BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006380
(647 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449448446|ref|XP_004141977.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 598
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/667 (59%), Positives = 464/667 (69%), Gaps = 94/667 (14%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEE------EEEEE 54
M+FDEY+YLEK VEEQ DD + K K E++E+S RKRE EE E+EE
Sbjct: 1 MDFDEYDYLEKAVEEQ-----DDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEV 55
Query: 55 KSRSGKRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRE 114
K KRSR + ENG + DRD R ++RHRRDR+ + D G+ER++E R RER
Sbjct: 56 KV---KRSR--SEHENG-KEDRDHS-GRARDRHRRDREEETDGGKERDKERNRTRERGSS 108
Query: 115 RR---------------EKEKERER-RERRDREKERERERDGERRSSSRSRRSSSQSRRS 158
+ KEKERER ++R+D+E++RER ++ +R R + +
Sbjct: 109 EKERERDRDREERDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEREREKE 168
Query: 159 SSRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPER 218
+ R R+RE E R R R +RERER++++RESRR KEKK+ EPEADPER
Sbjct: 169 KEKERERRDRERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPER 228
Query: 219 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLH 278
DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG
Sbjct: 229 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG------------- 275
Query: 279 SCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALS 338
++F+ D MSVPMAIALS
Sbjct: 276 --------YVEFY-----------------------------------DAMSVPMAIALS 292
Query: 339 GQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLF 398
GQLLLGQPVMVKPSEAEKNLVQSNT+ G + GPYGA+DRKLYVGNLHFNMTET LR++F
Sbjct: 293 GQLLLGQPVMVKPSEAEKNLVQSNTT-GASGAGPYGAVDRKLYVGNLHFNMTETHLREIF 351
Query: 399 EPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDH 458
E FGPVELVQLPLD+E+G CKGFGFVQFA LEHAKAAQS LNGKLEI GRT+KVSSVTDH
Sbjct: 352 EAFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQS-LNGKLEIAGRTIKVSSVTDH 410
Query: 459 VGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVN 518
+G Q++ AKS D DDD+GGGLALNAQSRALLMQKLDRTGIATSIAGSLG AP +NGSA N
Sbjct: 411 IGAQESVAKSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLG-APVLNGSAPN 469
Query: 519 QQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQ 578
Q++ SLPV GQ AV P + A P + + +GSPSECLLLKNMFDP+ ET PDFD+EI+
Sbjct: 470 QRSTSLPVNGQAAVAAPVLPANFTPPV-LQSVGSPSECLLLKNMFDPSTETAPDFDMEIK 528
Query: 579 GDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKP 638
DVEEECSKYGRVKHIYVDK SAG VYL++++ EAA +AQRAMH+RWFA R IS +FM+P
Sbjct: 529 EDVEEECSKYGRVKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQP 588
Query: 639 EDYEAKF 645
+ YEAKF
Sbjct: 589 QVYEAKF 595
>gi|449497695|ref|XP_004160482.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 598
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/667 (59%), Positives = 463/667 (69%), Gaps = 94/667 (14%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEE------EEEEE 54
M+FDEY+YLEK VEEQ DD + K K E++E+S RKRE EE E+EE
Sbjct: 1 MDFDEYDYLEKAVEEQ-----DDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEV 55
Query: 55 KSRSGKRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRE 114
K KRSR + ENG + DRD R ++RHRRDR+ + D G+ER++E R RER
Sbjct: 56 KV---KRSR--SEHENG-KEDRDHS-GRARDRHRRDREEETDGGKERDKERNRTRERGSS 108
Query: 115 RR---------------EKEKERER-RERRDREKERERERDGERRSSSRSRRSSSQSRRS 158
+ KEKERER ++R+D+E++RER ++ +R R + +
Sbjct: 109 EKERERDRDREERDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEREREKE 168
Query: 159 SSRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPER 218
+ R R+RE E R R R +RERER++++RESRR KEKK EPEADPER
Sbjct: 169 KEKERERRDRERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKGTTEPEADPER 228
Query: 219 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLH 278
DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG
Sbjct: 229 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG------------- 275
Query: 279 SCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALS 338
++F+ D MSVPMAIALS
Sbjct: 276 --------YVEFY-----------------------------------DAMSVPMAIALS 292
Query: 339 GQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLF 398
GQLLLGQPVMVKPSEAEKNLVQSNT+ G + GPYGA+DRKLYVGNLHFNMTET LR++F
Sbjct: 293 GQLLLGQPVMVKPSEAEKNLVQSNTT-GASGAGPYGAVDRKLYVGNLHFNMTETHLREIF 351
Query: 399 EPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDH 458
E FGPVELVQLPLD+E+G CKGFGFVQFA LEHAKAAQS LNGKLEI GRT+KVSSVTDH
Sbjct: 352 EAFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQS-LNGKLEIAGRTIKVSSVTDH 410
Query: 459 VGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVN 518
+G Q++ AKS D DDD+GGGLALNAQSRALLMQKLDRTGIATSIAGSLG AP +NGSA N
Sbjct: 411 IGAQESVAKSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLG-APVLNGSAPN 469
Query: 519 QQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQ 578
Q++ SLPV GQ AV P + A P + + +GSPSECLLLKNMFDP+ ET PDFD+EI+
Sbjct: 470 QRSTSLPVNGQAAVAAPVLPANFTPPV-LQSVGSPSECLLLKNMFDPSTETAPDFDMEIK 528
Query: 579 GDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKP 638
DVEEECSKYGRVKHIYVDK SAG VYL++++ EAA +AQRAMH+RWFA R IS +FM+P
Sbjct: 529 EDVEEECSKYGRVKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQP 588
Query: 639 EDYEAKF 645
+ YEAKF
Sbjct: 589 QVYEAKF 595
>gi|357519763|ref|XP_003630170.1| RNA-binding protein [Medicago truncatula]
gi|355524192|gb|AET04646.1| RNA-binding protein [Medicago truncatula]
Length = 567
Score = 638 bits (1646), Expect = e-180, Method: Compositional matrix adjust.
Identities = 386/656 (58%), Positives = 446/656 (67%), Gaps = 102/656 (15%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREE-KSERSYRKREDSEEEEEEEKSRSG 59
M+FDEYEYLEKTVEEQ +D DSS KK + KSER+YRK ++ + E RS
Sbjct: 1 MDFDEYEYLEKTVEEQ---PEDKDSSKKKNTDITDIKSERTYRKHGIDDDLDGGEDRRS- 56
Query: 60 KRSRRDEDEENGSRRDRDRDRDRDKERHR------RDRDRDRDRG-RERERETERDRERS 112
KRSR +DE NGS++DRDRDRDR+++R R R+RD +RG RE+ERE + +R
Sbjct: 57 KRSRGGDDE-NGSKKDRDRDRDRERDREHRERSSGRHRERDGERGSREKEREKDVERGGR 115
Query: 113 RERREKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESER 172
+ R++E+E+ER R ++ RD ER R + R S SR ER+R
Sbjct: 116 DKERDREREKERERRDKEREKERERRDKEREKERAEREKEEKERPRRSMSRPERDR---- 171
Query: 173 ERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKA 232
ERD E R+ RR+++KKE VEPEADPERDQRTVFAYQMPLKA
Sbjct: 172 ------------------GERDFENRDGRRFRDKKENVEPEADPERDQRTVFAYQMPLKA 213
Query: 233 TERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFL 292
TERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG I+F+
Sbjct: 214 TERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG---------------------YIEFY- 251
Query: 293 VAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPS 352
D MSVPMAIALSGQLLLGQPVMVKPS
Sbjct: 252 ----------------------------------DAMSVPMAIALSGQLLLGQPVMVKPS 277
Query: 353 EAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLD 412
EAEKNLVQSN S+G GPYGA+DRKLYVGNLHFNMTE LR++FEPFG +E+VQLPLD
Sbjct: 278 EAEKNLVQSNASSGAAVVGPYGAVDRKLYVGNLHFNMTEANLREIFEPFGQIEVVQLPLD 337
Query: 413 IETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFD 472
+ETG CKGFGFVQFA LEHAKAAQS LNGKLEI GRT+KVSSVTDHVG+QDT KSADFD
Sbjct: 338 METGHCKGFGFVQFAHLEHAKAAQS-LNGKLEIAGRTIKVSSVTDHVGSQDTTTKSADFD 396
Query: 473 DDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAV 532
DD+ GGL LNA SRALLMQ+L T I TSI P VNGS QQA S+P G P V
Sbjct: 397 DDE-GGLTLNAHSRALLMQRLAGTDITTSIG-----VPTVNGSVPVQQAFSMP-FGNPGV 449
Query: 533 PVPAVTAP--VIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGR 590
+PA P V+P AE +G PSECLLLKNMFDP+ E +PDFD++I+ DVEEECSKYGR
Sbjct: 450 -IPASVLPTQVMPTPVAEPVGIPSECLLLKNMFDPSTEIEPDFDIDIKEDVEEECSKYGR 508
Query: 591 VKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKFK 646
V HIYVDKRSAGFVYL+FE+ EA+++AQRAMHMRWFARRLI+AIFM+P YEAKFK
Sbjct: 509 VMHIYVDKRSAGFVYLQFETVEASSAAQRAMHMRWFARRLITAIFMQPHLYEAKFK 564
>gi|297811089|ref|XP_002873428.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319265|gb|EFH49687.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 520
Score = 623 bits (1607), Expect = e-176, Method: Compositional matrix adjust.
Identities = 371/652 (56%), Positives = 422/652 (64%), Gaps = 137/652 (21%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEE----EEKS 56
MEFDEYEYLEKTVEE D S+ K++ EKSERSYRKRE E +E EE+
Sbjct: 1 MEFDEYEYLEKTVEE------GDGSNKNKESSGNEKSERSYRKREGGERHDEEGGDEERG 54
Query: 57 RSGKRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERR 116
S + R + EENG R ERHR RD+DR+ R++ RE RD+E RER
Sbjct: 55 SSRSKKSRGDGEENGKR-----------ERHRSSRDKDRE--RDKVREGSRDKESDRERS 101
Query: 117 EKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSR-SRRERERESERERE 175
KE R+R DR+K R+RER R SS R + R R SRR ++++ E
Sbjct: 102 SKE-----RDRSDRDKTRDRERRERERRSSSRSRREEREREVVERGSRRHKDKKDE---- 152
Query: 176 LELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATER 235
PEADPERDQRTVFAYQMPLKATER
Sbjct: 153 ------------------------------------PEADPERDQRTVFAYQMPLKATER 176
Query: 236 DVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAE 295
DVYEFFSKAGKVRDVRLIMDRNSRRSKGVG I+F+
Sbjct: 177 DVYEFFSKAGKVRDVRLIMDRNSRRSKGVG---------------------YIEFY---- 211
Query: 296 VGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAE 355
DVMSVPMAIALSGQ LGQPVMVKPSEAE
Sbjct: 212 -------------------------------DVMSVPMAIALSGQPFLGQPVMVKPSEAE 240
Query: 356 KNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIET 415
KNL QSNT+ GGT G +DRKLYVGNLHFNMTE QLR++FE FGPVELVQLPLD ET
Sbjct: 241 KNLAQSNTTPGGT-----GPVDRKLYVGNLHFNMTELQLRQIFEAFGPVELVQLPLDPET 295
Query: 416 GQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDD 475
GQCKGFGF+QFAQLEH+KAAQ +LNGKLEI GRT+KVSSV+DH+GTQD A KSADFDDDD
Sbjct: 296 GQCKGFGFIQFAQLEHSKAAQISLNGKLEIAGRTIKVSSVSDHIGTQDAAPKSADFDDDD 355
Query: 476 GGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVP 535
GGGLALNAQSRALLMQKLDR+GIATSI GSLGV P +NG+A NQ ++ P+ P P
Sbjct: 356 GGGLALNAQSRALLMQKLDRSGIATSIVGSLGV-PGLNGAAFNQPGMN------PSFPTP 408
Query: 536 AVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIY 595
+ IP+ E +G PSECLLLKNMFDPA ET+ DFD EI+ DV +ECSKYG V HIY
Sbjct: 409 VLPTTAIPSFVNEPVGQPSECLLLKNMFDPATETERDFDFEIREDVADECSKYGEVNHIY 468
Query: 596 VDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKFKS 647
VDK SAGFVYLRF+S EAA +AQRAMHMRWFA+++ISA FM P +YEAK K+
Sbjct: 469 VDKNSAGFVYLRFQSVEAAVAAQRAMHMRWFAQKMISATFMPPHEYEAKAKA 520
>gi|296082546|emb|CBI21551.3| unnamed protein product [Vitis vinifera]
Length = 504
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 326/486 (67%), Positives = 366/486 (75%), Gaps = 82/486 (16%)
Query: 165 ERERES-ERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTV 223
+R+RE ER RE+E RESRR+K+KKE VEPEADPERDQRTV
Sbjct: 94 DRDRELRERSREIE-------------------PRESRRFKDKKEAVEPEADPERDQRTV 134
Query: 224 FAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLIN 283
FAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG
Sbjct: 135 FAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG------------------ 176
Query: 284 SCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLL 343
I+F+ D MSVPMAIALSG LL
Sbjct: 177 ---YIEFY-----------------------------------DAMSVPMAIALSGHLLH 198
Query: 344 GQPVMVKPSEAEKNLVQSNTS---AGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEP 400
GQPVMVKPSEAEKNLVQSN S +GG A GPYGA+DRKLYVGNLHFNMTE QLR++FEP
Sbjct: 199 GQPVMVKPSEAEKNLVQSNASGAVSGGIA-GPYGAVDRKLYVGNLHFNMTELQLRQIFEP 257
Query: 401 FGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVG 460
FG VELVQLPLD+ETGQCKGFGFVQFA+LEHAKAAQ+ LNGKL+I GR +KVSSVTDH+G
Sbjct: 258 FGRVELVQLPLDLETGQCKGFGFVQFAELEHAKAAQN-LNGKLDIAGRIIKVSSVTDHIG 316
Query: 461 TQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQ 520
QD AK+ADFDDDDGGGL+LNAQSRALLMQKLDRTGIA+SIAGSLGV P +NGSA NQQ
Sbjct: 317 VQDAGAKAADFDDDDGGGLSLNAQSRALLMQKLDRTGIASSIAGSLGV-PMLNGSAPNQQ 375
Query: 521 AISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGD 580
AISL + GQ AV PA+ V+ + A+E +G+P+ECLLLKNMFDPA E DPDFDL+I+ +
Sbjct: 376 AISLSINGQAAVSAPALPTQVVTSPASEPVGTPTECLLLKNMFDPATEIDPDFDLDIKEE 435
Query: 581 VEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPED 640
V+EECS +GRVKHIYV+K SAG+VYLRFE+ EAA +AQRAMHMRWFARRLISAIF++P D
Sbjct: 436 VQEECSNFGRVKHIYVEKHSAGYVYLRFETVEAAVTAQRAMHMRWFARRLISAIFLQPRD 495
Query: 641 YEAKFK 646
YEAKFK
Sbjct: 496 YEAKFK 501
>gi|28059803|gb|AAO30095.1| splicing factor-like protein [Arabidopsis thaliana]
Length = 527
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 370/652 (56%), Positives = 426/652 (65%), Gaps = 130/652 (19%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
MEFDEYEYLEKTVEE S+ KK+ E+SERSYRKRE E + EE
Sbjct: 1 MEFDEYEYLEKTVEE------GAGSNKKKEESGNERSERSYRKREGVERQGEEGGEEERV 54
Query: 61 RSR----RDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERR 116
SR R + EENG + RDR+R++ R RD+DR+RD+
Sbjct: 55 SSRSKKSRGDGEENGGGK---RDRERERHRSSRDKDRERDK------------------- 92
Query: 117 EKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESEREREL 176
R RD+E +RER SS + RS R+RER +R
Sbjct: 93 ------VREGSRDKESDRER--------------SSKERDRSDRDKPRDRERREREKRSS 132
Query: 177 ELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERD 236
R E+E E+ ER SRR+++KK+ EPEADPERDQRTVFAYQMPLKATERD
Sbjct: 133 SRSRREEKEPEVVERG-------SRRHRDKKD--EPEADPERDQRTVFAYQMPLKATERD 183
Query: 237 VYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEV 296
VYEFFSKAGKVRDVRLIMDRNSRRSKGVG I+F+
Sbjct: 184 VYEFFSKAGKVRDVRLIMDRNSRRSKGVG---------------------YIEFY----- 217
Query: 297 GMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEK 356
DVMSVPMAIALSGQL LGQPVMVKPSEAEK
Sbjct: 218 ------------------------------DVMSVPMAIALSGQLFLGQPVMVKPSEAEK 247
Query: 357 NLVQSN-TSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIET 415
NL QSN T+ GGT G DRKLYVGNLHFNM+E QLR++FE FGPVELVQLPLD ET
Sbjct: 248 NLAQSNSTTVGGT-----GPADRKLYVGNLHFNMSELQLRQIFEAFGPVELVQLPLDPET 302
Query: 416 GQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDD 475
GQCKGFGF+QF QLEH+KAAQ ALNGKLEI GRT+KVSSV+DH+GTQD+A KSADFDDDD
Sbjct: 303 GQCKGFGFIQFVQLEHSKAAQIALNGKLEIAGRTIKVSSVSDHIGTQDSAPKSADFDDDD 362
Query: 476 GGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVP 535
GGGLALNAQSRA+LMQKLDR+GIATSI GSLGV P +NG+A NQ ++ P+ P
Sbjct: 363 GGGLALNAQSRAMLMQKLDRSGIATSIVGSLGV-PGLNGAAFNQPGMN------PSFPTS 415
Query: 536 AVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIY 595
+ IP+ E +G PSECLLLKNMFDPA ET+P+FDLEI+ DV +ECSKYG V HIY
Sbjct: 416 VLPTTAIPSFVNEHVGLPSECLLLKNMFDPATETEPNFDLEIRDDVADECSKYGPVNHIY 475
Query: 596 VDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKFKS 647
VDK SAGFVYLRF+S EAAA+AQRAMHMRWFA+++ISA FM P +YEAK K+
Sbjct: 476 VDKNSAGFVYLRFQSVEAAAAAQRAMHMRWFAQKMISATFMPPHEYEAKAKA 527
>gi|356512787|ref|XP_003525097.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 554
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 378/653 (57%), Positives = 443/653 (67%), Gaps = 109/653 (16%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
M+FDEYEYLEKTVEE + SSKKK +KSERSYRK +++ + R K
Sbjct: 1 MDFDEYEYLEKTVEEDIDK-----DSSKKKKDITDKSERSYRKPR-DVDDDLDADDRKSK 54
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKE------RHRRDRDRDRDRGRERERETERDRERSRE 114
RSR D DE GS++DRDRDR+RD++ RHR +R+RD +R + RD+++ ++
Sbjct: 55 RSRGD-DENGGSKKDRDRDRERDRDRERSSGRHRSERERDGERKDRDKDRERRDKDKDKD 113
Query: 115 RREKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERER 174
R R+R DREKERER RD +++ERE E+E
Sbjct: 114 RDRDRDRRDRDRDGDREKERER-RD------------------------KDKEREGEKEA 148
Query: 175 ELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATE 234
R R R R+RERD EMR+ RR++ KKE EPEADPERDQRTVFAYQMPLKATE
Sbjct: 149 RERSTRSRSRSERDRDRERDFEMRDGRRFRVKKEASEPEADPERDQRTVFAYQMPLKATE 208
Query: 235 RDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVA 294
RDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG I+F+
Sbjct: 209 RDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG---------------------YIEFY--- 244
Query: 295 EVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEA 354
D MSVPMAIALSGQLLLGQPVMVKPSEA
Sbjct: 245 --------------------------------DAMSVPMAIALSGQLLLGQPVMVKPSEA 272
Query: 355 EKNLVQSN-TSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDI 413
EKNLVQSN + GPYGA+DRKLYVGNLHFNMTE+QLR++FEPFGPVE+VQLPLD+
Sbjct: 273 EKNLVQSNASGGAAGVAGPYGAVDRKLYVGNLHFNMTESQLREIFEPFGPVEVVQLPLDL 332
Query: 414 ETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDD 473
ETG CKGFGFVQF LEHAKAAQS LNGKLEI GRT+KVS VTDHV +QD AKSAD DD
Sbjct: 333 ETGHCKGFGFVQFTHLEHAKAAQS-LNGKLEIAGRTIKVSCVTDHVASQDATAKSADLDD 391
Query: 474 DDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVP 533
D+ GGL LNA SRALLMQ+L A + S+G+ P VNGS QQAISLP +G P +P
Sbjct: 392 DE-GGLTLNAHSRALLMQRL-----AGADPASIGL-PVVNGSVPAQQAISLP-IGAPVLP 443
Query: 534 VPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKH 593
V+PN E +G+PSECLLLKNMFDP+ ET+PDFD++I+ DVEEECSKYGRVKH
Sbjct: 444 T-----LVMPNPVVEPVGNPSECLLLKNMFDPSTETEPDFDIDIKEDVEEECSKYGRVKH 498
Query: 594 IYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKFK 646
I+VDK+SAGFVYLRF++ EAA++AQ AMH+RWFARRLISA+FM+PE YEAKFK
Sbjct: 499 IFVDKKSAGFVYLRFDTVEAASAAQHAMHLRWFARRLISAVFMQPELYEAKFK 551
>gi|18416114|ref|NP_568220.1| RNA-binding protein 39 [Arabidopsis thaliana]
gi|15451046|gb|AAK96794.1| splicing factor-like protein [Arabidopsis thaliana]
gi|332004077|gb|AED91460.1| RNA-binding protein 39 [Arabidopsis thaliana]
Length = 527
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 370/653 (56%), Positives = 427/653 (65%), Gaps = 132/653 (20%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEK----- 55
MEFDEYEYLEKTVEE S+ KK+ E+SERSYRKRE E + EE
Sbjct: 1 MEFDEYEYLEKTVEE------GAGSNKKKEESGNERSERSYRKREGGERQGEEGGEEERV 54
Query: 56 SRSGKRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRER 115
S K+SR D +E G +RDR+R+ + R RD+DR+RD+
Sbjct: 55 SSRSKKSRGDGEENGGGKRDRERE----RHRSSRDKDRERDK------------------ 92
Query: 116 REKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERE 175
R RD+E +RER SS + RS R+RER +R
Sbjct: 93 -------VREGSRDKESDRER--------------SSKERDRSDRDKPRDRERREREKRS 131
Query: 176 LELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATER 235
R E+E E+ ER SRR+++KK+ EPEADPERDQRTVFAYQMPLKATER
Sbjct: 132 SSRSRREEKEPEVVERG-------SRRHRDKKD--EPEADPERDQRTVFAYQMPLKATER 182
Query: 236 DVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAE 295
DVYEFFSKAGKVRDVRLIMDRNSRRSKGVG I+F+
Sbjct: 183 DVYEFFSKAGKVRDVRLIMDRNSRRSKGVG---------------------YIEFY---- 217
Query: 296 VGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAE 355
DVMSVPMAIALSGQL LGQPVMVKPSEAE
Sbjct: 218 -------------------------------DVMSVPMAIALSGQLFLGQPVMVKPSEAE 246
Query: 356 KNLVQSN-TSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIE 414
KNL QSN T+ GGT G DRKLYVGNLHFNM+E QLR++FE FGPVELVQLPLD E
Sbjct: 247 KNLAQSNSTTVGGT-----GPADRKLYVGNLHFNMSELQLRQIFEAFGPVELVQLPLDPE 301
Query: 415 TGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDD 474
TGQCKGFGF+QF QLEH+KAAQ ALNGKLEI GRT+KVSSV+DH+GTQD+A KSADFDDD
Sbjct: 302 TGQCKGFGFIQFVQLEHSKAAQIALNGKLEIAGRTIKVSSVSDHIGTQDSAPKSADFDDD 361
Query: 475 DGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPV 534
DGGGLALNAQSRA+LMQKLDR+GIATSI GSLGV P +NG+A NQ ++ P+ P
Sbjct: 362 DGGGLALNAQSRAMLMQKLDRSGIATSIVGSLGV-PGLNGAAFNQPGMN------PSFPT 414
Query: 535 PAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHI 594
+ IP+ E +G PSECLLLKNMFDPA ET+P+FDLEI+ DV +ECSKYG V HI
Sbjct: 415 SVLPTTAIPSFVNEHVGLPSECLLLKNMFDPATETEPNFDLEIRDDVADECSKYGPVNHI 474
Query: 595 YVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKFKS 647
YVDK SAGFVYLRF+S EAAA+AQRAMHMRWFA+++ISA FM P +YEAK K+
Sbjct: 475 YVDKNSAGFVYLRFQSVEAAAAAQRAMHMRWFAQKMISATFMPPHEYEAKAKA 527
>gi|147856399|emb|CAN82467.1| hypothetical protein VITISV_002664 [Vitis vinifera]
Length = 461
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 330/529 (62%), Positives = 375/529 (70%), Gaps = 76/529 (14%)
Query: 121 ERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELER 180
E E E+ E E +++DG +S RS R R E R RER
Sbjct: 5 EYEYLEKAVEEPENRKKKDGGEKSE-RSYRKREGGEEDDDDERGEGRRSKRRERH----- 58
Query: 181 ERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEF 240
E++R R R+ ER+ + RR+K+KKE VEPEADPERDQRTVFAYQMPLKATERDVYEF
Sbjct: 59 EKDRRRSGRDGERE---SKGRRFKDKKEAVEPEADPERDQRTVFAYQMPLKATERDVYEF 115
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVF 300
FSKAGKVRDVRLIMDRNSRRSKGVG I+F+
Sbjct: 116 FSKAGKVRDVRLIMDRNSRRSKGVG---------------------YIEFY--------- 145
Query: 301 FLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQ 360
D MSVPMAIALSG LL GQPVMVKPSEAEKNLVQ
Sbjct: 146 --------------------------DAMSVPMAIALSGHLLHGQPVMVKPSEAEKNLVQ 179
Query: 361 SNTSAG--GTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQC 418
SN S G GPYGA+DRKLYVGNLHFNMTE QLR++FEPFG VELVQLPLD+ETGQC
Sbjct: 180 SNASGAVSGGIAGPYGAVDRKLYVGNLHFNMTELQLRQIFEPFGRVELVQLPLDLETGQC 239
Query: 419 KGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGG 478
KGFGFVQFA+LEHAKAAQ+ LNGKL+I GR +KVSSVTDH+G QD AK+ADFDDDDGGG
Sbjct: 240 KGFGFVQFAELEHAKAAQN-LNGKLDIAGRIIKVSSVTDHIGVQDAGAKAADFDDDDGGG 298
Query: 479 LALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVT 538
L+LNAQSRALLMQKLDRT GSLGV P +NGSA NQQAISL + GQ AV PA+
Sbjct: 299 LSLNAQSRALLMQKLDRT-------GSLGV-PMLNGSAPNQQAISLSINGQAAVSAPALP 350
Query: 539 APVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDK 598
V+ + A+E +G+P+ECLLLKNMFDPA E DPDFDL+I+ +V+EECS +GRVKHIYV+K
Sbjct: 351 TQVVTSPASEPVGTPTECLLLKNMFDPATEIDPDFDLDIKEEVQEECSNFGRVKHIYVEK 410
Query: 599 RSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKFKS 647
SAG+VYLRFE+ EAA +AQRAMHMRWFARRLISAIF++P DYEAKFK
Sbjct: 411 HSAGYVYLRFETVEAAVTAQRAMHMRWFARRLISAIFLQPRDYEAKFKG 459
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 61/109 (55%), Gaps = 14/109 (12%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
M+FDEYEYLEK VEE +K+ D EKSERSYRKRE EE++++E+ +
Sbjct: 1 MDFDEYEYLEKAVEEPENRKKKDGG---------EKSERSYRKREGGEEDDDDERGEGRR 51
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDR 109
RR+ E++ R RD +R+ R +D+ E E + ERD+
Sbjct: 52 SKRRERHEKDRRRSGRDGERESKGRRF-----KDKKEAVEPEADPERDQ 95
>gi|9758966|dbj|BAB09409.1| splicing factor-like protein [Arabidopsis thaliana]
Length = 604
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 361/642 (56%), Positives = 418/642 (65%), Gaps = 132/642 (20%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEK----- 55
MEFDEYEYLEKTVEE S+ KK+ E+SERSYRKRE E + EE
Sbjct: 1 MEFDEYEYLEKTVEE------GAGSNKKKEESGNERSERSYRKREGGERQGEEGGEEERV 54
Query: 56 SRSGKRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRER 115
S K+SR D +E G +RDR+R+ + R RD+DR+RD+
Sbjct: 55 SSRSKKSRGDGEENGGGKRDRERE----RHRSSRDKDRERDK------------------ 92
Query: 116 REKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERE 175
RE R++E D ER S R R S R++ R+ ER
Sbjct: 93 -------------VREGSRDKESDRERSSKERDR------------SDRDKPRDRERRER 127
Query: 176 LELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATER 235
E+ E+E ++ R SRR+++KK+ EPEADPERDQRTVFAYQMPLKATER
Sbjct: 128 ---EKRSSSRSRREEKEPEVVERGSRRHRDKKD--EPEADPERDQRTVFAYQMPLKATER 182
Query: 236 DVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAE 295
DVYEFFSKAGKVRDVRLIMDRNSRRSKGVG I+F+
Sbjct: 183 DVYEFFSKAGKVRDVRLIMDRNSRRSKGVG---------------------YIEFY---- 217
Query: 296 VGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAE 355
DVMSVPMAIALSGQL LGQPVMVKPSEAE
Sbjct: 218 -------------------------------DVMSVPMAIALSGQLFLGQPVMVKPSEAE 246
Query: 356 KNLVQSN-TSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIE 414
KNL QSN T+ GGT G DRKLYVGNLHFNM+E QLR++FE FGPVELVQLPLD E
Sbjct: 247 KNLAQSNSTTVGGT-----GPADRKLYVGNLHFNMSELQLRQIFEAFGPVELVQLPLDPE 301
Query: 415 TGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDD 474
TGQCKGFGF+QF QLEH+KAAQ ALNGKLEI GRT+KVSSV+DH+GTQD+A KSADFDDD
Sbjct: 302 TGQCKGFGFIQFVQLEHSKAAQIALNGKLEIAGRTIKVSSVSDHIGTQDSAPKSADFDDD 361
Query: 475 DGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPV 534
DGGGLALNAQSRA+LMQKLDR+GIATSI GSLGV P +NG+A NQ ++ P+ P
Sbjct: 362 DGGGLALNAQSRAMLMQKLDRSGIATSIVGSLGV-PGLNGAAFNQPGMN------PSFPT 414
Query: 535 PAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHI 594
+ IP+ E +G PSECLLLKNMFDPA ET+P+FDLEI+ DV +ECSKYG V HI
Sbjct: 415 SVLPTTAIPSFVNEHVGLPSECLLLKNMFDPATETEPNFDLEIRDDVADECSKYGPVNHI 474
Query: 595 YVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFM 636
YVDK SAGFVYLRF+S EAAA+AQRAMHMRWFA+++ISA FM
Sbjct: 475 YVDKNSAGFVYLRFQSVEAAAAAQRAMHMRWFAQKMISATFM 516
>gi|10334491|emb|CAC10207.1| putative splicing factor [Cicer arietinum]
Length = 392
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 290/453 (64%), Positives = 325/453 (71%), Gaps = 64/453 (14%)
Query: 196 EMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
E R+ RR+++KK+ VEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD
Sbjct: 1 ENRDGRRFRDKKDNVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 60
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKGVG I+F+
Sbjct: 61 RNSRRSKGVG---------------------YIEFY------------------------ 75
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTA-TGPYG 374
D MSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN ++G TGPYG
Sbjct: 76 -----------DAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNATSGAAGVTGPYG 124
Query: 375 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 434
A+DRKLYVGNLHFNMTE LR++FEPFG +E+VQLPLD+ETG CKGFGFVQFA LEHAKA
Sbjct: 125 AVDRKLYVGNLHFNMTEANLREIFEPFGQIEVVQLPLDMETGHCKGFGFVQFAHLEHAKA 184
Query: 435 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLD 494
+ S K+ K SSVTDHVG+QDT AKSADFDDD+ GGL LNA SRALLMQ+L
Sbjct: 185 S-SEFKWKIGDCWPNNKGSSVTDHVGSQDTTAKSADFDDDE-GGLTLNAHSRALLMQRLA 242
Query: 495 RTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPS 554
I TSI P VNG QQA SLP+ +P + A V+P E +G PS
Sbjct: 243 GADIPTSIG-----VPMVNGPVPVQQAFSLPIGNPGVIPAQVLPAQVMPTPVVEPVGVPS 297
Query: 555 ECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAA 614
ECLLLKNMFDP+ ET+PDFDL+I+ DVEEECSKYGRVKHIYVDKRSAGFVYLRFE+ EA+
Sbjct: 298 ECLLLKNMFDPSTETEPDFDLDIKEDVEEECSKYGRVKHIYVDKRSAGFVYLRFETVEAS 357
Query: 615 ASAQRAMHMRWFARRLISAIFMKPEDYEAKFKS 647
++AQRAMHMRWFARRLI+AIFM+P YEAKFK
Sbjct: 358 SAAQRAMHMRWFARRLITAIFMQPHLYEAKFKG 390
>gi|224094981|ref|XP_002310314.1| predicted protein [Populus trichocarpa]
gi|222853217|gb|EEE90764.1| predicted protein [Populus trichocarpa]
Length = 391
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 306/438 (69%), Positives = 331/438 (75%), Gaps = 59/438 (13%)
Query: 201 RRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
RR+KEKKEVVEPEADPERDQRTVF YQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR
Sbjct: 1 RRFKEKKEVVEPEADPERDQRTVFVYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 60
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKGVG ++F+ V M L
Sbjct: 61 SKGVG---------------------YVEFYDAMSVPMAITL------------------ 81
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTS--AGGTATGPYGAIDR 378
SGQLLLGQPVMVKPSEAEKNLVQ + S G TGP+GA+DR
Sbjct: 82 -----------------SGQLLLGQPVMVKPSEAEKNLVQPSASGGGTGGVTGPFGAVDR 124
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
KLYVGNLHFNMTE QLR+LFEPFG VELVQLPLD+ETGQCKGFGFVQF QLE+AKAAQSA
Sbjct: 125 KLYVGNLHFNMTEMQLRQLFEPFGIVELVQLPLDLETGQCKGFGFVQFTQLENAKAAQSA 184
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGI 498
LNGKLEI GRT+KVSSVT+H G QD+ KSADFDDDDGGGLALNAQSRALLMQKLDRTG
Sbjct: 185 LNGKLEIAGRTIKVSSVTEHGGQQDSGVKSADFDDDDGGGLALNAQSRALLMQKLDRTGT 244
Query: 499 ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLL 558
ATSIAGSLGV P +NGSA NQQAISLPV GQ + A A V+P+ A E IG PSECLL
Sbjct: 245 ATSIAGSLGV-PLLNGSAPNQQAISLPVNGQTNIGAAAFPALVLPSPAYESIGQPSECLL 303
Query: 559 LKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQ 618
LKNMFDPA ET+PDFDL+I+ DVEEECS+YG+VKHI+VDK SAG VYL+F+S EAAA AQ
Sbjct: 304 LKNMFDPATETEPDFDLDIKEDVEEECSRYGQVKHIWVDKNSAGHVYLQFDSMEAAARAQ 363
Query: 619 RAMHMRWFARRLISAIFM 636
RAMHMRWFARR I AIFM
Sbjct: 364 RAMHMRWFARRSILAIFM 381
>gi|227206234|dbj|BAH57172.1| AT5G09880 [Arabidopsis thaliana]
Length = 505
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 313/521 (60%), Positives = 360/521 (69%), Gaps = 88/521 (16%)
Query: 145 SSRSRRSSSQSRRSSSRSRRERERESERERELELERERERE-----------------RE 187
SSRS++S + R R+ + ER++ RE
Sbjct: 55 SSRSKKSRGDGEENGGGKRDRERERHRSSRDKDRERDKVREGSRDKERREREKRSSSRSR 114
Query: 188 LRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKV 247
E+E ++ R SRR+++KK+ EPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKV
Sbjct: 115 REEKEPEVVERGSRRHRDKKD--EPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKV 172
Query: 248 RDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDET 307
RDVRLIMDRNSRRSKGVG I+F+
Sbjct: 173 RDVRLIMDRNSRRSKGVG---------------------YIEFY---------------- 195
Query: 308 YTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN-TSAG 366
DVMSVPMAIALSGQL LGQPVMVKPSEAEKNL QSN T+ G
Sbjct: 196 -------------------DVMSVPMAIALSGQLFLGQPVMVKPSEAEKNLAQSNSTTVG 236
Query: 367 GTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF 426
GT G DRKLYVGNLHFNM+E QLR++FE FGPVELVQLPLD ETGQCKGFGF+QF
Sbjct: 237 GT-----GPADRKLYVGNLHFNMSELQLRQIFEAFGPVELVQLPLDPETGQCKGFGFIQF 291
Query: 427 AQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSR 486
QLEH+KAAQ ALNGKLEI GRT+KVSSV+DH+GTQD+A KSADFDDDDGGGLALNAQSR
Sbjct: 292 VQLEHSKAAQIALNGKLEIAGRTIKVSSVSDHIGTQDSAPKSADFDDDDGGGLALNAQSR 351
Query: 487 ALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMA 546
A+LMQKLDR+GIATSI GSLGV P +NG+A NQ ++ P+ P + IP+
Sbjct: 352 AMLMQKLDRSGIATSIVGSLGV-PGLNGAAFNQPGMN------PSFPTSVLPTTAIPSFV 404
Query: 547 AEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYL 606
E +G PSECLLLKNMFDPA ET+P+FDLEI+ DV +ECSKYG V HIYVDK SAGFVYL
Sbjct: 405 NEHVGLPSECLLLKNMFDPATETEPNFDLEIRDDVADECSKYGPVNHIYVDKNSAGFVYL 464
Query: 607 RFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKFKS 647
RF+S EAAA+AQRAMHMRWFA+++ISA FM P +YEAK K+
Sbjct: 465 RFQSVEAAAAAQRAMHMRWFAQKMISATFMPPHEYEAKAKA 505
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 86/154 (55%), Gaps = 23/154 (14%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEE------ 54
MEFDEYEYLEKTVEE S+ KK+ E+SERSYRKRE E + EE
Sbjct: 1 MEFDEYEYLEKTVEE------GAGSNKKKEESGNERSERSYRKREGGERQGEEGGEEERV 54
Query: 55 KSRSGKRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRE 114
SRS K+SR D +E G +RD R+R++ R RD+DR+RD+ RE R+ ER R
Sbjct: 55 SSRS-KKSRGDGEENGGGKRD----RERERHRSSRDKDRERDKVREGSRDKERREREKRS 109
Query: 115 RREKEKER------ERRERRDREKERERERDGER 142
+E ER RR R+K+ E E D ER
Sbjct: 110 SSRSRREEKEPEVVERGSRRHRDKKDEPEADPER 143
>gi|224081877|ref|XP_002306512.1| predicted protein [Populus trichocarpa]
gi|222855961|gb|EEE93508.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 281/421 (66%), Positives = 312/421 (74%), Gaps = 59/421 (14%)
Query: 228 MPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCV 287
MPLK TERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG
Sbjct: 1 MPLKVTERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG---------------------Y 39
Query: 288 IKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPV 347
++F+ V M L SGQLL GQPV
Sbjct: 40 VEFYDAMSVPMAIAL-----------------------------------SGQLLFGQPV 64
Query: 348 MVKPSEAEKNLVQ--SNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVE 405
MVKPSEAEKNLVQ +++ GP+G +DRKLYVGNLHFNMTE QLR+LFEPFG VE
Sbjct: 65 MVKPSEAEKNLVQSSASSGGTSGVAGPFGPVDRKLYVGNLHFNMTEMQLRQLFEPFGTVE 124
Query: 406 LVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTA 465
LVQLPLD+ETGQCKGFGFVQF QLE+AKAAQSALNGKLEI GRT+KVSSVT+H G QDT
Sbjct: 125 LVQLPLDLETGQCKGFGFVQFTQLENAKAAQSALNGKLEIAGRTIKVSSVTEHGGQQDTG 184
Query: 466 AKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLP 525
AKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGV P +NGSA NQQAISLP
Sbjct: 185 AKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGV-PLLNGSASNQQAISLP 243
Query: 526 VVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC 585
++GQ A+ A+ APV+ + A E IG PSECL+LKNMFDPA ET+PDFDL+I+ DVEEEC
Sbjct: 244 IIGQTAIGAAALPAPVLSSPAYEPIGQPSECLMLKNMFDPATETEPDFDLDIKEDVEEEC 303
Query: 586 SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
SKYG+V+HI+VDK S G VYLRF S EAAA AQRAMHMRWFARRLI A+FM +YEA+F
Sbjct: 304 SKYGQVEHIFVDKNSTGCVYLRFGSIEAAAGAQRAMHMRWFARRLILAVFMPTREYEARF 363
Query: 646 K 646
+
Sbjct: 364 Q 364
>gi|359475014|ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
Length = 609
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 338/688 (49%), Positives = 409/688 (59%), Gaps = 126/688 (18%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
M+FDEY+YLEKTVE QK + + + + + ERS + SE+ +++ R K
Sbjct: 1 MDFDEYDYLEKTVENPESQKVKETVNGGDETVKSGEKERSRSSKHKSEDNDDDLDRRL-K 59
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEK 120
RS+ +D RD DR ++RG R + RD ER R R +E
Sbjct: 60 RSKSGDDS--------------------RDHDRRKERGSSHPRSSSRDGERDRHRSSREH 99
Query: 121 ERERRERRDRE-----KERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERE 175
R+R KER+RE+D R R R R S R R
Sbjct: 100 RERDRDRDRDREERNGKERDREKDRNRERDRDRDRRERDRESERERERERERERSRRSRS 159
Query: 176 LELERERERERELRERERDLEMRESRR-------------YKEKKE-VVEPEADPERDQR 221
+ ER+ + RER RD E +E R +K+KKE V EPEADPERDQR
Sbjct: 160 RSEKHLSERDEKDRERSRDRENKEREREREIRERDRETRRHKDKKEEVAEPEADPERDQR 219
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCL 281
TVFAYQ+ LKA ERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVG
Sbjct: 220 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG---------------- 263
Query: 282 INSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQL 341
I+F+ D MSVPMAIALSGQ
Sbjct: 264 -----YIEFY-----------------------------------DAMSVPMAIALSGQP 283
Query: 342 LLGQPVMVKPSEAEKNLVQSNTSAGGTA---TGPYGAIDRKLYVGNLHFNMTETQLRKLF 398
LLGQPVMVKPSEAEKNLVQS T+A G GPY R+LYVGNLHFN+TE QLR++F
Sbjct: 284 LLGQPVMVKPSEAEKNLVQSTTAAAGGPGGLIGPYSGGARRLYVGNLHFNITEDQLRQVF 343
Query: 399 EPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDH 458
EPFG VELVQLP D+ETG CKGFGFVQFA+LE A+AAQS LNG+L+I GRT+KVS VTD
Sbjct: 344 EPFGTVELVQLPTDLETGHCKGFGFVQFARLEDARAAQS-LNGQLDIAGRTIKVSVVTDQ 402
Query: 459 VGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLG----------- 507
G QD A + DFDDD+GGGL+LNA+SRA+LMQKLDR+G IAGSLG
Sbjct: 403 AGLQDIGANAGDFDDDEGGGLSLNARSRAILMQKLDRSGTTPGIAGSLGSPVLNNPGLPL 462
Query: 508 -VAPAVNGSAVNQQAIS----LPVVGQPAVP-----VPAVTAPVIPNMAAEFIGSPSECL 557
AP + + V ++ PV G +P VPAVT P I + IG PSECL
Sbjct: 463 STAPILGAAPVVSPLVAPLVQAPVPGLAGLPGAGLQVPAVTVPSI-----DTIGVPSECL 517
Query: 558 LLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASA 617
+LKNMFDP +ET+PDFDL+I+ DV++ECSK+G VKHIYVDK SAGFV+LRFE+T+AA SA
Sbjct: 518 MLKNMFDPKLETEPDFDLDIKEDVQDECSKFGTVKHIYVDKNSAGFVFLRFENTQAAISA 577
Query: 618 QRAMHMRWFARRLISAIFMKPEDYEAKF 645
QRA+H RWFA ++I+A FM P++YEAKF
Sbjct: 578 QRALHGRWFAGKMITATFMLPQNYEAKF 605
>gi|356516321|ref|XP_003526844.1| PREDICTED: uncharacterized protein LOC100802446 [Glycine max]
Length = 549
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 247/328 (75%), Positives = 276/328 (84%), Gaps = 11/328 (3%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTAT-GPYGAIDRKL 380
YIEFYD MSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN ++G GPYGA+DRKL
Sbjct: 227 YIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNATSGAAGVVGPYGAVDRKL 286
Query: 381 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 440
YVGNLHFNMTE+QLR++FEPFGPVE+VQLPLD+ETG CKGFGFVQFA LEHAKAAQS LN
Sbjct: 287 YVGNLHFNMTESQLREIFEPFGPVEIVQLPLDLETGHCKGFGFVQFAHLEHAKAAQS-LN 345
Query: 441 GKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIAT 500
GKLEI GRT+KVSSVTDHVG QDT AKSADFDDD+GG L+LNAQSRALLMQKLDR+GIA
Sbjct: 346 GKLEIAGRTIKVSSVTDHVGNQDTTAKSADFDDDEGG-LSLNAQSRALLMQKLDRSGIAA 404
Query: 501 SIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPV--PAVTAPVIPNMAAEFIGSPSECLL 558
SI P NGS+ QQAI +P+ VP PAV ++P E +G+PSECLL
Sbjct: 405 SIG-----LPIANGSSPAQQAI-MPIGNPGIVPAVAPAVPTQIMPIPVTEPVGNPSECLL 458
Query: 559 LKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQ 618
LKNMFDP ET+PDFDL+I+ DVEEECSKYGRVKHIYVDKRSAGFVYL+FE+ EAA++AQ
Sbjct: 459 LKNMFDPNTETEPDFDLDIKEDVEEECSKYGRVKHIYVDKRSAGFVYLQFETVEAASAAQ 518
Query: 619 RAMHMRWFARRLISAIFMKPEDYEAKFK 646
RAMH RWFA R+ISAI+M P+ YE KFK
Sbjct: 519 RAMHTRWFAGRMISAIYMLPQMYETKFK 546
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 51/72 (70%), Gaps = 14/72 (19%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
M+FDEY+YLEKTVEEQ +D DSS KKK +SERSYRKRE+ +E EE KS K
Sbjct: 1 MDFDEYDYLEKTVEEQ----EDHDSSRKKK-----ESERSYRKREEIDEGIEETKS---K 48
Query: 61 RSRRDEDEENGS 72
RSR DEENGS
Sbjct: 49 RSRG--DEENGS 58
>gi|326523595|dbj|BAJ92968.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 332/662 (50%), Positives = 411/662 (62%), Gaps = 94/662 (14%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
M+FDEY+YLEK VE S+ +++ S R ++EE R K
Sbjct: 1 MDFDEYDYLEKAVEPSV-------PSTNGGGEKDRSSRRRSSTAGGGGRDQEE---RGSK 50
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRER----- 115
R R ED E RDR+ KE+ R++ R++D GR+RE+ E+D RSRE+
Sbjct: 51 RPRSGEDRERHRSGREHRDREDGKEKADREKVREKDEGRDREKVREKDGGRSREKVREKD 110
Query: 116 --REKEKERERRERRDREKERERE--RDGER-RSSSRSRRSSSQSRRSSSRSRRERERES 170
R+ EK RE+ E RDREK RE++ RD E+ R R R R + R E
Sbjct: 111 ESRDPEKVREKEESRDREKVREKDGSRDREKVREKEREGRDRLMERENGRERRSRSRSER 170
Query: 171 ERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPL 230
R E E+ RE +RERE +R R + R+ ++K + EPE DPERDQRTVFA+Q+ L
Sbjct: 171 RRGEEEEMVRELQRERERSDRHR--DYRDRDFRRKKDDGTEPEVDPERDQRTVFAFQLSL 228
Query: 231 KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKF 290
KA ERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVG I+F
Sbjct: 229 KADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG---------------------YIEF 267
Query: 291 FLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVK 350
+ DVMSVPMAIAL+GQ LLGQ VMVK
Sbjct: 268 Y-----------------------------------DVMSVPMAIALTGQPLLGQAVMVK 292
Query: 351 PSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLP 410
PSEAEKNL QSN ++GG A+G GA RKLYVGNLH N+TE QLR++FEPFG VELVQLP
Sbjct: 293 PSEAEKNLAQSNATSGGAASG--GA--RKLYVGNLHSNITEDQLRQVFEPFGQVELVQLP 348
Query: 411 LDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSAD 470
+D TG CKGFGF+QFA+LE AKAAQS LNG+L+I GR +KVS+VTD G Q + D
Sbjct: 349 VDPLTGLCKGFGFIQFARLEDAKAAQS-LNGQLDIAGRVIKVSAVTDQGGVQ-LGTTTGD 406
Query: 471 FDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVN-------GSAVNQQAIS 523
DDD+GGGLALNA SRALLM+KLDR+G ATS+ G +G AP +N SA+ +
Sbjct: 407 LDDDEGGGLALNASSRALLMRKLDRSGTATSLTGGIG-APGLNSSVGLPAASALGAPLTA 465
Query: 524 LPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEE 583
++ QP VP P+I A IG+P+E LLLKNMFDP++ETDPDFDL+I+ DV+E
Sbjct: 466 ASLLVQPVGAVPGAPLPIISQSAD--IGTPTEFLLLKNMFDPSVETDPDFDLDIRDDVQE 523
Query: 584 ECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEA 643
ECSK+G VKHI+VDK +AGFVYL F+S AAASAQR++H RWFA ++I+A FM YE
Sbjct: 524 ECSKFGVVKHIFVDKHTAGFVYLHFDSATAAASAQRSLHGRWFAGKMITATFMTAHQYEM 583
Query: 644 KF 645
KF
Sbjct: 584 KF 585
>gi|326504734|dbj|BAK06658.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 335/663 (50%), Positives = 413/663 (62%), Gaps = 96/663 (14%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
M+FDEY+YLEK VE S+ +++ S R ++EE R K
Sbjct: 1 MDFDEYDYLEKAVEPSV-------PSTNGGGEKDRSSRRRSSTAGGGGRDQEE---RGSK 50
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRER----- 115
R R ED E RDR+ KE+ R++ R++D GR+RE+ E+D RSRE+
Sbjct: 51 RPRSGEDRERHRSGREHRDREDGKEKADREKVREKDEGRDREKVREKDGGRSREKVREKD 110
Query: 116 --REKEKERERRERRDREKERERE--RDGER-RSSSRSRRSSSQSRRSSSRSRRERERES 170
R+ EK RE+ E RDREK RE++ RD E+ R R R R + R E
Sbjct: 111 ESRDPEKVREKEESRDREKVREKDGSRDREKVREKEREGRDRLMERENGRERRSRSRSER 170
Query: 171 ERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPL 230
R E E+ RE +RERE +R R + R+ ++K + EPE DPERDQRTVFA+Q+ L
Sbjct: 171 RRGEEEEMVRELQRERERSDRHR--DYRDRDFRRKKDDGTEPEVDPERDQRTVFAFQLSL 228
Query: 231 KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKF 290
KA ERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVG I+F
Sbjct: 229 KADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG---------------------YIEF 267
Query: 291 FLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVK 350
+ DVMSVPMAIAL+GQ LLGQ VMVK
Sbjct: 268 Y-----------------------------------DVMSVPMAIALTGQPLLGQAVMVK 292
Query: 351 PSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLP 410
PSEAEKNL QSN ++GG A+G GA RKLYVGNLH N+TE QLR++FEPFG VELVQLP
Sbjct: 293 PSEAEKNLAQSNATSGGAASG--GA--RKLYVGNLHSNITEDQLRQVFEPFGQVELVQLP 348
Query: 411 LDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSAD 470
+D TG CKGFGF+QFA+LE AKAAQS LNG+L+I GR +KVS+VTD G Q + D
Sbjct: 349 VDPLTGLCKGFGFIQFARLEDAKAAQS-LNGQLDIAGRVIKVSAVTDQGGVQ-LGTTTGD 406
Query: 471 FDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISL---PVV 527
DDD+GGGLALNA SRALLM+KLDR+G ATS+ G +G AP +N S+V A S+ P+
Sbjct: 407 LDDDEGGGLALNASSRALLMRKLDRSGTATSLTGGIG-APGLN-SSVGLPAASVLGAPLT 464
Query: 528 G-----QPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVE 582
QP VP P+I A IG+P+E LLLKNMFDP++ETDPDFDL+I+ DV+
Sbjct: 465 AASLLVQPVGAVPGAPLPIISQSAD--IGTPTEFLLLKNMFDPSVETDPDFDLDIRDDVQ 522
Query: 583 EECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYE 642
EECSK+G VKHI+VDK +AGFVYL F+S AAASAQR++H RWFA ++I+A FM YE
Sbjct: 523 EECSKFGVVKHIFVDKHTAGFVYLHFDSATAAASAQRSLHGRWFAGKMITATFMTAHQYE 582
Query: 643 AKF 645
KF
Sbjct: 583 MKF 585
>gi|326494786|dbj|BAJ94512.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 334/663 (50%), Positives = 412/663 (62%), Gaps = 96/663 (14%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
M+FDEY+YLEK VE S+ +++ S R ++EE R K
Sbjct: 1 MDFDEYDYLEKAVEPSV-------PSTNGGGEKDRSSRRRSSTAGGGGRDQEE---RGSK 50
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRER----- 115
R R ED E RDR+ KE+ R++ R++D GR+RE+ E+D RSRE+
Sbjct: 51 RPRSGEDRERHRSGREHRDREDGKEKADREKVREKDEGRDREKVREKDGGRSREKVREKD 110
Query: 116 --REKEKERERRERRDREKERERE--RDGER-RSSSRSRRSSSQSRRSSSRSRRERERES 170
R+ EK RE+ E RDREK RE++ RD E+ R R R R + R E
Sbjct: 111 ESRDPEKVREKEESRDREKVREKDGSRDREKVREKEREGRDRLMERENGRERRSRSRSER 170
Query: 171 ERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPL 230
R E E+ RE +RERE +R R + R+ ++K + EPE DPERDQRTVFA+Q+ L
Sbjct: 171 RRGEEEEMVRELQRERERSDRHR--DYRDRDFRRKKDDGTEPEVDPERDQRTVFAFQLSL 228
Query: 231 KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKF 290
KA ERD YEFFS+AGKVRDVRLIMDRNSRRSKGVG I+F
Sbjct: 229 KADERDAYEFFSRAGKVRDVRLIMDRNSRRSKGVG---------------------YIEF 267
Query: 291 FLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVK 350
+ DVMSVPMAIAL+GQ LLGQ VMVK
Sbjct: 268 Y-----------------------------------DVMSVPMAIALTGQPLLGQAVMVK 292
Query: 351 PSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLP 410
PSEAEKNL QSN ++GG A+G GA RKLYVGNLH N+TE QLR++FEPFG VELVQLP
Sbjct: 293 PSEAEKNLAQSNATSGGAASG--GA--RKLYVGNLHSNITEDQLRQVFEPFGQVELVQLP 348
Query: 411 LDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSAD 470
+D TG CKGFGF+QFA+LE AKAAQS LNG+L+I GR +KVS+VTD G Q + D
Sbjct: 349 VDPLTGLCKGFGFIQFARLEDAKAAQS-LNGQLDIAGRVIKVSAVTDQGGVQ-LGTTTGD 406
Query: 471 FDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISL---PVV 527
DDD+GGGLALNA SRALLM+KLDR+G ATS+ G +G AP +N S+V A S+ P+
Sbjct: 407 LDDDEGGGLALNASSRALLMRKLDRSGTATSLTGGIG-APGLN-SSVGLPAASVLGAPLT 464
Query: 528 G-----QPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVE 582
QP VP P+I A IG+P+E LLLKNMFDP++ETDPDFDL+I+ DV+
Sbjct: 465 AASLLVQPVGAVPGAPLPIISQSAD--IGTPTEFLLLKNMFDPSVETDPDFDLDIRDDVQ 522
Query: 583 EECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYE 642
EECSK+G VKHI+VDK +AGFVYL F+S AAASAQR++H RWFA ++I+A FM YE
Sbjct: 523 EECSKFGVVKHIFVDKHTAGFVYLHFDSATAAASAQRSLHGRWFAGKMITATFMTAHQYE 582
Query: 643 AKF 645
KF
Sbjct: 583 MKF 585
>gi|356536386|ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 597
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 326/678 (48%), Positives = 409/678 (60%), Gaps = 118/678 (17%)
Query: 1 MEFDEYEYLEKTVEE-QRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSG 59
M+FDEYEYLE VE Q + + + S K +R ++ +D + + + S+ G
Sbjct: 1 MDFDEYEYLENAVENPQAKHRANGGDKSVKSEERGRNGSSKHKGDDDDDVDLHPKHSKPG 60
Query: 60 KRSRRDED--EENGSRRDRDRDRDRDKERH--------------RRDRDRDRDRGRERER 103
S E E+ GS R + RD DK+R ++DR RD G ++
Sbjct: 61 DDSHDRERLREKRGSSRHGSKSRDGDKDRSSGGIRDRKRDRDRDHENKDRKRDHG---DK 117
Query: 104 ETERDRERSRERREKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSR 163
+ +RDRER R+ ++ R + E+++ +R + + R +SR R
Sbjct: 118 DVKRDRERDRDHGRDQERDRRDRGSEAERQQRSRSRSDRHRTDLDDKD-----RETSRDR 172
Query: 164 RERERESERERELELERERERERELRERERDLEMRESRRYKEKKE-VVEPEADPERDQRT 222
R+ E R+++ ++R R RE RER+R + RR+KEKKE EPEADPERDQRT
Sbjct: 173 EYRDIERSRDKDY---KDRGRVRESRERDR-----QDRRHKEKKEEATEPEADPERDQRT 224
Query: 223 VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLI 282
VFAYQ+ LKA ERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVG
Sbjct: 225 VFAYQISLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG----------------- 267
Query: 283 NSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLL 342
I+F+ DVMSVPMAIALSGQ L
Sbjct: 268 ----YIEFY-----------------------------------DVMSVPMAIALSGQPL 288
Query: 343 LGQPVMVKPSEAEKNLVQSNTSAGGTAT---GPYGAIDRKLYVGNLHFNMTETQLRKLFE 399
LGQPVMVKPSEAEKNLVQS TS T GPY RKLYVGNLH ++TE +R++FE
Sbjct: 289 LGQPVMVKPSEAEKNLVQSTTSVANGLTGLIGPYSGGARKLYVGNLHVSITEADIRRVFE 348
Query: 400 PFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHV 459
FG VELVQLPLD E+G CKGFGFVQFA+LE A+ AQS LNG+LEI GRT+KVS+VTD
Sbjct: 349 AFGQVELVQLPLD-ESGHCKGFGFVQFARLEDARNAQS-LNGQLEIGGRTIKVSAVTDQS 406
Query: 460 GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQ 519
G Q+ + DFDDD+GGGL+LNA SRA+LMQKLDR+G A+S+ GS+G S VN
Sbjct: 407 GMQEVGGNTGDFDDDEGGGLSLNACSRAILMQKLDRSGTASSMVGSIG------NSGVNN 460
Query: 520 QAISLPVVGQ--PAVPV----------PAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAM 567
++LP G A PV P T P I + IG PSECL+LKNMFDP
Sbjct: 461 TGLNLPATGNILAAAPVGGLAGGGLQIPTATIPSI-----DPIGVPSECLMLKNMFDPKD 515
Query: 568 ETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFA 627
ET+PDFDL+I+ DVE ECSK+G +KHIYVDK+SAGFVYLRFE T++A SAQ+A+H RWFA
Sbjct: 516 ETEPDFDLDIKEDVEAECSKFGALKHIYVDKKSAGFVYLRFEDTQSAISAQQALHGRWFA 575
Query: 628 RRLISAIFMKPEDYEAKF 645
++I+A FM P+ YE KF
Sbjct: 576 GKMITASFMVPQSYEDKF 593
>gi|357464471|ref|XP_003602517.1| Splicing factor-like protein [Medicago truncatula]
gi|355491565|gb|AES72768.1| Splicing factor-like protein [Medicago truncatula]
Length = 731
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/335 (72%), Positives = 278/335 (82%), Gaps = 18/335 (5%)
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTAT-GPYGAIDRK 379
RYIEFYD MSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNT+ G GPYGA+DRK
Sbjct: 403 RYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTTTGAAGVVGPYGAVDRK 462
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVGNLHFNMTE+QLR++FEPFG VE+VQLPLD+ETG CKGFGF+QFA +EHAKAAQS L
Sbjct: 463 LYVGNLHFNMTESQLREIFEPFGTVEVVQLPLDLETGHCKGFGFIQFAHIEHAKAAQS-L 521
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIA 499
NGKLEI GRT+KVSSV DH+G+QDT KSADFDDD+GG LALNAQSRALLMQKLDR+GI
Sbjct: 522 NGKLEIAGRTIKVSSVADHIGSQDTTTKSADFDDDEGG-LALNAQSRALLMQKLDRSGIT 580
Query: 500 TSIAGSL-GVAPAVNGSAVNQQAISLPV-----VGQPAVPVPAVTAP--VIPNMAAEFIG 551
SI + G+APA Q AISLP+ + +P P + P ++P AE +G
Sbjct: 581 ASIGLPMNGLAPA-------QPAISLPIGNTGLIHPGLIPAPGLALPTQIMPTQVAEPVG 633
Query: 552 SPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFEST 611
+PS CLLLKNMFDP ET+PDFDL+I+ DVEEECSKYGRVKHIYVDK SAGFVYL FE+
Sbjct: 634 TPSNCLLLKNMFDPTTETEPDFDLDIKEDVEEECSKYGRVKHIYVDKNSAGFVYLMFETV 693
Query: 612 EAAASAQRAMHMRWFARRLISAIFMKPEDYEAKFK 646
EAA++AQRAMHMRWFAR++ISAI+M+P +YEAKFK
Sbjct: 694 EAASAAQRAMHMRWFARKMISAIYMQPHEYEAKFK 728
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 96/135 (71%), Positives = 110/135 (81%), Gaps = 13/135 (9%)
Query: 195 LEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIM 254
EMR+SRR++EKKE VEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIM
Sbjct: 189 FEMRDSRRFREKKETVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIM 248
Query: 255 DRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPA 314
DRNSRRSKGVG AIMMRDDGNTLHSCLINSCC++K V ++ +VFF + V++P
Sbjct: 249 DRNSRRSKGVGIAIMMRDDGNTLHSCLINSCCILK---VDDIILVFFWIS----YVVEP- 300
Query: 315 TVLVSYRYIEFYDVM 329
+R+I +M
Sbjct: 301 -----FRFISLELIM 310
>gi|356525566|ref|XP_003531395.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 550
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/326 (74%), Positives = 274/326 (84%), Gaps = 15/326 (4%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTA-TGPYGAIDRKL 380
YIEFYD MSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN S G TGPYGA+DRKL
Sbjct: 236 YIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASGGAAGVTGPYGAVDRKL 295
Query: 381 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 440
YVGNLHFNMTE+QLR++FEPFGPVE+VQLPLD+ETG CKGFGFVQF LEHAKAAQS LN
Sbjct: 296 YVGNLHFNMTESQLREIFEPFGPVEIVQLPLDLETGHCKGFGFVQFTHLEHAKAAQS-LN 354
Query: 441 GKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIAT 500
GKLEI GRT+KVS VTDHV +QDT AKSAD DDD+GG L LNA SRALLMQ+L A
Sbjct: 355 GKLEIAGRTIKVSCVTDHVASQDTTAKSADLDDDEGG-LTLNAHSRALLMQRL-----AG 408
Query: 501 SIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLK 560
+ SLG+ P VNGS QQ ISLP+ G P +P V+PN A E +G+PS+CLLLK
Sbjct: 409 ADPASLGL-PVVNGSVPAQQTISLPI-GAPVLPTQ-----VMPNPAVEPVGNPSDCLLLK 461
Query: 561 NMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRA 620
NMFDP+ ET+PDFD++I+ DVEEECSKYGRVKHI+VDK+S+GFVYLRF++ EAA+ AQRA
Sbjct: 462 NMFDPSTETEPDFDIDIKEDVEEECSKYGRVKHIFVDKKSSGFVYLRFDTVEAASGAQRA 521
Query: 621 MHMRWFARRLISAIFMKPEDYEAKFK 646
MHMRWFARRLISA+FM+PE YEAKFK
Sbjct: 522 MHMRWFARRLISAVFMQPELYEAKFK 547
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 65/100 (65%), Gaps = 15/100 (15%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
M+FDEYEYLEKTVEE D SSKKK +KSERSYRK +++ + R K
Sbjct: 1 MDFDEYEYLEKTVEE-------DIDSSKKKKDVTDKSERSYRKPR-DVDDDLDADDRKSK 52
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKE------RHRRDRDRD 94
RSR D DE GS+RDRDRDR+RD++ RHR +R+RD
Sbjct: 53 RSRVD-DENGGSKRDRDRDRERDRDRERSSGRHRSERERD 91
>gi|225438475|ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Vitis vinifera]
Length = 542
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 256/328 (78%), Positives = 289/328 (88%), Gaps = 6/328 (1%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTS---AGGTATGPYGAIDR 378
YIEFYD MSVPMAIALSG LL GQPVMVKPSEAEKNLVQSN S +GG A GPYGA+DR
Sbjct: 215 YIEFYDAMSVPMAIALSGHLLHGQPVMVKPSEAEKNLVQSNASGAVSGGIA-GPYGAVDR 273
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
KLYVGNLHFNMTE QLR++FEPFG VELVQLPLD+ETGQCKGFGFVQFA+LEHAKAAQ+
Sbjct: 274 KLYVGNLHFNMTELQLRQIFEPFGRVELVQLPLDLETGQCKGFGFVQFAELEHAKAAQN- 332
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGI 498
LNGKL+I GR +KVSSVTDH+G QD AK+ADFDDDDGGGL+LNAQSRALLMQKLDRTGI
Sbjct: 333 LNGKLDIAGRIIKVSSVTDHIGVQDAGAKAADFDDDDGGGLSLNAQSRALLMQKLDRTGI 392
Query: 499 ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLL 558
A+SIAGSLGV P +NGSA NQQAISL + GQ AV PA+ V+ + A+E +G+P+ECLL
Sbjct: 393 ASSIAGSLGV-PMLNGSAPNQQAISLSINGQAAVSAPALPTQVVTSPASEPVGTPTECLL 451
Query: 559 LKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQ 618
LKNMFDPA E DPDFDL+I+ +V+EECS +GRVKHIYV+K SAG+VYLRFE+ EAA +AQ
Sbjct: 452 LKNMFDPATEIDPDFDLDIKEEVQEECSNFGRVKHIYVEKHSAGYVYLRFETVEAAVTAQ 511
Query: 619 RAMHMRWFARRLISAIFMKPEDYEAKFK 646
RAMHMRWFARRLISAIF++P DYEAKFK
Sbjct: 512 RAMHMRWFARRLISAIFLQPRDYEAKFK 539
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 11/73 (15%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRK--REDSEEEEEEEKSRS 58
M+FDEYEYLEK VEE +K+ D EKSERSYRK + ++++E + R
Sbjct: 1 MDFDEYEYLEKAVEEPENRKKKDGG---------EKSERSYRKREGGEEDDDDERGEGRR 51
Query: 59 GKRSRRDEDEENG 71
KRSR +E++E G
Sbjct: 52 SKRSRGEEEKERG 64
>gi|297744588|emb|CBI37850.3| unnamed protein product [Vitis vinifera]
Length = 427
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 277/471 (58%), Positives = 323/471 (68%), Gaps = 87/471 (18%)
Query: 200 SRRYKEKKE-VVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNS 258
RR+K+KKE V EPEADPERDQRTVFAYQ+ LKA ERDVYEFFS+AGKVRDVRLIMDRNS
Sbjct: 15 CRRHKDKKEEVAEPEADPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNS 74
Query: 259 RRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLV 318
RRSKGVG I+F+
Sbjct: 75 RRSKGVG---------------------YIEFY--------------------------- 86
Query: 319 SYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTA---TGPYGA 375
D MSVPMAIALSGQ LLGQPVMVKPSEAEKNLVQS T+A G GPY
Sbjct: 87 --------DAMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGGPGGLIGPYSG 138
Query: 376 IDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAA 435
R+LYVGNLHFN+TE QLR++FEPFG VELVQLP D+ETG CKGFGFVQFA+LE A+AA
Sbjct: 139 GARRLYVGNLHFNITEDQLRQVFEPFGTVELVQLPTDLETGHCKGFGFVQFARLEDARAA 198
Query: 436 QSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDR 495
QS LNG+L+I GRT+KVS VTD G QD A + DFDDD+GGGL+LNA+SRA+LMQKLDR
Sbjct: 199 QS-LNGQLDIAGRTIKVSVVTDQAGLQDIGANAGDFDDDEGGGLSLNARSRAILMQKLDR 257
Query: 496 TGIATSIAGSLG------------VAPAVNGSAVNQQAIS----LPVVGQPAVP-----V 534
+G IAGSLG AP + + V ++ PV G +P V
Sbjct: 258 SGTTPGIAGSLGSPVLNNPGLPLSTAPILGAAPVVSPLVAPLVQAPVPGLAGLPGAGLQV 317
Query: 535 PAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHI 594
PAVT P I + IG PSECL+LKNMFDP +ET+PDFDL+I+ DV++ECSK+G VKHI
Sbjct: 318 PAVTVPSI-----DTIGVPSECLMLKNMFDPKLETEPDFDLDIKEDVQDECSKFGTVKHI 372
Query: 595 YVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
YVDK SAGFV+LRFE+T+AA SAQRA+H RWFA ++I+A FM P++YEAKF
Sbjct: 373 YVDKNSAGFVFLRFENTQAAISAQRALHGRWFAGKMITATFMLPQNYEAKF 423
>gi|357146380|ref|XP_003573971.1| PREDICTED: RNA-binding protein 39-like [Brachypodium distachyon]
Length = 597
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 331/671 (49%), Positives = 413/671 (61%), Gaps = 106/671 (15%)
Query: 1 MEFDEYEYLEKTVE-----EQRQQKQDDDSSSKKKAKREEKSERSYR--KREDSEEEEEE 53
M+FDEY+YLEK VE ++D S + ++ R KR S E+ E
Sbjct: 1 MDFDEYDYLEKAVEPPVPSTNGAGEKDRSSRRRSSTGGGGGRDQDERGSKRPRSGEDRER 60
Query: 54 EKSRSGKRSRRDEDEENGSRRDRDRDRDRDKERHR---RDRDRDRDRGRERERETERDRE 110
+S R R D E++GSR DR++ R++D+ R R R++D R R + RE++ RD E
Sbjct: 61 HRSSREHRDRDDGKEKDGSR-DREKVREKDEGRDREKVREKDGGRSREKVREKDEGRDPE 119
Query: 111 RSRER---REKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERE 167
+ RE+ R++EK RE+ RDR+K RE+ERDG R R + R
Sbjct: 120 KVREKDEGRDREKIREKDSSRDRDKVREKERDG---------RDRLMERENGRERRSRSR 170
Query: 168 RESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQ 227
E R E E+ RE +RERE +R R + R+ ++K + EPE DPERDQRTVFA+Q
Sbjct: 171 SERRRGEEEEMVRELQRERERSDRHR--DYRDRDFRRKKDDGTEPEVDPERDQRTVFAFQ 228
Query: 228 MPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCV 287
+ LKA ERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVG
Sbjct: 229 LSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG---------------------Y 267
Query: 288 IKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPV 347
I+F+ DVMSVPMAIAL+GQ LLGQ V
Sbjct: 268 IEFY-----------------------------------DVMSVPMAIALTGQPLLGQAV 292
Query: 348 MVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELV 407
MVKPSEAEKNL QSN ++GG A+ RKLYVGNLH N+TE QLR++FEPFG VELV
Sbjct: 293 MVKPSEAEKNLAQSNAASGGAAS----GGARKLYVGNLHSNITEDQLRQVFEPFGQVELV 348
Query: 408 QLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAK 467
QLP+D TG CKGFGF+QFA+LE AKAAQS LNG+L+I GR +KVS+VTD G Q
Sbjct: 349 QLPVDPLTGLCKGFGFIQFARLEDAKAAQS-LNGQLDIAGRVIKVSAVTDQGGVQLGGTT 407
Query: 468 SADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQA------ 521
+ D DDD+GGGLALNA SRALLM+KLDR+G ATS+ G +G AP +N S A
Sbjct: 408 TGDLDDDEGGGLALNASSRALLMRKLDRSGTATSLTGGIG-APGLNTSVGLPAASVFGAP 466
Query: 522 -------ISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFD 574
++P VG VP PVI A IG+P+E LLLKNMFDPA+ETDPDFD
Sbjct: 467 LAAASLAPTIPTVGA----VPGAPLPVISQSAD--IGTPTEFLLLKNMFDPAVETDPDFD 520
Query: 575 LEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAI 634
L+I+ DV+EECSK+G VKHI+VDK +AGFVYL F+S+ AA SAQR++H RWFA ++I+A
Sbjct: 521 LDIRDDVQEECSKFGVVKHIFVDKHTAGFVYLHFDSSTAATSAQRSLHGRWFAGKMITAT 580
Query: 635 FMKPEDYEAKF 645
FM + YE KF
Sbjct: 581 FMTAQQYEMKF 591
>gi|357464473|ref|XP_003602518.1| Splicing factor-like protein [Medicago truncatula]
gi|355491566|gb|AES72769.1| Splicing factor-like protein [Medicago truncatula]
Length = 766
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/369 (65%), Positives = 277/369 (75%), Gaps = 51/369 (13%)
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGT-ATGPYGAIDRK 379
RYIEFYD MSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNT+ G GPYGA+DRK
Sbjct: 403 RYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTTTGAAGVVGPYGAVDRK 462
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVGNLHFNMTE+QLR++FEPFG VE+VQLPLD+ETG CKGFGF+QFA +EHAKAAQS L
Sbjct: 463 LYVGNLHFNMTESQLREIFEPFGTVEVVQLPLDLETGHCKGFGFIQFAHIEHAKAAQS-L 521
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGG---------------------- 477
NGKLEI GRT+KVSSV DH+G+QDT KSADFDDD+GG
Sbjct: 522 NGKLEIAGRTIKVSSVADHIGSQDTTTKSADFDDDEGGLSETSIFAPTISLSQFFPSYEF 581
Query: 478 ------------GLALNAQSRALLMQKLDRTGIATSIAGSL-GVAPAVNGSAVNQQAISL 524
ALNAQSRALLMQKLDR+GI SI + G+APA Q AISL
Sbjct: 582 LAHLLCLFVTFMQQALNAQSRALLMQKLDRSGITASIGLPMNGLAPA-------QPAISL 634
Query: 525 PV-----VGQPAVPVPAVTAP--VIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEI 577
P+ + +P P + P ++P AE +G+PS CLLLKNMFDP ET+PDFDL+I
Sbjct: 635 PIGNTGLIHPGLIPAPGLALPTQIMPTQVAEPVGTPSNCLLLKNMFDPTTETEPDFDLDI 694
Query: 578 QGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMK 637
+ DVEEECSKYGRVKHIYVDK SAGFVYL FE+ EAA++AQRAMHMRWFAR++ISAI+M+
Sbjct: 695 KEDVEEECSKYGRVKHIYVDKNSAGFVYLMFETVEAASAAQRAMHMRWFARKMISAIYMQ 754
Query: 638 PEDYEAKFK 646
P +YEAKFK
Sbjct: 755 PHEYEAKFK 763
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 91/109 (83%), Positives = 100/109 (91%), Gaps = 3/109 (2%)
Query: 195 LEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIM 254
EMR+SRR++EKKE VEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIM
Sbjct: 189 FEMRDSRRFREKKETVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIM 248
Query: 255 DRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLL 303
DRNSRRSKGVG AIMMRDDGNTLHSCLINSCC++K V ++ +VFF +
Sbjct: 249 DRNSRRSKGVGIAIMMRDDGNTLHSCLINSCCILK---VDDIILVFFWI 294
>gi|356575464|ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 600
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 323/685 (47%), Positives = 397/685 (57%), Gaps = 129/685 (18%)
Query: 1 MEFDEYEYLEKTVE--EQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRS 58
M+FDEYEYLEK VE E + D + K + + S + +D + S+S
Sbjct: 1 MDFDEYEYLEKAVENPEVNHRANGGDKNVKSEERGRNGSSKHKDDDDDDVVDLHPRHSKS 60
Query: 59 GKRSRRDEDEENGSRRDRDRDRDRDKERH---RRDRDRDRDRG-------RERERETERD 108
G SR DR+R R+R H RD D+DR+ G +D
Sbjct: 61 GDNSR-----------DRERQRERGSTLHGSKSRDGDKDRNSGGSRDRRRDRDRDHENKD 109
Query: 109 RERSRERREKEKERERRERRDRE-------------KERERERDGERRSSSRSRRSSSQS 155
R+R +ER +K+ +R RDR+ E E+E+ RS +
Sbjct: 110 RKRDKERDHGDKDMKRDRERDRDRNRDQERDRRDRGSEAEQEQRSRSRSDRLRTDLDDKD 169
Query: 156 RRSSSRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEAD 215
R +S S R+++ ++RER RE RE +R E+RR+KEKKE AD
Sbjct: 170 REASRDREYRDRERS-RDKDY---KDRERVRESREHDR-----ENRRHKEKKEETTEPAD 220
Query: 216 PERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGN 275
PERDQR VFAYQ+ LKA ERDV+EFFS+AGKVRDVRLIMDRNSRRSKGVG
Sbjct: 221 PERDQRAVFAYQISLKADERDVFEFFSRAGKVRDVRLIMDRNSRRSKGVG---------- 270
Query: 276 TLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAI 335
I+F+ DVMSVPMAI
Sbjct: 271 -----------YIEFY-----------------------------------DVMSVPMAI 284
Query: 336 ALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTAT---GPYGAIDRKLYVGNLHFNMTET 392
ALSGQ LLGQPVMVKPSEAEKNLVQS TS T GPY RKLYVGNLH ++TE
Sbjct: 285 ALSGQPLLGQPVMVKPSEAEKNLVQSTTSVANGLTGLIGPYSGGARKLYVGNLHISITEA 344
Query: 393 QLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 452
+R++FE FG VELVQLPLD E+G CKGFGFVQFA+LE A+ AQS LNG+LEI GRT+KV
Sbjct: 345 DIRRVFEAFGQVELVQLPLD-ESGHCKGFGFVQFARLEDARNAQS-LNGQLEIGGRTIKV 402
Query: 453 SSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAV 512
S+VTD G Q+ + DFDDD+GGG++LNA SRA+LMQKLDR+G A+S+ GSLG
Sbjct: 403 SAVTDQSGMQEFGGNTGDFDDDEGGGMSLNACSRAMLMQKLDRSGTASSMVGSLG----- 457
Query: 513 NGSAVNQQAISLPVVGQ--PAVPV----------PAVTAPVIPNMAAEFIGSPSECLLLK 560
S VN ++LP G A PV P T P I + IG SECL+LK
Sbjct: 458 -NSVVNNTGLNLPATGNILAAAPVGELAGGGLQIPTATIPSI-----DTIGVASECLMLK 511
Query: 561 NMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRA 620
NMFDP E +PDFDL+I+ DVE ECSK G +KHIYVDK+SAGFVYLRFE T++A SAQ+A
Sbjct: 512 NMFDPKDEIEPDFDLDIKEDVEAECSKLGTLKHIYVDKKSAGFVYLRFEDTQSAISAQQA 571
Query: 621 MHMRWFARRLISAIFMKPEDYEAKF 645
+H RWFA ++I+A FM P+ YE KF
Sbjct: 572 LHGRWFAGKMITASFMVPQSYEDKF 596
>gi|413934153|gb|AFW68704.1| hypothetical protein ZEAMMB73_109361 [Zea mays]
gi|413934154|gb|AFW68705.1| hypothetical protein ZEAMMB73_109361 [Zea mays]
Length = 536
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 316/658 (48%), Positives = 376/658 (57%), Gaps = 138/658 (20%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
MEFDEYEYLEK VE S K +R R+RE E R K
Sbjct: 1 MEFDEYEYLEKAVEPAPPPANGSGSGEK---------DRGSRRREGDE-------GRISK 44
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEK 120
RSR E DR+RGR R RDR++
Sbjct: 45 RSRSGE---------------------------DRERGRHRSVREHRDRDK--------- 68
Query: 121 ERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELER 180
D KE+ER RD + R R + R R R R R
Sbjct: 69 --------DDGKEKERSRDSRGKDRDREGREREKERGDRHRPREREVERERRSLSRSERR 120
Query: 181 ERERERELRERERDLEMRESRRYKEKKEV------VEPEADPERDQRTVFAYQMPLKATE 234
E E +RE E + E E Y+++ EPE DPERDQRTVFA+Q+ LKA E
Sbjct: 121 RIEEEEMVRELEMERERSERHHYRDRDVRRRKDDGAEPEVDPERDQRTVFAFQLSLKADE 180
Query: 235 RDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVA 294
RDVYEFFS+AGKVRDVRLIMDRNSRRSKGVG I+F+
Sbjct: 181 RDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG---------------------YIEFY--- 216
Query: 295 EVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEA 354
DVMSVPMAIALSGQ LLGQ VMVKPSEA
Sbjct: 217 --------------------------------DVMSVPMAIALSGQPLLGQAVMVKPSEA 244
Query: 355 EKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIE 414
EKNLVQSN ++GG A+G GA RKLYVGNLH N+TE QLR++FEPFG VELVQLPLD
Sbjct: 245 EKNLVQSNATSGGAASG--GA--RKLYVGNLHSNITEDQLRQVFEPFGQVELVQLPLDAM 300
Query: 415 TGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDD 474
TG CKG+GF+QFA+LE AKAAQS LNG+L+I GR +KVS+VTDHVG Q + A + D DDD
Sbjct: 301 TGLCKGYGFIQFARLEDAKAAQS-LNGQLDIAGRVIKVSAVTDHVGVQASGATTGDLDDD 359
Query: 475 DGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVA----PA--VNGSAVNQQAISLPVVG 528
+GGGLALNA SRA LM KLDR+G ATS+ G +G A PA V G+A +S V
Sbjct: 360 EGGGLALNASSRAALMLKLDRSGTATSLTGGIGAAGVAVPATSVIGAAGAASLLSPTVSA 419
Query: 529 QPAVPVPAVTAPVIPNMAAEFIGS-PSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSK 587
+VP APV+P A I S P+E LLLKNMFDP++ETDPDFDL+I+ DV++ECSK
Sbjct: 420 VGSVP----GAPVLPITAQNVIMSTPTEFLLLKNMFDPSLETDPDFDLDIRDDVQDECSK 475
Query: 588 YGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+G VKHI+VDK +AGFVYL+F+S AA AQ+A+H RWFA ++I+A FM ++Y KF
Sbjct: 476 FGAVKHIFVDKNTAGFVYLQFDSVTAAGKAQQALHGRWFAGKMITATFMSDQEYSTKF 533
>gi|255550678|ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
gi|223544486|gb|EEF46005.1| splicing factor, putative [Ricinus communis]
Length = 609
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 258/443 (58%), Positives = 307/443 (69%), Gaps = 73/443 (16%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNT 276
ERDQRTVFAYQ+ LKA ERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVG
Sbjct: 222 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG----------- 270
Query: 277 LHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIA 336
I+F+ DVMSVPMAIA
Sbjct: 271 ----------YIEFY-----------------------------------DVMSVPMAIA 285
Query: 337 LSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRK 396
LSGQ LLGQPVMVKPSEAEKNLVQS T+ +GPY R+LYVGNLHFN+TE QLR+
Sbjct: 286 LSGQPLLGQPVMVKPSEAEKNLVQSTTTV-NAGSGPYSGGARRLYVGNLHFNITEDQLRQ 344
Query: 397 LFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVT 456
+FEPFG VELVQLPLD ETG CKGFGFVQFA+LE AK A + LNG++EI GR +KVS+VT
Sbjct: 345 VFEPFGIVELVQLPLD-ETGHCKGFGFVQFARLEDAKNALN-LNGQVEIAGRPIKVSTVT 402
Query: 457 DHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSA 516
D G QD+ + DFDDD+GGGLALNA+SRA+LMQKLDR+G A+SIAGSLG + A G A
Sbjct: 403 DQTGMQDSTTNAGDFDDDEGGGLALNARSRAILMQKLDRSGTASSIAGSLGTSAASTGLA 462
Query: 517 VNQQAI--SLPVVGQPAVPVPAVTAPVIPNM------------AAEFIGSPSECLLLKNM 562
V I + PV+ P+ + +AP P + + + IG PSECLLLKNM
Sbjct: 463 VPTAPILGAAPVIPPIVAPLISGSAPAFPGLPGASVQLPGAIPSVDTIGVPSECLLLKNM 522
Query: 563 FDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMH 622
FDP++ET+PDFDL+I+ DV+ ECSK+G ++HIYVDK SAGFVYLRFE+T++A SAQRA+H
Sbjct: 523 FDPSIETEPDFDLDIKEDVQLECSKFGNLQHIYVDKNSAGFVYLRFENTQSAISAQRALH 582
Query: 623 MRWFARRLISAIFMKPEDYEAKF 645
RWFA ++I+A FM P+ YE KF
Sbjct: 583 GRWFAGKMITATFMVPQVYETKF 605
>gi|194704666|gb|ACF86417.1| unknown [Zea mays]
gi|414871304|tpg|DAA49861.1| TPA: hypothetical protein ZEAMMB73_656561 [Zea mays]
Length = 537
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 315/659 (47%), Positives = 374/659 (56%), Gaps = 139/659 (21%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
MEFDEYEYLEK VE Q S S +K +R R+RE E
Sbjct: 1 MEFDEYEYLEKAVEPAPPQANGSGSGSGEK-------DRGSRRREGGE------------ 41
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEK 120
DR +R R DRDRDR
Sbjct: 42 --------------------DRISKRSRSGEDRDRDR----------------------- 58
Query: 121 ERERRERRDREKE---RERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELE 177
R RE RDR+K+ ER R+ + R R + R R R R R
Sbjct: 59 HRSGREHRDRDKDDVKEERSRESRGKDRDREGREREKERGDRHRLREREVERERRSRSRS 118
Query: 178 LERERERERELRERERDLEMRESRRYKEKKEV------VEPEADPERDQRTVFAYQMPLK 231
R E E +RE ER+ E E Y+++ EPE DPERDQRTVFA+Q+ LK
Sbjct: 119 ERRRAEEEEMVRELERERERSERHHYRDRDVRRRKDDGAEPEVDPERDQRTVFAFQLSLK 178
Query: 232 ATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFF 291
A ERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVG I+F+
Sbjct: 179 ADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG---------------------YIEFY 217
Query: 292 LVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKP 351
DVMSVPMAIALSGQ LLGQ VMVKP
Sbjct: 218 -----------------------------------DVMSVPMAIALSGQPLLGQAVMVKP 242
Query: 352 SEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPL 411
SEAEKNLVQSN ++GG A+G GA RKLYVGNLH N+TE QLR++FEPFG VELVQLP+
Sbjct: 243 SEAEKNLVQSNATSGGAASG--GA--RKLYVGNLHSNITEDQLRQVFEPFGQVELVQLPV 298
Query: 412 DIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADF 471
D TG CKG+GF+QFA+LE AKAAQS LNG+L+I GR +KVS+VTDHVG Q + A + D
Sbjct: 299 DPMTGLCKGYGFIQFARLEDAKAAQS-LNGQLDIAGRVIKVSAVTDHVGMQASGATTGDL 357
Query: 472 DDDDGGGLALNAQSRALLMQKLDRTGIATSIA---GSLGVA-PAVNGSAVNQQAISLPVV 527
DDD+GGGLALNA SRA LM KLDR+G ATS+ G+ GVA PA + A LP
Sbjct: 358 DDDEGGGLALNASSRAALMLKLDRSGTATSLTRGIGAAGVAVPATSVIGAPGAASLLPPT 417
Query: 528 GQPAVPVPAVTAPVIPNMAAEF-IGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECS 586
VP APV+P + +P+E LLLKNMFDPA+ETDPDFDL+I+ DV++ECS
Sbjct: 418 VAAVGSVPG--APVLPVTTQNVTMSTPTEFLLLKNMFDPALETDPDFDLDIRDDVQDECS 475
Query: 587 KYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
K+G VKHI+VDK +AGFVYL+F+S AAA AQ A+H RWFA ++I+A FM +Y KF
Sbjct: 476 KFGAVKHIFVDKNTAGFVYLQFDSVTAAAKAQNALHGRWFAGKMITATFMSALEYSTKF 534
>gi|224034337|gb|ACN36244.1| unknown [Zea mays]
Length = 410
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 269/479 (56%), Positives = 320/479 (66%), Gaps = 81/479 (16%)
Query: 174 RELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKAT 233
RELE+ERER R+R+ + EPE DPERDQRTVFA+Q+ LKA
Sbjct: 3 RELEMERERSERHHYRDRDVRRRKDDG---------AEPEVDPERDQRTVFAFQLSLKAD 53
Query: 234 ERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLV 293
ERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVG I+F+
Sbjct: 54 ERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG---------------------YIEFY-- 90
Query: 294 AEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSE 353
DVMSVPMAIALSGQ LLGQ VMVKPSE
Sbjct: 91 ---------------------------------DVMSVPMAIALSGQPLLGQAVMVKPSE 117
Query: 354 AEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDI 413
AEKNLVQSN ++GG A+G GA RKLYVGNLH N+TE QLR++FEPFG VELVQLPLD
Sbjct: 118 AEKNLVQSNATSGGAASG--GA--RKLYVGNLHSNITEDQLRQVFEPFGQVELVQLPLDA 173
Query: 414 ETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDD 473
TG CKG+GF+QFA+LE AKAAQS LNG+L+I GR +KVS+VTDHVG Q + A + D DD
Sbjct: 174 MTGLCKGYGFIQFARLEDAKAAQS-LNGQLDIAGRVIKVSAVTDHVGVQASGATTGDLDD 232
Query: 474 DDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVA----PA--VNGSAVNQQAISLPVV 527
D+GGGLALNA SRA LM KLDR+G ATS+ G +G A PA V G+A +S V
Sbjct: 233 DEGGGLALNASSRAALMLKLDRSGTATSLTGGIGAAGVAVPATSVIGAAGAASLLSPTVS 292
Query: 528 GQPAVPVPAVTAPVIPNMAAEFIGS-PSECLLLKNMFDPAMETDPDFDLEIQGDVEEECS 586
+VP APV+P A I S P+E LLLKNMFDP++ETDPDFDL+I+ DV++ECS
Sbjct: 293 AVGSVP----GAPVLPITAQNVIMSTPTEFLLLKNMFDPSLETDPDFDLDIRDDVQDECS 348
Query: 587 KYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
K+G VKHI+VDK +AGFVYL+F+S AA AQ+A+H RWFA ++I+A FM ++Y KF
Sbjct: 349 KFGAVKHIFVDKNTAGFVYLQFDSVTAAGKAQQALHGRWFAGKMITATFMSDQEYSTKF 407
>gi|242039571|ref|XP_002467180.1| hypothetical protein SORBIDRAFT_01g021020 [Sorghum bicolor]
gi|241921034|gb|EER94178.1| hypothetical protein SORBIDRAFT_01g021020 [Sorghum bicolor]
Length = 535
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 259/447 (57%), Positives = 306/447 (68%), Gaps = 72/447 (16%)
Query: 206 KKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG 265
K + EPE DPERDQRTVFA+Q+ LKA ERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVG
Sbjct: 151 KDDGAEPEVDPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 210
Query: 266 NAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEF 325
I+F+
Sbjct: 211 ---------------------YIEFY---------------------------------- 215
Query: 326 YDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNL 385
DVMSVPMAIALSGQ LLGQ VMVKPSEAEKNLVQSN ++GG A+G GA RKLYVGNL
Sbjct: 216 -DVMSVPMAIALSGQPLLGQAVMVKPSEAEKNLVQSNATSGGAASG--GA--RKLYVGNL 270
Query: 386 HFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEI 445
H N+TE QLR++FEPFG VELVQLPLD TG CKG+GF+QFA+LE AKAAQS LNG+L+I
Sbjct: 271 HSNITEDQLRQVFEPFGQVELVQLPLDPMTGLCKGYGFIQFARLEDAKAAQS-LNGQLDI 329
Query: 446 VGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGS 505
GR +KVS+VTDHVG Q + A + D DDD+GGGLALNA SRA LM KLDR+G ATS+ G
Sbjct: 330 AGRVIKVSAVTDHVGVQASGATTGDLDDDEGGGLALNASSRAALMLKLDRSGTATSLTGG 389
Query: 506 LGVA----PA--VNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGS-PSECLL 558
+G A PA V G+ +S V +VP APV+P I S P+E LL
Sbjct: 390 IGAAGVSLPATSVIGAPGAASLLSPTVAAVGSVP----GAPVLPVTTQNVIMSTPTEFLL 445
Query: 559 LKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQ 618
LKNMFDPA+ETDPDFDL+I+ DV++ECSK+G VKHI+VDK +AGFVYL+F+S AA AQ
Sbjct: 446 LKNMFDPALETDPDFDLDIRDDVQDECSKFGAVKHIFVDKNTAGFVYLQFDSVAAAGKAQ 505
Query: 619 RAMHMRWFARRLISAIFMKPEDYEAKF 645
+A+H RWFA ++I+A FM ++Y KF
Sbjct: 506 QALHGRWFAGKMITATFMSAQEYSTKF 532
>gi|62320860|dbj|BAD93824.1| splicing factor-like protein [Arabidopsis thaliana]
Length = 308
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/320 (73%), Positives = 266/320 (83%), Gaps = 13/320 (4%)
Query: 329 MSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN-TSAGGTATGPYGAIDRKLYVGNLHF 387
MSVPMAIALSGQL LGQPVMVKPSEAEKNL QSN T+ GGT G DRKLYVGNLHF
Sbjct: 1 MSVPMAIALSGQLFLGQPVMVKPSEAEKNLAQSNSTTVGGT-----GPADRKLYVGNLHF 55
Query: 388 NMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVG 447
NM+E QLR++FE FGPVELVQLPLD ETGQCKGFGF+QF QLEH+KAAQ ALNGKLEI G
Sbjct: 56 NMSELQLRQIFEAFGPVELVQLPLDPETGQCKGFGFIQFVQLEHSKAAQIALNGKLEIAG 115
Query: 448 RTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLG 507
RT+KVSSV+DH+GTQD+A KSADFDDDDGGGLALNAQSRA+LMQKLDR+GIATSI GSLG
Sbjct: 116 RTIKVSSVSDHIGTQDSAPKSADFDDDDGGGLALNAQSRAMLMQKLDRSGIATSIVGSLG 175
Query: 508 VAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAM 567
V P +NG+A NQ ++ P+ P + IP+ E +G PSECLLLKNMFDPA
Sbjct: 176 V-PGLNGAAFNQPGMN------PSFPTSVLPTTAIPSFVNEHVGLPSECLLLKNMFDPAT 228
Query: 568 ETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFA 627
ET+P+FDLEI+ DV +ECSKYG V HIYVDK SAGFVYLRF+S EAAA+AQRAMHMRWFA
Sbjct: 229 ETEPNFDLEIRDDVADECSKYGPVNHIYVDKNSAGFVYLRFQSVEAAAAAQRAMHMRWFA 288
Query: 628 RRLISAIFMKPEDYEAKFKS 647
+++ISA FM P +YEAK K+
Sbjct: 289 QKMISATFMPPHEYEAKAKA 308
>gi|357113992|ref|XP_003558785.1| PREDICTED: RNA-binding protein 39-like [Brachypodium distachyon]
Length = 551
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 262/454 (57%), Positives = 313/454 (68%), Gaps = 79/454 (17%)
Query: 206 KKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG 265
K++ EPEADPERDQRTVFA+Q+ LKA ERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVG
Sbjct: 165 KEDGAEPEADPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 224
Query: 266 NAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEF 325
I+F+
Sbjct: 225 ---------------------YIEFY---------------------------------- 229
Query: 326 YDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNL 385
DVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQS+ ++ A+G GA RKLYVGNL
Sbjct: 230 -DVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSSATSSVAASG--GA--RKLYVGNL 284
Query: 386 HFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEI 445
H N+TE QLR++FEPFG VELVQLP+D TG CKGFGFVQFA+LE AKAAQS LNG+L+I
Sbjct: 285 HANITEDQLRQVFEPFGLVELVQLPVDPLTGLCKGFGFVQFARLEDAKAAQS-LNGQLDI 343
Query: 446 VGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGS 505
GR +KVS+VTD G Q + A + D DDD+GGGLALNA SRALLMQKLDR+G+ TS+
Sbjct: 344 AGRVIKVSAVTDQAGVQVSGATTGDLDDDEGGGLALNASSRALLMQKLDRSGVTTSLTSG 403
Query: 506 LGVAPAVNGSAVNQQAISLPVVG--------QPAVP----VPAVTAPVIPNMAAEFIGSP 553
+G A +N ++V A+S V+G QP + +P + PVI A P
Sbjct: 404 MGAA-GLN-TSVTLPAVS--VLGAPPAAPALQPTLTGLGLIPGASVPVISQPIAT--APP 457
Query: 554 SECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEA 613
SECLLLKNMFDPA+ETDPDFDL+I+ DV EECSK+G+++HI+VDK +AGFVYLRF+S A
Sbjct: 458 SECLLLKNMFDPAVETDPDFDLDIKDDVREECSKFGQIRHIFVDKNTAGFVYLRFDSITA 517
Query: 614 AASAQRAMHMRWFARRLISAIFMKPEDYEAKFKS 647
A AQ+A+ RWFA ++I+A FM P+ YEAKF S
Sbjct: 518 AMGAQKALQGRWFAGKMITATFMSPQQYEAKFPS 551
>gi|449454219|ref|XP_004144853.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
gi|449506986|ref|XP_004162902.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 562
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 274/556 (49%), Positives = 342/556 (61%), Gaps = 86/556 (15%)
Query: 112 SRERREKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESE 171
+R + ++E RE R +DR+ +R++ER +R R + + +S R S+
Sbjct: 67 NRGKEDREGNREERSSKDRDVDRDKERSHDRDRRGRDGERNREREQSRRSRSRSERHRSD 126
Query: 172 REREL-ELERERERERELRERERDLEMRESRRYKEKK-EVVEPEADPERDQRTVFAYQMP 229
R+ + E R+ E +ERE R+ RRYK+KK E EPEADPERDQRTVFAYQ+
Sbjct: 127 RDDGIRERSRDNELREREKERESRERGRDGRRYKDKKDETAEPEADPERDQRTVFAYQIS 186
Query: 230 LKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIK 289
LKATERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVG ++
Sbjct: 187 LKATERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG---------------------YVE 225
Query: 290 FFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMV 349
F V M L SGQLLL QPVMV
Sbjct: 226 FVDAMSVPMAIAL-----------------------------------SGQLLLSQPVMV 250
Query: 350 KPSEAEKNLVQSNT--SAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELV 407
KPSEAEKN VQS + G A GPY R+LYVGNLH N+TE LR++F FG VELV
Sbjct: 251 KPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELV 310
Query: 408 QLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAK 467
Q+P+D E+G CKGFGF+QF +LE A+ A S LNG+LEI GRT+KVS+VTD G QD A
Sbjct: 311 QMPVD-ESGHCKGFGFIQFTRLEDARNALS-LNGQLEIAGRTIKVSTVTDQPGLQDVGAS 368
Query: 468 SADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGV-----------APAVNGSA 516
+ D D++DGGGL+LNA SRA LMQKLDRTG A+SIAGSLG AP + G+
Sbjct: 369 TGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSLGTHVVNNTGATMPAPILGGAT 428
Query: 517 VNQQAISLPVVGQPAVP-------VPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMET 569
+ ++ + PA P VP VTA ++ +G+PSECLLLKNMFDP E+
Sbjct: 429 IPSLSVGTSLAAFPAFPGLGAGVQVPPVTANLLG------VGTPSECLLLKNMFDPTAES 482
Query: 570 DPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARR 629
+P FDL+I+ DVEEECS++G++KHIYVD+ SAGFVYLRFE +E+A AQRA++ RWFA +
Sbjct: 483 EPTFDLDIRDDVEEECSRFGKLKHIYVDRNSAGFVYLRFEKSESAMEAQRALNGRWFAGK 542
Query: 630 LISAIFMKPEDYEAKF 645
+I A FM YEAKF
Sbjct: 543 MIGATFMDIPSYEAKF 558
>gi|242036887|ref|XP_002465838.1| hypothetical protein SORBIDRAFT_01g046740 [Sorghum bicolor]
gi|241919692|gb|EER92836.1| hypothetical protein SORBIDRAFT_01g046740 [Sorghum bicolor]
Length = 541
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 316/661 (47%), Positives = 384/661 (58%), Gaps = 134/661 (20%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
M+FDEYEYLEKTVE A + S D ++E + SG
Sbjct: 1 MDFDEYEYLEKTVE----------------ASGAPANGSSGPGSGDKDKERSSRRRSSGG 44
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEK 120
DEE K R +R R E R+ +R+R R R+R +
Sbjct: 45 ------DEERDDV----------KRRSKRSR-------SEEGRDRDRERHRDRDRHRSSR 81
Query: 121 ERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELER 180
ER R+R +EKER+RE+D + RS R + R + + + R
Sbjct: 82 ERRDRDRDGKEKERDREKDKDMRSRDRDLEREREREREREKEKDRQRRSR---------- 131
Query: 181 ERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEF 240
R R+ E RE + K+EV EPE DPERDQRTVFA+Q+ LKA ERDVYEF
Sbjct: 132 --SRSERHRDDEGRDRYRERDVRRRKEEVAEPEVDPERDQRTVFAFQLSLKADERDVYEF 189
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVF 300
FS+AGKVRDVRLIMDRNSRRSKGVG I+F+
Sbjct: 190 FSRAGKVRDVRLIMDRNSRRSKGVG---------------------YIEFY--------- 219
Query: 301 FLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQ 360
D MSVPMAIALSGQLLLGQ VMVKPSEAEKNLVQ
Sbjct: 220 --------------------------DAMSVPMAIALSGQLLLGQQVMVKPSEAEKNLVQ 253
Query: 361 SNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKG 420
SN S+ G A+ RKLYVGNLH N+ E QLR++FEPFG VELVQLPLD TG CKG
Sbjct: 254 SNASSSGAAS----GGARKLYVGNLHSNINEDQLRQVFEPFGQVELVQLPLDPLTGLCKG 309
Query: 421 FGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLA 480
FGFVQF +LE AKAAQS LNG+LEI GR +KVS+VTD G Q + A + D DDD+GGGLA
Sbjct: 310 FGFVQFVRLEDAKAAQS-LNGQLEIAGRVIKVSAVTDQAGVQVSGA-TGDLDDDEGGGLA 367
Query: 481 LNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVG---------QPA 531
LNA SRALLMQKLDR+GI TS+ G +G A G + ++ V+G P
Sbjct: 368 LNASSRALLMQKLDRSGITTSLTGGMGTA----GLSTPVVIPTVSVLGAAPAAAPLLHPT 423
Query: 532 VP----VPAVTAPV-IPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECS 586
VP +P T P+ P++ + PSECLLLKNMFDPA+ETDPDFDL+I+ DV+EECS
Sbjct: 424 VPGLGSIPGATLPITTPSID---LAPPSECLLLKNMFDPALETDPDFDLDIRDDVQEECS 480
Query: 587 KYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKFK 646
K+G++KHI+VDK +AGFVYLRF+S AA SAQ+A+H RWFA ++I+A FM P+ YE KF
Sbjct: 481 KFGQLKHIFVDKNTAGFVYLRFDSITAAMSAQKALHGRWFAGKMITATFMTPQQYEMKFP 540
Query: 647 S 647
S
Sbjct: 541 S 541
>gi|21553746|gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana]
Length = 560
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 307/659 (46%), Positives = 380/659 (57%), Gaps = 119/659 (18%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKS-ERSYRKREDSEEEEEEEKSRSG 59
M+FDEYEYLEKTVE + + + +K K E K RS R R D
Sbjct: 1 MDFDEYEYLEKTVENPHLENEVGNGGGDEKVKSEGKERSRSSRHRGD------------- 47
Query: 60 KRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKE 119
K+ RDEDE+ + RDR R R+R+RE + D+E R +
Sbjct: 48 KKKERDEDEDGRRSKRSRSHHRSRSRDRERDRHRSSREHRDRDREKDVDKEE----RNGK 103
Query: 120 KERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELE 179
R++ K R+ E+D RRS SRS R SQ ERE+ LE+E
Sbjct: 104 DRERDRDKDRDSKGRDHEKDRSRRSRSRSERHRSQ----------------EREKSLEIE 147
Query: 180 -RERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVY 238
+ERE + R+R R + +E + VEPEADPERDQRTVFAYQ+ L+ATERDVY
Sbjct: 148 PKERETKDRDRDRRRHKDKKEDK--------VEPEADPERDQRTVFAYQIALRATERDVY 199
Query: 239 EFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGM 298
EFFS+AGKVRDVR+IMDR SRRS+G+G ++F+
Sbjct: 200 EFFSRAGKVRDVRIIMDRISRRSRGIG---------------------YVEFY------- 231
Query: 299 VFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNL 358
D MSVPMAIALSGQ LLGQPVMVKPSEAEKNL
Sbjct: 232 ----------------------------DTMSVPMAIALSGQPLLGQPVMVKPSEAEKNL 263
Query: 359 VQSNTSAGGTAT--GPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETG 416
VQS T+A G GPY R+LYVGNLH NM+E LRK+FE FG VELVQ+P D ETG
Sbjct: 264 VQSTTAAAGAGGMLGPYSGGARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETG 322
Query: 417 QCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHV------GTQDTAAKSAD 470
CKGFGFVQFA+LE A+ A + LNG+LEI GR +KVS+VTD TQ T D
Sbjct: 323 LCKGFGFVQFARLEDARNALN-LNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDD 381
Query: 471 FDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQP 530
+LNAQSRALLMQKLDR+G A+S L A + NG +++ P + Q
Sbjct: 382 DGGGL----SLNAQSRALLMQKLDRSGTASSTG--LTTAASFNGGVSTISSLAAPALVQG 435
Query: 531 AVP-VPAVTAPVIPN-MAAEF--IGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECS 586
+ P V + +IP + A F IG PSECLLLKNMFDP+ ET+ DFD +I+ DV+EECS
Sbjct: 436 SFPAVAGLAGGIIPGVIPAGFDPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECS 495
Query: 587 KYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
K+G++ HI+VDK S GFVYLRFE+ +AA AQRA+H RWFA ++I+A +M E YEAKF
Sbjct: 496 KFGKLNHIFVDKNSVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKF 554
>gi|218192112|gb|EEC74539.1| hypothetical protein OsI_10059 [Oryza sativa Indica Group]
Length = 567
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 263/461 (57%), Positives = 310/461 (67%), Gaps = 89/461 (19%)
Query: 206 KKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG 265
K+E EPEADPERDQRTVFAYQ+ LKA ERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVG
Sbjct: 177 KEEAGEPEADPERDQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 236
Query: 266 NAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEF 325
I+F+
Sbjct: 237 ---------------------YIEFY---------------------------------- 241
Query: 326 YDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNL 385
DVMSVPMAIALSGQLLLGQ VMVKPSEAEKNLVQSN S+ G A+ RKLYVGNL
Sbjct: 242 -DVMSVPMAIALSGQLLLGQQVMVKPSEAEKNLVQSNASSSGAAS----GGARKLYVGNL 296
Query: 386 HFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQ--FAQLEHAKAAQSALNGKL 443
H N+TE QLR++FEPFG VELVQLPLD TG CKGFGFVQ FA+LE AKAAQS LNG+L
Sbjct: 297 HSNITEDQLRQVFEPFGQVELVQLPLDPLTGLCKGFGFVQASFARLEDAKAAQS-LNGQL 355
Query: 444 EIVGRTLK--VSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATS 501
+I GR +K VS+VTD G Q + + D DDD+GGGLALNA SRALLMQKLDR+G+ TS
Sbjct: 356 DIAGRVIKASVSAVTDQAGVQVSGVTTGDLDDDEGGGLALNASSRALLMQKLDRSGVTTS 415
Query: 502 IAGSLGVAPAVNGSAVNQQAISLP---VVGQPAVPVPAVTAPVIPNMA------------ 546
+ + G+A G+ +N ++ LP V+G P PV A P +P +
Sbjct: 416 L--TAGIA----GTGLN-TSVGLPPASVLGAP--PVAASVLPTVPGLGSVPGVSLPITTQ 466
Query: 547 AEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYL 606
A PSECLLLKNMFDP++ETDPDFDL+I+ DV+EECSK+G+VKHI+VDK ++GFVYL
Sbjct: 467 AIETAPPSECLLLKNMFDPSVETDPDFDLDIKDDVQEECSKFGQVKHIFVDKNTSGFVYL 526
Query: 607 RFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKFKS 647
RF+S AA SAQ+A+H RWFA ++I+A FM P+ Y KF S
Sbjct: 527 RFDSITAAMSAQKALHGRWFAGKMITATFMSPQQYSTKFPS 567
>gi|18398260|ref|NP_565399.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|20197280|gb|AAC64224.2| putative splicing factor [Arabidopsis thaliana]
gi|133778824|gb|ABO38752.1| At2g16940 [Arabidopsis thaliana]
gi|330251464|gb|AEC06558.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 561
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 308/660 (46%), Positives = 380/660 (57%), Gaps = 120/660 (18%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKS-ERSYRKREDSEEEEEEEKSRSG 59
M+FDEYEYLEKTVE + + + +K K E K RS R R D
Sbjct: 1 MDFDEYEYLEKTVENPHLENEVGNGGGDEKVKSEGKERSRSSRHRGD------------- 47
Query: 60 KRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKE 119
K+ RDEDE+ + RDR R R+R+RE + D+E R +
Sbjct: 48 KKKERDEDEDGRRSKRSRSHHRSRSRDRERDRHRSSREHRDRDREKDVDKEE----RNGK 103
Query: 120 KERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELE 179
R++ K R+ E+D RRS SRS R SQ ERE+ LE+E
Sbjct: 104 DRERDRDKDRDSKGRDHEKDRSRRSRSRSERHRSQ----------------EREKSLEIE 147
Query: 180 -RERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVY 238
+ERE + R+R R + +E + VEPEADPERDQRTVFAYQ+ L+ATERDVY
Sbjct: 148 PKERETKDRDRDRRRHKDKKEDK--------VEPEADPERDQRTVFAYQIALRATERDVY 199
Query: 239 EFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGM 298
EFFS+AGKVRDVR+IMDR SRRS+G+G ++F+
Sbjct: 200 EFFSRAGKVRDVRIIMDRISRRSRGIG---------------------YVEFY------- 231
Query: 299 VFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNL 358
D MSVPMAIALSGQ LLGQPVMVKPSEAEKNL
Sbjct: 232 ----------------------------DTMSVPMAIALSGQPLLGQPVMVKPSEAEKNL 263
Query: 359 VQSNTSAGGTAT--GPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETG 416
VQS T+A G GPY R+LYVGNLH NM+E LRK+FE FG VELVQ+P D ETG
Sbjct: 264 VQSTTAAAGAGGMLGPYSGGARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETG 322
Query: 417 QCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHV------GTQDTAAKSAD 470
CKGFGFVQFA+LE A+ A + LNG+LEI GR +KVS+VTD TQ T D
Sbjct: 323 LCKGFGFVQFARLEDARNALN-LNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDD 381
Query: 471 FDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQP 530
+LNAQSRALLMQKLDR+G A+S L A + NG +++ P + Q
Sbjct: 382 DGGGL----SLNAQSRALLMQKLDRSGTASSTG--LTTAASFNGGVSTISSLAAPALVQG 435
Query: 531 AVPVPAVTA--PVIPN-MAAEF--IGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC 585
+ P A A +IP + A F IG PSECLLLKNMFDP+ ET+ DFD +I+ DV+EEC
Sbjct: 436 SFPAVAGLAGSGIIPGVIPAGFDPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEEC 495
Query: 586 SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
SK+G++ HI+VDK S GFVYLRFE+ +AA AQRA+H RWFA ++I+A +M E YEAKF
Sbjct: 496 SKFGKLNHIFVDKNSVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKF 555
>gi|222612890|gb|EEE51022.1| hypothetical protein OsJ_31660 [Oryza sativa Japonica Group]
Length = 548
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 256/449 (57%), Positives = 308/449 (68%), Gaps = 69/449 (15%)
Query: 206 KKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG 265
K + EPEADPERDQRTVFA+Q+ LKA ERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVG
Sbjct: 162 KDDGAEPEADPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 221
Query: 266 NAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEF 325
I+F+
Sbjct: 222 ---------------------YIEFY---------------------------------- 226
Query: 326 YDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNL 385
D MSVPMAIAL+GQ+LLGQ VMVKPSEAEKNLVQSN ++GG A+G GA RKLYVGNL
Sbjct: 227 -DAMSVPMAIALTGQVLLGQQVMVKPSEAEKNLVQSNVASGGIASG--GA--RKLYVGNL 281
Query: 386 HFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEI 445
H N+TE QLR++FEPFG VELVQLP+D TG CKGFGF+QFA+LE AKAAQS LNG+L+I
Sbjct: 282 HSNITEDQLRQVFEPFGQVELVQLPVDPLTGLCKGFGFIQFARLEDAKAAQS-LNGQLDI 340
Query: 446 VGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGS 505
GR +KVS+VT+ G Q A + D DDD+GGGLALNA SRA+LM+KLDR+G ATSI G
Sbjct: 341 AGRVIKVSAVTEQAGLQVGGATTGDLDDDEGGGLALNASSRAMLMRKLDRSGTATSITGG 400
Query: 506 LGVAPAVNGS----AVNQQAISLPVVG--QPAVP-VPAVTAPVIPNMAAEFIGSPSECLL 558
+G+ P VN S + + LP QP +P + V IP + IGSP+E LL
Sbjct: 401 IGI-PGVNTSVELPSASVTGAPLPTTSLIQPTIPAIGTVPGIQIPGTQSADIGSPTEFLL 459
Query: 559 LKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQ 618
LKNMFDPA+ETDPDFDL+I+ DV++ECSK+G V HI+VDK +AGFVYL F+S AA +AQ
Sbjct: 460 LKNMFDPAVETDPDFDLDIKDDVQDECSKFGAVNHIFVDKNTAGFVYLHFDSVAAATAAQ 519
Query: 619 RAMHMRWFARRLISAIFMKPEDYEAKFKS 647
RA+H RWFA ++I+A FM + Y+ KF +
Sbjct: 520 RALHGRWFAGKMITATFMTAQQYKMKFPN 548
>gi|334184263|ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251466|gb|AEC06560.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 610
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 312/703 (44%), Positives = 386/703 (54%), Gaps = 157/703 (22%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
M+FDEYEYLEKTVE + + + +K K E K ERS R R K
Sbjct: 1 MDFDEYEYLEKTVENPHLENEVGNGGGDEKVKSEGK-ERSRSSRH-----------RGDK 48
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEK 120
+ RDEDE+ + RDR R R+R+RE + D+E R +
Sbjct: 49 KKERDEDEDGRRSKRSRSHHRSRSRDRERDRHRSSREHRDRDREKDVDKEE----RNGKD 104
Query: 121 ERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELER 180
R++ K R+ E+D RRS SRS R SQ ERE+ LE+E
Sbjct: 105 RERDRDKDRDSKGRDHEKDRSRRSRSRSERHRSQ----------------EREKSLEIE- 147
Query: 181 ERERERELRERERD--------------------------------------------LE 196
+ERE ++R+RD +
Sbjct: 148 --PKERETKDRDRDRRYTSELVIDFIIYVHWYCLLYNLMGHVPFKIIIVIEGTSRASCVY 205
Query: 197 MRESRRYKEKKE-VVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+R+K+KKE VEPEADPERDQRTVFAYQ+ L+ATERDVYEFFS+AGKVRDVR+IMD
Sbjct: 206 AYWRKRHKDKKEDKVEPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMD 265
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
R SRRS+G+G ++F+
Sbjct: 266 RISRRSRGIG---------------------YVEFY------------------------ 280
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTAT--GPY 373
D MSVPMAIALSGQ LLGQPVMVKPSEAEKNLVQS T+A G GPY
Sbjct: 281 -----------DTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPY 329
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
R+LYVGNLH NM+E LRK+FE FG VELVQ+P D ETG CKGFGFVQFA+LE A+
Sbjct: 330 SGGARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQFARLEDAR 388
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV------GTQDTAAKSADFDDDDGGGLALNAQSRA 487
A + LNG+LEI GR +KVS+VTD TQ T D +LNAQSRA
Sbjct: 389 NALN-LNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGL----SLNAQSRA 443
Query: 488 LLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTA--PVIPN- 544
LLMQKLDR+G A+S L A + NG +++ P + Q + P A A +IP
Sbjct: 444 LLMQKLDRSGTASSTG--LTTAASFNGGVSTISSLAAPALVQGSFPAVAGLAGSGIIPGV 501
Query: 545 MAAEF--IGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAG 602
+ A F IG PSECLLLKNMFDP+ ET+ DFD +I+ DV+EECSK+G++ HI+VDK S G
Sbjct: 502 IPAGFDPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDKNSVG 561
Query: 603 FVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
FVYLRFE+ +AA AQRA+H RWFA ++I+A +M E YEAKF
Sbjct: 562 FVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKF 604
>gi|302790311|ref|XP_002976923.1| hypothetical protein SELMODRAFT_151471 [Selaginella moellendorffii]
gi|302797811|ref|XP_002980666.1| hypothetical protein SELMODRAFT_178258 [Selaginella moellendorffii]
gi|300151672|gb|EFJ18317.1| hypothetical protein SELMODRAFT_178258 [Selaginella moellendorffii]
gi|300155401|gb|EFJ22033.1| hypothetical protein SELMODRAFT_151471 [Selaginella moellendorffii]
Length = 532
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 285/649 (43%), Positives = 360/649 (55%), Gaps = 127/649 (19%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
M+FDEYEYLEKTVE S+ + + +E++ + + RS K
Sbjct: 1 MDFDEYEYLEKTVE-----------SAAAAGATAGANGEGAKAVAAAEDDGHKSEHRSSK 49
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEK 120
RSR DE+ RDRD+G DRE+ R +
Sbjct: 50 RSRGDEE-------------------------RDRDKG---------DREKRSRREHRSS 75
Query: 121 ERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELER 180
ER + RDR + ++E+ R R + S R + R R+ E+E E +
Sbjct: 76 RYEREKDRDRGRGDDKEKSERDRDRDRDKERSRSRRDDRDKDSRRHSRDKEKE-ERASSK 134
Query: 181 ERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEF 240
+RE++++ R+ RE R KE+ E E DPERDQRTVFA+Q+ LKA E+ VY+F
Sbjct: 135 DREKDKDFRKS------RERRDRKEESAPAESEPDPERDQRTVFAWQICLKADEKHVYDF 188
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVF 300
FSKAGKVRDVRLIMDRNSRRSKGVG I+F+
Sbjct: 189 FSKAGKVRDVRLIMDRNSRRSKGVG---------------------YIEFY--------- 218
Query: 301 FLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQ 360
D MSVP+A+ L+ Q LLGQ VMVKPSEAEKNLV
Sbjct: 219 --------------------------DAMSVPLALQLNNQPLLGQNVMVKPSEAEKNLVH 252
Query: 361 SNTSAGGTA--TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQC 418
S + GPY R+LYVGNLH N+TE QLR++FEPFG +ELVQLPLD ETG C
Sbjct: 253 SASGGSAAGAFNGPYSGGARRLYVGNLHVNITEDQLRQVFEPFGVIELVQLPLDQETGLC 312
Query: 419 KGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGG 478
KG+GFVQ+++LE A+AAQ LNG LE+ GR +KVS+VTD QD D DDD+GGG
Sbjct: 313 KGYGFVQYSKLEDARAAQQGLNGILELAGRAIKVSAVTDQQTGQDIGTTQNDLDDDEGGG 372
Query: 479 LALNAQSRALLMQKLDRTGIATSIAGSLGV-APAVNGSAVNQQAISL-PVVGQPAVPVPA 536
LALNA+SRALLMQKLDR+G GV APA S Q +++ PV G +
Sbjct: 373 LALNARSRALLMQKLDRSG---------GVGAPA---SLQPQAPMAVPPVYGGIGSALSM 420
Query: 537 VTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYV 596
V+P E IG PSECLLLKNMFDPA ETDP+FD++I+ DV++ECSK+G VKHI V
Sbjct: 421 QNGSVLPE---EPIGPPSECLLLKNMFDPATETDPEFDIDIKNDVQDECSKFGPVKHISV 477
Query: 597 DKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
DK S G VY+RF + A +AQ ++ RWFA + I A FM + YE KF
Sbjct: 478 DKYSQGHVYVRFGTAIDALAAQLNLNKRWFAGKTIRATFMNVQVYEEKF 526
>gi|297836410|ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata]
gi|297331927|gb|EFH62346.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata]
Length = 557
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 299/656 (45%), Positives = 377/656 (57%), Gaps = 116/656 (17%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
M+FDEYEYLEKTVE + + + +K K E + + E++E
Sbjct: 1 MDFDEYEYLEKTVENPHLENEVGNGGGDEKVKSEGRERSRSSRHRGDEKKE--------- 51
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEK 120
RDEDE+ + RDR R R+R+RE + D+E R +
Sbjct: 52 ---RDEDEDGRRSKRSRSHHRSRSRDRERDRHRSSREHRDRDREKDIDKEE----RNGKD 104
Query: 121 ERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELE- 179
R++ K R+ E+D RRS SRS R SQ ERE+ LE+E
Sbjct: 105 RERDRDKDRDGKGRDHEKDRSRRSRSRSERHRSQ----------------EREKSLEIEP 148
Query: 180 RERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYE 239
+ERE + R+R R + +E + VEPEADPERDQRTVFAYQ+ L+ATERDVYE
Sbjct: 149 KERETKDRDRDRRRHKDKKEDK--------VEPEADPERDQRTVFAYQIALRATERDVYE 200
Query: 240 FFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMV 299
FFS+AGKVRDVR+IMDR SRRS+G+G ++F+
Sbjct: 201 FFSRAGKVRDVRIIMDRISRRSRGIG---------------------YVEFY-------- 231
Query: 300 FFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLV 359
D MSVPMAIALSGQ LLGQPVMVKPSEAEKNLV
Sbjct: 232 ---------------------------DTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLV 264
Query: 360 QSNTSAGGTAT--GPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQ 417
QS T+A G GPY R+LYVGNLH NM+E LRK+FEPFG VELVQ+P D ETG
Sbjct: 265 QSTTAAAGAGGMLGPYSGGARRLYVGNLHINMSEDDLRKVFEPFGSVELVQVPRD-ETGL 323
Query: 418 CKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHV------GTQDTAAKSADF 471
CKGFGFVQFA+LE A+ A + LNG+LEI GR +KVS+VTD TQ T D
Sbjct: 324 CKGFGFVQFARLEDARNALN-LNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDD 382
Query: 472 DDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPA 531
+LNAQSRALLMQKLDR+G A+S L A +++G +++ P + Q +
Sbjct: 383 GGGL----SLNAQSRALLMQKLDRSGTASSTG--LTTAASIHGGVSTISSLAAPALVQGS 436
Query: 532 VPVPA--VTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYG 589
P A A +IP + + +G PSECLLLKNMFDP+ +T+ DFD +I+ DV+EECSK+G
Sbjct: 437 FPAVAGLAGAGIIPGV-IDPVGVPSECLLLKNMFDPSTQTEDDFDKDIEEDVKEECSKFG 495
Query: 590 RVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+ HIYVDK S GFVYLRFE+ +AA AQRA+H RWFA ++I+A +M YEAKF
Sbjct: 496 NLNHIYVDKNSVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTVAYEAKF 551
>gi|334184261|ref|NP_001189537.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251465|gb|AEC06559.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 599
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 307/683 (44%), Positives = 382/683 (55%), Gaps = 128/683 (18%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
M+FDEYEYLEKTVE + + + +K K E K ERS R R K
Sbjct: 1 MDFDEYEYLEKTVENPHLENEVGNGGGDEKVKSEGK-ERSRSSRH-----------RGDK 48
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEK 120
+ RDEDE+ + RDR R R+R+RE + D+E R +
Sbjct: 49 KKERDEDEDGRRSKRSRSHHRSRSRDRERDRHRSSREHRDRDREKDVDKEE----RNGKD 104
Query: 121 ERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELER 180
R++ K R+ E+D RRS SRS R SQ ERE+ LE+E
Sbjct: 105 RERDRDKDRDSKGRDHEKDRSRRSRSRSERHRSQ----------------EREKSLEIE- 147
Query: 181 ERERERELRERERD---------------------LEMRESR---RYKEKKE-VVEPEAD 215
+ERE ++R+RD L R+ R+K+KKE VEPEAD
Sbjct: 148 --PKERETKDRDRDRRFILMLLGPLVLPSVQLDGALPCRDFSCFIRHKDKKEDKVEPEAD 205
Query: 216 PERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGN 275
PERDQRTVFAYQ+ L+ATERDVYEFFS+AGKV
Sbjct: 206 PERDQRTVFAYQIALRATERDVYEFFSRAGKV---------------------------- 237
Query: 276 TLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAI 335
C + F V +V ++ + + + Y+EFYD MSVPMAI
Sbjct: 238 ---------CPFLCRFHVRDVRIIMDRISRRSRGI----------GYVEFYDTMSVPMAI 278
Query: 336 ALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTAT--GPYGAIDRKLYVGNLHFNMTETQ 393
ALSGQ LLGQPVMVKPSEAEKNLVQS T+A G GPY R+LYVGNLH NM+E
Sbjct: 279 ALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSGGARRLYVGNLHINMSEDD 338
Query: 394 LRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVS 453
LRK+FE FG VELVQ+P D ETG CKGFGFVQFA+LE A+ A + LNG+LEI GR +KVS
Sbjct: 339 LRKVFESFGSVELVQVPRD-ETGLCKGFGFVQFARLEDARNALN-LNGQLEIAGRAIKVS 396
Query: 454 SVTDHV------GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLG 507
+VTD TQ T D +LNAQSRALLMQKLDR+G A+S L
Sbjct: 397 AVTDQTEVPEAGQTQTTGDLDDDDGGGL----SLNAQSRALLMQKLDRSGTASSTG--LT 450
Query: 508 VAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAP--VIPN-MAAEF--IGSPSECLLLKNM 562
A + NG +++ P + Q + P A A +IP + A F IG PSECLLLKNM
Sbjct: 451 TAASFNGGVSTISSLAAPALVQGSFPAVAGLAGSGIIPGVIPAGFDPIGVPSECLLLKNM 510
Query: 563 FDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMH 622
FDP+ ET+ DFD +I+ DV+EECSK+G++ HI+VDK S GFVYLRFE+ +AA AQRA+H
Sbjct: 511 FDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDKNSVGFVYLRFENAQAAIGAQRALH 570
Query: 623 MRWFARRLISAIFMKPEDYEAKF 645
RWFA ++I+A +M E YEAKF
Sbjct: 571 GRWFAGKMITATYMTTEAYEAKF 593
>gi|125532099|gb|EAY78664.1| hypothetical protein OsI_33765 [Oryza sativa Indica Group]
Length = 549
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 319/652 (48%), Positives = 394/652 (60%), Gaps = 112/652 (17%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
MEFDEYEYLEKTVE + S + ++++ R ++EE R K
Sbjct: 1 MEFDEYEYLEKTVEPS--------APSTNGSGEKDRAGSRRRSSGGGRDDEE----RGSK 48
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEK 120
RSR S DRDRDRDR + RDRD G+E+ER + RSR ++ EK
Sbjct: 49 RSR--------SGEDRDRDRDRHRGGGGGREHRDRDDGKEKERSS-----RSR-VKDGEK 94
Query: 121 ERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELER 180
+R + +DR KE E++R +R S R + R S R E R E E+ R
Sbjct: 95 DRGKDGEKDRSKEAEKDRSRDRDRDRDSERDRRRERDSGRERRSSSRPERRRTEEEEMVR 154
Query: 181 ERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEF 240
E ++ERE +R RD R+ RR K+ EPEADPERDQRTVFA+Q+ LKA ERDVYEF
Sbjct: 155 ELQKERERSDRNRDYRDRDVRRRKDDG--AEPEADPERDQRTVFAFQLSLKADERDVYEF 212
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVF 300
FS+AGKVRDVRLIMDRNSRRSKGVG I+F+
Sbjct: 213 FSRAGKVRDVRLIMDRNSRRSKGVG---------------------YIEFY--------- 242
Query: 301 FLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQ 360
D MSVPMAIAL+GQ+LLGQ VMVKPSEAEKNLVQ
Sbjct: 243 --------------------------DAMSVPMAIALTGQVLLGQQVMVKPSEAEKNLVQ 276
Query: 361 SNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKG 420
SN ++GG A+G GA RKLYVGNLH N+TE QLR++FEPFG VELVQLP
Sbjct: 277 SNVASGGIASG--GA--RKLYVGNLHSNITEDQLRQVFEPFGQVELVQLP---------- 322
Query: 421 FGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLA 480
FA+LE AKAAQS LNG+L+I GR +KVS+VT+ G Q A + D DDD+GGGLA
Sbjct: 323 -----FARLEDAKAAQS-LNGQLDIAGRVIKVSAVTEQAGLQVGGATTGDLDDDEGGGLA 376
Query: 481 LNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGS----AVNQQAISLPVVG--QPAVP- 533
LNA SRA+LM+KLDR+G ATSI G +G+ P VN S + + LP QP +P
Sbjct: 377 LNASSRAMLMRKLDRSGTATSITGGIGI-PGVNTSVELPSASVTGAPLPTTSLIQPTIPA 435
Query: 534 VPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKH 593
+ V IP + IGSP+E LLLKNMFDPA+ETDPDFDL+I+ DV++ECSK+G V H
Sbjct: 436 IGTVPGIQIPGTQSADIGSPTEFLLLKNMFDPAVETDPDFDLDIKDDVQDECSKFGAVNH 495
Query: 594 IYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
I+VDK +AGFVYL F+S AA +AQRA+H RWFA ++I+A FM + Y+ KF
Sbjct: 496 IFVDKNTAGFVYLHFDSVAAATAAQRALHGRWFAGKMITATFMTAQQYKMKF 547
>gi|20466772|gb|AAM20703.1| putative splicing factor [Arabidopsis thaliana]
Length = 420
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 244/459 (53%), Positives = 293/459 (63%), Gaps = 78/459 (16%)
Query: 201 RRYKEKKE-VVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSR 259
RR+K+KKE VEPEADPERDQRTVFAYQ+ L+ATERDVYEFFS+AGKVRDVR+IMDR SR
Sbjct: 20 RRHKDKKEDKVEPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISR 79
Query: 260 RSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVS 319
RS+G+G ++F+ V M
Sbjct: 80 RSRGIG---------------------YVEFYDTMSVPM--------------------- 97
Query: 320 YRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTAT--GPYGAID 377
AIALSGQ LLGQPVMVKPSEAEKNLVQS T+A G GPY
Sbjct: 98 --------------AIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSGGA 143
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 437
R+LYVGNLH NM+E LRK+FE FG VELVQ+P D ETG CKGFGFVQFA+LE A+ A +
Sbjct: 144 RRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQFARLEDARNALN 202
Query: 438 ALNGKLEIVGRTLKVSSVTDHV------GTQDTAAKSADFDDDDGGGLALNAQSRALLMQ 491
LNG+LEI GR +KVS+VTD TQ T D +LNAQSRALLMQ
Sbjct: 203 -LNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGL----SLNAQSRALLMQ 257
Query: 492 KLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTA--PVIPN-MAAE 548
KLDR+G A+S L A + NG +++ P + Q + P A A +IP + A
Sbjct: 258 KLDRSGTASSTG--LTTAASFNGGVSTISSLAAPALVQGSFPAVAGLAGSGIIPGVIPAG 315
Query: 549 F--IGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYL 606
F IG PSECLLLKNMFDP+ ET+ DFD +I+ DV+EECSK+G++ HI+VDK S GFVYL
Sbjct: 316 FDPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDKNSVGFVYL 375
Query: 607 RFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
RFE+ +AA AQRA+H RWFA ++I+A +M E YEAKF
Sbjct: 376 RFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKF 414
>gi|224080644|ref|XP_002306193.1| predicted protein [Populus trichocarpa]
gi|222849157|gb|EEE86704.1| predicted protein [Populus trichocarpa]
Length = 348
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/338 (65%), Positives = 259/338 (76%), Gaps = 20/338 (5%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA-GGTATGPYGAIDRKL 380
YIEFYD MSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQS T+ G TGPY R+L
Sbjct: 13 YIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSTTAVTSGGLTGPYSGGARRL 72
Query: 381 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 440
YVGNLHFN+TE QLR++FEPFG VELVQLP D E+G CKGFGFVQFA+LE A+ A + LN
Sbjct: 73 YVGNLHFNITEDQLRQVFEPFGAVELVQLPHD-ESGHCKGFGFVQFARLEDARNALN-LN 130
Query: 441 GKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIAT 500
G++EI GR +KVS+VTD GTQD DFDDD+GGGLALNA+SRALLMQKLDRTG A+
Sbjct: 131 GQVEIAGRPIKVSAVTDQTGTQDGGTNVGDFDDDEGGGLALNARSRALLMQKLDRTGTAS 190
Query: 501 SIAGSLGV-----APAVNGSAVNQQAI------SLPVVGQPAVPVPAVTAPV--IPNMAA 547
SIAGSLG AP + + V A+ S+P + P +PVP + P IP M
Sbjct: 191 SIAGSLGTPTLPTAPILGATPVVSPAVAPLLSGSVPAI--PGLPVPGLQLPATAIPTM-- 246
Query: 548 EFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLR 607
+ IG PS+CL LKNMFDP ET+PDFDL+I+ DV+EECS++G VKHIYVDK SAGFVY+R
Sbjct: 247 DTIGVPSDCLFLKNMFDPKTETEPDFDLDIKEDVQEECSRFGNVKHIYVDKNSAGFVYMR 306
Query: 608 FESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
FE+ +AA +AQ A+H RWFA +LI+A FM P+ YEAKF
Sbjct: 307 FENMQAAINAQHALHGRWFAGKLITATFMVPQTYEAKF 344
>gi|414871305|tpg|DAA49862.1| TPA: hypothetical protein ZEAMMB73_656561 [Zea mays]
Length = 487
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 289/612 (47%), Positives = 340/612 (55%), Gaps = 139/612 (22%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
MEFDEYEYLEK VE Q S S +K +R R+RE E
Sbjct: 1 MEFDEYEYLEKAVEPAPPQANGSGSGSGEK-------DRGSRRREGGE------------ 41
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEK 120
DR +R R DRDRDR
Sbjct: 42 --------------------DRISKRSRSGEDRDRDR----------------------- 58
Query: 121 ERERRERRDREKE---RERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELE 177
R RE RDR+K+ ER R+ + R R + R R R R R
Sbjct: 59 HRSGREHRDRDKDDVKEERSRESRGKDRDREGREREKERGDRHRLREREVERERRSRSRS 118
Query: 178 LERERERERELRERERDLEMRESRRYKEKKEV------VEPEADPERDQRTVFAYQMPLK 231
R E E +RE ER+ E E Y+++ EPE DPERDQRTVFA+Q+ LK
Sbjct: 119 ERRRAEEEEMVRELERERERSERHHYRDRDVRRRKDDGAEPEVDPERDQRTVFAFQLSLK 178
Query: 232 ATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFF 291
A ERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVG I+F+
Sbjct: 179 ADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG---------------------YIEFY 217
Query: 292 LVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKP 351
DVMSVPMAIALSGQ LLGQ VMVKP
Sbjct: 218 -----------------------------------DVMSVPMAIALSGQPLLGQAVMVKP 242
Query: 352 SEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPL 411
SEAEKNLVQSN ++GG A+G GA RKLYVGNLH N+TE QLR++FEPFG VELVQLP+
Sbjct: 243 SEAEKNLVQSNATSGGAASG--GA--RKLYVGNLHSNITEDQLRQVFEPFGQVELVQLPV 298
Query: 412 DIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADF 471
D TG CKG+GF+QFA+LE AKAAQS LNG+L+I GR +KVS+VTDHVG Q + A + D
Sbjct: 299 DPMTGLCKGYGFIQFARLEDAKAAQS-LNGQLDIAGRVIKVSAVTDHVGMQASGATTGDL 357
Query: 472 DDDDGGGLALNAQSRALLMQKLDRTGIATSIA---GSLGVA-PAVNGSAVNQQAISLPVV 527
DDD+GGGLALNA SRA LM KLDR+G ATS+ G+ GVA PA + A LP
Sbjct: 358 DDDEGGGLALNASSRAALMLKLDRSGTATSLTRGIGAAGVAVPATSVIGAPGAASLLPPT 417
Query: 528 GQPAVPVPAVTAPVIPNMAAEF-IGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECS 586
VP APV+P + +P+E LLLKNMFDPA+ETDPDFDL+I+ DV++ECS
Sbjct: 418 VAAVGSVPG--APVLPVTTQNVTMSTPTEFLLLKNMFDPALETDPDFDLDIRDDVQDECS 475
Query: 587 KYGRVKHIYVDK 598
K+G VKHI+VDK
Sbjct: 476 KFGAVKHIFVDK 487
>gi|168061001|ref|XP_001782480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666033|gb|EDQ52699.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 363
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/350 (58%), Positives = 246/350 (70%), Gaps = 29/350 (8%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTA---TGPYGAIDR 378
YIEFYD MSVPMAIALSGQLLL QPVMVKPSEAEKNLVQS T+ G GPY R
Sbjct: 13 YIEFYDAMSVPMAIALSGQLLLNQPVMVKPSEAEKNLVQSTTAVPGVTGGFIGPYSGGAR 72
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVGNLHFNMTE QLR++FEPFGPVELVQLP DIETGQ KG+GFVQ+A+LE A+AAQ
Sbjct: 73 RLYVGNLHFNMTEDQLRQVFEPFGPVELVQLPSDIETGQSKGYGFVQYARLEDARAAQQN 132
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGI 498
LNG LE+ GR +KVS+V+D +G +D + DDD+GGGL+LNA+SRALLMQKLDR+G
Sbjct: 133 LNG-LELAGRPIKVSAVSDQIGMEDMGVHPGELDDDEGGGLSLNARSRALLMQKLDRSGS 191
Query: 499 ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAV-PVPAVTAPVI--------------- 542
TS G+ PA A+ ++P P V P V P++
Sbjct: 192 GTSNTGA--TLPAAPVPALGLLGTAVPTGVTPLVRPPFFVQNPLVLAGAATGLGAAALGT 249
Query: 543 PNM-------AAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIY 595
P + A + IG PSE LLLKNMFDP+ E+DP+FDL+I+ DV++ECSK+G VKHI+
Sbjct: 250 PGLVMPPVVGAVDAIGQPSEYLLLKNMFDPSTESDPEFDLDIKEDVQDECSKFGAVKHIF 309
Query: 596 VDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
VDK SAG VYL FEST AA +AQRA+H RWFA ++I+A +M Y+ KF
Sbjct: 310 VDKNSAGHVYLCFESTPAAMAAQRALHGRWFAGKMITATYMSALAYQTKF 359
>gi|217074842|gb|ACJ85781.1| unknown [Medicago truncatula]
Length = 346
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/338 (62%), Positives = 253/338 (74%), Gaps = 22/338 (6%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATG---PYGAIDR 378
YIEFYDVMSVPMAIALSGQ LLGQPVMVKPSEAEKNLVQS S +G PY R
Sbjct: 13 YIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTASVVNGPSGNLGPYSGGAR 72
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVGNLH ++TE LR++FE FG VELVQ+PLD + G CKGFGFVQFA+LE AK AQS
Sbjct: 73 RLYVGNLHSSITEADLRRVFEAFGQVELVQMPLD-DIGHCKGFGFVQFARLEDAKNAQS- 130
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGI 498
LN +LEI GRT+KVS+VTD G Q+ + D DDD+GGGL+LNA SRALLMQKLDR+GI
Sbjct: 131 LNSQLEIGGRTIKVSAVTDQSGMQEFGGNTGDIDDDEGGGLSLNASSRALLMQKLDRSGI 190
Query: 499 ATSIAGSLGVAPAVNGSAVNQQA---------ISLPVVGQPA--VPVPAVTAPVIPNMAA 547
A+S+ G LG + VN + +N QA I P VG P + +P +T+P I
Sbjct: 191 ASSMVGLLGNS-VVNNTGLNLQAMGSIPAVALIPAPGVGMPGGGLQIPMLTSPTI----- 244
Query: 548 EFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLR 607
+ IG+PSECLLLKNMFDP E +PDFDL+++ DVE ECSK+G +KHIYVDKRSAGFVYLR
Sbjct: 245 DTIGTPSECLLLKNMFDPEDEKEPDFDLDVKEDVEAECSKFGNLKHIYVDKRSAGFVYLR 304
Query: 608 FESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
FE+T+ A SAQRA+H RWFA ++I+A FM P+ YE +F
Sbjct: 305 FENTQPAISAQRALHGRWFAGKMITASFMVPQLYEDRF 342
>gi|168048203|ref|XP_001776557.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672148|gb|EDQ58690.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 372
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/347 (59%), Positives = 248/347 (71%), Gaps = 37/347 (10%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTA---TGPYGAIDR 378
YIEFYD MSVPMAIALSGQLLL QPVMVKPSEAEKNLVQS T G A GPY R
Sbjct: 13 YIEFYDAMSVPMAIALSGQLLLNQPVMVKPSEAEKNLVQSTTVVPGVAGSFIGPYSGGAR 72
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVGNLHFNMTE QLR++FEPFGPVELVQLP DIETGQ KG+GFVQ+A+LE A+AAQ
Sbjct: 73 RLYVGNLHFNMTEDQLRQVFEPFGPVELVQLPSDIETGQSKGYGFVQYARLEDARAAQQN 132
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGI 498
LNG LE+ GR +KVS+V+D +G +D + DDD+GGGL+LNA+SRALLMQKLDR+G
Sbjct: 133 LNG-LELAGRPIKVSAVSDQIGMEDMGVHPGELDDDEGGGLSLNARSRALLMQKLDRSGT 191
Query: 499 ATSIAGSLGVAPA----VNGSAVNQQAISLPVVGQPAVPVPAVTAPVI------------ 542
TS+A +L APA + G+AV P V A P V P++
Sbjct: 192 GTSVASTLPAAPAPTLGLLGTAVP------PTVTPLARPPFFVQNPLVLAGAAPGLGAAA 245
Query: 543 ---------PNM--AAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRV 591
P++ A + IG PSE LLLKNMFDP+ E+DPDFD++I+ DV+EECSK+G V
Sbjct: 246 ALSSPALAMPSLTGAVDAIGQPSEYLLLKNMFDPSTESDPDFDMDIKDDVQEECSKFGVV 305
Query: 592 KHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKP 638
KHI+VDK SAG VYL F+S AA +AQRA+H RWFA ++I+A ++KP
Sbjct: 306 KHIFVDKNSAGHVYLCFDSIAAAMAAQRALHGRWFAGKMITATYLKP 352
>gi|222624209|gb|EEE58341.1| hypothetical protein OsJ_09449 [Oryza sativa Japonica Group]
Length = 565
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/345 (61%), Positives = 254/345 (73%), Gaps = 33/345 (9%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
YIEFYDVMSVPMAIALSGQLLLGQ VMVKPSEAEKNLVQSN S+ G A+ RKLY
Sbjct: 235 YIEFYDVMSVPMAIALSGQLLLGQQVMVKPSEAEKNLVQSNASSSGAAS----GGARKLY 290
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQ--FAQLEHAKAAQSAL 439
VGNLH N+TE QLR++FEPFG VELVQLPLD TG CKGFGFVQ FA+LE AKAAQS L
Sbjct: 291 VGNLHSNITEDQLRQVFEPFGQVELVQLPLDPLTGLCKGFGFVQASFARLEDAKAAQS-L 349
Query: 440 NGKLEIVGRTLK--VSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTG 497
NG+L+I GR +K VS+VTD G Q + + D DDD+GGGLALNA SRALLMQKLDR+G
Sbjct: 350 NGQLDIAGRVIKASVSAVTDQAGVQVSGVTTGDLDDDEGGGLALNASSRALLMQKLDRSG 409
Query: 498 IATSIAGSLGVAPAVNGSAVNQQAISLP---VVGQPAVPVPAVTAPVIPNMA-------- 546
+ TS+ G+A G+ +N ++ LP V+G P PV A P +P +
Sbjct: 410 VTTSLTA--GIA----GTGLNT-SVGLPPASVLGAP--PVAASVLPTVPGLGSVPGVSLP 460
Query: 547 ----AEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAG 602
A PSECLLLKNMFDP++ETDPDFDL+I+ DV+EECSK+G+VKHI+VDK ++G
Sbjct: 461 ITTQAIETAPPSECLLLKNMFDPSVETDPDFDLDIKDDVQEECSKFGQVKHIFVDKNTSG 520
Query: 603 FVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKFKS 647
FVYLRF+S AA SAQ+A+H RWFA ++I+A FM P+ Y KF S
Sbjct: 521 FVYLRFDSITAAMSAQKALHGRWFAGKMITATFMSPQQYSTKFPS 565
>gi|78708720|gb|ABB47695.1| splicing factor, CC1-like family protein, expressed [Oryza sativa
Japonica Group]
gi|215765085|dbj|BAG86782.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 339
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/336 (62%), Positives = 255/336 (75%), Gaps = 19/336 (5%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
YIEFYD MSVPMAIAL+GQ+LLGQ VMVKPSEAEKNLVQSN ++GG A+G GA RKLY
Sbjct: 13 YIEFYDAMSVPMAIALTGQVLLGQQVMVKPSEAEKNLVQSNVASGGIASG--GA--RKLY 68
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VGNLH N+TE QLR++FEPFG VELVQLP+D TG CKGFGF+QFA+LE AKAAQS LNG
Sbjct: 69 VGNLHSNITEDQLRQVFEPFGQVELVQLPVDPLTGLCKGFGFIQFARLEDAKAAQS-LNG 127
Query: 442 KLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATS 501
+L+I GR +KVS+VT+ G Q A + D DDD+GGGLALNA SRA+LM+KLDR+G ATS
Sbjct: 128 QLDIAGRVIKVSAVTEQAGLQVGGATTGDLDDDEGGGLALNASSRAMLMRKLDRSGTATS 187
Query: 502 IAGSLGVAPAVNGS----AVNQQAISLPVVG--QPAVP----VPAVTAPVIPNMAAEFIG 551
I G +G+ P VN S + + LP QP +P VP + IP + IG
Sbjct: 188 ITGGIGI-PGVNTSVELPSASVTGAPLPTTSLIQPTIPAIGTVPGIQ---IPGTQSADIG 243
Query: 552 SPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFEST 611
SP+E LLLKNMFDPA+ETDPDFDL+I+ DV++ECSK+G V HI+VDK +AGFVYL F+S
Sbjct: 244 SPTEFLLLKNMFDPAVETDPDFDLDIKDDVQDECSKFGAVNHIFVDKNTAGFVYLHFDSV 303
Query: 612 EAAASAQRAMHMRWFARRLISAIFMKPEDYEAKFKS 647
AA +AQRA+H RWFA ++I+A FM + Y+ KF +
Sbjct: 304 AAATAAQRALHGRWFAGKMITATFMTAQQYKMKFPN 339
>gi|293336330|ref|NP_001169267.1| uncharacterized protein LOC100383130 [Zea mays]
gi|223975957|gb|ACN32166.1| unknown [Zea mays]
gi|413934151|gb|AFW68702.1| hypothetical protein ZEAMMB73_109361 [Zea mays]
Length = 318
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/324 (63%), Positives = 248/324 (76%), Gaps = 16/324 (4%)
Query: 329 MSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFN 388
MSVPMAIALSGQ LLGQ VMVKPSEAEKNLVQSN ++GG A+G GA RKLYVGNLH N
Sbjct: 1 MSVPMAIALSGQPLLGQAVMVKPSEAEKNLVQSNATSGGAASG--GA--RKLYVGNLHSN 56
Query: 389 MTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGR 448
+TE QLR++FEPFG VELVQLPLD TG CKG+GF+QFA+LE AKAAQS LNG+L+I GR
Sbjct: 57 ITEDQLRQVFEPFGQVELVQLPLDAMTGLCKGYGFIQFARLEDAKAAQS-LNGQLDIAGR 115
Query: 449 TLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGV 508
+KVS+VTDHVG Q + A + D DDD+GGGLALNA SRA LM KLDR+G ATS+ G +G
Sbjct: 116 VIKVSAVTDHVGVQASGATTGDLDDDEGGGLALNASSRAALMLKLDRSGTATSLTGGIGA 175
Query: 509 A----PA--VNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGS-PSECLLLKN 561
A PA V G+A +S V +VP APV+P A I S P+E LLLKN
Sbjct: 176 AGVAVPATSVIGAAGAASLLSPTVSAVGSVP----GAPVLPITAQNVIMSTPTEFLLLKN 231
Query: 562 MFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAM 621
MFDP++ETDPDFDL+I+ DV++ECSK+G VKHI+VDK +AGFVYL+F+S AA AQ+A+
Sbjct: 232 MFDPSLETDPDFDLDIRDDVQDECSKFGAVKHIFVDKNTAGFVYLQFDSVTAAGKAQQAL 291
Query: 622 HMRWFARRLISAIFMKPEDYEAKF 645
H RWFA ++I+A FM ++Y KF
Sbjct: 292 HGRWFAGKMITATFMSDQEYSTKF 315
>gi|226509668|ref|NP_001142242.1| uncharacterized protein LOC100274411 [Zea mays]
gi|194690874|gb|ACF79521.1| unknown [Zea mays]
gi|194707772|gb|ACF87970.1| unknown [Zea mays]
gi|414871307|tpg|DAA49864.1| TPA: hypothetical protein ZEAMMB73_656561 [Zea mays]
gi|414871308|tpg|DAA49865.1| TPA: hypothetical protein ZEAMMB73_656561 [Zea mays]
Length = 318
Score = 367 bits (943), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 203/322 (63%), Positives = 243/322 (75%), Gaps = 12/322 (3%)
Query: 329 MSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFN 388
MSVPMAIALSGQ LLGQ VMVKPSEAEKNLVQSN ++GG A+G GA RKLYVGNLH N
Sbjct: 1 MSVPMAIALSGQPLLGQAVMVKPSEAEKNLVQSNATSGGAASG--GA--RKLYVGNLHSN 56
Query: 389 MTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGR 448
+TE QLR++FEPFG VELVQLP+D TG CKG+GF+QFA+LE AKAAQS LNG+L+I GR
Sbjct: 57 ITEDQLRQVFEPFGQVELVQLPVDPMTGLCKGYGFIQFARLEDAKAAQS-LNGQLDIAGR 115
Query: 449 TLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIA---GS 505
+KVS+VTDHVG Q + A + D DDD+GGGLALNA SRA LM KLDR+G ATS+ G+
Sbjct: 116 VIKVSAVTDHVGMQASGATTGDLDDDEGGGLALNASSRAALMLKLDRSGTATSLTRGIGA 175
Query: 506 LGVA-PAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEF-IGSPSECLLLKNMF 563
GVA PA + A LP VP APV+P + +P+E LLLKNMF
Sbjct: 176 AGVAVPATSVIGAPGAASLLPPTVAAVGSVPG--APVLPVTTQNVTMSTPTEFLLLKNMF 233
Query: 564 DPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHM 623
DPA+ETDPDFDL+I+ DV++ECSK+G VKHI+VDK +AGFVYL+F+S AAA AQ A+H
Sbjct: 234 DPALETDPDFDLDIRDDVQDECSKFGAVKHIFVDKNTAGFVYLQFDSVTAAAKAQNALHG 293
Query: 624 RWFARRLISAIFMKPEDYEAKF 645
RWFA ++I+A FM +Y KF
Sbjct: 294 RWFAGKMITATFMSALEYSTKF 315
>gi|413934152|gb|AFW68703.1| hypothetical protein ZEAMMB73_109361 [Zea mays]
Length = 300
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 235/324 (72%), Gaps = 34/324 (10%)
Query: 329 MSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFN 388
MSVPMAIALSGQ LLGQ VMVKPSEAEKNLVQSN ++GG A+G GA RKLYVGNLH N
Sbjct: 1 MSVPMAIALSGQPLLGQAVMVKPSEAEKNLVQSNATSGGAASG--GA--RKLYVGNLHSN 56
Query: 389 MTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGR 448
+TE QLR++FEPFG VELVQLPLD TG CKG+GF+QFA+LE AKAAQS LNG+L+I GR
Sbjct: 57 ITEDQLRQVFEPFGQVELVQLPLDAMTGLCKGYGFIQFARLEDAKAAQS-LNGQLDIAGR 115
Query: 449 TLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGV 508
+KVS+VTDHVG Q + GG SRA LM KLDR+G ATS+ G +G
Sbjct: 116 VIKVSAVTDHVGVQAS------------GG------SRAALMLKLDRSGTATSLTGGIGA 157
Query: 509 A----PA--VNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGS-PSECLLLKN 561
A PA V G+A +S V +VP APV+P A I S P+E LLLKN
Sbjct: 158 AGVAVPATSVIGAAGAASLLSPTVSAVGSVP----GAPVLPITAQNVIMSTPTEFLLLKN 213
Query: 562 MFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAM 621
MFDP++ETDPDFDL+I+ DV++ECSK+G VKHI+VDK +AGFVYL+F+S AA AQ+A+
Sbjct: 214 MFDPSLETDPDFDLDIRDDVQDECSKFGAVKHIFVDKNTAGFVYLQFDSVTAAGKAQQAL 273
Query: 622 HMRWFARRLISAIFMKPEDYEAKF 645
H RWFA ++I+A FM ++Y KF
Sbjct: 274 HGRWFAGKMITATFMSDQEYSTKF 297
>gi|78708721|gb|ABB47696.1| splicing factor, CC1-like family protein, expressed [Oryza sativa
Japonica Group]
gi|215695222|dbj|BAG90413.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 320
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 203/329 (61%), Positives = 249/329 (75%), Gaps = 19/329 (5%)
Query: 329 MSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFN 388
MSVPMAIAL+GQ+LLGQ VMVKPSEAEKNLVQSN ++GG A+G GA RKLYVGNLH N
Sbjct: 1 MSVPMAIALTGQVLLGQQVMVKPSEAEKNLVQSNVASGGIASG--GA--RKLYVGNLHSN 56
Query: 389 MTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGR 448
+TE QLR++FEPFG VELVQLP+D TG CKGFGF+QFA+LE AKAAQS LNG+L+I GR
Sbjct: 57 ITEDQLRQVFEPFGQVELVQLPVDPLTGLCKGFGFIQFARLEDAKAAQS-LNGQLDIAGR 115
Query: 449 TLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGV 508
+KVS+VT+ G Q A + D DDD+GGGLALNA SRA+LM+KLDR+G ATSI G +G+
Sbjct: 116 VIKVSAVTEQAGLQVGGATTGDLDDDEGGGLALNASSRAMLMRKLDRSGTATSITGGIGI 175
Query: 509 APAVNGS----AVNQQAISLPVVG--QPAVP----VPAVTAPVIPNMAAEFIGSPSECLL 558
P VN S + + LP QP +P VP + IP + IGSP+E LL
Sbjct: 176 -PGVNTSVELPSASVTGAPLPTTSLIQPTIPAIGTVPGIQ---IPGTQSADIGSPTEFLL 231
Query: 559 LKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQ 618
LKNMFDPA+ETDPDFDL+I+ DV++ECSK+G V HI+VDK +AGFVYL F+S AA +AQ
Sbjct: 232 LKNMFDPAVETDPDFDLDIKDDVQDECSKFGAVNHIFVDKNTAGFVYLHFDSVAAATAAQ 291
Query: 619 RAMHMRWFARRLISAIFMKPEDYEAKFKS 647
RA+H RWFA ++I+A FM + Y+ KF +
Sbjct: 292 RALHGRWFAGKMITATFMTAQQYKMKFPN 320
>gi|217074578|gb|ACJ85649.1| unknown [Medicago truncatula]
gi|388499396|gb|AFK37764.1| unknown [Medicago truncatula]
Length = 365
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 243/449 (54%), Positives = 283/449 (63%), Gaps = 92/449 (20%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREE-KSERSYRKREDSEEEEEEEKSRSG 59
M+FDEYEYLEKTVEEQ +D DSS KK + KSER+YRK ++ + E RS
Sbjct: 1 MDFDEYEYLEKTVEEQ---PEDKDSSKKKNTDITDIKSERTYRKHGIDDDLDGGEDRRS- 56
Query: 60 KRSRRDEDEENGSRRDRDRDRDRDKERHR------RDRDRDRDRG-RERERETERDRERS 112
KRSR D+ENGS++DRDRDRDR+++R R R+RD +RG RE+ERE + +R
Sbjct: 57 KRSR-GGDDENGSKKDRDRDRDRERDREHRERSSGRHRERDGERGSREKEREKDVERGGR 115
Query: 113 RERREKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESER 172
+ R++E+E+ER R ++ RD ER R + R S SR ER+R
Sbjct: 116 DKERDREREKERERRDKEREKERERRDKEREKERAEREKEEKERPRRSMSRPERDRG--- 172
Query: 173 ERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKA 232
ERD E R+ RR+++KKE VEPEADPERDQRTVFAYQMPLKA
Sbjct: 173 -------------------ERDFENRDGRRFRDKKENVEPEADPERDQRTVFAYQMPLKA 213
Query: 233 TERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFL 292
TERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG I+F+
Sbjct: 214 TERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG---------------------YIEFY- 251
Query: 293 VAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPS 352
D MSVPMAIALSGQLLLGQPVMVKPS
Sbjct: 252 ----------------------------------DAMSVPMAIALSGQLLLGQPVMVKPS 277
Query: 353 EAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLD 412
EAEKNLVQSN S+G GPYGA+DRKLYVGNLHFNMTE LR++FEPFG +E+VQLPLD
Sbjct: 278 EAEKNLVQSNASSGAAVVGPYGAVDRKLYVGNLHFNMTEANLREIFEPFGQIEVVQLPLD 337
Query: 413 IETGQCKGFGFVQFAQLEHAKAAQSALNG 441
+ETG CKGFGFVQFA LEHAKAAQS LNG
Sbjct: 338 METGHCKGFGFVQFAHLEHAKAAQS-LNG 365
>gi|414871306|tpg|DAA49863.1| TPA: hypothetical protein ZEAMMB73_656561 [Zea mays]
Length = 357
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 203/361 (56%), Positives = 243/361 (67%), Gaps = 51/361 (14%)
Query: 329 MSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFN 388
MSVPMAIALSGQ LLGQ VMVKPSEAEKNLVQSN ++GG A+G GA RKLYVGNLH N
Sbjct: 1 MSVPMAIALSGQPLLGQAVMVKPSEAEKNLVQSNATSGGAASG--GA--RKLYVGNLHSN 56
Query: 389 MTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGR 448
+TE QLR++FEPFG VELVQLP+D TG CKG+GF+QFA+LE AKAAQS LNG+L+I GR
Sbjct: 57 ITEDQLRQVFEPFGQVELVQLPVDPMTGLCKGYGFIQFARLEDAKAAQS-LNGQLDIAGR 115
Query: 449 TLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIA---GS 505
+KVS+VTDHVG Q + A + D DDD+GGGLALNA SRA LM KLDR+G ATS+ G+
Sbjct: 116 VIKVSAVTDHVGMQASGATTGDLDDDEGGGLALNASSRAALMLKLDRSGTATSLTRGIGA 175
Query: 506 LGVA-PAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEF-IGSPSECLLLKNMF 563
GVA PA + A LP VP APV+P + +P+E LLLKNMF
Sbjct: 176 AGVAVPATSVIGAPGAASLLPPTVAAVGSVPG--APVLPVTTQNVTMSTPTEFLLLKNMF 233
Query: 564 DPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDK------------------------- 598
DPA+ETDPDFDL+I+ DV++ECSK+G VKHI+VDK
Sbjct: 234 DPALETDPDFDLDIRDDVQDECSKFGAVKHIFVDKCYYIFLKTGSTLEKIDLGQVNYNLD 293
Query: 599 --------------RSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAK 644
+AGFVYL+F+S AAA AQ A+H RWFA ++I+A FM +Y K
Sbjct: 294 AGSGICLGCPTIVVNTAGFVYLQFDSVTAAAKAQNALHGRWFAGKMITATFMSALEYSTK 353
Query: 645 F 645
F
Sbjct: 354 F 354
>gi|224103159|ref|XP_002312948.1| predicted protein [Populus trichocarpa]
gi|222849356|gb|EEE86903.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 207/417 (49%), Positives = 246/417 (58%), Gaps = 106/417 (25%)
Query: 230 LKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIK 289
LKA ERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVG I+
Sbjct: 5 LKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG---------------------YIE 43
Query: 290 FFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMV 349
F+ D MSVPMAIALSGQ LLGQPVMV
Sbjct: 44 FY-----------------------------------DAMSVPMAIALSGQPLLGQPVMV 68
Query: 350 KPSEAEKNLVQSNTS-AGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQ 408
KPSEAEKNLVQS T+ A G GPY R+LY+GNLHFN+TE QLR++FEPFG VELVQ
Sbjct: 69 KPSEAEKNLVQSTTAVASGGLIGPYTGGARRLYIGNLHFNITEDQLRQVFEPFGAVELVQ 128
Query: 409 LPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKS 468
LP D E G CKGFGFVQFA+LE A+ A + LNG++EI GR +KVS+VTD G QD
Sbjct: 129 LPHD-EGGHCKGFGFVQFARLEDARNALN-LNGQVEIAGRPIKVSAVTDQAGAQDGGTNV 186
Query: 469 ADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVG 528
DFDDD+GGGLALNA+SRALLMQKLDRTG A+SI GSLG P + + P++G
Sbjct: 187 GDFDDDEGGGLALNARSRALLMQKLDRTGTASSITGSLGT-PTLP---------TAPILG 236
Query: 529 QPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKY 588
PAV+ + P ++ + P L + + PA
Sbjct: 237 A----APAVSPAIAPLLSGSVLAIPG--LPVAGLQLPA---------------------- 268
Query: 589 GRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
SAGFVY+RFE+ + A +AQRA+H RWFA ++I+A FM P+ YEAKF
Sbjct: 269 ---------TNSAGFVYMRFENMQGAVNAQRALHGRWFAGKMITATFMVPQTYEAKF 316
>gi|388496342|gb|AFK36237.1| unknown [Medicago truncatula]
Length = 202
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 164/250 (65%), Positives = 177/250 (70%), Gaps = 57/250 (22%)
Query: 192 ERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVR 251
ERD E R+ RR+++KKE VEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVR
Sbjct: 10 ERDFENRDGRRFRDKKENVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVR 69
Query: 252 LIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVL 311
LIMDRNSRRSKGVG I+F+
Sbjct: 70 LIMDRNSRRSKGVG---------------------YIEFY-------------------- 88
Query: 312 DPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATG 371
D MSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN S+G G
Sbjct: 89 ---------------DAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASSGAAVVG 133
Query: 372 PYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEH 431
PYGA+DRKLYVGNLHFNMTE LR++FEPFG +E+VQLPLD+ETG CKGFGFVQFA LEH
Sbjct: 134 PYGAVDRKLYVGNLHFNMTEANLREIFEPFGQIEVVQLPLDMETGHCKGFGFVQFAHLEH 193
Query: 432 AKAAQSALNG 441
AKAAQS LNG
Sbjct: 194 AKAAQS-LNG 202
>gi|384252120|gb|EIE25597.1| splicing factor, CC1-like protein [Coccomyxa subellipsoidea C-169]
Length = 497
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 238/674 (35%), Positives = 313/674 (46%), Gaps = 207/674 (30%)
Query: 2 EFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKR 61
EFDEY YLEK +E + DD + K++ KRE+K
Sbjct: 3 EFDEYAYLEKQLEAKDANGHKDDGTHKRE-KREKK------------------------- 36
Query: 62 SRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKE 121
DR RDRD ER R RD+DRDR + RE R+K +
Sbjct: 37 ---------------DRTRDRDSERERT-RDQDRDR-----------KSSKREHRDKSPD 69
Query: 122 RERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERE 181
RER+ ERD R+ SSR R S RRER RE +
Sbjct: 70 RERKRHHSSHDHHRSERD--RKHSSRPR---------SLEKRRERTPPEVRE-------Q 111
Query: 182 RERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFF 241
RE+EREL+E +RD+ RTVFAY +PLKA ERD++EFF
Sbjct: 112 REKERELKELDRDI-------------------------RTVFAYNLPLKAEERDLFEFF 146
Query: 242 SKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFF 301
SKAG + DV++IMDRN+R+SKG I++ A++
Sbjct: 147 SKAGPIEDVKIIMDRNTRKSKGF---------------------AYIEYTNKADIVTAMA 185
Query: 302 LLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQS 361
L G Q+L+GQ VMVK SEAEKNL
Sbjct: 186 LTG-----------------------------------QILMGQAVMVKSSEAEKNLAWE 210
Query: 362 NTSA-----------GGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLP 410
A G TGP KLY+GNLH N+ E L+++FE FG VE + L
Sbjct: 211 AAQAQNASMLQMSTIGNAGTGPC-----KLYIGNLHPNIQEQDLKQVFEAFGAVEYITLQ 265
Query: 411 LDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGR--TLKVSSVTD-HVGTQDTAAK 467
D TG+ +G+GFVQ+ A A L+G L+I G ++K++ +T AA
Sbjct: 266 KD-PTGRSQGYGFVQYQTTPDATKAMQQLDG-LDIAGSQISVKIAPLTPAETAAAAAAAA 323
Query: 468 SADFDDDDG--GGLALNAQSRALLMQKLD-RTGIATSIAGSLGVAPAVNGSAVNQQAISL 524
D DD +G GGL L A +RA LMQ+L T + IA +LG
Sbjct: 324 GLDLDDAEGEHGGLKLTANARAALMQRLSGPTDLGVLIADALG----------------- 366
Query: 525 PVVGQPAVPVPAVTAPVIPNMAAEFIGS-----------PSECLLLKNMFDPAMETDPDF 573
P+ G PA+ VPA T V+ + A+ + P++CLLLKNMFDP ET+PD+
Sbjct: 367 PLPGPPAM-VPAGT--VVMSAGAQALAMEQGILGPSSPIPTQCLLLKNMFDPKEETEPDW 423
Query: 574 DLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
D EI DV EECSKYG V H +VDK S GFVYL+F + E +A+AQ+A+H RWFA R + A
Sbjct: 424 DQEIATDVTEECSKYGPVSHTHVDKNSKGFVYLKFVTVEGSAAAQKALHGRWFAGRQVVA 483
Query: 634 IFMKPEDYEAKFKS 647
F + Y + F++
Sbjct: 484 EFQFTQIYNSYFQT 497
>gi|108706237|gb|ABF94032.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
Length = 566
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 190/375 (50%), Positives = 229/375 (61%), Gaps = 92/375 (24%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
YIEFYDVMSVPMAIALSGQLLLGQ VMVKPSEAEKNLVQSN S+ G A+ RKLY
Sbjct: 235 YIEFYDVMSVPMAIALSGQLLLGQQVMVKPSEAEKNLVQSNASSSGAAS----GGARKLY 290
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VGNLH N+TE QLR QFA+LE AKAAQS LNG
Sbjct: 291 VGNLHSNITEDQLR-----------------------------QFARLEDAKAAQS-LNG 320
Query: 442 KLEIVGRTLK----------------------------------VSSVTDHVGTQDTAAK 467
+L+I GR +K VS+VTD G Q +
Sbjct: 321 QLDIAGRVIKASVFFRFTRIHVVFKLYISNIRVLPDTMLNCCNQVSAVTDQAGVQVSGVT 380
Query: 468 SADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLP-- 525
+ D DDD+GGGLALNA SRALLMQKLDR+G+ TS+ G+A G+ +N ++ LP
Sbjct: 381 TGDLDDDEGGGLALNASSRALLMQKLDRSGVTTSLTA--GIA----GTGLNT-SVGLPPA 433
Query: 526 -VVGQPAVPVPAVTAPVIPNMA------------AEFIGSPSECLLLKNMFDPAMETDPD 572
V+G P PV A P +P + A PSECLLLKNMFDP++ETDPD
Sbjct: 434 SVLGAP--PVAASVLPTVPGLGSVPGVSLPITTQAIETAPPSECLLLKNMFDPSVETDPD 491
Query: 573 FDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLIS 632
FDL+I+ DV+EECSK+G+VKHI+VDK ++GFVYLRF+S AA SAQ+A+H RWFA ++I+
Sbjct: 492 FDLDIKDDVQEECSKFGQVKHIFVDKNTSGFVYLRFDSITAAMSAQKALHGRWFAGKMIT 551
Query: 633 AIFMKPEDYEAKFKS 647
A FM P+ Y KF S
Sbjct: 552 ATFMSPQQYSTKFPS 566
>gi|223949785|gb|ACN28976.1| unknown [Zea mays]
gi|413957028|gb|AFW89677.1| hypothetical protein ZEAMMB73_900995 [Zea mays]
Length = 411
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 131/185 (70%), Positives = 146/185 (78%), Gaps = 7/185 (3%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
YIEFYD MSVPMAIALSGQLLLGQ VMVKPSEAEKNLVQSN S+G + RKLY
Sbjct: 210 YIEFYDAMSVPMAIALSGQLLLGQQVMVKPSEAEKNLVQSNASSGAASG-----GARKLY 264
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VGNLH N+ E QLR++FEPFG VELVQLPLD +G CKGFGFVQFA+LE AKAAQS LNG
Sbjct: 265 VGNLHSNINEDQLRQVFEPFGQVELVQLPLDPLSGLCKGFGFVQFARLEDAKAAQS-LNG 323
Query: 442 KLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATS 501
+LEI GR +KVS+VTD G Q + A + D DD++ GGLALNA SRALLMQKLDR+GI T
Sbjct: 324 QLEIAGRVIKVSAVTDQAGMQVSGA-TGDLDDEEAGGLALNASSRALLMQKLDRSGITTR 382
Query: 502 IAGSL 506
I L
Sbjct: 383 IQPPL 387
>gi|47223170|emb|CAG11305.1| unnamed protein product [Tetraodon nigroviridis]
Length = 515
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 170/474 (35%), Positives = 241/474 (50%), Gaps = 91/474 (19%)
Query: 180 RERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYE 239
R+R + R ++ER +R + + + + + PE ERD RTVF Q+ + RD+ +
Sbjct: 110 RKRSKTRSPVKKERS-PVRLDKTFIQPIDNLTPE---ERDARTVFCMQLAARIRARDLED 165
Query: 240 FFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMV 299
FFS GKVRDVR+I DRNSRRSKG+ I+F + V +
Sbjct: 166 FFSAVGKVRDVRIISDRNSRRSKGI---------------------AYIEFVESSSVPLA 204
Query: 300 FFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN-L 358
L G Q LLG P++V+ S+AEKN
Sbjct: 205 IGLTG-----------------------------------QRLLGVPIIVQASQAEKNRA 229
Query: 359 VQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQC 418
+ + ++GP +LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+
Sbjct: 230 AAAANNLQKGSSGPM-----RLYVGSLHFNITEEMLRGIFEPFGKIEGIQLMMDSETGRS 284
Query: 419 KGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG-- 476
KG+GF+ FA E AK A LNG E+ GR +KV VT+ D++ S+ D+D+
Sbjct: 285 KGYGFISFADAECAKKALEQLNG-FELAGRPMKVGHVTER---SDSSTASSILDNDELER 340
Query: 477 GGLALNAQSRALLMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVV-GQPAVPV 534
G+ L R LM +L + TG L + PA + ++S P + G PAVP
Sbjct: 341 TGIDLGTTGRLQLMARLAEGTG--------LKIPPAAQQALQMTGSMSFPTIGGPPAVPT 392
Query: 535 PAVTAPVIPNMAAEFIGSP--SECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVK 592
P+ P+ A P + CL L N+F+P E DP + +EIQ DV EEC+K+G V
Sbjct: 393 PS------PSQALNLPAQPLATHCLQLSNLFNPQAENDPSWAVEIQDDVIEECNKHGGVV 446
Query: 593 HIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
HIYVDK SA G VY++ S AA + A+H RWFA ++I+A ++ Y F
Sbjct: 447 HIYVDKNSAQGNVYVKCPSIPAAMATVNALHGRWFAGKMITAAYVPLPTYHNLF 500
>gi|413957027|gb|AFW89676.1| hypothetical protein ZEAMMB73_900995 [Zea mays]
Length = 396
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 129/179 (72%), Positives = 144/179 (80%), Gaps = 7/179 (3%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
YIEFYD MSVPMAIALSGQLLLGQ VMVKPSEAEKNLVQSN S+G + RKLY
Sbjct: 210 YIEFYDAMSVPMAIALSGQLLLGQQVMVKPSEAEKNLVQSNASSGAASG-----GARKLY 264
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VGNLH N+ E QLR++FEPFG VELVQLPLD +G CKGFGFVQFA+LE AKAAQS LNG
Sbjct: 265 VGNLHSNINEDQLRQVFEPFGQVELVQLPLDPLSGLCKGFGFVQFARLEDAKAAQS-LNG 323
Query: 442 KLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIAT 500
+LEI GR +KVS+VTD G Q + A + D DD++ GGLALNA SRALLMQKLDR+GI T
Sbjct: 324 QLEIAGRVIKVSAVTDQAGMQVSGA-TGDLDDEEAGGLALNASSRALLMQKLDRSGITT 381
>gi|410899827|ref|XP_003963398.1| PREDICTED: RNA-binding protein 39-like [Takifugu rubripes]
Length = 500
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 166/465 (35%), Positives = 233/465 (50%), Gaps = 90/465 (19%)
Query: 189 RERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVR 248
R + R +E ++ + + PE ERD RTVF Q+ + RD+ +FFS GKVR
Sbjct: 103 RSKSRSPVKKERSPIRQPIDNLTPE---ERDARTVFCMQLAARIRARDLEDFFSAVGKVR 159
Query: 249 DVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETY 308
DVR+I DRNSRRSKG+ I+F + V + L G
Sbjct: 160 DVRIISDRNSRRSKGIA---------------------YIEFVESSSVPLAIGLTG---- 194
Query: 309 TVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN-LVQSNTSAGG 367
Q LLG P++V+ S+AEKN + +
Sbjct: 195 -------------------------------QRLLGVPIIVQASQAEKNRAAAAANNLQK 223
Query: 368 TATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFA 427
++GP +LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ FA
Sbjct: 224 GSSGPM-----RLYVGSLHFNITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFA 278
Query: 428 QLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQS 485
E AK A LNG E+ GR +KV VT+ D++ S+ D+D+ G+ L
Sbjct: 279 DAECAKKALEQLNG-FELAGRPMKVGHVTER---SDSSTASSILDNDELERTGIDLGTTG 334
Query: 486 RALLMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVV-GQPAVPVPAVTAPVIP 543
R LM +L + TG L + PA + ++S P + G PAVP P+ P
Sbjct: 335 RLQLMARLAEGTG--------LKIPPAAQQALQMTGSMSFPTISGPPAVPTPS------P 380
Query: 544 NMAAEFIGSP--SECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA 601
+ A P + CL L N+F+P E DP + +EIQ DV EEC+K+G V HIYVDK S
Sbjct: 381 SQALNLPAQPLATHCLQLSNLFNPQAENDPSWAVEIQDDVIEECNKHGGVVHIYVDKNST 440
Query: 602 -GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
G VY++ S AA + A+H RWFA ++I+A ++ Y F
Sbjct: 441 QGNVYVKCPSIPAAMATVNALHGRWFAGKMITAAYVPLPTYHNLF 485
>gi|432865706|ref|XP_004070573.1| PREDICTED: RNA-binding protein 39-like [Oryzias latipes]
Length = 516
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 181/490 (36%), Positives = 248/490 (50%), Gaps = 96/490 (19%)
Query: 172 RERELELERERERERELRERERDLEMRE-----SRRYKEKKEVVEP--EADPE-RDQRTV 223
R +E R R ++R R + R +R+ S KE+ V +P PE RD RTV
Sbjct: 92 RSKEHHRSRSRSKDRTGRYKARKSPVRKRTKSRSPPKKERSPVRQPIDNLTPEERDARTV 151
Query: 224 FAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLIN 283
F Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 152 FCMQLAARIRARDLEDFFSAVGKVRDVRIISDRNSRRSKGIA------------------ 193
Query: 284 SCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLL 343
I+F ET +V P+AI L+GQ LL
Sbjct: 194 ---YIEFV--------------ETSSV---------------------PLAIGLTGQRLL 215
Query: 344 GQPVMVKPSEAEKNLVQSNTSA--GGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPF 401
G P++V+ S+AEKN + + G+A GP +LYVG+LHFN+TE LR +FEPF
Sbjct: 216 GVPIIVQASQAEKNRAAAAANNLQKGSA-GPM-----RLYVGSLHFNITEEMLRGIFEPF 269
Query: 402 GPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGT 461
G +E +QL +D ETG+ KG+GF+ FA E AK A LNG E+ GR +KV VT+ +
Sbjct: 270 GKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNG-FELAGRPMKVGHVTERSDS 328
Query: 462 QDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQ 520
TA+ D D+ + G+ L R LM +L + TG L + PA QQ
Sbjct: 329 -STASSFLDNDELERTGIDLGTTGRLQLMARLAEGTG--------LKIPPAA------QQ 373
Query: 521 AI----SLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLE 576
A+ S+P A +P N+ ++ + + CL L N+FDP E DP + E
Sbjct: 374 ALQMTGSIPFGNMAAPAIPTPAPSQALNLPSQPLA--THCLQLSNLFDPQAENDPAWASE 431
Query: 577 IQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIF 635
IQ DV EEC+K+G V HIYVDK S G VY++ S AA + A+H RWFAR++I+A +
Sbjct: 432 IQDDVIEECNKHGGVVHIYVDKNSPQGNVYVKCPSIPAAMATVNALHGRWFARKMITAAY 491
Query: 636 MKPEDYEAKF 645
+ Y F
Sbjct: 492 VPLPTYHNLF 501
>gi|321472566|gb|EFX83536.1| hypothetical protein DAPPUDRAFT_194972 [Daphnia pulex]
Length = 366
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 166/433 (38%), Positives = 225/433 (51%), Gaps = 87/433 (20%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNT 276
ERD RTVF Q+ + RD+ EFFS GKVRDVRLI +RR KG+
Sbjct: 5 ERDARTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLITCNKTRRFKGL------------ 52
Query: 277 LHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIA 336
C ++F +P +V P+AIA
Sbjct: 53 ---------CYVEF--------------------AEPESV---------------PLAIA 68
Query: 337 LSGQLLLGQPVMVKPSEAEKN-LVQSNTSAGGTAT-GPYGAIDRKLYVGNLHFNMTETQL 394
L+GQ L G P++V+P++AEKN L SN A + GP G + +LYVG+LHFN+TE L
Sbjct: 69 LTGQRLCGVPIVVQPTQAEKNRLAGSNMPAMSSFNKGPNGPM--RLYVGSLHFNITEDML 126
Query: 395 RKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSS 454
R +FEPFG +E +QL +D ETG+ KG+GF+ F E AK A LNG E+ GR +K++
Sbjct: 127 RSIFEPFGKIEHMQLMIDTETGRSKGYGFITFRNAEDAKKAMEQLNG-FELAGRPMKINH 185
Query: 455 VTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDR-TGIATSIAGSLGVAPAVN 513
VT+H T D D+ D G+ L A R LM KL + TG+ PA
Sbjct: 186 VTEHFTGNHT---YLDSDEMDRAGIDLGATGRLQLMAKLAQGTGLEI---------PAAA 233
Query: 514 GSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDF 573
SA+N QA Q A+PV +V P+ ++C +L NMFD + ET P +
Sbjct: 234 QSALNLQASIQ-AAQQQALPVASVAPPI-----------ATQCFMLSNMFDSSSETHPLW 281
Query: 574 DLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLIS 632
EI DV +EC+K+G V HIYVDK S G VY++ S A +A A+H RWFA R+I+
Sbjct: 282 HQEICDDVMDECNKHGGVLHIYVDKASPQGNVYVKCPSVTVAVNAVNALHGRWFAGRIIT 341
Query: 633 AIFMKPEDYEAKF 645
A ++ +Y + F
Sbjct: 342 AAYVPLINYHSLF 354
>gi|62122939|ref|NP_001014392.1| RNA binding motif protein 39b [Danio rerio]
gi|61402832|gb|AAH91794.1| RNA binding motif protein 39b [Danio rerio]
Length = 539
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 176/537 (32%), Positives = 257/537 (47%), Gaps = 109/537 (20%)
Query: 130 REKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELR 189
+E++R R R +R SR R+S ++ + ++ + + R+R R +
Sbjct: 76 KERKRSRSRSKDRGGRSRGRKSPFMGQKLNGGP----GGKTGPQHFPKHSRKRSRSKSPF 131
Query: 190 ERERDLEMRESRRYKEKKEVVEPEADP----ERDQRTVFAYQMPLKATERDVYEFFSKAG 245
++E+ ++ +K+ K V D ERD RTVF Q+ + RD+ +FFS G
Sbjct: 132 KKEKSPFKKDKSPFKKDKSPVRQPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVG 191
Query: 246 KVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGD 305
KVRDVR+I DRNSRRSKG+ ++F V + L G
Sbjct: 192 KVRDVRMISDRNSRRSKGI---------------------AYVEFVDSTSVPLAIGLTG- 229
Query: 306 ETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA 365
Q +LG P++V+ S+AEKN + S
Sbjct: 230 ----------------------------------QRVLGVPIIVQASQAEKNRAAAMASM 255
Query: 366 ---GGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFG 422
GG GP +LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+G
Sbjct: 256 LQRGG--AGPM-----RLYVGSLHFNITEDMLRGIFEPFGKIEGIQLMMDSETGRSKGYG 308
Query: 423 FVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLA 480
F+ FA E AK A LNG E+ GR +KV VT+ D ++ S+ D+D+ G+
Sbjct: 309 FISFADAECAKKALEQLNG-FELAGRPMKVGHVTER---SDASSASSFLDNDELERTGID 364
Query: 481 LNAQSRALLMQKL-DRTGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPA 531
L R LM +L + TG+ A ++GS+ N SA P
Sbjct: 365 LGTTGRLQLMARLAEGTGLQIPAAAKQALQMSGSVSFGNMPNASAT-----------PPL 413
Query: 532 VPVPAVTAPVIPNMAAEFIGSP--SECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYG 589
+P P + N A P + CL L NMF+P ME +P +D+EI+ DV EEC K+G
Sbjct: 414 IPNPGM------NQAMNLPTQPLATHCLQLSNMFNPQMENEPGWDIEIRDDVIEECRKHG 467
Query: 590 RVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
V HIYVDK SA G VY++ + A + ++H RWFA ++I+A ++ Y F
Sbjct: 468 GVIHIYVDKNSAQGNVYVKCPTIPVAMAVVSSLHGRWFAGKMITAAYVPLPTYHNLF 524
>gi|384498450|gb|EIE88941.1| hypothetical protein RO3G_13652 [Rhizopus delemar RA 99-880]
Length = 454
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 163/460 (35%), Positives = 230/460 (50%), Gaps = 102/460 (22%)
Query: 189 RERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVR 248
R+R R E +RR PE D RD+RTVF Q+ + T R+ FFS+AG+VR
Sbjct: 94 RKRSRTPERHTNRRGGRSPSPPVPEED--RDRRTVFVTQLAARLTTREFDAFFSQAGRVR 151
Query: 249 DVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETY 308
+ ++I DRNSR+SKG C ++F+ DET
Sbjct: 152 EAKIITDRNSRKSKG---------------------CGYVEFY-------------DET- 176
Query: 309 TVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAG 366
SV A+ALSGQ LLG PV+V+ SEAEKN + + +A
Sbjct: 177 ---------------------SVQNALALSGQKLLGIPVLVQLSEAEKNRLAMAAQRNAM 215
Query: 367 GTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF 426
G T P + ++LY+G+LHF++TE +R++FEPFGP++ V L D ETG+ KGFGF+Q+
Sbjct: 216 GVTTEP---LYQRLYIGSLHFSLTENDVRQIFEPFGPLDFVNLHKDPETGRSKGFGFIQY 272
Query: 427 AQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSR 486
AK A +NG E+ GR LKV V++ G T + DD++ GLALN+ SR
Sbjct: 273 KNANDAKQALEKMNG-FELAGRNLKVGLVSEKSG---TTMSTFGLDDEETEGLALNSLSR 328
Query: 487 ALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPA-VTAPVIPNM 545
A LM KL A P P+ PA V P IP
Sbjct: 329 AELMAKL---------------------------AARDPQNSPPSRHAPAPVLKPNIPTA 361
Query: 546 AAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVY 605
+ ++ +L NMF+P ETDPD+ +++ D++ EC KYGRV+HI V+ S G V+
Sbjct: 362 STRYV-------MLNNMFNPNEETDPDWVSDLEADIKIECEKYGRVEHIKVNSDSMGEVF 414
Query: 606 LRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
L+F+ +A A A++ RWF + I+A + Y A
Sbjct: 415 LKFDRVGSAEKAISALNGRWFGGKQITAACISDAIYNANI 454
>gi|440791603|gb|ELR12841.1| splicing factor, CC1like subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 594
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 183/518 (35%), Positives = 256/518 (49%), Gaps = 141/518 (27%)
Query: 196 EMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
E +E RR +++ E EAD RD+RTVFA +P++A+E +++EFF KAGKV D+RLI D
Sbjct: 150 EEQERRRKQKEAE----EAD--RDERTVFASNLPIRASESELFEFFGKAGKVHDIRLITD 203
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSR+SKG G I++ LD ++
Sbjct: 204 RNSRKSKGFG---------------------YIEY--------------------LDKSS 222
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGA 375
V ++ + GQ +L V+ ++AEKN + +A P +
Sbjct: 223 VPLALHQLN---------GTQCKGQTVL-----VQITQAEKNRAAAAAAAAAANAPPSLS 268
Query: 376 IDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAA 435
+LYVGNLH ++ E LR +FEPFG ++ + L +D ETG+ KGF FVQ+ E AK A
Sbjct: 269 APTRLYVGNLHTDLAEDDLRTVFEPFGDIQQINLHIDPETGRSKGFAFVQYKSPEDAKKA 328
Query: 436 QSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFD----------------------- 472
NG +E+ GR LKV V+D GT A
Sbjct: 329 LQHCNG-MELAGRQLKVGIVSDP-GTLTAGGPGAGLGGPIGFGGGGAFGGGGGFGGGGFG 386
Query: 473 ---------DDDGGGLALNAQSRALLMQKL-DRTGIA--TSIAGS-----------LGVA 509
DD+GGGL LNAQSRA+LM +L +TG A S+ G+ LG+
Sbjct: 387 GGGGGLNELDDEGGGLGLNAQSRAMLMARLAGQTGGAGFPSLPGAPMGFHGMTPAGLGLL 446
Query: 510 PAVNGSAVNQQAISLPVVGQPAVP-VPA------VTAPVIPNMAAEFIG--------SP- 553
P V LP +G P +P +P+ +P++P A + +P
Sbjct: 447 PGV-----------LPGLGMPGMPGLPSALGGLGAPSPLLPTAGAMPMPTPIIPPTVAPR 495
Query: 554 ----SECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRF 608
S +LLKNMFDPA ET+P+F L+IQ DV EECSKYG+V +V + S +G VYLRF
Sbjct: 496 PVVASAFMLLKNMFDPAQETEPNFHLDIQEDVTEECSKYGKVLQCHVVRDSPSGLVYLRF 555
Query: 609 ESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKFK 646
ES+E AA A +A++ RWFA ++ISA F+ + A K
Sbjct: 556 ESSEGAAKAIQALNGRWFAGKVISAEFIDENTFAAGCK 593
>gi|118788821|ref|XP_317010.3| AGAP008433-PA [Anopheles gambiae str. PEST]
gi|116122929|gb|EAA12873.4| AGAP008433-PA [Anopheles gambiae str. PEST]
Length = 526
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 181/555 (32%), Positives = 253/555 (45%), Gaps = 108/555 (19%)
Query: 112 SRERREKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESE 171
S++ R R R + R R K+R + R RR S+ RS + R S RRE E
Sbjct: 43 SKKHRSGSPGRNRDKERRRSKDRSKSRSPARRDRSKD-RSKEKDRGKSDHHRREVVVEKR 101
Query: 172 RERE--------------------LELERERERERELRERERDLEMRESRRYKEKKEVVE 211
R R+ R + + R Y + +E
Sbjct: 102 RSRDRVDHRRRSRERDYRRRSRSRDGGRGMGRGRRSMSPKPYRGRGRGGSGYYRDRSPLE 161
Query: 212 PEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMR 271
+ +RD RTVF Q+ + RD+ EFFS GKVRDVRLI ++R KG+
Sbjct: 162 EMSQEDRDARTVFCMQLSQRIHARDLEEFFSSVGKVRDVRLITCNKTKRFKGI------- 214
Query: 272 DDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSV 331
I+F DP +V +
Sbjct: 215 --------------AYIEF--------------------KDPESVAL------------- 227
Query: 332 PMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTE 391
A+ LSGQ LLG P+ V+ ++AEKN + S P G + +LYVG+LHFN+TE
Sbjct: 228 --ALGLSGQKLLGIPISVQHTQAEKNRMASQPPV-APPKNPSGPM--RLYVGSLHFNITE 282
Query: 392 TQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLK 451
L +FEPFG ++ +QL +D +TG+ KG+GF+ F + AK A LNG E+ GR +K
Sbjct: 283 DMLNGIFEPFGKIDNIQLIMDADTGRSKGYGFITFHNADDAKKALEQLNG-FELAGRPMK 341
Query: 452 VSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPA 511
V +VT+ + T S D D+ D G+ L A R LM KL A G+A
Sbjct: 342 VGNVTERLDV--TTHASLDTDEMDRSGIELGATGRLQLMFKL---------AEGAGLAVP 390
Query: 512 VNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDP 571
+ PV QP + P + ++C LL NMFDPA ET+P
Sbjct: 391 RAAADALLATAPQPVPQQPIMQSPPIA---------------TQCFLLSNMFDPATETNP 435
Query: 572 DFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQRAMHMRWFARRL 630
++DLEIQ DV EEC+K+G V+H+YVDK+S +G VY++ S A A A+H RWFA R+
Sbjct: 436 NWDLEIQDDVIEECNKHGGVQHVYVDKQSPSGNVYVKCPSIATAVLAVNALHGRWFAGRV 495
Query: 631 ISAIFMKPEDYEAKF 645
I A ++ +Y F
Sbjct: 496 IGAAYVPLINYYNLF 510
>gi|170058744|ref|XP_001865056.1| splicing factor [Culex quinquefasciatus]
gi|167877732|gb|EDS41115.1| splicing factor [Culex quinquefasciatus]
Length = 546
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 162/450 (36%), Positives = 226/450 (50%), Gaps = 96/450 (21%)
Query: 202 RYKEKKEV--VEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSR 259
RY++ + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVRLI ++
Sbjct: 173 RYRDGSPLEELSPE---ERDMRTVFCMQLSQRIRARDLEEFFSSVGKVRDVRLITCNKTK 229
Query: 260 RSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVS 319
R KG+ I+F DP +V +
Sbjct: 230 RFKGI---------------------AYIEF--------------------RDPESVAL- 247
Query: 320 YRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQS--NTSAGGTATGPYGAID 377
A+ LSGQ LLG P+ V+ ++AEKN + + GP
Sbjct: 248 --------------ALGLSGQRLLGIPISVQHTQAEKNRLANIPPPPPPKVIVGPM---- 289
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 437
+LYVG+LHFN+TE LR +FEPFG ++ +QL +D +TG+ KG+GF+ F + AK A
Sbjct: 290 -RLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDSDTGRSKGYGFITFHNADDAKKALE 348
Query: 438 ALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTG 497
LNG E+ GR +KV +VT+ + T S D D+ D G+ L A R LM KL
Sbjct: 349 QLNG-FELAGRPMKVGNVTERLDV--TTHASLDTDEMDRSGIDLGATGRLQLMFKL---- 401
Query: 498 IATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECL 557
+ G AV +A + + P QPA P +P I ++C
Sbjct: 402 -------AEGAGLAVPRAAADALLATAP---QPAPNQPVQDSPAI----------ATQCF 441
Query: 558 LLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAAS 616
LL NMFDPA ET+P +D+EI+ DV EEC+K+G V H+YVDK+S AG VY++ S A
Sbjct: 442 LLSNMFDPATETNPSWDVEIEDDVIEECNKHGGVLHVYVDKQSPAGNVYVKCPSIATAVL 501
Query: 617 AQRAMHMRWFARRLISAIFMKPEDYEAKFK 646
A A+H RWFA R+I+A ++ +Y F+
Sbjct: 502 AVNALHGRWFAGRVIAAAYVPLVNYHTLFQ 531
>gi|195050249|ref|XP_001992854.1| GH13506 [Drosophila grimshawi]
gi|193899913|gb|EDV98779.1| GH13506 [Drosophila grimshawi]
Length = 628
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 204/601 (33%), Positives = 278/601 (46%), Gaps = 109/601 (18%)
Query: 48 EEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETER 107
E+ E R GKRS R DE S R E HR RDR RG + ER
Sbjct: 115 EQREHRYNHRDGKRSSRSRDEHRPSDESSSRRASGRSESHRDHPSRDR-RGSSKTSNLER 173
Query: 108 DRERSRERREKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERE 167
R RSR+RR + + R+ + + RER R R + SRR +S S RS R
Sbjct: 174 KRSRSRDRRRRSRSRDTQRKPRISPIRERRRSHSRSRDTNSRRRTSYSPRSYGGRGRGGG 233
Query: 168 RESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQ 227
+ R + +R E+ PE ERD RTVF Q
Sbjct: 234 GGNGGGGGGGTGSGRSPPNGVGDRTPPTEL-------------SPE---ERDARTVFCIQ 277
Query: 228 MPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCV 287
+ + RD+ EFFS GKVRDVRLI ++R KG+
Sbjct: 278 LSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGI---------------------AY 316
Query: 288 IKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPV 347
I+F DP +V + A+ LSGQ LLG P+
Sbjct: 317 IEF--------------------EDPESVAL---------------ALGLSGQRLLGVPI 341
Query: 348 MVKPSEAEKNLVQSNTSA--GGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVE 405
MV+ ++AEKN +QS TGP +LYVG+LHFN+TE LR +FEPFG ++
Sbjct: 342 MVQHTQAEKNRLQSAPPPFQPKLHTGPM-----RLYVGSLHFNITEDMLRGIFEPFGKID 396
Query: 406 LVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTA 465
++QL +D ETG+ KG+GF+ + + AK A LNG E+ GR +KV +VT+ + D
Sbjct: 397 VIQLIMDNETGRSKGYGFITYHNADDAKKALEQLNG-FELAGRPMKVGNVTERL---DMN 452
Query: 466 AKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLP 525
S D D+ D G+ L A R LM KL G AV Q A +
Sbjct: 453 TSSLDTDEMDRSGIDLGATGRLQLMFKLAEGA----------------GLAVPQAAANAL 496
Query: 526 VVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC 585
+ P P P P++A ++C +L NMFDP ET+P +D E++ DV EEC
Sbjct: 497 LATAPQ-PAPMQHEQQTPSIA-------TQCFILSNMFDPRTETNPTWDTEVRDDVLEEC 548
Query: 586 SKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAK 644
+K+G V HI+VD SA G VY++ ST A A ++H RWFA R+I+A ++ +Y +
Sbjct: 549 TKHGGVLHIHVDTVSATGTVYVKCPSTATAVLAVNSLHGRWFAGRVITAAYVPLINYHSM 608
Query: 645 F 645
F
Sbjct: 609 F 609
>gi|242015973|ref|XP_002428613.1| RNA-binding region-containing protein, putative [Pediculus humanus
corporis]
gi|212513276|gb|EEB15875.1| RNA-binding region-containing protein, putative [Pediculus humanus
corporis]
Length = 593
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 189/597 (31%), Positives = 275/597 (46%), Gaps = 114/597 (19%)
Query: 65 DEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRG------RERERETERDRERSRERREK 118
D D R RDR RD E+ + RDRD+ ++DR SRER
Sbjct: 5 DADVLFFCRSKRDRSHSRDHEKRSK---RDRDKHDKRSRNSRSRHSRDKDRHSSRER--- 58
Query: 119 EKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELEL 178
+++R RE RDR RER+R+ R R + + R R RER+R S
Sbjct: 59 DRDRHSRE-RDRHSSRERDRNRHSRDRDRYSKDRDRRSRDRDRHSRERDRYSRERDRYRS 117
Query: 179 ERERERERELRERERDLEMRESRRYKEKKEV---------VEPEADPERDQRTVFAYQMP 229
R L + E + +K + PE ERDQRTVF Q+
Sbjct: 118 RRRSISPNNLAPHLLNNEYAYKKYASYRKSPTFSKLPIDDLTPE---ERDQRTVFCMQLS 174
Query: 230 LKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIK 289
+ RD+ EFFS GKVRDV+LI +RR KG+ ++
Sbjct: 175 QRIRGRDLEEFFSSVGKVRDVKLITCNKTRRFKGIA---------------------YVE 213
Query: 290 FFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMV 349
F V + L G + ++ +P++ V
Sbjct: 214 FKDPESVPLAMGLTGQK---------------------LLGIPIS--------------V 238
Query: 350 KPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQL 409
+P++AEKN ++T+ + G + +LYVG+LHFN+TE LR +FEPFG ++ +QL
Sbjct: 239 QPTQAEKNRQGNSTAPMMMPSDMRGPM--RLYVGSLHFNITEDMLRGIFEPFGKIDSIQL 296
Query: 410 PLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSA 469
+D ETG+ KG+GF+ F + AK A LNG E+ GR +KV +V + T + A S
Sbjct: 297 IMDPETGRSKGYGFITFHSADDAKKALEQLNG-FELAGRPMKVGNVQER--TDNIAGTSI 353
Query: 470 -DFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVG 528
D D+ D G+ L A R LM KL A G+ + A +LP
Sbjct: 354 LDTDELDRSGIDLGATGRLQLMYKL---------AEGTGMQIPPAAATALNLANALPQAV 404
Query: 529 QPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKY 588
QPA P+ ++C +L NMFDPA ET+P +D+EI+ DV EEC+K+
Sbjct: 405 QPAPPI------------------ATQCFMLANMFDPATETNPTWDVEIRDDVIEECNKH 446
Query: 589 GRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
G V H+YVDK S G VY++ + A ++ ++H RWFA R+I+A ++ +Y + F
Sbjct: 447 GGVLHVYVDKTSNGNVYVKCPTIATAVASVNSLHGRWFAGRIITAAYVPLLNYHSHF 503
>gi|270007747|gb|EFA04195.1| hypothetical protein TcasGA2_TC014444 [Tribolium castaneum]
Length = 522
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 156/432 (36%), Positives = 219/432 (50%), Gaps = 88/432 (20%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNT 276
ERD RTVF Q+ + RD+ EFFS GKVRDVRLI+ +RR KG+
Sbjct: 160 ERDARTVFVMQLSQRIRARDLEEFFSSVGKVRDVRLIVCNKTRRFKGIA----------- 208
Query: 277 LHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIA 336
I+F DP +V ++ +
Sbjct: 209 ----------YIEF--------------------KDPESVTLA---------------LG 223
Query: 337 LSGQLLLGQPVMVKPSEAEKNLVQSNTS--AGGTATGPYGAIDRKLYVGNLHFNMTETQL 394
LSGQ LLG P++V+ ++AEKN + ++ TGP +LYVG+LHFN+TE L
Sbjct: 224 LSGQKLLGVPIIVQHTQAEKNRMGNSMPNLMPKNMTGPM-----RLYVGSLHFNITEDML 278
Query: 395 RKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSS 454
R +FEPFG ++ +QL +D ETG+ KG+GF+ F E AK A LNG E+ GR +KV +
Sbjct: 279 RSIFEPFGKIDNIQLIMDPETGRSKGYGFIAFRNCEDAKKALEQLNG-FELAGRPMKVGN 337
Query: 455 VTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNG 514
VT+ + Q D D+ D G+ L A R LM KL G V
Sbjct: 338 VTERLDLQQQGPSILDSDELDRSGIDLGATGRLQLMFKLAE-----------GAGMQVPQ 386
Query: 515 SAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFD 574
+A N +I+ GQP VP V P +A ++C +L NMFDPA E+ +D
Sbjct: 387 AAANALSIA---TGQPV--VPQVQTNSTPPIA-------TQCFMLSNMFDPATESTQTWD 434
Query: 575 LEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
+EI+ DV EEC+K+G V H+YVDK S G VY++ S A ++ ++H RWFA R+I+A
Sbjct: 435 VEIRDDVIEECNKHGGVLHVYVDKGSPQGNVYVKCPSIATAVASVNSLHGRWFAGRVITA 494
Query: 634 IFMKPEDYEAKF 645
++ +Y + F
Sbjct: 495 AYVPLLNYHSLF 506
>gi|209155056|gb|ACI33760.1| RNA-binding protein 39 [Salmo salar]
Length = 535
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 158/441 (35%), Positives = 219/441 (49%), Gaps = 84/441 (19%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNT 276
ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 152 ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRMISDRNSRRSKGI------------ 199
Query: 277 LHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIA 336
I+F V + L
Sbjct: 200 ---------AYIEFLEANSVPLAIGL---------------------------------- 216
Query: 337 LSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQL 394
+GQ LLG P++V+ S+AEKN +N G A GP +LYVG+LHFN+TE L
Sbjct: 217 -TGQRLLGVPIIVQASQAEKNRAAAMANNLQKGNA-GPM-----RLYVGSLHFNITEDML 269
Query: 395 RKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSS 454
R +FEPFG +E +QL +D ET + KG+GF+ FA E AK A LNG E+ GR +KV +
Sbjct: 270 RGIFEPFGRIESIQLMMDSETARSKGYGFISFADAECAKKALEQLNG-FELAGRPMKVGN 328
Query: 455 VTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGI--------ATSIAGS 505
VT+ + TA+ D D+ + G+ L R LM +L + TG+ A ++GS
Sbjct: 329 VTERTDS-STASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGS 387
Query: 506 LGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDP 565
+ + G+ AI+ P + A+ P P + CL L NMF P
Sbjct: 388 MHSSSIHFGNMAAGTAIANPALNLGPSMNQAMNLPTQP--------LATHCLQLSNMFSP 439
Query: 566 AMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMR 624
E +P +D+EIQ DV EEC+K+G + HIYVDK S G VY++ + A +A A+H R
Sbjct: 440 QSENEPGWDIEIQDDVMEECNKHGGIVHIYVDKNSPQGNVYVKCPTIPTAMAAVNALHGR 499
Query: 625 WFARRLISAIFMKPEDYEAKF 645
WFA ++I+A ++ Y F
Sbjct: 500 WFAGKMITAAYVPLPTYHNLF 520
>gi|215820612|ref|NP_001135965.1| RNA binding motif protein 39 [Acyrthosiphon pisum]
Length = 501
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 169/514 (32%), Positives = 241/514 (46%), Gaps = 95/514 (18%)
Query: 143 RSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELRERERDLEMRESRR 202
R SRS+ R+S S+ R R + +R R R + + R
Sbjct: 55 RKHSRSKDDRKHRRKSRSKDRHRSRSRDRHSRRRTSKDKRSRTRSPIKLPKYGPPLPPPR 114
Query: 203 YKEKKEVVEPEADP-------ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
Y K + + P ERD RTVF Q+ RD+ EFFS GKVRDVR+I
Sbjct: 115 YGRKPSPLASKVPPASMLTPEERDARTVFCMQLSKTIRARDLEEFFSSVGKVRDVRMITC 174
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
+RR KG+ I+F DP +
Sbjct: 175 NKTRRFKGIA---------------------YIEF--------------------KDPES 193
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGA 375
V P+A+ L+GQ LLG P++V+P++AEKN + +N+ YG
Sbjct: 194 V---------------PLAMGLNGQKLLGVPIVVQPTQAEKNRM-ANSMPNMVQRTHYGP 237
Query: 376 IDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAA 435
+ KLYVG+LH+N+TE LR +FEPFG V+ +QL +D ETG+ KG+GF+ + E AK A
Sbjct: 238 M--KLYVGSLHYNITEEMLRGIFEPFGHVDNIQLMMDTETGRSKGYGFLTYRNAEDAKKA 295
Query: 436 QSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDR 495
LNG EI GR +KV VT++ D A + D+ D G L A R LM KL
Sbjct: 296 LEHLNG-FEIAGRPMKVGHVTENHSVYDKTA--FEVDELDRAGYDLGATGRLQLMYKLAE 352
Query: 496 TGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSE 555
G + +A N ++ V PA P VT P+ ++
Sbjct: 353 -----------GTGFPIPQAAANALQVASGVQAAPAAPTVQVTPPIA-----------TQ 390
Query: 556 CLLLKNMFDPA---METDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFEST 611
C LL NMFDP ++++ ++ EI+ DV EEC+K+G V H+YVDK S G VY++ +
Sbjct: 391 CFLLANMFDPNKEDVDSNTTWETEIRDDVIEECNKHGGVLHVYVDKASPQGNVYVKCTTI 450
Query: 612 EAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
E A ++ A+H RWF R+I+A ++ +Y F
Sbjct: 451 ETALASVAALHGRWFGGRVITAAYVPVTNYHNLF 484
>gi|170071297|ref|XP_001869868.1| splicing factor [Culex quinquefasciatus]
gi|167867202|gb|EDS30585.1| splicing factor [Culex quinquefasciatus]
Length = 524
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 158/433 (36%), Positives = 218/433 (50%), Gaps = 91/433 (21%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNT 276
ERD RTVF Q+ + RD+ EFFS GKVRDVRLI ++R KG+
Sbjct: 165 ERDMRTVFCMQLSQRIRARDLEEFFSSVGKVRDVRLITCNKTKRFKGI------------ 212
Query: 277 LHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIA 336
I+F DP +V + A+
Sbjct: 213 ---------AYIEF--------------------RDPESVAL---------------ALG 228
Query: 337 LSGQLLLGQPVMVKPSEAEKNLVQS--NTSAGGTATGPYGAIDRKLYVGNLHFNMTETQL 394
LSGQ LLG P+ V+ ++AEKN + + GP +LYVG+LHFN+TE L
Sbjct: 229 LSGQRLLGIPISVQHTQAEKNRLANIPPPPPPKVIVGPM-----RLYVGSLHFNITEDML 283
Query: 395 RKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSS 454
R +FEPFG ++ +QL +D +TG+ KG+GF+ F + AK A LNG E+ GR +KV +
Sbjct: 284 RGIFEPFGKIDNIQLIMDSDTGRSKGYGFITFHNADDAKKALEQLNG-FELAGRPMKVGN 342
Query: 455 VTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNG 514
VT+ + T S D D+ D G+ L A R LM KL + G AV
Sbjct: 343 VTERLDV--TTHASLDTDEMDRSGIDLGATGRLQLMFKL-----------AEGAGLAVPR 389
Query: 515 SAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFD 574
+A + + P QPA P +P I ++C LL NMFDPA ET+P +D
Sbjct: 390 AAADALLATAP---QPAPNQPVQDSPAI----------ATQCFLLSNMFDPATETNPSWD 436
Query: 575 LEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
+EI+ DV EEC+K+G V H+YVDK+S AG VY++ S A A A+H RWFA R+I+A
Sbjct: 437 VEIEDDVIEECNKHGGVLHVYVDKQSPAGNVYVKCPSIATAVLAVNALHGRWFAGRVIAA 496
Query: 634 IFMKPEDYEAKFK 646
++ +Y F+
Sbjct: 497 AYVPLVNYHTLFQ 509
>gi|312374824|gb|EFR22303.1| hypothetical protein AND_15459 [Anopheles darlingi]
Length = 560
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 191/589 (32%), Positives = 272/589 (46%), Gaps = 121/589 (20%)
Query: 72 SRRDRDRDRD-------RDKERHR----RDRDRDRDRGRERERETERD--RERSRERREK 118
S RD++RDRD +DK+R R RD++R++DR + +ER R RERS++ +EK
Sbjct: 62 SDRDKERDRDGGEGRSRKDKDRSRSPRPRDKEREKDRRKSKERSKSRSPRRERSKDHKEK 121
Query: 119 EKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELEL 178
+ + R EK R RER G RR S + R+ R
Sbjct: 122 DHRSKNDHHRSVEKRRSRERGG---GMIDHRRKSRERDHRRRSRSRDAGRRRRSMSPRHY 178
Query: 179 ERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVY 238
R R R+R E+ + +RD RTVF Q+ + RD+
Sbjct: 179 RRGRGGYGSYRDRTPGDEVSQE----------------DRDARTVFCMQLSQRIRARDLE 222
Query: 239 EFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGM 298
EFFS GKVRDVRLI ++R KG+ I+F
Sbjct: 223 EFFSSVGKVRDVRLITCNKTKRFKGI---------------------AYIEF-------- 253
Query: 299 VFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNL 358
DP +V +A+ LSGQ LLG P+ V+ ++AEKN
Sbjct: 254 ------------KDPESVA---------------LALGLSGQRLLGIPISVQHTQAEKNR 286
Query: 359 VQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQC 418
+ + A +LYVG+LHFN+TE LR +FEPFG ++ +QL +D +TG+
Sbjct: 287 MANQPPPAPPKN---PAGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDTDTGRS 343
Query: 419 KGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGG 478
KG+GF+ F + AK A LNG E+ GR +KV +VT+ + T S D D+ D G
Sbjct: 344 KGYGFITFHNADDAKKALEQLNG-FELAGRPMKVGNVTERLDV--TTHASLDTDEMDRSG 400
Query: 479 LALNAQSRALLMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAV 537
+ L A R LM KL + G+A A + + Q P +
Sbjct: 401 IELGATGRLQLMFKLAEGAGLAVPRAAADALLATAPQPIPQQPLQQSPPIA--------- 451
Query: 538 TAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVD 597
++C LL NMFDP+ ET+P++D+EIQ DV EEC+K+G V H+YVD
Sbjct: 452 ----------------TQCFLLSNMFDPSTETNPNWDVEIQDDVIEECNKHGGVLHVYVD 495
Query: 598 KRS-AGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
K S +G VY++ + A A A+H RWFA R+I A ++ +Y F
Sbjct: 496 KLSPSGNVYVKCPNVATAVLAVNALHGRWFAGRVIGAAYVPLVNYYNLF 544
>gi|326931688|ref|XP_003211958.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like
[Meleagris gallopavo]
Length = 571
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 167/450 (37%), Positives = 226/450 (50%), Gaps = 83/450 (18%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 182 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 241
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 242 SKGIA---------------------YVEFVDVSSV------------------------ 256
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
P+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 257 -----------PLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 299
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 300 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 359
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKLDRT 496
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L
Sbjct: 360 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAE- 414
Query: 497 GIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSEC 556
G I + A ++GS L V A A V P ++C
Sbjct: 415 GTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQNEVLAAAASVQP--------LATQC 466
Query: 557 LLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAA 615
L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S AA
Sbjct: 467 FQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAI 526
Query: 616 SAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+A A+H RWFA ++I+A ++ Y + F
Sbjct: 527 AAVNALHGRWFAGKMITAAYVPLPTYHSLF 556
>gi|224077247|ref|XP_002192236.1| PREDICTED: RNA-binding protein 39 [Taeniopygia guttata]
Length = 522
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 167/450 (37%), Positives = 226/450 (50%), Gaps = 83/450 (18%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 193 SKGI---------------------AYVEFVDVSSV------------------------ 207
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
P+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 208 -----------PLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 250
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 251 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 310
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKLDRT 496
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L
Sbjct: 311 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAE- 365
Query: 497 GIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSEC 556
G I + A ++GS L V A A V P ++C
Sbjct: 366 GTGLQIPPAAQQALQMSGSLAFGAVTDLQTRLSQQNEVLAAAASVQP--------LATQC 417
Query: 557 LLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAA 615
L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S AA
Sbjct: 418 FQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAI 477
Query: 616 SAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+A A+H RWFA ++I+A ++ Y + F
Sbjct: 478 AAVNALHGRWFAGKMITAAYVPLPTYHSLF 507
>gi|118100450|ref|XP_425690.2| PREDICTED: RNA-binding protein 39 [Gallus gallus]
gi|363741409|ref|XP_003642487.1| PREDICTED: RNA-binding protein 39-like [Gallus gallus]
Length = 522
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 167/450 (37%), Positives = 226/450 (50%), Gaps = 83/450 (18%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 193 SKGI---------------------AYVEFVDVSSV------------------------ 207
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
P+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 208 -----------PLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 250
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 251 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 310
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKLDRT 496
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L
Sbjct: 311 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAE- 365
Query: 497 GIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSEC 556
G I + A ++GS L V A A V P ++C
Sbjct: 366 GTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQNEVLAAAASVQP--------LATQC 417
Query: 557 LLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAA 615
L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S AA
Sbjct: 418 FQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAI 477
Query: 616 SAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+A A+H RWFA ++I+A ++ Y + F
Sbjct: 478 AAVNALHGRWFAGKMITAAYVPLPTYHSLF 507
>gi|126291195|ref|XP_001371651.1| PREDICTED: RNA-binding protein 39 isoform 1 [Monodelphis domestica]
Length = 524
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 172/459 (37%), Positives = 232/459 (50%), Gaps = 99/459 (21%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 193 SKGI---------------------AYVEFVDVSSV------------------------ 207
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
P+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 208 -----------PLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 250
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 251 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 310
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 311 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 366
Query: 496 TGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAA 547
TG+ A ++GSL A A Q +S Q V A A V P
Sbjct: 367 TGLQIPPAAQQALQMSGSL----AFGAVADLQTRLS----QQSEVTALAAAASVQP---- 414
Query: 548 EFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYL 606
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY+
Sbjct: 415 ----LATQCFQLSNMFNPQTEDELGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYV 470
Query: 607 RFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 471 KCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 509
>gi|327271618|ref|XP_003220584.1| PREDICTED: RNA-binding protein 39-like [Anolis carolinensis]
Length = 578
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 169/460 (36%), Positives = 234/460 (50%), Gaps = 103/460 (22%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 189 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 248
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 249 SKGIA---------------------YVEFVDVSSV------------------------ 263
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
P+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 264 -----------PLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 306
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 307 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 366
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 367 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 422
Query: 496 TGI--------ATSIAGSLGVAPAVN-GSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMA 546
TG+ A ++GSL + + + ++QQ+ L A A V P
Sbjct: 423 TGLQIPPAAQQALQMSGSLAFSAVADLQTRLSQQSEVL-----------AAAASVQPLA- 470
Query: 547 AEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVY 605
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY
Sbjct: 471 -------TQCFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVVHIYVDKNSAQGNVY 523
Query: 606 LRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 524 VKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 563
>gi|395505312|ref|XP_003756986.1| PREDICTED: RNA-binding protein 39 [Sarcophilus harrisii]
Length = 557
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 172/459 (37%), Positives = 232/459 (50%), Gaps = 99/459 (21%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 166 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 225
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 226 SKGIA---------------------YVEFVDVSSV------------------------ 240
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
P+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 241 -----------PLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 283
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 284 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 343
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 344 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 399
Query: 496 TGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAA 547
TG+ A ++GSL A A Q +S Q V A A V P
Sbjct: 400 TGLQIPPAAQQALQMSGSL----AFGAVADLQTRLS----QQSEVTALAAAASVQP---- 447
Query: 548 EFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYL 606
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY+
Sbjct: 448 ----LATQCFQLSNMFNPQTEDELGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYV 503
Query: 607 RFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 504 KCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 542
>gi|189237575|ref|XP_974855.2| PREDICTED: similar to splicing factor [Tribolium castaneum]
Length = 501
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 163/464 (35%), Positives = 231/464 (49%), Gaps = 96/464 (20%)
Query: 186 RELRERERD-LEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKA 244
+ R R L +R + +E + PE ERD RTVF Q+ + RD+ EFFS
Sbjct: 114 KPFGRRNRSPLGLRSNSPVEE----LSPE---ERDARTVFVMQLSQRIRARDLEEFFSSV 166
Query: 245 GKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLG 304
GKVRDVRLI+ +RR KG+ I+F
Sbjct: 167 GKVRDVRLIVCNKTRRFKGIA---------------------YIEF-------------- 191
Query: 305 DETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTS 364
DP +V ++ + LSGQ LLG P++V+ ++AEKN + ++
Sbjct: 192 ------KDPESVTLA---------------LGLSGQKLLGVPIIVQHTQAEKNRMGNSMP 230
Query: 365 --AGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFG 422
TGP +LYVG+LHFN+TE LR +FEPFG ++ +QL +D ETG+ KG+G
Sbjct: 231 NLMPKNMTGPM-----RLYVGSLHFNITEDMLRSIFEPFGKIDNIQLIMDPETGRSKGYG 285
Query: 423 FVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALN 482
F+ F E AK A LNG E+ GR +KV +VT+ + Q D D+ D G+ L
Sbjct: 286 FIAFRNCEDAKKALEQLNG-FELAGRPMKVGNVTERLDLQQQGPSILDSDELDRSGIDLG 344
Query: 483 AQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVI 542
A R LM KL G V +A N +I+ GQP VP V
Sbjct: 345 ATGRLQLMFKLAE-----------GAGMQVPQAAANALSIA---TGQPV--VPQVQTNST 388
Query: 543 PNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA- 601
P +A ++C +L NMFDPA E+ +D+EI+ DV EEC+K+G V H+YVDK S
Sbjct: 389 PPIA-------TQCFMLSNMFDPATESTQTWDVEIRDDVIEECNKHGGVLHVYVDKGSPQ 441
Query: 602 GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
G VY++ S A ++ ++H RWFA R+I+A ++ +Y + F
Sbjct: 442 GNVYVKCPSIATAVASVNSLHGRWFAGRVITAAYVPLLNYHSLF 485
>gi|126291198|ref|XP_001371677.1| PREDICTED: RNA-binding protein 39 isoform 2 [Monodelphis domestica]
Length = 533
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 172/461 (37%), Positives = 232/461 (50%), Gaps = 94/461 (20%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 193 SKGI---------------------AYVEFVDVSSV------------------------ 207
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
P+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 208 -----------PLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 250
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 251 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 310
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 311 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 366
Query: 496 TGI--------ATSIAGSLGVAPAVNGSAVNQQAISLP--VVGQPAVPVPAVTAPVIPNM 545
TG+ A ++GSL AV I L + Q V A A V P
Sbjct: 367 TGLQIPPAAQQALQMSGSLAFG-AVAAKIFFPFFIDLQTRLSQQSEVTALAAAASVQP-- 423
Query: 546 AAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFV 604
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G V
Sbjct: 424 ------LATQCFQLSNMFNPQTEDELGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNV 477
Query: 605 YLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
Y++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 478 YVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 518
>gi|195338839|ref|XP_002036031.1| GM16278 [Drosophila sechellia]
gi|194129911|gb|EDW51954.1| GM16278 [Drosophila sechellia]
Length = 596
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 136/327 (41%), Positives = 187/327 (57%), Gaps = 36/327 (11%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA--GGTATGPYGAIDRK 379
YIEF D SV +A+ LSGQ LLG P+MV+ ++AEKN +Q+ T A + TGP +
Sbjct: 284 YIEFDDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNATPAFQPKSHTGPM-----R 338
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG ++ +QL +D ETG+ KG+GF+ + + AK A L
Sbjct: 339 LYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQL 398
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIA 499
NG E+ GR +KV +VT+ + D S D D+ D G+ L A R LM KL
Sbjct: 399 NG-FELAGRLMKVGNVTERL---DMNTTSLDTDEMDRTGIDLGATGRLQLMFKLAEGA-- 452
Query: 500 TSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLL 559
G AV Q A + + P P P V P++A ++C +L
Sbjct: 453 --------------GLAVPQAAANALLATAPQ-PAPLQQQEVAPSIA-------TQCFIL 490
Query: 560 KNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQ 618
NMFDP ET+P +D+EI+ DV EEC+K+G V HI+VD S G VY++ ST A A
Sbjct: 491 SNMFDPRTETNPTWDVEIRDDVLEECAKHGGVLHIHVDTISHTGTVYVKCPSTTTAVLAV 550
Query: 619 RAMHMRWFARRLISAIFMKPEDYEAKF 645
A+H RWFA R+I+A ++ +Y F
Sbjct: 551 NALHGRWFAGRVITAAYLPVINYHTMF 577
>gi|198476543|ref|XP_001357388.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
gi|198137744|gb|EAL34457.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
Length = 625
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 153/432 (35%), Positives = 213/432 (49%), Gaps = 92/432 (21%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNT 276
ERD RTVF Q+ + RD+ EFFS GKVRDVRLI ++R KG+
Sbjct: 263 ERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGI------------ 310
Query: 277 LHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIA 336
I+F DP +V + A+
Sbjct: 311 ---------AYIEF--------------------EDPESVAL---------------ALG 326
Query: 337 LSGQLLLGQPVMVKPSEAEKNLVQSNTSA--GGTATGPYGAIDRKLYVGNLHFNMTETQL 394
LSGQ LLG P+MV+ ++AEKN +Q+ T A + GP +LYVG+LHF++TE L
Sbjct: 327 LSGQRLLGVPIMVQHTQAEKNRLQNATPAFQPKSHVGPM-----RLYVGSLHFDITEEML 381
Query: 395 RKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSS 454
R +FEPFG ++ +QL +D ET + KG+GF+ + E AK A LNG E+ GR +KV +
Sbjct: 382 RGIFEPFGKIDAIQLIMDTETNRSKGYGFITYHNAEDAKKALEQLNG-FELAGRPMKVGN 440
Query: 455 VTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNG 514
VT+ + D S D D+ D G+ L A R LM KL A G+A
Sbjct: 441 VTERL---DMNTTSLDTDEMDRTGIDLGATGRLQLMFKL---------AEGAGLAVPQAA 488
Query: 515 SAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFD 574
+ P Q P++ ++C +L NMFDP ET+P +D
Sbjct: 489 ANALLATAPQPAPVQQQQATPSIA---------------TQCFILSNMFDPRTETNPTWD 533
Query: 575 LEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
+EI+ DV EEC+K+G V HI+VD S G VY++ ST A A A+H RWFA R+I+A
Sbjct: 534 VEIRDDVLEECAKHGGVLHIHVDTASPTGTVYVKCPSTTTAVLAVNALHGRWFAGRVITA 593
Query: 634 IFMKPEDYEAKF 645
++ +Y + F
Sbjct: 594 AYVPVVNYHSMF 605
>gi|195577213|ref|XP_002078467.1| GD23448 [Drosophila simulans]
gi|194190476|gb|EDX04052.1| GD23448 [Drosophila simulans]
Length = 608
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 136/327 (41%), Positives = 187/327 (57%), Gaps = 36/327 (11%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA--GGTATGPYGAIDRK 379
YIEF D SV +A+ LSGQ LLG P+MV+ ++AEKN +Q+ T A + TGP +
Sbjct: 296 YIEFDDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNATPAFQPKSHTGPM-----R 350
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG ++ +QL +D ETG+ KG+GF+ + + AK A L
Sbjct: 351 LYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQL 410
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIA 499
NG E+ GR +KV +VT+ + D S D D+ D G+ L A R LM KL
Sbjct: 411 NG-FELAGRLMKVGNVTERL---DMNTTSLDTDEMDRTGIDLGATGRLQLMFKLAEGA-- 464
Query: 500 TSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLL 559
G AV Q A + + P P P V P++A ++C +L
Sbjct: 465 --------------GLAVPQAAANALLATAPQ-PAPLQQQEVAPSIA-------TQCFIL 502
Query: 560 KNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQ 618
NMFDP ET+P +D+EI+ DV EEC+K+G V HI+VD S G VY++ ST A A
Sbjct: 503 SNMFDPRTETNPTWDVEIRDDVLEECAKHGGVLHIHVDTISHTGTVYVKCPSTTTAVLAV 562
Query: 619 RAMHMRWFARRLISAIFMKPEDYEAKF 645
A+H RWFA R+I+A ++ +Y F
Sbjct: 563 NALHGRWFAGRVITAAYLPVINYHTMF 589
>gi|426241406|ref|XP_004014582.1| PREDICTED: RNA-binding protein 39 isoform 3 [Ovis aries]
Length = 502
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 165/451 (36%), Positives = 227/451 (50%), Gaps = 83/451 (18%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 111 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 170
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 171 SKGIA---------------------YVEFVDVSSV------------------------ 185
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
P+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 186 -----------PLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 228
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 229 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 288
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 289 LNG-FELTGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 344
Query: 496 TGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSE 555
TG L + PA + +++ V + T AA ++
Sbjct: 345 TG--------LQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLATQ 396
Query: 556 CLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAA 614
C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S AA
Sbjct: 397 CFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAA 456
Query: 615 ASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+A A+H RWFA ++I+A ++ Y F
Sbjct: 457 IAAVNALHGRWFAGKMITAAYVPLPTYHNLF 487
>gi|194386804|dbj|BAG61212.1| unnamed protein product [Homo sapiens]
Length = 502
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 165/451 (36%), Positives = 227/451 (50%), Gaps = 83/451 (18%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 111 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 170
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 171 SKGIA---------------------YVEFVDVSSV------------------------ 185
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
P+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 186 -----------PLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 228
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 229 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 288
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 289 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 344
Query: 496 TGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSE 555
TG L + PA + +++ V + T AA ++
Sbjct: 345 TG--------LQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLATQ 396
Query: 556 CLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAA 614
C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S AA
Sbjct: 397 CFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAA 456
Query: 615 ASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+A A+H RWFA ++I+A ++ Y F
Sbjct: 457 IAAVNALHGRWFAGKMITAAYVPLPTYHNLF 487
>gi|336176066|ref|NP_001229529.1| RNA-binding protein 39 isoform d [Homo sapiens]
gi|73991836|ref|XP_865202.1| PREDICTED: RNA-binding protein 39 isoform 16 [Canis lupus
familiaris]
gi|296199705|ref|XP_002747280.1| PREDICTED: RNA-binding protein 39 isoform 3 [Callithrix jacchus]
gi|332858230|ref|XP_003316933.1| PREDICTED: uncharacterized protein LOC458443 isoform 3 [Pan
troglodytes]
gi|335304749|ref|XP_003360015.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719245|ref|XP_003363967.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|426391513|ref|XP_004062117.1| PREDICTED: RNA-binding protein 39 isoform 4 [Gorilla gorilla
gorilla]
Length = 502
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 165/451 (36%), Positives = 227/451 (50%), Gaps = 83/451 (18%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 111 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 170
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 171 SKGIA---------------------YVEFVDVSSV------------------------ 185
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
P+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 186 -----------PLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 228
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 229 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 288
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 289 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 344
Query: 496 TGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSE 555
TG L + PA + +++ V + T AA ++
Sbjct: 345 TG--------LQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLATQ 396
Query: 556 CLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAA 614
C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S AA
Sbjct: 397 CFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAA 456
Query: 615 ASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+A A+H RWFA ++I+A ++ Y F
Sbjct: 457 IAAVNALHGRWFAGKMITAAYVPLPTYHNLF 487
>gi|431894348|gb|ELK04148.1| RNA-binding protein 39 [Pteropus alecto]
Length = 601
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 165/451 (36%), Positives = 227/451 (50%), Gaps = 83/451 (18%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 210 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 269
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 270 SKGIA---------------------YVEFVDVSSV------------------------ 284
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
P+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 285 -----------PLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 327
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 328 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 387
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 388 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 443
Query: 496 TGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSE 555
TG L + PA + +++ V + T AA ++
Sbjct: 444 TG--------LQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLATQ 495
Query: 556 CLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAA 614
C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S AA
Sbjct: 496 CFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAA 555
Query: 615 ASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+A A+H RWFA ++I+A ++ Y F
Sbjct: 556 IAAVNALHGRWFAGKMITAAYVPLPTYHNLF 586
>gi|426241408|ref|XP_004014583.1| PREDICTED: RNA-binding protein 39 isoform 4 [Ovis aries]
Length = 508
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 169/460 (36%), Positives = 231/460 (50%), Gaps = 95/460 (20%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 111 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 170
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 171 SKGIA---------------------YVEFVDVSSV------------------------ 185
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
P+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 186 -----------PLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 228
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 229 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 288
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 289 LNG-FELTGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 344
Query: 496 TGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVIPNMA 546
TG+ A ++GSL S V I L + Q A + +A
Sbjct: 345 TGLQIPPAAQQALQMSGSLAFGAVAEFSFV----IDLQTRLSQQTEASALAAAASVQPLA 400
Query: 547 AEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVY 605
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY
Sbjct: 401 -------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVY 453
Query: 606 LRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 454 VKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 493
>gi|426241404|ref|XP_004014581.1| PREDICTED: RNA-binding protein 39 isoform 2 [Ovis aries]
Length = 524
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 165/451 (36%), Positives = 227/451 (50%), Gaps = 83/451 (18%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 193 SKGI---------------------AYVEFVDVSSV------------------------ 207
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
P+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 208 -----------PLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 250
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 251 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 310
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 311 LNG-FELTGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 366
Query: 496 TGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSE 555
TG L + PA + +++ V + T AA ++
Sbjct: 367 TG--------LQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLATQ 418
Query: 556 CLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAA 614
C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S AA
Sbjct: 419 CFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAA 478
Query: 615 ASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+A A+H RWFA ++I+A ++ Y F
Sbjct: 479 IAAVNALHGRWFAGKMITAAYVPLPTYHNLF 509
>gi|4757926|ref|NP_004893.1| RNA-binding protein 39 isoform b [Homo sapiens]
gi|197097940|ref|NP_001125339.1| RNA-binding protein 39 [Pongo abelii]
gi|149733223|ref|XP_001501876.1| PREDICTED: RNA-binding protein 39 isoform 2 [Equus caballus]
gi|194044529|ref|XP_001925282.1| PREDICTED: RNA-binding protein 39 isoform 2 [Sus scrofa]
gi|296199701|ref|XP_002747278.1| PREDICTED: RNA-binding protein 39 isoform 1 [Callithrix jacchus]
gi|301762104|ref|XP_002916459.1| PREDICTED: RNA-binding protein 39-like [Ailuropoda melanoleuca]
gi|332858226|ref|XP_514808.3| PREDICTED: uncharacterized protein LOC458443 isoform 5 [Pan
troglodytes]
gi|344279921|ref|XP_003411734.1| PREDICTED: RNA-binding protein 39 isoform 2 [Loxodonta africana]
gi|345789988|ref|XP_865124.2| PREDICTED: RNA-binding protein 39 isoform 12 [Canis lupus
familiaris]
gi|354477984|ref|XP_003501197.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Cricetulus
griseus]
gi|426391509|ref|XP_004062115.1| PREDICTED: RNA-binding protein 39 isoform 2 [Gorilla gorilla
gorilla]
gi|75070825|sp|Q5RC80.1|RBM39_PONAB RecName: Full=RNA-binding protein 39; AltName: Full=RNA-binding
motif protein 39
gi|405192|gb|AAA16346.1| splicing factor [Homo sapiens]
gi|55727753|emb|CAH90627.1| hypothetical protein [Pongo abelii]
gi|119596568|gb|EAW76162.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|119596569|gb|EAW76163.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|296480931|tpg|DAA23046.1| TPA: RNA binding motif protein 39 [Bos taurus]
gi|307686241|dbj|BAJ21051.1| RNA binding motif protein 39 [synthetic construct]
gi|344246681|gb|EGW02785.1| RNA-binding protein 39 [Cricetulus griseus]
gi|380783275|gb|AFE63513.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|383408127|gb|AFH27277.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|384939256|gb|AFI33233.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|410218748|gb|JAA06593.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255438|gb|JAA15686.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292902|gb|JAA25051.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350855|gb|JAA42031.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350863|gb|JAA42035.1| RNA binding motif protein 39 [Pan troglodytes]
Length = 524
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 165/451 (36%), Positives = 227/451 (50%), Gaps = 83/451 (18%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 193 SKGI---------------------AYVEFVDVSSV------------------------ 207
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
P+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 208 -----------PLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 250
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 251 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 310
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 311 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 366
Query: 496 TGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSE 555
TG L + PA + +++ V + T AA ++
Sbjct: 367 TG--------LQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLATQ 418
Query: 556 CLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAA 614
C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S AA
Sbjct: 419 CFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAA 478
Query: 615 ASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+A A+H RWFA ++I+A ++ Y F
Sbjct: 479 IAAVNALHGRWFAGKMITAAYVPLPTYHNLF 509
>gi|61557287|ref|NP_001013225.1| RNA-binding protein 39 [Rattus norvegicus]
gi|392346874|ref|XP_003749654.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Rattus
norvegicus]
gi|60552170|gb|AAH91394.1| RNA binding motif protein 39 [Rattus norvegicus]
gi|74196119|dbj|BAE32977.1| unnamed protein product [Mus musculus]
gi|149030834|gb|EDL85861.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Rattus
norvegicus]
Length = 524
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 165/451 (36%), Positives = 227/451 (50%), Gaps = 83/451 (18%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 193 SKGI---------------------AYVEFVDVSSV------------------------ 207
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
P+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 208 -----------PLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 250
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 251 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 310
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 311 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 366
Query: 496 TGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSE 555
TG L + PA + +++ V + T AA ++
Sbjct: 367 TG--------LQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLATQ 418
Query: 556 CLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAA 614
C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S AA
Sbjct: 419 CFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAA 478
Query: 615 ASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+A A+H RWFA ++I+A ++ Y F
Sbjct: 479 IAAVNALHGRWFAGKMITAAYVPLPTYHNLF 509
>gi|336176064|ref|NP_001229528.1| RNA-binding protein 39 isoform c [Homo sapiens]
gi|296199707|ref|XP_002747281.1| PREDICTED: RNA-binding protein 39 isoform 4 [Callithrix jacchus]
gi|332858228|ref|XP_003316932.1| PREDICTED: uncharacterized protein LOC458443 isoform 2 [Pan
troglodytes]
gi|335304745|ref|XP_003360013.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719242|ref|XP_003363966.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|345789990|ref|XP_003433300.1| PREDICTED: RNA-binding protein 39 [Canis lupus familiaris]
gi|426391511|ref|XP_004062116.1| PREDICTED: RNA-binding protein 39 isoform 3 [Gorilla gorilla
gorilla]
gi|124297482|gb|AAI31544.1| RBM39 protein [Homo sapiens]
gi|194389138|dbj|BAG61586.1| unnamed protein product [Homo sapiens]
Length = 508
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 169/460 (36%), Positives = 231/460 (50%), Gaps = 95/460 (20%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 111 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 170
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 171 SKGIA---------------------YVEFVDVSSV------------------------ 185
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
P+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 186 -----------PLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 228
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 229 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 288
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 289 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 344
Query: 496 TGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVIPNMA 546
TG+ A ++GSL S V I L + Q A + +A
Sbjct: 345 TGLQIPPAAQQALQMSGSLAFGAVAEFSFV----IDLQTRLSQQTEASALAAAASVQPLA 400
Query: 547 AEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVY 605
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY
Sbjct: 401 -------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVY 453
Query: 606 LRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 454 VKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 493
>gi|74179655|dbj|BAE22477.1| unnamed protein product [Mus musculus]
Length = 521
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 165/451 (36%), Positives = 227/451 (50%), Gaps = 83/451 (18%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 130 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 189
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 190 SKGI---------------------AYVEFVDVSSV------------------------ 204
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
P+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 205 -----------PLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 247
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 248 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 307
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 308 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 363
Query: 496 TGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSE 555
TG L + PA + +++ V + T AA ++
Sbjct: 364 TG--------LQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLATQ 415
Query: 556 CLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAA 614
C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S AA
Sbjct: 416 CFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAA 475
Query: 615 ASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+A A+H RWFA ++I+A ++ Y F
Sbjct: 476 IAAVNALHGRWFAGKMITAAYVPLPTYHNLF 506
>gi|432101442|gb|ELK29624.1| RNA-binding protein 39 [Myotis davidii]
Length = 491
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 165/451 (36%), Positives = 228/451 (50%), Gaps = 94/451 (20%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 111 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 170
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 171 SKGIA---------------------YVEFVDVSSV------------------------ 185
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
P+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 186 -----------PLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 228
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 229 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 288
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 289 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 344
Query: 496 TGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSE 555
TG L + PA + +++ V A+ A P+ ++
Sbjct: 345 TG--------LQIPPAAQQALQMSGSLAFGAVAASALAAAASVQPL-----------ATQ 385
Query: 556 CLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAA 614
C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S AA
Sbjct: 386 CFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAA 445
Query: 615 ASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+A A+H RWFA ++I+A ++ Y F
Sbjct: 446 IAAVNALHGRWFAGKMITAAYVPLPTYHNLF 476
>gi|19920866|ref|NP_609095.1| CG11266, isoform B [Drosophila melanogaster]
gi|24582412|ref|NP_723243.1| CG11266, isoform A [Drosophila melanogaster]
gi|7297213|gb|AAF52478.1| CG11266, isoform A [Drosophila melanogaster]
gi|15292031|gb|AAK93284.1| LD35730p [Drosophila melanogaster]
gi|22945834|gb|AAN10614.1| CG11266, isoform B [Drosophila melanogaster]
gi|220946034|gb|ACL85560.1| CG11266-PA [synthetic construct]
gi|220955788|gb|ACL90437.1| CG11266-PA [synthetic construct]
Length = 594
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 135/327 (41%), Positives = 186/327 (56%), Gaps = 36/327 (11%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA--GGTATGPYGAIDRK 379
YIEF D SV +A+ LSGQ LLG P+MV+ ++AEKN +Q+ A + TGP +
Sbjct: 282 YIEFDDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHTGPM-----R 336
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG ++ +QL +D ETG+ KG+GF+ + + AK A L
Sbjct: 337 LYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQL 396
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIA 499
NG E+ GR +KV +VT+ + D S D D+ D G+ L A R LM KL
Sbjct: 397 NG-FELAGRLMKVGNVTERL---DMNTTSLDTDEMDRTGIDLGATGRLQLMFKLAEGA-- 450
Query: 500 TSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLL 559
G AV Q A + + P P P V P++A ++C +L
Sbjct: 451 --------------GLAVPQAAANALLATAPQ-PAPLQQQEVAPSIA-------TQCFIL 488
Query: 560 KNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQ 618
NMFDP ET+P +D+EI+ DV EEC+K+G V HI+VD S G VY++ ST A A
Sbjct: 489 SNMFDPRTETNPTWDVEIRDDVLEECAKHGGVLHIHVDTISHTGTVYVKCPSTTTAVLAV 548
Query: 619 RAMHMRWFARRLISAIFMKPEDYEAKF 645
A+H RWFA R+I+A ++ +Y F
Sbjct: 549 NALHGRWFAGRVITAAYVPVINYHTMF 575
>gi|426241402|ref|XP_004014580.1| PREDICTED: RNA-binding protein 39 isoform 1 [Ovis aries]
Length = 530
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 169/460 (36%), Positives = 231/460 (50%), Gaps = 95/460 (20%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 193 SKGI---------------------AYVEFVDVSSV------------------------ 207
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
P+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 208 -----------PLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 250
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 251 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 310
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 311 LNG-FELTGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 366
Query: 496 TGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVIPNMA 546
TG+ A ++GSL S V I L + Q A + +A
Sbjct: 367 TGLQIPPAAQQALQMSGSLAFGAVAEFSFV----IDLQTRLSQQTEASALAAAASVQPLA 422
Query: 547 AEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVY 605
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY
Sbjct: 423 -------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVY 475
Query: 606 LRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 476 VKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 515
>gi|348503003|ref|XP_003439056.1| PREDICTED: RNA-binding protein 39-like [Oreochromis niloticus]
Length = 498
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 231/472 (48%), Gaps = 84/472 (17%)
Query: 180 RERERERELRERERDLEMRESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERD 236
R R R +R+R R S KEK + P PE RD RTVF Q+ + RD
Sbjct: 90 RYRARRSPIRKRSRS----RSPFKKEKSPIRAPIDNLTPEERDARTVFCMQLAARIRARD 145
Query: 237 VYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEV 296
+ +FFS GKVRDVR+I DRNSRRSKG+ I+F + V
Sbjct: 146 LEDFFSAVGKVRDVRIISDRNSRRSKGI---------------------AYIEFVESSSV 184
Query: 297 GMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEK 356
+ L G Q LLG P++V+ S+AEK
Sbjct: 185 PLAIGLTG-----------------------------------QRLLGVPIIVQASQAEK 209
Query: 357 N-LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIET 415
N + + ++GP +LYVG+LHFN+TE LR +FEPFG +E +QL +D ET
Sbjct: 210 NRAAAAANNLQKGSSGPM-----RLYVGSLHFNITEEMLRGIFEPFGKIEGIQLMMDSET 264
Query: 416 GQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDD 475
G+ KG+GF+ FA E AK A LNG E+ GR +KV VT+ TA+ D D+ +
Sbjct: 265 GRSKGYGFISFADAECAKKALEQLNG-FELAGRPMKVGHVTER-SDSSTASSFLDNDELE 322
Query: 476 GGGLALNAQSRALLMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPV 534
G+ L R LM +L + TG L + PA + +I +G PA
Sbjct: 323 RTGIDLGTTGRLQLMARLAEGTG--------LKIPPAAQQALQMTGSIPFGGIGAPAAVP 374
Query: 535 PAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHI 594
+ + N+ ++ + + CL L N+F+P E DP + EIQ DV EEC+K+G + HI
Sbjct: 375 TPAPSQAL-NLPSQPLA--THCLQLSNLFNPQAENDPSWAAEIQDDVIEECNKHGGIVHI 431
Query: 595 YVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
YVDK S G VY++ S AA + A+H RWFA ++I+A ++ Y F
Sbjct: 432 YVDKNSPQGNVYVKCPSIPAAMATVNALHGRWFAGKMITAAYVPLPTYHNLF 483
>gi|118403314|ref|NP_573505.2| RNA-binding protein 39 [Mus musculus]
gi|392346872|ref|XP_003749653.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Rattus
norvegicus]
gi|341941811|sp|Q8VH51.2|RBM39_MOUSE RecName: Full=RNA-binding protein 39; AltName: Full=Coactivator of
activating protein 1 and estrogen receptors;
Short=Coactivator of AP-1 and ERs; AltName:
Full=RNA-binding motif protein 39; AltName:
Full=RNA-binding region-containing protein 2; AltName:
Full=Transcription coactivator CAPER
gi|55991480|gb|AAH86645.1| RNA binding motif protein 39 [Mus musculus]
gi|74151058|dbj|BAE27657.1| unnamed protein product [Mus musculus]
gi|148674237|gb|EDL06184.1| RNA binding motif protein 39, isoform CRA_b [Mus musculus]
Length = 530
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 169/460 (36%), Positives = 231/460 (50%), Gaps = 95/460 (20%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 193 SKGI---------------------AYVEFVDVSSV------------------------ 207
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
P+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 208 -----------PLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 250
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 251 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 310
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 311 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 366
Query: 496 TGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVIPNMA 546
TG+ A ++GSL S V I L + Q A + +A
Sbjct: 367 TGLQIPPAAQQALQMSGSLAFGAVAEFSFV----IDLQTRLSQQTEASALAAAASVQPLA 422
Query: 547 AEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVY 605
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY
Sbjct: 423 -------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVY 475
Query: 606 LRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 476 VKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 515
>gi|35493811|ref|NP_909122.1| RNA-binding protein 39 isoform a [Homo sapiens]
gi|281182530|ref|NP_001162566.1| RNA-binding protein 39 [Papio anubis]
gi|284004921|ref|NP_001164806.1| RNA-binding protein 39 [Oryctolagus cuniculus]
gi|149733225|ref|XP_001501869.1| PREDICTED: RNA-binding protein 39 isoform 1 [Equus caballus]
gi|296199703|ref|XP_002747279.1| PREDICTED: RNA-binding protein 39 isoform 2 [Callithrix jacchus]
gi|332858224|ref|XP_003316931.1| PREDICTED: uncharacterized protein LOC458443 isoform 1 [Pan
troglodytes]
gi|335304742|ref|XP_003360012.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|344279919|ref|XP_003411733.1| PREDICTED: RNA-binding protein 39 isoform 1 [Loxodonta africana]
gi|345789986|ref|XP_864959.2| PREDICTED: RNA-binding protein 39 isoform 3 [Canis lupus
familiaris]
gi|354477982|ref|XP_003501196.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Cricetulus
griseus]
gi|397523808|ref|XP_003831910.1| PREDICTED: RNA-binding protein 39 [Pan paniscus]
gi|426391507|ref|XP_004062114.1| PREDICTED: RNA-binding protein 39 isoform 1 [Gorilla gorilla
gorilla]
gi|28201880|sp|Q14498.2|RBM39_HUMAN RecName: Full=RNA-binding protein 39; AltName: Full=Hepatocellular
carcinoma protein 1; AltName: Full=RNA-binding motif
protein 39; AltName: Full=RNA-binding region-containing
protein 2; AltName: Full=Splicing factor HCC1
gi|405194|gb|AAA16347.1| splicing factor [Homo sapiens]
gi|119596565|gb|EAW76159.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|119596567|gb|EAW76161.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|146327034|gb|AAI41836.1| RNA binding motif protein 39 [Homo sapiens]
gi|164623752|gb|ABY64678.1| RNA binding motif protein 39, isoform 1 (predicted) [Papio anubis]
gi|165971473|gb|AAI58173.1| RNA binding motif protein 39 [Homo sapiens]
gi|166831598|gb|ABY90123.1| RNA binding motif protein 39 isoform a (predicted) [Callithrix
jacchus]
gi|169731519|gb|ACA64891.1| RNA binding motif protein 39 isoform a (predicted) [Callicebus
moloch]
gi|197215647|gb|ACH53039.1| RNA binding motif protein 39 isoform a (predicted) [Otolemur
garnettii]
gi|217038339|gb|ACJ76632.1| RNA binding motif protein 39 isoform a (predicted) [Oryctolagus
cuniculus]
gi|229368730|gb|ACQ63013.1| RNA binding motif protein 39 isoform a (predicted) [Dasypus
novemcinctus]
gi|351702535|gb|EHB05454.1| RNA-binding protein 39 [Heterocephalus glaber]
gi|380783277|gb|AFE63514.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|383408125|gb|AFH27276.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|384939254|gb|AFI33232.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|410218746|gb|JAA06592.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255434|gb|JAA15684.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292900|gb|JAA25050.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292904|gb|JAA25052.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350859|gb|JAA42033.1| RNA binding motif protein 39 [Pan troglodytes]
gi|440902514|gb|ELR53299.1| RNA-binding protein 39 [Bos grunniens mutus]
Length = 530
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 169/460 (36%), Positives = 231/460 (50%), Gaps = 95/460 (20%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 193 SKGI---------------------AYVEFVDVSSV------------------------ 207
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
P+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 208 -----------PLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 250
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 251 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 310
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 311 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 366
Query: 496 TGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVIPNMA 546
TG+ A ++GSL S V I L + Q A + +A
Sbjct: 367 TGLQIPPAAQQALQMSGSLAFGAVAEFSFV----IDLQTRLSQQTEASALAAAASVQPLA 422
Query: 547 AEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVY 605
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY
Sbjct: 423 -------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVY 475
Query: 606 LRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 476 VKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 515
>gi|156363387|ref|XP_001626026.1| predicted protein [Nematostella vectensis]
gi|156212886|gb|EDO33926.1| predicted protein [Nematostella vectensis]
Length = 468
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/331 (40%), Positives = 187/331 (56%), Gaps = 48/331 (14%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
YIEF D +VP+AI LSGQ LLG P+MV ++AEKN + + GP +LY
Sbjct: 164 YIEFTDKSAVPLAIGLSGQKLLGAPIMVMLTQAEKNRLAAEAERLKQPLGP-----TRLY 218
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VG+LHFN+TE ++ +FEPFG V+ VQL D ET + KG+GFVQF + E AK A +NG
Sbjct: 219 VGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAMEQMNG 278
Query: 442 KLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDD---DGGGLALNAQSRALLMQKLDR--- 495
E+ GR LK+ VT+ D++A S F DD + GG+ LN+ +RA LM KL +
Sbjct: 279 -FELAGRPLKIGPVTER---GDSSAYS--FLDDEEYEKGGVELNSSARAALMAKLSQGHS 332
Query: 496 TGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSE 555
G++ G P V+G QQA++ PV + P+
Sbjct: 333 AGLSVP-----GAPPIVSGV---QQALATPVA----------------------VSLPTP 362
Query: 556 CLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAA 614
C +L NMFDP E D +DL+I+ DV EEC+K+G + HI+VDK S G VY++ + + A
Sbjct: 363 CFMLTNMFDPTKERDAGWDLDIRDDVLEECNKFGPIVHIHVDKNSPQGIVYVKCATPDIA 422
Query: 615 ASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
SA +++H RWFA + I A + +Y F
Sbjct: 423 ISASKSLHGRWFAGKQIIAAPVPLSNYHTMF 453
>gi|195471585|ref|XP_002088083.1| GE14328 [Drosophila yakuba]
gi|194174184|gb|EDW87795.1| GE14328 [Drosophila yakuba]
Length = 590
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/327 (40%), Positives = 185/327 (56%), Gaps = 36/327 (11%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA--GGTATGPYGAIDRK 379
YIEF D SV +A+ LSGQ LLG P+MV+ ++AEKN +Q+ A + TGP +
Sbjct: 278 YIEFEDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHTGPM-----R 332
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG ++ +QL +D ETG+ KG+GF+ + + AK A L
Sbjct: 333 LYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQL 392
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIA 499
NG E+ GR +KV +VT+ + D S D D+ D G+ L A R LM KL
Sbjct: 393 NG-FELAGRLMKVGNVTERL---DMNTTSLDTDEMDRTGIDLGATGRLQLMFKLAEGA-- 446
Query: 500 TSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLL 559
G AV Q A + + P P P P++A ++C +L
Sbjct: 447 --------------GLAVPQAAANALLATAPQ-PAPLQQQEAAPSIA-------TQCFIL 484
Query: 560 KNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQ 618
NMFDP ET+P +D+EI+ DV EEC+K+G V HI+VD S G VY++ ST A A
Sbjct: 485 SNMFDPRTETNPTWDVEIKDDVLEECAKHGGVLHIHVDTISPTGTVYVKCPSTTTAVLAV 544
Query: 619 RAMHMRWFARRLISAIFMKPEDYEAKF 645
A+H RWFA R+I+A ++ +Y F
Sbjct: 545 NALHGRWFAGRVITAAYVPVINYHTMF 571
>gi|194384132|dbj|BAG64839.1| unnamed protein product [Homo sapiens]
Length = 521
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 169/460 (36%), Positives = 231/460 (50%), Gaps = 95/460 (20%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 124 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 183
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 184 SKGI---------------------AYVEFVDVSSV------------------------ 198
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
P+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 199 -----------PLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 241
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 242 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 301
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 302 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 357
Query: 496 TGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVIPNMA 546
TG+ A ++GSL S V I L + Q A + +A
Sbjct: 358 TGLQIPPAAQQALQMSGSLAFGAVAEFSFV----IDLQTRLSQQTEASALAAAASVQPLA 413
Query: 547 AEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVY 605
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY
Sbjct: 414 -------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVY 466
Query: 606 LRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 467 VKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 506
>gi|194862772|ref|XP_001970115.1| GG10454 [Drosophila erecta]
gi|190661982|gb|EDV59174.1| GG10454 [Drosophila erecta]
Length = 593
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/327 (40%), Positives = 185/327 (56%), Gaps = 36/327 (11%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA--GGTATGPYGAIDRK 379
YIEF D SV +A+ LSGQ LLG P+MV+ ++AEKN +Q+ A + TGP +
Sbjct: 281 YIEFEDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHTGPM-----R 335
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG ++ +QL +D ETG+ KG+GF+ + + AK A L
Sbjct: 336 LYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQL 395
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIA 499
NG E+ GR +KV +VT+ + D S D D+ D G+ L A R LM KL
Sbjct: 396 NG-FELAGRLMKVGNVTERL---DMNTTSLDTDEMDRTGIDLGATGRLQLMFKLAEGA-- 449
Query: 500 TSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLL 559
G AV Q A + + P P P P++A ++C +L
Sbjct: 450 --------------GLAVPQAAANALLATAPQ-PAPMQQQEAAPSIA-------TQCFIL 487
Query: 560 KNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQ 618
NMFDP ET+P +D+EI+ DV EEC+K+G V HI+VD S G VY++ ST A A
Sbjct: 488 SNMFDPRTETNPTWDVEIRDDVLEECAKHGGVLHIHVDTISPTGTVYVKCPSTTTAVLAV 547
Query: 619 RAMHMRWFARRLISAIFMKPEDYEAKF 645
A+H RWFA R+I+A ++ +Y F
Sbjct: 548 NALHGRWFAGRVITAAYVPVINYHTMF 574
>gi|194386036|dbj|BAG59582.1| unnamed protein product [Homo sapiens]
Length = 503
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 168/459 (36%), Positives = 229/459 (49%), Gaps = 93/459 (20%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 106 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 165
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 166 SKGIA---------------------YVEFVDVSSV------------------------ 180
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
P+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 181 -----------PLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 223
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 224 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 283
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 284 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 339
Query: 496 TGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAA 547
TG+ A ++GSL S V L Q A + +A
Sbjct: 340 TGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRL---SQQTEASALAAAASVQPLA- 395
Query: 548 EFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYL 606
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY+
Sbjct: 396 ------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYV 449
Query: 607 RFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 450 KCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 488
>gi|147900472|ref|NP_001086350.1| MGC81970 protein [Xenopus laevis]
gi|49522239|gb|AAH75146.1| MGC81970 protein [Xenopus laevis]
Length = 512
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 162/479 (33%), Positives = 234/479 (48%), Gaps = 100/479 (20%)
Query: 189 RERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVR 248
R + R RE + + + PE ERD RTVF Q+ + RD+ EFFS GKVR
Sbjct: 97 RSKSRSPPKREKSPVRGPIDNLSPE---ERDSRTVFCMQLAARIRPRDLEEFFSTVGKVR 153
Query: 249 DVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETY 308
DVR+I DRNSRRSKG+ ++F + V + L G
Sbjct: 154 DVRMISDRNSRRSKGI---------------------AYVEFVDQSSVPLAIGLTG---- 188
Query: 309 TVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAG 366
Q +LG P++V+ S+AEKN +N
Sbjct: 189 -------------------------------QRVLGVPIIVQASQAEKNRAAALANNLQK 217
Query: 367 GTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF 426
GTA GP +LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F
Sbjct: 218 GTA-GPM-----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITF 271
Query: 427 AQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSR 486
+ E AK A LNG E+ GR +KV VT+ + A+ D D+ + G+ L R
Sbjct: 272 SDSECAKKALEQLNG-FELAGRPMKVGHVTERTDASN-ASSFLDSDELERTGIDLGTTGR 329
Query: 487 ALLMQKL-DRTGI--------ATSIAGSLGVAPAVN-GSAVNQQA---------ISLPVV 527
LM +L + TG+ A ++GSL + + ++QQ+ + +
Sbjct: 330 LQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRISQQSEALAAAAASAATISL 389
Query: 528 GQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSK 587
Q +P PA T P+ ++C L NMF+P E + +D EI+ DV EEC+K
Sbjct: 390 AQSPLPTPATTQPIA-----------TQCFQLSNMFNPQTEDELGWDSEIKEDVMEECNK 438
Query: 588 YGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+G HIYVDK S G VY++ + +A +A A+H RWFA ++I+A ++ Y + F
Sbjct: 439 HGGAIHIYVDKNSPQGNVYVKCSTITSAIAAVNALHGRWFAGKMITAAYVPVPTYHSLF 497
>gi|281346065|gb|EFB21649.1| hypothetical protein PANDA_004543 [Ailuropoda melanoleuca]
Length = 497
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 168/459 (36%), Positives = 229/459 (49%), Gaps = 93/459 (20%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 100 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 159
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 160 SKGI---------------------AYVEFVDVSSV------------------------ 174
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
P+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 175 -----------PLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 217
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 218 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 277
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 278 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 333
Query: 496 TGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAA 547
TG+ A ++GSL S V L Q A + +A
Sbjct: 334 TGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRL---SQQTEASALAAAASVQPLA- 389
Query: 548 EFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYL 606
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY+
Sbjct: 390 ------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYV 443
Query: 607 RFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 444 KCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 482
>gi|410953912|ref|XP_003983612.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39 [Felis
catus]
Length = 523
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 161/449 (35%), Positives = 223/449 (49%), Gaps = 80/449 (17%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 193 SKGI---------------------AYVEFVDVSSV------------------------ 207
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKL 380
P+AI L+GQ +LG P++V+ S+AEK + + GP +L
Sbjct: 208 -----------PLAIGLTGQRVLGVPIIVQASQAEKRAAAMANNLQKGSAGPM-----RL 251
Query: 381 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 440
YVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A LN
Sbjct: 252 YVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLN 311
Query: 441 GKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DRTG 497
G E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L + TG
Sbjct: 312 G-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTG 367
Query: 498 IATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECL 557
L + PA + +++ V + T AA ++C
Sbjct: 368 --------LQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLATQCF 419
Query: 558 LLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAAS 616
L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S AA +
Sbjct: 420 QLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIA 479
Query: 617 AQRAMHMRWFARRLISAIFMKPEDYEAKF 645
A A+H RWFA ++I+A ++ Y F
Sbjct: 480 AVNALHGRWFAGKMITAAYVPLPTYHNLF 508
>gi|452820290|gb|EME27334.1| RNA-binding protein [Galdieria sulphuraria]
Length = 596
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 139/370 (37%), Positives = 202/370 (54%), Gaps = 60/370 (16%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTS----------------- 364
Y+EFY ++P A+ L+GQ L G PV +KPSEAEKN+ +
Sbjct: 231 YVEFYYKEAIPSAMRLAGQQLCGYPVAIKPSEAEKNIAAEMAAREAAAAQQARLAELEEW 290
Query: 365 AGGTATGPYG--AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFG 422
+GG T P KLYVG++HF+++E LR +FEPFG V +QL D ETG+ +GFG
Sbjct: 291 SGGGDTSPNSNPLTFTKLYVGSIHFSISEDDLRTIFEPFGEVISLQLHKDPETGRSRGFG 350
Query: 423 FVQFAQLEHAKAAQSALNGKLEIVGRTLKV-----------------SSVTDHVGTQDTA 465
FVQ+ E AK A LNG L++ GR LKV S V + Q +
Sbjct: 351 FVQYKNHEDAKKAFEQLNG-LDLAGRPLKVGLATAEAQKLQVLGAIPSGVPGTIAAQSLS 409
Query: 466 AKSADFDD-----DDGG--GLALNAQSRALLMQKLDRT-GIATSIAGSLGV-APAVNGSA 516
+K+ + D+GG G+AL+A R LMQ+L R +A+ + +LG +P + S
Sbjct: 410 SKNYAYSAYISELDEGGDSGMALSATQRTQLMQRLARGEALASKSSPALGGKSPGLLSSE 469
Query: 517 VNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLE 576
+ Q+ ++P P++ ++ SPS CL+L+NMFDPA ETDP+F LE
Sbjct: 470 ASPQSGTVPT-------RQGYNPPLVHSI------SPSTCLMLRNMFDPAQETDPNFHLE 516
Query: 577 IQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIF 635
+Q DV +EC SK+G ++HI+VDK SAG VY++FE+ A A++ +H RWFA + +
Sbjct: 517 VQEDVRDECISKFGPLRHIFVDKNSAGLVYVQFETMSDAMKAKQGLHGRWFAGHQVIVEY 576
Query: 636 MKPEDYEAKF 645
+ Y +F
Sbjct: 577 ISESVYYIRF 586
>gi|157108428|ref|XP_001650224.1| splicing factor [Aedes aegypti]
gi|108879330|gb|EAT43555.1| AAEL005046-PA [Aedes aegypti]
Length = 544
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 130/327 (39%), Positives = 178/327 (54%), Gaps = 35/327 (10%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTS--AGGTATGPYGAIDRK 379
YIEF D SV +A+ LSGQ LLG P+ V+ ++AEKN + S +GP +
Sbjct: 234 YIEFKDPESVALALGLSGQRLLGIPISVQHTQAEKNRMASTPPQPPPKVTSGPM-----R 288
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG ++ +QL +D +TG+ KG+GF+ F + AK A L
Sbjct: 289 LYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDSDTGRSKGYGFITFHNADDAKKALEQL 348
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIA 499
NG E+ GR +KV +VT+ + T S D D+ D G+ L A R LM KL
Sbjct: 349 NG-FELAGRPMKVGNVTERLDV--TTHASLDTDEMDRSGIDLGATGRLQLMFKL------ 399
Query: 500 TSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLL 559
A G+A + P QP P P + ++C LL
Sbjct: 400 ---AEGAGLAVPRAAADALLATAPQPAPQQPVAPSPPIA---------------TQCFLL 441
Query: 560 KNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQ 618
NMFDP ET+P +D EI+ DV EEC+K+G V H+YVDK + AG VY++ S A A
Sbjct: 442 SNMFDPTTETNPTWDTEIEDDVIEECNKHGGVLHVYVDKENPAGNVYVKCPSIATAVLAV 501
Query: 619 RAMHMRWFARRLISAIFMKPEDYEAKF 645
A+H RWFA R+I+A ++ +Y F
Sbjct: 502 NALHGRWFAGRIITAAYVPLVNYHTLF 528
>gi|346465875|gb|AEO32782.1| hypothetical protein [Amblyomma maculatum]
Length = 558
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 155/439 (35%), Positives = 217/439 (49%), Gaps = 82/439 (18%)
Query: 210 VEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIM 269
+ PE ERD RTVF Q+ + RD+ EFFS GKVRDVRLIMD +RRSKG+
Sbjct: 189 ITPE---ERDMRTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMDNKTRRSKGIA---- 241
Query: 270 MRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVM 329
++F V V + L G
Sbjct: 242 -----------------YVEFLDVESVPLAMGLNG------------------------- 259
Query: 330 SVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID-RKLYVGNLHFN 388
Q L G P++V+P++AE+N + ++ ++T G + +LYVG+LHFN
Sbjct: 260 ----------QKLFGIPIVVQPTQAERNRAAAQNASTSSSTLQRGNVGPMRLYVGSLHFN 309
Query: 389 MTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGR 448
+TE L+ +FEPFG ++ ++L D+ET + KG+GF+ F E AK A LNG E+ GR
Sbjct: 310 ITEDMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQLNG-FELAGR 368
Query: 449 TLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIAGSLG 507
+KV VT+ A D ++ D G+ L A R LM KL + TG A
Sbjct: 369 PMKVGHVTERTDVSQ-APSFLDSEELDRSGIDLGATGRLQLMAKLAEGTGFQIPQA---- 423
Query: 508 VAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAM 567
AVN A+ LP GQP A A P +A ++C LL NMFDP
Sbjct: 424 ---AVN--ALQMNTTGLP--GQPQAAAVAAAAAAAPTIA-------TQCFLLSNMFDPLT 469
Query: 568 ETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWF 626
ET+P +D EI+ DV EEC K+G H+YVD+ S G VY++ + +A ++ A+H RWF
Sbjct: 470 ETNPSWDEEIRRDVIEECRKHGGALHVYVDRASPEGHVYVKCPTIASAVASVNALHGRWF 529
Query: 627 ARRLISAIFMKPEDYEAKF 645
A R+I+A ++ Y F
Sbjct: 530 AGRIITAAYVPVMSYHTLF 548
>gi|195116809|ref|XP_002002944.1| GI10246 [Drosophila mojavensis]
gi|193913519|gb|EDW12386.1| GI10246 [Drosophila mojavensis]
Length = 617
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/327 (39%), Positives = 183/327 (55%), Gaps = 36/327 (11%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA--GGTATGPYGAIDRK 379
YIEF D SV +A+ LSGQ LLG P+MV+ ++AEKN +QS TGP +
Sbjct: 305 YIEFEDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQSAPPPFQPKAHTGPM-----R 359
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG ++ +QL +D ETG+ KG+GF+ + + AK A L
Sbjct: 360 LYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQL 419
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIA 499
NG E+ GR +KV +VT+ + D S D D+ D G+ L A R LM KL
Sbjct: 420 NG-FELAGRPMKVGNVTERL---DMNTSSLDTDEMDRSGIDLGATGRLQLMFKLAEGA-- 473
Query: 500 TSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLL 559
G AV Q A + + P P P + P++A ++C +L
Sbjct: 474 --------------GLAVPQAAANALLATAPQ-PAPVLQQQQTPSIA-------TQCFIL 511
Query: 560 KNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQ 618
NMFDP ET+P + +++ DV +EC+K+G V HI+VD S G VY++ ST A A
Sbjct: 512 SNMFDPRTETNPTWATDVRDDVLDECAKHGGVLHIHVDTVSPTGTVYVKCPSTTTAVLAV 571
Query: 619 RAMHMRWFARRLISAIFMKPEDYEAKF 645
A+H RWFA R+I+A ++ +Y + F
Sbjct: 572 NALHGRWFAGRVITAAYVPVINYHSMF 598
>gi|357612395|gb|EHJ67964.1| putative RNA-binding region-containing protein [Danaus plexippus]
Length = 536
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 132/330 (40%), Positives = 185/330 (56%), Gaps = 42/330 (12%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTS--AGGTATGPYGAIDRK 379
YIEF D SVP+A+ L+GQ LLG P++V+ ++AEKN V + A T+ GP +
Sbjct: 227 YIEFKDAESVPLALGLTGQKLLGVPIIVQHTQAEKNRVGNTLPNLAPKTSNGP-----TR 281
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG ++ +QL D +TG+ KG+GF+ F AK A L
Sbjct: 282 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPDTGKSKGYGFLTFHHATDAKKAMEQL 341
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDD--DGGGLALNAQSRALLMQKL-DRT 496
NG E+ GR +KV +VT+ S FD D D G+ L A R LM KL + T
Sbjct: 342 NG-FELAGRPMKVGNVTERA----DGGSSTRFDADELDRAGVDLGATGRLQLMFKLAEGT 396
Query: 497 GIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSEC 556
G L + PA ++V A S V QP V P T +C
Sbjct: 397 G--------LQIPPA--AASVLMGAGSTLVAPQPQVAPPIAT----------------QC 430
Query: 557 LLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAA 615
+L NMFDP+ E++P +D+EI+ DV EC+K+G V H+YVDK S G VY + + A
Sbjct: 431 FMLNNMFDPSSESNPSWDIEIRDDVISECNKHGGVLHVYVDKASPQGNVYCKCPTIATAV 490
Query: 616 SAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
++ ++H RWFA R+I+A ++ +Y + F
Sbjct: 491 ASVNSLHGRWFAGRVITAAYVPLVNYHSLF 520
>gi|194758325|ref|XP_001961412.1| GF14957 [Drosophila ananassae]
gi|190615109|gb|EDV30633.1| GF14957 [Drosophila ananassae]
Length = 594
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 167/500 (33%), Positives = 233/500 (46%), Gaps = 110/500 (22%)
Query: 149 RRSSSQSRRSSSRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKE 208
R S + R+ S R ++R S R R +R E+
Sbjct: 183 RLSPIRERKRSHS--RSKDRNSRRRGSYSPRRRSPANGAGGDRTPPTEL----------- 229
Query: 209 VVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAI 268
PE ERD RTVF Q+ + RD+ EFFS GKVRDVRLI+ ++R KG+
Sbjct: 230 --SPE---ERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLILCNKTKRFKGI---- 280
Query: 269 MMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDV 328
I+F DP +V +
Sbjct: 281 -----------------AYIEF--------------------EDPESVAL---------- 293
Query: 329 MSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA--GGTATGPYGAIDRKLYVGNLH 386
A+ LSGQ LLG P+MV+ ++AEKN +Q+ A + TGP +LYVG+LH
Sbjct: 294 -----ALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHTGPM-----RLYVGSLH 343
Query: 387 FNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIV 446
FN+TE LR +FEPFG ++ +QL +D ETG+ KG+GF+ + + AK A LNG E+
Sbjct: 344 FNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNG-FELA 402
Query: 447 GRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSL 506
GR +KV +VT+ + D S D D+ D G+ L A R LM KL A
Sbjct: 403 GRLMKVGNVTERL---DMNTSSLDTDEMDRTGIDLGATGRLQLMFKL---------AEGA 450
Query: 507 GVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPA 566
G+A + P Q P++ ++C +L NMFDP
Sbjct: 451 GLAVPQAAANALLATAPQPAPVQQQQQAPSIA---------------TQCFILSNMFDPR 495
Query: 567 METDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQRAMHMRW 625
ET+P +D EI+ DV EEC+K+G V HI+VD S G VY++ ST A A A+H RW
Sbjct: 496 TETNPTWDAEIRDDVLEECAKHGGVLHIHVDTVSPTGTVYVKCPSTTTAVLAVNALHGRW 555
Query: 626 FARRLISAIFMKPEDYEAKF 645
FA R+I+A ++ +Y + F
Sbjct: 556 FAGRVITAAYVPLVNYHSMF 575
>gi|432858814|ref|XP_004068952.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Oryzias latipes]
Length = 502
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 161/441 (36%), Positives = 224/441 (50%), Gaps = 88/441 (19%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNT 276
ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG+
Sbjct: 122 ERDGRTVFCMQLAARIRPRDLEEFFSAVGKVRDVRMISDRNSRRSKGIA----------- 170
Query: 277 LHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIA 336
I+F + V + L
Sbjct: 171 ----------YIEFVEASSVPLAIGL---------------------------------- 186
Query: 337 LSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRK 396
+GQ LLG P++V+ S+AEKN + +A G G + +LYVG+LHFN+TE LR
Sbjct: 187 -TGQRLLGVPIIVQASQAEKNRAAAAAAANNLQRGLTGPM--RLYVGSLHFNITEDMLRG 243
Query: 397 LFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVT 456
+FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A LNG E+ GR +KV VT
Sbjct: 244 IFEPFGRIENIQLMMDSETGRSKGYGFITFSDAECAKKALEQLNG-FELAGRPMKVGHVT 302
Query: 457 DHVGTQDTAAKSA-DFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIAGSLGVAPAVNG 514
+ T ++A S D D+ + G+ L R LM +L + TG L + PA
Sbjct: 303 ER--TDPSSAPSILDNDELERSGIDLGTTGRLQLMARLAEGTG--------LQIPPAA-- 350
Query: 515 SAVNQQAISLPVVGQPAVPVPAVTAPVIP----NMAAEFIGSPSE-----CLLLKNMFDP 565
QQA+ + + AV+A + P NM + + PS+ C L NMF+P
Sbjct: 351 ----QQALQMSGAIA-IGAMAAVSAAMNPSLNVNMNSGALNLPSQPLATHCFQLSNMFNP 405
Query: 566 AMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMR 624
+ E ++++IQ DV EEC+K+G V HIYVDK SA G VY++ S AA SA A+H R
Sbjct: 406 SSENTFGWEVDIQRDVIEECNKHGGVVHIYVDKNSAEGNVYVKCPSIPAAMSAVNALHGR 465
Query: 625 WFARRLISAIFMKPEDYEAKF 645
+F ++I+A ++ Y F
Sbjct: 466 FFGGKMITAAYVPLPTYHKLF 486
>gi|195996811|ref|XP_002108274.1| hypothetical protein TRIADDRAFT_37071 [Trichoplax adhaerens]
gi|190589050|gb|EDV29072.1| hypothetical protein TRIADDRAFT_37071 [Trichoplax adhaerens]
Length = 351
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 144/422 (34%), Positives = 216/422 (51%), Gaps = 90/422 (21%)
Query: 227 QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCC 286
Q+ + R + E FS G++RD+R+I DRNSRRSKG+
Sbjct: 2 QLAGRTGRRQLEELFSPVGEMRDIRVIADRNSRRSKGIA--------------------- 40
Query: 287 VIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQP 346
V +R ++ SV A+ L+G + G P
Sbjct: 41 ------------------------------YVEFRLVD-----SVDKALKLNGTKVEGIP 65
Query: 347 VMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVEL 406
+M++ +++EKN + + + GP +LY+G+LH+N+ E LR +FEPFG VE
Sbjct: 66 IMIQRTQSEKNKIAALQAQQKAQQGP-----TRLYIGSLHYNINEDMLRAIFEPFGLVEN 120
Query: 407 VQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAA 466
V + D +T KG+GF+Q+ + + A+ A LNG LE+ GR +KV +VTD + D +A
Sbjct: 121 VNIIRDSDTNVSKGYGFIQYKEPDSARRALEQLNG-LEVAGRPIKVGTVTDR--SADLSA 177
Query: 467 KSADFDDDDG--GGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISL 524
SA DDDD GG+ +N+ SR LM KL +T AT++ V +L
Sbjct: 178 MSA-LDDDDTERGGIEMNSLSRVALMAKLSQTHNATTVP-------VSVPVPVPVPGPTL 229
Query: 525 PVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEE 584
P G +IP AA + + S C L+ NMFDPA ETD D+DL+I+ D+ EE
Sbjct: 230 PATG------------LIP--AANTVQA-SPCFLISNMFDPAKETDQDWDLDIRDDIIEE 274
Query: 585 CSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEA 643
C+K+G V H+YVDK S G VY++ ++ + AA A ++++ RWFA +I+A F+ Y
Sbjct: 275 CNKHGNVYHVYVDKTSPKGIVYVKCQTIDVAARAVKSLNGRWFAGNMITAQFLSLASYHT 334
Query: 644 KF 645
F
Sbjct: 335 TF 336
>gi|449265754|gb|EMC76900.1| RNA-binding protein 39, partial [Columba livia]
Length = 423
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 166/460 (36%), Positives = 229/460 (49%), Gaps = 103/460 (22%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 34 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 93
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V + L
Sbjct: 94 SKGIA---------------------YVEFVDVSSVPLAIGL------------------ 114
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 115 -----------------TGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 151
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 152 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 211
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 212 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 267
Query: 496 TGI--------ATSIAGSLGVAPAVNGSA-VNQQAISLPVVGQPAVPVPAVTAPVIPNMA 546
TG+ A ++GSL + ++QQ L A A V P
Sbjct: 268 TGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQNEVL-----------AAAASVQP--- 313
Query: 547 AEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVY 605
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY
Sbjct: 314 -----LATQCFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVY 368
Query: 606 LRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
++ S AA +A A+H RWFA ++I+A ++ Y + F
Sbjct: 369 VKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHSLF 408
>gi|395863336|ref|XP_003803852.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Otolemur
garnettii]
gi|395863340|ref|XP_003803854.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Otolemur
garnettii]
Length = 514
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 189/582 (32%), Positives = 274/582 (47%), Gaps = 120/582 (20%)
Query: 87 HRRDRDRDRDRGRERERETERDRERSRERREKEKERERRE-RRDREKERERERDGERRSS 145
++ D D+ ER +R +SR R ++ K R+E +R R++ER+R R ER+ S
Sbjct: 15 YKTDEDKLSSANGHGERSKKRGESKSRSRTDEPKRSRRKEGKRSRDRERKRSRSPERKRS 74
Query: 146 SRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELRERERDLEMRESRR-YK 204
R S+SR R R R + ++R + L +R+ + +
Sbjct: 75 RSKERRRSRSRSRDGRFRGRYTSPYSRPK---------FNSDIRG-QTGLPLRKDKSPVR 124
Query: 205 EKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGV 264
E + + PE ERD RTVF Q+ + RD+ FFS GKVRDVR+I DRN+RRSKG+
Sbjct: 125 EPIDNLTPE---ERDARTVFCMQLAARIRPRDLEAFFSTVGKVRDVRMISDRNARRSKGI 181
Query: 265 GNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIE 324
++F V+ V
Sbjct: 182 ---------------------AYVEFVDVSSV---------------------------- 192
Query: 325 FYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYV 382
P+AI L+GQ + G P++V+ S+AEKN +N G A GP +LYV
Sbjct: 193 -------PLAIGLTGQRVFGVPILVRASQAEKNRAAAMANNLQKGRA-GPM-----RLYV 239
Query: 383 GNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGK 442
G+LH N+TE LR +FEPFG +E +QL D ETG+ KG+GF+ F+ E AK A LNG
Sbjct: 240 GSLHLNITEAMLRGIFEPFGRLESIQLMKDSETGRSKGYGFITFSDSECAKKALEQLNG- 298
Query: 443 LEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSI 502
LE+ GR +KV VT+ GT + A S F + D +L+RTGI
Sbjct: 299 LELAGRPMKVGHVTE--GTDASTASS--FLNSD----------------ELERTGIDLGT 338
Query: 503 AG------------SLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFI 550
AG L + PA + ++ + + + +T A++
Sbjct: 339 AGGLQFMARLAEGTGLQIPPAAQQALQMNSPLAFGATAEFSFRLDLLTRLSQQTQASDLA 398
Query: 551 GSPS------ECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GF 603
+ S +C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G
Sbjct: 399 AAASVQPLATQCFQLSNMFNPQTE-EVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGN 457
Query: 604 VYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
VY++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 458 VYVKCPSIAAAVAAVSALHGRWFAGKMITAAYVPLPTYHNLF 499
>gi|355784531|gb|EHH65382.1| RNA-binding motif protein 39 [Macaca fascicularis]
Length = 530
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 166/460 (36%), Positives = 228/460 (49%), Gaps = 95/460 (20%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V + L
Sbjct: 193 SKGI---------------------AYMEFVDVSSVPLAIGL------------------ 213
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 214 -----------------TGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 250
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 251 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 310
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 311 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 366
Query: 496 TGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVIPNMA 546
TG+ A ++GSL S V I L + Q A + +A
Sbjct: 367 TGLQIPPAAQQALQMSGSLAFGAVAEFSFV----IDLQTRLSQQTEASALAAAASVQPLA 422
Query: 547 AEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVY 605
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY
Sbjct: 423 -------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVY 475
Query: 606 LRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 476 VKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 515
>gi|209154564|gb|ACI33514.1| RNA-binding protein 39 [Salmo salar]
Length = 525
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 168/458 (36%), Positives = 224/458 (48%), Gaps = 94/458 (20%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
KEK V +P PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 130 KEKSPVRQPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDVRMISDRNSRR 189
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ I+F V + L G
Sbjct: 190 SKGI---------------------AYIEFVEANSVPLAIGLSG---------------- 212
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSE--AEKN--LVQSNTSAGGTATGPYGAI 376
Q LLG P++V+ S+ AEKN +N G A GP
Sbjct: 213 -------------------QRLLGVPIIVQASQVMAEKNRAAAMANNLQKGNA-GPM--- 249
Query: 377 DRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQ 436
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 250 --RLYVGSLHFNITEEMLRGIFEPFGKIESIQLMMDSETGRSKGYGFITFSDTECAKKAL 307
Query: 437 SALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ TA+ D D+ + G+ L R LM +L +
Sbjct: 308 DQLNG-FELAGRPMKVGHVTERTDAS-TASSFLDSDELERTGIDLGTTGRLQLMARLAEG 365
Query: 496 TGIATSIAGSLGVAPAVNGSAVNQQAI--SLPVVGQPAVPVPAVTAPVIPNMAAEFIGSP 553
TG L + PA QQA+ S + V A P + + P
Sbjct: 366 TG--------LQIPPAA------QQALQMSGAIAIGAMAAVSAAMNPAMNMNMNTAMNLP 411
Query: 554 SE-----CLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLR 607
S+ C L NMF+P E +PD+D++IQ DV EEC+K+G V HIYVDK S G VY++
Sbjct: 412 SQPLATHCFQLSNMFNPQSEDNPDWDVDIQHDVIEECNKHGGVVHIYVDKNSTEGNVYVK 471
Query: 608 FESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
S AA +A A+H R+FA ++I+A ++ Y F
Sbjct: 472 CPSIPAAMAAVNALHGRYFAGKMITAAYVPLPTYHNLF 509
>gi|221111756|ref|XP_002159647.1| PREDICTED: RNA-binding protein 39-like [Hydra magnipapillata]
Length = 528
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/327 (40%), Positives = 182/327 (55%), Gaps = 45/327 (13%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF D +V +AI LSGQ LLG P+MV P+ AEKN + +A GP KLY
Sbjct: 229 YVEFTDASAVTLAIKLSGQKLLGVPIMVSPTMAEKNRYAAAQAALVKPQGPM-----KLY 283
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VG+LH+N+TE LR +FEPFG VE VQL D ET + KGFGFV F + AK A +NG
Sbjct: 284 VGSLHYNITEPMLRAIFEPFGTVESVQLQYDSETNRSKGFGFVNFREAGAAKRAMEQMNG 343
Query: 442 KLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATS 501
E+ GR +KV++V++ D + D ++ + GG+ +NAQSRA LMQKL +T
Sbjct: 344 -FELAGRPMKVNTVSERT---DGSMSFLDDEETEKGGIEMNAQSRASLMQKLAQT----- 394
Query: 502 IAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIG--SPSECLLL 559
+GS + VP TAP+IP M + + S CL+L
Sbjct: 395 -----------HGSGLQ-------------VP----TAPIIPAMLPTPMMNVAGSTCLIL 426
Query: 560 KNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQ 618
N+FDP ET+ D++L+I+ DV EE +K G V HI +DK SA G VY++ + A
Sbjct: 427 SNLFDPRKETESDWELDIRNDVLEEVTKMGIVVHISIDKISAEGNVYIKTLIPDTAQKIL 486
Query: 619 RAMHMRWFARRLISAIFMKPEDYEAKF 645
+ + RWFA R I A+ + +Y F
Sbjct: 487 QTFNGRWFAGRTIRAVAIPVANYNTMF 513
>gi|427792527|gb|JAA61715.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 497
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 153/441 (34%), Positives = 219/441 (49%), Gaps = 88/441 (19%)
Query: 210 VEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIM 269
+ PE ERD RTVF Q+ + RD+ EFFS GKVRDVRLIMD +RRSKG+
Sbjct: 130 ITPE---ERDMRTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMDNKTRRSKGI----- 181
Query: 270 MRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVM 329
++F V V + L G + + +
Sbjct: 182 ----------------AYVEFQDVESVPLAMGLNGQKLFGI------------------- 206
Query: 330 SVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID-RKLYVGNLHFN 388
P++V+P++AE+N + ++ +T G + +LYVG+LHFN
Sbjct: 207 ----------------PIVVQPTQAERNRAAAQNASTSNSTLQRGNVGPMRLYVGSLHFN 250
Query: 389 MTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGR 448
+TE L+ +FEPFG ++ ++L D+ET + KG+GF+ F E AK A LNG E+ GR
Sbjct: 251 ITEEMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQLNG-FELAGR 309
Query: 449 TLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTG--IATSIAGS 505
+KV VT+ A D ++ D G+ L A R LM KL + TG I + +
Sbjct: 310 PMKVGHVTERTDVSQ-APSFLDSEELDRSGIDLGATGRLQLMAKLAEGTGFQIPQAAVNA 368
Query: 506 LGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDP 565
L + PAV LP GQP AV A P +A ++C LL NMFDP
Sbjct: 369 LQMNPAV-----------LP--GQPQ--AAAVAAAAAPTIA-------TQCFLLSNMFDP 406
Query: 566 AMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMR 624
ET+P +D EI+ DV EEC K+G H+YVD+ S G VY++ + +A ++ A+H R
Sbjct: 407 LTETNPSWDEEIRRDVIEECRKHGGALHVYVDRASPEGHVYVKCPTIASAVASVNALHGR 466
Query: 625 WFARRLISAIFMKPEDYEAKF 645
WFA R+I+A ++ Y F
Sbjct: 467 WFAGRIITAAYVPVMSYHTLF 487
>gi|17063213|gb|AAL32373.1| transcription coactivator CAPER [Mus musculus]
Length = 530
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 165/460 (35%), Positives = 228/460 (49%), Gaps = 95/460 (20%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
S+G+ ++F V+ V + L
Sbjct: 193 SRGI---------------------AYVEFVDVSSVRLAIGL------------------ 213
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 214 -----------------TGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 250
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 251 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 310
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 311 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 366
Query: 496 TGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVIPNMA 546
TG+ A ++GSL S V I L + Q A + +A
Sbjct: 367 TGLQIPPAAQQALQMSGSLAFGAVAEFSFV----IDLQTRLSQQTEASALAAAASVQPLA 422
Query: 547 AEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVY 605
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY
Sbjct: 423 -------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVY 475
Query: 606 LRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 476 VKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 515
>gi|356514806|ref|XP_003526094.1| PREDICTED: uncharacterized protein LOC100782991 [Glycine max]
Length = 390
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/222 (55%), Positives = 143/222 (64%), Gaps = 41/222 (18%)
Query: 197 MRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDR 256
M + RR+++KKE EPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGK + +L +
Sbjct: 94 MGDGRRFRDKKEAAEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKNVECKLGFAK 153
Query: 257 N--------SRRSKGVGNAIMMRDDGNTLHSCLI---NSCCVIKFFLVAEVGMVFFLLGD 305
SR K + IM ++D + LI N C
Sbjct: 154 FCGINAVGLSRGRKSLLKPIMAKEDHG---ASLIDDGNPKC------------------- 191
Query: 306 ETYTV-----LDPATVLVSY--RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNL 358
+ + V ++P+T L + YIEFYD MSVPMAIALSGQLLLGQPVMVKPSEAEKNL
Sbjct: 192 QGHQVNKPNGINPSTALSAQPDLYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNL 251
Query: 359 VQSNTSAGGTA-TGPYGAIDRKLYVGNLHFNMTETQLRKLFE 399
VQSN S G TG YGA+DRKLYVGNLHFNMTE+QLR+ F
Sbjct: 252 VQSNASGGAAGVTGSYGAVDRKLYVGNLHFNMTESQLREFFH 293
>gi|193785136|dbj|BAG54289.1| unnamed protein product [Homo sapiens]
Length = 506
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 165/459 (35%), Positives = 226/459 (49%), Gaps = 93/459 (20%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 109 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 168
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V + L
Sbjct: 169 SKGIA---------------------YVEFVDVSSVPLAIGL------------------ 189
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 190 -----------------TGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 226
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 227 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 286
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 287 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 342
Query: 496 TGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAA 547
TG+ A ++GSL S V L Q A + +A
Sbjct: 343 TGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRL---SQQTEASALAAAASVQPLA- 398
Query: 548 EFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYL 606
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY+
Sbjct: 399 ------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYV 452
Query: 607 RFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 453 KCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 491
>gi|393218616|gb|EJD04104.1| splicing factor, CC1-like protein [Fomitiporia mediterranea MF3/22]
Length = 464
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 152/453 (33%), Positives = 224/453 (49%), Gaps = 121/453 (26%)
Query: 198 RESRRYKEKKE---VVEPEADPERDQRTVFAYQMPLKATERDVYEFF-SKAG--KVRDVR 251
RES Y E + EP+ D + + R+VF Q+ + T RD+ FF K G V DVR
Sbjct: 110 RESPSYDEAPSDPYMDEPKED-DSEARSVFVSQLAARMTARDLGYFFEDKLGDNSVLDVR 168
Query: 252 LIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVL 311
++ DR SRRSKG+
Sbjct: 169 IVTDRISRRSKGI----------------------------------------------- 181
Query: 312 DPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAG-GTAT 370
V + IE D AI+L+G +++G P+M++ +EAE+N T AG G+
Sbjct: 182 ----AYVEFGSIELVD-----KAISLTGTIVMGLPIMIQHTEAERN----KTHAGDGSIN 228
Query: 371 GPYGAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQ 428
P GA R LYVG+LHFN+TE+ ++++FEPFG ++ V L D TG+ KG+ F+ + +
Sbjct: 229 LPPGASGRGATLYVGSLHFNLTESDIKQVFEPFGELDFVDLHKDSATGRSKGYAFIHYKR 288
Query: 429 LEHAKAAQSALNGKLEIVGRTLKVSSVTDH----VGTQDTAAKSADFDDDDGGGLALNAQ 484
E AK A + G E+ GRTL+V++V + + TQD+ D+ GG LNA
Sbjct: 289 AEDAKMALEQMEG-FELAGRTLRVNTVHEKGQTRISTQDSL--------DESGGGNLNAA 339
Query: 485 SRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPN 544
SR LMQKL R ++ + V QQ I P V QP
Sbjct: 340 SRQALMQKLAR----------------IDSAPVTQQPIMKPTVAQPMT------------ 371
Query: 545 MAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGF 603
S+ +L++NMFDP ET+P +D ++ DV+ EC +KYGRV+HI V+K S G
Sbjct: 372 ---------SKSVLMRNMFDPEEETEPAWDKDLAEDVKTECQAKYGRVQHIKVEKDSEGE 422
Query: 604 VYLRFESTEAAASAQRAMHMRWFARRLISAIFM 636
+Y++F++ +AA +A ++ RWF + ISA F+
Sbjct: 423 IYVQFDTVDAAKAAINGLNGRWFGGKQISATFI 455
>gi|427794973|gb|JAA62938.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 509
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 153/441 (34%), Positives = 219/441 (49%), Gaps = 88/441 (19%)
Query: 210 VEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIM 269
+ PE ERD RTVF Q+ + RD+ EFFS GKVRDVRLIMD +RRSKG+
Sbjct: 142 ITPE---ERDMRTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMDNKTRRSKGIA---- 194
Query: 270 MRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVM 329
++F V V + L G + + +
Sbjct: 195 -----------------YVEFQDVESVPLAMGLNGQKLFGI------------------- 218
Query: 330 SVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID-RKLYVGNLHFN 388
P++V+P++AE+N + ++ +T G + +LYVG+LHFN
Sbjct: 219 ----------------PIVVQPTQAERNRAAAQNASTSNSTLQRGNVGPMRLYVGSLHFN 262
Query: 389 MTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGR 448
+TE L+ +FEPFG ++ ++L D+ET + KG+GF+ F E AK A LNG E+ GR
Sbjct: 263 ITEEMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQLNG-FELAGR 321
Query: 449 TLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTG--IATSIAGS 505
+KV VT+ A D ++ D G+ L A R LM KL + TG I + +
Sbjct: 322 PMKVGHVTERTDVSQ-APSFLDSEELDRSGIDLGATGRLQLMAKLAEGTGFQIPQAAVNA 380
Query: 506 LGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDP 565
L + PAV LP GQP AV A P +A ++C LL NMFDP
Sbjct: 381 LQMNPAV-----------LP--GQPQ--AAAVAAAAAPTIA-------TQCFLLSNMFDP 418
Query: 566 AMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMR 624
ET+P +D EI+ DV EEC K+G H+YVD+ S G VY++ + +A ++ A+H R
Sbjct: 419 LTETNPSWDEEIRRDVIEECRKHGGALHVYVDRASPEGHVYVKCPTIASAVASVNALHGR 478
Query: 625 WFARRLISAIFMKPEDYEAKF 645
WFA R+I+A ++ Y F
Sbjct: 479 WFAGRIITAAYVPVMSYHTLF 499
>gi|402588492|gb|EJW82425.1| splicing factor, partial [Wuchereria bancrofti]
Length = 471
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 147/431 (34%), Positives = 208/431 (48%), Gaps = 83/431 (19%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNT 276
ERDQRTVF Q+ + RD+ EFFS G VRDVR+I D +RRSKG+
Sbjct: 94 ERDQRTVFILQIAKETRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGI------------ 141
Query: 277 LHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIA 336
C V EF+++ SV +A+A
Sbjct: 142 --------CYV------------------------------------EFWEIESVNLALA 157
Query: 337 LSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID-RKLYVGNLHFNMTETQLR 395
L+GQ LLG P++++P+ AE+N +NT G GP KLYVG LH ++TE L
Sbjct: 158 LNGQKLLGAPLVIQPTLAERNRAANNTVGGTLGFGPTNTTGPLKLYVGQLHTSITEDMLG 217
Query: 396 KLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSV 455
++F+PFG +E +++ D+ +G KG+ +V F + K A +NG E+ GR +KV SV
Sbjct: 218 RIFDPFGKIENLEIATDL-SGVSKGYAYVTFRHADDGKRAMEQMNG-FELAGRPMKVCSV 275
Query: 456 TDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGS 515
++ D DD D G+ L R LM KL G + S A
Sbjct: 276 EGDELPPPVPQRTLDTDDADRRGIDLGTSGRLHLMAKLAE-GSGLELPKS-----AKEIL 329
Query: 516 AVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDL 575
A NQQ + VT P IP +A ++C +L NMFDP+ ET +
Sbjct: 330 AQNQQQLE----------SATVTGPAIPPIA-------TQCFMLSNMFDPSQETGETWAD 372
Query: 576 EIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAI 634
E++ DV EEC+K G V HI+VDK S G VY++ S AA + A+H RWF+ ++I+A
Sbjct: 373 EVRDDVIEECAKNGGVLHIFVDKASPNGNVYVKCPSVAAAFKSVNALHGRWFSGKVITAN 432
Query: 635 FMKPEDYEAKF 645
++ Y F
Sbjct: 433 YVPVASYSQLF 443
>gi|13278367|gb|AAH04000.1| Rbm39 protein [Mus musculus]
Length = 429
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 165/459 (35%), Positives = 226/459 (49%), Gaps = 93/459 (20%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 32 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 91
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V + L
Sbjct: 92 SKGIA---------------------YVEFVDVSSVPLAIGL------------------ 112
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 113 -----------------TGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 149
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 150 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 209
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 210 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 265
Query: 496 TGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAA 547
TG+ A ++GSL S V L Q A + +A
Sbjct: 266 TGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRL---SQQTEASALAAAASVQPLA- 321
Query: 548 EFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYL 606
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY+
Sbjct: 322 ------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYV 375
Query: 607 RFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 376 KCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 414
>gi|395863338|ref|XP_003803853.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Otolemur
garnettii]
gi|395863342|ref|XP_003803855.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Otolemur
garnettii]
Length = 487
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 189/571 (33%), Positives = 269/571 (47%), Gaps = 136/571 (23%)
Query: 106 ERDRERSRERREKEKERERRE-RRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRR 164
+R +SR R ++ K R+E +R R++ER+R R ER+ S R S+SR R R
Sbjct: 7 KRGESKSRSRTDEPKRSRRKEGKRSRDRERKRSRSPERKRSRSKERRRSRSRSRDGRFRG 66
Query: 165 ERERESERERELELERERERERELRERERDLEMRESRR-YKEKKEVVEPEADPERDQRTV 223
R + ++R + L +R+ + +E + + PE ERD RTV
Sbjct: 67 RYTSPYSRPK---------FNSDIRG-QTGLPLRKDKSPVREPIDNLTPE---ERDARTV 113
Query: 224 FAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLIN 283
F Q+ + RD+ FFS GKVRDVR+I DRN+RRSKG+
Sbjct: 114 FCMQLAARIRPRDLEAFFSTVGKVRDVRMISDRNARRSKGI------------------- 154
Query: 284 SCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLL 343
++F V+ V P+AI L+GQ +
Sbjct: 155 --AYVEFVDVSSV-----------------------------------PLAIGLTGQRVF 177
Query: 344 GQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPF 401
G P++V+ S+AEKN +N G A GP +LYVG+LH N+TE LR +FEPF
Sbjct: 178 GVPILVRASQAEKNRAAAMANNLQKGRA-GPM-----RLYVGSLHLNITEAMLRGIFEPF 231
Query: 402 GPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGT 461
G +E +QL D ETG+ KG+GF+ F+ E AK A LNG LE+ GR +KV VT+ GT
Sbjct: 232 GRLESIQLMKDSETGRSKGYGFITFSDSECAKKALEQLNG-LELAGRPMKVGHVTE--GT 288
Query: 462 QDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLG-VAPAVNGSAVNQQ 520
+ A S F + D +L+RTGI AG L +A G+
Sbjct: 289 DASTASS--FLNSD----------------ELERTGIDLGTAGGLQFMARLAEGT----- 325
Query: 521 AISLPVVGQPAVPVPAVTAPVIPNMAAEFI-------------------------GSPSE 555
+ +P Q A+ + +P+ AEF ++
Sbjct: 326 GLQIPPAAQQAL---QMNSPLAFGATAEFSFRLDLLTRLSQQTQASDLAAAASVQPLATQ 382
Query: 556 CLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAA 614
C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S AA
Sbjct: 383 CFQLSNMFNPQTE-EVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAA 441
Query: 615 ASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+A A+H RWFA ++I+A ++ Y F
Sbjct: 442 VAAVSALHGRWFAGKMITAAYVPLPTYHNLF 472
>gi|291245052|ref|XP_002742405.1| PREDICTED: MGC81970 protein-like isoform 2 [Saccoglossus
kowalevskii]
Length = 444
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 165/477 (34%), Positives = 226/477 (47%), Gaps = 111/477 (23%)
Query: 203 YKEKKEVVEPEADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRS 261
Y K+ P+ PE RD RTVF +Q+ K RD+ EFFS G VRDVRLI DRNSRRS
Sbjct: 28 YGPSKKKDLPDLPPEERDARTVFCWQLSQKIRPRDMEEFFSSVGIVRDVRLISDRNSRRS 87
Query: 262 KGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYR 321
KG+ A + D N+ V + L G +
Sbjct: 88 KGI--AYVEFQDKNS-------------------VPLALGLSGQK--------------- 111
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN-LVQSNTSAGGTATGPYGAIDRKL 380
++S+P+ MV+ S+AEKN Q++ + +GP +L
Sbjct: 112 ------LLSIPI--------------MVQASQAEKNRAAQNSQNLQKGNSGP-----MRL 146
Query: 381 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 440
YVG+LHFN+TE LR +FEPFG ++ +QL D ETG+ KG+GF+ F E AK A LN
Sbjct: 147 YVGSLHFNITEEMLRGIFEPFGKIDNIQLMKDNETGRSKGYGFITFHDAEDAKKALEQLN 206
Query: 441 GKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DRTG 497
G E+ GR +KV VT+ D A ++ D DD G+ L R LM KL + TG
Sbjct: 207 G-FELAGRPMKVGHVTER---SDAATDASFLDSDDLERSGIDLGTTGRLQLMAKLAEGTG 262
Query: 498 IATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVI--------------- 542
PA +A+N A LP +G P +P +
Sbjct: 263 FQV---------PAAAAAALNPLA-GLPGIGLPVLPGTTPPQVMPPQPVNLQASLAAAQQ 312
Query: 543 -------------PNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYG 589
P ++ I +P C +L NMFDP ET +D EIQ DV EEC+K+G
Sbjct: 313 QAQQQAAALHQPPPTVSMPSIATP--CFMLSNMFDPTNETSSGWDREIQDDVIEECNKHG 370
Query: 590 RVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
HIYVDK + G VY++ + + A A A+H RWFA ++I+A ++ +Y A F
Sbjct: 371 GCVHIYVDKTNPLGVVYVKCATVQIAQMAVNALHGRWFAGKMITAAYVPLANYHALF 427
>gi|393910287|gb|EFO25730.2| hypothetical protein LOAG_02757 [Loa loa]
Length = 526
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 146/431 (33%), Positives = 207/431 (48%), Gaps = 83/431 (19%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNT 276
ERDQRTVF Q+ + RD+ EFFS G VRDVR+I D +RRSKG+
Sbjct: 149 ERDQRTVFILQIAKETRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGI------------ 196
Query: 277 LHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIA 336
C V EF+++ SV +A+A
Sbjct: 197 --------CYV------------------------------------EFWEIESVNLALA 212
Query: 337 LSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID-RKLYVGNLHFNMTETQLR 395
L+GQ LLG P++++P+ AE+N +NT G GP KLYVG LH ++TE L
Sbjct: 213 LNGQKLLGAPLVIQPTLAERNRAANNTVGGTLGFGPTNTTGPLKLYVGQLHTSITEDMLG 272
Query: 396 KLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSV 455
++F+PFG +E +++ D+ +G KG+ +V F + K A +NG E+ GR +KV SV
Sbjct: 273 RIFDPFGKIENLEIATDL-SGVSKGYAYVTFRHADDGKRAMEQMNG-FELAGRPMKVCSV 330
Query: 456 TDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGS 515
++ D DD D G+ L R LM KL G + S A
Sbjct: 331 EGDELPPPVPQRTLDTDDADRRGIDLGTSGRLHLMAKLAE-GSGLELPKS-----AKEIL 384
Query: 516 AVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDL 575
A NQQ + T P IP +A ++C +L NMFDP+ ET +
Sbjct: 385 AQNQQQLE----------SATATGPAIPPIA-------TQCFMLSNMFDPSQETGETWAD 427
Query: 576 EIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAI 634
E++ DV EEC+K G V HI+VDK S G VY++ S AA + A+H RWF+ ++I+A
Sbjct: 428 EVRDDVIEECAKNGGVLHIFVDKASPNGNVYVKCPSVAAAFKSVNALHGRWFSGKVITAN 487
Query: 635 FMKPEDYEAKF 645
++ Y F
Sbjct: 488 YVPVASYSQLF 498
>gi|59858555|ref|NP_001012304.1| RNA-binding protein 39 [Danio rerio]
gi|27882534|gb|AAH44487.1| RNA binding motif protein 39a [Danio rerio]
gi|182892014|gb|AAI65689.1| Rbm39a protein [Danio rerio]
Length = 523
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/330 (40%), Positives = 184/330 (55%), Gaps = 21/330 (6%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 379
YIEF D SVP+AI LSGQ LLG P++V+ S+AEKN +N G+A GP +
Sbjct: 194 YIEFVDSTSVPLAIGLSGQRLLGVPIIVQASQAEKNRAAALANNLQKGSA-GPM-----R 247
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG ++ +QL +D ETG+ KG+GF+ F+ E AK A L
Sbjct: 248 LYVGSLHFNITEDMLRGIFEPFGRIDSIQLMMDSETGRSKGYGFITFSDAECAKKALEQL 307
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGI 498
NG E+ GR +KV VT+ TA+ D D+ + G+ L R LM +L + TG+
Sbjct: 308 NG-FELAGRPMKVGHVTERTDAS-TASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGL 365
Query: 499 ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSP--SEC 556
A A+ S + P + + V N A P + C
Sbjct: 366 QIPPAAQQ----ALQMSGSMVAMAAATAAMNPGL---SFNINVPTNQALNLPSQPIATHC 418
Query: 557 LLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAA 615
L NMF+P E D +++EIQ DV EEC+K+G V HIYVDK+SA G VY++ + AA
Sbjct: 419 FQLSNMFNPNSENDHGWEIEIQDDVIEECNKHGGVIHIYVDKKSAEGNVYVKCPTIPAAM 478
Query: 616 SAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+A A+H RWF ++I+A ++ Y F
Sbjct: 479 AAVSALHGRWFGGKMITAAYVPLPTYHNLF 508
>gi|62857615|ref|NP_001016788.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|62201342|gb|AAH93451.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|89273890|emb|CAJ83908.1| RNA-binding region (RNP1, RRM) containing 2 [Xenopus (Silurana)
tropicalis]
Length = 542
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/348 (37%), Positives = 192/348 (55%), Gaps = 43/348 (12%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 379
Y+EF D SVP+AI L+GQ +LG P++V+ S+AEKN +N GTA GP +
Sbjct: 199 YVEFVDQSSVPLAIGLTGQKVLGVPIIVQASQAEKNRAAAMANNLQKGTA-GPM-----R 252
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A L
Sbjct: 253 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 312
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGI 498
NG E+ GR +KV VT+ + A+ D D+ + G+ L R LM +L + TG+
Sbjct: 313 NG-FELAGRPMKVGHVTERTDASN-ASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGL 370
Query: 499 --------ATSIAGSLGVAPAVNGSA-VNQQA-----------ISLPVVGQPAVPVPAVT 538
A ++GSL + ++QQ+ +P+PA T
Sbjct: 371 QIPPAAQQALQMSGSLAFGAVADLQTRISQQSEALAAAAASAATISLAAASSTLPIPATT 430
Query: 539 APVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDK 598
P+ ++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK
Sbjct: 431 QPIA-----------TQCFQLSNMFNPQTEDELGWDSEIKEDVIEECNKHGGVVHIYVDK 479
Query: 599 RSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
S G VY++ + +A +A A+H RWFA ++I+A ++ Y + F
Sbjct: 480 NSPQGNVYVKCPTIASAIAAVNALHGRWFAGKMITAAYVPLPTYHSLF 527
>gi|148226721|ref|NP_001086950.1| RNA binding motif protein 39 [Xenopus laevis]
gi|50414893|gb|AAH77813.1| Rnpc2-prov protein [Xenopus laevis]
Length = 540
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 132/348 (37%), Positives = 195/348 (56%), Gaps = 43/348 (12%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 379
Y+EF D SVP+AI L+GQ +LG P++V+ S+AEKN +N GTA GP +
Sbjct: 197 YVEFLDQSSVPLAIGLTGQKVLGVPIIVQASQAEKNRAAALANNLQKGTA-GPM-----R 250
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A L
Sbjct: 251 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 310
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGI 498
NG E+ GR +KV VT+ + A+ D D+ + G+ L R LM +L + TG+
Sbjct: 311 NG-FELAGRPMKVGHVTERTDASN-ASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGL 368
Query: 499 --------ATSIAGSLGVAPAVNGSA-VNQQA-----------ISLPVVGQPAVPVPAVT 538
A ++GSL + ++QQ+ + + +P+PA T
Sbjct: 369 QIPPAAQQALQMSGSLAFGAVADLQTRISQQSEALAAAAAAASAASITLASATLPIPATT 428
Query: 539 APVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDK 598
P+ ++C L NMF+P E + +D EI+ DV EEC+K+G V H+YVDK
Sbjct: 429 QPIA-----------TQCFQLSNMFNPQTEDELGWDSEIKEDVIEECNKHGGVVHLYVDK 477
Query: 599 RSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
SA G VY++ + +A +A A+H RWFA ++I+A ++ Y + F
Sbjct: 478 NSAQGNVYVKCPTIASAIAAVNALHGRWFAGKMITAAYVPLPTYHSLF 525
>gi|255082273|ref|XP_002508355.1| predicted protein [Micromonas sp. RCC299]
gi|226523631|gb|ACO69613.1| predicted protein [Micromonas sp. RCC299]
Length = 518
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 141/357 (39%), Positives = 196/357 (54%), Gaps = 54/357 (15%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA-------GGTATGP-- 372
YIEF D ++ A+AL+GQ+L Q VMVK SEAEKN+ A AT P
Sbjct: 181 YIEFADKANITDALALTGQMLRNQVVMVKASEAEKNIAWEAEQAQKKLEMKALGATDPAS 240
Query: 373 ---------YGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGF 423
+G KL V L N+ ET L+ +FEPFG + + + D TG+ +G GF
Sbjct: 241 AAAAVNAQAHGNGPCKLQVHGLDVNIGETDLKAVFEPFGETDFISIQRD-STGRSRGVGF 299
Query: 424 VQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDD--DDGGGLAL 481
VQ+ Q +HA A S LNG LE+VG++LKV+ T + A ++ D D+ G+ L
Sbjct: 300 VQYKQTQHAVLAISQLNG-LELVGQSLKVTMAPIAASTLNAAQAASMVTDKIDEQEGVRL 358
Query: 482 NAQSRALLMQKL---DRTGIATSIAG---SLGVAPAVNGSAVNQQAISLP-------VVG 528
+++SRA LM KL D T A G G+ + A Q+A + V+G
Sbjct: 359 DSRSRAALMAKLAGQDETQGALYSGGIDPKTGLPVSAEEMAAAQRAAHMTEVEFAQGVLG 418
Query: 529 QPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKY 588
PA P+P ++CLLLKNMFDPA ET+P++ ++I DV++ECSK+
Sbjct: 419 -PASPIP------------------TQCLLLKNMFDPAEETEPEWWIDIGEDVKDECSKH 459
Query: 589 GRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
G V HI+VDK S GFVYL+F STE A++A++A+H RWFA ++I+A F Y F
Sbjct: 460 GPVSHIHVDKESRGFVYLKFGSTEGASAARQALHGRWFAGKMIAAEFQFVPVYNKHF 516
>gi|195397963|ref|XP_002057597.1| GJ18017 [Drosophila virilis]
gi|194141251|gb|EDW57670.1| GJ18017 [Drosophila virilis]
Length = 599
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 127/327 (38%), Positives = 180/327 (55%), Gaps = 36/327 (11%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA--GGTATGPYGAIDRK 379
YIEF D SV +A+ LSGQ LLG P+MV+ ++AEKN +QS TGP +
Sbjct: 287 YIEFEDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQSAPPPFQPKAHTGPM-----R 341
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG ++++QL +D ETG+ KG+GF+ + + AK A L
Sbjct: 342 LYVGSLHFNITEDMLRGIFEPFGKIDVIQLIMDTETGRSKGYGFITYHNADDAKKALEQL 401
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIA 499
NG E+ GR +KV +VT+ + D S D D+ D G+ L A R LM KL
Sbjct: 402 NG-FELAGRPMKVGNVTERL---DMNTSSLDTDEMDRSGIDLGATGRLQLMFKL------ 451
Query: 500 TSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLL 559
A G+A + P Q P++ ++C +L
Sbjct: 452 ---AEGAGLAVPQAAANALLATAPQPAPLQQQQQTPSIA---------------TQCFIL 493
Query: 560 KNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQ 618
NMFDP ET+P +D +++ DV +EC+K+G V HI+VD S G VY++ ST A A
Sbjct: 494 SNMFDPRTETNPTWDTDVREDVLDECAKHGGVLHIHVDTVSPTGTVYVKCPSTTTAVLAV 553
Query: 619 RAMHMRWFARRLISAIFMKPEDYEAKF 645
A+H RWFA R+I+A ++ +Y + F
Sbjct: 554 NALHGRWFAGRVITAAYVPVINYHSMF 580
>gi|291245050|ref|XP_002742404.1| PREDICTED: MGC81970 protein-like isoform 1 [Saccoglossus
kowalevskii]
Length = 556
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/357 (38%), Positives = 187/357 (52%), Gaps = 54/357 (15%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN-LVQSNTSAGGTATGPYGAIDRKL 380
Y+EF D SVP+A+ LSGQ LL P+MV+ S+AEKN Q++ + +GP +L
Sbjct: 204 YVEFQDKNSVPLALGLSGQKLLSIPIMVQASQAEKNRAAQNSQNLQKGNSGPM-----RL 258
Query: 381 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 440
YVG+LHFN+TE LR +FEPFG ++ +QL D ETG+ KG+GF+ F E AK A LN
Sbjct: 259 YVGSLHFNITEEMLRGIFEPFGKIDNIQLMKDNETGRSKGYGFITFHDAEDAKKALEQLN 318
Query: 441 GKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DRTG 497
G E+ GR +KV VT+ D A ++ D DD G+ L R LM KL + TG
Sbjct: 319 G-FELAGRPMKVGHVTER---SDAATDASFLDSDDLERSGIDLGTTGRLQLMAKLAEGTG 374
Query: 498 IATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVI--------------- 542
PA +A+N A LP +G P +P +
Sbjct: 375 FQV---------PAAAAAALNPLA-GLPGIGLPVLPGTTPPQVMPPQPVNLQASLAAAQQ 424
Query: 543 -------------PNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYG 589
P ++ I +P C +L NMFDP ET +D EIQ DV EEC+K+G
Sbjct: 425 QAQQQAAALHQPPPTVSMPSIATP--CFMLSNMFDPTNETSSGWDREIQDDVIEECNKHG 482
Query: 590 RVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
HIYVDK + G VY++ + + A A A+H RWFA ++I+A ++ +Y A F
Sbjct: 483 GCVHIYVDKTNPLGVVYVKCATVQIAQMAVNALHGRWFAGKMITAAYVPLANYHALF 539
>gi|312070862|ref|XP_003138342.1| hypothetical protein LOAG_02757 [Loa loa]
Length = 648
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 144/431 (33%), Positives = 207/431 (48%), Gaps = 83/431 (19%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNT 276
ERDQRTVF Q+ + RD+ EFFS G VRDVR+I D +RRSKG+
Sbjct: 271 ERDQRTVFILQIAKETRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGI------------ 318
Query: 277 LHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIA 336
C ++F +++ SV +A+A
Sbjct: 319 ---------CYVEF-----------------------------------WEIESVNLALA 334
Query: 337 LSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID-RKLYVGNLHFNMTETQLR 395
L+GQ LLG P++++P+ AE+N +NT G GP KLYVG LH ++TE L
Sbjct: 335 LNGQKLLGAPLVIQPTLAERNRAANNTVGGTLGFGPTNTTGPLKLYVGQLHTSITEDMLG 394
Query: 396 KLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSV 455
++F+PFG +E +++ D+ +G KG+ +V F + K A +NG E+ GR +KV SV
Sbjct: 395 RIFDPFGKIENLEIATDL-SGVSKGYAYVTFRHADDGKRAMEQMNG-FELAGRPMKVCSV 452
Query: 456 TDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGS 515
++ D DD D G+ L R LM KL G + S A
Sbjct: 453 EGDELPPPVPQRTLDTDDADRRGIDLGTSGRLHLMAKLAE-GSGLELPKS-----AKEIL 506
Query: 516 AVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDL 575
A NQQ + T P IP +A ++C +L NMFDP+ ET +
Sbjct: 507 AQNQQQLE----------SATATGPAIPPIA-------TQCFMLSNMFDPSQETGETWAD 549
Query: 576 EIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAI 634
E++ DV EEC+K G V HI+VDK S G VY++ S AA + A+H RWF+ ++I+A
Sbjct: 550 EVRDDVIEECAKNGGVLHIFVDKASPNGNVYVKCPSVAAAFKSVNALHGRWFSGKVITAN 609
Query: 635 FMKPEDYEAKF 645
++ Y F
Sbjct: 610 YVPVASYSQLF 620
>gi|195434196|ref|XP_002065089.1| GK15272 [Drosophila willistoni]
gi|194161174|gb|EDW76075.1| GK15272 [Drosophila willistoni]
Length = 612
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 131/327 (40%), Positives = 179/327 (54%), Gaps = 36/327 (11%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA--GGTATGPYGAIDRK 379
YIEF D SV +A+ LSGQ LLG P+MV+ ++AEKN +Q+ A + TGP +
Sbjct: 300 YIEFEDPESVSLALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHTGPM-----R 354
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG ++++QL +D ETG+ KG+GF+ + + AK A L
Sbjct: 355 LYVGSLHFNITEDMLRGIFEPFGKIDVIQLIMDTETGRSKGYGFITYHNADDAKKALEQL 414
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIA 499
NG E+ GR +KV +VT+ + D S D D+ D G+ L A R LM KL
Sbjct: 415 NG-FELAGRPMKVGNVTERL---DMNTTSLDTDEMDRTGIDLGATGRLQLMFKLAEGA-- 468
Query: 500 TSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLL 559
G AV Q A + + P FI L
Sbjct: 469 --------------GLAVPQAAANALLATAPQPAPVQQQQQTPSIATQCFI--------L 506
Query: 560 KNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQ 618
NMFDPA ET+ +D EI+ DV EEC+K+G V HI+VD S+ G VY++ ST A A
Sbjct: 507 SNMFDPATETNTTWDSEIRDDVLEECAKHGGVLHIHVDTASSTGTVYVKCPSTTTAVLAV 566
Query: 619 RAMHMRWFARRLISAIFMKPEDYEAKF 645
A+H RWFA R+I+A ++ +Y + F
Sbjct: 567 NALHGRWFAGRVITAAYVPLINYHSMF 593
>gi|184185564|gb|ACC68962.1| RNA binding motif protein 39 isoform a (predicted) [Rhinolophus
ferrumequinum]
Length = 498
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 158/436 (36%), Positives = 215/436 (49%), Gaps = 95/436 (21%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 193 SKGIA---------------------YVEFVDVSSV------------------------ 207
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
P+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 208 -----------PLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 250
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 251 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 310
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 311 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 366
Query: 496 TGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVIPNMA 546
TG+ A ++GSL S V I L + Q A + +A
Sbjct: 367 TGLQIPPAAQQALQMSGSLAFGAVAEFSFV----IDLQTRLSQQTEASALAAAASVQPLA 422
Query: 547 AEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVY 605
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY
Sbjct: 423 -------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVY 475
Query: 606 LRFESTEAAASAQRAM 621
++ S AA + +
Sbjct: 476 VKCPSIAAAHCCCQCI 491
>gi|417411155|gb|JAA52027.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 491
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 132/330 (40%), Positives = 186/330 (56%), Gaps = 24/330 (7%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 379
Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP +
Sbjct: 165 YVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM-----R 218
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A L
Sbjct: 219 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 278
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DRT 496
NG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L + T
Sbjct: 279 NG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGT 334
Query: 497 GIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSEC 556
G L + PA + +++ V + T AA ++C
Sbjct: 335 G--------LQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLATQC 386
Query: 557 LLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAA 615
L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S AA
Sbjct: 387 FQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAI 446
Query: 616 SAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+A A+H RWFA ++I+A ++ Y F
Sbjct: 447 AAVNALHGRWFAGKMITAAYVPLPTYHNLF 476
>gi|426241410|ref|XP_004014584.1| PREDICTED: RNA-binding protein 39 isoform 5 [Ovis aries]
Length = 530
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 132/330 (40%), Positives = 186/330 (56%), Gaps = 24/330 (7%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 379
Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP +
Sbjct: 204 YVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM-----R 257
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A L
Sbjct: 258 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 317
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DRT 496
NG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L + T
Sbjct: 318 NG-FELTGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGT 373
Query: 497 GIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSEC 556
G L + PA + +++ V + T AA ++C
Sbjct: 374 G--------LQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLATQC 425
Query: 557 LLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAA 615
L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S AA
Sbjct: 426 FQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAI 485
Query: 616 SAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+A A+H RWFA ++I+A ++ Y F
Sbjct: 486 AAVNALHGRWFAGKMITAAYVPLPTYHNLF 515
>gi|88682991|gb|AAI05542.1| RBM39 protein [Bos taurus]
Length = 528
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 132/330 (40%), Positives = 186/330 (56%), Gaps = 24/330 (7%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 379
Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP +
Sbjct: 202 YVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM-----R 255
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A L
Sbjct: 256 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 315
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DRT 496
NG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L + T
Sbjct: 316 NG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGT 371
Query: 497 GIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSEC 556
G L + PA + +++ V + T AA ++C
Sbjct: 372 G--------LQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLATQC 423
Query: 557 LLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAA 615
L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S AA
Sbjct: 424 FQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAI 483
Query: 616 SAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+A A+H RWFA ++I+A ++ Y F
Sbjct: 484 AAVNALHGRWFAGKMITAAYVPLPTYHNLF 513
>gi|330688445|ref|NP_001193433.1| RNA-binding protein 39 [Bos taurus]
Length = 530
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 132/330 (40%), Positives = 186/330 (56%), Gaps = 24/330 (7%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 379
Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP +
Sbjct: 204 YVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM-----R 257
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A L
Sbjct: 258 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 317
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DRT 496
NG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L + T
Sbjct: 318 NG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGT 373
Query: 497 GIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSEC 556
G L + PA + +++ V + T AA ++C
Sbjct: 374 G--------LQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLATQC 425
Query: 557 LLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAA 615
L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S AA
Sbjct: 426 FQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAI 485
Query: 616 SAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+A A+H RWFA ++I+A ++ Y F
Sbjct: 486 AAVNALHGRWFAGKMITAAYVPLPTYHNLF 515
>gi|148674239|gb|EDL06186.1| RNA binding motif protein 39, isoform CRA_d [Mus musculus]
Length = 507
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 132/330 (40%), Positives = 186/330 (56%), Gaps = 24/330 (7%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 379
Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP +
Sbjct: 181 YVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM-----R 234
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A L
Sbjct: 235 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 294
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DRT 496
NG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L + T
Sbjct: 295 NG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGT 350
Query: 497 GIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSEC 556
G L + PA + +++ V + T AA ++C
Sbjct: 351 G--------LQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLATQC 402
Query: 557 LLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAA 615
L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S AA
Sbjct: 403 FQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAI 462
Query: 616 SAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+A A+H RWFA ++I+A ++ Y F
Sbjct: 463 AAVNALHGRWFAGKMITAAYVPLPTYHNLF 492
>gi|417411216|gb|JAA52053.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 499
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 136/339 (40%), Positives = 190/339 (56%), Gaps = 36/339 (10%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 379
Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP +
Sbjct: 167 YVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM-----R 220
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A L
Sbjct: 221 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 280
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DRT 496
NG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L + T
Sbjct: 281 NG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGT 336
Query: 497 GI--------ATSIAGSLGVAPAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVIPNMAA 547
G+ A ++GSL S V I L + Q A + +A
Sbjct: 337 GLQIPPAAQQALQMSGSLAFGAVAEFSFV----IDLQTRLSQQTEASALAAAASVQPLA- 391
Query: 548 EFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYL 606
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY+
Sbjct: 392 ------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYV 445
Query: 607 RFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 446 KCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 484
>gi|432858816|ref|XP_004068953.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Oryzias latipes]
Length = 529
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 136/336 (40%), Positives = 193/336 (57%), Gaps = 32/336 (9%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
YIEF + SVP+AI L+GQ LLG P++V+ S+AEKN + +A G G + +LY
Sbjct: 198 YIEFVEASSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAAAANNLQRGLTGPM--RLY 255
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A LNG
Sbjct: 256 VGSLHFNITEDMLRGIFEPFGRIENIQLMMDSETGRSKGYGFITFSDAECAKKALEQLNG 315
Query: 442 KLEIVGRTLKVSSVTDHVGTQDTAAKSA-DFDDDDGGGLALNAQSRALLMQKL-DRTGIA 499
E+ GR +KV VT+ T ++A S D D+ + G+ L R LM +L + TG
Sbjct: 316 -FELAGRPMKVGHVTER--TDPSSAPSILDNDELERSGIDLGTTGRLQLMARLAEGTG-- 370
Query: 500 TSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIP----NMAAEFIGSPSE 555
L + PA QQA+ + + AV+A + P NM + + PS+
Sbjct: 371 ------LQIPPAA------QQALQMSGAIA-IGAMAAVSAAMNPSLNVNMNSGALNLPSQ 417
Query: 556 -----CLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFE 609
C L NMF+P+ E ++++IQ DV EEC+K+G V HIYVDK SA G VY++
Sbjct: 418 PLATHCFQLSNMFNPSSENTFGWEVDIQRDVIEECNKHGGVVHIYVDKNSAEGNVYVKCP 477
Query: 610 STEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
S AA SA A+H R+F ++I+A ++ Y F
Sbjct: 478 SIPAAMSAVNALHGRFFGGKMITAAYVPLPTYHKLF 513
>gi|403412344|emb|CCL99044.1| predicted protein [Fibroporia radiculosa]
Length = 599
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/319 (37%), Positives = 178/319 (55%), Gaps = 48/319 (15%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQ---SNTSAGGTATGPYGAIDR 378
Y+EF V V A+ LSG +++G P+ ++ +EAE+N + N + + P+G +
Sbjct: 316 YVEFRSVELVDKALGLSGTVVMGLPIQIQHTEAERNRLHPGDGNLNLPPGVSAPHGGM-- 373
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE+ ++++FEPFG +E V L D TG+ KG+ FVQ+ + E A+ A
Sbjct: 374 QLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDARMALEQ 433
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGI 498
+ G E+ GRTL+V++V + T+ S D+ GG LNA SR LMQKL RT
Sbjct: 434 MEG-FELAGRTLRVNTVHEKGTTKYAQQDSL----DEAGGGNLNAASRQALMQKLART-- 486
Query: 499 ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLL 558
QPAV +P VT P IP S +L
Sbjct: 487 -----------------------------DQPAVKLPPVTKPNIPQSMQ------SRSVL 511
Query: 559 LKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASA 617
LKNMF+P ET+ D+D ++ DV+ EC KYG+V+ I V++ S G +Y++F+S E+A +A
Sbjct: 512 LKNMFNPEEETERDWDKDLAEDVKGECEDKYGKVEFIKVERESQGEIYVKFDSIESAKNA 571
Query: 618 QRAMHMRWFARRLISAIFM 636
+ +H RWF +SA F+
Sbjct: 572 IQGLHGRWFGGNQVSAAFI 590
>gi|52545994|emb|CAH18281.2| hypothetical protein [Homo sapiens]
Length = 513
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 136/339 (40%), Positives = 190/339 (56%), Gaps = 36/339 (10%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 379
Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP +
Sbjct: 181 YVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM-----R 234
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A L
Sbjct: 235 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 294
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DRT 496
NG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L + T
Sbjct: 295 NG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGT 350
Query: 497 GI--------ATSIAGSLGVAPAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVIPNMAA 547
G+ A ++GSL S V I L + Q A + +A
Sbjct: 351 GLQIPPAAQQALQMSGSLAFGAVAEFSFV----IDLQTRLSQQTEASALAAAASVQPLA- 405
Query: 548 EFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYL 606
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY+
Sbjct: 406 ------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYV 459
Query: 607 RFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 460 KCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 498
>gi|47212427|emb|CAF93583.1| unnamed protein product [Tetraodon nigroviridis]
Length = 500
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 130/337 (38%), Positives = 183/337 (54%), Gaps = 38/337 (11%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN---------LVQSNTSAGGTATGP 372
YIEF + SVP+AI L+GQ LLG P++V+ S+AEKN +N G GP
Sbjct: 173 YIEFVEASSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAAAAAAAANNLQKG--MMGP 230
Query: 373 YGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHA 432
+LYVG+LHFN+TE LR +FEPFG +E +QL +D +TG+ KG+GF+ FA E A
Sbjct: 231 L-----RLYVGSLHFNITEEMLRGIFEPFGRIENIQLMVDSDTGRSKGYGFITFADAECA 285
Query: 433 KAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
K A LNG E+ GR +KV VTD + A D ++ + G L + R LM +
Sbjct: 286 KKALEQLNG-FELAGRPMKVGHVTDR--SDAVAPPFPDGEEQERAGADLGSTGRLQLMAQ 342
Query: 493 L-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIG 551
L + TG L + P+ + AI+L + AV+A + P +
Sbjct: 343 LSEGTG--------LPMPPSAQQALQMSGAIALGAMA-------AVSAAMNPGLNMSIPS 387
Query: 552 SP--SECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRF 608
P + C L NMF P E P ++L+IQ +V EEC+K+G V HIYVDK SA G VY++
Sbjct: 388 QPLATHCFQLSNMFSPNSELPPGWELDIQHNVIEECNKHGGVVHIYVDKDSAEGNVYIKC 447
Query: 609 ESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+ AA +A +H R+F +LI+A ++ Y F
Sbjct: 448 PTIPAAMAAVNVLHGRFFNGKLITAAYVPLPTYHNLF 484
>gi|296199709|ref|XP_002747282.1| PREDICTED: RNA-binding protein 39 isoform 5 [Callithrix jacchus]
Length = 504
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/338 (39%), Positives = 188/338 (55%), Gaps = 34/338 (10%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 379
Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP +
Sbjct: 172 YVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM-----R 225
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A L
Sbjct: 226 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 285
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DRT 496
NG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L + T
Sbjct: 286 NG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGT 341
Query: 497 GI--------ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAE 548
G+ A ++GSL S V L Q A + +A
Sbjct: 342 GLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRL---SQQTEASALAAAASVQPLA-- 396
Query: 549 FIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLR 607
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++
Sbjct: 397 -----TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVK 451
Query: 608 FESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 452 CPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 489
>gi|405963791|gb|EKC29337.1| RNA-binding protein 39 [Crassostrea gigas]
Length = 557
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 132/329 (40%), Positives = 190/329 (57%), Gaps = 18/329 (5%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF D SVP+AI L+ Q LLG P++V+ S+AEKN V + TS G G + +LY
Sbjct: 208 YVEFQDTDSVPLAIGLTNQKLLGVPIIVQHSQAEKNRVGNPTSI--LTKGNIGPM--RLY 263
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VG+LHFN+TE LR +FEPFG ++ ++L D ET + +G+GF+ F E AK A LNG
Sbjct: 264 VGSLHFNITEEMLRGIFEPFGKIDDIKLIRDHETNRSQGYGFITFHDSEDAKKALEQLNG 323
Query: 442 KLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIAT 500
E+ GR +KV VT+ G + A D D+ D G+ L A R LM KL + TG
Sbjct: 324 -FELAGRPMKVGHVTERQG-EIQGASMLDSDEMDRAGIDLGATGRLQLMAKLAEGTGFQI 381
Query: 501 SIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSP---SECL 557
AV+ + QQA + PA P P V+A + A + +P ++C
Sbjct: 382 P-------EYAVSALNITQQAPGVASAAPPAGPAPNVSAILGSQAAGQDNTAPPIATQCF 434
Query: 558 LLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAAS 616
+L NMFDP E+ +D EI+ DV EEC+K+G V H+YVDK S G VY++ + AA +
Sbjct: 435 MLSNMFDPNAESRSSWDQEIRDDVIEECNKHGGVLHLYVDKASPQGNVYVKCPTISAAVA 494
Query: 617 AQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+ RA+H R+F ++I+A ++ +Y + F
Sbjct: 495 SVRALHGRYFGGKMITAAYVPLPNYHSLF 523
>gi|215820610|ref|NP_001135964.1| RNA binding motif protein 39 [Nasonia vitripennis]
Length = 516
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/328 (38%), Positives = 182/328 (55%), Gaps = 36/328 (10%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF D SV +A+ LSGQ LLG P++V+ ++AEKN + N+ G G + +LY
Sbjct: 202 YVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRM-GNSMPNLMPKGQTGPM--RLY 258
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VG+L FN+TE L+ +FEPFG +E +QL +D ETG+ KG+GF+ F + AK A LNG
Sbjct: 259 VGSLLFNITEEMLKGIFEPFGKIENIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNG 318
Query: 442 KLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTG--I 498
E+ GR +KV +VT+ D D+ D G+ L A R LM KL + TG I
Sbjct: 319 -FELAGRPMKVGNVTERTDLIQ-GPSLLDTDELDRSGIDLGATGRLQLMFKLAEGTGLEI 376
Query: 499 ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLL 558
+ A +L + P V +NQQ TAP I ++C +
Sbjct: 377 PPAAANALNMTPVVTAPQINQQ-----------------TAPPI----------ATQCFM 409
Query: 559 LKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASA 617
L NMFDP E + + EI+ DV EEC+K+G V H+YVD+ S G VY++ S A +A
Sbjct: 410 LSNMFDPQNENNSLWVKEIRDDVIEECNKHGGVLHVYVDQASPQGNVYVKCPSIATAVAA 469
Query: 618 QRAMHMRWFARRLISAIFMKPEDYEAKF 645
++H RWFA R+I+A ++ +Y + F
Sbjct: 470 VNSLHGRWFAGRVITAAYVPVVNYHSLF 497
>gi|170083917|ref|XP_001873182.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650734|gb|EDR14974.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 448
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 149/435 (34%), Positives = 216/435 (49%), Gaps = 113/435 (25%)
Query: 211 EPEADPERDQRTVFAYQMPLKATERDVYEFFSKA---GKVRDVRLIMDRNSRRSKGVGNA 267
EP+ D + + R+VF Q+ + T RD+ FF G V D R++ DR SRRSKG+G
Sbjct: 109 EPKED-DSEARSVFVSQLAARLTARDLGYFFEDKLGEGTVMDSRIVTDRLSRRSKGIG-- 165
Query: 268 IMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYD 327
V +R I+
Sbjct: 166 -------------------------------------------------YVEFRTID--- 173
Query: 328 VMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQS-----NTSAGGTATGPYGAIDRKLYV 382
V A+ALSG +++G P+MV+ +E+E+N + N G TA+ +GAI LYV
Sbjct: 174 --HVEKALALSGTVVMGLPIMVQLTESERNKLHPGDGSLNLPPGVTAS--HGAI---LYV 226
Query: 383 GNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGK 442
G+LHFN+TE+ ++++FEPFG +E V L D TG+ KG+ FVQ+ + E A+ A + G
Sbjct: 227 GSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRSEDARMALEQMEG- 285
Query: 443 LEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSI 502
E+ GRTL+V++V + + TA + D+ GG LNA SR LMQKL RT
Sbjct: 286 FELAGRTLRVNTVHE----KGTARYTQQDSLDEAGGGNLNAASRQALMQKLART------ 335
Query: 503 AGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNM 562
AP P +P V P IP S +LLKNM
Sbjct: 336 -----EAP--------------PTFTEP------VARPNIPQAMQ------SRSVLLKNM 364
Query: 563 FDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAM 621
FDP ET+ D+D E+ DV+ EC +KYG+V+ I V++ + G +YL+F+S E+A A + +
Sbjct: 365 FDPEEETERDWDKELADDVKVECENKYGKVEAIKVERETQGEIYLKFDSIESAKQAIQGL 424
Query: 622 HMRWFARRLISAIFM 636
+ RWF R +SA F+
Sbjct: 425 NGRWFGGRQVSAAFI 439
>gi|31873732|emb|CAD97833.1| hypothetical protein [Homo sapiens]
Length = 373
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 191/340 (56%), Gaps = 38/340 (11%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 379
Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP +
Sbjct: 41 YVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM-----R 94
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A L
Sbjct: 95 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 154
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG---GGLALNAQSRALLMQKL-DR 495
NG E+ GR +KV VT+ + A+ ++ F D DG G+ L R LM +L +
Sbjct: 155 NG-FELAGRPMKVGHVTE----RTDASSASSFLDSDGLERTGIDLGTTGRLQLMARLAEG 209
Query: 496 TGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVIPNMA 546
TG+ A ++GSL S V I L + Q A + +A
Sbjct: 210 TGLQIPPAAQQALQMSGSLAFGAVAEFSFV----IDLQTRLSQQTEASALAAAASVQPLA 265
Query: 547 AEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVY 605
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY
Sbjct: 266 -------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVY 318
Query: 606 LRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 319 VKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 358
>gi|403178034|ref|XP_003336468.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375173310|gb|EFP92049.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 185/578 (32%), Positives = 254/578 (43%), Gaps = 158/578 (27%)
Query: 121 ERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELER 180
ER+R +DREK+R R+RD +R SR R RSR + R R+L+ R
Sbjct: 213 ERDRERDKDREKDRARDRDPKRSHRSRDLDEDRDRHRKRPRSRSRERSKEPRPRDLD-GR 271
Query: 181 ERERERELRERERDLEMRESRRYKEKKEVVEPEADP------------ERDQRTVFAYQM 228
E ER+R E E + R R + EP P E + R+VF Q+
Sbjct: 272 ESERQRRFEEAEGEDRRRRPDRRSPRYRPYEPTGSPPRRSSSPHLTEEEHEMRSVFVSQL 331
Query: 229 PLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCV 287
+ +R++++FF +AGKVRD RLI DR SRRSKGVG
Sbjct: 332 SARVGDRELFQFFEQQAGKVRDARLITDRISRRSKGVG---------------------- 369
Query: 288 IKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPV 347
V +R +E SV A+AL+G LLG PV
Sbjct: 370 -----------------------------YVEFRELE-----SVQKALALTGTKLLGLPV 395
Query: 348 MVKPSEAEKN-----LVQSNTSAG----------------GTATGPYGAID----RKLYV 382
MV+ +EAEKN Q N G A GP G D +LYV
Sbjct: 396 MVQYTEAEKNRQAMANTQPNVPPGFVATAPPPPVPRPYVTPKARGP-GPNDPNSYARLYV 454
Query: 383 GNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGK 442
G+L+FN+T+ +R++F+PFG +E V L D TG+ KG+ FVQF + AK A +NG
Sbjct: 455 GSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFKNMHDAKNAMEKMNG- 513
Query: 443 LEIVGRTLKV---------------SSVTDHV-----GTQDTAAKSADFDD--DDGGGLA 480
++ GR L+V V + V G TA + F++ +D G
Sbjct: 514 FQLAGRALRVEIKAQPPAALLNATAPGVANPVIVTPSGGNFTAPAPSTFEERLEDPIGGN 573
Query: 481 LNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAP 540
LN SR LM KL RT T+ VPV + P
Sbjct: 574 LNQISRVELMHKLARTEQPTN------------------------------VPVTDMFRP 603
Query: 541 VIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKR 599
IP S +LLKNMF+P ET+ +D+E++ DV+ EC KYG V I ++K
Sbjct: 604 NIPTAT-------SRSVLLKNMFNPEEETEQGWDIELRDDVKGECEEKYGPVLAIAIEKE 656
Query: 600 S-AGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFM 636
S AG +Y+ F+S +A A ++ RWF R I+A F+
Sbjct: 657 STAGDIYITFDSVPSAQKAITGLNNRWFGGRQITAAFI 694
>gi|324507842|gb|ADY43315.1| RNA-binding protein 39 [Ascaris suum]
Length = 618
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 147/488 (30%), Positives = 228/488 (46%), Gaps = 120/488 (24%)
Query: 193 RDLEMRESRRYK----------------EKKEVV--------EPEA-----DPERDQRTV 223
R L+ R+ R + E+++V+ P A ERDQRTV
Sbjct: 193 RVLDHRDRRGFSPPWRRSPPRGPRLPGPERRDVMPFTARRSPPPNAKLDMTSEERDQRTV 252
Query: 224 FAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLIN 283
F Q+ + RD+ EFFS G VRDVR+I D +RRSKG+
Sbjct: 253 FILQIARQTRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGI------------------- 293
Query: 284 SCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLL 343
C ++F +++ SV +A+AL+GQ LL
Sbjct: 294 --CYVEF-----------------------------------WEIESVNLALALNGQKLL 316
Query: 344 GQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDR-KLYVGNLHFNMTETQLRKLFEPFG 402
G P++++P+ AE+N +NT G GP KLY+G LH ++TE LR++FEPFG
Sbjct: 317 GAPLVIQPTLAERNRAANNTVGGSLGFGPTNTTGPLKLYIGQLHTSITEDMLRRIFEPFG 376
Query: 403 PVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSV-TDHVGT 461
++ +++ D+ +G KG+ +V F + AK A +NG E+ GR +KV +V D V +
Sbjct: 377 KIDTLEIATDL-SGVSKGYAYVTFRHADDAKRAMEQMNG-FELAGRPMKVGTVDGDEVPS 434
Query: 462 QDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTG--IATSIAGSLGVAPAVNGSAVN 518
Q ++ D D+ D G+ L R LM KL + +G + S L +
Sbjct: 435 Q--PQRTLDTDEADRRGIDLGTSGRLHLMAKLAEGSGLELPKSAKDMLAQNQQQQQQTDS 492
Query: 519 QQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQ 578
Q +++P + ++C LL NMFDPA ET ++ E++
Sbjct: 493 SQNLAIPPIA-------------------------TQCFLLSNMFDPAQETGENWADEVR 527
Query: 579 GDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMK 637
DV EEC+K G V HI+VD+ S +G VY++ S AA + ++H RWF+ ++I+A ++
Sbjct: 528 DDVIEECAKNGGVVHIFVDRESPSGNVYVKCPSVAAAYKSVNSLHGRWFSGKVITANYIP 587
Query: 638 PEDYEAKF 645
Y F
Sbjct: 588 VASYSQLF 595
>gi|426241414|ref|XP_004014586.1| PREDICTED: RNA-binding protein 39 isoform 7 [Ovis aries]
Length = 367
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 132/330 (40%), Positives = 186/330 (56%), Gaps = 24/330 (7%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 379
Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP +
Sbjct: 41 YVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM-----R 94
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A L
Sbjct: 95 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 154
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DRT 496
NG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L + T
Sbjct: 155 NG-FELTGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGT 210
Query: 497 GIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSEC 556
G L + PA + +++ V + T AA ++C
Sbjct: 211 G--------LQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLATQC 262
Query: 557 LLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAA 615
L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S AA
Sbjct: 263 FQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAI 322
Query: 616 SAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+A A+H RWFA ++I+A ++ Y F
Sbjct: 323 AAVNALHGRWFAGKMITAAYVPLPTYHNLF 352
>gi|410055060|ref|XP_003953766.1| PREDICTED: uncharacterized protein LOC458443 [Pan troglodytes]
gi|426391517|ref|XP_004062119.1| PREDICTED: RNA-binding protein 39 isoform 6 [Gorilla gorilla
gorilla]
gi|20988961|gb|AAH30493.1| Rbm39 protein [Mus musculus]
gi|34364789|emb|CAE45833.1| hypothetical protein [Homo sapiens]
gi|111598490|gb|AAH82607.1| Rbm39 protein [Mus musculus]
gi|119596570|gb|EAW76164.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_d [Homo
sapiens]
gi|149030835|gb|EDL85862.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_g [Rattus
norvegicus]
Length = 367
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 132/330 (40%), Positives = 186/330 (56%), Gaps = 24/330 (7%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 379
Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP +
Sbjct: 41 YVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM-----R 94
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A L
Sbjct: 95 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 154
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DRT 496
NG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L + T
Sbjct: 155 NG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGT 210
Query: 497 GIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSEC 556
G L + PA + +++ V + T AA ++C
Sbjct: 211 G--------LQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLATQC 262
Query: 557 LLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAA 615
L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S AA
Sbjct: 263 FQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAI 322
Query: 616 SAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+A A+H RWFA ++I+A ++ Y F
Sbjct: 323 AAVNALHGRWFAGKMITAAYVPLPTYHNLF 352
>gi|403175151|ref|XP_003889057.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171476|gb|EHS64385.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 184/578 (31%), Positives = 254/578 (43%), Gaps = 158/578 (27%)
Query: 121 ERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELER 180
ER+R +DREK+R R+RD +R SR R RSR + R R+L+ R
Sbjct: 213 ERDRERDKDREKDRARDRDPKRSHRSRDLDEDRDRHRKRPRSRSRERSKEPRPRDLD-GR 271
Query: 181 ERERERELRERERDLEMRESRRYKEKKEVVEPEADP------------ERDQRTVFAYQM 228
E ER+R E + + R R + EP P E + R+VF Q+
Sbjct: 272 ESERQRRFEEADGEDRRRRPDRRSPRYRPYEPTGSPPRRSSSPHLTEEEHEMRSVFVSQL 331
Query: 229 PLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCV 287
+ +R++++FF +AGKVRD RLI DR SRRSKGVG
Sbjct: 332 SARVGDRELFQFFEQQAGKVRDARLITDRISRRSKGVG---------------------- 369
Query: 288 IKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPV 347
V +R +E SV A+AL+G LLG PV
Sbjct: 370 -----------------------------YVEFRELE-----SVQKALALTGTKLLGLPV 395
Query: 348 MVKPSEAEKN-----LVQSNTSAG----------------GTATGPYGAID----RKLYV 382
MV+ +EAEKN Q N G A GP G D +LYV
Sbjct: 396 MVQYTEAEKNRQAMANTQPNVPPGFVATAPPPPVPRPYVAPKARGP-GPNDPNSYARLYV 454
Query: 383 GNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGK 442
G+L+FN+T+ +R++F+PFG +E V L D TG+ KG+ FVQF + AK A +NG
Sbjct: 455 GSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFKNMHDAKNAMEKMNG- 513
Query: 443 LEIVGRTLKV---------------SSVTDHV-----GTQDTAAKSADFDD--DDGGGLA 480
++ GR L+V V + V G TA + F++ +D G
Sbjct: 514 FQLAGRALRVEIKAQPPAALLNATAPGVANPVIVTPSGGNFTAPAPSTFEERLEDPIGGN 573
Query: 481 LNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAP 540
LN SR LM KL RT T+ VPV + P
Sbjct: 574 LNQISRVELMHKLARTEQPTN------------------------------VPVTDMFRP 603
Query: 541 VIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKR 599
IP S +LLKNMF+P ET+ +D+E++ DV+ EC KYG V I ++K
Sbjct: 604 NIPTAT-------SRSVLLKNMFNPEEETEQGWDIELRDDVKGECEEKYGPVLAIAIEKE 656
Query: 600 S-AGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFM 636
S AG +Y+ F+S +A A ++ RWF R I+A F+
Sbjct: 657 STAGDIYITFDSVPSAQKAITGLNNRWFGGRQITAAFI 694
>gi|426241412|ref|XP_004014585.1| PREDICTED: RNA-binding protein 39 isoform 6 [Ovis aries]
gi|426241416|ref|XP_004014587.1| PREDICTED: RNA-binding protein 39 isoform 8 [Ovis aries]
Length = 373
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 136/339 (40%), Positives = 190/339 (56%), Gaps = 36/339 (10%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 379
Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP +
Sbjct: 41 YVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM-----R 94
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A L
Sbjct: 95 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 154
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DRT 496
NG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L + T
Sbjct: 155 NG-FELTGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGT 210
Query: 497 GI--------ATSIAGSLGVAPAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVIPNMAA 547
G+ A ++GSL S V I L + Q A + +A
Sbjct: 211 GLQIPPAAQQALQMSGSLAFGAVAEFSFV----IDLQTRLSQQTEASALAAAASVQPLA- 265
Query: 548 EFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYL 606
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY+
Sbjct: 266 ------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYV 319
Query: 607 RFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 320 KCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 358
>gi|392597434|gb|EIW86756.1| splicing factor CC1-like protein [Coniophora puteana RWD-64-598
SS2]
Length = 360
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 146/448 (32%), Positives = 218/448 (48%), Gaps = 110/448 (24%)
Query: 198 RESRRYKEKKEVVEPEADPERDQ--RTVFAYQMPLKATERDVYEFFSKA---GKVRDVRL 252
R S Y +++E P+ E D R+VF Q+ + T RD+ FF G V D R+
Sbjct: 5 RASPSYDQQQEDYNPDEPKEDDSEARSVFVSQLAARLTARDLGYFFEDKLGEGTVLDSRI 64
Query: 253 IMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLD 312
+ DR SRRSKG+G
Sbjct: 65 VTDRISRRSKGIG----------------------------------------------- 77
Query: 313 PATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQ---SNTSAGGTA 369
V +R I+ V A+ LSG +++G P+MV+ +E+E+N + N +
Sbjct: 78 ----YVEFRSIDL-----VEKALGLSGTVVMGLPIMVQLTESERNRLHPGDGNLNLPPGV 128
Query: 370 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 429
P+GA+ +LYVG+LHFN+TE ++++FEPFG +E V L D TG+ KG+ FVQ+ +
Sbjct: 129 HAPHGAM--QLYVGSLHFNLTEADIKQVFEPFGDLEFVDLHRDSTTGRSKGYAFVQYKRP 186
Query: 430 EHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALL 489
E AK A ++G E+ GRTL+V++V + + TA + ++ GG LNA SR L
Sbjct: 187 EDAKMALEQMDG-FELAGRTLRVNTVHE----KGTARYTQQDSLEETGGGNLNAASRQAL 241
Query: 490 MQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEF 549
MQKL R I P +P V+ P IP
Sbjct: 242 MQKLAR--------------------------IETPTPAEP------VSRPSIPQAMQ-- 267
Query: 550 IGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECS-KYGRVKHIYVDKRSAGFVYLRF 608
S +L+KNMFDP ET+ D+D E+ DV+ EC KYG+V+ I V+K + G +Y++F
Sbjct: 268 ----SRSVLMKNMFDPEEETERDWDKELAEDVKGECQEKYGKVEAIKVEKETQGEIYVKF 323
Query: 609 ESTEAAASAQRAMHMRWFARRLISAIFM 636
+ ++A A +A++ RWF R ISA+F+
Sbjct: 324 ATIDSAKEAVQALNGRWFGGRQISAVFI 351
>gi|410055058|ref|XP_003316934.2| PREDICTED: uncharacterized protein LOC458443 isoform 4 [Pan
troglodytes]
gi|410055062|ref|XP_003953767.1| PREDICTED: uncharacterized protein LOC458443 [Pan troglodytes]
gi|426391515|ref|XP_004062118.1| PREDICTED: RNA-binding protein 39 isoform 5 [Gorilla gorilla
gorilla]
gi|426391519|ref|XP_004062120.1| PREDICTED: RNA-binding protein 39 isoform 7 [Gorilla gorilla
gorilla]
gi|119596566|gb|EAW76160.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_b [Homo
sapiens]
gi|119596571|gb|EAW76165.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_b [Homo
sapiens]
Length = 373
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 136/339 (40%), Positives = 190/339 (56%), Gaps = 36/339 (10%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 379
Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP +
Sbjct: 41 YVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM-----R 94
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A L
Sbjct: 95 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 154
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DRT 496
NG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L + T
Sbjct: 155 NG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGT 210
Query: 497 GI--------ATSIAGSLGVAPAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVIPNMAA 547
G+ A ++GSL S V I L + Q A + +A
Sbjct: 211 GLQIPPAAQQALQMSGSLAFGAVAEFSFV----IDLQTRLSQQTEASALAAAASVQPLA- 265
Query: 548 EFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYL 606
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY+
Sbjct: 266 ------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYV 319
Query: 607 RFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 320 KCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 358
>gi|34365067|emb|CAE45890.1| hypothetical protein [Homo sapiens]
Length = 373
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 136/339 (40%), Positives = 190/339 (56%), Gaps = 36/339 (10%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 379
Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP +
Sbjct: 41 YVEFVDVSSVPLAIGLTGQRVLGVPIVVQASQAEKNRAAAMANNLQKGSA-GPM-----R 94
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A L
Sbjct: 95 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 154
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DRT 496
NG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L + T
Sbjct: 155 NG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGT 210
Query: 497 GI--------ATSIAGSLGVAPAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVIPNMAA 547
G+ A ++GSL S V I L + Q A + +A
Sbjct: 211 GLQIPPAAQQALQMSGSLAFGAVAEFSFV----IDLQTRLSQQTEASALAAAASVQPLA- 265
Query: 548 EFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYL 606
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY+
Sbjct: 266 ------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYV 319
Query: 607 RFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 320 KCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 358
>gi|260834973|ref|XP_002612484.1| hypothetical protein BRAFLDRAFT_214383 [Branchiostoma floridae]
gi|229297861|gb|EEN68493.1| hypothetical protein BRAFLDRAFT_214383 [Branchiostoma floridae]
Length = 466
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 156/489 (31%), Positives = 223/489 (45%), Gaps = 131/489 (26%)
Query: 212 PEADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMM 270
P+ PE RDQRTVF Q+ + +D+ +FFS GKVR+VRLI DRNSRR KG+
Sbjct: 37 PQLSPEERDQRTVFVMQLSQRVRPKDLEDFFSSVGKVREVRLIADRNSRRHKGIA----- 91
Query: 271 RDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMS 330
+ ++ CV P + ++ + ++
Sbjct: 92 -------YCEFTDASCV-------------------------PMAIGLTNQ-----KLLG 114
Query: 331 VPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNT-SAGGTATGPYGAIDRKLYVGNLHFNM 389
VP+ +V+ S+AEKN +N+ + ++GP +LYVG+LHFN+
Sbjct: 115 VPI--------------IVQASQAEKNRAAANSQNLQKGSSGP-----MRLYVGSLHFNI 155
Query: 390 TETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRT 449
TE LR +FEPFG ++ +QL D ETG+ KG+GF+ F E AK A LNG E+ GR
Sbjct: 156 TEDMLRGIFEPFGKIDNIQLMKDSETGRSKGYGFITFHDAECAKKALEQLNG-FELAGRP 214
Query: 450 LKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DRTGIATSIAGSL 506
+KV VT+ D A ++ D D+ G+ L+ R LM KL + TG
Sbjct: 215 MKVGHVTER---SDAGAATSFLDSDELERTGIELSTTGRLQLMAKLAEGTGFEM------ 265
Query: 507 GVAPAVNGSAVNQQAISLPVVGQPAVP--VPAVTAPV----------IPNMAAEFIGSPS 554
PA SA+N SL G P +P P V AP P +
Sbjct: 266 ---PAAAQSALNMPMASL--TGLPTLPGAGPGVAAPAGVMPAAGQQQPPPPPVPIPAYAT 320
Query: 555 ECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS-------------- 600
C L NMFD ME P++D+EI+ DV EEC+K+G V H++VDK S
Sbjct: 321 PCFQLSNMFDIKMENAPNWDMEIRNDVVEECTKHGGVLHVFVDKNSDNVSHDTHSHFVFL 380
Query: 601 ------------------------AGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFM 636
G VY++ + + AA+ A+H RWFA ++I A ++
Sbjct: 381 SLYQQMGQMPEFTAQSFHHTLFCLQGNVYVKCPNIQTAAACVNALHGRWFAGKMIQANYV 440
Query: 637 KPEDYEAKF 645
+Y A F
Sbjct: 441 PIVNYHALF 449
>gi|388517761|gb|AFK46942.1| unknown [Lotus japonicus]
Length = 175
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/167 (57%), Positives = 122/167 (73%), Gaps = 14/167 (8%)
Query: 479 LALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVT 538
L+LNA SRA LMQKLDR+G S+ G LG SAVN +++LPV G + +P T
Sbjct: 19 LSLNASSRASLMQKLDRSGTTPSMVGFLG------DSAVNNTSLNLPVGG---LQIPTAT 69
Query: 539 APVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDK 598
P + + IG PSECL+LKNMFDP ET+PDFDL+I+ DVE ECSK+G++KHIYVDK
Sbjct: 70 IPSV-----DTIGVPSECLMLKNMFDPKAETEPDFDLDIKEDVEAECSKFGKLKHIYVDK 124
Query: 599 RSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+SAGFVYLRFE+T+AA AQRA+H RWFA ++I+ FM P+ YE +F
Sbjct: 125 KSAGFVYLRFEATQAAIGAQRALHGRWFAGKMITVSFMVPQSYEDRF 171
>gi|409083550|gb|EKM83907.1| hypothetical protein AGABI1DRAFT_110515 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 563
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/319 (38%), Positives = 174/319 (54%), Gaps = 49/319 (15%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATG---PYGAIDR 378
Y+EF + V AI LSG +++G P+MV+ +EAE+N + + G P+GAI
Sbjct: 281 YVEFRTIELVEKAIGLSGTVVMGLPIMVQLTEAERNKTHAGDGSINLPPGVSAPHGAI-- 338
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
LYVG+LHFN+TE+ ++++FE FG +E V L D TG+ KG+ FVQ+ + E A+ A
Sbjct: 339 -LYVGSLHFNLTESDIKQVFEVFGELEFVDLHRDAMTGRSKGYAFVQYKRAEDARMALQQ 397
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGI 498
+ G E+ GRTL+V++V + T+ T S D+ GG LNA SR LMQKL RT
Sbjct: 398 MEG-FELAGRTLRVNTVHEKGTTKYTQQDSL----DESGGGNLNAASRQALMQKLART-- 450
Query: 499 ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLL 558
QPA V P IP S +L
Sbjct: 451 -----------------------------DQPAPRPEPVQRPNIPQAMQ------SRSVL 475
Query: 559 LKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASA 617
LKNMFDP ET+ D+D E+ DV+ EC SKYG+V I V+K S G +Y++F+S + A A
Sbjct: 476 LKNMFDPDEETEKDWDRELAQDVKGECESKYGKVLAIKVEKDSQGEIYVKFDSIDYAQKA 535
Query: 618 QRAMHMRWFARRLISAIFM 636
+ ++ RWF R +SA+F+
Sbjct: 536 IQGLNGRWFGGRQVSAVFI 554
>gi|426201409|gb|EKV51332.1| hypothetical protein AGABI2DRAFT_189584 [Agaricus bisporus var.
bisporus H97]
Length = 563
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/319 (38%), Positives = 174/319 (54%), Gaps = 49/319 (15%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATG---PYGAIDR 378
Y+EF + V AI LSG +++G P+MV+ +EAE+N + + G P+GAI
Sbjct: 281 YVEFRTIELVEKAIGLSGTVVMGLPIMVQLTEAERNKTHAGDGSINLPPGVSAPHGAI-- 338
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
LYVG+LHFN+TE+ ++++FE FG +E V L D TG+ KG+ FVQ+ + E A+ A
Sbjct: 339 -LYVGSLHFNLTESDIKQVFEVFGELEFVDLHRDAMTGRSKGYAFVQYKRAEDARMALQQ 397
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGI 498
+ G E+ GRTL+V++V + T+ T S D+ GG LNA SR LMQKL RT
Sbjct: 398 MEG-FELAGRTLRVNTVHEKGTTKYTQQDSL----DESGGGNLNAASRQALMQKLART-- 450
Query: 499 ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLL 558
QPA V P IP S +L
Sbjct: 451 -----------------------------DQPAPRPEPVQRPNIPQAMQ------SRSVL 475
Query: 559 LKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASA 617
LKNMFDP ET+ D+D E+ DV+ EC SKYG+V I V+K S G +Y++F+S + A A
Sbjct: 476 LKNMFDPDEETEKDWDRELAQDVKGECESKYGKVLAIKVEKDSQGEIYVKFDSIDYAQKA 535
Query: 618 QRAMHMRWFARRLISAIFM 636
+ ++ RWF R +SA+F+
Sbjct: 536 IQGLNGRWFGGRQVSAVFI 554
>gi|307180960|gb|EFN68748.1| RNA-binding protein 39 [Camponotus floridanus]
Length = 529
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/326 (39%), Positives = 184/326 (56%), Gaps = 32/326 (9%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF D SV +A+ LSGQ LLG P++V+ ++AEKN + N+ G G + +LY
Sbjct: 215 YVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRM-GNSMPNLMPKGQTGPM--RLY 271
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VG+LHFN+TE LR +FEPFG ++ +QL +D ETG+ KG+GF+ F + AK A LNG
Sbjct: 272 VGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNG 331
Query: 442 KLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIAT 500
E+ GR +KV +VT+ D D+ D G+ L A R LM KL + TG+
Sbjct: 332 -FELAGRPMKVGNVTERTDLIQ-GPSLLDTDELDRSGIDLGATGRLQLMFKLAEGTGLEI 389
Query: 501 SIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLK 560
P +A+N P +T P P AA I ++C +L
Sbjct: 390 ---------PPAAANALNM--------------APVMTQPQPPPQAAPPIA--TQCFMLS 424
Query: 561 NMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQR 619
NMFDP ET+P++ EI+ DV EEC+K+G V H+YVD+ S G VY++ S A +A
Sbjct: 425 NMFDPQNETNPNWAKEIRDDVIEECNKHGGVLHVYVDQASPQGNVYVKCPSIATAVAAVN 484
Query: 620 AMHMRWFARRLISAIFMKPEDYEAKF 645
++H RWFA R+I+A ++ +Y + F
Sbjct: 485 SLHGRWFAGRVITAAYVPVVNYHSLF 510
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 36/78 (46%), Gaps = 25/78 (32%)
Query: 187 ELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGK 246
EL PE ERD RTVF Q+ + RD+ EFFS GK
Sbjct: 161 ELT----------------------PE---ERDARTVFCMQLSQRIRARDLEEFFSSVGK 195
Query: 247 VRDVRLIMDRNSRRSKGV 264
V+DVRLI +RR KG+
Sbjct: 196 VQDVRLITCNKTRRFKGI 213
>gi|328781105|ref|XP_624668.3| PREDICTED: RNA-binding protein 39-like [Apis mellifera]
Length = 506
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/328 (37%), Positives = 181/328 (55%), Gaps = 36/328 (10%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF D SV +A+ LSGQ LLG P++V+ ++AEKN + N+ G G + +LY
Sbjct: 192 YVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRM-GNSMPNLMPKGQTGPM--RLY 248
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VG+LHFN+TE LR +FEPFG ++ +QL +D ETG+ KG+GF+ F + AK A LNG
Sbjct: 249 VGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNG 308
Query: 442 KLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTG--I 498
E+ GR +KV +VT+ D D+ D G+ L A R LM KL + TG I
Sbjct: 309 -FELAGRPMKVGNVTERTDLIQ-GPSLLDTDELDRSGIELGATGRLQLMFKLAEGTGLEI 366
Query: 499 ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLL 558
+ A +L +AP ++ Q ++C +
Sbjct: 367 PPAAANALNMAPVMSTPQPPPQVAPP---------------------------IATQCFM 399
Query: 559 LKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASA 617
L NMFDP ET+P++ EI+ DV EEC+K+G V H+YVD+ S G VY++ S A +A
Sbjct: 400 LSNMFDPQNETNPNWAKEIRDDVIEECNKHGGVLHVYVDQASPQGNVYVKCPSIGTAVAA 459
Query: 618 QRAMHMRWFARRLISAIFMKPEDYEAKF 645
++H RWFA R+I+A ++ +Y + F
Sbjct: 460 VNSLHGRWFAGRVITAAYVPVVNYHSLF 487
>gi|256082940|ref|XP_002577709.1| splicing factor [Schistosoma mansoni]
gi|360043602|emb|CCD81148.1| putative splicing factor [Schistosoma mansoni]
Length = 463
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 139/442 (31%), Positives = 211/442 (47%), Gaps = 94/442 (21%)
Query: 212 PEADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMM 270
PE PE RD RTVF +Q+ + +RD+ +FF+ GK+RDVRLIMD ++RSKG+
Sbjct: 94 PELSPEERDARTVFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMDNKTKRSKGIA----- 148
Query: 271 RDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMS 330
V +R +E S
Sbjct: 149 ----------------------------------------------YVEFREVE-----S 157
Query: 331 VPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMT 390
+A+ L+G LLG P+ ++ S AEKN V + S + G + KLY+G+LH+N+T
Sbjct: 158 AQLALGLTGTRLLGVPIQIQQSHAEKNRVSATPSLPRPSQQNRGPM--KLYIGSLHYNIT 215
Query: 391 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 450
E L+ +FEPFG +E ++L D T + +G+GFV + + AK A LNG E+ GR +
Sbjct: 216 EEMLKGIFEPFGKIEDIKLIKDPTTNRSQGYGFVTYVNSDDAKKALDQLNG-FELAGRPM 274
Query: 451 KVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAP 510
KV+ VT+ ++ + D D+ D G+ L R LM KL
Sbjct: 275 KVNHVTER--SEYACLSALDNDEADRSGVDLGTTGRLALMAKLAEG-------------- 318
Query: 511 AVNGSAVNQQAISLPVVGQPAVPVPAVTAPVI----PNMAAEFIGSP--SECLLLKNMFD 564
G + + A++ +GQ P++ ++ I P ++C +L NMFD
Sbjct: 319 --TGLEIPKAALAQLHIGQ--------NNPILGSAGSVSSSSAIAPPVCTQCFMLSNMFD 368
Query: 565 PAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHM 623
P + T F+ EI+ DV EEC+K G HI+VD+ SA G VY++ S A +H
Sbjct: 369 PHVATHSVFE-EIRDDVIEECTKAGGCLHIFVDRTSAQGNVYVKCPSIAVATQCVNMLHG 427
Query: 624 RWFARRLISAIFMKPEDYEAKF 645
R+F+ RLI+A ++ +Y F
Sbjct: 428 RYFSGRLITAAYVPLINYHQLF 449
>gi|226469236|emb|CAX70097.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 463
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 139/442 (31%), Positives = 211/442 (47%), Gaps = 94/442 (21%)
Query: 212 PEADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMM 270
PE PE RD RTVF +Q+ + +RD+ +FF+ GK+RDVRLIMD ++RSKG+
Sbjct: 94 PELSPEERDARTVFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMDNKTKRSKGIA----- 148
Query: 271 RDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMS 330
V +R +E S
Sbjct: 149 ----------------------------------------------YVEFREVE-----S 157
Query: 331 VPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMT 390
+A+ L+G LLG P+ ++ S AEKN V + S + G + KLY+G+LH+N+T
Sbjct: 158 AQLALGLTGTRLLGVPIQIQQSHAEKNRVSATPSLPRPSQQNKGPM--KLYIGSLHYNIT 215
Query: 391 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 450
E L+ +FEPFG +E ++L D T + +G+GFV + + AK A LNG E+ GR +
Sbjct: 216 EEMLKGIFEPFGKIEDIKLIKDPATNRSQGYGFVTYVNSDDAKKALDQLNG-FELAGRPM 274
Query: 451 KVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAP 510
KV+ VT+ ++ + D D+ D G+ L R LM KL
Sbjct: 275 KVNHVTER--SEYACLSALDNDEADRSGVDLGTTGRLALMAKLAEG-------------- 318
Query: 511 AVNGSAVNQQAISLPVVGQPAVPVPAVTAPVI----PNMAAEFIGSP--SECLLLKNMFD 564
G + + A++ +GQ P++ ++ I P ++C +L NMFD
Sbjct: 319 --TGLEIPKAALAQLHIGQ--------NNPILGSAGSVSSSSAIAPPVCTQCFMLSNMFD 368
Query: 565 PAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHM 623
P + T F+ EI+ DV EEC+K G HI+VD+ SA G VY++ S A +H
Sbjct: 369 PHVATHSVFE-EIRDDVIEECTKAGGCLHIFVDRTSAQGNVYVKCPSIAVATQCVNMLHG 427
Query: 624 RWFARRLISAIFMKPEDYEAKF 645
R+F+ RLI+A ++ +Y F
Sbjct: 428 RYFSGRLITAAYVPLINYHQLF 449
>gi|383864352|ref|XP_003707643.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Megachile
rotundata]
Length = 530
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/328 (38%), Positives = 182/328 (55%), Gaps = 36/328 (10%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF D SV +A+ LSGQ LLG P++V+ ++AEKN + N+ G G + +LY
Sbjct: 216 YVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRM-GNSMPNLMPKGQTGPM--RLY 272
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VG+LHFN+TE LR +FEPFG ++ +QL +D ETG+ KG+GF+ F + AK A LNG
Sbjct: 273 VGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNG 332
Query: 442 KLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTG--I 498
E+ GR +KV +VT+ D D+ D G+ L A R LM KL + TG I
Sbjct: 333 -FELAGRPMKVGNVTERTDLIQ-GPSLLDTDELDRSGIDLGATGRLQLMFKLAEGTGLEI 390
Query: 499 ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLL 558
+ A +L +AP ++ QA ++C +
Sbjct: 391 PPAAANALNMAPVMSTPQPPPQAAPP---------------------------IATQCFM 423
Query: 559 LKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASA 617
L NMFDP ET+P++ EI+ DV EEC+K+G V H+YVD+ S G VY++ S A +A
Sbjct: 424 LSNMFDPQNETNPNWAKEIRDDVIEECNKHGGVLHVYVDQASPQGNVYVKCPSIATAVAA 483
Query: 618 QRAMHMRWFARRLISAIFMKPEDYEAKF 645
++H RWFA R+I+A ++ +Y + F
Sbjct: 484 VNSLHGRWFAGRVITAAYVPVVNYHSLF 511
>gi|350410158|ref|XP_003488966.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus impatiens]
Length = 532
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/328 (38%), Positives = 182/328 (55%), Gaps = 36/328 (10%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF D SV +A+ LSGQ LLG P++V+ ++AEKN + N+ G G + +LY
Sbjct: 218 YVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRM-GNSMPNLMPKGQTGPM--RLY 274
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VG+LHFN+TE LR +FEPFG ++ +QL +D ETG+ KG+GF+ F + AK A LNG
Sbjct: 275 VGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNG 334
Query: 442 KLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTG--I 498
E+ GR +KV +VT+ D D+ D G+ L A R LM KL + TG I
Sbjct: 335 -FELAGRPMKVGNVTERTDLIQ-GPSLLDTDELDRSGIDLGATGRLQLMFKLAEGTGLEI 392
Query: 499 ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLL 558
+ A +L +AP ++ QA ++C +
Sbjct: 393 PPAAANALNMAPVMSTPQPPPQAAPP---------------------------IATQCFM 425
Query: 559 LKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASA 617
L NMFDP ET+P++ EI+ DV EEC+K+G V H+YVD+ S G VY++ S A +A
Sbjct: 426 LSNMFDPQNETNPNWAKEIRDDVIEECNKHGGVLHVYVDQASPQGNVYVKCPSIATAVAA 485
Query: 618 QRAMHMRWFARRLISAIFMKPEDYEAKF 645
++H RWFA R+I+A ++ +Y + F
Sbjct: 486 VNSLHGRWFAGRVITAAYVPVVNYHSLF 513
>gi|340718898|ref|XP_003397899.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus
terrestris]
Length = 520
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/328 (38%), Positives = 182/328 (55%), Gaps = 36/328 (10%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF D SV +A+ LSGQ LLG P++V+ ++AEKN + N+ G G + +LY
Sbjct: 206 YVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRM-GNSMPNLMPKGQTGPM--RLY 262
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VG+LHFN+TE LR +FEPFG ++ +QL +D ETG+ KG+GF+ F + AK A LNG
Sbjct: 263 VGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNG 322
Query: 442 KLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTG--I 498
E+ GR +KV +VT+ D D+ D G+ L A R LM KL + TG I
Sbjct: 323 -FELAGRPMKVGNVTERTDLIQ-GPSLLDTDELDRSGIDLGATGRLQLMFKLAEGTGLEI 380
Query: 499 ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLL 558
+ A +L +AP ++ QA ++C +
Sbjct: 381 PPAAANALNMAPVMSTPQPPPQAAPP---------------------------IATQCFM 413
Query: 559 LKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASA 617
L NMFDP ET+P++ EI+ DV EEC+K+G V H+YVD+ S G VY++ S A +A
Sbjct: 414 LSNMFDPQNETNPNWAKEIRDDVIEECNKHGGVLHVYVDQASPQGNVYVKCPSIATAVAA 473
Query: 618 QRAMHMRWFARRLISAIFMKPEDYEAKF 645
++H RWFA R+I+A ++ +Y + F
Sbjct: 474 VNSLHGRWFAGRVITAAYVPVVNYHSLF 501
>gi|392571432|gb|EIW64604.1| splicing factor CC1-like protein [Trametes versicolor FP-101664
SS1]
Length = 344
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 144/433 (33%), Positives = 209/433 (48%), Gaps = 108/433 (24%)
Query: 211 EPEADPERDQRTVFAYQMPLKATERDVYEFFSKA---GKVRDVRLIMDRNSRRSKGVGNA 267
EP D + + R+VF Q+ + T RD+ FF G V D R++ DR SRRSKG+G
Sbjct: 4 EPSPD-DSEARSVFVSQLAARLTARDLGYFFEDKLGEGSVMDSRIVTDRISRRSKGIG-- 60
Query: 268 IMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYD 327
V +R +E D
Sbjct: 61 -------------------------------------------------YVEFRTVELVD 71
Query: 328 VMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQ---SNTSAGGTATGPYGAIDRKLYVGN 384
AI LSG +++G P+ ++ +EAE+N + N + + P+G + +LYVG+
Sbjct: 72 -----RAIGLSGTVVMGLPIQIQHTEAERNRLHPGDGNLNLPPGVSAPHGGM--QLYVGS 124
Query: 385 LHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLE 444
LHFN+TE+ ++++FEPFG +E V L D TG+ KG+ FVQ+ + E AK A + G E
Sbjct: 125 LHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDAKMALEQMEG-FE 183
Query: 445 IVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAG 504
+ GRTL+V++V + T+ T + D+ GG LNA SR LMQKL RT
Sbjct: 184 LAGRTLRVNTVHEKGSTRYTQQDTL----DEAGGGNLNAASRQALMQKLARTD------- 232
Query: 505 SLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFD 564
S PV +P V P IP S +LLKNMF+
Sbjct: 233 ------------------SAPVKLEP------VARPHIPQTMQ------SRSVLLKNMFN 262
Query: 565 PAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHM 623
P ET+ D+D ++ DV+ EC +KYG V+ I V+K + G +Y+ FE+ +AA A ++
Sbjct: 263 PEEETERDWDKDLADDVKSECATKYGPVQAIKVEKETQGEIYVLFETVDAAGQAIEGLNG 322
Query: 624 RWFARRLISAIFM 636
RWF R ISA F+
Sbjct: 323 RWFGGRQISAAFI 335
>gi|307195359|gb|EFN77277.1| RNA-binding protein 39 [Harpegnathos saltator]
Length = 370
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 129/326 (39%), Positives = 185/326 (56%), Gaps = 32/326 (9%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF D SV +A+ LSGQ LLG P++V+ ++AEKN + N+ G G + +LY
Sbjct: 56 YVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRM-GNSMPNLMPKGQTGPM--RLY 112
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VG+LHFN+TE LR +FEPFG ++ +QL +D ETG+ KG+GF+ F + AK A LNG
Sbjct: 113 VGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNG 172
Query: 442 KLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIAT 500
E+ GR +KV +VT+ D D+ D G+ L A R LM KL + TG+
Sbjct: 173 -FELAGRPMKVGNVTERTDLIQ-GPSLLDTDELDRSGIDLGATGRLQLMFKLAEGTGLEI 230
Query: 501 SIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLK 560
P +A+N P +TAP P AA I ++C +L
Sbjct: 231 ---------PPAAANALNM--------------APVMTAPQPPPQAAPPIA--TQCFMLS 265
Query: 561 NMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQR 619
NMFDP ET+P++ EI+ DV EEC+K+G V H+YVD+ S G VY++ S A +A
Sbjct: 266 NMFDPQNETNPNWAKEIRDDVIEECNKHGGVLHVYVDQASPQGNVYVKCPSIATAVAAVN 325
Query: 620 AMHMRWFARRLISAIFMKPEDYEAKF 645
++H RWFA R+I+A ++ +Y + F
Sbjct: 326 SLHGRWFAGRVITAAYVPVVNYHSLF 351
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 32/48 (66%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGV 264
ERD RTVF Q+ + RD+ EFFS GKV+DVRLI +RR KG+
Sbjct: 7 ERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGI 54
>gi|383864354|ref|XP_003707644.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Megachile
rotundata]
Length = 507
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/328 (38%), Positives = 182/328 (55%), Gaps = 36/328 (10%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF D SV +A+ LSGQ LLG P++V+ ++AEKN + N+ G G + +LY
Sbjct: 193 YVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRM-GNSMPNLMPKGQTGPM--RLY 249
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VG+LHFN+TE LR +FEPFG ++ +QL +D ETG+ KG+GF+ F + AK A LNG
Sbjct: 250 VGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNG 309
Query: 442 KLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTG--I 498
E+ GR +KV +VT+ D D+ D G+ L A R LM KL + TG I
Sbjct: 310 -FELAGRPMKVGNVTERTDLIQ-GPSLLDTDELDRSGIDLGATGRLQLMFKLAEGTGLEI 367
Query: 499 ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLL 558
+ A +L +AP ++ QA ++C +
Sbjct: 368 PPAAANALNMAPVMSTPQPPPQAAPP---------------------------IATQCFM 400
Query: 559 LKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASA 617
L NMFDP ET+P++ EI+ DV EEC+K+G V H+YVD+ S G VY++ S A +A
Sbjct: 401 LSNMFDPQNETNPNWAKEIRDDVIEECNKHGGVLHVYVDQASPQGNVYVKCPSIATAVAA 460
Query: 618 QRAMHMRWFARRLISAIFMKPEDYEAKF 645
++H RWFA R+I+A ++ +Y + F
Sbjct: 461 VNSLHGRWFAGRVITAAYVPVVNYHSLF 488
>gi|350410161|ref|XP_003488967.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus impatiens]
Length = 508
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/328 (38%), Positives = 182/328 (55%), Gaps = 36/328 (10%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF D SV +A+ LSGQ LLG P++V+ ++AEKN + N+ G G + +LY
Sbjct: 194 YVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRM-GNSMPNLMPKGQTGPM--RLY 250
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VG+LHFN+TE LR +FEPFG ++ +QL +D ETG+ KG+GF+ F + AK A LNG
Sbjct: 251 VGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNG 310
Query: 442 KLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTG--I 498
E+ GR +KV +VT+ D D+ D G+ L A R LM KL + TG I
Sbjct: 311 -FELAGRPMKVGNVTERTDLIQ-GPSLLDTDELDRSGIDLGATGRLQLMFKLAEGTGLEI 368
Query: 499 ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLL 558
+ A +L +AP ++ QA ++C +
Sbjct: 369 PPAAANALNMAPVMSTPQPPPQAAPP---------------------------IATQCFM 401
Query: 559 LKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASA 617
L NMFDP ET+P++ EI+ DV EEC+K+G V H+YVD+ S G VY++ S A +A
Sbjct: 402 LSNMFDPQNETNPNWAKEIRDDVIEECNKHGGVLHVYVDQASPQGNVYVKCPSIATAVAA 461
Query: 618 QRAMHMRWFARRLISAIFMKPEDYEAKF 645
++H RWFA R+I+A ++ +Y + F
Sbjct: 462 VNSLHGRWFAGRVITAAYVPVVNYHSLF 489
>gi|340718900|ref|XP_003397900.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus
terrestris]
Length = 508
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/328 (38%), Positives = 182/328 (55%), Gaps = 36/328 (10%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF D SV +A+ LSGQ LLG P++V+ ++AEKN + N+ G G + +LY
Sbjct: 194 YVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRM-GNSMPNLMPKGQTGPM--RLY 250
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VG+LHFN+TE LR +FEPFG ++ +QL +D ETG+ KG+GF+ F + AK A LNG
Sbjct: 251 VGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNG 310
Query: 442 KLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTG--I 498
E+ GR +KV +VT+ D D+ D G+ L A R LM KL + TG I
Sbjct: 311 -FELAGRPMKVGNVTERTDLIQ-GPSLLDTDELDRSGIDLGATGRLQLMFKLAEGTGLEI 368
Query: 499 ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLL 558
+ A +L +AP ++ QA ++C +
Sbjct: 369 PPAAANALNMAPVMSTPQPPPQAAPP---------------------------IATQCFM 401
Query: 559 LKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASA 617
L NMFDP ET+P++ EI+ DV EEC+K+G V H+YVD+ S G VY++ S A +A
Sbjct: 402 LSNMFDPQNETNPNWAKEIRDDVIEECNKHGGVLHVYVDQASPQGNVYVKCPSIATAVAA 461
Query: 618 QRAMHMRWFARRLISAIFMKPEDYEAKF 645
++H RWFA R+I+A ++ +Y + F
Sbjct: 462 VNSLHGRWFAGRVITAAYVPVVNYHSLF 489
>gi|332019312|gb|EGI59819.1| RNA-binding protein 39 [Acromyrmex echinatior]
Length = 528
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/328 (38%), Positives = 181/328 (55%), Gaps = 36/328 (10%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF D SV +A+ LSGQ LLG P++V+ ++AEKN + N+ G G + +LY
Sbjct: 214 YVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRM-GNSMPNLMPKGQTGPM--RLY 270
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VG+LHFN+TE LR +FEPFG ++ +QL +D ETG+ KG+GF+ F + AK A LNG
Sbjct: 271 VGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNG 330
Query: 442 KLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTG--I 498
E+ GR +KV +VT+ D D+ D G+ L A R LM KL + TG I
Sbjct: 331 -FELAGRPMKVGNVTERTDLIQ-GPSLLDTDELDRSGIDLGATGRLQLMFKLAEGTGLEI 388
Query: 499 ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLL 558
+ A +L +AP + QA ++C +
Sbjct: 389 PPAAANALNMAPVMAQPQPPPQAAPP---------------------------IATQCFM 421
Query: 559 LKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASA 617
L NMFDP ET+P++ EI+ DV EEC+K+G V H+YVD+ S G VY++ S A +A
Sbjct: 422 LSNMFDPQNETNPNWAKEIRDDVIEECNKHGGVLHVYVDQASPQGNVYVKCPSIATAVAA 481
Query: 618 QRAMHMRWFARRLISAIFMKPEDYEAKF 645
++H RWFA R+I+A ++ +Y + F
Sbjct: 482 VNSLHGRWFAGRVITAAYVPVVNYHSLF 509
>gi|395334381|gb|EJF66757.1| splicing factor CC1-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 624
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 118/320 (36%), Positives = 176/320 (55%), Gaps = 50/320 (15%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQ---SNTSAGGTATGPYGAIDR 378
Y+EF V V AIALSG +++G P+ ++ +EAE+N + N + + P+G +
Sbjct: 341 YVEFRSVELVDKAIALSGTVVMGLPIQIQHTEAERNRLHPGDGNLNLPPGVSAPHGGM-- 398
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN++E+ ++++FEPFG +E V L D TG+ KG+ FVQ+ + E AK A
Sbjct: 399 QLYVGSLHFNLSESDIKQVFEPFGELEFVDLHRDPVTGRSKGYAFVQYKRAEDAKMALEQ 458
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGI 498
++G E+ GRTL+V++V + + T S D+ GG LNA SR LMQKL R
Sbjct: 459 MDG-FELAGRTLRVNTVHEKGSARYTQQDSL----DEAGGGNLNAASRQALMQKLARID- 512
Query: 499 ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVI-PNMAAEFIGSPSECL 557
P PA P+ PN+ S +
Sbjct: 513 ----------------------------------PTPAKMEPIARPNIPQTMQ---SRSV 535
Query: 558 LLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAAS 616
L+KNMF+P ET+ D+D ++ DV+ EC SKYGRV I V+K S G +Y++FE+ +AA +
Sbjct: 536 LMKNMFNPEEETERDWDKDLAEDVKGECESKYGRVLAIKVEKESQGEIYVKFETVDAAKN 595
Query: 617 AQRAMHMRWFARRLISAIFM 636
A ++ RWF R I+A F+
Sbjct: 596 AIEGLNGRWFGGRQITAAFI 615
>gi|324508128|gb|ADY43435.1| RNA-binding protein 39 [Ascaris suum]
Length = 535
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 155/517 (29%), Positives = 234/517 (45%), Gaps = 124/517 (23%)
Query: 135 ERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELRERERD 194
R+R G S RRS R R E RD
Sbjct: 114 HRDRRG----------FSPPWRRSPPRGPRLPGPE----------------------RRD 141
Query: 195 LEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIM 254
+ +RR ++ ++ ERDQRTVF Q+ + RD+ EFFS G VRDVR+I
Sbjct: 142 VMPFTARRSPPPNAKLDMTSE-ERDQRTVFILQIARQTRPRDLEEFFSSVGHVRDVRIIT 200
Query: 255 DRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPA 314
D +RRSKG+ C V
Sbjct: 201 DSKTRRSKGI--------------------CYV--------------------------- 213
Query: 315 TVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYG 374
EF+++ SV +A+AL+GQ LLG P++++P+ AE+N +NT G GP
Sbjct: 214 ---------EFWEIESVNLALALNGQKLLGAPLVIQPTLAERNRAANNTVGGSLGFGPTN 264
Query: 375 AI-DRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
KLY+G LH ++TE LR++FEPFG ++ +++ D+ +G KG+ +V F + AK
Sbjct: 265 TTGPLKLYIGQLHTSITEDMLRRIFEPFGKIDTLEIATDL-SGVSKGYAYVTFRHADDAK 323
Query: 434 AAQSALNGKLEIVGRTLKVSSV-TDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A +NG E+ GR +KV +V D V +Q ++ D D+ D G+ L R LM K
Sbjct: 324 RAMEQMNG-FELAGRPMKVGTVDGDEVPSQ--PQRTLDTDEADRRGIDLGTSGRLHLMAK 380
Query: 493 L-DRTG--IATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEF 549
L + +G + S L + Q +++P +
Sbjct: 381 LAEGSGLELPKSAKDMLAQNQQQQQQTDSSQNLAIPPIA--------------------- 419
Query: 550 IGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRF 608
++C LL NMFDPA ET ++ E++ DV EEC+K G V HI+VD+ S +G VY++
Sbjct: 420 ----TQCFLLSNMFDPAQETGENWADEVRDDVIEECAKNGGVVHIFVDRESPSGNVYVKC 475
Query: 609 ESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
S AA + ++H RWF+ ++I+A ++ Y F
Sbjct: 476 PSVAAAYKSVNSLHGRWFSGKVITANYIPVASYSQLF 512
>gi|170575391|ref|XP_001893221.1| splicing factor, CC1-like family protein [Brugia malayi]
gi|158600898|gb|EDP37951.1| splicing factor, CC1-like family protein [Brugia malayi]
Length = 640
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 150/493 (30%), Positives = 215/493 (43%), Gaps = 128/493 (25%)
Query: 155 SRRSSSRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEA 214
+ R S + + SE
Sbjct: 246 TARRSPPPNAKMDMTSE------------------------------------------- 262
Query: 215 DPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDG 274
ERDQRTVF Q+ + RD+ EFFS G VRDVR+I D +RRSKG+
Sbjct: 263 --ERDQRTVFILQIAKETRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGI---------- 310
Query: 275 NTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMA 334
C + EF+++ SV +A
Sbjct: 311 -----CYV-----------------------------------------EFWEIESVNLA 324
Query: 335 IALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID-RKLYVGNLHFNMTETQ 393
+AL+GQ LLG P++++P+ AE+N +NT G GP KLYVG LH ++TE
Sbjct: 325 LALNGQKLLGAPLVIQPTLAERNRAANNTVGGTLGFGPTNTTGPLKLYVGQLHTSITEDM 384
Query: 394 LRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVS 453
L ++F+PFG +E +++ D+ +G KG+ +V F + K A +NG E+ GR +KV
Sbjct: 385 LGRIFDPFGKIENLEIATDL-SGVSKGYAYVTFRHADDGKRAMEQMNG-FELAGRPMKVC 442
Query: 454 SVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVN 513
SV ++ D DD D G+ L R LM KL G + S A
Sbjct: 443 SVEGDEMPPPVPQRTLDTDDADRRGIDLGTSGRLHLMAKLAE-GSGLELPKS-----AKE 496
Query: 514 GSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDF 573
A NQQ + VT P IP +A ++C +L NMFDP+ ET +
Sbjct: 497 ILAQNQQQLE----------SATVTGPAIPPIA-------TQCFMLSNMFDPSQETGETW 539
Query: 574 DLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLIS 632
E++ DV EEC+K G V HI+VDK S G VY++ S AA + A+H RWF+ ++I+
Sbjct: 540 ADEVRDDVIEECAKNGGVLHIFVDKASPNGNVYVKCPSVAAAFKSVNALHGRWFSGKVIT 599
Query: 633 AIFMKPEDYEAKF 645
A ++ Y F
Sbjct: 600 ANYVPVASYSQLF 612
>gi|380012525|ref|XP_003690330.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like [Apis
florea]
Length = 506
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 123/328 (37%), Positives = 180/328 (54%), Gaps = 36/328 (10%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF D SV +A+ LSGQ LLG P++V+ ++AEKN + N+ G G + +LY
Sbjct: 192 YVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRM-GNSMPNLMPKGQTGPM--RLY 248
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VG+LHFN+TE LR +FEPFG ++ +QL +D TG+ KG+GF+ F + AK A LNG
Sbjct: 249 VGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPXTGRSKGYGFLTFRNADDAKKALEQLNG 308
Query: 442 KLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTG--I 498
E+ GR +KV +VT+ D D+ D G+ L A R LM KL + TG I
Sbjct: 309 -FELAGRPMKVGNVTERTDLIQ-GPSLLDTDELDRSGIELGATGRLQLMFKLAEGTGLEI 366
Query: 499 ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLL 558
+ A +L +AP ++ Q ++C +
Sbjct: 367 PPAAANALNMAPVMSTPQPPPQVAPP---------------------------IATQCFM 399
Query: 559 LKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASA 617
L NMFDP ET+P++ EI+ DV EEC+K+G V H+YVD+ S G VY++ S A +A
Sbjct: 400 LSNMFDPQNETNPNWAKEIRDDVIEECNKHGGVLHVYVDQASPQGNVYVKCPSIGTAVAA 459
Query: 618 QRAMHMRWFARRLISAIFMKPEDYEAKF 645
++H RWFA R+I+A ++ +Y + F
Sbjct: 460 VNSLHGRWFAGRVITAAYVPVVNYHSLF 487
>gi|409051610|gb|EKM61086.1| hypothetical protein PHACADRAFT_247456 [Phanerochaete carnosa
HHB-10118-sp]
Length = 584
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/320 (38%), Positives = 170/320 (53%), Gaps = 51/320 (15%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDR--- 378
Y+EF + V AI LSG +++G P+ V+ +EAE+N T AG + P G
Sbjct: 302 YVEFRTIELVEKAIGLSGTIVMGLPIQVQHTEAERN----RTHAGDSLHLPPGVSSHHGG 357
Query: 379 -KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 437
+LYVG+LHFN+TE+ +R++FEPFG +E V L D TG+ KG+ FVQ+ + E AK A
Sbjct: 358 MQLYVGSLHFNLTESDIRQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRGEDAKMALE 417
Query: 438 ALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTG 497
+ G E+ GRTL+V++V + + T +S DD GG LNA SR LMQKL RT
Sbjct: 418 QMEG-FELAGRTLRVNTVHEKGNVRYTPQESL----DDTGGGNLNAASRQALMQKLART- 471
Query: 498 IATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECL 557
QPA + P IP S+ +
Sbjct: 472 ------------------------------DQPAARPQPIMKPNIPQSMQ------SKSV 495
Query: 558 LLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAAS 616
LLKNMF+P ET+ D+D E+ DV+ E KYG V I V++ S G +Y++F+S E+A
Sbjct: 496 LLKNMFNPEEETERDWDKELADDVKNEVEDKYGDVNFIKVERESQGEIYVKFDSIESAKK 555
Query: 617 AQRAMHMRWFARRLISAIFM 636
A +H RWF R +SA F+
Sbjct: 556 AIEGLHGRWFGGRQVSAAFI 575
>gi|390604396|gb|EIN13787.1| splicing factor CC1-like protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 433
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 149/452 (32%), Positives = 215/452 (47%), Gaps = 118/452 (26%)
Query: 198 RESRRYKEKKEVVEPEADPERDQ--RTVFAYQMPLKATERDVYEFFSKA---GKVRDVRL 252
R S Y+ E PE E D R+VF Q+ + T RD+ FF G V D R+
Sbjct: 78 RPSPTYEAPPEDYNPEEPKEDDSEARSVFVSQLAARLTARDLGYFFEDKLGEGTVMDARI 137
Query: 253 IMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLD 312
+ DR SRRSKG+G
Sbjct: 138 VTDRLSRRSKGIG----------------------------------------------- 150
Query: 313 PATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQS-----NTSAGG 367
V + IE D AI LSG +++G P+ V+ +EAE+N + N G
Sbjct: 151 ----YVELKTIELVD-----QAINLSGTVVMGLPIKVQHTEAERNRTHAGDGSLNLPPGV 201
Query: 368 TAT-GPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF 426
+ T GP R+LYVG+LHFN+TE+ ++++FEPFG +E V L D TG+ KG+ F+Q+
Sbjct: 202 SGTHGP-----RQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYCFIQY 256
Query: 427 AQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSR 486
+ E AK A + G E+ GRTL+V++V + + T +S +++GG LNA SR
Sbjct: 257 KRAEDAKMALEQMEG-FELAGRTLRVNTVHEKGTVKYTQQESL---EENGGN--LNAASR 310
Query: 487 ALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPA-VPVPAVTAPVIPNM 545
LMQKL R +PA PV V+ PVI
Sbjct: 311 QALMQKLARI--------------------------------EPARAPVETVSKPVITQT 338
Query: 546 AAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFV 604
S+ +LLKNMFDPA ET+ D+D ++ DV+ EC +KYG V I VDK S G +
Sbjct: 339 LQ------SKSVLLKNMFDPAEETEKDWDKDLADDVKVECENKYGMVNFIKVDKESQGEI 392
Query: 605 YLRFESTEAAASAQRAMHMRWFARRLISAIFM 636
Y++F++ ++A A ++ R+F R ++A F+
Sbjct: 393 YVKFDTVDSAKKAIEGLNGRYFGGRQVTATFI 424
>gi|302695543|ref|XP_003037450.1| hypothetical protein SCHCODRAFT_80935 [Schizophyllum commune H4-8]
gi|300111147|gb|EFJ02548.1| hypothetical protein SCHCODRAFT_80935 [Schizophyllum commune H4-8]
Length = 409
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 145/441 (32%), Positives = 212/441 (48%), Gaps = 114/441 (25%)
Query: 212 PEADP---------ERDQRTVFAYQMPLKATERDVYEFF-SKAGK--VRDVRLIMDRNSR 259
P+ DP + + R+VF Q+ + T RD+ FF K G+ V D R++ DR SR
Sbjct: 58 PQPDPFDEDAPNPQDSEARSVFVSQLAARLTARDLGYFFEDKLGENTVMDARIVTDRISR 117
Query: 260 RSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVS 319
RSKG+G V
Sbjct: 118 RSKGIG---------------------------------------------------YVE 126
Query: 320 YRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQS---NTSAGGTATGPYGAI 376
+R ++ D A+ LSG +++G P+MV+ +EAE+N + + N + + P+G
Sbjct: 127 FRTVDLVD-----KALDLSGTVVMGLPIMVQLTEAERNRLHAGDGNLNLPPGVSAPHGGA 181
Query: 377 DRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQ 436
+LYVG+LHFN+TE ++++FEPFG +E V L D TG+ KG+ FVQ+ + E A+ A
Sbjct: 182 -MQLYVGSLHFNLTEADIKQVFEPFGELEFVDLHRDPTTGRSKGYAFVQYKRAEDARMAM 240
Query: 437 SALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRT 496
+ G E+ GR LKV++V D G A++ DD GG LNA SR LMQKL RT
Sbjct: 241 EQMEG-FELAGRQLKVNTVHDKGGVV-RYAQTESLDDSGGGN--LNAASRQALMQKLART 296
Query: 497 GIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSEC 556
A P +P P V P IP S
Sbjct: 297 DSA------------------------------PLLPEP-VARPNIPQTME------SRS 319
Query: 557 LLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAA 615
+LLKNMFDP E+ D+D E+ DV+ EC SKYG+V I V+K + G +Y++F++ +AA
Sbjct: 320 VLLKNMFDPEEESGDDWDKELADDVKGECESKYGKVSAIKVEKETQGEIYVKFDAVDAAR 379
Query: 616 SAQRAMHMRWFARRLISAIFM 636
A + ++ RWF + +SA F+
Sbjct: 380 KAVQGLNGRWFGGKQVSAAFI 400
>gi|336389603|gb|EGO30746.1| hypothetical protein SERLADRAFT_455043 [Serpula lacrymans var.
lacrymans S7.9]
Length = 583
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/323 (36%), Positives = 174/323 (53%), Gaps = 57/323 (17%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQ---SNTSAGGTATGPYGAIDR 378
Y+EF + V AI+LSG +++G PVMV+ +E+E+N + N + + P+GA+
Sbjct: 301 YVEFRSIDMVEKAISLSGTVVMGLPVMVQLTESERNKLHPGDGNLNLPPGVSAPHGAM-- 358
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE+ ++++FEPFG +E V L D TG+ KG+ FVQ+ + E A+ A
Sbjct: 359 QLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDARMALEQ 418
Query: 439 LNGKLEIVGRTLKVSSV----TDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLD 494
+ G E+ GRTL+V++V T QDT D+ GG LNA SR LMQKL
Sbjct: 419 MEG-FELAGRTLRVNTVHEKGTARYAQQDTL--------DEAGGGNLNAASRQALMQKLA 469
Query: 495 RTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPS 554
R +P P P IP S
Sbjct: 470 RI--------------------------------EPIPKPPTNNKPTIPQAMQ------S 491
Query: 555 ECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEA 613
+LLKNMFDP ET+ D+D ++ DV+ EC KYG+V I V++ + G +Y++F S ++
Sbjct: 492 RSVLLKNMFDPEEETERDWDKDLAEDVKGECEDKYGQVDAIKVEQETQGKIYVKFNSIDS 551
Query: 614 AASAQRAMHMRWFARRLISAIFM 636
A +A + ++ RWF R +SA F+
Sbjct: 552 AKNAIQGLNGRWFGGRQVSAGFI 574
>gi|391336770|ref|XP_003742751.1| PREDICTED: RNA-binding protein 39-like [Metaseiulus occidentalis]
Length = 520
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/326 (38%), Positives = 184/326 (56%), Gaps = 37/326 (11%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF+D+ SVP+A+ L+GQ L G P++V+P++AE+N Q+N +A T GP +LY
Sbjct: 220 YVEFFDLESVPLAMGLNGQKLFGVPIIVQPTQAERNR-QANQTAAST-KGPM-----RLY 272
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VG+LHF+++E L+++FEPFG ++ V+L + +TG+ KG+GFV F + + AK A LNG
Sbjct: 273 VGSLHFDISEQMLKEIFEPFGRLDRVEL-IKEDTGKSKGYGFVTFHEADAAKKAMEQLNG 331
Query: 442 KLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIAT 500
E+ GR +KV +VT+ G +A D ++ D G+ L A R LM KL + TGI
Sbjct: 332 -FELAGRPMKVGNVTER-GMDGSAPSILDNEELDRTGIELGAHGRLALMAKLAEGTGIQL 389
Query: 501 SIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLK 560
A + QQ S P GQ N E I ++C LL
Sbjct: 390 PDAAKTAL----------QQMQSAPSFGQ------------TNNAQQESIA--TQCFLLS 425
Query: 561 NMFDPA-METDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQR 619
NMFD A + D+DLE++ DV +EC K+G H +VDK +A VY++ S A +A
Sbjct: 426 NMFDAAEAHQEKDWDLELREDVLQECRKHGGAVHCFVDKEAAN-VYVKCPSIATAVAAVG 484
Query: 620 AMHMRWFARRLISAIFMKPEDYEAKF 645
+H R+FA R+I+A ++ Y F
Sbjct: 485 VLHGRFFAGRVITAAYVPVMTYHQLF 510
>gi|336376609|gb|EGO04944.1| hypothetical protein SERLA73DRAFT_174031 [Serpula lacrymans var.
lacrymans S7.3]
Length = 583
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 117/323 (36%), Positives = 174/323 (53%), Gaps = 57/323 (17%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQ---SNTSAGGTATGPYGAIDR 378
Y+EF + V AI+LSG +++G PVMV+ +E+E+N + N + + P+GA+
Sbjct: 301 YVEFRSIDMVEKAISLSGTVVMGLPVMVQLTESERNKLHPGDGNLNLPPGVSAPHGAM-- 358
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE+ ++++FEPFG +E V L D TG+ KG+ FVQ+ + E A+ A
Sbjct: 359 QLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDARMALEQ 418
Query: 439 LNGKLEIVGRTLKVSSV----TDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLD 494
+ G E+ GRTL+V++V T QDT D+ GG LNA SR LMQKL
Sbjct: 419 MEG-FELAGRTLRVNTVHEKGTARYAQQDTL--------DEAGGGNLNAASRQALMQKLA 469
Query: 495 RTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPS 554
R +P P P IP S
Sbjct: 470 RI--------------------------------EPIPKPPTNNKPTIPQAMQ------S 491
Query: 555 ECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEA 613
+LLKNMFDP ET+ D+D ++ DV+ EC KYG+V I V++ + G +Y++F S ++
Sbjct: 492 RSVLLKNMFDPEEETERDWDKDLAEDVKGECEDKYGQVDAIKVEQETQGEIYVKFNSIDS 551
Query: 614 AASAQRAMHMRWFARRLISAIFM 636
A +A + ++ RWF R +SA F+
Sbjct: 552 AKNAIQGLNGRWFGGRQVSAGFI 574
>gi|299755304|ref|XP_002912089.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
gi|298411164|gb|EFI28595.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
Length = 580
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/320 (38%), Positives = 178/320 (55%), Gaps = 53/320 (16%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGP----YGAID 377
Y+EF + V AIALSG +++G P+ V+ +E+E+N +S+ G P GAI
Sbjct: 300 YVEFRSIDLVEKAIALSGTIVMGLPINVQLTESERN--KSHAGDGSLHLPPGVTASGAI- 356
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 437
LYVG+LHFN+TE+ ++++FEPFG +E V L D TG+ KG+ FVQ+ + E A+ A
Sbjct: 357 --LYVGSLHFNLTESDIKQVFEPFGELEFVDLHKDPMTGRSKGYAFVQYKRAEDARMALE 414
Query: 438 ALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTG 497
+ G E+ GRTL+V++V + + T S DD GG LNA SR LMQKL RT
Sbjct: 415 QMEG-FELAGRTLRVNTVHEKGSVRYTQTDSL----DDSGGANLNAASRQALMQKLART- 468
Query: 498 IATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECL 557
PVV PA PV P+IP S +
Sbjct: 469 -------------------------EQPVV--PAEPV----KPIIPQAMQ------SRSV 491
Query: 558 LLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAAS 616
LLKNMF+P ET+ ++D ++ DV+ EC +KYG+V I V+K S G +Y++F++ + A S
Sbjct: 492 LLKNMFNPEEETEQNWDKDLADDVKGECENKYGKVLAIKVEKDSQGEIYVKFDTVDTAKS 551
Query: 617 AQRAMHMRWFARRLISAIFM 636
A + ++ RWF R ISA F+
Sbjct: 552 AVQGLNGRWFGGRQISANFI 571
>gi|339237675|ref|XP_003380392.1| RNA-binding protein 39 [Trichinella spiralis]
gi|316976770|gb|EFV59992.1| RNA-binding protein 39 [Trichinella spiralis]
Length = 680
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 125/337 (37%), Positives = 185/337 (54%), Gaps = 25/337 (7%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTAT--GPYGAIDRK 379
Y+EF+D+ SVP+A++L G+ LLG P++V+P+++EKN + S A GP K
Sbjct: 274 YVEFWDLDSVPLALSLHGKRLLGAPIVVQPTQSEKNRMASAMLATAFTQNRGPM-----K 328
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG +E +QL D ET + +G+GF+ F E AK A L
Sbjct: 329 LYVGSLHFNITEEMLRGIFEPFGKIESIQLLKDPETSRSRGYGFITFYNSEDAKRAMEQL 388
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAK-SADFDDDDGGGLALNAQSRALLMQKL-DRTG 497
NG E+ GR +KV VT+H Q+T + S D D+ D G+ L R LM KL + TG
Sbjct: 389 NG-FELAGRPMKVGHVTEH---QNTLFQPSLDSDELDRSGIDLGTTGRLQLMAKLAEGTG 444
Query: 498 I-ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSEC 556
+ +A + +N Q P + A ++C
Sbjct: 445 MELPQVAKQM-----LNAQPQQHQHTLPPAMQVQQQQQQQQQQHEQQQQLASQQLIATQC 499
Query: 557 LLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAA 615
+L NMF+P E+DPD+D EI+ DV +EC+K+ V HI+VDK S G VY++ + AA
Sbjct: 500 FVLSNMFNPMAESDPDWDREIRDDVIDECNKHQGVVHIFVDKASGDGNVYVKCPTVAAAV 559
Query: 616 SAQRAMHMRWFARRLISA-----IFMKPEDYEAKFKS 647
+A ++H R+FA + + + + M + Y K +S
Sbjct: 560 AAVNSLHGRYFAGKCVVSRCLLQLCMMLQCYNGKLRS 596
>gi|301108451|ref|XP_002903307.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262097679|gb|EEY55731.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 556
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 156/498 (31%), Positives = 230/498 (46%), Gaps = 115/498 (23%)
Query: 190 ERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRD 249
ERER + R K++ E++E RD RTVF Q+ K E+D+ F +K GKV
Sbjct: 118 ERERSTSAERAERAKQR-ELMELT----RDHRTVFVGQLTQKVREKDLERFLTKTGKVE- 171
Query: 250 VRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYT 309
N +++RD KF ++
Sbjct: 172 ----------------NVLLIRD----------------KFTNRSK-------------- 185
Query: 310 VLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQ--PVMVKPSEAEKNL------VQS 361
+ Y+E ++ VP + L+GQ+ Q P+M+K SEAEKN V +
Sbjct: 186 ---------GFAYVELSNLEDVPKVLLLNGQVPDFQVFPIMIKVSEAEKNFAAKKDSVMN 236
Query: 362 NT-------SAGGTATGPYGAID------------RKLYVGNLHFNMTETQLRKLFEPFG 402
T SA G+ G GAI ++Y GNLH N+TE LR +F+ FG
Sbjct: 237 GTAASGGPLSADGSGAGLAGAISGGGMSASALSAASRIYCGNLHTNITEDDLRIVFQSFG 296
Query: 403 PVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQ 462
V V + D E G+ KGF F+QF+ + A A S NG LE+ G L++ V ++
Sbjct: 297 EVLSVTINRD-EMGRSKGFSFIQFSSPQEANFALSKGNG-LELAGSFLRLGPVNENAVGN 354
Query: 463 DTAAKSAD---------FDDDDGGGLALNAQSRALLMQKL--DRTGIATSIAGSLGVAPA 511
T S D +D++G GL++NAQSR+ LM KL + + S++G +G A
Sbjct: 355 RTGVSSVDNNATGGRWKLEDEEGEGLSMNAQSRSALMAKLAGNDVNLFPSMSG-VGGYTA 413
Query: 512 VNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAME--- 568
+ N A + Q A A+ + + F C ++KNMFD E
Sbjct: 414 STAAYTNSMAAT---AAQRAEQATALMSSSEIEGSESF------CFVVKNMFDVYQEQKS 464
Query: 569 TDPDFDLEIQGDVEEECSKYGRVKHIYVDK-RSAGFVYLRFESTEAAASAQRAMHMRWFA 627
+P++ +EIQ DVEEEC +YG V H YV+K + G VY+ F + EAA SA + +H RWF
Sbjct: 465 GNPEWGVEIQQDVEEECGQYGSVLHTYVEKEKQGGLVYVLFGTVEAAVSAAKKLHGRWFN 524
Query: 628 RRLISAIFMKPEDYEAKF 645
+R IS ++ ++Y F
Sbjct: 525 KRQISVRYLSSQEYVGMF 542
>gi|24582417|ref|NP_723245.1| CG11266, isoform C [Drosophila melanogaster]
gi|24582419|ref|NP_723246.1| CG11266, isoform D [Drosophila melanogaster]
gi|24582421|ref|NP_723247.1| CG11266, isoform F [Drosophila melanogaster]
gi|24582423|ref|NP_723248.1| CG11266, isoform G [Drosophila melanogaster]
gi|45550943|ref|NP_723244.2| CG11266, isoform E [Drosophila melanogaster]
gi|22945836|gb|AAN10616.1| CG11266, isoform C [Drosophila melanogaster]
gi|22945837|gb|AAN10617.1| CG11266, isoform D [Drosophila melanogaster]
gi|22945838|gb|AAN10618.1| CG11266, isoform F [Drosophila melanogaster]
gi|22945839|gb|AAN10619.1| CG11266, isoform G [Drosophila melanogaster]
gi|45445036|gb|AAN10615.2| CG11266, isoform E [Drosophila melanogaster]
Length = 287
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 119/301 (39%), Positives = 167/301 (55%), Gaps = 36/301 (11%)
Query: 348 MVKPSEAEKNLVQSNTSA--GGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVE 405
MV+ ++AEKN +Q+ A + TGP +LYVG+LHFN+TE LR +FEPFG ++
Sbjct: 1 MVQHTQAEKNRLQNAAPAFQPKSHTGP-----MRLYVGSLHFNITEDMLRGIFEPFGKID 55
Query: 406 LVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTA 465
+QL +D ETG+ KG+GF+ + + AK A LNG E+ GR +KV +VT+ + D
Sbjct: 56 AIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNG-FELAGRLMKVGNVTERL---DMN 111
Query: 466 AKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLP 525
S D D+ D G+ L A R LM KL G AV Q A +
Sbjct: 112 TTSLDTDEMDRTGIDLGATGRLQLMFKLAEGA----------------GLAVPQAAANAL 155
Query: 526 VVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC 585
+ P P P V P++A ++C +L NMFDP ET+P +D+EI+ DV EEC
Sbjct: 156 LATAPQ-PAPLQQQEVAPSIA-------TQCFILSNMFDPRTETNPTWDVEIRDDVLEEC 207
Query: 586 SKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAK 644
+K+G V HI+VD S G VY++ ST A A A+H RWFA R+I+A ++ +Y
Sbjct: 208 AKHGGVLHIHVDTISHTGTVYVKCPSTTTAVLAVNALHGRWFAGRVITAAYVPVINYHTM 267
Query: 645 F 645
F
Sbjct: 268 F 268
>gi|145349966|ref|XP_001419396.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579627|gb|ABO97689.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 516
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 181/339 (53%), Gaps = 21/339 (6%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLV----QSNTSAGGTATG---PY- 373
Y+EF D + A+ L+GQ L GQ + VK SEAEKN+ Q+ G + G PY
Sbjct: 180 YVEFADKKFIHPALELTGQELNGQAIAVKTSEAEKNIAWEAEQAQKKKLGASYGQGVPYI 239
Query: 374 -GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFG--FVQFAQLE 430
A KL VG LH ++E ++ +FEPFG ++ + + D + G F FVQF +
Sbjct: 240 ASAGPCKLRVGGLHLGLSEDDVKAVFEPFGELDFISMIKDDDPGAAGKFASAFVQFKLTQ 299
Query: 431 HAKAAQSALNGKLEIVGRTLKVSSVTDHV----GTQDTAAKSADFDDDDGGGLALNAQSR 486
HA A S LNG LE+VG ++VS + V T +S D+ GGL ++++ R
Sbjct: 300 HAMLALSQLNG-LELVGIPIRVSIASQGVQAAASTMAAPVESLGELDEGSGGLRMDSRGR 358
Query: 487 ALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMA 546
A LM +L G I + P+ + + A ++ + P +P P+ +
Sbjct: 359 AALMARL--AGQDKEIEKGFTIDPS---TGLPTTADAVKPIDVPGEALPLAAQPITQGVL 413
Query: 547 AEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYL 606
P+ C+LLKN+F+ A ETDP++ L+I DV+ EC K+G + H +VDK S GFVYL
Sbjct: 414 GPGSPIPTPCILLKNLFNAAEETDPEWWLDIAEDVKGECEKFGEITHAFVDKDSQGFVYL 473
Query: 607 RFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+F T ++ AQ+A+H RWFA R I+A F E Y+ F
Sbjct: 474 KFVDTASSTRAQQALHARWFAGRKIAAEFQFAEVYDGHF 512
>gi|198422099|ref|XP_002129220.1| PREDICTED: similar to RNA binding motif protein 39 [Ciona
intestinalis]
Length = 465
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/334 (38%), Positives = 188/334 (56%), Gaps = 41/334 (12%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN-LVQSNTSAGGTATGPYGAIDRKL 380
Y+EF D+ S+P+A+ LSGQ LLG P++V+P+++EKN + + S A GP KL
Sbjct: 149 YVEFKDLESIPLALGLSGQKLLGVPIVVQPTQSEKNKIAAAQLSLQKAALGP-----TKL 203
Query: 381 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 440
YVG+LH N+TE ++ +F PFG VE VQ+ D + G +G+GF+ FA+ E AK A LN
Sbjct: 204 YVGSLHENITEEMIKGIFSPFGRVEQVQIIKD-DAGASRGYGFITFAEAECAKRALDQLN 262
Query: 441 GKLEIVGRTLKVSSV---TDHVGTQDTAAKSADFDDD--DGGGLALNAQSRALLMQKL-D 494
G EI G+ +K+++V TD Q A+ + D+D + G+ L R LM KL +
Sbjct: 263 G-FEIAGKPIKLNTVSYGTDMNAMQGLASGPSFLDNDAVERAGIDLGTTGRLQLMAKLAE 321
Query: 495 RTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSP- 553
TG+ A QQA+ L GQ +P AA G+P
Sbjct: 322 GTGLEVPSAA--------------QQALYL---GQS-------MGLGLPQSAAGTTGAPP 357
Query: 554 --SECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFEST 611
+ C L NMFDP ET +D EI+ DV EEC ++G V H++VDK+S G VY++ +S
Sbjct: 358 IATTCFQLSNMFDPLNETGSSWDKEIRDDVIEECQRHGAVYHVFVDKQSKGNVYVKCDSV 417
Query: 612 EAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
AAA++ A+H R+FA +I+A ++ +Y + F
Sbjct: 418 SAAANSVAALHGRYFAGNMITAAYVPVVNYHSLF 451
>gi|443921112|gb|ELU40879.1| splicing factor, CC1-like family protein [Rhizoctonia solani AG-1
IA]
Length = 399
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 137/433 (31%), Positives = 212/433 (48%), Gaps = 105/433 (24%)
Query: 209 VVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKA---GKVRDVRLIMDRNSRRSKGVG 265
V+E D + + R+VF Q+ + T RD+ FF G VRD R++ DR SRRSKG+G
Sbjct: 53 VIEEINDEDSEARSVFVSQLAARLTARDLGYFFEDKLGEGAVRDARIVTDRLSRRSKGIG 112
Query: 266 NAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEF 325
V ++ I+
Sbjct: 113 ---------------------------------------------------YVEFKNIDL 121
Query: 326 YDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTS---AGGTATGPYGAIDRKLYV 382
V AIALSG +++G P+M++ +E+E+N + ++S G + G++ +LYV
Sbjct: 122 -----VNKAIALSGTIVMGLPIMIQLTESERNKIGPSSSLHLPPGVSHPHAGSM--QLYV 174
Query: 383 GNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGK 442
G+LHFN+TE+ +R++FEPFG ++ V L D TG+ KG+ F+Q+ + E A+ A + G
Sbjct: 175 GSLHFNLTESDIRQVFEPFGELDFVDLHRDPATGKSKGYCFIQYKRPEDARMALEQMEG- 233
Query: 443 LEIVGRTLKVSSVTDH-VGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATS 501
E+ GR L+V++V D GT + D +D GG L N+ SR LMQKL RT
Sbjct: 234 FELAGRQLRVNTVHDKGQGTVRISTAPQDSLEDTGGVLN-NSTSRHQLMQKLARTE---- 288
Query: 502 IAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKN 561
P+ N + + + I P + S C+LL+N
Sbjct: 289 -------QPSKNNTMLMKSNI------------PQTLS--------------SRCVLLRN 315
Query: 562 MFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRA 620
MFDP ET+ D+D ++ DV EC KYG+V + V+K S G +Y++FES E+A A +
Sbjct: 316 MFDPDEETERDWDKDLADDVRGECEEKYGKVLDLKVEKESEGEIYIKFESVESAEKAIKG 375
Query: 621 MHMRWFARRLISA 633
++ RWF + ++A
Sbjct: 376 LNGRWFGGKQVTA 388
>gi|340370502|ref|XP_003383785.1| PREDICTED: RNA-binding protein 39-like [Amphimedon queenslandica]
Length = 497
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 146/469 (31%), Positives = 212/469 (45%), Gaps = 101/469 (21%)
Query: 179 ERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVY 238
+++ER+R+ + S + + ++ P D RD RT+ Q+ K T RD+
Sbjct: 114 HKDKERDRDRNSPPSVAQPIGSYKRQRSPDLEPPSVD--RDNRTIMCMQLSAKVTNRDLE 171
Query: 239 EFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGM 298
+FF +AG VRDV +I DR SRRSKG I + E
Sbjct: 172 DFFMRAGVVRDVHIIADRQSRRSKG------------------------IAYVEFQEESS 207
Query: 299 VFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNL 358
VF L V +P+ I QP M AEKN
Sbjct: 208 VFTALS------------------FSGQKVHGIPIMI---------QPTM-----AEKNR 235
Query: 359 VQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQC 418
+ + A GP +KLYVG+LH+N+TE L+ +F PFG VE V + D T
Sbjct: 236 LAAAAENLKKAEGP-----KKLYVGSLHYNITEDMLQGIFSPFGNVERVSIMRDTATNVS 290
Query: 419 KGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDD--DDG 476
+G+ FV+F + A+ A + LNG E+ GR +KV + GT DT+ + D D D
Sbjct: 291 RGYAFVEFRDSDSAERAMANLNG-FELAGRPMKV-----NYGTVDTSLVNIDSLDGEDMD 344
Query: 477 GGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPA 536
G+ + QSR LM KL +A + +S+P V VP P
Sbjct: 345 VGVGMTPQSRVALMHKL---------------------AAGHNADMSIPGV---QVPPPP 380
Query: 537 VTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYV 596
P +P S C ++ NMFDP+ ET D+D EI+ DV EEC K+G + HI+V
Sbjct: 381 FAVPTMPTCIT------SCCFVIGNMFDPSKETGSDWDKEIREDVLEECVKFGNIFHIHV 434
Query: 597 DKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
DK S G VY++ ++ + A++A + + R +A +I A + Y KF
Sbjct: 435 DKFSQGKVYIKSQTPQTASAAVGSFNGRRYAGNVIHAELVPENTYHLKF 483
>gi|353238006|emb|CCA69965.1| related to splicing factor HCC1 [Piriformospora indica DSM 11827]
Length = 543
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/330 (37%), Positives = 179/330 (54%), Gaps = 59/330 (17%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQS----NTSAGGTAT--GPYGA 375
Y+E + V AIAL+G +++G P+ V+ +EAE+N + S N G TAT GP
Sbjct: 248 YVELRSLDLVSKAIALTGTVVMGLPIKVQLTEAERNRIHSGDLLNLPPGVTATSHGPM-- 305
Query: 376 IDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAA 435
+LYVG+LHF +TE +++++FEPFG +E V L D TG+ KG+ F+Q+ + E AK A
Sbjct: 306 ---QLYVGSLHFQLTEEEIKQVFEPFGELEFVDLHRDPATGRSKGYCFIQYRRPEDAKMA 362
Query: 436 QSALNGKLEIVGRTLKVSSVTDH-------VGTQDTAAKSADFDDDDGGGLALNAQSRAL 488
++G E+ GR L+V++V + VG A + D+GGG LNA SR
Sbjct: 363 LEQMDG-FELAGRQLRVNTVHEKGVAAPGGVGMSLRAMGNTAESLDEGGG-NLNAVSRQA 420
Query: 489 LMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAE 548
LMQKL RT +P +P+P V+ P I + E
Sbjct: 421 LMQKLART-------------------------------NEPQIPLP-VSGPKINIKSQE 448
Query: 549 FIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKY-GRVKHIYVDKRSAGFVYL 606
+ C+LLKN FDPA ETDPD+D +Q DV EC SK+ GRV+ I V+K S G +Y+
Sbjct: 449 -----TRCILLKNAFDPAEETDPDWDKNLQEDVVAECESKFQGRVEKIVVEKDSKGEIYI 503
Query: 607 RFESTEAAASAQRAMHMRWFARRLISAIFM 636
+ +S + A A + RWF R ISA ++
Sbjct: 504 QCDSIDMAKRAVANLDGRWFGGRQISASYI 533
>gi|412993528|emb|CCO14039.1| predicted protein [Bathycoccus prasinos]
Length = 641
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 126/364 (34%), Positives = 176/364 (48%), Gaps = 57/364 (15%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA--GGTATGPYGAIDRK 379
Y+EF D S+P A+ L+G+ L GQ VMVK SEAEKN+ A G T G G D
Sbjct: 295 YVEFQDKSSIPKALELTGETLRGQKVMVKHSEAEKNIAWEAEQAAKGVTGKGKRGNGDGT 354
Query: 380 -------LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHA 432
L+V LH + E ++ +FEPFG ++ +++ D GQ G G VQ+ + HA
Sbjct: 355 QQSGPCALFVAGLHEGLAEEDVKAVFEPFGALDAIEISRD-GNGQSNGHGIVQYREWSHA 413
Query: 433 KAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFD-------------------- 472
A S LNG LE+VG+ LK+S G ++ +
Sbjct: 414 MLAVSQLNG-LELVGQALKISVAAGQGGAKNDNKNRNNDRSGGGDVGGGGGGGEEDDDDR 472
Query: 473 -----DDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVV 527
DD ++A RA LMQKL G AT+I A+ + + A+ +
Sbjct: 473 VGGQMDDTATYAKMDAAKRAELMQKL-AGGDATTIG-------AIPTATLTHNAVKIKTK 524
Query: 528 GQPAVPVPAVT----APVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEE 583
+ + +T P P P++C+LLKN+FDPA ETD ++ L+I+ DV+
Sbjct: 525 EEEKRELIMMTQGFFGPSSP--------IPTKCVLLKNLFDPAEETDEEWWLDIEEDVKG 576
Query: 584 ECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYE 642
E SKYG H +VDK + GF YL+F+ EAA AQ ++ RWFA R I F E Y
Sbjct: 577 EVSKYGECVHAHVDKENPYGFCYLKFDDVEAAKKAQFGLNNRWFAGRSIICDFQFVEPYN 636
Query: 643 AKFK 646
FK
Sbjct: 637 KHFK 640
>gi|302852020|ref|XP_002957532.1| hypothetical protein VOLCADRAFT_84128 [Volvox carteri f.
nagariensis]
gi|300257174|gb|EFJ41426.1| hypothetical protein VOLCADRAFT_84128 [Volvox carteri f.
nagariensis]
Length = 386
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 161/454 (35%), Positives = 218/454 (48%), Gaps = 92/454 (20%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNT 276
ER RT FAY + LKA ERD+Y+ FSK GKV D++LI D+ ++RSKG
Sbjct: 2 ERSTRTAFAYNLNLKADERDIYQLFSKVGKVVDIKLITDKTTKRSKGFA----------- 50
Query: 277 LHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIA 336
I+F V EV L G TV +
Sbjct: 51 ----------YIEFSKVEEVIAAVALTG----------TVFM------------------ 72
Query: 337 LSGQLLLGQPVMVKPSEAEKNLVQSNT-------SAGGTA---TGPYGAIDRKLYVGNLH 386
GQ + MVK SE EKNL +T +AG T T P G KLYV NL+
Sbjct: 73 --GQAI-----MVKSSEHEKNLAWVSTYLASLLGAAGVTGPNDTLPVGPC--KLYVANLN 123
Query: 387 FNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIV 446
+ E +++LF PFG ++ VQL D TG+ +G+G+V +A + A A NG++ +
Sbjct: 124 AAIAEADVQQLFAPFGQIDNVQLVRD-ATGRSQGYGYVTYANVLDATKAVEHWNGRV-VA 181
Query: 447 GRTLKVS-----SVTDHVGTQDTA----AKSADFDDDDG-GGLALNAQSRALLMQKLDRT 496
G LKVS S G T + + D+++ GGL L + R LM +L +
Sbjct: 182 GSALKVSVSSKGSCIRFFGITRTVLLLRCRVGELDEEEARGGLKLTSDRRQALMARLASS 241
Query: 497 GIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSEC 556
+A +L V P+V AV ++ P + + +V P P P+ C
Sbjct: 242 AGLQPVAPALPV-PSVPALAVAPAVLAGPKLDPSLGLIQSVLGPASP--------IPTPC 292
Query: 557 LLLKNMFDPAM---ETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEA 613
LL+KNMFDPA E D+ EI DV++ECSKYG V HI+VDK S G VYL+ S EA
Sbjct: 293 LLIKNMFDPAAAQEEMGQDWAEEIAQDVQDECSKYGAVVHIHVDKSSKGCVYLKCGSVEA 352
Query: 614 AASAQRAMHMRWFARRLISAIFMKPEDYEAKFKS 647
A++AQ AM+ RWFA R ++ F Y A FK
Sbjct: 353 ASAAQAAMNGRWFAGRQLAVEFQFLAPYNAHFKC 386
>gi|221041852|dbj|BAH12603.1| unnamed protein product [Homo sapiens]
Length = 337
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 129/318 (40%), Positives = 178/318 (55%), Gaps = 36/318 (11%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 379
Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP +
Sbjct: 41 YVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM-----R 94
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A L
Sbjct: 95 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 154
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DRT 496
NG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L + T
Sbjct: 155 NG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGT 210
Query: 497 GI--------ATSIAGSLGVAPAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVIPNMAA 547
G+ A ++GSL S V I L + Q A + +A
Sbjct: 211 GLQIPPAAQQALQMSGSLAFGAVAEFSFV----IDLQTRLSQQTEASALAAAASVQPLA- 265
Query: 548 EFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYL 606
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY+
Sbjct: 266 ------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYV 319
Query: 607 RFESTEAAASAQRAMHMR 624
+ S AA +A A+H R
Sbjct: 320 KCPSIAAAIAAVNALHGR 337
>gi|393247915|gb|EJD55422.1| splicing factor, CC1-like protein [Auricularia delicata TFB-10046
SS5]
Length = 581
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/319 (36%), Positives = 175/319 (54%), Gaps = 47/319 (14%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQS--NTSAGGTATGPYGAIDRK 379
Y+E + V A+ LSG +++G P+MV+ +EAE+N V + N + + P G +
Sbjct: 297 YVELRSIDLVTKALDLSGTIVMGLPIMVQLTEAERNRVHAGENLNLPPGVSAPQGGA-MQ 355
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE ++++FEPFG ++ V L D TG+ KG+ FVQ+ + E AK A +
Sbjct: 356 LYVGSLHFNLTEQDIKQVFEPFGELDFVDLHRDPGTGRSKGYAFVQYKRAEDAKMALEQM 415
Query: 440 NGKLEIVGRTLKVSSVTDH-VGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGI 498
+G E+ GRTL+V+SV + V ++T + D +D GGG LNA SR LMQKL R
Sbjct: 416 DG-FELAGRTLRVNSVNEKGVAVRNTT--TIDSLEDSGGG-NLNAASRQALMQKLAR--- 468
Query: 499 ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLL 558
I P QP IP + + +L
Sbjct: 469 -----------------------IDPPKSSQPEA------RKHIPQNQS------TRSVL 493
Query: 559 LKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASA 617
L NMFDP ET+PD+D ++ DV+ EC SKYG V + ++K S G +Y++FES ++A A
Sbjct: 494 LLNMFDPDEETEPDWDKDLADDVKGECASKYGPVTALKIEKDSQGEIYVQFESVDSAKKA 553
Query: 618 QRAMHMRWFARRLISAIFM 636
+++ RWF R ++A F+
Sbjct: 554 VDSLNGRWFGGRQVNARFI 572
>gi|428174818|gb|EKX43711.1| hypothetical protein GUITHDRAFT_163728 [Guillardia theta CCMP2712]
Length = 501
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/334 (38%), Positives = 181/334 (54%), Gaps = 43/334 (12%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID--RK 379
Y+EF A+ SGQLL G PV+V+ S+AEKN A A G +D K
Sbjct: 199 YVEFEKQEQCVAAVQKSGQLLCGFPVVVQASQAEKN------QAARLAAQVAGELDLPAK 252
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
L V NLH ++ E L+ LF PFG V V++ + E G+ G G V+F L+ A+ A + L
Sbjct: 253 LQVDNLHMDIAEDDLQTLFSPFGKVLSVRI--NKEHGRSTGKGVVEFKTLQDAQKAVAHL 310
Query: 440 NGKLEIVGRTLKV----SSVTDHVGTQDTAAKSAD--FDDDDGGGLALNAQSRALLMQKL 493
NG ++ G+ L V S+ + + G+ ++ A DD++ GG+ ++AQSR LMQKL
Sbjct: 311 NG-FDLAGKALNVRIIQSAGSGYTGSMSSSGGPATEMLDDNEIGGVHVSAQSRHSLMQKL 369
Query: 494 DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSP 553
R G + AV S ++ QP+ P A IPN ++ P
Sbjct: 370 AR--------GDAQLTSAVPNSLMSGAL-------QPSKPANA-----IPNGQSQ----P 405
Query: 554 SECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVD-KRSAGFVYLRFEST 611
S ++L NMFDPA ET+PDF +EIQ DV+EEC +K+GRV + D K G VY+RF+ST
Sbjct: 406 SVFMVLVNMFDPAKETEPDFHVEIQDDVKEECEAKFGRVIQVVADRKHPNGLVYVRFDST 465
Query: 612 EAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+ A AQ + R+FA + ISAI++ +EA
Sbjct: 466 DTAQKAQAGLQGRFFAGKQISAIYLAQGTFEANI 499
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 26/102 (25%)
Query: 163 RRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRT 222
R + E+E L E ++ + + +RD RT
Sbjct: 122 RYDETYRYEKEIPDRLPAE--------------------------QIAKDDEGFDRDMRT 155
Query: 223 VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGV 264
+F Q+ KA ERD+++FFS+AGKV DVR+I D +RRSKG+
Sbjct: 156 IFVAQVARKADERDLFQFFSEAGKVVDVRIIKDTQTRRSKGI 197
>gi|452845447|gb|EME47380.1| hypothetical protein DOTSEDRAFT_69347 [Dothistroma septosporum
NZE10]
Length = 607
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/373 (32%), Positives = 174/373 (46%), Gaps = 86/373 (23%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF + SV AIAL+GQ LLG P++ + +EAEKN NT GTAT G +LY
Sbjct: 266 YVEFKEEESVQKAIALTGQKLLGIPIIAQLTEAEKNRQARNTE--GTATQSNGIPFHRLY 323
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VGN+HF++TE L+ +FEPFG +E VQL + E G+ KG+GFVQF AK A +NG
Sbjct: 324 VGNIHFSITEDDLKNVFEPFGELEFVQLQKE-EAGRSKGYGFVQFIDPTQAKEALEKMNG 382
Query: 442 KLEIVGRTLKVSSVTD------------------------------------HVGTQ--- 462
E+ GR ++V D H G
Sbjct: 383 -FELAGRPIRVGLGNDKFTPESTQSLLQRFGGGQANAHAQGSSFSGMGGRGAHAGGTGNF 441
Query: 463 --------DTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNG 514
D ++ DD D GG+ + SR LM+KL RT +AP
Sbjct: 442 DRTTARDVDKTGGASALDDTDVGGVNFSNYSRDALMRKLARTDEPEQK-----MAPKT-- 494
Query: 515 SAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFD 574
Q + PVV QP + C+LLKNM+D E+DP++
Sbjct: 495 -----QQVKKPVVEQPTA---------------------TRCVLLKNMYDQNTESDPNWQ 528
Query: 575 LEIQGDVEEECS-KYGRVKHIYVD-KRSAGFVYLRFESTEAAASAQRAMHMRWFARRLIS 632
E++ DV+ EC KYG+V HI + + G +Y++F+ + +A R ++ RWF +I+
Sbjct: 529 DELKDDVKSECDEKYGKVVHIGLALDNNDGEIYIKFDRVQGGENAIRGLNGRWFGGNMIT 588
Query: 633 AIFMKPEDYEAKF 645
A ++ Y F
Sbjct: 589 AQYVVDAVYHMNF 601
>gi|403281374|ref|XP_003932163.1| PREDICTED: RNA-binding protein 39 [Saimiri boliviensis boliviensis]
Length = 502
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 146/450 (32%), Positives = 207/450 (46%), Gaps = 103/450 (22%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 193 SKGIA---------------------YVEFVDVSSV------------------------ 207
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
P+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 208 -----------PLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 250
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 251 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 310
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 311 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 366
Query: 496 TGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSE 555
TG L + PA + +++ V + T AA ++
Sbjct: 367 TG--------LQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLATQ 418
Query: 556 CLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAA 615
C L NMF+P +++ + R G VY++ S AA
Sbjct: 419 CFQLSNMFNPQ-------------------TQWNNYHKPFCGYR--GNVYVKCPSIAAAI 457
Query: 616 SAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+A A+H RWFA ++I+A ++ Y F
Sbjct: 458 AAVNALHGRWFAGKMITAAYVPLPTYHNLF 487
>gi|430811846|emb|CCJ30702.1| unnamed protein product [Pneumocystis jirovecii]
Length = 486
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/339 (34%), Positives = 173/339 (51%), Gaps = 78/339 (23%)
Query: 342 LLGQPVMVKPSEAEKN---LVQSNTSAGG-TATGPYGAIDRKLYVGNLHFNMTETQLRKL 397
LLG P++V+ +EAEKN ++ S+GG + P+ +LYVGN+HFN+TE LR++
Sbjct: 190 LLGIPIIVQLTEAEKNRQAKAEAMLSSGGRQSDAPF----HRLYVGNIHFNLTEDDLRQI 245
Query: 398 FEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV----- 452
FEPFG +E VQL + +TG+ +G+GFVQ+ A+ A +NG E+ GR ++V
Sbjct: 246 FEPFGELEFVQLQKEPDTGRSRGYGFVQYRDPAQARDALEKMNG-FELAGRAIRVGLGND 304
Query: 453 -------SSV-------------------TDHVGTQDTAAKSADFDDDDGGGLALNAQSR 486
S+V T+ +G + S DD++ GG++ N SR
Sbjct: 305 KFTPESTSAVLARFSGFTGSAFENKNRGGTERIGGPRDGSSSVSLDDNEAGGVSFNNISR 364
Query: 487 ALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMA 546
LM+KL R SI G+A P P PAV
Sbjct: 365 DALMRKLAREEGKESI----GLA--------------------PPKPTPAVQM------- 393
Query: 547 AEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVY 605
S C+LLKNMF+P E+ ++ E++ DV+ EC +KYG+V HI+V++ S G VY
Sbjct: 394 ------TSRCVLLKNMFNPQEESGDNWIRELEDDVKAECENKYGKVLHIHVEENSPGDVY 447
Query: 606 LRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAK 644
++F++ A A + ++ RWF R ISA F+ Y AK
Sbjct: 448 IKFDNVVAGERAIQGLNGRWFGGRTISASFLIDAVYTAK 486
>gi|294462032|gb|ADE76571.1| unknown [Picea sitchensis]
Length = 203
Score = 176 bits (446), Expect = 3e-41, Method: Composition-based stats.
Identities = 94/192 (48%), Positives = 125/192 (65%), Gaps = 36/192 (18%)
Query: 479 LALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVP-VPAV 537
++LNA+SRA+LMQKLDR+GIATS GS+ P N S +SLP P VP + ++
Sbjct: 19 ISLNARSRAILMQKLDRSGIATS--GSVAPVPLANPS------LSLP---GPTVPGMSSL 67
Query: 538 TAPVIPNMAA------------------------EFIGSPSECLLLKNMFDPAMETDPDF 573
AP++P++ + IG P++CLLLKNMFDP ET+PDF
Sbjct: 68 VAPLVPSLGPTTMSGYMGLHGSAVAAPAVAAPVMDPIGVPNDCLLLKNMFDPNNETEPDF 127
Query: 574 DLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
DL+I+ DV++ECSK+G V+HI+VDK SAG VYLRF+S +A AQRA+H RWFA ++I+A
Sbjct: 128 DLDIKEDVQDECSKFGAVRHIFVDKHSAGHVYLRFDSATSAIGAQRALHGRWFAGKMITA 187
Query: 634 IFMKPEDYEAKF 645
FM YEAKF
Sbjct: 188 TFMPSYTYEAKF 199
>gi|156099298|ref|XP_001615651.1| splicing factor [Plasmodium vivax Sal-1]
gi|148804525|gb|EDL45924.1| splicing factor, putative [Plasmodium vivax]
Length = 1016
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 148/467 (31%), Positives = 219/467 (46%), Gaps = 116/467 (24%)
Query: 218 RDQRTVFAYQMPLKATERDVYEFFSK-AGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNT 276
RD TV + LKA ERD+YEFFS+ AGKVRD++ I D+ S +SKG
Sbjct: 622 RDDLTVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKG------------- 668
Query: 277 LHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIA 336
V V F D L +
Sbjct: 669 -------------------VAYVEFYTQDSVVKAL------------------------S 685
Query: 337 LSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNL---HFNMTETQ 393
+G +L +P+ ++ S+AEKN ++ +A P I KLY+G L N+TE +
Sbjct: 686 ANGYMLKNRPIKIQSSQAEKN--RAAKAAKHQPIDP-NDIPIKLYIGGLVGPLGNITEVE 742
Query: 394 LRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVS 453
L++LF PFG + V++ D TG+CKGFGF+QF + A A LNG +EI GR LKVS
Sbjct: 743 LKQLFNPFGEILEVEIHRDPYTGKCKGFGFIQFFRASEAIEAMGVLNG-MEIAGRELKVS 801
Query: 454 SVTDH---VGTQDTA---------AKSADFDD--------------DDGGGLALNAQSRA 487
D + ++ A AK A ++ DDGGGL A S+
Sbjct: 802 FAQDSKYILASEKEAKEKILAQLLAKKAKAEEKVEEPDNEKIDNDDDDGGGLIAGAGSKI 861
Query: 488 LLMQKLDR-----TGIATSIA-GSLGVAPAVNGSAVNQQAISLPVVGQP-AVPVPAVTAP 540
LMQKL R +GI++ A G+ + A +A AI + G P A P+
Sbjct: 862 ALMQKLQRDTVLDSGISSQFATGANAIMHAAPLAAAQSNAI---MHGAPLAAAQPSALNN 918
Query: 541 VIPNMAAEFIGSPSECLLLKNMFDP---AMETDPDFDLEIQGDVEEECSKYGRVKHIYVD 597
+ PN L+L NMF P ++ +DPDF +I DV+EECSKYG + I++D
Sbjct: 919 ITPN------------LVLCNMFSPNDESIGSDPDFFTDIIEDVKEECSKYGSIAKIWLD 966
Query: 598 KRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEA 643
++ G +Y+++ + + + A + ++ R+F LISA F+ E +++
Sbjct: 967 SKNIDGKIYIKYATPDESLKAFQFLNGRYFGGSLISAYFITAEVWDS 1013
>gi|402217675|gb|EJT97754.1| splicing factor CC1-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 640
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/325 (34%), Positives = 178/325 (54%), Gaps = 54/325 (16%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA----GGTATGPYGAID 377
Y+E + V AIAL+G +++G P+MV+ +E+E+N V ++ S+ G P G++
Sbjct: 351 YVELSSIDMVSRAIALTGTIVMGLPIMVQLTESERNKVAASGSSMHLPPGVTAPPPGSM- 409
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 437
+LYVG+LHFN+TE+ ++++FEPFG +E V L D TG+ KGF FVQ+ + E A+ A
Sbjct: 410 -QLYVGSLHFNLTESDVKQVFEPFGELEFVDLHRDPLTGRSKGFAFVQYKRSEDARMALQ 468
Query: 438 ALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTG 497
+++G ++ GR LKV++V + G ++S D+ GG L NA SR LMQKL R
Sbjct: 469 SMDG-FDLAGRQLKVNTVHEKGGAIRYQSQSDSLDESGGGNL--NAASRQALMQKLAR-- 523
Query: 498 IATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPV-IPNMAAEFIGSPSEC 556
+ P P PA++ +P A + S
Sbjct: 524 ----------IEP----------------------PKPAISPMASLPKAAMQ-----SRS 546
Query: 557 LLLKNMF-DPAME---TDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFEST 611
+LL+NMF +P +E P++ E+ DV++EC KYG V I ++ S G +YL+F+S
Sbjct: 547 VLLRNMFKEPELEEKENGPNWAKELTDDVKQECEDKYGLVDFIKLEPDSQGEMYLKFKSI 606
Query: 612 EAAASAQRAMHMRWFARRLISAIFM 636
EAA+ A ++ R+F + I A F+
Sbjct: 607 EAASKAIEGLNGRYFGGQPIQATFI 631
>gi|425770690|gb|EKV09156.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum Pd1]
gi|425772037|gb|EKV10463.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum PHI26]
Length = 556
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 124/361 (34%), Positives = 177/361 (49%), Gaps = 82/361 (22%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN--TSAGGTATGPYGAIDRK 379
Y+EF + SV AI L+GQ+LLG P++ + +EAEKN N +AG T P+ +
Sbjct: 211 YVEFKNEESVAAAIRLTGQMLLGIPIIAQLTEAEKNRQARNPEATAGNQHTAPF----HR 266
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVGN+HF++TE L +FEPFG +E VQL D ETG+ KG+ FVQFA E A+ A +
Sbjct: 267 LYVGNVHFSITEDDLTNVFEPFGELEFVQLQKD-ETGRSKGYAFVQFANPEQARDALEKM 325
Query: 440 NGKLEIVGRTLKV--------------------------------------------SSV 455
NG E+ GR ++V S+
Sbjct: 326 NG-FELAGRAIRVGLGNDKFTPDAHANRPSGASSTNQSNFQGSSFSGQGGRGVQAGGSNN 384
Query: 456 TDHVGTQDT--AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVN 513
D G ++T A ++ DD D G+ N SR LM+KL RT A P+V+
Sbjct: 385 FDRAGGRETEKGAGASALDDTDVAGVNFNNYSRDALMRKLARTDDAQ---------PSVD 435
Query: 514 GSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDF 573
++Q P +P+ NMA S C+LL+NMFDPA ET +
Sbjct: 436 ----DRQKFLRPKTETKPLPINV-------NMA-------SRCVLLRNMFDPAEETGEAW 477
Query: 574 DLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLIS 632
E++ DV EC KYG V HI +D S G +YL+F+ + +A + ++ R+F + I+
Sbjct: 478 IKELEEDVRSECEEKYGHVVHISLDVSSQGDIYLKFDRVQGGENAIKGLNGRYFGGKQIT 537
Query: 633 A 633
A
Sbjct: 538 A 538
>gi|452986581|gb|EME86337.1| hypothetical protein MYCFIDRAFT_97432, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 540
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 119/348 (34%), Positives = 182/348 (52%), Gaps = 36/348 (10%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF + SV AI L+GQ LLG P++ + +EAEKN NT GTAT G +LY
Sbjct: 203 YVEFKEEESVQKAIQLTGQKLLGIPIIAQLTEAEKNRQARNTE--GTATQSNGIPFHRLY 260
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VGN+HF++TE L+ +FEPFG +E VQL + E G+ KG+GFVQF AK A +NG
Sbjct: 261 VGNIHFSITEDDLKNVFEPFGELEFVQLQKE-EAGRSKGYGFVQFIDPAQAKEALEKMNG 319
Query: 442 KLEIVGRTLKV------------SSVTDHVGTQDTAAKSADFDDDDG-GGLALNAQSRAL 488
E+ GR ++V +S+ G Q A + G GG +A
Sbjct: 320 -FELAGRPIRVGLGNDKFTPESTNSLLQRFGAQAQQAHNFQGSQFSGMGGRGAHAGGTGN 378
Query: 489 L----MQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAI--SLPVVGQP---AVPVPAVTA 539
+ +D+TG A+++ + VN S ++ A+ L +P P
Sbjct: 379 FDRPAARDVDKTGGASALDDT--DVGGVNFSNYSRDALMRKLARTDEPEQKMAPKTQQKK 436
Query: 540 PVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVD- 597
PV+ AA + C+L+KNM+D ETDP++ E++ DV+ EC +KYG+V HI +
Sbjct: 437 PVVEQAAA------TRCVLIKNMYDQNTETDPNWQKELKEDVKGECEAKYGKVVHIDLAL 490
Query: 598 KRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+ G VY++F+ + +A + ++ RWF R+++A ++ Y F
Sbjct: 491 DNNDGEVYVKFDRVQGGENAFKGLNGRWFGGRMLTAQYVVDAVYHMNF 538
>gi|430811054|emb|CCJ31450.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 484
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 182/372 (48%), Gaps = 94/372 (25%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN---LVQSNTSAGG-TATGPYGAID 377
Y+EF D SV AI ++GQ LLG P++V+ +EAEKN ++ S+GG + P+
Sbjct: 157 YVEFRDEESVHKAINMTGQRLLGIPIIVQLTEAEKNRQAKAEAMLSSGGRQSDAPF---- 212
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 437
+LYVGN+HFN+TE LR++FEPFG +E VQL + +TG+ +G+GFVQ A+ A
Sbjct: 213 HRLYVGNIHFNLTEDDLRQIFEPFGELEFVQLQKEPDTGRSRGYGFVQ--DPAQARDALE 270
Query: 438 ALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADF-------------------------- 471
+NG E+ GR ++V D + T+A A F
Sbjct: 271 KMNG-FELAGRAIRVGLGNDKFTPESTSAVLARFSGFTGSAFENKNRGGTERIGGPRDGS 329
Query: 472 -----DDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPV 526
DD++ GG++ N SR LM+KL R SI G+A
Sbjct: 330 SSVSLDDNEAGGVSFNNISRDALMRKLAREEGKESI----GLA----------------- 368
Query: 527 VGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPA--------------METDPD 572
P P PAV S C+LLKNMF+P E+ +
Sbjct: 369 ---PPKPTPAVQM-------------TSRCVLLKNMFNPQEYVFVLVFKFLIFFRESGDN 412
Query: 573 FDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLI 631
+ E++ DV+ EC +KYG+V HI+V++ S G VY++F++ A A + ++ RWF R I
Sbjct: 413 WIRELEDDVKAECENKYGKVLHIHVEENSPGDVYIKFDNVVAGERAIQGLNGRWFGGRTI 472
Query: 632 SAIFMKPEDYEA 643
SA F+ Y A
Sbjct: 473 SASFLIDAVYTA 484
>gi|255941952|ref|XP_002561745.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586368|emb|CAP94118.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 562
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 123/360 (34%), Positives = 174/360 (48%), Gaps = 81/360 (22%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNT--SAGGTATGPYGAIDRK 379
Y+EF + SV AI L+GQ+LLG P++ + +EAEKN NT ++G T P+ +
Sbjct: 218 YVEFKNEESVAAAIRLTGQMLLGIPIIAQLTEAEKNRQARNTESTSGHHHTAPF----HR 273
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVGN+HF++TE L +FEPFG +E VQL D ETG+ KG+ FVQFA E A+ A +
Sbjct: 274 LYVGNVHFSITEEDLTNVFEPFGELEFVQLQKD-ETGRSKGYAFVQFANPEQARDALEKM 332
Query: 440 NGKLEIVGRTLKVSSVTDHV------------------------------GTQDTAAKSA 469
NG E+ GR ++V D G Q + S
Sbjct: 333 NG-FELAGRAIRVGLGNDKFTPDTHANRPSGASTNQPNFQGSSFSGQGGRGVQAGGSNSF 391
Query: 470 D---------------FDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNG 514
D DD D G+ N SR LM+KL RT P+V+
Sbjct: 392 DRAGGREPEKGAGASALDDTDVAGVNFNNYSRDALMRKLARTDDPQ---------PSVD- 441
Query: 515 SAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFD 574
++Q P +P+ NMA S C+LL+NMFDPA ET ++
Sbjct: 442 ---DRQKFLRPKTETKPLPINV-------NMA-------SRCVLLRNMFDPAEETGENWV 484
Query: 575 LEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
E++ DV EC KYG V HI +D S G +YL+F+ + +A + ++ R+F + I+A
Sbjct: 485 KELEEDVRSECEKKYGHVVHISLDASSQGDIYLKFDRVQGGENAIKGLNGRYFGGKQITA 544
>gi|156064869|ref|XP_001598356.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980]
gi|154691304|gb|EDN91042.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 570
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 123/373 (32%), Positives = 179/373 (47%), Gaps = 79/373 (21%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF + SVP AI L+GQ LLG P++ + +EAEKN N A T + P +LY
Sbjct: 222 YVEFKNEESVPAAIQLTGQRLLGIPIIAQLTEAEKNRQVRNPEA--TTSNPNQIPFHRLY 279
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VGN+HF++TE L+ +FEPFG +E VQL + E G+ +G+GFVQF A+ A +NG
Sbjct: 280 VGNIHFSITEADLQNVFEPFGELEFVQLQKE-EQGRSRGYGFVQFRDPNQAREALEKMNG 338
Query: 442 KLEIVGRTLKV------------------------------SSVTDHVGTQDTAAKSADF 471
++ GR ++V S+ + G TAA ++F
Sbjct: 339 -FDLAGRPIRVGLGNDKFTPESTASLLQRFHGQSHQQQFQGSAFSGAGGRGPTAAGGSNF 397
Query: 472 ------------------DDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVN 513
DD D GG+ N SR LM+KL RT T+ A
Sbjct: 398 DRAGGRDNDKGAGGASALDDTDVGGVNFNNYSRDALMRKLARTDDTTTAANH-------- 449
Query: 514 GSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDF 573
++ +S P A+PV NMA S C++LKNMFDP E ++
Sbjct: 450 ----ERREVSKPKTETKALPVNV-------NMA-------SRCVVLKNMFDPTEEDGENW 491
Query: 574 DLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLIS 632
+ E++ DV E KYG V HI +D S G +YL+F+ + +A + ++ R+F R+IS
Sbjct: 492 EKELEDDVRAEAEEKYGHVVHIALDPNSQGDIYLKFDRVQGGENAIKGLNGRYFGGRMIS 551
Query: 633 AIFMKPEDYEAKF 645
A + Y + F
Sbjct: 552 ATPVVDAVYSSLF 564
>gi|154322639|ref|XP_001560634.1| hypothetical protein BC1G_00662 [Botryotinia fuckeliana B05.10]
gi|347837181|emb|CCD51753.1| hypothetical protein [Botryotinia fuckeliana]
Length = 570
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 123/373 (32%), Positives = 179/373 (47%), Gaps = 79/373 (21%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF + SVP AI L+GQ LLG P++ + +EAEKN N A T + P +LY
Sbjct: 222 YVEFKNEESVPAAIQLTGQRLLGIPIIAQLTEAEKNRQVRNPEA--TTSNPNQIPFHRLY 279
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VGN+HF++TE+ L+ +FEPFG +E VQL + E G+ +G+GFVQF A+ A +NG
Sbjct: 280 VGNIHFSITESDLQNVFEPFGELEFVQLQKE-EQGRSRGYGFVQFRDPNQAREALEKMNG 338
Query: 442 KLEIVGRTLKV------------------------------SSVTDHVGTQDTAAKSADF 471
++ GR ++V S+ + G TAA ++F
Sbjct: 339 -FDLAGRPIRVGLGNDKFTPESTASLLQRFHGQSHQQQFQGSAFSGAGGRGPTAAGGSNF 397
Query: 472 ------------------DDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVN 513
DD D GG+ N SR LM+KL RT T A
Sbjct: 398 DRAGGRDNDKGAGGASALDDTDVGGVNFNNYSRDALMRKLARTDDTTVAANH-------- 449
Query: 514 GSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDF 573
++ +S P A+PV NMA S C++LKNMFDP E ++
Sbjct: 450 ----ERREVSKPKTETKALPVNV-------NMA-------SRCVVLKNMFDPTEEDGENW 491
Query: 574 DLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLIS 632
+ E++ DV E KYG V HI +D S G +YL+F+ + +A + ++ R+F R+IS
Sbjct: 492 EKELEDDVRAEAEEKYGHVVHIALDPNSQGDIYLKFDRVQGGENAIKGLNGRYFGGRMIS 551
Query: 633 AIFMKPEDYEAKF 645
A + Y + F
Sbjct: 552 ATPVVDAVYSSLF 564
>gi|400598297|gb|EJP66014.1| CC1-like family splicing factor [Beauveria bassiana ARSEF 2860]
Length = 556
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 123/356 (34%), Positives = 169/356 (47%), Gaps = 76/356 (21%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF D SV A+ L+GQ LLG PV+V+ +EAEKN NT AGG P +LY
Sbjct: 215 YVEFKDEDSVATALQLTGQKLLGIPVIVQVTEAEKNRQARNTEAGGPH--PNHVPFHRLY 272
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VGN+HFN+TE LR +FEPFG +E VQL D E+ + +G+GFVQF A+ A +NG
Sbjct: 273 VGNIHFNVTEEDLRAVFEPFGELEFVQLQKD-ESDRSRGYGFVQFRDATQAREALEKMNG 331
Query: 442 KLEIVGRTLKVSSVTDHVGTQDTA------------------------------------ 465
++ GR ++V D + TA
Sbjct: 332 -FDLAGRPIRVGLGNDKFTPESTANMLQRFSGQNSSNQQGSSFSGSGGRGGQNSNFDRAG 390
Query: 466 -------AKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVN 518
++ DD D GG+ N SR LM+KL RT S GS
Sbjct: 391 ARDSEKTGGASALDDTDVGGVNFNNYSRDALMRKLARTD--ESNKGS------------E 436
Query: 519 QQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQ 578
++ + P + +PV TA S C++L NMF+P E D+ E++
Sbjct: 437 ERPVLKPRTEKKPLPVNVNTA--------------SRCVVLHNMFNPDEEEGDDWVKELE 482
Query: 579 GDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
DV +E KYGRV HI VD S G +YL+FE + +A R ++ R+F R+I A
Sbjct: 483 DDVRQEAEDKYGRVVHISVDPNSKGDIYLKFEKVQGGENAIRGLNGRYFGGRMIDA 538
>gi|212531765|ref|XP_002146039.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
gi|210071403|gb|EEA25492.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
Length = 562
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 173/365 (47%), Gaps = 87/365 (23%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN--TSAGGTATGPYGAIDRK 379
Y+EF D SVP+AI L+GQ LLG P++ + +EAEKN N S+G +A+ P+ +
Sbjct: 214 YVEFKDESSVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEASSGQSASAPF----HR 269
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVGN+HF++TE ++ +FEPFG +E VQL D ETG+ +G+GFVQF A+ A +
Sbjct: 270 LYVGNIHFSITENDIQNVFEPFGELEFVQLQKD-ETGRSRGYGFVQFRDPNQAREALEKM 328
Query: 440 NGKLEIVGRTLKVS---------------------------------------------- 453
NG ++ GR ++V
Sbjct: 329 NG-FDLAGRPIRVGLGNDKFTPESTANLLQRFQGREQNQQFQGSLFSGHGGRGAQAGGTP 387
Query: 454 SVTDHVGTQDT---AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAP 510
S D G +DT ++ DD D G+ N SR LM+KL RT
Sbjct: 388 SNFDRAGGRDTDKGTGGASALDDTDVAGVNFNNYSRDALMRKLART-------------- 433
Query: 511 AVNGSAVNQQAISLPVVGQPAVP-VPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMET 569
++ S QP P PV NMA S C+LL+NMFDPA E
Sbjct: 434 -------DEPEPSADEKSQPLRPKTEPKPLPVNVNMA-------SRCVLLRNMFDPAEEE 479
Query: 570 DPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFAR 628
+ E++ DV EC KYG V HI +D S G +YL+F+ + +A + ++ R+F
Sbjct: 480 GEAWIKELEDDVRAECEEKYGHVVHISLDPNSQGDIYLKFDRVQGGENAIKGLNGRFFGG 539
Query: 629 RLISA 633
R ISA
Sbjct: 540 RQISA 544
>gi|443896055|dbj|GAC73399.1| transcriptional coactivator CAPER [Pseudozyma antarctica T-34]
Length = 662
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 164/557 (29%), Positives = 247/557 (44%), Gaps = 77/557 (13%)
Query: 117 EKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRER-----ERESE 171
E E ER R R R + R+ +RDG + R R S + S SSR R+R E
Sbjct: 154 EDEDERARERRCLRSERRDDDRDGHSSAGDRHRPSPAPS---SSRGDRDRYDSYYEDRRY 210
Query: 172 RERELELERERERERELRERERDLEMRESRR---YKEKKEVVEPEADPERDQRTVFAYQM 228
R R E R + PE + + + R+VF Q+
Sbjct: 211 DRRGDRGPHNRGGRYEDDSRRSSRRRGRYDSPAASARSRRTPSPEIN-DYEDRSVFCSQL 269
Query: 229 PLKATERDVYEFFSKA---GKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSC 285
+ +RD+ EFF + G V+DVR++MDR +RRSKGVG L I
Sbjct: 270 SARLGQRDLGEFFEEHLGEGAVQDVRIVMDRVTRRSKGVGYVEFA---ARELVPKAIELT 326
Query: 286 CVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQ 345
+ F G+ + + P V+ + + + P L + L
Sbjct: 327 GKVLF------GIPIVVQRTDAGRNGPPPISAVAPHGVASHPALGGPH---LDARALANV 377
Query: 346 PVMVKPSEAEKNL-VQSNTSAGGTATGPYGAI---DRKLYVGNLHFNMTETQLRKLFEPF 401
P+ ++ +A + + N G A P + + +LYVG+LHF++T+ ++ +FEPF
Sbjct: 378 PMPMQYHQAGVPIHLNVNAPPGPRAMRPGPNMPNTEARLYVGSLHFSLTDENVKAVFEPF 437
Query: 402 GPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSV------ 455
G +E V L + TG+ KGF F+QF + A+ A A+NG E+ GR ++V +V
Sbjct: 438 GEIEYVDLHREPGTGKSKGFCFIQFKHADDARKAHEAMNG-FELAGRAIRVGNVNAKGSG 496
Query: 456 TDHVGTQDTAAKSADFDD------DDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVA 509
+ ++G ++S DDGGG LN + RA LMQKL R
Sbjct: 497 SSYMGGPGPNSQSGGHLPQLTSAFDDGGGAGLNPERRAALMQKLARNN-----------E 545
Query: 510 PAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMET 569
P+ S N P +P T S LLLKNMFDPA ET
Sbjct: 546 PSPAASDANTATQERPAG------IPEAT---------------STSLLLKNMFDPAEET 584
Query: 570 DPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFAR 628
+ D+D ++ DV++EC +KYG V I+V+K SAG +YL F +A+ A ++ R+F
Sbjct: 585 EADWDKDLAEDVKDECQAKYGPVTRIHVEKESAGEIYLTFADLDASRKALDGLNGRFFGG 644
Query: 629 RLISAIFMKPEDYEAKF 645
+ ISA ++ +AK
Sbjct: 645 KPISAQYIPDAFVQAKL 661
>gi|340522099|gb|EGR52332.1| predicted protein [Trichoderma reesei QM6a]
Length = 569
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/355 (34%), Positives = 171/355 (48%), Gaps = 74/355 (20%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF SVP+A+ L+GQ LLG PV+V+ +EAEKN N + + P +LY
Sbjct: 228 YVEFKSEDSVPLALQLTGQKLLGIPVIVQHTEAEKNRQARNPDS--SNAHPNSVPFHRLY 285
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VGN+HFN+TE L+ +FEPFG +E VQL D + G+ +G+GFVQF A+ A +NG
Sbjct: 286 VGNIHFNVTEQDLQAVFEPFGELEFVQLQKD-DNGRSRGYGFVQFRDAGQAREALEKMNG 344
Query: 442 KLEIVGRTLKVS---------------------------------------SVTDHVGTQ 462
++ GR ++V S D G +
Sbjct: 345 -FDLAGRPIRVGLGNDKFTPESTANLMHKFSGNNQGFQGSAFSGAGGRGQQSTFDRAGGR 403
Query: 463 D---TAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQ 519
D T SA DD D G+ N SR LM+KL RT A + NG+ Q
Sbjct: 404 DSEKTGGASA-LDDTDVAGVNFNNYSRDALMRKLARTDEAPT-----------NGNDERQ 451
Query: 520 QAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQG 579
Q + +P PV NMA S C++L NMFDPA E D+ E++
Sbjct: 452 QILKPKTETKP--------LPVNVNMA-------SRCVVLHNMFDPAEEEGDDWVKELED 496
Query: 580 DVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
+V +E KYG V HI VD S G +YL+F+ + +A + ++ R+F R+I A
Sbjct: 497 EVRQEAEEKYGHVVHISVDPNSKGDIYLKFDKVQGGENAIKGLNGRYFGGRMIDA 551
>gi|346972403|gb|EGY15855.1| RNA-binding protein rsd1 [Verticillium dahliae VdLs.17]
Length = 570
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 139/473 (29%), Positives = 209/473 (44%), Gaps = 135/473 (28%)
Query: 206 KKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG 265
K+E P + ERD+RTVF Q+ + R++ EFF K G V + +++ DR S+RSKGVG
Sbjct: 170 KREGTPPLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRISQRSKGVG 229
Query: 266 NAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEF 325
++F V L G +
Sbjct: 230 ---------------------YVEFKSEDTVTQALQLTGQK------------------- 249
Query: 326 YDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATG--PYGAIDRKLYVG 383
++ +P+ + L +EAEKN T A GT + P+ +LYVG
Sbjct: 250 --LLGIPIIVQL--------------TEAEKNRQVRTTEAAGTQSNSIPF----HRLYVG 289
Query: 384 NLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKL 443
N+HFN+TE L+ +FEPFG +E VQL D +TG+ +G+GFVQ+ A+ A +NG
Sbjct: 290 NIHFNVTEQDLQAVFEPFGELEFVQLQKD-DTGRSRGYGFVQYRDAGQAREALEKMNG-F 347
Query: 444 EIVGRTLKV----------------------------------------SSVTDHVGTQD 463
++ GR ++V +S D G +D
Sbjct: 348 DLAGRPIRVGLGNDKFTPESTANLLQRFSGREQPFQGSAFSGAGGRGPQNSTFDRAGGRD 407
Query: 464 T--AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQA 521
+ + ++ DD D G+ N SR LM+KL RT A+ +AV+++
Sbjct: 408 SEKSGGASALDDTDVAGVNFNNYSRDALMRKLARTDDAS--------------NAVDERQ 453
Query: 522 ISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDV 581
P +PV NMA S C++L NMFDP E D+ E++ DV
Sbjct: 454 TLKPKTETKPLPVNV-------NMA-------SRCVVLHNMFDPEEEEGEDWAKELEDDV 499
Query: 582 EEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
+E SKYGRV HI VD S G +YL+F+ + +A + ++ R+F R+I A
Sbjct: 500 RQEAESKYGRVVHISVDPNSKGDIYLKFDKVQGGENAIKGLNGRYFGGRMIDA 552
>gi|195155759|ref|XP_002018768.1| GL25979 [Drosophila persimilis]
gi|194114921|gb|EDW36964.1| GL25979 [Drosophila persimilis]
Length = 289
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 102/268 (38%), Positives = 145/268 (54%), Gaps = 29/268 (10%)
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHF++TE LR +FEPFG ++ +QL +D ET + KG+GF+ + E AK A
Sbjct: 30 RLYVGSLHFDITEEMLRGIFEPFGKIDAIQLIMDTETNRSKGYGFITYHNAEDAKKALEQ 89
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGI 498
LNG E+ GR +KV +VT+ + D S D D+ D G+ L A R LM KL
Sbjct: 90 LNG-FELAGRPMKVGNVTERL---DMNTTSLDTDEMDRTGIDLGATGRLQLMFKL----- 140
Query: 499 ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLL 558
A G+A + P Q P++ ++C +
Sbjct: 141 ----AEGAGLAVPQAAANALLATAPQPAPVQQQQATPSIA---------------TQCFI 181
Query: 559 LKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASA 617
L NMFDP ET+P +D+EI+ DV EEC+K+G V HI+VD S G VY++ ST A A
Sbjct: 182 LSNMFDPRTETNPTWDVEIRDDVLEECAKHGGVLHIHVDTASPTGTVYVKCPSTTTAVLA 241
Query: 618 QRAMHMRWFARRLISAIFMKPEDYEAKF 645
A+H RWFA R+I+A ++ +Y + F
Sbjct: 242 VNALHGRWFAGRVITAAYVPVVNYHSMF 269
>gi|281205731|gb|EFA79920.1| putative RNA splicing factor [Polysphondylium pallidum PN500]
Length = 606
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 158/545 (28%), Positives = 231/545 (42%), Gaps = 162/545 (29%)
Query: 160 SRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEK---KEVVEPEADP 216
+RS ER+R S + E+E R E+ + SRR EK E V PE P
Sbjct: 159 NRSSYERDRRSSSGK---------YEKESRYPEKPYDKPISRRSPEKPAAAEPVLPEISP 209
Query: 217 E----RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRD 272
E D RTVF ++ K TE D+YE
Sbjct: 210 EEQEESDSRTVFVSKLSPKITENDLYE--------------------------------- 236
Query: 273 DGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATV-LVSYRYIEFYDVMSV 331
FF A+ G V + V+D T L Y+EF + V
Sbjct: 237 -----------------FF--AQAGKVL-----KVSLVIDKITKRLKGVGYVEFSEREMV 272
Query: 332 PMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTE 391
A+ L+GQ +L Q ++V +EK A P + +LYVG L+ ++TE
Sbjct: 273 EKAVLLTGQKVLNQSILVHGIHSEKK-------ATPVTKIPVHTNNSRLYVGYLNLSITE 325
Query: 392 TQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLK 451
Q+R +F G +E V+ L ++ G K + FVQF E A+ A ALNG +E++G+ LK
Sbjct: 326 DQIRTIFSQHGDLEFVK--LHVKPGLYK-YAFVQFKASESAQKALDALNG-VEVMGKNLK 381
Query: 452 VSSVTDHVGTQDTAAKS------------------------------------------- 468
V V ++ GT ++S
Sbjct: 382 VVFVNEN-GTNKDLSQSNMNNPNNIHNNNNHHHQRNMHFQQNNQNNLNNQNNQNNIARVM 440
Query: 469 --------ADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQ 520
D++D G + L Q++++L KL IA++ A ++ A + + NQ
Sbjct: 441 QQVYHQPMGSLDEED-GSIPLTPQAQSILSAKLMGIPIASNGAHNVAAANVLANTVYNQ- 498
Query: 521 AISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGD 580
+P P P VT S C++LKNMFDP ET D+D EI+ D
Sbjct: 499 ---IP-------PAPPVTI-------------TSTCIVLKNMFDPDTETGDDWDKEIERD 535
Query: 581 VEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPED 640
VE ECS YG VKHI++DK S G++YL ++S E A++A ++ RWFA +++SA +
Sbjct: 536 VELECSTYGNVKHIFLDKNSQGYIYLCYDSIEGASTAINKLNRRWFAGKMLSAESIPENI 595
Query: 641 YEAKF 645
Y AKF
Sbjct: 596 YFAKF 600
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 61/152 (40%), Gaps = 60/152 (39%)
Query: 121 ERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELER 180
ER+RR SS + E+E
Sbjct: 164 ERDRR---------------------------------SSSGKYEKES------------ 178
Query: 181 ERERERELRERERDLEMRESRRYKEK---KEVVEPEADP----ERDQRTVFAYQMPLKAT 233
R E+ + SRR EK E V PE P E D RTVF ++ K T
Sbjct: 179 --------RYPEKPYDKPISRRSPEKPAAAEPVLPEISPEEQEESDSRTVFVSKLSPKIT 230
Query: 234 ERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG 265
E D+YEFF++AGKV V L++D+ ++R KGVG
Sbjct: 231 ENDLYEFFAQAGKVLKVSLVIDKITKRLKGVG 262
>gi|71003261|ref|XP_756311.1| hypothetical protein UM00164.1 [Ustilago maydis 521]
gi|46096316|gb|EAK81549.1| hypothetical protein UM00164.1 [Ustilago maydis 521]
Length = 640
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 141/451 (31%), Positives = 210/451 (46%), Gaps = 79/451 (17%)
Query: 212 PEADPERDQRTVFAYQMPLKATERDVYEFFSKA---GKVRDVRLIMDRNSRRSKGVGNAI 268
PE D + ++R+VF Q+ + +RD+ EFF G V+DVR++MDR + RSKGVG
Sbjct: 239 PEID-DYEERSVFCSQLSARLGQRDLGEFFEDHLGEGAVQDVRIVMDRVTHRSKGVG--- 294
Query: 269 MMRDDGNTLHSCLINSCCVIKFFLVAEV---------GMVFFLLGD-ETYTVLDPATVLV 318
+ L I I F + V G GD + + P +
Sbjct: 295 YVEFAARELVPKAIELTGKIVFGIPIVVQRTDAARSNGGAPRGPGDVSNHPGMAPHPAVA 354
Query: 319 SYRY-IEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID 377
+ + +PM ++G + + + P NT A
Sbjct: 355 ATQLDARVLANAPLPMQYHMAGAPIHLEAALRPPRALRPGPNMPNTEA------------ 402
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 437
+LYVG+LHF++T+ ++ +FEPFG +E V L + ETG+ KGF F+QF + E AK A
Sbjct: 403 -RLYVGSLHFSLTDEAVKTVFEPFGEIEYVDLHREPETGKSKGFCFIQFKKAEDAKKALE 461
Query: 438 ALNGKLEIVGRTLKVSSVT---DHVGTQDTAAKSADFDD-----------DDGGGLALNA 483
+NG + R ++V +V G+ T + DF DDGGG LN
Sbjct: 462 QMNG-FVLADRAIRVGNVNAKGSGGGSSHTNGSAQDFQGGGHLPQLTSSFDDGGGAGLNP 520
Query: 484 QSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIP 543
+ RA LM+KL R + PA + + Q +PA IP
Sbjct: 521 ERRAALMEKLARHNEPS---------PAASEATTTVQE-------RPA---------GIP 555
Query: 544 NMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAG 602
S S LLLKNMFDPA ET+P++D ++ DV+EEC +KYG V I+V+K SAG
Sbjct: 556 E-------STSTSLLLKNMFDPAEETEPNWDTDLAEDVKEECQAKYGPVTSIHVEKDSAG 608
Query: 603 FVYLRFESTEAAASAQRAMHMRWFARRLISA 633
+Y+ F + +A+ A ++ R+F + ISA
Sbjct: 609 EIYVTFANLDASRKALDGLNGRFFGGKPISA 639
>gi|242773880|ref|XP_002478329.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
gi|218721948|gb|EED21366.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
Length = 562
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 122/365 (33%), Positives = 172/365 (47%), Gaps = 87/365 (23%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN--TSAGGTATGPYGAIDRK 379
Y+EF D SVP+AI L+GQ LLG P++ + +EAEKN N S+G +A+ P+ +
Sbjct: 214 YVEFKDEASVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEASSGQSASAPF----HR 269
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVGN+HF++TE ++ +FEPFG +E VQL D ETG+ +G+GFVQF A+ A +
Sbjct: 270 LYVGNIHFSITENDIQNVFEPFGELEFVQLQKD-ETGRSRGYGFVQFRDPNQAREALEKM 328
Query: 440 NGKLEIVGRTLKVS---------------------------------------------- 453
NG ++ GR ++V
Sbjct: 329 NG-FDLAGRPIRVGLGNDKFTPESTANLLQRFQGQGHHQQYQGSAFSGNGGRGAQAGGAP 387
Query: 454 SVTDHVGTQDT---AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAP 510
S D G +DT ++ DD D G+ N SR LM+KL RT
Sbjct: 388 SNFDRAGGRDTDKGTGGASALDDTDVAGVNFNNYSRDALMRKLART-------------- 433
Query: 511 AVNGSAVNQQAISLPVVGQPAVP-VPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMET 569
++ S QP P PV NMA S C+LL+NMFDP E
Sbjct: 434 -------DEPEPSADEKLQPLRPKTEPKPLPVNVNMA-------SRCVLLRNMFDPTEEE 479
Query: 570 DPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFAR 628
+ E++ DV EC KYG V HI +D S G +YL+F+ + +A + ++ R+F
Sbjct: 480 GESWIKELEDDVRAECEEKYGHVVHISLDPNSQGDIYLKFDRVQGGENAIKGLNGRFFGG 539
Query: 629 RLISA 633
R ISA
Sbjct: 540 RQISA 544
>gi|310798506|gb|EFQ33399.1| CC1-like family splicing factor [Glomerella graminicola M1.001]
Length = 565
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 117/355 (32%), Positives = 174/355 (49%), Gaps = 75/355 (21%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF + SV A+ L+GQ LLG P++V+ +EAEKN T TA P +LY
Sbjct: 225 YVEFKNEDSVTQALQLTGQKLLGIPIIVQMTEAEKNRQVRTTET--TAAHPNSIPFHRLY 282
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VGN+HFN+TE L+ +FEPFG +E VQL D + G+ +G+GFVQ+ + A+ A +NG
Sbjct: 283 VGNIHFNVTEQDLQAVFEPFGELEFVQLQKD-DNGRSRGYGFVQYREASQAREALEKMNG 341
Query: 442 KLEIVGRTLKV----------------------------------------SSVTDHVGT 461
++ GR ++V +S D G
Sbjct: 342 -FDLAGRPIRVGLGNDKFTPESTANILQRFPGQNPQYQGSAFSGAGGRGPQTSAFDRAGG 400
Query: 462 QDT--AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQ 519
+D+ + ++ DD D G+ N SR LM+KL RT A+ + V++
Sbjct: 401 RDSEKSGGASALDDTDVAGVNFNNYSRDALMRKLARTDDAS--------------NGVDE 446
Query: 520 QAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQG 579
+ + P +PV NMA S C++L NMFDP E D+ E++
Sbjct: 447 RQLLKPKTETKPLPVNV-------NMA-------SRCVVLHNMFDPEEEEGDDWVKELED 492
Query: 580 DVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
DV +E +KYGRV HI VD S G +YL+F+ + +A R ++ R+F R+I A
Sbjct: 493 DVRQEAETKYGRVVHISVDPNSKGDIYLKFDKVQGGENAIRGLNGRYFGGRMIDA 547
>gi|303279518|ref|XP_003059052.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460212|gb|EEH57507.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 515
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/345 (35%), Positives = 169/345 (48%), Gaps = 38/345 (11%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAG-------GTATGPYG 374
Y+EF D S+ A++L+GQ L Q VMVK SEAEKN+ A T P
Sbjct: 186 YVEFKDKASIENALSLTGQTLRNQVVMVKSSEAEKNIAWEAEQATKREEQKLATTVDP-- 243
Query: 375 AIDR---------KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQ 425
AI+ KL V +H N+ E L+ +FEPFG + + + D G VQ
Sbjct: 244 AINPNLNPTAGPCKLRVEGVHPNVREEDLKAVFEPFGETDFITIDKDQSGG-----AHVQ 298
Query: 426 FAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAA-----KSADFDDDDGGGLA 480
+ + A A S LNG LE+VG+TLKV V AA +A +D G+
Sbjct: 299 YKLTQQAMLAVSQLNG-LELVGKTLKVFVAPVVVNPATAAAIAYTQANAVSLSEDAEGVR 357
Query: 481 LNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAP 540
++++ RA LM +L TS G A Q+A L PA +P
Sbjct: 358 MDSRGRAALMARL----AGTSDGGDFAGVDASGRVITAQEAAKLATPQMPAAALPTAQGV 413
Query: 541 VIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS 600
+ P P++ LLLKN+FDP ET+P++ +I DV++EC K+G V H +VDK S
Sbjct: 414 LGPGSPI-----PTQTLLLKNLFDPKEETEPEWWNDIAEDVKDECGKHGAVAHCHVDKDS 468
Query: 601 AGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
GFVYL+F + A AQ A+H RWFA R+I+A + Y F
Sbjct: 469 EGFVYLKFAEVKGAERAQAALHSRWFAGRMIAAEYQFTAVYNKHF 513
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 43/101 (42%)
Query: 165 ERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVF 224
+++RE E+ +RD RTVF
Sbjct: 128 QQKRELEKL-------------------------------------------DRDTRTVF 144
Query: 225 AYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG 265
AY + KA ER++Y+FFS AG V DVR+I DRN+ RSKG+
Sbjct: 145 AYNLSTKADEREIYKFFSAAGIVSDVRIIYDRNTPRSKGMA 185
>gi|296411655|ref|XP_002835545.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629331|emb|CAZ79702.1| unnamed protein product [Tuber melanosporum]
Length = 533
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/353 (33%), Positives = 174/353 (49%), Gaps = 63/353 (17%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATG--PYGAIDRK 379
Y+EF D SVP AI L+GQ LLG P++ + +EAEKN ++A T T P+ +
Sbjct: 183 YVEFKDEASVPKAIQLTGQKLLGIPIIAQLTEAEKNRQARVSAAEATTTNQIPF----HR 238
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVGN+HF++TE+ L+ +FEPFG +E VQL + E G+ +G+GFVQ+ A+ A +
Sbjct: 239 LYVGNIHFSITESDLQNVFEPFGELEFVQLQKE-EGGRSRGYGFVQYRDPNQAREALEKM 297
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTA---------------------------------- 465
NG ++ GR ++V D + TA
Sbjct: 298 NG-FDLAGRPIRVGLGNDKFTPESTAQMLQRFSGYQGFQGSAFDSRGRGGNDRVGRADDK 356
Query: 466 ---AKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAI 522
A ++ DD D G+ N SR LLM+KL R A NG
Sbjct: 357 ASGAGASALDDTDVAGVNFNNYSRDLLMRKLARQDEPAPTDKKTKSPAASNGK------- 409
Query: 523 SLPVVGQPAVPVPAV-TAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDV 581
LP+ + +P T P+ MA S C++LKNMFDPA ET + +++ DV
Sbjct: 410 DLPL--RQKLPEKVTKTLPLDVPMA-------SRCVVLKNMFDPAEETGDAWIKDLEDDV 460
Query: 582 EEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
+ EC +KYG V HI +D S G +Y++FE + A + ++ R+F R ISA
Sbjct: 461 KTECENKYGHVVHIALDPNSQGEIYIKFEKVQGGEKAIQGLNGRFFGGRRISA 513
>gi|115397599|ref|XP_001214391.1| hypothetical protein ATEG_05213 [Aspergillus terreus NIH2624]
gi|114192582|gb|EAU34282.1| hypothetical protein ATEG_05213 [Aspergillus terreus NIH2624]
Length = 568
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/360 (33%), Positives = 170/360 (47%), Gaps = 80/360 (22%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN--TSAGGTATGPYGAIDRK 379
Y+EF + SV AI L+GQ LLG P++ + +EAEKN N S+G P+ +
Sbjct: 223 YVEFKNEESVAPAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEASSGSNHAAPF----HR 278
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVGN+HF++TE+ L+ +FEPFG +E VQL D ETG+ +G+GFVQF A+ A +
Sbjct: 279 LYVGNIHFSITESDLQNVFEPFGELEFVQLQKD-ETGRSRGYGFVQFRDPNQAREALEKM 337
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTA---------------------------------- 465
NG ++ GR ++V D + A
Sbjct: 338 NG-FDLAGRAIRVGLGNDKFTPESNAQRMQSQGASQQNFQGSMFSGQGGRGVQAGGTNNF 396
Query: 466 -----------AKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNG 514
A ++ DD D G+ N SR LM+KL RT +
Sbjct: 397 DRAGGRESEKGAGASALDDTDVAGVNFNNYSRDALMRKLARTDEPSEP------------ 444
Query: 515 SAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFD 574
SA ++Q I P +PV NMA S C+LL+NMFDPA E +
Sbjct: 445 SADDKQKILRPKTETKPLPVNV-------NMA-------SRCVLLRNMFDPAEEEGESWI 490
Query: 575 LEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
E++ DV EC KYG V HI +D S G +YL+F+ + +A + ++ R+F R I+A
Sbjct: 491 KELEDDVRAECEDKYGHVVHIALDPNSQGDIYLKFDRVQGGENAIKGLNGRFFGGRQITA 550
>gi|380478594|emb|CCF43506.1| CC1-like family splicing factor [Colletotrichum higginsianum]
Length = 565
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 174/355 (49%), Gaps = 75/355 (21%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF + SV A+ L+GQ LLG P++V+ +EAEKN T T+ P +LY
Sbjct: 225 YVEFKNEDSVTQALQLTGQKLLGIPIIVQMTEAEKNRQVRTTET--TSAHPNSIPFHRLY 282
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VGN+HFN+TE L+ +FEPFG +E VQL D + G+ +G+GFVQ+ + A+ A +NG
Sbjct: 283 VGNIHFNVTEQDLQAVFEPFGELEFVQLQKD-DNGRSRGYGFVQYREASQAREALEKMNG 341
Query: 442 KLEIVGRTLKV----------------------------------------SSVTDHVGT 461
++ GR ++V +S D G
Sbjct: 342 -FDLAGRPIRVGLGNDKFTPESTANILQRFPGQNPQFQGSAFSGAGGRGPQTSAFDRAGG 400
Query: 462 QDT--AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQ 519
+D+ + ++ DD D G+ N SR LM+KL RT A+ + V++
Sbjct: 401 RDSEKSGGASALDDTDVAGVNFNNYSRDALMRKLARTDDAS--------------NGVDE 446
Query: 520 QAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQG 579
+ + P +PV NMA S C++L NMFDP E ++ E++
Sbjct: 447 RQVLKPKTETKPLPVNV-------NMA-------SRCVVLHNMFDPEEEEGDEWVKELED 492
Query: 580 DVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
DV +E +KYGRV HI VD S G +YL+F+ + +A R ++ R+F R+I A
Sbjct: 493 DVRQEAETKYGRVVHISVDPNSKGDIYLKFDKVQGGENAIRGLNGRYFGGRMIDA 547
>gi|119186105|ref|XP_001243659.1| hypothetical protein CIMG_03100 [Coccidioides immitis RS]
gi|392870366|gb|EAS32162.2| CC1-like family splicing factor [Coccidioides immitis RS]
Length = 595
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/356 (33%), Positives = 175/356 (49%), Gaps = 73/356 (20%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID-RKL 380
Y+EF + SVP+AI L+GQ LLG P++ + +EAEKN NT G +G +I +L
Sbjct: 251 YVEFKNEESVPLAIQLTGQKLLGIPIIAQFTEAEKNKAARNTE--GHVSGNQNSIPFHRL 308
Query: 381 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 440
YVGN+HF++TE+ L+ +FEPFG ++ VQL D E G+ +G+GFVQF A+ A +N
Sbjct: 309 YVGNIHFSITESDLQNVFEPFGELDFVQLQKD-ENGRSRGYGFVQFRDPNQAREALEKMN 367
Query: 441 GKLEIVGRTLKVSSVTDHV--------------GTQDT---------------------- 464
G ++ GR ++V D G Q++
Sbjct: 368 G-FDLAGRPIRVGLGNDKFSSDPATNLMRLQAQGQQNSLYGQGGRGAATALGGNFDRAGG 426
Query: 465 ------AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVN 518
++ DD D G+ N SR LM+KL RT PA + +A +
Sbjct: 427 RDNDKGVGGASALDDTDVAGVNFNNYSRDALMRKLARTD-----------EPAADTTADD 475
Query: 519 QQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQ 578
++ P A P+ PV NMA S C+LL+NMFDP E + E++
Sbjct: 476 KR--KAPKARPEAKPL-----PVSVNMA-------SRCVLLRNMFDPTEEEGDSWVKELE 521
Query: 579 GDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
DV EC KYG V HI +D + G +YL+F+ + +A + ++ R+F R I+A
Sbjct: 522 DDVRAECEEKYGHVVHIALDPNAQGDIYLKFDRVQGGENAIKGLNGRFFGGRQITA 577
>gi|308807104|ref|XP_003080863.1| RNA recognition motif (ISS) [Ostreococcus tauri]
gi|116059324|emb|CAL55031.1| RNA recognition motif (ISS) [Ostreococcus tauri]
Length = 387
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/338 (35%), Positives = 168/338 (49%), Gaps = 22/338 (6%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA----------GGTATG 371
Y+EF D + A+ +G L G + VK SEAEKN+ A
Sbjct: 54 YVEFSDRKFIHPALECTGMELHGNAISVKTSEAEKNIAWEAEQAQKKKLGAAYGAAVYGA 113
Query: 372 PYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEH 431
GA KL VG LH ++E ++ +FEPFG ++ + + L + G+ FVQF Q
Sbjct: 114 GGGAGPCKLRVGGLHLALSEDDIKAVFEPFGQLDFISM-LKEDDGKYAS-AFVQFRQTSQ 171
Query: 432 AKAAQSALNGKLEIVGRTLKVS----SVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRA 487
A A S LNG LE+VG ++VS T T +S D+DGGGL ++++ RA
Sbjct: 172 AMLALSQLNG-LELVGIPIRVSIASQGATAAASTMVAPTESLGELDEDGGGLKMDSRGRA 230
Query: 488 LLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAA 547
LM +L G I + PA G AI + P +P P+ +
Sbjct: 231 ALMARL--AGQDKEIEKGFTIDPA-TGLPTTVDAIK--PIDAPGEDLPLAAQPITQGVLG 285
Query: 548 EFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLR 607
P+ CLLLKN+F+ A ETDP++ L+I DV+ EC K+G + H +VDK S GFVYL+
Sbjct: 286 PGSPIPTPCLLLKNLFNAAEETDPEWWLDIAEDVKGECEKFGEITHTFVDKDSQGFVYLK 345
Query: 608 FESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
F ++ AQ+A+H RWFA R I+A + Y F
Sbjct: 346 FADVASSTRAQQALHTRWFAGRKIAAEYQFAATYNGHF 383
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGV 264
+RD RTVF + K ER +++FFSK GKV DVR+I DRNS SKG+
Sbjct: 5 DRDTRTVFVTNLSTKLDERGIFKFFSKVGKVTDVRIIYDRNSTTSKGM 52
>gi|453087053|gb|EMF15094.1| splicing factor, CC1-like protein [Mycosphaerella populorum SO2202]
Length = 622
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/345 (33%), Positives = 174/345 (50%), Gaps = 30/345 (8%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF D SV AI L+GQ LLG P++ + +EAEKN T GTAT G +LY
Sbjct: 281 YVEFKDEESVQKAIGLTGQKLLGIPIIAQLTEAEKNRQARTTE--GTATQSNGVPFHRLY 338
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VGN+HF++TE L+ +FEPFG +E QL + E G+ KG+GFVQF AK A +NG
Sbjct: 339 VGNIHFSITEADLKNVFEPFGELEFAQLQKE-ENGRSKGYGFVQFIDPAQAKEALEKMNG 397
Query: 442 KLEIVGRTLKVSSVTDHVGTQDT-------------AAKSADFDDDDGGGLALNAQS--- 485
E+ GR ++V D T+ T A K + F G G
Sbjct: 398 -FELAGRPIRVGLGNDKFTTESTQTLLVKFGSHTPSAQKGSQFSGLGGRGAHAGGTGNFD 456
Query: 486 RALLMQKLDRTGIATSIAGS-LGVAPAVNGS--AVNQQAISLPVVGQPAVPVPAVTAPVI 542
R + +D+TG A+++ + +G N S + +Q Q P V P
Sbjct: 457 RPAAARDVDKTGGASALDDTDVGGVDFHNYSREKLMKQLARTDEPEQKIAPKTQVKKPAT 516
Query: 543 PNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVD-KRS 600
S S C+L+KNM++ E++P + E++ DV+ EC KYG+V HI + +
Sbjct: 517 FEQP-----SASRCVLIKNMYNQNEESEPGWQKELKDDVKSECEEKYGKVVHIDLALDNN 571
Query: 601 AGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
G VY++F+ + +A + ++ RWFA R+I+A ++ Y F
Sbjct: 572 DGEVYVKFDRVQGGENAFKGLNGRWFAGRMITAQYVVDAVYTMNF 616
>gi|303318024|ref|XP_003069014.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240108695|gb|EER26869.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320036831|gb|EFW18769.1| RNA splicing factor [Coccidioides posadasii str. Silveira]
Length = 593
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/356 (33%), Positives = 175/356 (49%), Gaps = 73/356 (20%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID-RKL 380
Y+EF + SVP+AI L+GQ LLG P++ + +EAEKN NT G +G +I +L
Sbjct: 249 YVEFKNEESVPLAIQLTGQKLLGIPIIAQFTEAEKNKAARNTE--GHVSGNQNSIPFHRL 306
Query: 381 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 440
YVGN+HF++TE+ L+ +FEPFG ++ VQL D E G+ +G+GFVQF A+ A +N
Sbjct: 307 YVGNIHFSITESDLQNVFEPFGELDFVQLQKD-ENGRSRGYGFVQFRDPNQAREALEKMN 365
Query: 441 GKLEIVGRTLKVSSVTDHV--------------GTQDT---------------------- 464
G ++ GR ++V D G Q++
Sbjct: 366 G-FDLAGRPIRVGLGNDKFSSDPATNLMRLQAQGQQNSLYGQGGRGAATALGGNFDRAGG 424
Query: 465 ------AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVN 518
++ DD D G+ N SR LM+KL RT PA + +A +
Sbjct: 425 RDNDKGVGGASALDDTDVAGVNFNNYSRDALMRKLARTD-----------EPAADTTADD 473
Query: 519 QQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQ 578
++ P A P+ PV NMA S C+LL+NMFDP E + E++
Sbjct: 474 KR--KAPKARPEAKPL-----PVSVNMA-------SRCVLLRNMFDPTEEEGDSWVKELE 519
Query: 579 GDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
DV EC KYG V HI +D + G +YL+F+ + +A + ++ R+F R I+A
Sbjct: 520 DDVRAECEEKYGHVVHIALDPNAQGDIYLKFDRVQGGENAIKGLNGRFFGGRQITA 575
>gi|358386930|gb|EHK24525.1| hypothetical protein TRIVIDRAFT_71881 [Trichoderma virens Gv29-8]
Length = 571
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/357 (33%), Positives = 172/357 (48%), Gaps = 78/357 (21%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN--TSAGGTATGPYGAIDRK 379
Y+EF + SV +A+ L+GQ LLG PV+V+ +EAEKN N S G + P+ +
Sbjct: 230 YVEFKNEDSVQLALQLTGQKLLGIPVIVQHTEAEKNRQARNPDASNGHPNSIPF----HR 285
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVGN+HFN+TE L+ +FEPFG +E VQL D + G+ +G+GFVQF A+ A +
Sbjct: 286 LYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKD-DNGRSRGYGFVQFRDAGQAREALEKM 344
Query: 440 NGKLEIVGRTLKVS---------------------------------------SVTDHVG 460
NG ++ GR ++V S D G
Sbjct: 345 NG-FDLAGRPIRVGLGNDKFTPESTANLMHKFSGNNQGFQGSAFSGAGGRGQQSAFDRAG 403
Query: 461 TQD---TAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAV 517
+D T SA DD D G+ N SR LM+KL RT A + NG+
Sbjct: 404 GRDSEKTGGASA-LDDTDVAGVNFNNYSRDALMRKLARTDEAPT-----------NGNDE 451
Query: 518 NQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEI 577
QQ + +P PV NMA S C++L NMFDP E D+ E+
Sbjct: 452 RQQILKPKTETKP--------LPVNVNMA-------SRCVVLHNMFDPTEEEGDDWVKEL 496
Query: 578 QGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
+ +V +E +YG V HI VD S G +YL+F+ + +A + ++ R+F R+I A
Sbjct: 497 EDEVRQEAEERYGHVVHISVDPNSKGDIYLKFDKVQGGENAIKGLNGRYFGGRMIDA 553
>gi|378731264|gb|EHY57723.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 562
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 119/363 (32%), Positives = 170/363 (46%), Gaps = 83/363 (22%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID-RKL 380
Y+EF + SVP+AI ++GQ LLG P++ + +EAEKN N A +T + ++ +L
Sbjct: 214 YVEFKNEESVPLAIQMTGQKLLGIPIIAQLTEAEKNRQARNPEA---STSHHNSVPFHRL 270
Query: 381 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 440
YVGN+HF++TE L+ +FEPFG +E VQL D ETG+ +G+GFVQF A+ A +N
Sbjct: 271 YVGNIHFSITEQDLQNVFEPFGELEFVQLQKD-ETGRSRGYGFVQFRDPNQAREALEKMN 329
Query: 441 GKLEIVGRTLKVSSVTDHVGTQDT------------------------------------ 464
G ++ GR ++V D + T
Sbjct: 330 G-FDLAGRPIRVGLGNDKFTPESTANLLQRFQGQNHSGGSQGSAFSGLGGRGAHAGGSGG 388
Query: 465 -------------AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPA 511
A ++ DD D G+ N SR LM+KL RT PA
Sbjct: 389 AFDRAGGRDNDKGAGNASALDDTDVAGVNFNNYSRDALMRKLARTD-----------EPA 437
Query: 512 VNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDP 571
A ++A LP +PV A S C+LL+NMFDPA E
Sbjct: 438 --HEAETKRAAVLPKKESKPLPVNVSQA--------------SRCVLLRNMFDPAEEEGE 481
Query: 572 DFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRL 630
++ E++ DV EC KYG V HI VD + G +YL+FE +A + ++ R+F R
Sbjct: 482 NWVKELEDDVRAECEEKYGHVVHISVDPNTQGDIYLKFERVSGGENAIKGLNGRYFGGRQ 541
Query: 631 ISA 633
ISA
Sbjct: 542 ISA 544
>gi|358058197|dbj|GAA95989.1| hypothetical protein E5Q_02647 [Mixia osmundae IAM 14324]
Length = 959
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 117/330 (35%), Positives = 170/330 (51%), Gaps = 59/330 (17%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN----LVQSN---------TSAGGT 368
Y+EF ++ +V A+ALSG +LG P+ V+ +EAEKN QS+ T G+
Sbjct: 319 YVEFMELETVQRALALSGMKVLGVPIQVQYTEAEKNRQASTAQSSYGALMDAGFTIPAGS 378
Query: 369 ATGPYGAIDRK-LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFA 427
P GA+ LYVG+L++++T +R++F PFG V V L D +G+ KG+ +VQF
Sbjct: 379 DATPSGAVPYNVLYVGSLNYSLTADDMREVFTPFGAVASVDLQTDPGSGKSKGYCYVQFY 438
Query: 428 QLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG-GGLALNAQSR 486
+ A A+ +NG ++ GR L++S++++ ++S DG G LN R
Sbjct: 439 KHVDAIHAREKMNG-FQLAGRQLRISTISERNAILPPMSRSGPVALGDGEIGPNLNNIGR 497
Query: 487 ALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMA 546
LMQKL RT A+ NQ P P V P IP A
Sbjct: 498 IELMQKLARTDAAS-----------------NQ-------------PPPTVMRPNIPTAA 527
Query: 547 AEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSA-GFV 604
S C+LLKNMFDPA ET+P +D +++ DV+EE SKYG V + V + S G +
Sbjct: 528 -------SRCILLKNMFDPAEETEPTWDTDLRDDVKEEIQSKYGAVAELVVQRDSTEGAI 580
Query: 605 YLRFESTEAAASAQRAMHMRWFARRLISAI 634
YL+ E T AA A ++ RW LI+A+
Sbjct: 581 YLKMEDTNGAAKALSGLNGRW----LITAV 606
>gi|387193898|gb|AFJ68729.1| rna binding motif protein 39b, partial [Nannochloropsis gaditana
CCMP526]
Length = 456
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 146/456 (32%), Positives = 206/456 (45%), Gaps = 104/456 (22%)
Query: 202 RYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRS 261
R KE+KE+ E +DQRTVF Q+ +KA ER V FF GKVR V
Sbjct: 68 RTKEQKELDELT----KDQRTVFISQLVMKADERAVRAFFENFGKVRSV----------- 112
Query: 262 KGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYR 321
+M+RD H +
Sbjct: 113 ------VMLRDRSTGKHK---------------------------------------GFA 127
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQ--PVMVKPSEAEKN-LVQSNTSAGGTATGPYGAIDR 378
Y+E D+ ++P + ++ Q+ Q P+ VK SEAEKN L + A GT P G R
Sbjct: 128 YVEMADLETIPNVLLMNDQVPDFQKFPIAVKASEAEKNYLAKQEAIAKGTVR-PDGGRKR 186
Query: 379 ------KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHA 432
K+++GNLH N+TE L L +PFG V+ + L + E G KGF F F+++E A
Sbjct: 187 NVGQPNKVFLGNLHPNITEEDLMDLLKPFGEVQGLALAKN-EEGVSKGFAFATFSKVEEA 245
Query: 433 KAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSA---------DFDDDDGGGLALNA 483
+ + L G + + R +KV V D G + A S+ ++ DD G L ++A
Sbjct: 246 QTVMTQLGG-VPLADRPIKVGPVNDR-GVEAVAMASSVPASGPATGNWRLDDAGVLPMDA 303
Query: 484 QSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIP 543
+RA LM KL G A I + P G+ Q P P
Sbjct: 304 AARAELMSKL---GAAAGIQVPVSAGP---GAQQLQLQQLQQQQLLQQQPPP-------- 349
Query: 544 NMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVD-KRSAG 602
+G PS LLLKNMFDPA E D ++L+IQ DVE+E K+G V+H+ VD K G
Sbjct: 350 -----IVGIPSRALLLKNMFDPAEEKDDGWELDIQDDVEDEGRKFGEVRHVRVDVKGPGG 404
Query: 603 FVYLRFEST--EAAASAQRAMHMRWFARRLISAIFM 636
VY+ F+ E A + +A++ RWFA R+I ++
Sbjct: 405 HVYMLFKEGEEEGAQKSAQALNGRWFAGRMIMVEYL 440
>gi|307109776|gb|EFN58013.1| hypothetical protein CHLNCDRAFT_57088 [Chlorella variabilis]
Length = 546
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 138/396 (34%), Positives = 181/396 (45%), Gaps = 101/396 (25%)
Query: 319 SYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQ------------------ 360
+ YIEF V A+AL+GQ+L+GQ VMVK SEAEKNL
Sbjct: 181 GFAYIEFQRKEDVINALALTGQVLMGQAVMVKMSEAEKNLAWEAAEQAKRQQKELERELG 240
Query: 361 -----------------------SNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKL 397
+ A A GP +L + NL ++TET LR +
Sbjct: 241 PGAMAAPLLPPPMPPGMPGMVGLAMPMAPMVAAGP-----ARLALSNLPTSITETDLRPI 295
Query: 398 FEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTD 457
FEPFG ++ + L D + G GFVQ+ L A A+ L+G L+IVG L V
Sbjct: 296 FEPFGALDFLTLQRDT-AARPTGNGFVQYRLLSDATKAKENLSG-LDIVGHQLGVGWANV 353
Query: 458 HVGTQDTAA---------------KSADFDDDDG----GGLALNAQSRALLMQKLDRTGI 498
+ A + AD D+ GGL L QSRA LM KL
Sbjct: 354 ETPVEAVAIAPPPPPLPVAMAAAEQVADQLDEPAEGTGGGLKLTGQSRAALMSKL----- 408
Query: 499 ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTA--PVIPNMAA---EFIGS- 552
A N L V P +P+P V P++P+ A +G
Sbjct: 409 ------------AANAG--------LDVSNVPQIPLPQVAPQQPLVPSALALEQGLLGPA 448
Query: 553 ---PSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFE 609
P++CLLLKNMFDPA ET ++D EI DV EC KYG V+H++VD+ S GFVY++F
Sbjct: 449 SPIPTQCLLLKNMFDPAEETADNWDAEIAEDVGSECQKYGPVEHVFVDRNSRGFVYVKFT 508
Query: 610 STEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+ +AA+AQRA+H RWFA R I+A F Y F
Sbjct: 509 AISSAANAQRALHGRWFAARQIAADFQFTPIYNQHF 544
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 6/83 (7%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNT 276
+RD RTVFAY +PL+A E+++++FF KAG + D+++I D+ + RSKG R +
Sbjct: 135 DRDTRTVFAYNLPLRAEEKEIFQFFIKAGPLNDIKVITDKTTGRSKGFAYIEFQRKED-- 192
Query: 277 LHSCLINSCCVIKFFLVAEVGMV 299
+IN+ + L+ + MV
Sbjct: 193 ----VINALALTGQVLMGQAVMV 211
>gi|342884065|gb|EGU84408.1| hypothetical protein FOXB_05073 [Fusarium oxysporum Fo5176]
Length = 566
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 147/489 (30%), Positives = 209/489 (42%), Gaps = 138/489 (28%)
Query: 191 RERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDV 250
R RD E RE++R + ++ E E RD+RTVF Q+ + R++ EFF K G V +
Sbjct: 152 RGRDDERRETKREEGNPQLTEDE----RDRRTVFVQQLAARLRTRELKEFFEKVGPVNEA 207
Query: 251 RLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTV 310
+++ DR S+RSKGVG ++F V L G +
Sbjct: 208 QIVKDRISQRSKGVG---------------------YVEFKNEESVTQALQLTGQK---- 242
Query: 311 LDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTAT 370
++ +P+ + + +EAEKN N A G
Sbjct: 243 -----------------LLGIPVIVQV--------------TEAEKNRQARNPEASGPH- 270
Query: 371 GPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLE 430
P +LYVGN+HFN+TE L+ +FEPFG +E VQL D E G+ +G+GFVQF
Sbjct: 271 -PNSIPFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKD-ENGRSRGYGFVQFRDAG 328
Query: 431 HAKAAQSALNGKLEIVGRTLKV-------------------------------------- 452
A+ A +NG ++ GR ++V
Sbjct: 329 QAREALEKMNG-FDLAGRPIRVGLGNDKFTPESTANMLQRFSGQNQNQNFQGSAFSGSGG 387
Query: 453 ----SSVTDHVGTQD---TAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGS 505
SS D G +D T SA DD D G+ N SR LM+KL RT +
Sbjct: 388 RGPQSSTFDRAGGRDNEKTGGASA-LDDTDVAGVNFNNYSRDALMRKLARTDDS------ 440
Query: 506 LGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDP 565
A NG Q V +P + PV NMA S C++L NMFDP
Sbjct: 441 -----ATNGHDERQ-------VLKPKTETKPL--PVNVNMA-------SRCVVLHNMFDP 479
Query: 566 AMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMR 624
E D+ E++ DV +E SKYG V HI D S G +YL+F+ + +A + ++ R
Sbjct: 480 EEEEGTDWVKELEDDVRQEAESKYGHVVHISADPNSKGDIYLKFDKVQGGENAIKGLNGR 539
Query: 625 WFARRLISA 633
+F R+I A
Sbjct: 540 YFGGRMIDA 548
>gi|402084391|gb|EJT79409.1| RNA splicing factor Pad-1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 601
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 122/371 (32%), Positives = 181/371 (48%), Gaps = 77/371 (20%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGP--YGAIDRK 379
Y+EF S+P A+ L+GQ L G PV+V+P+EAEKN Q T+ A G + +
Sbjct: 255 YVEFKSEESLPAALQLTGQKLAGIPVIVQPTEAEKNR-QVRTTENSNANGAQQNSVLFHR 313
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVGN+HF++TE LR +F PFG + VQL + + G+ +G+GFV++ +A+ A +
Sbjct: 314 LYVGNIHFSITEPDLRTVFGPFGELRFVQLQKE-DNGRSRGYGFVEYNDPANAREALEKM 372
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTA---------------------------AKSADF- 471
NG ++ GR ++V D + TA +S++F
Sbjct: 373 NG-FDLAGRPIRVGLGNDKFTPESTANIMQRYPGTNGGNQGQGYPGRNGQANGPQSSNFD 431
Query: 472 -----DDDDGG-----------GLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGS 515
D+D GG G+ N+ SR LM+KL RT A+S AP
Sbjct: 432 RAGGRDNDKGGGASALDDTDVAGVNFNSYSRDALMRKLARTDEASS-------APP---- 480
Query: 516 AVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDL 575
+Q I P +PV NMA S C+LLKNMFDPA E+ D+
Sbjct: 481 --ERQQILKPKTEIKPLPVNV-------NMA-------SRCVLLKNMFDPAEESGEDWIK 524
Query: 576 EIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAI 634
+++ DV EE KYG V HI VD S G +YL+F+ + +A + ++ R+F +I+A
Sbjct: 525 DLENDVREEAEKKYGHVVHISVDPNSNGDIYLKFDKVQGGENAIKGLNGRYFGGNIITAA 584
Query: 635 FMKPEDYEAKF 645
+ Y + F
Sbjct: 585 PVVDAVYSSLF 595
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG 265
ERD+RTVF Q+ + ++++EFF +AG V +++ DR S RSKGVG
Sbjct: 206 ERDRRTVFVQQLAARLRTKELHEFFEQAGPVAAAQIVKDRVSNRSKGVG 254
>gi|345563952|gb|EGX46935.1| hypothetical protein AOL_s00097g361 [Arthrobotrys oligospora ATCC
24927]
Length = 546
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 179/359 (49%), Gaps = 62/359 (17%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN------LVQSNTSAGGTATGPYGA 375
Y+EF + SVP AIAL+GQ LLG P++V+ +EAEKN Q N T P+
Sbjct: 209 YVEFKEAESVPKAIALTGQRLLGIPIIVQLTEAEKNRQARAEGGQHNRDEDHRRTIPF-- 266
Query: 376 IDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAA 435
+LYVGN+HF++TE +L+++F PFG +E VQL + E+G+ +G+GFVQ+ +AK A
Sbjct: 267 --HRLYVGNIHFSITENELQQVFAPFGDLEFVQLQKE-ESGRSRGYGFVQYRDPNNAKEA 323
Query: 436 QSALNGKLEIVGRTLKVSSVTD----------------------------HVGTQDTAAK 467
+NG ++ GR ++V D + +T+
Sbjct: 324 LERMNG-FDLGGRLIRVGLGNDKFTPESTAQMLQRFSNGQQAYEGRQRHNQIQNINTSGA 382
Query: 468 SADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVV 527
++ DD D G+ N SR LM+KL R + + G NG ++ I+ P
Sbjct: 383 ASALDDADVAGVNFNNFSRDALMRKLAR--VEEPVHEQNG---ETNGEQKQRRQIAPP-- 435
Query: 528 GQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-S 586
P P PV N S C+++KNMFDP E + +++ DV+ EC +
Sbjct: 436 -----PKP----PVATNSTV-----ASRCVVVKNMFDPTQEEGDAWVKDLEDDVKAECEA 481
Query: 587 KYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
KYG V HI VD S G VY++FE +A + ++ R+F R ISA+ + Y + F
Sbjct: 482 KYGHVVHISVDPNSGGDVYIKFEKIVGGENAIKGLNGRFFGGRQISALPVVDAVYSSLF 540
>gi|327293227|ref|XP_003231310.1| RNA splicing factor [Trichophyton rubrum CBS 118892]
gi|326466426|gb|EGD91879.1| RNA splicing factor [Trichophyton rubrum CBS 118892]
Length = 592
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 171/362 (47%), Gaps = 81/362 (22%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA---GGTATGPYGAIDR 378
Y+EF + SVP+AI L+GQ LLG P++ + +EAEKN N A + P+
Sbjct: 244 YVEFKNEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPDAHSNNNQQSIPF----H 299
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVGN+HF++TE+ L+ +FEPFG ++ VQL + ETG+ KG+GFVQF A+ A
Sbjct: 300 RLYVGNIHFSITESDLQNVFEPFGELDFVQLQRE-ETGRSKGYGFVQFRDPNQAREALEK 358
Query: 439 LNGKLEIVGRTLKV--------------------------SSVTDHVG------------ 460
+NG ++ GR ++V SS + H G
Sbjct: 359 MNG-FDLAGRPIRVGLGNDKFSHDPAQLMQRLQQQGHNQGSSYSHHGGRGANVGGSSGGN 417
Query: 461 --------TQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAV 512
A ++ DD D G+ N SR LM+KL RT PA
Sbjct: 418 FDRAGGRDNDKGAGGASALDDTDVAGVNFNNYSRDALMRKLARTD-----------EPAA 466
Query: 513 NGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPD 572
+ ++ P A PV NMA S C+LL+NMFDPA E
Sbjct: 467 EPAPDEKRKA-------PKARTEAKPLPVTVNMA-------SRCVLLRNMFDPAQEEGES 512
Query: 573 FDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLI 631
+ E++ DV EC KYG V HI +D + G +YL+F+ + +A + ++ R+F R I
Sbjct: 513 WVKELEDDVRAECEEKYGHVVHISLDPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQI 572
Query: 632 SA 633
SA
Sbjct: 573 SA 574
>gi|145231104|ref|XP_001389816.1| RNA-binding protein rsd1 [Aspergillus niger CBS 513.88]
gi|134055944|emb|CAK37421.1| unnamed protein product [Aspergillus niger]
gi|350638781|gb|EHA27137.1| hypothetical protein ASPNIDRAFT_46267 [Aspergillus niger ATCC 1015]
Length = 570
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 121/360 (33%), Positives = 174/360 (48%), Gaps = 80/360 (22%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN--TSAGGTATGPYGAIDRK 379
Y+EF SV AI L+GQ LLG P++ + +EAEKN N S+G P+ +
Sbjct: 225 YVEFKSEDSVAPAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEASSGNNHAAPF----HR 280
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVGN+HF++TE+ L+ +FEPFG +E VQL D ETG+ +G+GFVQF A+ A +
Sbjct: 281 LYVGNIHFSITESDLQNVFEPFGELEFVQLQKD-ETGRSRGYGFVQFRDPNQAREALEKM 339
Query: 440 NGKLEIVGRTLKV-------------------------------------------SSVT 456
NG ++ GR ++V +S
Sbjct: 340 NG-FDLAGRAIRVGLGNDKFTPDSNAQRMQSQGANQHNFQGSLFSGHGGRGVQAGGTSNF 398
Query: 457 DHVGTQDT--AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNG 514
D G +D+ A ++ DD D G+ N SR LM+KL RT + A
Sbjct: 399 DRAGGRDSEKGAGASALDDTDVAGVNFNNYSRDALMRKLARTDEPSEPA----------- 447
Query: 515 SAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFD 574
A +QQ + P A P+ PV NMA S C++L+NMFDP E +
Sbjct: 448 -ADDQQKVLRPKT--EAKPL-----PVNVNMA-------SRCVMLRNMFDPNEEEGEAWI 492
Query: 575 LEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
E++ DV EC KYG V HI +D S G +YL+F+ + +A + ++ R+F R I+A
Sbjct: 493 KELEDDVRAECEDKYGHVVHIALDPNSQGDIYLKFDRVQGGENAIKGLNGRFFGGRQITA 552
>gi|406866575|gb|EKD19615.1| RNA splicing factor [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 587
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 140/489 (28%), Positives = 209/489 (42%), Gaps = 133/489 (27%)
Query: 206 KKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG 265
K+E P + ERD+RTVF Q+ + +++ FF K G V++ +++ DR S RSKGVG
Sbjct: 177 KRETTPPLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVG 236
Query: 266 NAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEF 325
++F V L G +
Sbjct: 237 ---------------------YVEFKNEESVPAAIQLTGQK------------------- 256
Query: 326 YDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNL 385
++ +P+ L +EAEKN N A T++ P +LYVGN+
Sbjct: 257 --LLGIPIIAQL--------------TEAEKNRQVRNPEA--TSSNPNQIPFHRLYVGNI 298
Query: 386 HFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEI 445
HF++TE+ L+ +FEPFG +E VQL + E G+ +G+GFVQF A+ A +NG ++
Sbjct: 299 HFSITESDLQNVFEPFGELEFVQLQKE-EQGRSRGYGFVQFRDPSQAREALEKMNG-FDL 356
Query: 446 VGRTLKVSSVTDHVGTQDT------------------------------AAKSADF---- 471
GR ++V D + T AA +F
Sbjct: 357 AGRPIRVGLGNDKFTPESTASLLQRFQGQSHQQQFQGSAFSGAGGRGPQAANGGNFDRAG 416
Query: 472 --------------DDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAV 517
DD D GG+ N SR LM+KL RT APA G
Sbjct: 417 GRDNEKSSGGASALDDTDVGGVNFNNYSRDALMRKLARTDEP---------APATKGRDE 467
Query: 518 NQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEI 577
++ + +P A+ PV NMA S C++LKNMFDPA E ++ E+
Sbjct: 468 RREVV------KPKTEAKAL--PVNVNMA-------SRCVVLKNMFDPAEEEGDSWEKEL 512
Query: 578 QGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFM 636
+ DV E KYG V HI +D S G +YL+F+ + +A + ++ R+F R+ISA +
Sbjct: 513 EDDVRAEAEEKYGHVVHISLDPNSQGDIYLKFDRVQGGENAIKGLNGRYFGGRMISATPV 572
Query: 637 KPEDYEAKF 645
Y + F
Sbjct: 573 VDAVYSSLF 581
>gi|258578315|ref|XP_002543339.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
gi|237903605|gb|EEP78006.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
Length = 582
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 118/354 (33%), Positives = 172/354 (48%), Gaps = 71/354 (20%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID-RKL 380
Y+EF + SVP+AI L+GQ LLG P++ + +EAEKN N A G +G +I +L
Sbjct: 240 YVEFKNEESVPVAIQLTGQKLLGIPIIAQFTEAEKNKAARN--AEGHVSGNQNSIPFHRL 297
Query: 381 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 440
YVGN+HF++TE+ L+ +FEPFG ++ VQL D E G+ +G+GFVQF A+ A +N
Sbjct: 298 YVGNIHFSITESDLQNVFEPFGELDFVQLQKD-ENGRSRGYGFVQFRDPNQAREALEKMN 356
Query: 441 GKLEIVGRTLKVSSVTDHV--------------------------GTQDTA--------- 465
G ++ GR ++V D GTQ +
Sbjct: 357 G-FDLAGRPIRVGLGNDKFSSDSATNLMRLQSQGQQGSLYGQGGRGTQAASNFDRAGGRD 415
Query: 466 -----AKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQ 520
++ DD D G+ N SR LM+KL RT PA + S +++
Sbjct: 416 NDKGIGGASALDDTDVAGVNFNNYSRDALMRKLARTD-----------EPAADTSTDDKR 464
Query: 521 AISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGD 580
P A PV NMA S C+LL+NMFDP E + E++ D
Sbjct: 465 KA-------PKARTEAKPLPVSVNMA-------SRCVLLRNMFDPTEEEGDSWVKELEDD 510
Query: 581 VEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
V EC KYG V HI +D + G +YL+F+ + +A + ++ R+F R I+A
Sbjct: 511 VRAECEEKYGHVVHIALDPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQITA 564
>gi|367034680|ref|XP_003666622.1| hypothetical protein MYCTH_2311474 [Myceliophthora thermophila ATCC
42464]
gi|347013895|gb|AEO61377.1| hypothetical protein MYCTH_2311474 [Myceliophthora thermophila ATCC
42464]
Length = 575
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/342 (34%), Positives = 175/342 (51%), Gaps = 29/342 (8%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNT-SAGGTATGPYGAIDRKL 380
Y+EF + SV A+ L+GQ LLG PV+V+P+EAEKN N+ S+G + P+ +L
Sbjct: 239 YVEFKNEESVAAALQLTGQKLLGIPVIVQPTEAEKNRQARNSESSGHPNSIPF----HRL 294
Query: 381 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 440
YVGN+HF++TET L+ +FEPFG +E VQL D ++G+ +G+GFVQF A+ A +N
Sbjct: 295 YVGNIHFSITETDLQNVFEPFGELEFVQLQKD-DSGRSRGYGFVQFRDASQAREALEKMN 353
Query: 441 GKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIAT 500
G ++ GR ++V D + TA F + G A R L DR G
Sbjct: 354 G-FDLAGRPIRVGLGNDKFTPESTANLLRGFQGQNQGSAFSGAGGRGLQASNFDRAGGRD 412
Query: 501 SIAGSLGVA------PAVNGSAVNQQAI-------SLPVVGQP--AVPVPAV-TAPVIPN 544
S G+ A VN + ++ A+ P GQP + P T P+ N
Sbjct: 413 SDKGTAASALDDTDVAGVNFNNYSRDALMRKLARTDEPSTGQPERQILKPKTETQPLPVN 472
Query: 545 MAAEFIGSPSECLLLKNMFDPAMETDPDFDLEI-QGDVEEECSKYGRVKHIYVDKRSAGF 603
++ S C++L NMFDP + + E+ + +E KYG V HI VD S G
Sbjct: 473 VSMA-----SRCVVLHNMFDPTEQEGEGWIKELEEEVRQEAEEKYGHVVHIAVDPNSQGD 527
Query: 604 VYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+YL+F+ +A + ++ R+F R+ISA + Y + F
Sbjct: 528 IYLKFDKVSGGENAIKGLNGRYFDGRMISAAPVVDAVYSSLF 569
>gi|119494703|ref|XP_001264168.1| RNA splicing factor (Pad-1), putative [Neosartorya fischeri NRRL
181]
gi|119412330|gb|EAW22271.1| RNA splicing factor (Pad-1), putative [Neosartorya fischeri NRRL
181]
Length = 566
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/360 (33%), Positives = 170/360 (47%), Gaps = 80/360 (22%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN--TSAGGTATGPYGAIDRK 379
Y+EF SV AI L+GQ LLG P++ + +EAEKN N S+G P+ +
Sbjct: 221 YVEFKSEESVAPAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEASSGHNHAAPF----HR 276
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVGN+HF++TE L+ +FEPFG +E VQL D E G+ KG+GFVQF A+ A +
Sbjct: 277 LYVGNIHFSITENDLQNVFEPFGELEFVQLQKD-EAGRSKGYGFVQFRDPNQAREALEKM 335
Query: 440 NGKLEIVGRTLKV-------------------------------------------SSVT 456
NG ++ GR ++V +S
Sbjct: 336 NG-FDLAGRAIRVGLGNDKFTPDSSAQRSQSHGANQPNFQGSSFSGQGGRGIQAGGTSNF 394
Query: 457 DHVGTQDT--AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNG 514
D G +D+ A ++ DD D G+ N SR LM+KL RT A
Sbjct: 395 DRAGGRDSEKGAGASALDDTDVAGVNFNNYSRDALMRKLARTDEPAEPA----------- 443
Query: 515 SAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFD 574
A ++Q + P +PV NMA S C+LL+NMFDPA E +
Sbjct: 444 -ADDKQKVLRPKTETKPLPVNV-------NMA-------SRCVLLRNMFDPAEEEGEAWI 488
Query: 575 LEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
E++ DV EC KYG V HI +D S G +YL+F+ + +A + ++ R+F R I+A
Sbjct: 489 KELEDDVRAECEDKYGHVVHIALDPNSQGDIYLKFDRVQGGENAIKGLNGRFFGGRQITA 548
>gi|46121573|ref|XP_385341.1| hypothetical protein FG05165.1 [Gibberella zeae PH-1]
Length = 568
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 147/490 (30%), Positives = 213/490 (43%), Gaps = 138/490 (28%)
Query: 191 RERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDV 250
R RD + RE++R + ++ E E RD+RTVF Q+ + R++ EFF + G V +
Sbjct: 152 RGRDDDRRETKREEGNPQLTEDE----RDRRTVFVQQLAARLRTRELKEFFERVGPVNEA 207
Query: 251 RLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTV 310
+++ DR S+RSKGVG ++F V L G +
Sbjct: 208 QIVKDRISQRSKGVG---------------------YVEFKNEESVTQALQLTGQK---- 242
Query: 311 LDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTAT 370
++ +P+ +V+ +EAEKN N A G
Sbjct: 243 -----------------LLGIPV--------------IVQVTEAEKNRQARNPEASGPH- 270
Query: 371 GPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLE 430
P +LYVGN+HFN+TE L+ +FEPFG +E VQL D E G+ +G+GFVQF
Sbjct: 271 -PNSIPFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKD-ENGRSRGYGFVQFRDAG 328
Query: 431 HAKAAQSALNGKLEIVGRTLKV-------------------------------------- 452
A+ A +NG ++ GR ++V
Sbjct: 329 QAREALEKMNG-FDLAGRPIRVGLGNDKFTPESTANMLQRFSGQNQQNPNFQGSAFSGSG 387
Query: 453 -----SSVTDHVGTQD---TAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAG 504
+S D G +D T SA DD D G+ N SR LM+KL RT +
Sbjct: 388 GRGPQNSTFDRAGGRDNEKTGGASA-LDDTDVAGVNFNNYSRDALMRKLARTDDS----- 441
Query: 505 SLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFD 564
AP NG Q V +P + + PV NMA S C++L NMFD
Sbjct: 442 ----AP-TNGHEERQ-------VLKPKMETKPL--PVNVNMA-------SRCVVLHNMFD 480
Query: 565 PAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHM 623
P E D+ E++ DV +E SKYG V HI VD S G +YL+F+ + +A + ++
Sbjct: 481 PEEEEGTDWVKELEDDVRQEAESKYGHVVHISVDPNSKGDIYLKFDKVQGGENAIKGLNG 540
Query: 624 RWFARRLISA 633
R+F R+I A
Sbjct: 541 RYFGGRMIDA 550
>gi|429860108|gb|ELA34858.1| RNA splicing factor (pad-1) [Colletotrichum gloeosporioides Nara
gc5]
Length = 628
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/357 (33%), Positives = 177/357 (49%), Gaps = 78/357 (21%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATG--PYGAIDRK 379
Y+EF + SV A+ L+GQ LLG P++V+ +EAEKN N+ TATG P +
Sbjct: 230 YVEFKNEESVTQALQLTGQKLLGIPIIVQLTEAEKNRQVRNSE---TATGAHPNSIPFHR 286
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVGN+HFN+TE L+ +FEPFG +E VQL D + G+ +G+GFVQ+ + A+ A +
Sbjct: 287 LYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKD-DNGRSRGYGFVQYREASQAREALEKM 345
Query: 440 NGKLEIVGRTLKV----------------------------------------SSVTDHV 459
NG ++ GR ++V +S D
Sbjct: 346 NG-FDLAGRPIRVGLGNDKFTPESTANMLQRFPGQNQAYQGSAFSGAGGRGPQTSAFDRA 404
Query: 460 GTQDT--AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAV 517
G +D+ + ++ DD D G+ N SR LM+KL RT A+ NG+
Sbjct: 405 GGRDSEKSGGASALDDTDVAGVNFNNYSRDALMRKLARTDEAS------------NGADE 452
Query: 518 NQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEI 577
Q V +P + + PV +MA S C++L NMFDP E D+ E+
Sbjct: 453 RQ-------VLKPKTEIKPL--PVNVSMA-------SRCVVLHNMFDPEEEDGDDWAKEL 496
Query: 578 QGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
+ DV +E KYGRV HI VD S G +YL+F+ + +A R ++ R+F R+I A
Sbjct: 497 EDDVRQEAEKKYGRVVHIAVDPNSKGDIYLKFDKVQGGENAIRGLNGRYFGGRMIDA 553
>gi|408394044|gb|EKJ73300.1| hypothetical protein FPSE_06565 [Fusarium pseudograminearum CS3096]
Length = 568
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 147/490 (30%), Positives = 212/490 (43%), Gaps = 138/490 (28%)
Query: 191 RERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDV 250
R RD + RE++R + ++ E E RD+RTVF Q+ + R++ EFF + G V +
Sbjct: 152 RGRDDDRRETKREEGNPQLTEDE----RDRRTVFVQQLAARLRTRELKEFFERVGPVNEA 207
Query: 251 RLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTV 310
+++ DR S+RSKGVG ++F V L G +
Sbjct: 208 QIVKDRISQRSKGVG---------------------YVEFKNEESVTQALQLTGQK---- 242
Query: 311 LDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTAT 370
++ +P+ +V+ +EAEKN N A G
Sbjct: 243 -----------------LLGIPV--------------IVQVTEAEKNRQARNPEASGPH- 270
Query: 371 GPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLE 430
P +LYVGN+HFN+TE L+ +FEPFG +E VQL D E G+ +G+GFVQF
Sbjct: 271 -PNSIPFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKD-ENGRSRGYGFVQFRDAG 328
Query: 431 HAKAAQSALNGKLEIVGRTLKV-------------------------------------- 452
A+ A +NG ++ GR ++V
Sbjct: 329 QAREALEKMNG-FDLAGRPIRVGLGNDKFTPESTANMLQRFSGQNQQNPNFQGSAFSGSG 387
Query: 453 -----SSVTDHVGTQD---TAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAG 504
+S D G +D T SA DD D G+ N SR LM+KL RT +
Sbjct: 388 GRGPQNSTFDRAGGRDNEKTGGASA-LDDTDVAGVNFNNYSRDALMRKLARTDDS----- 441
Query: 505 SLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFD 564
AP NG Q V +P + PV NMA S C++L NMFD
Sbjct: 442 ----AP-TNGHEERQ-------VLKPKTETKPL--PVNVNMA-------SRCVVLHNMFD 480
Query: 565 PAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHM 623
P E D+ E++ DV +E SKYG V HI VD S G +YL+F+ + +A + ++
Sbjct: 481 PEEEEGTDWVKELEDDVRQEAESKYGHVVHISVDPNSKGDIYLKFDKVQGGENAIKGLNG 540
Query: 624 RWFARRLISA 633
R+F R+I A
Sbjct: 541 RYFGGRMIDA 550
>gi|328770116|gb|EGF80158.1| hypothetical protein BATDEDRAFT_11758 [Batrachochytrium
dendrobatidis JAM81]
Length = 389
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 169/311 (54%), Gaps = 32/311 (10%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EFY+V +V A+ ++GQ LLG P++V+ +EAE+N V ++ T ++Y
Sbjct: 85 YVEFYEVEAVSKALEMTGQKLLGIPIIVQLTEAERNRVALQAASKTVDTAA-----SRIY 139
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQ-LEHAKAAQSALN 440
VG+L +++TE + F+ FGP+E + + +D ETG KG+ FVQ+ + L
Sbjct: 140 VGSLDYSLTEQDVANAFQGFGPIEFINIHMDKETGHSKGYAFVQYVKDAWFLNIFILKLQ 199
Query: 441 GKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGG--GLALNAQSRALLMQKLDRTGI 498
++ ++ + + VT+ + A F+ DDG G +N+ SRA LM KL RT
Sbjct: 200 IRVNLISEKSQSAPVTNASNVGIASENIATFNMDDGEMEGFQMNSLSRAELMAKLART-- 257
Query: 499 ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAP--VIPNMAAEFIGSPSEC 556
P ++ ++ + AI + + T P V+P M + C
Sbjct: 258 ----------EPTLSKTSASVAAI---IFTNTYFVFDSSTKPAVVVPTM-------ETRC 297
Query: 557 LLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAAS 616
+LLKNMF+P E + ++ EI+ DV+EEC+K+G++ HI VD S G VYL+F+S ++ +
Sbjct: 298 VLLKNMFNPENEVESNWVQEIEEDVKEECTKFGKILHISVDPESHGHVYLKFDSLVSSQA 357
Query: 617 AQRAMHMRWFA 627
A +A+H R+FA
Sbjct: 358 AVKALHGRFFA 368
>gi|322694933|gb|EFY86751.1| RNA splicing factor Pad-1 [Metarhizium acridum CQMa 102]
Length = 562
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/354 (33%), Positives = 172/354 (48%), Gaps = 74/354 (20%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF D +V A+ L+G+ L G P++VK +EAEKN NT + T+ P +LY
Sbjct: 223 YVEFKDEETVQKALQLTGKPLAGIPIIVKLTEAEKNRQARNTES--TSGNPNSVPFHRLY 280
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VGN+HFN+TE L+ +FEPFG +E VQL D + G+ +G+GFVQF A+ A +NG
Sbjct: 281 VGNIHFNVTEQDLQAVFEPFGELEYVQLQKD-DNGRSRGYGFVQFRDATQAREALEKMNG 339
Query: 442 KLEIVGRTLKV---------------------------------------SSVTDHVGTQ 462
++ GR ++V +S D G +
Sbjct: 340 -FDLAGRPIRVGLGNDKFTPESTANLMHRFSGQNNFQGSAFSGAGGRGGQASTFDRAGGR 398
Query: 463 DT--AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQ 520
D+ A ++ DD D G+ N SR LM+KL RT A+ NG Q
Sbjct: 399 DSDKAGGASALDDTDVAGVNFNNYSRDALMRKLARTDEAS------------NGR--EDQ 444
Query: 521 AISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGD 580
+ P A P+ PV NMA S C++L NMFDP E D+ E++ D
Sbjct: 445 VVVKPKT--EAKPL-----PVNVNMA-------SRCVVLHNMFDPEEEEGDDWVKELEDD 490
Query: 581 VEEECSK-YGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
+ E + YG V HI VD S G VYL+F+ + +A + ++ R+F R+I+A
Sbjct: 491 IRAEAERQYGHVVHIAVDPNSKGDVYLKFDKVQGGENAIKGLNGRYFGGRMINA 544
>gi|70996384|ref|XP_752947.1| RNA splicing factor (Pad-1) [Aspergillus fumigatus Af293]
gi|66850582|gb|EAL90909.1| RNA splicing factor (Pad-1), putative [Aspergillus fumigatus Af293]
gi|159131701|gb|EDP56814.1| RNA splicing factor (Pad-1), putative [Aspergillus fumigatus A1163]
Length = 566
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/360 (33%), Positives = 170/360 (47%), Gaps = 80/360 (22%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN--TSAGGTATGPYGAIDRK 379
Y+EF SV AI L+GQ LLG P++ + +EAEKN N S+G P+ +
Sbjct: 221 YVEFKSEESVAPAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEASSGHNHAAPF----HR 276
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVGN+HF++TE L+ +FEPFG +E VQL D E G+ KG+GFVQF A+ A +
Sbjct: 277 LYVGNIHFSITENDLQNVFEPFGELEFVQLQKD-EAGRSKGYGFVQFRDPNQAREALEKM 335
Query: 440 NGKLEIVGRTLKV-------------------------------------------SSVT 456
NG ++ GR ++V +S
Sbjct: 336 NG-FDLAGRAIRVGLGNDKFTPDSSAQRSQSHGANQPNFQGSSFSGQGGRGIQAGGTSNF 394
Query: 457 DHVGTQDT--AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNG 514
D G +D+ A ++ DD D G+ N SR LM+KL RT A
Sbjct: 395 DRAGGRDSEKGAGASALDDTDVAGVNFNNYSRDALMRKLARTDEPAEPA----------- 443
Query: 515 SAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFD 574
A ++Q + P +PV NMA S C+LL+NMFDPA E +
Sbjct: 444 -ADDKQKVLRPKTETKPLPVNV-------NMA-------SRCVLLRNMFDPAEEEGEAWI 488
Query: 575 LEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
E++ DV EC KYG V HI +D S G +YL+F+ + +A + ++ R+F R I+A
Sbjct: 489 KELEDDVRAECEDKYGHVVHIALDPNSQGDIYLKFDRVQGGENAIKGLNGRFFGGRQITA 548
>gi|443695245|gb|ELT96187.1| hypothetical protein CAPTEDRAFT_148377 [Capitella teleta]
Length = 277
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/269 (38%), Positives = 150/269 (55%), Gaps = 20/269 (7%)
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +F+PFG ++ ++L + ETG+ +G+GF+ F E AK A
Sbjct: 2 RLYVGSLHFNITEEMLRGIFDPFGKIDDIKLMKNHETGRSQGYGFITFHTAEDAKKALEQ 61
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTG 497
LNG E+ GR +KV VT+ +G + T + D DD D G+ L A R LM KL + TG
Sbjct: 62 LNG-FELAGRPMKVGHVTERLG-ETTGPSALDTDDMDRAGIDLGATGRLQLMAKLAEGTG 119
Query: 498 IATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECL 557
P V +A+N I P A +AA ++C
Sbjct: 120 FEI---------PQVAANALNMNGI-------PHSIQVESAAACAAAIAASAPPIATQCF 163
Query: 558 LLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAAS 616
+L NMFDP E +++EIQ DV EEC+K+G V HIYVDK S G VY++ S AA +
Sbjct: 164 MLSNMFDPITEATTTWEIEIQDDVIEECNKHGGVLHIYVDKASPQGNVYVKCPSISAAVA 223
Query: 617 AQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+ A+H R+FA ++I+A ++ +Y + F
Sbjct: 224 SVNALHGRYFAGKVITAAYVPLPNYHSLF 252
>gi|296820488|ref|XP_002849949.1| RNA splicing factor Pad-1 [Arthroderma otae CBS 113480]
gi|238837503|gb|EEQ27165.1| RNA splicing factor Pad-1 [Arthroderma otae CBS 113480]
Length = 595
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/360 (33%), Positives = 173/360 (48%), Gaps = 77/360 (21%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID-RKL 380
Y+EF + SVP+AI L+GQ LLG P++ + +EAEKN N + A + AI +L
Sbjct: 247 YVEFKNEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPDS--HANSNHQAIPFHRL 304
Query: 381 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 440
YVGN+HF++TE+ L+ +FEPFG ++ VQL + E G+ KG+GFVQF A+ A +N
Sbjct: 305 YVGNIHFSITESDLQNVFEPFGELDFVQLQRE-EAGRSKGYGFVQFRDPNQAREALEKMN 363
Query: 441 GKLEIVGRTLKV--------------------------SSVTDH---------------- 458
G ++ GR ++V SS + H
Sbjct: 364 G-FDLAGRPIRVGLGNDKFSHDPAQLMQRLQQQGHNQGSSYSHHGGRGANSGGSSGGNFD 422
Query: 459 -VGTQDT---AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNG 514
G +D A ++ DD D G+ N SR LM+KL RT PA
Sbjct: 423 RAGGRDNDKGAGGASALDDTDVAGVNFNNYSRDALMRKLARTD-----------EPAAEP 471
Query: 515 SAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFD 574
+ ++ P A PV NMA S C+LL+NMFDPA E +
Sbjct: 472 APDEKRKA-------PKARTEAKPLPVTVNMA-------SRCVLLRNMFDPAQEEGESWV 517
Query: 575 LEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
E++ DV EC KYG V HI +D + G +YL+F+ + +A + ++ R+F R ISA
Sbjct: 518 KELEDDVRAECEEKYGHVVHISLDPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 577
>gi|332249061|ref|XP_003273679.1| PREDICTED: RNA-binding protein 39 [Nomascus leucogenys]
Length = 432
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/299 (37%), Positives = 160/299 (53%), Gaps = 22/299 (7%)
Query: 351 PSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLP 410
P+E + +N G+A GP +LYVG+LHFN+TE LR +FEPFG +E +QL
Sbjct: 137 PAEKNRAAAMANNLQKGSA-GPM-----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLM 190
Query: 411 LDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSAD 470
+D ETG+ KG+GF+ F+ E AK A LNG E+ GR +KV VT+ D ++ S+
Sbjct: 191 MDSETGRSKGYGFITFSDSECAKKALEQLNG-FELAGRPMKVGHVTERT---DASSASSF 246
Query: 471 FDDDDG--GGLALNAQSRALLMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVV 527
D D+ G+ L R LM +L + TG L + PA + +++ V
Sbjct: 247 LDSDELERTGIDLGTTGRLQLMARLAEGTG--------LQIPPAAQQALQMSGSLAFGAV 298
Query: 528 GQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSK 587
+ T AA ++C L NMF+P E + +D EI+ DV EEC+K
Sbjct: 299 ADLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNK 358
Query: 588 YGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+G V HIYVDK SA G VY++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 359 HGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 417
>gi|322704095|gb|EFY95694.1| RNA splicing factor Pad-1 [Metarhizium anisopliae ARSEF 23]
Length = 558
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/354 (33%), Positives = 172/354 (48%), Gaps = 74/354 (20%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF D +V A+ L+G+ L G P++VK +EAEKN NT + T+ P +LY
Sbjct: 219 YVEFKDEETVQKALQLTGKPLAGIPIIVKLTEAEKNRQARNTES--TSGNPNSVPFHRLY 276
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VGN+HFN+TE L+ +FEPFG +E VQL D + G+ +G+GFVQF A+ A +NG
Sbjct: 277 VGNIHFNVTEQDLQAVFEPFGELEYVQLQKD-DNGRSRGYGFVQFRDATQAREALEKMNG 335
Query: 442 KLEIVGRTLKV---------------------------------------SSVTDHVGTQ 462
++ GR ++V +S D G +
Sbjct: 336 -FDLAGRPIRVGLGNDKFTPESTANLMHRFSGQNNFQGSAFSGAGGRGGQASTFDRAGGR 394
Query: 463 DT--AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQ 520
D+ A ++ DD D G+ N SR LM+KL RT A+ NG Q
Sbjct: 395 DSDKAGGASALDDTDVAGVNFNNYSRDALMRKLARTDEAS------------NGR--EDQ 440
Query: 521 AISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGD 580
+ P A P+ PV NMA S C++L NMFDP E D+ E++ D
Sbjct: 441 VVVKPKT--EAKPL-----PVNVNMA-------SRCVVLHNMFDPEEEEGDDWVKELEDD 486
Query: 581 VEEECSK-YGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
+ E + YG V HI VD S G VYL+F+ + +A + ++ R+F R+I+A
Sbjct: 487 IRAEAERQYGHVVHIAVDPNSKGDVYLKFDKVQGGENAIKGLNGRYFGGRMINA 540
>gi|315043566|ref|XP_003171159.1| RNA-binding protein rsd1 [Arthroderma gypseum CBS 118893]
gi|311344948|gb|EFR04151.1| RNA-binding protein rsd1 [Arthroderma gypseum CBS 118893]
Length = 589
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 171/362 (47%), Gaps = 81/362 (22%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNT---SAGGTATGPYGAIDR 378
Y+EF + SVP+AI L+GQ LLG P++ + +EAEKN N S+ + P+
Sbjct: 241 YVEFKNEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPDAHSSNNQQSIPF----H 296
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVGN+HF++TE+ L+ +FEPFG ++ VQL + E G+ KG+GFVQF A+ A
Sbjct: 297 RLYVGNIHFSITESDLQNVFEPFGELDFVQLQRE-EAGRSKGYGFVQFRDPNQAREALEK 355
Query: 439 LNGKLEIVGRTLKV--------------------------SSVTDHVG------------ 460
+NG ++ GR ++V SS + H G
Sbjct: 356 MNG-FDLAGRPIRVGLGNDKFSHDPAQLMQRLQQQGHNQGSSYSHHGGRGANAGGSSGGN 414
Query: 461 --------TQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAV 512
A ++ DD D G+ N SR LM+KL RT PA
Sbjct: 415 FDRAGGRDNDKGAGGASALDDTDVAGVNFNNYSRDALMRKLARTD-----------EPAA 463
Query: 513 NGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPD 572
+ ++ P A PV NMA S C+LL+NMFDPA E
Sbjct: 464 EPAPDEKRKA-------PKARTEAKPLPVTVNMA-------SRCVLLRNMFDPAQEEGES 509
Query: 573 FDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLI 631
+ E++ DV EC KYG V HI +D + G +YL+F+ + +A + ++ R+F R I
Sbjct: 510 WVKELEDDVRAECEEKYGHVVHISLDPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQI 569
Query: 632 SA 633
SA
Sbjct: 570 SA 571
>gi|358370208|dbj|GAA86820.1| RNA splicing factor (Pad-1) [Aspergillus kawachii IFO 4308]
Length = 571
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/360 (33%), Positives = 173/360 (48%), Gaps = 80/360 (22%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN--TSAGGTATGPYGAIDRK 379
Y+EF +V AI L+GQ LLG P++ + +EAEKN N S+G P+ +
Sbjct: 226 YVEFKSEDAVAPAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEASSGNNHAAPF----HR 281
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVGN+HF++TE+ L+ +FEPFG +E VQL D ETG+ +G+GFVQF A+ A +
Sbjct: 282 LYVGNIHFSITESDLQNVFEPFGELEFVQLQKD-ETGRSRGYGFVQFRDPNQAREALEKM 340
Query: 440 NGKLEIVGRTLKV-------------------------------------------SSVT 456
NG ++ GR ++V +S
Sbjct: 341 NG-FDLAGRAIRVGLGNDKFTPDSNAQRMQSQGANQHNFQGSLFSGHGGRGVQAGGTSNF 399
Query: 457 DHVGTQDT--AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNG 514
D G +D+ A ++ DD D G+ N SR LM+KL RT A
Sbjct: 400 DRAGGRDSEKGAGASALDDTDVAGVNFNNYSRDALMRKLARTDEPAEPA----------- 448
Query: 515 SAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFD 574
A +QQ + P A P+ PV NMA S C++L+NMFDP E +
Sbjct: 449 -ADDQQKVLRPKT--EAKPL-----PVNVNMA-------SRCVMLRNMFDPNEEEGEAWI 493
Query: 575 LEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
E++ DV EC KYG V HI +D S G +YL+F+ + +A + ++ R+F R I+A
Sbjct: 494 KELEDDVRAECEDKYGHVVHIALDPNSQGDIYLKFDRVQGGENAIKGLNGRFFGGRQITA 553
>gi|341877935|gb|EGT33870.1| hypothetical protein CAEBREN_20987 [Caenorhabditis brenneri]
Length = 528
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 136/466 (29%), Positives = 209/466 (44%), Gaps = 108/466 (23%)
Query: 193 RDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRL 252
RD+ R K +E A+ ERDQRT+ Q+ RD+ EFFS G VRDVR+
Sbjct: 93 RDVMPFNPRHSPPKNAKLELSAE-ERDQRTLLIMQIARDTRPRDLEEFFSSVGAVRDVRI 151
Query: 253 IMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLD 312
I D + RSKG+ C V
Sbjct: 152 ITDSRTGRSKGI--------------------CYV------------------------- 166
Query: 313 PATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAG------ 366
EF+D SVP+ +AL+GQ L+G P+ ++ + AE+N +++ A
Sbjct: 167 -----------EFWDEESVPLGLALNGQRLMGAPLQIQRTCAERNRAANSSMASTLGFVA 215
Query: 367 -GTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQ 425
G A GP + V NLH + L+ +F+ FG +E +++ + G +GF +
Sbjct: 216 PGAAKGP-----AHVVVENLHPKIDAKMLQGIFDAFGRIEKLEMETE-HNGDNRGFAVIS 269
Query: 426 FAQLEHAKAAQSALNGKLEIVGRTLKVS----SVTDHVGTQDTAAKSADFDDDDGGGLAL 481
F E A+ A LN E+ GR +++S +V H + + + + D D G +L
Sbjct: 270 FKNSEEAQKACEQLN-NFELAGRNIRLSIKQDAVPQHKKEEASIHQRSLDDIGDRQGFSL 328
Query: 482 NAQSRALLMQKLDR-TGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAP 540
A R LM KL + TG + S +A G N Q
Sbjct: 329 GAGGRQQLMAKLAQGTGSGMELTASAQMAAQHAG---NSQ-------------------- 365
Query: 541 VIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS 600
IP++A ++C LL NMFDP+ ET+P++D++I+ DV E+C ++G H++VDK S
Sbjct: 366 -IPSIA-------TQCFLLSNMFDPSKETEPNWDVDIREDVIEQCLQHGGALHVFVDKGS 417
Query: 601 -AGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
G VY++ S A A A+H RWF+ ++I+A ++ Y F
Sbjct: 418 EQGNVYVKCPSIAIAHQAVSALHGRWFSGKVITANYVPVNSYHDLF 463
>gi|302499164|ref|XP_003011578.1| hypothetical protein ARB_02131 [Arthroderma benhamiae CBS 112371]
gi|291175130|gb|EFE30938.1| hypothetical protein ARB_02131 [Arthroderma benhamiae CBS 112371]
Length = 594
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 170/362 (46%), Gaps = 81/362 (22%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA---GGTATGPYGAIDR 378
Y+EF + SVP+AI L+GQ LLG P++ + +EAEKN N A + P+
Sbjct: 246 YVEFKNEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPDAHSNNNQQSIPF----H 301
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVGN+HF++TE+ L+ +FEPFG ++ VQL + E G+ KG+GFVQF A+ A
Sbjct: 302 RLYVGNIHFSITESDLQNVFEPFGELDFVQLQRE-EAGRSKGYGFVQFRDPNQAREALEK 360
Query: 439 LNGKLEIVGRTLKV--------------------------SSVTDHVG------------ 460
+NG ++ GR ++V SS + H G
Sbjct: 361 MNG-FDLAGRPIRVGLGNDKFSHDPAQLMQRLQQQGHNQGSSYSHHGGRGANAGGSSGGN 419
Query: 461 --------TQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAV 512
A ++ DD D G+ N SR LM+KL RT PA
Sbjct: 420 FDRAGGRDNDKGAGGASALDDTDVAGVNFNNYSRDALMRKLARTD-----------EPAA 468
Query: 513 NGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPD 572
+ ++ P A PV NMA S C+LL+NMFDPA E
Sbjct: 469 EPAPDEKRKA-------PKARTEAKPLPVTVNMA-------SRCVLLRNMFDPAQEEGES 514
Query: 573 FDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLI 631
+ E++ DV EC KYG V HI +D + G +YL+F+ + +A + ++ R+F R I
Sbjct: 515 WVKELEDDVRAECEEKYGHVVHISLDPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQI 574
Query: 632 SA 633
SA
Sbjct: 575 SA 576
>gi|4530579|gb|AAD22102.1| Pad-1 [Neurospora crassa]
Length = 575
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 176/359 (49%), Gaps = 80/359 (22%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 379
Y+EF + SV A+ L+GQ LLG PV+V+ +EAEKN + + TS + P+ +
Sbjct: 227 YVEFKNEDSVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIPF----HR 282
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVGN+HF++TE L+ +FEPFG +E VQL D + G+ +G+GFVQF A+ A +
Sbjct: 283 LYVGNIHFSITEQDLQNVFEPFGELEFVQLQKD-DNGRSRGYGFVQFRDAGQAREALEKM 341
Query: 440 NGKLEIVGRTLKV------------------------------------------SSVTD 457
NG ++ GR ++V +S D
Sbjct: 342 NG-FDLAGRPIRVGLGNDKFTPESTANLLQRFQGQNHHQQFQGSAFSGAGGRGPATSNFD 400
Query: 458 HVGTQDT--AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGS 515
G +D ++ DD D GG+ N SR LM+KL RT PA S
Sbjct: 401 RAGARDNEKGTGASALDDTDVGGVNFNNYSRDALMRKLART----------DEPPA---S 447
Query: 516 AVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDL 575
+ ++ I P +PV NMA S C++L NMFDPA E ++
Sbjct: 448 VIPERQILKPKTETKPLPVNV-------NMA-------SRCVVLHNMFDPAEEEGENWIK 493
Query: 576 EIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
E++ DV EE +KYG V HI +D SAG +YL+F+ + +A + ++ R+F R+I+A
Sbjct: 494 ELEDDVREEAEAKYGHVVHISLDPNSAGDIYLKFDKVQGGENAIKGLNGRYFGGRMITA 552
>gi|119596572|gb|EAW76166.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_e [Homo
sapiens]
Length = 445
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 132/379 (34%), Positives = 180/379 (47%), Gaps = 94/379 (24%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 193 SKGI---------------------AYVEFVDVSSV------------------------ 207
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
P+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 208 -----------PLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 250
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 251 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 310
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 311 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 366
Query: 496 TGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVIPNMA 546
TG+ A ++GSL S V I L + Q A + +A
Sbjct: 367 TGLQIPPAAQQALQMSGSLAFGAVAEFSFV----IDLQTRLSQQTEASALAAAASVQPLA 422
Query: 547 AEFIGSPSECLLLKNMFDP 565
++C L NMF+P
Sbjct: 423 -------TQCFQLSNMFNP 434
>gi|449296279|gb|EMC92299.1| hypothetical protein BAUCODRAFT_38330 [Baudoinia compniacensis UAMH
10762]
Length = 634
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 122/373 (32%), Positives = 176/373 (47%), Gaps = 85/373 (22%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF D SV AI L+GQ LLG P++ + +EAEKN +T GTAT G +LY
Sbjct: 292 YVEFKDEESVQKAIQLTGQKLLGIPIIAQLTEAEKNRQARHTE--GTATQSNGIPFHRLY 349
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VGN+HF++TE L+ +FEPFG +E VQL + E G+ KG+GFVQF AK A +NG
Sbjct: 350 VGNIHFSITEDDLKNVFEPFGELEFVQLQKE-EQGRSKGYGFVQFIDPAQAKEALEKMNG 408
Query: 442 KLEIVGRTLKVSSVTD------------------------------------HVGTQ--- 462
E+ GR ++V D H G Q
Sbjct: 409 -FELAGRPIRVGLGNDKFTPESTQSLLQRFASQGQAAAFQGSSFSGMGGRGAHAGGQANF 467
Query: 463 --------DTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNG 514
D ++ DD D G+ + SR LM+KL RT + VAP
Sbjct: 468 DRASGRDADKTGGASALDDTDVAGVNFSNYSRDALMRKLARTDDSEE-----KVAP---- 518
Query: 515 SAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFD 574
Q+ + P V QPA PS C+LLKN+++ A ET+P +
Sbjct: 519 -KTMQKKPTGP-VDQPA---------------------PSRCVLLKNVYNQAEETEPGWQ 555
Query: 575 LEIQGDVEEECS-KYGRVKHIYVD-KRSAGFVYLRFESTEAAASAQRAMHMRWFARRLIS 632
E++ DV+ EC KYG+V HI + + G +Y++F+ + +A R ++ R + R+I+
Sbjct: 556 KELEEDVKVECDEKYGQVVHIGLALDNNDGEIYIKFDRKQGGENAIRGLNGRMYGGRMIT 615
Query: 633 AIFMKPEDYEAKF 645
A ++ Y F
Sbjct: 616 AQYVVDAVYNMNF 628
>gi|190402270|gb|ACE77680.1| RNA binding motif protein 39 isoform a (predicted) [Sorex araneus]
Length = 435
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 127/367 (34%), Positives = 175/367 (47%), Gaps = 82/367 (22%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 193 SKGI---------------------AYVEFVDVSSV------------------------ 207
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
P+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 208 -----------PLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 250
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 251 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 310
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 311 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 366
Query: 496 TGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAA 547
TG+ A ++GSL + Q ++ VP+P +M A
Sbjct: 367 TGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEGKMITAAYVPLPTYHNLFPDSMTA 426
Query: 548 EFIGSPS 554
+ PS
Sbjct: 427 TQLLVPS 433
>gi|302664299|ref|XP_003023781.1| hypothetical protein TRV_02070 [Trichophyton verrucosum HKI 0517]
gi|291187796|gb|EFE43163.1| hypothetical protein TRV_02070 [Trichophyton verrucosum HKI 0517]
Length = 592
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 170/362 (46%), Gaps = 81/362 (22%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA---GGTATGPYGAIDR 378
Y+EF + SVP+AI L+GQ LLG P++ + +EAEKN N A + P+
Sbjct: 244 YVEFKNEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPDAHSNNNQQSIPF----H 299
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVGN+HF++TE+ L+ +FEPFG ++ VQL + E G+ KG+GFVQF A+ A
Sbjct: 300 RLYVGNIHFSITESDLQNVFEPFGELDFVQLQRE-EAGRSKGYGFVQFRDPNQAREALEK 358
Query: 439 LNGKLEIVGRTLKV--------------------------SSVTDHVG------------ 460
+NG ++ GR ++V SS + H G
Sbjct: 359 MNG-FDLAGRPIRVGLGNDKFSHDPAQLMQRLQQQGHNQGSSYSHHGGRGANTGGSSGGN 417
Query: 461 --------TQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAV 512
A ++ DD D G+ N SR LM+KL RT PA
Sbjct: 418 FDRAGGRDNDKGAGGASALDDTDVAGVNFNNYSRDALMRKLARTD-----------EPAA 466
Query: 513 NGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPD 572
+ ++ P A PV NMA S C+LL+NMFDPA E
Sbjct: 467 EPAPDEKRKA-------PKARTEAKPLPVTVNMA-------SRCVLLRNMFDPAQEEGES 512
Query: 573 FDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLI 631
+ E++ DV EC KYG V HI +D + G +YL+F+ + +A + ++ R+F R I
Sbjct: 513 WVKELEDDVRAECEEKYGHVVHISLDPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQI 572
Query: 632 SA 633
SA
Sbjct: 573 SA 574
>gi|407918973|gb|EKG12232.1| hypothetical protein MPH_10639 [Macrophomina phaseolina MS6]
Length = 602
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/363 (33%), Positives = 176/363 (48%), Gaps = 82/363 (22%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 379
Y+EF + SVP AI L+GQ L+G P++ + +EAEKN + + G P+ +
Sbjct: 255 YVEFKNEESVPAAIQLTGQKLMGIPIIAQLTEAEKNRQARTGDGNNGNNNGVPF----HR 310
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVGN+HF++TE+ L+ +FEPFG +E VQL + E G+ +G+GFVQF AK A +
Sbjct: 311 LYVGNIHFSITESDLQNVFEPFGELEFVQLQKE-EGGRSRGYGFVQFRDPAQAKEALEKM 369
Query: 440 NGKLEIVGRTLKV---------------------------------------------SS 454
NG ++ GR ++V
Sbjct: 370 NG-FDLAGRPIRVGLGNDKFTPESTANLLQRFNGQGPPNFQGSAFSGSGGRGAHAGGSGG 428
Query: 455 VTDHVGTQDT---AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPA 511
D G +D A ++ DD D G+ N SR LM+KL RT PA
Sbjct: 429 TFDRAGGRDNDKGAGGASALDDTDVAGVNFNNYSRDALMRKLARTD-----------EPA 477
Query: 512 VNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDP 571
A Q+ I +PAV A T PV N A S C++LKNMFDPA E
Sbjct: 478 DTNGADKQKII------KPAVQA-ARTLPVSVNQA-------SRCVVLKNMFDPAEEEGE 523
Query: 572 DFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRL 630
+ E++ DV+EEC +KYG V HI +D + G +Y++F++ + +A + ++ R+F R
Sbjct: 524 SWMKELEDDVKEECQAKYGTVVHIALDPNTQGDIYVKFDTVQGGENAIKGLNGRFFGGRQ 583
Query: 631 ISA 633
I+A
Sbjct: 584 ITA 586
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 206 KKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG 265
K+ P + ERD+RTVF Q+ + +D+ FF K G V++ +++ DR S RSKGVG
Sbjct: 195 KRSSSPPLTEDERDRRTVFVQQLAARLRTKDLIAFFEKVGPVKEAQIVKDRVSGRSKGVG 254
>gi|367054118|ref|XP_003657437.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
gi|347004703|gb|AEO71101.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
Length = 573
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 119/345 (34%), Positives = 178/345 (51%), Gaps = 32/345 (9%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNT-SAGGTATGPYGAIDRKL 380
Y+EF + SV A+ L+GQ LLG PV+V+P+EAEKN NT S+G + P+ +L
Sbjct: 234 YVEFKNEESVAAALQLTGQKLLGIPVIVQPTEAEKNRQVRNTESSGHPNSVPF----HRL 289
Query: 381 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 440
YVGN+HF++TET L+ +FEPFG +E VQL D ++G+ +G+GFVQF A+ A +N
Sbjct: 290 YVGNIHFSITETDLQNVFEPFGELEFVQLQKD-DSGRSRGYGFVQFRDAGQAREALEKMN 348
Query: 441 GKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDD---GGGLALNAQSRALLMQKLDRTG 497
G ++ GR ++V D + TA F + G A R + DR G
Sbjct: 349 G-FDLAGRPIRVGLGNDKFTPESTANLLRGFQGQNQQYQGSAFSGAGGRGPQVSNFDRAG 407
Query: 498 IATSIAGSLGVA------PAVNGSAVNQQAI-------SLPVVGQP--AVPVPAV-TAPV 541
S G+ A VN + ++ A+ P GQP + P T P+
Sbjct: 408 GRDSDKGTGASALDDTDVAGVNFNNYSRDALMRKLARTDEPTNGQPERQILKPKTETKPM 467
Query: 542 IPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEI-QGDVEEECSKYGRVKHIYVDKRS 600
N++ S C++L NMFDPA + D+ E+ + +E KYG V HI VD S
Sbjct: 468 PVNVSMA-----SRCVVLHNMFDPAEQEGEDWAKELEEEVRQEAEEKYGHVVHIAVDTNS 522
Query: 601 AGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
G +YL+F+ + +A + ++ R+F R+ISA + Y + F
Sbjct: 523 QGDIYLKFDKVQGGENAIKGLNGRYFDGRMISAAPVVDAVYSSLF 567
>gi|119596573|gb|EAW76167.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Homo
sapiens]
Length = 423
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 171/341 (50%), Gaps = 83/341 (24%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 193 SKGI---------------------AYVEFVDVSSV------------------------ 207
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
P+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 208 -----------PLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 250
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 251 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 310
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 311 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 366
Query: 496 TGI--------ATSIAGSLGVAPAVN-GSAVNQQAISLPVV 527
TG+ A ++GSL + + ++QQ +L V+
Sbjct: 367 TGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEALFVI 407
>gi|388852481|emb|CCF53883.1| related to RNA-binding region containing protein 2 [Ustilago
hordei]
Length = 678
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 137/467 (29%), Positives = 211/467 (45%), Gaps = 88/467 (18%)
Query: 212 PEADPERDQRTVFAYQMPLKATERDVYEFFSKA---GKVRDVRLIMDRNSRRSKG----- 263
PE D + ++R+VF Q+ + ++RD+ EFF G V+DVR++MDR +RRSKG
Sbjct: 266 PEID-DYEERSVFCAQLSARLSQRDLGEFFEDHLGEGAVQDVRIVMDRLTRRSKGVGYVE 324
Query: 264 ------VGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETY---TVLDPA 314
V AI + G L I +++ G + GD + PA
Sbjct: 325 FAARELVPKAIEL--SGKDLFGIPI----IVQRTDAPRNGPAYAGPGDASARNGLTPHPA 378
Query: 315 TVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGP-Y 373
+ R + + P+ + G P+ + V + GP
Sbjct: 379 VPQLDPRVL-----ANAPLPMQYH---TAGAPIHMN--------VAPPQAPRAPRPGPNM 422
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+ +LYVG+LHF++T+ ++ +FEPFG +E V L + TG+ KGF F+QF E AK
Sbjct: 423 PNTEARLYVGSLHFSLTDENVKAVFEPFGEIEYVDLHREPGTGKSKGFCFIQFKHAEDAK 482
Query: 434 AAQSALNGKLEIVGRTLKVSSV----TDHVGTQDTAAKSADFDD----------DDGGGL 479
A +NG E+ GR ++V +V T G+ + DDGGG
Sbjct: 483 KALEQMNG-FELAGRAIRVGNVNAKGTGSAGSYSNGSCPGSEGGGHLPQLTSAFDDGGGA 541
Query: 480 ALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTA 539
LN + RA LM+KL R P+ + T+
Sbjct: 542 GLNPERRAALMEKLARN-------------------------------NDPSPTISEATS 570
Query: 540 PVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDK 598
+I A S S LLLKNMF+PA ET+ +D ++ DV++EC +KYG V I+V+K
Sbjct: 571 AMIQERPAGIPESTSTSLLLKNMFNPAEETEQGWDKDLAEDVKDECHAKYGAVTSIHVEK 630
Query: 599 RSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
SAG VY+ F + + + A ++ R+F + ISA ++ +AK
Sbjct: 631 DSAGEVYVTFANLDGSRKALEGLNGRFFGGKPISAQYIPDAFVQAKL 677
>gi|380088391|emb|CCC13655.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 606
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 117/329 (35%), Positives = 164/329 (49%), Gaps = 51/329 (15%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF V A+ L+GQ LLG PV+V+ +EAEKN T + T P +LY
Sbjct: 230 YVEFKSEEHVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTES--TGHHPNSIPFHRLY 287
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF--------------A 427
VGN+HF++TE L+ +FEPFG +E VQL D + G+ +G+GFVQ+
Sbjct: 288 VGNIHFSITEQDLQNVFEPFGELEFVQLQKD-DNGRSRGYGFVQYFTPESTANLLQRFQG 346
Query: 428 QLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDT--AAKSADFDDDDGGGLALNAQS 485
Q H + SA +G G +S D G +D ++ DD D G+ N S
Sbjct: 347 QNHHQQFQGSAFSG----AGGRGPATSNFDRAGARDNEKGTGASALDDTDVAGVNFNNYS 402
Query: 486 RALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNM 545
R LM+KL RT PA S V + I P +PV NM
Sbjct: 403 RDALMRKLART----------DEPPA---SVVPDRQILKPKTETKPLPVNV-------NM 442
Query: 546 AAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFV 604
A S C++L NMFDPA E D+ E++ DV EE +KYG V HI +D SAG +
Sbjct: 443 A-------SRCVVLHNMFDPAEEEGEDWIKELEDDVREEAEAKYGHVVHISLDPNSAGDI 495
Query: 605 YLRFESTEAAASAQRAMHMRWFARRLISA 633
YL+F+ + +A + ++ R+F R+I+A
Sbjct: 496 YLKFDKVQGGENAIKGLNGRYFGGRMITA 524
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 437
R ++V L + +L++ FE GPV Q+ D + + KG G+V+F EH +AA
Sbjct: 185 RTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKSEEHVQAA-- 242
Query: 438 ALNGKLEIVGRTL 450
L++ G+ L
Sbjct: 243 -----LQLTGQKL 250
>gi|226469234|emb|CAX70096.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 327
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 111/331 (33%), Positives = 172/331 (51%), Gaps = 37/331 (11%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF +V S +A+ L+G LLG P+ ++ S AEKN V + S + G + KLY
Sbjct: 13 YVEFREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRVSATPSLPRPSQQNKGPM--KLY 70
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
+G+LH+N+TE L+ +FEPFG +E ++L D T + +G+GFV + + AK A LNG
Sbjct: 71 IGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPATNRSQGYGFVTYVNSDDAKKALDQLNG 130
Query: 442 KLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATS 501
E+ GR +KV+ VT+ ++ + D D+ D G+ L R LM KL
Sbjct: 131 -FELAGRPMKVNHVTER--SEYACLSALDNDEADRSGVDLGTTGRLALMAKLAEG----- 182
Query: 502 IAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVI----PNMAAEFIGSP--SE 555
G + + A++ +GQ P++ ++ I P ++
Sbjct: 183 -----------TGLEIPKAALAQLHIGQ--------NNPILGSAGSVSSSSAIAPPVCTQ 223
Query: 556 CLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAA 614
C +L NMFDP + T F+ EI+ DV EEC+K G HI+VD+ SA G VY++ S A
Sbjct: 224 CFMLSNMFDPHVATHSVFE-EIRDDVIEECTKAGGCLHIFVDRTSAQGNVYVKCPSIAVA 282
Query: 615 ASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+H R+F+ RLI+A ++ +Y F
Sbjct: 283 TQCVNMLHGRYFSGRLITAAYVPLINYHQLF 313
>gi|256082942|ref|XP_002577710.1| splicing factor [Schistosoma mansoni]
gi|360043601|emb|CCD81147.1| putative splicing factor [Schistosoma mansoni]
Length = 327
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 111/331 (33%), Positives = 172/331 (51%), Gaps = 37/331 (11%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF +V S +A+ L+G LLG P+ ++ S AEKN V + S + G + KLY
Sbjct: 13 YVEFREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRVSATPSLPRPSQQNRGPM--KLY 70
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
+G+LH+N+TE L+ +FEPFG +E ++L D T + +G+GFV + + AK A LNG
Sbjct: 71 IGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPTTNRSQGYGFVTYVNSDDAKKALDQLNG 130
Query: 442 KLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATS 501
E+ GR +KV+ VT+ ++ + D D+ D G+ L R LM KL
Sbjct: 131 -FELAGRPMKVNHVTER--SEYACLSALDNDEADRSGVDLGTTGRLALMAKLAEG----- 182
Query: 502 IAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVI----PNMAAEFIGSP--SE 555
G + + A++ +GQ P++ ++ I P ++
Sbjct: 183 -----------TGLEIPKAALAQLHIGQ--------NNPILGSAGSVSSSSAIAPPVCTQ 223
Query: 556 CLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAA 614
C +L NMFDP + T F+ EI+ DV EEC+K G HI+VD+ SA G VY++ S A
Sbjct: 224 CFMLSNMFDPHVATHSVFE-EIRDDVIEECTKAGGCLHIFVDRTSAQGNVYVKCPSIAVA 282
Query: 615 ASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+H R+F+ RLI+A ++ +Y F
Sbjct: 283 TQCVNMLHGRYFSGRLITAAYVPLINYHQLF 313
>gi|403359392|gb|EJY79355.1| Splicing factor, putative [Oxytricha trifallax]
Length = 508
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 154/567 (27%), Positives = 247/567 (43%), Gaps = 160/567 (28%)
Query: 110 ERSRER-----REKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRR 164
+R +R R + E ERR+ RDR +E +RDG+
Sbjct: 70 DRKHKRRSGSRRRDDSEEERRKNRDRNG-KEGDRDGK----------------------- 105
Query: 165 ERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVF 224
E E E++ +++E L + ++ E++R E + +RD TV
Sbjct: 106 ------EPNAEPEIDPVKKQEEALLK-----QIEEAKRQAE---------ESQRDDCTVL 145
Query: 225 AYQMPLKATERDVYEFFSK---AGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCL 281
++ L A ERD+Y FFSK GK+RDVRLI D+ S +SKG+
Sbjct: 146 VNRIALHANERDMYNFFSKEKGVGKIRDVRLIRDQRSGKSKGIAYV-------------- 191
Query: 282 INSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQL 341
E YT P +VL +A+ALSG
Sbjct: 192 ------------------------EFYT---PESVL---------------LAMALSGTQ 209
Query: 342 LLGQPVMVKPSEAEKNLVQSNT----------SAGGTATGPYGAID--RKLYVGNL---H 386
+GQ +M++ S+AEKN + + + G P +D +++VG L
Sbjct: 210 FMGQTIMIQASQAEKNRAAAASKYKKEQDRFGNLGNPKPQPQKKVDLENQVFVGGLIDVL 269
Query: 387 FNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIV 446
+ E +R F PFG +E ++LP D TG+ KG + + + ++A+ A +NG +I
Sbjct: 270 NQVNEQDIRGWFTPFGDIETIELPKDHITGRNKGHAIITYRKHKYARTAVKEMNG-FDIN 328
Query: 447 GRTLKVSSVTDHVGTQDTAAKSADFD--DDDGGGLALNAQSRALLMQKLDRTGIATSIAG 504
GR LKV +T+ + D+D DD +AQSRALLMQKL R
Sbjct: 329 GRKLKVQIMTEANSKLMNQRGAGDYDLEDDSANQYIHSAQSRALLMQKLSRESNKQDSGQ 388
Query: 505 SLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFD 564
S+ N +AV Q A ++ PS C+LL NMFD
Sbjct: 389 SIMAQNYNNHAAVQQYAQAM----------------------------PSNCVLLNNMFD 420
Query: 565 PA---METDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFEST--EAAASAQR 619
P ++ DP + ++++ VE+ CS++G+V+ ++V+ ++AG +++F + A +Q
Sbjct: 421 PTGVDLKKDPAYFIDVKEQVEDVCSEFGKVEKVWVE-QAAGNCWVKFNKNDIQGAQRSQM 479
Query: 620 AMHMRWFARRLISAIFMKPEDYEAKFK 646
++ R+F RLI+A F+ + K K
Sbjct: 480 TLNQRYFDGRLITANFVPENVFYGKVK 506
>gi|121700823|ref|XP_001268676.1| RNA splicing factor (Pad-1), putative [Aspergillus clavatus NRRL 1]
gi|119396819|gb|EAW07250.1| RNA splicing factor (Pad-1), putative [Aspergillus clavatus NRRL 1]
Length = 566
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/360 (33%), Positives = 173/360 (48%), Gaps = 80/360 (22%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN--TSAGGTATGPYGAIDRK 379
Y+EF SV AI L+GQ LLG P++ + +EAEKN N S+G P+ +
Sbjct: 221 YVEFKSEESVAPAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEASSGHNHAAPF----HR 276
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVGN+HF++TE L+ +FEPFG +E VQL D ETG+ +G+GFVQF A+ A +
Sbjct: 277 LYVGNIHFSITENDLQNVFEPFGELEFVQLQKD-ETGRSRGYGFVQFRDPNQAREALEKM 335
Query: 440 NGKLEIVGRTLKV-------------------------------------------SSVT 456
NG ++ GR ++V +S
Sbjct: 336 NG-FDLAGRAIRVGLGNDKFTPDSSAQRSQGHGANQQNFQGSSFSGQGGRGIQAGGTSSF 394
Query: 457 DHVGTQDT--AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNG 514
D G +D+ A ++ DD D G+ N SR LM+KL RT PA
Sbjct: 395 DRAGGRDSEKGAGASALDDTDVAGVNFNNYSRDALMRKLARTD-----------EPAEPA 443
Query: 515 SAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFD 574
+ Q+ + +P V + PV NMA S C+LL+NMFDP+ E +
Sbjct: 444 ADDKQKLL------RPKTEVKPL--PVNVNMA-------SRCVLLRNMFDPSEEEGEAWI 488
Query: 575 LEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
+++ DV EC KYG V HI +D S G +YL+F+ + +A + ++ R+F R I+A
Sbjct: 489 KDLEDDVRAECEEKYGHVVHIALDPNSQGDIYLKFDRVQGGENAIKGLNGRFFGGRQITA 548
>gi|336468898|gb|EGO57061.1| hypothetical protein NEUTE1DRAFT_66048 [Neurospora tetrasperma FGSC
2508]
gi|350288804|gb|EGZ70029.1| RNA splicing factor Pad-1 [Neurospora tetrasperma FGSC 2509]
Length = 571
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/371 (32%), Positives = 179/371 (48%), Gaps = 80/371 (21%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 379
Y+EF + SV A+ L+GQ LLG PV+V+ +EAEKN + + TS + P+ +
Sbjct: 228 YVEFKNEDSVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIPF----HR 283
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVGN+HF++TE L+ +FEPFG +E VQL D + G+ +G+GFVQF A+ A +
Sbjct: 284 LYVGNIHFSITEQDLQNVFEPFGELEFVQLQKD-DNGRSRGYGFVQFRDAGQAREALEKM 342
Query: 440 NGKLEIVGRTLKV------------------------------------------SSVTD 457
NG ++ GR ++V +S D
Sbjct: 343 NG-FDLAGRPIRVGLGNDKFTPESTANLLQRFQGQNHHQQFQGSAFSGAGGRGPTTSNFD 401
Query: 458 HVGTQDT--AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGS 515
G +D ++ DD D G+ N SR LM+KL RT PA S
Sbjct: 402 RAGARDNEKGTGASALDDTDVAGVNFNNYSRDALMRKLART----------DEPPA---S 448
Query: 516 AVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDL 575
+ ++ I P +PV NMA S C++L NMFDPA E ++
Sbjct: 449 VIPERQILKPKTETKPLPVNV-------NMA-------SRCVVLHNMFDPAEEEGENWIK 494
Query: 576 EIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAI 634
E++ DV EE +KYG V HI +D SAG +YL+F+ + +A + ++ R+F R+I+A
Sbjct: 495 ELEDDVREEAEAKYGHVVHISLDPNSAGDIYLKFDKVQGGENAIKGLNGRYFGGRMITAA 554
Query: 635 FMKPEDYEAKF 645
+ Y + F
Sbjct: 555 PVVDAVYSSLF 565
>gi|326471726|gb|EGD95735.1| RNA splicing factor [Trichophyton tonsurans CBS 112818]
Length = 592
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 169/362 (46%), Gaps = 81/362 (22%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA---GGTATGPYGAIDR 378
Y+EF + SVP+AI L+GQ LLG P++ + +EAEKN N A + P+
Sbjct: 244 YVEFKNEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPDAHSNNNQQSIPF----H 299
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVGN+HF++TE+ L+ +FEPFG ++ VQL + E G+ KG+GFVQF A+ A
Sbjct: 300 RLYVGNIHFSITESDLQNVFEPFGELDFVQLQRE-EAGRSKGYGFVQFRDPNQAREALEK 358
Query: 439 LNGKLEIVGRTLKV--------------------------SSVTDHVG------------ 460
+NG ++ GR ++V S + H G
Sbjct: 359 MNG-FDLAGRPIRVGLGNDKFSHDPAQLMQRLQQQGHNQGSPYSHHGGRGANAGGSSGGN 417
Query: 461 --------TQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAV 512
A ++ DD D G+ N SR LM+KL RT PA
Sbjct: 418 FDRAGGRDNDKGAGGASALDDTDVAGVNFNNYSRDALMRKLARTD-----------EPAA 466
Query: 513 NGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPD 572
+ ++ P A PV NMA S C+LL+NMFDPA E
Sbjct: 467 EPAPDEKRKA-------PKARTEAKPLPVTVNMA-------SRCVLLRNMFDPAQEEGES 512
Query: 573 FDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLI 631
+ E++ DV EC KYG V HI +D + G +YL+F+ + +A + ++ R+F R I
Sbjct: 513 WVKELEDDVRAECEEKYGHVVHISLDPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQI 572
Query: 632 SA 633
SA
Sbjct: 573 SA 574
>gi|18376336|emb|CAD21082.1| RNA splicing factor Pad-1 [Neurospora crassa]
Length = 571
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/371 (32%), Positives = 179/371 (48%), Gaps = 80/371 (21%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 379
Y+EF + SV A+ L+GQ LLG PV+V+ +EAEKN + + TS + P+ +
Sbjct: 228 YVEFKNEDSVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIPF----HR 283
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVGN+HF++TE L+ +FEPFG +E VQL D + G+ +G+GFVQF A+ A +
Sbjct: 284 LYVGNIHFSITEQDLQNVFEPFGELEFVQLQKD-DNGRSRGYGFVQFRDAGQAREALEKM 342
Query: 440 NGKLEIVGRTLKV------------------------------------------SSVTD 457
NG ++ GR ++V +S D
Sbjct: 343 NG-FDLAGRPIRVGLGNDKFTPESTANLLQRFQGQNHHQQFQGSAFSGAGGRGPATSNFD 401
Query: 458 HVGTQDT--AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGS 515
G +D ++ DD D G+ N SR LM+KL RT PA S
Sbjct: 402 RAGARDNEKGTGASALDDTDVAGVNFNNYSRDALMRKLART----------DEPPA---S 448
Query: 516 AVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDL 575
+ ++ I P +PV NMA S C++L NMFDPA E ++
Sbjct: 449 VIPERQILKPKTETKPLPVNV-------NMA-------SRCVVLHNMFDPAEEEGENWIK 494
Query: 576 EIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAI 634
E++ DV EE +KYG V HI +D SAG +YL+F+ + +A + ++ R+F R+I+A
Sbjct: 495 ELEDDVREEAEAKYGHVVHISLDPNSAGDIYLKFDKVQGGENAIKGLNGRYFGGRMITAA 554
Query: 635 FMKPEDYEAKF 645
+ Y + F
Sbjct: 555 PVVDAVYSSLF 565
>gi|389644626|ref|XP_003719945.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
gi|351639714|gb|EHA47578.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
Length = 564
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 175/346 (50%), Gaps = 29/346 (8%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATG-PYGAIDRKL 380
Y+EF SV A+ L+GQ LLG PV+V+P+EAEKN S G T P+ +L
Sbjct: 220 YVEFKTEESVAAALQLTGQKLLGIPVIVQPTEAEKNRAVKTESTGTQQTSVPF----HRL 275
Query: 381 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 440
YVGN+HF++TE L+ +FEPFG +E VQL D ++G+ +G+GFVQF A+ A +N
Sbjct: 276 YVGNIHFSITEQDLQNVFEPFGELEFVQLQKD-DSGRSRGYGFVQFRDATQAREALEKMN 334
Query: 441 GKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG----GGLALNAQSRALLMQK---L 493
G ++ GR ++V D + TA F +G G A + +
Sbjct: 335 G-FDLAGRPIRVGLGNDKFTPESTANLLRGFQGPNGQQQYQGSAFSGSGGRGAAGQPSNF 393
Query: 494 DRTGIATSIAGSLGVA------PAVNGSAVNQQAI--SLPVVGQPAVPVP--AVTAP--- 540
DR G + GS A VN + ++ A+ L +P+ P + P
Sbjct: 394 DRAGGRDNDKGSGASALDDTDVAGVNFNNFSRDALMRKLARTDEPSTTQPERQILKPRTE 453
Query: 541 VIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKR 599
V P + + S C++L NMFDPA E D+ E++ DV +E KYG V HI +D
Sbjct: 454 VKP-LPINNVNQASRCVVLHNMFDPAEEEGDDWVKELEEDVRQEAEEKYGHVVHISLDPN 512
Query: 600 SAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
S G +YL+F+ + +A + ++ R+F R+I+A + Y + F
Sbjct: 513 SQGDIYLKFDRVQGGENAIKGLNGRYFGGRMITAAPVVDAFYSSLF 558
>gi|302915553|ref|XP_003051587.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
gi|256732526|gb|EEU45874.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
Length = 564
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 135/460 (29%), Positives = 198/460 (43%), Gaps = 130/460 (28%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNT 276
ERD+RTVF Q+ + R++ EFF K G V + +++ DR S+RSKGVG
Sbjct: 174 ERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRISQRSKGVG----------- 222
Query: 277 LHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIA 336
++F V L G + ++ +P+ +
Sbjct: 223 ----------YVEFKNEESVTQALQLTGQK---------------------LLGIPVIVQ 251
Query: 337 LSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRK 396
+ +EAEKN N A G P +LYVGN+HFN+TE L+
Sbjct: 252 V--------------TEAEKNRQARNPEASGPH--PNSIPFHRLYVGNIHFNVTEQDLQA 295
Query: 397 LFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV---- 452
+FEPFG +E VQL D E G+ +G+GFVQF A+ A +NG ++ GR ++V
Sbjct: 296 VFEPFGELEFVQLQKD-ENGRSRGYGFVQFRDAGQAREALEKMNG-FDLAGRPIRVGLGN 353
Query: 453 ------------------------------------SSVTDHVGTQDT--AAKSADFDDD 474
SS D G +D+ S+ DD
Sbjct: 354 DKFTPESTANMLQRFSGQNQSFQGSAFSGAGGRGPQSSTFDRAGGRDSEKTGGSSALDDT 413
Query: 475 DGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPV 534
D G+ N SR LM+KL RT + NG+ Q V +P +
Sbjct: 414 DVAGVNFNNYSRDALMRKLARTDDTNT-----------NGNDERQ-------VLKPKMET 455
Query: 535 PAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKH 593
+ P+ NMA S C++L NMFDP E D+ E++ DV +E S+YG V H
Sbjct: 456 KPL--PMNVNMA-------SRCVVLHNMFDPEEEEGDDWVKELEDDVRQEAESRYGHVVH 506
Query: 594 IYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
I VD S G +YL+F+ + +A + ++ R+F R+I A
Sbjct: 507 ISVDPNSKGDIYLKFDKVQGGENAIKGLNGRYFGGRMIDA 546
>gi|440470687|gb|ELQ39749.1| RNA-binding protein rsd1 [Magnaporthe oryzae Y34]
Length = 566
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/334 (34%), Positives = 171/334 (51%), Gaps = 29/334 (8%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATG-PYGAIDRKL 380
Y+EF SV A+ L+GQ LLG PV+V+P+EAEKN S G T P+ +L
Sbjct: 220 YVEFKTEESVAAALQLTGQKLLGIPVIVQPTEAEKNRAVKTESTGTQQTSVPF----HRL 275
Query: 381 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 440
YVGN+HF++TE L+ +FEPFG +E VQL D ++G+ +G+GFVQF A+ A +N
Sbjct: 276 YVGNIHFSITEQDLQNVFEPFGELEFVQLQKD-DSGRSRGYGFVQFRDATQAREALEKMN 334
Query: 441 GKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG----GGLALNAQSRALLMQK---L 493
G ++ GR ++V D + TA F +G G A + +
Sbjct: 335 G-FDLAGRPIRVGLGNDKFTPESTANLLRGFQGPNGQQQYQGSAFSGSGGRGAAGQPSNF 393
Query: 494 DRTGIATSIAGSLGVA------PAVNGSAVNQQAI--SLPVVGQPAVPVP--AVTAP--- 540
DR G + GS A VN + ++ A+ L +P+ P + P
Sbjct: 394 DRAGGRDNDKGSGASALDDTDVAGVNFNNFSRDALMRKLARTDEPSTTQPERQILKPRTE 453
Query: 541 VIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKR 599
V P + + S C++L NMFDPA E D+ E++ DV +E KYG V HI +D
Sbjct: 454 VKP-LPINNVNQASRCVVLHNMFDPAEEEGDDWVKELEEDVRQEAEEKYGHVVHISLDPN 512
Query: 600 SAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
S G +YL+F+ + +A + ++ R+F R+I+A
Sbjct: 513 SQGDIYLKFDRVQGGENAIKGLNGRYFGGRMITA 546
>gi|85076094|ref|XP_955878.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
gi|28916904|gb|EAA26642.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
Length = 576
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/359 (32%), Positives = 175/359 (48%), Gaps = 80/359 (22%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 379
Y+EF + SV A+ L+GQ LLG PV+V+ +EAEKN + + TS + P+ +
Sbjct: 228 YVEFKNEDSVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIPF----HR 283
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVGN+HF++TE L+ +FEPFG +E VQL D + G+ +G+GFVQF A+ A +
Sbjct: 284 LYVGNIHFSITEQDLQNVFEPFGELEFVQLQKD-DNGRSRGYGFVQFRDAGQAREALEKM 342
Query: 440 NGKLEIVGRTLKV------------------------------------------SSVTD 457
NG ++ GR ++V +S D
Sbjct: 343 NG-FDLAGRPIRVGLGNDKFTPESTANLLQRFQGQNHHQQFQGSAFSGAGGRGPATSNFD 401
Query: 458 HVGTQDT--AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGS 515
G +D ++ DD D G+ N SR LM+KL RT PA S
Sbjct: 402 RAGARDNEKGTGASALDDTDVAGVNFNNYSRDALMRKLART----------DEPPA---S 448
Query: 516 AVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDL 575
+ ++ I P +PV NMA S C++L NMFDPA E ++
Sbjct: 449 VIPERQILKPKTETKPLPVNV-------NMA-------SRCVVLHNMFDPAEEEGENWIK 494
Query: 576 EIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
E++ DV EE +KYG V HI +D SAG +YL+F+ + +A + ++ R+F R+I+A
Sbjct: 495 ELEDDVREEAEAKYGHVVHISLDPNSAGDIYLKFDKVQGGENAIKGLNGRYFGGRMITA 553
>gi|346327401|gb|EGX96997.1| RNA splicing factor (Pad-1), putative [Cordyceps militaris CM01]
Length = 545
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 168/356 (47%), Gaps = 76/356 (21%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF + SV A+ L+GQ LLG PV+V+ +EAEKN T GG+ P +LY
Sbjct: 204 YVEFKNEDSVAPALQLTGQKLLGIPVIVQVTEAEKNRQARTTEPGGSH--PNHVPFHRLY 261
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VGN+HFN+TE L+ +F+PFG +E VQL D ET + +G+GFVQF A+ A +NG
Sbjct: 262 VGNIHFNVTEQDLQAVFDPFGELEFVQLQKD-ETNRSRGYGFVQFRDAGQAREALEKMNG 320
Query: 442 KLEIVGRTLKVSSVTDHVGTQDTA------------------------------------ 465
++ GR ++V D + TA
Sbjct: 321 -FDLAGRPIRVGLGNDKFTPESTANMLQRFSGQNASNQQGSSFSGSGGRGGQNSNFDRAG 379
Query: 466 -------AKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVN 518
++ DD D GG+ N SR LM+KL RT N
Sbjct: 380 ARDSEKTGGASALDDTDVGGVNFNNYSRDALMRKLART------------------DESN 421
Query: 519 QQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQ 578
+ + PV+ +P T P+ N + + S C++L NMF+P E D+ E++
Sbjct: 422 KGSDERPVL-KPRTE----TKPLPMN-----VNTASRCVVLHNMFEPDEEEGDDWVKELE 471
Query: 579 GDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
DV +E KYG V HI VD S G +YL+F+ + +A R ++ R+F R+I A
Sbjct: 472 DDVRQEAEEKYGHVVHISVDPNSKGDIYLKFDKVQGGENAIRGLNGRYFGGRMIDA 527
>gi|444729178|gb|ELW69605.1| RNA-binding protein 39 [Tupaia chinensis]
Length = 467
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 139/449 (30%), Positives = 195/449 (43%), Gaps = 136/449 (30%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V
Sbjct: 193 SKGIA---------------------YVEFVDVSSV------------------------ 207
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKL 380
P+AI L+GQ +LG P++V+ S+ E
Sbjct: 208 -----------PLAIGLTGQRVLGVPIIVQASQIES------------------------ 232
Query: 381 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 440
+QL +D ETG+ KG+GF+ F+ E AK A LN
Sbjct: 233 --------------------------IQLMMDSETGRSKGYGFITFSDSECAKKALEQLN 266
Query: 441 GKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DRTG 497
G E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L + TG
Sbjct: 267 G-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTG 322
Query: 498 IATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECL 557
L + PA + +++ V A+ A P+ ++C
Sbjct: 323 --------LQIPPAAQQALQMSGSLAFGAVAASALAAAASVQPLA-----------TQCF 363
Query: 558 LLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAAS 616
L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S AA +
Sbjct: 364 QLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIA 423
Query: 617 AQRAMHMRWFARRLISAIFMKPEDYEAKF 645
A A+H RWFA ++I+A ++ Y F
Sbjct: 424 AVNALHGRWFAGKMITAAYVPLPTYHNLF 452
>gi|348674007|gb|EGZ13826.1| hypothetical protein PHYSODRAFT_249442 [Phytophthora sojae]
Length = 413
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 142/462 (30%), Positives = 206/462 (44%), Gaps = 103/462 (22%)
Query: 218 RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTL 277
RD RTVF Q+ K E+D+ F SK GKV N +++RD
Sbjct: 5 RDHRTVFVGQLTQKVREKDLERFLSKTGKVE-----------------NVLLIRD----- 42
Query: 278 HSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIAL 337
KF ++ + Y+E ++ VP + L
Sbjct: 43 -----------KFTNRSK-----------------------GFAYVELSNLEDVPKVLLL 68
Query: 338 SGQLLLGQ--PVMVKPSEAEKNLVQSNTSAGGTA--TGPYGA-----------IDRKLYV 382
+GQ+ Q P+M+K SEAEKN S A T P A ++Y
Sbjct: 69 NGQVPDFQVFPIMIKASEAEKNFAAKKDSVMNAAASTAPLTADAPGMSASALSAASRIYC 128
Query: 383 GNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGK 442
GNLH N+TE LR +F+ FG V V + D E G+ KGF F+QF+ + A A S NG
Sbjct: 129 GNLHTNITEDDLRIVFQSFGEVLSVTINRD-EMGRSKGFSFIQFSSPQEANFALSKGNG- 186
Query: 443 LEIVGRTLKVSSVTDHV---------------GTQDTAAKSADFDDDDGGGLALNAQSRA 487
LE+ G L++ V ++ + +DD+G GL++NAQSR+
Sbjct: 187 LELAGNYLRLGPVNENAMNGGNRGMAGAGGSGADNGASGGRWKLEDDEGTGLSMNAQSRS 246
Query: 488 LLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAA 547
LM KL G ++ + A A N A + + A + + T
Sbjct: 247 ALMAKL--AGNDVNLFPTRYPAAASTTDYTNTMAATAAQRAEQAAALMSST--------- 295
Query: 548 EFIGSPSECLLLKNMFDPAME---TDPDFDLEIQGDVEEECSKYGRVKHIYV-DKRSAGF 603
E GS S C ++KNMFD E +P++ +EIQ DVEEEC +YG V H YV +++ G
Sbjct: 296 EIEGSESFCFVVKNMFDVYQEQKSGNPEWAVEIQQDVEEECGQYGPVLHTYVENEKQGGL 355
Query: 604 VYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
VY+ F + AA SA + +H RWF +R IS ++ ++Y F
Sbjct: 356 VYVLFANVSAAVSAAKKLHGRWFNKRQISVRYLSSQEYVGMF 397
>gi|358399615|gb|EHK48952.1| hypothetical protein TRIATDRAFT_164478, partial [Trichoderma
atroviride IMI 206040]
Length = 571
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 118/356 (33%), Positives = 168/356 (47%), Gaps = 75/356 (21%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF +V A+ L+GQ LLG PV+V+ +EAEKN N + T+ P +LY
Sbjct: 229 YVEFKSEDAVQQALQLTGQKLLGIPVIVQHTEAEKNRQARNPDS--TSGHPNSIPFHRLY 286
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VGN+HFN+TE L+ +FEPFG +E VQL D + G+ +G+GFVQF A+ A +NG
Sbjct: 287 VGNIHFNVTEQDLQAVFEPFGELEFVQLQKD-DNGRSRGYGFVQFRDAGQAREALEKMNG 345
Query: 442 KLEIVGRTLKVS----------------------------------------SVTDHVGT 461
++ GR ++V S D G
Sbjct: 346 -FDLAGRPIRVGLGNDKFTPESTANLMHKFSGNNQGGFQGSAFSGAGGRGQQSTFDRAGG 404
Query: 462 QD---TAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVN 518
+D T SA DD D G+ N SR LM+KL RT A + NG+
Sbjct: 405 RDSEKTGGASA-LDDTDVAGVNFNNYSRDALMRKLARTDEAPT-----------NGNEER 452
Query: 519 QQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQ 578
QQ + +P PV NMA S C++L NMFD E D+ E++
Sbjct: 453 QQILKPKTETKP--------LPVNVNMA-------SRCVVLHNMFDATEEEGDDWVKELE 497
Query: 579 GDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
+V +E +YG V HI VD S G +YL+F+ + +A + ++ R+F R+I A
Sbjct: 498 DEVRQEAEQRYGHVVHISVDPNSKGDIYLKFDKVQGGENAIKGLNGRYFGGRMIDA 553
>gi|323507689|emb|CBQ67560.1| related to RNA-binding region containing protein 2 [Sporisorium
reilianum SRZ2]
Length = 659
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/391 (30%), Positives = 177/391 (45%), Gaps = 102/391 (26%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGG-TATGPYGAI-- 376
Y+EF VP AI L+G +L G P++V+ ++A N + Q + AG + P+ A+
Sbjct: 303 YVEFAARELVPKAIELTGTILFGIPIVVQRTDAAHNGGVYQGSGDAGARHGSAPHPAVAA 362
Query: 377 ---------------------------------------------DRKLYVGNLHFNMTE 391
+ +LYVG+LHF++T+
Sbjct: 363 PQLDPRVLANAPLPMQYHTAGAPIHLGAAPQAPRAPRPGPNMPNTEARLYVGSLHFSLTD 422
Query: 392 TQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLK 451
++ +FEPFG +E V L + TG+ KGF F+QF E AK A +NG + R ++
Sbjct: 423 ENVKAVFEPFGEIEYVDLHREPGTGKSKGFCFIQFKYPEDAKKALEQMNG-FVLAERAIR 481
Query: 452 VSSVT----------------DHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDR 495
V +V D G ++ F DDGGG LN + RA LM+KL R
Sbjct: 482 VGNVNAKGSGGGSSYSSGSGQDSQGDGHLPQLTSAF--DDGGGAGLNPERRAALMEKLAR 539
Query: 496 TGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSE 555
P+ + S V A P IP S S
Sbjct: 540 NN-----------EPSASASEVTTVAQERPA--------------GIPE-------STST 567
Query: 556 CLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAA 614
LLLKNMF+PA ET+PD+D ++ DV+EEC +KYGRV I+V+K SAG +Y+ F +A+
Sbjct: 568 SLLLKNMFNPAEETEPDWDTDLAEDVKEECQAKYGRVTSIHVEKESAGEIYVTFADLDAS 627
Query: 615 ASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
A ++ R+F + ISA ++ +AK
Sbjct: 628 RKALDGLNGRFFGGKPISAQYIPDAFVQAKL 658
>gi|320593519|gb|EFX05928.1| RNA splicing factor [Grosmannia clavigera kw1407]
Length = 610
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 182/373 (48%), Gaps = 71/373 (19%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN-LVQSNTSA--GGTATG-PYGAID 377
Y+EF SV A+ L+GQ LLG PV+V+ +EAEKN V+S A G +TG P+
Sbjct: 254 YVEFRSEESVTAALQLTGQKLLGIPVIVQMTEAEKNRQVRSTAEATSNGNSTGVPF---- 309
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 437
+LYVGN+HF++TE+ LR +FEPFG +E VQL D +TG+ +G+GFVQF + A+ A
Sbjct: 310 HRLYVGNIHFSITESDLRNVFEPFGELEFVQLQKD-DTGRSRGYGFVQFRDSDQAREALE 368
Query: 438 ALNGKLEIVGRTLKVSSVTDHVGTQDTA-------------------------------- 465
+NG ++ GR ++V D + TA
Sbjct: 369 KMNG-FDLAGRPIRVGLGNDKFTPESTANLMKGFQGRDQQQQHQGSAFSGSGGRGQNASN 427
Query: 466 ------------AKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVN 513
+ + DD D G+ N SR LM+KL R +++ G
Sbjct: 428 FDRAGGRDNDKGSGAGALDDTDVAGVNFNNYSRDALMRKLARADDSSAN----GTGGGST 483
Query: 514 GSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDF 573
+A ++Q + A P+ PV NMA S C++L NMFD + E ++
Sbjct: 484 SAAADEQQRPILKPRTEAKPL-----PVNVNMA-------SRCVVLHNMFDTSEEEGEEW 531
Query: 574 DLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLIS 632
E++ DV +E KYG V H+ +D S G +YL+F+ + +A + ++ R+F R+I+
Sbjct: 532 IKELEDDVRQEAEEKYGHVVHVALDPNSIGDIYLKFDKVQGGENAIKGLNGRYFGGRMIT 591
Query: 633 AIFMKPEDYEAKF 645
A + Y + F
Sbjct: 592 AAPVVDAVYSSLF 604
>gi|169767236|ref|XP_001818089.1| RNA-binding protein rsd1 [Aspergillus oryzae RIB40]
gi|238484073|ref|XP_002373275.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|83765944|dbj|BAE56087.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701325|gb|EED57663.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|391870727|gb|EIT79903.1| transcriptional coactivator CAPER [Aspergillus oryzae 3.042]
Length = 568
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 135/493 (27%), Positives = 204/493 (41%), Gaps = 154/493 (31%)
Query: 189 RERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVR 248
RER +L + ERD+RT+F Q+ + +++ FF K G V+
Sbjct: 164 RERTPELN------------------EDERDRRTIFVQQLAARLRTKELIAFFEKVGPVK 205
Query: 249 DVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETY 308
+ +++ DR S RSKGVG +D
Sbjct: 206 EAQIVKDRVSGRSKGVGYVEFKNEDS---------------------------------- 231
Query: 309 TVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN--TSAG 366
+ PA L + + G P++ + +EAEKN N S+G
Sbjct: 232 --VAPAIQLTGQKLL--------------------GIPIIAQLTEAEKNRQARNPDASSG 269
Query: 367 GTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF 426
P+ +LYVGN+HF++TE L+ +FEPFG +E VQL D ETG+ +G+GFVQF
Sbjct: 270 NNHAAPF----HRLYVGNIHFSITENDLQNVFEPFGELEFVQLQKD-ETGRSRGYGFVQF 324
Query: 427 AQLEHAKAAQSALNGKLEIVGRTLKV----------------------------SSVTDH 458
A+ A +NG ++ GR ++V SS + H
Sbjct: 325 RDPNQAREALEKMNG-FDLAGRAIRVGLGNDKFTPDSSAQRLQSQGANQQNFQGSSFSGH 383
Query: 459 VGTQDTAAKSADF-----------------DDDDGGGLALNAQSRALLMQKLDRTGIATS 501
G A +++F DD D G+ N SR LM+KL RT +
Sbjct: 384 GGRGIQAGGTSNFDRAGGRDSEKGAGASALDDTDVAGVNFNNYSRDALMRKLARTDEPSE 443
Query: 502 IAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKN 561
SA ++Q + P +PV NMA S C++L+N
Sbjct: 444 ------------SSADDKQKVLRPKTETKPLPVNV-------NMA-------SRCVMLRN 477
Query: 562 MFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRA 620
MFDP E + E++ DV EC KYG V HI +D S G +YL+F+ + +A +
Sbjct: 478 MFDPGEEEGESWIKELEDDVRAECEEKYGHVVHIALDPNSQGDIYLKFDRVQGGENAIKG 537
Query: 621 MHMRWFARRLISA 633
++ R+F + I+A
Sbjct: 538 LNGRFFGGKQITA 550
>gi|429243189|ref|NP_594422.2| RNA-binding protein Rsd1 (predicted) [Schizosaccharomyces pombe
972h-]
gi|380865416|sp|O13845.2|RSD1_SCHPO RecName: Full=RNA-binding protein rsd1
gi|347834186|emb|CAB10118.2| RNA-binding protein Rsd1 (predicted) [Schizosaccharomyces pombe]
Length = 603
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/330 (34%), Positives = 168/330 (50%), Gaps = 23/330 (6%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF SV AIALSG+ LLG PV+V+ +EAEKN + A R L
Sbjct: 285 YVEFCHEDSVQAAIALSGKRLLGLPVIVQLTEAEKNRKAREAAELARAASAEIPFHR-LC 343
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
V N+HFN+T+ ++ +FEPFG +E V L D + + KGFG++Q+ A+ A +NG
Sbjct: 344 VSNIHFNLTDEDVKAIFEPFGDIEFVHLQRD-DQNRSKGFGYIQYRNPISARNALEKMNG 402
Query: 442 KLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATS 501
++ GR ++V D T+ T++ FD+ L Q R+ Q R G +S
Sbjct: 403 -FDLAGRNMRVCLGNDKFTTETTSSMLKRFDE------TLARQERS---QPSQRNG-GSS 451
Query: 502 IAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSP-----SEC 556
S A S ++ S P+ + A + + N ++ + P S C
Sbjct: 452 TYESQDYREAAPLSPTEEE--SRPITRDELMKKLARSEDISDN--SKLVSEPEPPIRSRC 507
Query: 557 LLLKNMFDPAMETDPDFDLEIQGDVEEECS-KYGRVKHIYVDKRSAGFVYLRFESTEAAA 615
LL+NMF+PA ET P++ E++ DV+EEC KYG+V HI V G ++++FE+ + A
Sbjct: 508 ALLENMFNPAEETSPNWVQELEQDVKEECDEKYGKVVHIAVVPNELGQIFVKFENADFAE 567
Query: 616 SAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
A +H RWF R I A + DY KF
Sbjct: 568 KAITGLHQRWFGGRTIKASILPETDYYFKF 597
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDG 274
ERD+RTVF Q+ + T R++Y+FF +AG VRD +++ D+ S RSKGV +D
Sbjct: 236 ERDRRTVFVSQLANRLTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHEDS 293
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 437
R ++V L +T +L FE GPV Q+ D +G+ KG +V+F + +AA
Sbjct: 240 RTVFVSQLANRLTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHEDSVQAA-I 298
Query: 438 ALNGK 442
AL+GK
Sbjct: 299 ALSGK 303
>gi|452002199|gb|EMD94657.1| hypothetical protein COCHEDRAFT_1092247 [Cochliobolus
heterostrophus C5]
Length = 572
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 121/366 (33%), Positives = 182/366 (49%), Gaps = 65/366 (17%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF D SVP A+ L+GQ L G P++ + +EAEKN + S GGTA G GA +LY
Sbjct: 223 YVEFKDEESVPQALELTGQKLKGVPIIAQLTEAEKNRA-ARPSEGGTAPGANGAPFHRLY 281
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLD-IETGQCKGFGFVQFAQLEHAKAAQSALN 440
VGN+HF++TE L+++FEPFG +E V L D + G+ KG+GFVQF HAK A + +N
Sbjct: 282 VGNIHFSVTEKDLQEIFEPFGELEQVILQRDEMNPGRSKGYGFVQFVDPSHAKNALAEMN 341
Query: 441 GKLEIVGRTLKVSSVTDHVGTQDTA---------AKSAD--------------------F 471
G E+ GR ++V D + TA A+S F
Sbjct: 342 G-FELAGRQIRVGLGNDKFTPESTANLLRTFSQQAQSYQGSAFSGAGGRGAYAGGSGGVF 400
Query: 472 D-----DDDG--GGLALNAQSRA-LLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAIS 523
D DD G G AL+ A + + DR+ + ++A P G+
Sbjct: 401 DRTHSKDDRGVSGASALDDTDVAGVNFKTYDRSKLMDALARRDNPEPTKQGAQ------- 453
Query: 524 LPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAME---TDPDFDLEIQGD 580
PVV +P VPV V P+ S+C+ ++N FDP E ++ +++ +
Sbjct: 454 -PVVSKPRVPV--VDKPMA-----------SKCIKIENAFDPDEEQRNWGDNWVKDLELE 499
Query: 581 VEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPE 639
V+ EC KYG+V HI VD S G ++++F+S A + ++ R F R I A ++ +
Sbjct: 500 VKSECDKKYGKVVHIAVDTNSEGEIFVKFDSVSGGEKALQGLNGRNFNHRTIRASYVVDK 559
Query: 640 DYEAKF 645
Y + +
Sbjct: 560 IYNSLW 565
>gi|330791359|ref|XP_003283761.1| hypothetical protein DICPUDRAFT_74732 [Dictyostelium purpureum]
gi|325086384|gb|EGC39775.1| hypothetical protein DICPUDRAFT_74732 [Dictyostelium purpureum]
Length = 630
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 149/552 (26%), Positives = 244/552 (44%), Gaps = 88/552 (15%)
Query: 130 REKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELR 189
R+K+ R+RD R S+SRSR S S +S++R +E+E + E
Sbjct: 129 RDKDYSRDRD--RESTSRSRHSDS-----ASKNRDSKEKEISNGN-----KPSSVESPSL 176
Query: 190 ERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRD 249
++ +++ PE D E DQRTVF ++ ++D+Y+ FSKAGKV
Sbjct: 177 TSSKETNGKDTSSSLSSSTSTLPEPDEESDQRTVFVSKISQNVVDKDLYDLFSKAGKVLG 236
Query: 250 VRLIMDRNSRRSKGVGN-----------AIMMRD---DGN--TLHSCLINSCCVIKFFLV 293
V+LI+D+ ++++KGVG A+ + DG T+H+ +
Sbjct: 237 VQLIVDKVTKKNKGVGYVEFAEKVMVERAVALSGSYLDGQAITVHAIQPEKKTTKPTGIS 296
Query: 294 AE-----VG------------MVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIA 336
AE VG ++F GD + + + + +I+F S AI+
Sbjct: 297 AEQSRIYVGYIHLSVTEEQIRVIFQPYGDIEFINIHTKPGISKFAFIQFRTQESAKRAIS 356
Query: 337 -LSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTAT--GPYGAIDRKLYVGNLHFNMTETQ 393
L+G L+G+ + + N+V +A GT I Y N +N T +
Sbjct: 357 ELNGYELMGKNLKL-------NMVSQEKNANGTYVQIPQINNIVHHGYAPNQAYNATASA 409
Query: 394 LRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVS 453
+ L Q +GF V L+ Q +++ + +
Sbjct: 410 VAAL-------------------QHQGFP-VNPYYLQQQHPHQQHFQSQIQAHLQQGATN 449
Query: 454 SVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVN 513
+ H ++T S D DD GG+ L A RALL KL + T + APA+
Sbjct: 450 NSNQHTFKENTPLSSLDEDD---GGIPLTAHGRALLTAKLQGKVLPTP-QQQMAKAPAIQ 505
Query: 514 GSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDF 573
QQ P + Q +V P + P +F G S CL+L+NMFDP ET+ D+
Sbjct: 506 QQQQQQQQQQQPNM-QTSVIQPYTSLP-------QF-GFSSTCLILRNMFDPDTETEEDW 556
Query: 574 DLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
D +I + ECS++G+++HIY+DK + G +Y+R+++ E+ A + +H RWF++ I A
Sbjct: 557 DQDITTETHSECSQFGKIQHIYLDKNTKGCIYIRYDNPESPLKAIQKLHGRWFSKNEIIA 616
Query: 634 IFMKPEDYEAKF 645
+ Y+ KF
Sbjct: 617 ELVPEPVYKLKF 628
>gi|171690010|ref|XP_001909937.1| hypothetical protein [Podospora anserina S mat+]
gi|170944960|emb|CAP71071.1| unnamed protein product [Podospora anserina S mat+]
Length = 565
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 118/369 (31%), Positives = 173/369 (46%), Gaps = 78/369 (21%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF + SV A+ L+GQ LLG PV+V+ +EAEKN N A T P +LY
Sbjct: 224 YVEFKNEDSVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRNPDA--TGNHPNSIPFHRLY 281
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VGN+HF++TE L+ +FEPFG +E VQL D +TG+ +G+GFVQF A+ A +NG
Sbjct: 282 VGNIHFSITEQDLQNVFEPFGELEFVQLQKD-DTGRSRGYGFVQFRDATQAREALEKMNG 340
Query: 442 KLEIVGRTLKV----------------------------------------SSVTDHVGT 461
++ GR ++V +S D G
Sbjct: 341 -FDLAGRPIRVGLGNDKFTPESTANLLQRFQGQNQQFQGSSFSGAGGRGPPTSNFDRAGA 399
Query: 462 QDT--AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQ 519
+D ++ DD D G+ N SR LM+KL RT
Sbjct: 400 RDNEKGTGASALDDTDVAGVNFNNYSRDALMRKLART----------------------D 437
Query: 520 QAISLPVVGQPAVPVPAV--TAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEI 577
+ IS P Q A P + P+ NMA S C++L+NMFDPA + D+ E+
Sbjct: 438 EPISAPSDRQVAKPKTEIKPNLPINVNMA-------SRCVVLRNMFDPAEQEGEDWAKEL 490
Query: 578 -QGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFM 636
+ +E KYG V HI +D S G +YL+F+ + +A + ++ R+F R+I+A +
Sbjct: 491 EEEVRQEAEEKYGHVVHISLDPNSPGDIYLKFDKVQGGENAIKGLNGRYFDGRMITAAPV 550
Query: 637 KPEDYEAKF 645
Y + F
Sbjct: 551 VDAVYSSLF 559
>gi|25148310|ref|NP_741301.1| Protein Y55F3AM.3, isoform c [Caenorhabditis elegans]
gi|373220574|emb|CCD74061.1| Protein Y55F3AM.3, isoform c [Caenorhabditis elegans]
Length = 435
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 128/439 (29%), Positives = 196/439 (44%), Gaps = 101/439 (23%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNT 276
ERDQRT+ Q+ RD+ EFFS G VRDVR+I D + RSKG+
Sbjct: 21 ERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGI------------ 68
Query: 277 LHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIA 336
C ++F +D SVP+ +A
Sbjct: 69 ---------CYVEF-----------------------------------WDEESVPLGLA 84
Query: 337 LSGQLLLGQPVMVKPSEAEKNLVQSNTSA---GGTATGPYGAIDRKLYVGNLHFNMTETQ 393
L+GQ L+G P+ ++ + AE+N +++ A G A G G + V NLH + E
Sbjct: 85 LNGQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPT--HVLVENLHPKIDEKM 142
Query: 394 LRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVS 453
+R +FE FG +E + L +D + +GF + F + A+ + LN E+ GR +++S
Sbjct: 143 IRDIFESFGRIEKIDLEVD-SNRENRGFATITFRNADDAQKSCEQLN-NFELAGRCIRLS 200
Query: 454 ----SVTDHVGTQDTAAKSADFDD-DDGGGLALNAQSRALLMQKLDR-TGIATSIAGSLG 507
S V ++ + DD D G +L A R LM KL + TG + S
Sbjct: 201 IKQESQAPAVKKEEASIHQRSLDDVGDRQGFSLGAGGRQQLMAKLAQGTGSGMELTASAQ 260
Query: 508 VAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAM 567
+A G + IP++A ++C LL NMFDP+
Sbjct: 261 MAAQHAGHS------------------------QIPSIA-------TQCFLLSNMFDPSK 289
Query: 568 ETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQRAMHMRWF 626
ET+P +D +I+ DV E+C +G H++VDK S G VY++ S A A A+H RWF
Sbjct: 290 ETEPAWDHDIREDVIEQCLAHGGALHVFVDKGSEQGNVYVKCPSIVIAHQAVSALHGRWF 349
Query: 627 ARRLISAIFMKPEDYEAKF 645
+ ++I+A ++ Y F
Sbjct: 350 SGKVITANYVPVNSYHDLF 368
>gi|398407631|ref|XP_003855281.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
gi|339475165|gb|EGP90257.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
Length = 598
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/378 (30%), Positives = 178/378 (47%), Gaps = 96/378 (25%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF D SV A+ L+GQ L+ P++V+ +EAEKN Q+ TS G T G +LY
Sbjct: 257 YVEFADEESVQKALELTGQKLMNIPIIVQLTEAEKNR-QARTSEG-QPTQSNGIPFHRLY 314
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VGN+HF++ E+ LR +FEPFG +E VQL + +TG+ KG+GFVQFA+ + AK A +NG
Sbjct: 315 VGNIHFSIEESDLRDVFEPFGELEFVQLQKE-DTGRSKGYGFVQFAKSDEAKIALEKMNG 373
Query: 442 KLEIVGRTLKV------------SSVTDHVGTQ--------------------------- 462
E+ GR ++V S++ G+Q
Sbjct: 374 -FEVAGRPIRVGLGSDKFTPETTSALLQRFGSQAHHAQMQGSSFSGAGGRGAHAGGQNNF 432
Query: 463 ---------DTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVN 513
D + S DD D GG+A N SR LM KL RT +
Sbjct: 433 DRSTNAREHDKSGASGALDDTDVGGVAFNNYSRHALMSKLARTDEPQPVV---------- 482
Query: 514 GSAVNQQAISLP---VVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETD 570
+ ++LP VV +P +PS C+L+KN+++ + ET+
Sbjct: 483 -----ETKVALPQRVVVDEP---------------------NPSRCVLIKNVYNHSKETE 516
Query: 571 PDF-DLEIQGDVEEECS-KYGRVKHI-YVDKRSAGFVYLRFESTEAAASAQRAMHMRWFA 627
DL++ D+ EEC KYG V H+ + G VY++F + + A + ++ R+F
Sbjct: 517 ESLADLKV--DMREECDKKYGSVVHLDTASGSTGGEVYVKFAAKDGGIKAVQGLNGRFFG 574
Query: 628 RRLISAIFMKPEDYEAKF 645
R ++A ++ Y +
Sbjct: 575 GRRLTASYVADAFYHTMW 592
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 437
R ++V L + QL+ FE GPV Q+ D +G+ KG G+V+FA E + A
Sbjct: 212 RTVFVQQLAAALRTKQLKAFFEQSGPVVEAQIVKDRVSGRSKGVGYVEFADEESVQKA-- 269
Query: 438 ALNGKLEIVGRTL 450
LE+ G+ L
Sbjct: 270 -----LELTGQKL 277
>gi|116200107|ref|XP_001225865.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
gi|88179488|gb|EAQ86956.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
Length = 586
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/390 (30%), Positives = 182/390 (46%), Gaps = 103/390 (26%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN-LVQSNTSAGGTATGPYGAIDRKL 380
Y+EF SV A+ L+GQ LLG PV+V+P+EAEKN V+++ S+G + P+ +L
Sbjct: 228 YVEFKGEESVAAALQLTGQKLLGIPVIVQPTEAEKNRQVRNSESSGHPNSVPF----HRL 283
Query: 381 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 440
YVGN+HF++TET L+ +FEPFG +E VQL D ++G+ +G+GFVQF A+ A +N
Sbjct: 284 YVGNIHFSITETDLQNVFEPFGELEFVQLQKD-DSGRSRGYGFVQFRDAGQAREALEKMN 342
Query: 441 GKLEIVGRTLKVSSVTDHVGTQDTA---------------------------AKSADF-- 471
G ++ GR ++V D + TA ++++F
Sbjct: 343 G-FDLAGRPIRVGLGNDKFTPESTANLLRGFQGQNQNQQFQGSSFSGAGGRGPQASNFDR 401
Query: 472 ---------------DDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSA 516
DD D G+ N SR LM+KL RT
Sbjct: 402 AGGRDNEKGTGASALDDTDVAGVNFNNYSRDALMRKLART-------------------- 441
Query: 517 VNQQAISLPVVGQP--AVPVPAV-TAPVIPNMAAEFIGSPSECLLLKNMFDPA---METD 570
P GQP + P T P+ N++ S C++L+NMFDPA +
Sbjct: 442 ------DEPTNGQPERQILKPKTETKPLPVNVSMA-----SRCVVLRNMFDPAEYVFYSP 490
Query: 571 P--------------DFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAA 615
P D+ E++ +V +E KYG V HI +D S G +YL+F+
Sbjct: 491 PSEAGSLTSARQVGDDWAKELEDEVRQEAEEKYGHVVHISLDPNSQGDIYLKFDKVSGGE 550
Query: 616 SAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+A + ++ R+F R+I+A + Y + F
Sbjct: 551 NAIKGLNGRYFDGRMITAAPVVDAVYSSLF 580
>gi|301624539|ref|XP_002941556.1| PREDICTED: RNA-binding protein 39 [Xenopus (Silurana) tropicalis]
Length = 420
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/326 (35%), Positives = 159/326 (48%), Gaps = 72/326 (22%)
Query: 204 KEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKG 263
+E + ++ PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 136 REPETILSPE---ERDARTVFCMQLAARIRSRDLEDFFSAVGKVRDVRIISDRNSRRSKG 192
Query: 264 VGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYI 323
+ ++F + V + L G
Sbjct: 193 I---------------------AYVEFCDIQSVPLAIGLTG------------------- 212
Query: 324 EFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLY 381
Q LLG P++V+ S+AEKN SN G GP +LY
Sbjct: 213 ----------------QRLLGVPIIVQVSQAEKNRLAAMSNNLQRGNP-GPM-----RLY 250
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
VG+LHFN+TE LR +FEPFG +E +QL + +TG+ KGFGF+ F E A+ A LNG
Sbjct: 251 VGSLHFNITEDMLRGIFEPFGKIENIQLLKEPDTGRSKGFGFITFTDAECARRALEQLNG 310
Query: 442 KLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIAT 500
E+ GR +KV VTDH+ A D D+ + G+ L A R LM KL + TG+
Sbjct: 311 -FELAGRPMKVGHVTDHL-EGGGEASFLDSDELERTGIDLGATGRLQLMAKLAEGTGLQI 368
Query: 501 SIA--GSLGVAPAVNGSAVNQQAISL 524
+A +L + A+ +A+N +L
Sbjct: 369 PLAAQAALQLGGAIPLTALNPTLTAL 394
>gi|389585114|dbj|GAB67845.1| splicing factor [Plasmodium cynomolgi strain B]
Length = 877
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 116/360 (32%), Positives = 182/360 (50%), Gaps = 69/360 (19%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EFY +V A++ +G +L +P+ ++ S+AEKN ++ +A P I KLY
Sbjct: 546 YVEFYTQEAVVKALSANGYMLKNRPIKIQSSQAEKN--RAAKAAKHQPIDP-NDIPIKLY 602
Query: 382 VGNL---HFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+G L N++E +L++LF PFG + V++ D TG+CKGFGF+QF + A A
Sbjct: 603 IGGLVGPLGNISEQELKQLFNPFGEILEVEIHRDPYTGKCKGFGFIQFFRASEAIEAMGV 662
Query: 439 LNGKLEIVGRTLKVSSVTDH---VGTQDTA---------AKSADFDD------------- 473
LNG +EI GR LKVS D + ++ A AK A ++
Sbjct: 663 LNG-MEIAGRELKVSFAQDSKYILASEKEAKDKLIAQLLAKKAKAEEKVEEPDNEKIDND 721
Query: 474 -DDGGGLALNAQSRALLMQKLDR-----TGIATSIAGSLGVAPAVNGSAVNQQAISLPVV 527
DDGGGL A S+ LMQKL R +GI++ A + N + P+
Sbjct: 722 DDDGGGLIAGAGSKIALMQKLQRDPILDSGISSQFA-----------TGANTIMQTAPL- 769
Query: 528 GQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDP---AMETDPDFDLEIQGDVEEE 584
A P + PN L+L NMF P ++ +DPDF +I DV+EE
Sbjct: 770 ---ATAQPNTLNNITPN------------LVLCNMFSPNDESIGSDPDFFTDIIEDVKEE 814
Query: 585 CSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEA 643
CSKYG V I++D ++ G +Y+++ + + + A + ++ R+F LI+A F+ E +++
Sbjct: 815 CSKYGSVTKIWLDTKNIDGKIYIKYANNDESLKAFQFLNGRYFGGSLINAYFLTTEMWDS 874
>gi|344298613|ref|XP_003420986.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Loxodonta
africana]
Length = 434
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 158/537 (29%), Positives = 224/537 (41%), Gaps = 129/537 (24%)
Query: 38 ERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDR 97
E +Y+K ED ++ +E +K + +N + H RDRDR R R
Sbjct: 15 EAAYKKEEDEQQRKEVKKDSPSNTANNTSSTDNNGSGTSASSSSGETSNHSRDRDRHRQR 74
Query: 98 GRERERETERDRERSRERREKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRR 157
RSRER+ + + R +R E R +R E R RS ++ R
Sbjct: 75 ---------NSLSRSRERQHRHRSRSWDHQRSSE-SRSWDRRREDRVRYRSPPLATGRRY 124
Query: 158 SSSRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPE 217
S+S RE+ R E + + PE E
Sbjct: 125 GHSKSPHFREKSPVR--------------------------------EPVDNLSPE---E 149
Query: 218 RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTL 277
RD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 150 RDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG-------------- 195
Query: 278 HSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIAL 337
I + E+ V +G L
Sbjct: 196 ----------IAYVEFCEIQSVPLAIG--------------------------------L 213
Query: 338 SGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLR 395
+GQ LLG P++V+ S+AEKN +N G+ GP +LYVG+LHFN+TE LR
Sbjct: 214 TGQWLLGVPIIVQASQAEKNRLAAMANNLQKGSG-GPM-----RLYVGSLHFNITEDMLR 267
Query: 396 KLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSV 455
+FEPFG ++ + L D +TG KG+GF+ F+ E A+ A LNG E+ GR ++V
Sbjct: 268 GIFEPFGKIDDILLTKDSDTGHSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVGHA 326
Query: 456 TDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNG 514
T+ G D D + D G +A R LM KL G + + A A
Sbjct: 327 TERPDGGTDITFPDGDRELDLG-----SAGGRLQLMAKLAE-GSGIQLPTTAAAAAAAAA 380
Query: 515 SAVNQQAISLPVVGQPAVPV----PAVTAPVIP--NMAAEFIGSPSECLLLKNMFDP 565
+A A+ L AVP+ PA + P N+A++ + S+CL L ++F P
Sbjct: 381 AAAAAAALQL----NGAVPLGALNPAALTALSPALNLASQAVA--SQCLQLSSLFTP 431
>gi|355715684|gb|AES05403.1| RNA binding motif protein 39 [Mustela putorius furo]
Length = 271
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/319 (36%), Positives = 158/319 (49%), Gaps = 82/319 (25%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 13 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 72
Query: 261 SKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSY 320
SKG+ ++F V+ V + L
Sbjct: 73 SKGI---------------------AYVEFVDVSSVPLAIGL------------------ 93
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 378
+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 94 -----------------TGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM----- 130
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 131 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 190
Query: 439 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DR 495
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L +
Sbjct: 191 LNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEG 246
Query: 496 TGI--------ATSIAGSL 506
TG+ A ++GSL
Sbjct: 247 TGLQIPPAAQQALQMSGSL 265
>gi|82595543|ref|XP_725893.1| splicing factor [Plasmodium yoelii yoelii 17XNL]
gi|23481068|gb|EAA17458.1| putative splicing factor [Plasmodium yoelii yoelii]
Length = 698
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/363 (32%), Positives = 177/363 (48%), Gaps = 72/363 (19%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPY--GAIDRK 379
Y+EFY SV A++++G +L +P+ V+ S+AEKN +A T P I K
Sbjct: 364 YVEFYTQDSVIKALSVNGYMLKNRPIKVQSSQAEKN-----RAAKATKHHPIDPNDIPLK 418
Query: 380 LYVGNLH---FNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQ 436
LY+G L N+TE +L++LF PFG + V++ D TG+ KGFGF+QF + A A
Sbjct: 419 LYIGGLLGPLSNITEQELKQLFNPFGDILDVEIHRDPYTGKSKGFGFIQFHKASEAIEAM 478
Query: 437 SALNGKLEIVGRTLKVSSVTDH------------------------VGTQDTAAKSADFD 472
+ +NG +E+ GR +KVS D G Q + K + D
Sbjct: 479 TVMNG-MEVAGREIKVSYAQDSKYLLASDALKDLNIPNLNQIKAATQGGQKSTNKEEEQD 537
Query: 473 DD-------DGGGLALNAQSRALLMQKLDR-TGIATSIAGSLGVAPAVNGSAVNQQAISL 524
++ DGGGL A S+ LMQKL R T I SI + A N A N SL
Sbjct: 538 NEKIDNDDDDGGGLITGASSKIALMQKLQRDTIIDASIPNTY--ATGTNAMARN----SL 591
Query: 525 PVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDP---AMETDPDFDLEIQGDV 581
V P + PN ++L NMF P ++ +DPDF +I DV
Sbjct: 592 NNVSNP-------LNNITPN------------IVLCNMFSPNDSSIGSDPDFFSDIIEDV 632
Query: 582 EEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPED 640
EECSKYG + I+++ ++ G +Y+++ + + A + ++ R+F LI+A F+
Sbjct: 633 REECSKYGNIIKIWLNSKNIDGKIYIKYTKNDESLKAFQCLNGRYFGGSLINAYFISNAI 692
Query: 641 YEA 643
+E+
Sbjct: 693 WES 695
>gi|344298615|ref|XP_003420987.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Loxodonta
africana]
Length = 450
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 150/452 (33%), Positives = 204/452 (45%), Gaps = 106/452 (23%)
Query: 134 RERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELRERER 193
R+R+R +R S SRSR R R R R + +R E R +R RE R R R
Sbjct: 82 RDRDRHRQRNSLSRSRE----------RQHRHRSRSWDHQRSSE-SRSWDRRREDRVRYR 130
Query: 194 DLEMRESRRY--------KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFS 242
+ RRY +EK V EP PE RD RTVF Q+ + RD+ +FFS
Sbjct: 131 SPPLATGRRYGHSKSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFS 190
Query: 243 KAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFL 302
GKVRDVR+I DRNSRRSKG I + E+ V
Sbjct: 191 AVGKVRDVRIISDRNSRRSKG------------------------IAYVEFCEIQSVPLA 226
Query: 303 LGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQ 360
+G L+GQ LLG P++V+ S+AEKN
Sbjct: 227 IG--------------------------------LTGQWLLGVPIIVQASQAEKNRLAAM 254
Query: 361 SNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKG 420
+N G+ GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG KG
Sbjct: 255 ANNLQKGSG-GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDDILLTKDSDTGHSKG 308
Query: 421 FGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGL 479
+GF+ F+ E A+ A LNG E+ GR ++V T+ G D D + D G
Sbjct: 309 YGFITFSDSECARRALEQLNG-FELAGRPMRVGHATERPDGGTDITFPDGDRELDLG--- 364
Query: 480 ALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPV----P 535
+A R LM KL G + + A A +A A+ L AVP+ P
Sbjct: 365 --SAGGRLQLMAKLAE-GSGIQLPTTAAAAAAAAAAAAAAAALQL----NGAVPLGALNP 417
Query: 536 AVTAPVIP--NMAAEFIGSPSECLLLKNMFDP 565
A + P N+A++ + S+CL L ++F P
Sbjct: 418 AALTALSPALNLASQAVA--SQCLQLSSLFTP 447
>gi|336259709|ref|XP_003344654.1| hypothetical protein SMAC_07222 [Sordaria macrospora k-hell]
Length = 631
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/354 (33%), Positives = 163/354 (46%), Gaps = 76/354 (21%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF V A+ L+GQ LLG PV+V+ +EAEKN T + T P +LY
Sbjct: 230 YVEFKSEEHVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTES--TGHHPNSIPFHRLY 287
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF--------------- 426
VGN+HF++TE L+ +FEPFG +E VQL D + G+ +G+GFVQ
Sbjct: 288 VGNIHFSITEQDLQNVFEPFGELEFVQLQKD-DNGRSRGYGFVQPERPSKKMNGFDLAGR 346
Query: 427 ------------------------AQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQ 462
Q H + SA +G G +S D G +
Sbjct: 347 PIRVGLGNDKFTPESTANLLQRFQGQNHHQQFQGSAFSG----AGGRGPATSNFDRAGAR 402
Query: 463 DT--AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQ 520
D ++ DD D G+ N SR LM+KL RT PA S V +
Sbjct: 403 DNEKGTGASALDDTDVAGVNFNNYSRDALMRKLART----------DEPPA---SVVPDR 449
Query: 521 AISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGD 580
I P +PV NMA S C++L NMFDPA E D+ E++ D
Sbjct: 450 QILKPKTETKPLPVNV-------NMA-------SRCVVLHNMFDPAEEEGEDWIKELEDD 495
Query: 581 VEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
V EE +KYG V HI +D SAG +YL+F+ + +A + ++ R+F R+I+A
Sbjct: 496 VREEAEAKYGHVVHISLDPNSAGDIYLKFDKVQGGENAIKGLNGRYFGGRMITA 549
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 437
R ++V L + +L++ FE GPV Q+ D + + KG G+V+F EH +AA
Sbjct: 185 RTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKSEEHVQAA-- 242
Query: 438 ALNGKLEIVGRTL 450
L++ G+ L
Sbjct: 243 -----LQLTGQKL 250
>gi|395830356|ref|XP_003788297.1| PREDICTED: RNA-binding protein 39 [Otolemur garnettii]
Length = 453
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 149/530 (28%), Positives = 217/530 (40%), Gaps = 143/530 (26%)
Query: 120 KERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELE 179
K + KER+R RD ER+ + +S R ++ L
Sbjct: 48 KRSK-------SKERKRSRDRERKKXXXXXXXXXSGPKFNSAIR----------GKIGLP 90
Query: 180 RERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYE 239
+ R + ++ +E + + PE ERD RTVF Q+ + RD+ E
Sbjct: 91 HSIKLSRRRSRSKSPFR-KDKSPVREPIDNLTPE---ERDARTVFCMQLAARIRPRDLEE 146
Query: 240 FFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMV 299
FFS GKVRDVR+I DRNSRRSKG+ ++F V+ V
Sbjct: 147 FFSTVGKVRDVRMISDRNSRRSKGIA---------------------YVEFVDVSSV--- 182
Query: 300 FFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLV 359
P+AI L+GQ +LG P++V+ S+ E
Sbjct: 183 --------------------------------PLAIGLTGQRVLGVPIIVQASQIES--- 207
Query: 360 QSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCK 419
+QL +D ETG+ K
Sbjct: 208 -----------------------------------------------IQLMMDSETGRSK 220
Query: 420 GFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--G 477
G+GF+ F+ E AK A LNG E+ GR +KV VT+ D ++ S+ D D+
Sbjct: 221 GYGFITFSDSECAKKALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERT 276
Query: 478 GLALNAQSRALLMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPA 536
G+ L R LM +L + TG L + PA + +++ V +
Sbjct: 277 GIDLGTTGRLQLMARLAEGTG--------LQIPPAAQQALQMSGSLAFGAVADLQTRLSQ 328
Query: 537 VTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYV 596
T AA ++C L NMF+P E + +D EI+ DV EEC+K+G V HIYV
Sbjct: 329 QTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV 388
Query: 597 DKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
DK SA G VY++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 389 DKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 438
>gi|392574247|gb|EIW67384.1| hypothetical protein TREMEDRAFT_33681 [Tremella mesenterica DSM
1558]
Length = 619
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 164/594 (27%), Positives = 239/594 (40%), Gaps = 180/594 (30%)
Query: 131 EKERERERDGERR---SSSRSRRSSSQSRRSS---------------SRSRRE------- 165
+ER R +G R S R RR S + R SR RE
Sbjct: 109 HRERYRNGNGHSRGPESEGRDRRESREIRDDRYRSRDRSRESYRSHRSRDLREMTREEKE 168
Query: 166 -------RERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEP------ 212
RE E+ L+ ER +RE R RERD R RR E+ P
Sbjct: 169 AEREKRDREMAEEKREAARLKEERFAQRERRTRERDFSPRR-RRPSPTYEIPRPRDSPPP 227
Query: 213 --EADP--------ERDQRTVFAYQMPLKATERDVYEFFSKA---GKVRDVRLIMDRNSR 259
E DP + + R+VF Q+ + T D+ FF G VRD R++ DR S+
Sbjct: 228 TKEKDPVSELLEEVDSEARSVFVSQISSRMTSSDLGLFFEDKLGRGAVRDARVVTDRGSK 287
Query: 260 RSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVS 319
RSKG+G Y LD A LV+
Sbjct: 288 RSKGIG------------------------------------------YVELD-AVALVN 304
Query: 320 YRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA-------------- 365
A+ALSG +++G P+ V +E+E+N + +A
Sbjct: 305 -------------RALALSGTIVMGMPIQVTLTESERNREGMDLAATIAKLSASKARPQV 351
Query: 366 ----------GGTATGPYGAID---------RKLYVGNLHFNMTETQLRKLFEPFGPVEL 406
G P +D +L+V L +++ ++++F+PFG ++
Sbjct: 352 TYQTRFPPLSNGLYIPPGVDVDANRDASVPYHRLFVSGLAYSLAADDIKQVFDPFGQIDF 411
Query: 407 VQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAA 466
V L D+ TGQ KG +VQF L+ A+ A A+NG EI GR ++V ++ + +T
Sbjct: 412 VDLHHDV-TGQSKGTAYVQFHDLKSAQTALDAMNG-FEIAGRPIRVQTIQERAHISETL- 468
Query: 467 KSADFDDDDGG---GLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAIS 523
+D G G ++ +R LMQKL R GS +P + S I
Sbjct: 469 -------EDAGYSQGRKMDNSTRMSLMQKLAR----NDGPGSAHNSP-LQFSCHKMHIID 516
Query: 524 LPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEE 583
P P P +L+ NMF+P ET+ ++DL++ DV+
Sbjct: 517 NSTNNAPVAPTP--------------------FILVNNMFNPEEETERNWDLDLAEDVKG 556
Query: 584 EC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFM 636
E SKYGRVK I VDK SAG VY+ FE T A+ A + +H R+F R + A ++
Sbjct: 557 EIESKYGRVKRIKVDKMSAGDVYVEFEGTGASERAVKGLHGRFFGGRSLRAGYI 610
>gi|344298617|ref|XP_003420988.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Loxodonta
africana]
Length = 416
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 145/471 (30%), Positives = 210/471 (44%), Gaps = 100/471 (21%)
Query: 119 EKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELEL 178
+KE + ++R++ +K+ S+ + +S S S S R+R+ R+R L
Sbjct: 19 KKEEDEQQRKEVKKDSPSNTANNTSSTDNNGSGTSASSSSGETSNHSRDRDRHRQRN-SL 77
Query: 179 ERERERERELRERERDLE-MRESRRYKEKKEVVEPEADP--------------ERDQRTV 223
R RER+ R R D + ESR + ++E P ERD RTV
Sbjct: 78 SRSRERQHRHRSRSWDHQRSSESRSWDRRREDRVRYRSPPLATGEPVDNLSPEERDARTV 137
Query: 224 FAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLIN 283
F Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 138 FCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG-------------------- 177
Query: 284 SCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLL 343
I + E+ V +G L+GQ LL
Sbjct: 178 ----IAYVEFCEIQSVPLAIG--------------------------------LTGQWLL 201
Query: 344 GQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPF 401
G P++V+ S+AEKN +N G+ GP +LYVG+LHFN+TE LR +FEPF
Sbjct: 202 GVPIIVQASQAEKNRLAAMANNLQKGSG-GPM-----RLYVGSLHFNITEDMLRGIFEPF 255
Query: 402 GPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHV-G 460
G ++ + L D +TG KG+GF+ F+ E A+ A LNG E+ GR ++V T+ G
Sbjct: 256 GKIDDILLTKDSDTGHSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVGHATERPDG 314
Query: 461 TQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQ 520
D D + D G +A R LM KL G + + A A +A
Sbjct: 315 GTDITFPDGDRELDLG-----SAGGRLQLMAKLAE-GSGIQLPTTAAAAAAAAAAAAAAA 368
Query: 521 AISLPVVGQPAVPV----PAVTAPVIP--NMAAEFIGSPSECLLLKNMFDP 565
A+ L AVP+ PA + P N+A++ + S+CL L ++F P
Sbjct: 369 ALQL----NGAVPLGALNPAALTALSPALNLASQAVA--SQCLQLSSLFTP 413
>gi|221058957|ref|XP_002260124.1| splicing factor [Plasmodium knowlesi strain H]
gi|193810197|emb|CAQ41391.1| splicing factor, putative [Plasmodium knowlesi strain H]
Length = 970
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 113/356 (31%), Positives = 173/356 (48%), Gaps = 61/356 (17%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EFY +V A++ +G +L +P+ ++ S+AEKN ++ +A P I KLY
Sbjct: 639 YVEFYTQEAVVKALSANGYMLKNRPIKIQSSQAEKN--RAAKAAKHQPIDP-NDIPIKLY 695
Query: 382 VGNL---HFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+G L N++E +L++LF PFG + V++ D TG+CKGFGF+QF + A A
Sbjct: 696 IGGLVGPLGNISEQELKQLFNPFGEILEVEIHRDPYTGKCKGFGFIQFFRASEAIEAMGV 755
Query: 439 LNGKLEIVGRTLKVSSVTD--HVGTQDTAAKSA--------------DFDDDDG------ 476
LNG +EI GR LKVS D ++ + AK ++ D
Sbjct: 756 LNG-MEIAGRELKVSFAQDSKYILASEKEAKEKVLAKLMAKKAKAEEKVEEPDNEKIDND 814
Query: 477 ----GGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPA-VNGSAVNQQAISLPVVGQPA 531
GGL A S+ LMQKL R I S G++ G+ Q SL
Sbjct: 815 DDDGGGLIAGAGSKIALMQKLQRDTILDS-----GISSQFTTGANAIMQTTSLGAAQSNT 869
Query: 532 VPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAME---TDPDFDLEIQGDVEEECSKY 588
+ + PN L+L NMF P E +DPDF +I DV+EECSKY
Sbjct: 870 LN------NITPN------------LVLCNMFSPNDENIGSDPDFFSDIIEDVKEECSKY 911
Query: 589 GRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEA 643
G + I++D ++ G +Y+++ + A A + ++ R+F LI+A F+ E + +
Sbjct: 912 GSITKIWMDTKNIDGKIYIKYTKQDEAFKAFQFLNGRYFGGSLINAYFVTEEMWNS 967
>gi|68073969|ref|XP_678899.1| splicing factor [Plasmodium berghei strain ANKA]
gi|56499509|emb|CAH94054.1| splicing factor, putative [Plasmodium berghei]
Length = 535
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 176/362 (48%), Gaps = 70/362 (19%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPY--GAIDRK 379
Y+EFY SV A++++G +L +P+ V+ S+AEKN +A T P I K
Sbjct: 201 YVEFYTQESVIKALSVNGYMLKNRPIKVQSSQAEKN-----RAAKATKHHPIDPNDIPLK 255
Query: 380 LYVGNLH---FNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQ 436
LY+G L N+TE +L++LF PFG + V++ D TG+ KGFGF+QF + A A
Sbjct: 256 LYIGGLLGPLSNITEQELKQLFNPFGDILDVEIHRDPYTGKSKGFGFIQFHKASEAIEAM 315
Query: 437 SALNGKLEIVGRTLKVSSVTDH------------------------VGTQDTAAKSADFD 472
+ +NG +E+ GR +KVS D G Q +A K + D
Sbjct: 316 TVMNG-MEVAGREIKVSYAQDSKYLLATDALKDLNIPNLNQIKAAAQGVQKSANKEEEQD 374
Query: 473 DD-------DGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLP 525
++ DGGGL A S+ LMQKL R I A N A+ AI+
Sbjct: 375 NEKIDNDDDDGGGLITGASSKIALMQKLQRDTIID--------ASIPNTYAIGTNAIARN 426
Query: 526 VVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDP---AMETDPDFDLEIQGDVE 582
+ + P+ VT+ ++ L NMF P + +DPDF +I DV
Sbjct: 427 SLNNVSSPLNNVTSNIV----------------LCNMFSPNDSNIGSDPDFFSDIIEDVR 470
Query: 583 EECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDY 641
EECSKYG + I+++ ++ G +Y+++ + + A + ++ R+F LI+A F+ +
Sbjct: 471 EECSKYGNIIKIWLNTKNIDGKIYIKYTKNDESLKAFQCLNGRYFGGSLINAYFISNATW 530
Query: 642 EA 643
E+
Sbjct: 531 ES 532
>gi|328848768|gb|EGF97966.1| hypothetical protein MELLADRAFT_84111 [Melampsora larici-populina
98AG31]
Length = 695
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 147/517 (28%), Positives = 220/517 (42%), Gaps = 125/517 (24%)
Query: 183 ERER-------ELRERERDLEMR----------------------ESRRYKEKKEVVEPE 213
ERER ++R RD R ++ RY+ ++ P
Sbjct: 230 ERERYRKRHRSRSKDRSRDRSHRPDDPIDDREIERRRRYEEAEGEDNPRYRPYEQTASPT 289
Query: 214 A---------DPERDQRTVFAYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKG 263
A + E + R+VF Q+ + +R++ +FF +AGKVRD R+I DR SRRSKG
Sbjct: 290 ARRSSSPHLTEEEHEMRSVFVSQLSARVGDRELSQFFEQQAGKVRDARVITDRISRRSKG 349
Query: 264 VGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYI 323
VG ++F + V L G T L V+V Y
Sbjct: 350 VG---------------------YVEFRELDSVQKALALTG----TKLLGLPVMVQYTEA 384
Query: 324 EFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVG 383
E MA + G V V P+ + + G P +LYVG
Sbjct: 385 EKNRQA---MANTQPNNVAAGL-VTVPPAPPVQRSYVAPKPRGPGPNDPNSYA--RLYVG 438
Query: 384 NLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGF-------VQFAQLEHAKAAQ 436
+L+FN+T+ LR++F+PFG +E V L D TG+ KG+ F ++F + AK A
Sbjct: 439 SLNFNLTDDDLRQVFQPFGDIEYVDLHRDQITGKSKGYAFTLLTCVNIRFKNMHDAKNAM 498
Query: 437 SALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRT 496
+NG ++ GR L+V + Q AA LNA + ++
Sbjct: 499 EKMNG-FQLAGRALRVE-----IKAQPPAA-------------LLNATAPGVI-----NP 534
Query: 497 GIATSIAGSLGVAPAVN---------GSAVNQQA-----ISLPVVGQPA-VPVPAVTAPV 541
I T G+ + + + GS +NQ + L QP VPV + P
Sbjct: 535 VIVTPTGGNFAMTNSNSFEERLEEPVGSGMNQISRVELMHKLARTEQPTNVPVTDMFRPN 594
Query: 542 IPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRS 600
IP S +LLKNMF+P ET+ +D+E++ DV+ EC KYG V I ++K S
Sbjct: 595 IPTAT-------SRSVLLKNMFNPEEETERGWDMELRDDVKGECEEKYGPVLAIAIEKES 647
Query: 601 -AGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFM 636
G +Y+ F+S +A A ++ RWF R I+A F+
Sbjct: 648 MGGEIYITFDSVASAQKAIAGLNNRWFGGRQITAAFI 684
>gi|116734696|ref|NP_001070819.1| probable RNA-binding protein 23 isoform 1 [Homo sapiens]
gi|34925229|sp|Q86U06.1|RBM23_HUMAN RecName: Full=Probable RNA-binding protein 23; AltName:
Full=RNA-binding motif protein 23; AltName:
Full=RNA-binding region-containing protein 4; AltName:
Full=Splicing factor SF2
gi|28071058|emb|CAD61910.1| unnamed protein product [Homo sapiens]
gi|119586629|gb|EAW66225.1| RNA binding motif protein 23, isoform CRA_d [Homo sapiens]
Length = 439
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 186/420 (44%), Gaps = 94/420 (22%)
Query: 161 RSRRERERESERERELELERERERERELRERERDLEMRESRRY--------KEKKEVVEP 212
R R R R +R E R R+ RE R R + RY +EK V EP
Sbjct: 96 RQCRHRSRSWDRRHGSE-SRSRDHRREDRVHYRSPPLATGYRYGHSKSPHFREKSPVREP 154
Query: 213 --EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIM 269
PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 155 VDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG------ 208
Query: 270 MRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVM 329
I + E+ V +G
Sbjct: 209 ------------------IAYVEFCEIQSVPLAIG------------------------- 225
Query: 330 SVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHF 387
L+GQ LLG P++V+ S+AEKN +N G GP +LYVG+LHF
Sbjct: 226 -------LTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVGSLHF 272
Query: 388 NMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVG 447
N+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG E+ G
Sbjct: 273 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAG 331
Query: 448 RTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIAGS 505
R ++V VT+ + G D D + D G +A R LM KL + GI
Sbjct: 332 RPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQLMAKLAEGAGIQL----- 381
Query: 506 LGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDP 565
P+ +A A + + AVP+ A+ + ++ + S+C L ++F P
Sbjct: 382 ----PSTAAAAAAAAAQAAALQLNGAVPLGALNPAALTALSPA-LNLASQCFQLSSLFTP 436
>gi|148231281|ref|NP_001085808.1| RNA binding motif protein 23 [Xenopus laevis]
gi|49118375|gb|AAH73374.1| MGC80803 protein [Xenopus laevis]
Length = 416
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/313 (34%), Positives = 155/313 (49%), Gaps = 72/313 (23%)
Query: 204 KEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKG 263
+E + ++ PE ERD RTVF Q+ + RD+ +FFS GKVRDV++I DRNSRRSKG
Sbjct: 139 REPEAILSPE---ERDARTVFCMQLAARIRSRDLEDFFSAVGKVRDVKIISDRNSRRSKG 195
Query: 264 VGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYI 323
+ ++F + V + L G
Sbjct: 196 I---------------------AYVEFCEIHSVPLAIGLTG------------------- 215
Query: 324 EFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVG 383
Q LLG P++V+ S+AEKN + + ++ G +G + +LYVG
Sbjct: 216 ----------------QRLLGVPIIVQASQAEKNRLAAMSN--NLQRGNFGPM--RLYVG 255
Query: 384 NLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKL 443
+LHFN+TE LR +FEPFG +E +QL + +TG+ KGFGF+ F E A+ A LNG
Sbjct: 256 SLHFNITEEMLRGIFEPFGKIENIQLLKEPDTGRSKGFGFITFTDAECARRALEQLNG-F 314
Query: 444 EIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDR-TGIATSI 502
E+ G+ +KV VT G D A D D+ + G+ L A R LM KL + TG+ +
Sbjct: 315 ELAGKPMKVGHVT---GGGD--ASFLDSDELERNGIGLGATGRLQLMAKLAQGTGLQIPL 369
Query: 503 AGSLGVAPAVNGS 515
A A +NG+
Sbjct: 370 AAQ--AALQLNGA 380
>gi|225677677|gb|EEH15961.1| RNA-binding protein rsd1 [Paracoccidioides brasiliensis Pb03]
Length = 600
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 151/542 (27%), Positives = 223/542 (41%), Gaps = 142/542 (26%)
Query: 149 RRSSSQSRRSSSRSRRERERESEREREL-ELERERERERE-----LRERERDLEMRESRR 202
R S R R+ R R R +R R R ER+ R S
Sbjct: 126 RSSGGDYYRGGGRTTRSRSRSPFDDRYYRPTGRPRHDERDDDKRTSRRDRDGRRRSPSGG 185
Query: 203 YKEKKEVVEPE-ADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRS 261
+ EP+ + ERD+RTVF Q+ + +++ FF K G V++ +++ DR S RS
Sbjct: 186 RGRRSRTPEPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRS 245
Query: 262 KGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYR 321
KGVG ++F V + L G +
Sbjct: 246 KGVG---------------------YVEFKDEESVPLAIQLTGQK--------------- 269
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID-RKL 380
++ +P+ L +EAEKN N A +G +I +L
Sbjct: 270 ------LLGIPIIAQL--------------TEAEKNRQARNPEA--NVSGNQNSIPFHRL 307
Query: 381 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 440
YVGN+HF++TE+ L+K+FEPFG ++ VQL + E G+ +G+GFVQF A+ A +N
Sbjct: 308 YVGNIHFSITESDLQKVFEPFGELDFVQLQKE-EGGRSRGYGFVQFRDPNQAREALEKMN 366
Query: 441 GKLEIVGRTLKV------------------------------SSVTDHVGTQDTAAKSAD 470
G ++ GR ++V S + H G A S +
Sbjct: 367 G-FDLAGRPIRVGLGNDKFTPESTANLLQRFQGQGAHHNFQGSLFSGHGGRGAQAGGSGN 425
Query: 471 F------------------DDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAV 512
F DD D G+ N SR LM+KL RT PAV
Sbjct: 426 FDRAGGRDNDKAAGGASALDDTDVAGVNFNNYSRDALMRKLARTD-----------EPAV 474
Query: 513 NGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPD 572
++ + P + A P+ PV NMA S C+LL+NMFDPA E
Sbjct: 475 EPKPDEKRKVPKPQLN--AKPL-----PVTVNMA-------SRCVLLRNMFDPAEEEGDG 520
Query: 573 FDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLI 631
+ E++ DV EC KYG V HI +D + G +YL+F+ + +A + ++ R+F R I
Sbjct: 521 WIKELEDDVRAECEEKYGHVVHIALDPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQI 580
Query: 632 SA 633
SA
Sbjct: 581 SA 582
>gi|226295167|gb|EEH50587.1| RNA splicing factor Pad-1 [Paracoccidioides brasiliensis Pb18]
Length = 600
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 150/542 (27%), Positives = 221/542 (40%), Gaps = 142/542 (26%)
Query: 149 RRSSSQSRRSSSRSRRERERESEREREL-ELERERERERE-----LRERERDLEMRESRR 202
R S R R+ R R R +R R R ER+ R S
Sbjct: 126 RSSGGDYYRGGGRTTRSRSRSPFDDRYYRPTGRPRHDERDDDKRTSRRDRDGRRRSPSGG 185
Query: 203 YKEKKEVVEPE-ADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRS 261
+ EP+ + ERD+RTVF Q+ + +++ FF K G V++ +++ DR S RS
Sbjct: 186 RGRRSRTPEPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRS 245
Query: 262 KGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYR 321
KGVG ++F V + L G +
Sbjct: 246 KGVG---------------------YVEFKDEESVPLAIQLTGQK--------------- 269
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID-RKL 380
++ +P+ L +EAEKN N A +G +I +L
Sbjct: 270 ------LLGIPIIAQL--------------TEAEKNRQARNPEA--NVSGNQNSIPFHRL 307
Query: 381 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 440
YVGN+HF++TE+ L+K+FEPFG ++ VQL + E G+ +G+GFVQF A+ A +N
Sbjct: 308 YVGNIHFSITESDLQKVFEPFGELDFVQLQKE-EGGRSRGYGFVQFRDPNQAREALEKMN 366
Query: 441 GKLEIVGRTLKV------------------------------SSVTDHVGTQDTAAKSAD 470
G ++ GR ++V S + H G A S +
Sbjct: 367 G-FDLAGRPIRVGLGNDKFTPESTANLLQRFQGQGAHHNFQGSLFSGHGGRGAQAGGSGN 425
Query: 471 F------------------DDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAV 512
F DD D G+ N SR LM+KL RT PAV
Sbjct: 426 FDRAGGRDNDKAAGGASALDDTDVAGVNFNNYSRDALMRKLARTD-----------EPAV 474
Query: 513 NGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPD 572
++ + P + A PV NMA S C+LL+NMFDPA E
Sbjct: 475 EPKPDEKRKVPKPQLN-------AKPLPVTVNMA-------SRCVLLRNMFDPAEEEGDG 520
Query: 573 FDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLI 631
+ E++ DV EC KYG V HI +D + G +YL+F+ + +A + ++ R+F R I
Sbjct: 521 WIKELEDDVRAECEEKYGHVVHIALDPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQI 580
Query: 632 SA 633
SA
Sbjct: 581 SA 582
>gi|225561416|gb|EEH09696.1| RNA splicing factor Pad-1 [Ajellomyces capsulatus G186AR]
Length = 584
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 171/627 (27%), Positives = 256/627 (40%), Gaps = 145/627 (23%)
Query: 64 RDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDR------GRERERETERDRERSRERRE 117
+ DE NGSR +R +R R G E + + DR +
Sbjct: 28 KSHDESNGSRSERRDRDRDLDRERKRRDRSRERRHERDADGDEEMKSPKSDRASANGSNR 87
Query: 118 KEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELE 177
K R+ R R+R+ D R S R ++ R SRSR + R
Sbjct: 88 SRKRSRSRDSGKRHSRRDRD-DPYRSSGGDYYRGPGRTTR--SRSRSPYDDRYYRPTGRS 144
Query: 178 LERERERERELRERERDLEMRESRRYKEKKEVVEPE-ADPERDQRTVFAYQMPLKATERD 236
ER+ +R +R+RD R + + EP+ + ERD+RTVF Q+ + ++
Sbjct: 145 RRDERDDDRRSSKRDRDGRRRSPSSSRRRSRSPEPQLTEDERDRRTVFVQQLAARLRTKE 204
Query: 237 VYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEV 296
+ FF K G V++ +++ DR S RSKGVG ++F V
Sbjct: 205 LIAFFEKVGPVKEAQIVKDRVSGRSKGVG---------------------YVEFKNEESV 243
Query: 297 GMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEK 356
+ L G + ++ +P+ L +EAEK
Sbjct: 244 PLAIQLTGQK---------------------LLGIPIIAQL--------------TEAEK 268
Query: 357 NLVQSNTSAGGTATGPYGAID-RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIET 415
N N A +G +I +LYVGN+HF++TE+ L+K+FEPFG ++ VQL + E
Sbjct: 269 NRQARNPEA--NVSGNQNSIPFHRLYVGNIHFSITESDLQKVFEPFGELDFVQLQKE-EG 325
Query: 416 GQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV----------------------- 452
G+ +G+GFVQF A+ A +NG ++ GR ++V
Sbjct: 326 GRSRGYGFVQFRDPNQAREALEKMNG-FDLAGRPIRVGLGNDKFTPESTANLLQRFQGQG 384
Query: 453 -------SSVTDHVGTQDTAAKSADF------------------DDDDGGGLALNAQSRA 487
S + H G A S F DD D G+ N SR
Sbjct: 385 AHHNFQGSLFSGHGGRGAQAGGSGHFDRAGGRDNDKAAGGASALDDTDVAGVNFNNYSRD 444
Query: 488 LLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAA 547
LM+KL RT PAV + ++ + P V +PV NMA
Sbjct: 445 ALMRKLARTD-----------EPAVEPTPDEKRKVPKPQVNAKPLPVSV-------NMA- 485
Query: 548 EFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYL 606
S C+LL+NMFDPA E + E++ DV EC KYG V HI +D + G +YL
Sbjct: 486 ------SRCVLLRNMFDPAEEEGESWIKELEDDVRAECEDKYGHVVHIALDPNTQGDIYL 539
Query: 607 RFESTEAAASAQRAMHMRWFARRLISA 633
+F+ + +A + ++ R+F R ISA
Sbjct: 540 KFDRVQGGENAIKGLNGRFFGGRQISA 566
>gi|154282581|ref|XP_001542086.1| hypothetical protein HCAG_02257 [Ajellomyces capsulatus NAm1]
gi|150410266|gb|EDN05654.1| hypothetical protein HCAG_02257 [Ajellomyces capsulatus NAm1]
Length = 585
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 171/627 (27%), Positives = 256/627 (40%), Gaps = 145/627 (23%)
Query: 64 RDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDR------GRERERETERDRERSRERRE 117
+ DE NGSR +R +R R G E + + DR +
Sbjct: 29 KSHDESNGSRSERRDRDRDLDRERKRRDRSRERRHERDADGDEEMKSPKSDRASANGSNR 88
Query: 118 KEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELE 177
K R+ R R+R+ D R S R ++ R SRSR + R
Sbjct: 89 SRKRSRSRDSGKRHSRRDRD-DPYRSSGGDYYRGPGRTTR--SRSRSPYDDRYYRPTGRS 145
Query: 178 LERERERERELRERERDLEMRESRRYKEKKEVVEPE-ADPERDQRTVFAYQMPLKATERD 236
ER+ +R +R+RD R + + EP+ + ERD+RTVF Q+ + ++
Sbjct: 146 RRDERDDDRRSSKRDRDGRRRSPSSSRRRSRSPEPQLTEDERDRRTVFVQQLAARLRTKE 205
Query: 237 VYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEV 296
+ FF K G V++ +++ DR S RSKGVG ++F V
Sbjct: 206 LIAFFEKVGPVKEAQIVKDRVSGRSKGVG---------------------YVEFKNEESV 244
Query: 297 GMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEK 356
+ L G + ++ +P+ L +EAEK
Sbjct: 245 PLAIQLTGQK---------------------LLGIPIIAQL--------------TEAEK 269
Query: 357 NLVQSNTSAGGTATGPYGAID-RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIET 415
N N A +G +I +LYVGN+HF++TE+ L+K+FEPFG ++ VQL + E
Sbjct: 270 NRQARNPEA--NVSGNQNSIPFHRLYVGNIHFSITESDLQKVFEPFGELDFVQLQKE-EG 326
Query: 416 GQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV----------------------- 452
G+ +G+GFVQF A+ A +NG ++ GR ++V
Sbjct: 327 GRSRGYGFVQFRDPNQAREALEKMNG-FDLAGRPIRVGLGNDKFTPESTANLLQRFQGQG 385
Query: 453 -------SSVTDHVGTQDTAAKSADF------------------DDDDGGGLALNAQSRA 487
S + H G A S F DD D G+ N SR
Sbjct: 386 AHHNFQGSLFSGHGGRGAQAGGSGHFDRAGGRDNDKAAGGASALDDTDVAGVNFNNYSRD 445
Query: 488 LLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAA 547
LM+KL RT PAV + ++ + P V +PV NMA
Sbjct: 446 ALMRKLARTD-----------EPAVEPTPDEKRKVPKPQVNAKPLPVSV-------NMA- 486
Query: 548 EFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYL 606
S C+LL+NMFDPA E + E++ DV EC KYG V HI +D + G +YL
Sbjct: 487 ------SRCVLLRNMFDPAEEEGESWIKELEDDVRAECEDKYGHVVHIALDPNTQGDIYL 540
Query: 607 RFESTEAAASAQRAMHMRWFARRLISA 633
+F+ + +A + ++ R+F R ISA
Sbjct: 541 KFDRVQGGENAIKGLNGRFFGGRQISA 567
>gi|325090859|gb|EGC44169.1| RNA splicing factor [Ajellomyces capsulatus H88]
Length = 585
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 176/628 (28%), Positives = 261/628 (41%), Gaps = 147/628 (23%)
Query: 64 RDEDEENG-------SRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERR 116
+ DE NG RD DR+R R R +RD D G E + + DR +
Sbjct: 29 KSHDESNGSRSERRDRDRDLDRERKRRNRSRERRHERDAD-GDEEMKSPKSDRASANGSN 87
Query: 117 EKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESEREREL 176
K R+ R R+R+ D R S R ++ R SRSR + R
Sbjct: 88 RSRKRSRSRDSGKRHSRRDRD-DPYRSSGGDYYRGPGRTTR--SRSRSPYDDRYYRPTGR 144
Query: 177 ELERERERERELRERERDLEMRESRRYKEKKEVVEPE-ADPERDQRTVFAYQMPLKATER 235
ER+ +R +R+RD R + + EP+ + ERD+RTVF Q+ + +
Sbjct: 145 SRRDERDDDRRSSKRDRDGRRRSPSSSRRRSRSPEPQLTEDERDRRTVFVQQLAARLRTK 204
Query: 236 DVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAE 295
++ FF K G V++ +++ DR S RSKGVG ++F
Sbjct: 205 ELIAFFEKVGPVKEAQIVKDRVSGRSKGVG---------------------YVEFKNEES 243
Query: 296 VGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAE 355
V + L G + ++ +P+ L +EAE
Sbjct: 244 VPLAIQLTGQK---------------------LLGIPIIAQL--------------TEAE 268
Query: 356 KNLVQSNTSAGGTATGPYGAID-RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIE 414
KN N A +G +I +LYVGN+HF++TE+ L+K+FEPFG ++ VQL + E
Sbjct: 269 KNRQARNPEA--NVSGNQNSIPFHRLYVGNIHFSITESDLQKVFEPFGELDFVQLQKE-E 325
Query: 415 TGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV---------------------- 452
G+ +G+GFVQF A+ A +NG ++ GR ++V
Sbjct: 326 GGRSRGYGFVQFRDPNQAREALEKMNG-FDLAGRPIRVGLGNDKFTPESTANLLQRFQGQ 384
Query: 453 --------SSVTDHVGTQDTAAKSADF------------------DDDDGGGLALNAQSR 486
S + H G A S F DD D G+ N SR
Sbjct: 385 GAHHNFQGSLFSGHGGRGAQAGGSGHFDRAGGRDNDKAAGGASALDDTDVAGVNFNNYSR 444
Query: 487 ALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMA 546
LM+KL RT PAV + ++ + P V +PV NMA
Sbjct: 445 DALMRKLARTD-----------EPAVEPTPDEKRKVPKPQVNAKPLPVSV-------NMA 486
Query: 547 AEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVY 605
S C+LL+NMFDPA E + E++ DV EC KYG V HI +D + G +Y
Sbjct: 487 -------SRCVLLRNMFDPAEEEGESWIKELEDDVRAECEDKYGHVVHIALDPNTQGDIY 539
Query: 606 LRFESTEAAASAQRAMHMRWFARRLISA 633
L+F+ + +A + ++ R+F R ISA
Sbjct: 540 LKFDRVQGGENAIKGLNGRFFGGRQISA 567
>gi|295664082|ref|XP_002792593.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278707|gb|EEH34273.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 596
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 154/546 (28%), Positives = 226/546 (41%), Gaps = 150/546 (27%)
Query: 149 RRSSSQSRRSSSRSRRERERESEREREL-ELERERERERE---------LRERERDLEMR 198
R S R R+ R R R +R R R ER+ R R L
Sbjct: 122 RSSGGDYYRGGGRTTRSRSRSPFDDRYYRPTGRPRHDERDDDKRTSRRDRDGRRRSLSGG 181
Query: 199 ESRRYKEKKEVVEPE-ADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRN 257
RR + EP+ + ERD+RTVF Q+ + +++ FF K G V++ +++ DR
Sbjct: 182 RGRRSR----TPEPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRV 237
Query: 258 SRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVL 317
S RSKGVG ++F V + L G +
Sbjct: 238 SGRSKGVG---------------------YVEFKDEESVPLAIQLTGQK----------- 265
Query: 318 VSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID 377
++ +P+ L +EAEKN N A +G +I
Sbjct: 266 ----------LLGIPIIAQL--------------TEAEKNRQARNPEA--NVSGNQNSIP 299
Query: 378 -RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQ 436
+LYVGN+HF++TE+ L+K+FEPFG ++ VQL + E G+ +G+GFVQF A+ A
Sbjct: 300 FHRLYVGNIHFSITESDLQKVFEPFGELDFVQLQKE-EGGRSRGYGFVQFRDPNQAREAL 358
Query: 437 SALNGKLEIVGRTLKV------------------------------SSVTDHVGTQDTAA 466
+NG ++ GR ++V S + H G A
Sbjct: 359 EKMNG-FDLAGRPIRVGLGNDKFTPESTANLLQRFQGQGAHHNFQGSLFSGHGGRGAQAG 417
Query: 467 KSADF------------------DDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGV 508
S +F DD D G+ N SR LM+KL RT
Sbjct: 418 GSGNFDRAGGRDNDKAAGGASALDDTDVAGVNFNNYSRDALMRKLARTD----------- 466
Query: 509 APAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAME 568
PAV ++ + P + A P+ PV NMA S C+LL+NMFDPA E
Sbjct: 467 EPAVEPKPDEKRKVPKPQLN--AKPL-----PVTVNMA-------SRCVLLRNMFDPAEE 512
Query: 569 TDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFA 627
+ E++ DV EC KYG V HI +D + G +YL+F+ + +A + ++ R+F
Sbjct: 513 EGDGWIKELEDDVRAECEEKYGHVVHIALDPNTQGDIYLKFDRVQGGENAIKGLNGRFFG 572
Query: 628 RRLISA 633
R ISA
Sbjct: 573 GRQISA 578
>gi|119586626|gb|EAW66222.1| RNA binding motif protein 23, isoform CRA_a [Homo sapiens]
Length = 483
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 186/420 (44%), Gaps = 94/420 (22%)
Query: 161 RSRRERERESERERELELERERERERELRERERDLEMRESRRY--------KEKKEVVEP 212
R R R R +R E R R+ RE R R + RY +EK V EP
Sbjct: 140 RQCRHRSRSWDRRHGSE-SRSRDHRREDRVHYRSPPLATGYRYGHSKSPHFREKSPVREP 198
Query: 213 --EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIM 269
PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 199 VDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG------ 252
Query: 270 MRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVM 329
I + E+ V +G
Sbjct: 253 ------------------IAYVEFCEIQSVPLAIG------------------------- 269
Query: 330 SVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHF 387
L+GQ LLG P++V+ S+AEKN +N G GP +LYVG+LHF
Sbjct: 270 -------LTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVGSLHF 316
Query: 388 NMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVG 447
N+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG E+ G
Sbjct: 317 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAG 375
Query: 448 RTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIAGS 505
R ++V VT+ + G D D + D G +A R LM KL + GI
Sbjct: 376 RPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQLMAKLAEGAGIQL----- 425
Query: 506 LGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDP 565
P+ +A A + + AVP+ A+ + ++ + S+C L ++F P
Sbjct: 426 ----PSTAAAAAAAAAQAAALQLNGAVPLGALNPAALTALSPA-LNLASQCFQLSSLFTP 480
>gi|426232776|ref|XP_004010396.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Ovis aries]
Length = 447
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 136/405 (33%), Positives = 189/405 (46%), Gaps = 92/405 (22%)
Query: 180 RERERERELRERERDLEMRESRRY--------KEKKEVVEP--EADPE-RDQRTVFAYQM 228
R R+ RE R R + RRY +EK V EP PE RD RTVF Q+
Sbjct: 113 RSRDWRREDRVHYRSPPLATGRRYGHSKSSHFREKSPVREPVDNLSPEERDARTVFCMQL 172
Query: 229 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVI 288
+ RD+ +FFS GKVRDVR+I DRNSRRSKG I
Sbjct: 173 AARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG------------------------I 208
Query: 289 KFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVM 348
+ E+ V +G L+GQ LLG P++
Sbjct: 209 AYVEFCEIQSVPLAIG--------------------------------LTGQRLLGVPII 236
Query: 349 VKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQ 408
V+ S+AEKN + + +A G G + +LYVG+LHFN+TE LR +FEPFG ++ +
Sbjct: 237 VQASQAEKNRLAA--TASNLQKGSGGPV--RLYVGSLHFNITEDMLRGIFEPFGKIDNIV 292
Query: 409 LPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAK 467
L D ETG KG+GF+ F+ E A+ A LNG E+ GR +++ VT+ G D
Sbjct: 293 LMKDSETGCSKGYGFITFSDSECARRALEQLNG-FELAGRPMRIGHVTERPDGGTDITFP 351
Query: 468 SADFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPV 526
D + D G +A R L+ KL + +GI + + A A A QA +L +
Sbjct: 352 DGDQELDLG-----SAGGRLQLVAKLAEGSGIQLPTSTA---AAAAVAQAAAAQAAALQL 403
Query: 527 VGQPAVPV----PAVTAPVIP--NMAAEFIGSPSECLLLKNMFDP 565
G AVP+ PA + P N+A++ I S+C L ++F P
Sbjct: 404 NG--AVPLGALNPAALTALSPALNLASQAIA--SQCFQLSSLFTP 444
>gi|351697087|gb|EHB00006.1| Putative RNA-binding protein 23 [Heterocephalus glaber]
Length = 436
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 132/410 (32%), Positives = 185/410 (45%), Gaps = 84/410 (20%)
Query: 134 RERERDGERRSSSRS----RRSSSQS--RRSSSRSRRERERESERERELELERERERERE 187
R+R+R ERRS SRS +R SQS R SS SR + R RE + R
Sbjct: 79 RDRDRHCERRSGSRSGDRQQRPCSQSWDRPHSSESRSQDWR---REDYVPYRRLPLATGW 135
Query: 188 LRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKV 247
+ RE +E + + PE ERD RTVF Q+ + RD+ +FFS GKV
Sbjct: 136 RYGPSKSPHFRERSPVREPVDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAIGKV 192
Query: 248 RDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDET 307
DVR+I DRNSRRSKG+ ++F + V + L
Sbjct: 193 HDVRIISDRNSRRSKGIA---------------------YVEFCDIQSVPLAIGL----- 226
Query: 308 YTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSA 365
+GQ LLG P++V+ S+AEKN +N
Sbjct: 227 ------------------------------TGQRLLGVPIVVQASQAEKNRLAAMANNLQ 256
Query: 366 GGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQ 425
G+ GP ++LYVG LHFN+TE LR +FEPFG +E + L D ETG KG+GF+
Sbjct: 257 KGSG-GP-----KRLYVGCLHFNITEDMLRGIFEPFGKIENIVLMKDSETGHSKGYGFIT 310
Query: 426 FAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDD---DGGGLAL 481
F++ E A+ A LNG E+ GR ++V +T+ G D D D GG L L
Sbjct: 311 FSESECARRAVEQLNG-FELAGRPMRVGHLTERADGGTDITFPDGDQVVDLGSAGGHLQL 369
Query: 482 NAQSRALLMQKLDRTGIATSIAGSLGVAP--AVNGSAVNQQAISLPVVGQ 529
A+ + + + + GV P A+N +A+ + +L + Q
Sbjct: 370 MAKGSGIHL-PITAAAAQAAALQLNGVVPLSALNPAALTALSPALKLTSQ 418
>gi|268553731|ref|XP_002634852.1| Hypothetical protein CBG13969 [Caenorhabditis briggsae]
Length = 545
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 168/334 (50%), Gaps = 44/334 (13%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTA--TGPYGAIDRK 379
Y+EF+D SVP+ +AL+GQ L+G P+ ++ + AE+N + +N+S T P G +
Sbjct: 212 YVEFWDEESVPLGLALNGQRLMGAPLQIQRTCAERNRI-ANSSVASTLGFVAPGGKGPAQ 270
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
+ V NLH + + L ++F+ FG ++ + + D+ G+ KGF + F + A+ A L
Sbjct: 271 VLVENLHPKIDDKMLGEVFDSFGRIDKLDVEKDM-NGENKGFAVITFRNADEAQKACEQL 329
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDD---DDGG---GLALNAQSRALLMQKL 493
N E+ GR ++++ + Q + A DD G G +L A R LM KL
Sbjct: 330 N-DFEVAGRKMRLTIKQEPTPQQSIKKEEASIHQRSLDDVGDRQGFSLGAGGRQQLMAKL 388
Query: 494 DR-TGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGS 552
+ TG + S +A G N Q IP++A
Sbjct: 389 AQGTGSGMELTASAQMAAQHAG---NSQ---------------------IPSIA------ 418
Query: 553 PSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFEST 611
++C LL NMFDPA ET+P +D +I+ DV E+C+ +G H++VDK S G VY++ S
Sbjct: 419 -TQCFLLSNMFDPAKETEPQWDHDIREDVIEQCACHGGALHVFVDKGSQQGNVYVKCPSI 477
Query: 612 EAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
A A A+H RWF+ ++I+A ++ Y F
Sbjct: 478 AIAHQAVSALHGRWFSGKVITANYVPVNSYHDLF 511
>gi|426232774|ref|XP_004010395.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Ovis aries]
Length = 463
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 136/405 (33%), Positives = 189/405 (46%), Gaps = 92/405 (22%)
Query: 180 RERERERELRERERDLEMRESRRY--------KEKKEVVEP--EADPE-RDQRTVFAYQM 228
R R+ RE R R + RRY +EK V EP PE RD RTVF Q+
Sbjct: 129 RSRDWRREDRVHYRSPPLATGRRYGHSKSSHFREKSPVREPVDNLSPEERDARTVFCMQL 188
Query: 229 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVI 288
+ RD+ +FFS GKVRDVR+I DRNSRRSKG I
Sbjct: 189 AARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG------------------------I 224
Query: 289 KFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVM 348
+ E+ V +G L+GQ LLG P++
Sbjct: 225 AYVEFCEIQSVPLAIG--------------------------------LTGQRLLGVPII 252
Query: 349 VKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQ 408
V+ S+AEKN + + +A G G + +LYVG+LHFN+TE LR +FEPFG ++ +
Sbjct: 253 VQASQAEKNRLAA--TASNLQKGSGGPV--RLYVGSLHFNITEDMLRGIFEPFGKIDNIV 308
Query: 409 LPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAK 467
L D ETG KG+GF+ F+ E A+ A LNG E+ GR +++ VT+ G D
Sbjct: 309 LMKDSETGCSKGYGFITFSDSECARRALEQLNG-FELAGRPMRIGHVTERPDGGTDITFP 367
Query: 468 SADFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPV 526
D + D G +A R L+ KL + +GI + + A A A QA +L +
Sbjct: 368 DGDQELDLG-----SAGGRLQLVAKLAEGSGIQLPTSTA---AAAAVAQAAAAQAAALQL 419
Query: 527 VGQPAVPV----PAVTAPVIP--NMAAEFIGSPSECLLLKNMFDP 565
G AVP+ PA + P N+A++ I S+C L ++F P
Sbjct: 420 NG--AVPLGALNPAALTALSPALNLASQAIA--SQCFQLSSLFTP 460
>gi|335310533|ref|XP_003362077.1| PREDICTED: probable RNA-binding protein 23 [Sus scrofa]
Length = 443
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 123/379 (32%), Positives = 174/379 (45%), Gaps = 93/379 (24%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 143 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 202
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 203 RNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG----------- 230
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
Q LLG P++V+ S+AEKN +N GT GP
Sbjct: 231 ------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKGTG-GPM 265
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+
Sbjct: 266 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECAR 320
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A LNG E+ GR +++ VT+ + G+ D D + D G +A R LM K
Sbjct: 321 RALEQLNG-FELAGRPMRIGHVTERLDGSTDITFPDGDQELDLG-----SAGGRLQLMAK 374
Query: 493 LDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPV----PAVTAPVIP--NMA 546
L A G+ +L + G AVP+ PA + P N+A
Sbjct: 375 L---------AEGSGIQLPTTXXXXXXXXXALQLNG--AVPLGALNPAALTALSPALNLA 423
Query: 547 AEFIGSPSECLLLKNMFDP 565
++ I S+C L ++F P
Sbjct: 424 SQAIA--SQCFQLSSLFTP 440
>gi|116734694|ref|NP_060577.3| probable RNA-binding protein 23 isoform 2 [Homo sapiens]
gi|18848317|gb|AAH24208.1| RNA binding motif protein 23 [Homo sapiens]
gi|119586627|gb|EAW66223.1| RNA binding motif protein 23, isoform CRA_b [Homo sapiens]
gi|119586633|gb|EAW66229.1| RNA binding motif protein 23, isoform CRA_b [Homo sapiens]
Length = 423
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 132/421 (31%), Positives = 186/421 (44%), Gaps = 94/421 (22%)
Query: 160 SRSRRERERESERERELELERERERERELRERERDLEMRESRRY--------KEKKEVVE 211
R R R R +R E R R+ RE R R + RY +EK V E
Sbjct: 79 GRQCRHRSRSWDRRHGSE-SRSRDHRREDRVHYRSPPLATGYRYGHSKSPHFREKSPVRE 137
Query: 212 P--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAI 268
P PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 138 PVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGI---- 193
Query: 269 MMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDV 328
++F + V + L
Sbjct: 194 -----------------AYVEFCEIQSVPLAIGL-------------------------- 210
Query: 329 MSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLH 386
+GQ LLG P++V+ S+AEKN +N G GP +LYVG+LH
Sbjct: 211 ---------TGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVGSLH 255
Query: 387 FNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIV 446
FN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG E+
Sbjct: 256 FNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELA 314
Query: 447 GRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIAG 504
GR ++V VT+ + G D D + D G +A R LM KL + GI
Sbjct: 315 GRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQLMAKLAEGAGIQL---- 365
Query: 505 SLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFD 564
P+ +A A + + AVP+ A+ + ++ + S+C L ++F
Sbjct: 366 -----PSTAAAAAAAAAQAAALQLNGAVPLGALNPAALTALSPA-LNLASQCFQLSSLFT 419
Query: 565 P 565
P
Sbjct: 420 P 420
>gi|410931844|ref|XP_003979305.1| PREDICTED: RNA-binding protein 39-like, partial [Takifugu rubripes]
Length = 324
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/283 (35%), Positives = 138/283 (48%), Gaps = 68/283 (24%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNT 276
ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DR+SRRSKG+
Sbjct: 35 ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRMISDRSSRRSKGIA----------- 83
Query: 277 LHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIA 336
I+F + V + L
Sbjct: 84 ----------YIEFVEASSVPLAIGL---------------------------------- 99
Query: 337 LSGQLLLGQPVMVKPSEAEKN----LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTET 392
+GQ LLG P++V+ S+AEKN + +A G G + +LYVG+LHFN+TE
Sbjct: 100 -TGQRLLGVPIIVQASQAEKNRAAAAAAAAAAANNLQKGMMGPL--RLYVGSLHFNITEE 156
Query: 393 QLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 452
LR +FEPFG +E +QL +D +TG+ KG+GF+ FA E AK A LNG E+ GR +KV
Sbjct: 157 MLRGIFEPFGRIENIQLMMDTDTGRSKGYGFITFADAECAKKALEQLNG-FELAGRPMKV 215
Query: 453 SSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL 493
VT+ D++ A D +D G+ L R LM +L
Sbjct: 216 GHVTER---SDSSGAPAFLDGEDLERSGIDLGNPGRLQLMAQL 255
>gi|261191422|ref|XP_002622119.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239589885|gb|EEQ72528.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239612708|gb|EEQ89695.1| RNA splicing factor [Ajellomyces dermatitidis ER-3]
gi|327351781|gb|EGE80638.1| RNA splicing factor [Ajellomyces dermatitidis ATCC 18188]
Length = 583
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 169/627 (26%), Positives = 259/627 (41%), Gaps = 147/627 (23%)
Query: 64 RDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERE 123
+ DE +GSR +R + + R R E++ + D E + ++
Sbjct: 29 KSHDESSGSRSERRDRDRDRERKRRDRSRE-----RRHEKDADGDEEMKSPKSDRASANG 83
Query: 124 RRERRDREKERERERDGERRSSSRSRRSS------SQSRRSSSRSRRERERESERERELE 177
R R + R+ E+ RR RSS R + SRSR + R
Sbjct: 84 SHRSRKRSRSRDSEKRRSRRDRDDPYRSSGGDYYRGPGRTTRSRSRSPYDDRYYRPTGRS 143
Query: 178 LERERERERELRERERDLEMRESRRYKEKKEVVEPE-ADPERDQRTVFAYQMPLKATERD 236
ER+ +R +R+RD R + + EP+ + ERD+RTVF Q+ + ++
Sbjct: 144 RRDERDEDRRSSKRDRDGRRRSPSSGRRRSRTPEPQLTEDERDRRTVFVQQLAARLRTKE 203
Query: 237 VYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEV 296
+ FF K G V++ +++ DR S RSKGVG ++F V
Sbjct: 204 LIAFFEKVGPVKEAQIVKDRVSGRSKGVG---------------------YVEFKDEESV 242
Query: 297 GMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEK 356
+ L G + ++ +P+ L +EAEK
Sbjct: 243 PLAIQLTGQK---------------------LLGIPIIAQL--------------TEAEK 267
Query: 357 NLVQSNTSAGGTATGPYGAID-RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIET 415
N N A A+G +I +LYVGN+HF++TE+ L+K+FEPFG ++ VQL + E
Sbjct: 268 NRQARNPEA--NASGNQNSIPFHRLYVGNIHFSITESDLQKVFEPFGELDFVQLQKE-EG 324
Query: 416 GQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV----------------------- 452
G+ +G+GFVQF A+ A +NG ++ GR ++V
Sbjct: 325 GRSRGYGFVQFRDPNQAREALEKMNG-FDLAGRPIRVGLGNDKFTPESTANLLQRFQGQG 383
Query: 453 -------SSVTDHVGTQDTAAKSADF------------------DDDDGGGLALNAQSRA 487
S + H G A S F DD D G+ N SR
Sbjct: 384 AHHNFQGSLFSGHGGRGAQAGGSGHFDRAGGRDNDKAAGGASALDDTDVAGVNFNNYSRD 443
Query: 488 LLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAA 547
LM+KL RT PAV + ++ + P + +PV NMA
Sbjct: 444 ALMRKLARTD-----------EPAVEPTPDEKRKVPKPQINAKPLPVSV-------NMA- 484
Query: 548 EFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYL 606
S C+LL+NMFDPA E + E++ DV EC KYG V HI +D + G +YL
Sbjct: 485 ------SRCVLLRNMFDPAEEEGESWVKELEDDVRAECEDKYGHVVHIALDPNTQGDIYL 538
Query: 607 RFESTEAAASAQRAMHMRWFARRLISA 633
+F+ + +A + ++ R+F R ISA
Sbjct: 539 KFDRVQGGENAIKGLNGRFFGGRQISA 565
>gi|119586634|gb|EAW66230.1| RNA binding motif protein 23, isoform CRA_h [Homo sapiens]
Length = 467
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 186/420 (44%), Gaps = 94/420 (22%)
Query: 161 RSRRERERESERERELELERERERERELRERERDLEMRESRRY--------KEKKEVVEP 212
R R R R +R E R R+ RE R R + RY +EK V EP
Sbjct: 124 RQCRHRSRSWDRRHGSE-SRSRDHRREDRVHYRSPPLATGYRYGHSKSPHFREKSPVREP 182
Query: 213 --EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIM 269
PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 183 VDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIA---- 238
Query: 270 MRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVM 329
++F + V + L
Sbjct: 239 -----------------YVEFCEIQSVPLAIGL--------------------------- 254
Query: 330 SVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHF 387
+GQ LLG P++V+ S+AEKN +N G GP +LYVG+LHF
Sbjct: 255 --------TGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVGSLHF 300
Query: 388 NMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVG 447
N+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG E+ G
Sbjct: 301 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAG 359
Query: 448 RTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIAGS 505
R ++V VT+ + G D D + D G +A R LM KL + GI
Sbjct: 360 RPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQLMAKLAEGAGIQL----- 409
Query: 506 LGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDP 565
P+ +A A + + AVP+ A+ + ++ + S+C L ++F P
Sbjct: 410 ----PSTAAAAAAAAAQAAALQLNGAVPLGALNPAALTALSPA-LNLASQCFQLSSLFTP 464
>gi|399218373|emb|CCF75260.1| unnamed protein product [Babesia microti strain RI]
Length = 485
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 172/360 (47%), Gaps = 76/360 (21%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLV-------QSNTSAGGTATGPYG 374
Y+EFY SV A+++SG LL QP+ V S+AEKN Q+N S
Sbjct: 166 YVEFYTNDSVIKALSMSGHFLLNQPIRVTASQAEKNRAAKASKEFQTNESE--------- 216
Query: 375 AIDRKLYVGNL---HFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEH 431
+ +LYVG L N++E +LR+LF PFG + V+L D TG+ KGF F+++ +
Sbjct: 217 -MPLRLYVGGLVDSLVNISENELRQLFVPFGEILSVELHRDPFTGKPKGFAFIEYKRASE 275
Query: 432 AKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAA-------------------KSADFD 472
A+ A A++G EI GR +KV+ +D+ TA K ++D
Sbjct: 276 AREAMLAMDG-FEISGRNIKVNLTSDNRPNAYTALNGLNNAQKITNDLDRLEKEKMEEYD 334
Query: 473 DDDGGGLALNAQSRALLMQKLDRTG-IATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPA 531
D L A S+ LM++L+R G + TS SL A + P
Sbjct: 335 SD----LMPGAVSKIELMKRLNRDGDLPTSNKTSLDAAKVI-----------------PG 373
Query: 532 VPVPAVTAPVIPNMAAEFIGSPSECLLLKNMF---DPAMETDPDFDLEIQGDVEEECSKY 588
V P +A V +E ++L NMF DP + DP+F ++ DV+ EC KY
Sbjct: 374 VSAPGNSATV----------GVTENIVLSNMFSATDPQIMEDPEFFTDLVEDVKSECKKY 423
Query: 589 GRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKFKS 647
G V +Y++K G V+++F + E A +A ++++ R+F ISA F + + K+
Sbjct: 424 GNVLQVYINKSVPDGMVWVKFATVEQAVAAFQSLNDRFFGGNSISAAFATNHTWLSTCKA 483
>gi|58267808|ref|XP_571060.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134112313|ref|XP_775132.1| hypothetical protein CNBE4060 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257784|gb|EAL20485.1| hypothetical protein CNBE4060 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227294|gb|AAW43753.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 615
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 135/438 (30%), Positives = 207/438 (47%), Gaps = 77/438 (17%)
Query: 221 RTVFAYQMPLKATERDVYEFFSKA---GKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTL 277
R++F Q+ + T + + FF G VRD R++ D+ +RRSKG+G + D
Sbjct: 242 RSIFVSQLSARMTSQVLGLFFEDKLGRGAVRDARVVTDKVARRSKGIGYVELDSVD---- 297
Query: 278 HSCLINSCCVIKFFLVAEVGMVFFLLGDE---TYTVLDPATVLVSY--RYIEFYDVMSVP 332
L+N + +V + + L E + T L AT L S + SVP
Sbjct: 298 ---LVNKALALSGTVVMGIPINIMLTEAERNHSGTELITATALASNARSHGGGGGRSSVP 354
Query: 333 MA---IALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNM 389
LS L L P + P +A K+ A PY +L+V NL F++
Sbjct: 355 FTQNYPPLSTGLAL--PPGLDP-DAHKD-----------AAIPY----HRLFVSNLAFSL 396
Query: 390 TETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRT 449
T +R++FEPFG +E V L D+ +G KG +VQF ++ A+ A A+ G ++ GR
Sbjct: 397 TADDVRQVFEPFGEIEFVDLHTDL-SGLRKGTAYVQFKDVKSAQMALDAMAG-FDLAGRL 454
Query: 450 LKVSSVTDHVGTQDTAAKSADFDDDDGG-GLALNAQSRALLMQKLDRTGIATSIAGSLGV 508
+KV ++ + GT T D +D G G L+A R LM KL RT +++ S
Sbjct: 455 IKVQTIQER-GTYQTP----DLIEDSGNYGTRLDANQRQQLMFKLARTEPNVNLSLS--- 506
Query: 509 APAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAME 568
AP +NGS IP M P+ +++ NMF+P E
Sbjct: 507 APKINGSQSK-----------------------IPAM------DPTPRIVVHNMFNPEEE 537
Query: 569 TDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFA 627
T+ ++DL++ DV+ E SKYGRVK I V+K SAG VY+ F T++A A + ++ R+F
Sbjct: 538 TERNWDLDLAEDVKGEVESKYGRVKRIKVEKMSAGEVYIEFIDTDSAIKAVKGLNGRFFG 597
Query: 628 RRLISAIFMKPEDYEAKF 645
R + A ++ + A
Sbjct: 598 GRQLQAGYITEALFNAHL 615
>gi|17543644|ref|NP_500025.1| Protein Y55F3AM.3, isoform a [Caenorhabditis elegans]
gi|373220572|emb|CCD74059.1| Protein Y55F3AM.3, isoform a [Caenorhabditis elegans]
Length = 580
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 197/471 (41%), Gaps = 128/471 (27%)
Query: 185 ERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKA 244
E ERDQRT+ Q+ RD+ EFFS
Sbjct: 161 ELTAE---------------------------ERDQRTLLIMQIARDTRPRDLEEFFSAV 193
Query: 245 GKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLG 304
G VRDVR+I D + RSKG+ C +
Sbjct: 194 GAVRDVRIITDSRTGRSKGI---------------CYV---------------------- 216
Query: 305 DETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTS 364
EF+D SVP+ +AL+GQ L+G P+ ++ + AE+N +++
Sbjct: 217 -------------------EFWDEESVPLGLALNGQRLMGAPLQIQRTCAERNRAANSSV 257
Query: 365 A---GGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGF 421
A G A G G + V NLH + E +R +FE FG +E + L +D + +GF
Sbjct: 258 ASTLGFVAPGNKGPT--HVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVD-SNRENRGF 314
Query: 422 GFVQFAQLEHAKAAQSALNGKLEIVGRTLKVS----SVTDHVGTQDTAAKSADFDD-DDG 476
+ F + A+ + LN E+ GR +++S S V ++ + DD D
Sbjct: 315 ATITFRNADDAQKSCEQLN-NFELAGRCIRLSIKQESQAPAVKKEEASIHQRSLDDVGDR 373
Query: 477 GGLALNAQSRALLMQKLDR-TGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVP 535
G +L A R LM KL + TG + S +A G +
Sbjct: 374 QGFSLGAGGRQQLMAKLAQGTGSGMELTASAQMAAQHAGHS------------------- 414
Query: 536 AVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIY 595
IP++A ++C LL NMFDP+ ET+P +D +I+ DV E+C +G H++
Sbjct: 415 -----QIPSIA-------TQCFLLSNMFDPSKETEPAWDHDIREDVIEQCLAHGGALHVF 462
Query: 596 VDKRS-AGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
VDK S G VY++ S A A A+H RWF+ ++I+A ++ Y F
Sbjct: 463 VDKGSEQGNVYVKCPSIVIAHQAVSALHGRWFSGKVITANYVPVNSYHDLF 513
>gi|67517282|ref|XP_658521.1| hypothetical protein AN0917.2 [Aspergillus nidulans FGSC A4]
gi|40746790|gb|EAA65946.1| hypothetical protein AN0917.2 [Aspergillus nidulans FGSC A4]
gi|259488796|tpe|CBF88530.1| TPA: RNA splicing factor (Pad-1), putative (AFU_orthologue;
AFUA_1G15810) [Aspergillus nidulans FGSC A4]
Length = 552
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 163/359 (45%), Gaps = 90/359 (25%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNT--SAGGTATGPYGAIDRK 379
Y+EF D SV AI L+GQ LLG P++ + +EAEKN N+ S+G + P+ +
Sbjct: 219 YVEFKDESSVAPAIQLTGQKLLGIPIIAQLTEAEKNRQARNSEASSGNKHSAPF----HR 274
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVGN+HF++ E L+ +FEPFG +E VQL D ETG+ +G+GFVQF A+ A +
Sbjct: 275 LYVGNIHFSIDENDLQSVFEPFGELEFVQLQKD-ETGRSRGYGFVQFRDPNQAREALEKM 333
Query: 440 NGKLEIVGRTLKVSSVTDHV---GTQDTAAKSAD-------------------------- 470
NG ++ GR ++V D TQ T ++SA+
Sbjct: 334 NG-YDLGGRAIRVGLGNDKFTPENTQRTQSQSANQSNFQGSMFSGSGGRGVQAGGTSNFD 392
Query: 471 ---------------FDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGS 515
DD D G+ N SR LM+KL RT PA +
Sbjct: 393 RAGGREPEKGTAASALDDTDVAGVNFNNFSRDALMRKLARTD-----------EPAEPSA 441
Query: 516 AVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDL 575
QQ I LP P P PV NMA+ E +
Sbjct: 442 DDKQQKILLPKT----EPKP---LPVNVNMASR-------------------EEGESWVK 475
Query: 576 EIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
E++ DV EC KYG V HI +D S G +YL+F+ + +A + ++ R+F R I+A
Sbjct: 476 ELEDDVRAECEEKYGHVVHIALDPNSQGDIYLKFDRVQGGENAIKGLNGRFFGGRQITA 534
>gi|12803481|gb|AAH02566.1| RNA binding motif protein 23 [Homo sapiens]
gi|189055004|dbj|BAG37988.1| unnamed protein product [Homo sapiens]
gi|312151810|gb|ADQ32417.1| RNA binding motif protein 23 [synthetic construct]
Length = 424
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 135/420 (32%), Positives = 187/420 (44%), Gaps = 91/420 (21%)
Query: 160 SRSRRERERESERERELELERERERERELRERERDLEMRESRRY--------KEKKEVVE 211
R R R R +R E R R+ RE R R + RY +EK V E
Sbjct: 79 GRQCRHRSRSWDRRHGSE-SRSRDHRREDRVHYRSPPLATGYRYGHSKSPHFREKSPVRE 137
Query: 212 P--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAI 268
P PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 138 PVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGI---- 193
Query: 269 MMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDV 328
++F + V + L
Sbjct: 194 -----------------AYVEFCEIQSVPLAIGL-------------------------- 210
Query: 329 MSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLH 386
+GQ LLG P++V+ S+AEKN +N G GP +LYVG+LH
Sbjct: 211 ---------TGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVGSLH 255
Query: 387 FNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIV 446
FN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG E+
Sbjct: 256 FNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELA 314
Query: 447 GRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGS 505
GR ++V VT+ + G D D + D G +A R LM KL A
Sbjct: 315 GRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQLMAKL-----AEGAGIQ 364
Query: 506 LGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDP 565
L A +A QA +L + G AVP+ A+ + ++ + S+C L ++F P
Sbjct: 365 LPSTAAAAAAAAAAQAAALQLNG--AVPLGALNPAALTALSPA-LNLASQCFQLSSLFTP 421
>gi|387539270|gb|AFJ70262.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
Length = 423
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 173/374 (46%), Gaps = 85/374 (22%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 125 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 184
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L
Sbjct: 185 RNSRRSKGI---------------------AYVEFCEIQSVPLAIGL------------- 210
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
+GQ LLG P++V+ S+AEKN +N G+ GP
Sbjct: 211 ----------------------TGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSG-GPM 247
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+
Sbjct: 248 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECAR 302
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A LNG E+ GR ++V VT+ + G D D + D G +A R LM K
Sbjct: 303 RALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDPG-----SAGGRLQLMAK 356
Query: 493 L-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIG 551
L + +GI P +A A + + AVP+ A+ + ++ +
Sbjct: 357 LAEGSGIQL---------PTTAAAAAAAAAHAAALQLNGAVPLGALNPAALTALSPA-LN 406
Query: 552 SPSECLLLKNMFDP 565
S+C L ++F P
Sbjct: 407 LASQCFQLSSLFTP 420
>gi|358342556|dbj|GAA49996.1| RNA-binding protein 39 [Clonorchis sinensis]
Length = 730
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 154/312 (49%), Gaps = 68/312 (21%)
Query: 189 RERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVR 248
R R+ L + Y + E+ PE ERD RTVF +Q+ + +RD+ +FF+ GK+R
Sbjct: 51 RNRKLSLSILAVELYSCRPELT-PE---ERDARTVFVWQLSARIRQRDLEDFFTSVGKIR 106
Query: 249 DVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETY 308
DVRLIMD ++RSKG+
Sbjct: 107 DVRLIMDNKTKRSKGIA------------------------------------------- 123
Query: 309 TVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGT 368
V +R +E S +A+ L+G LLG P+ ++ S AEKN + + S
Sbjct: 124 --------YVEFREVE-----SAQLALGLTGTRLLGVPIQIQQSHAEKNRMNAIPSVPKP 170
Query: 369 ATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQ 428
G + KLY+G+LH+N+TE L+ +FEPFG ++ ++L D TG+ +G+GFV +A
Sbjct: 171 TQQNRGPM--KLYIGSLHYNITEEMLKGIFEPFGKIDDIKLIKDPATGRSQGYGFVTYAN 228
Query: 429 LEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSA-DFDDDDGGGLALNAQSRA 487
+ AK A LNG E+ GR +KV+ VT+ + AA SA D DD D G+ L R
Sbjct: 229 SDDAKKALDQLNG-FELAGRPMKVNHVTER---GEYAALSALDNDDADRAGVDLGTTGRL 284
Query: 488 LLMQKL-DRTGI 498
LM KL + TG+
Sbjct: 285 ALMAKLAEGTGL 296
>gi|149756178|ref|XP_001494868.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Equus
caballus]
Length = 446
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 121/372 (32%), Positives = 176/372 (47%), Gaps = 81/372 (21%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 144 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 203
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 204 RNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG----------- 231
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
Q LLG P++V+ S+AEKN +N G+ GP
Sbjct: 232 ------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKGSG-GPM 266
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+
Sbjct: 267 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECAR 321
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A LNG E+ GR ++V VT+ + G+ D D + D G +A SR LM K
Sbjct: 322 RALEQLNG-FELAGRPMRVGHVTERLDGSTDITFPDGDQELDLG-----SAGSRLQLMAK 375
Query: 493 L-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIG 551
L + +GI + A A + A+ L + A+ +P + N+A++ I
Sbjct: 376 LAEGSGIQLPTTAAAAAAAAQAAALQLNGAVPLGALNPTAL---TALSPAL-NLASQAIA 431
Query: 552 SPSECLLLKNMF 563
S+C L ++F
Sbjct: 432 --SQCFQLSSLF 441
>gi|402875680|ref|XP_003901625.1| PREDICTED: probable RNA-binding protein 23 [Papio anubis]
Length = 497
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 129/408 (31%), Positives = 183/408 (44%), Gaps = 97/408 (23%)
Query: 181 ERERERELRERERDLEMRESRR-----------------YKEKKEVVEP--EADPE-RDQ 220
+R ELR R+R E R S R ++EK V EP PE RD
Sbjct: 161 DRRHSSELRSRDRRHEDRVSYRSPPLAAGYRYGHSKSPHFREKSPVREPVDNLSPEERDA 220
Query: 221 RTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSC 280
RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 221 RTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIA--------------- 265
Query: 281 LINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQ 340
++F + V + L +GQ
Sbjct: 266 ------YVEFCEIQSVPLAIGL-----------------------------------TGQ 284
Query: 341 LLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLF 398
LLG P++V+ S+AEKN +N G+ GP +LYVG+LHFN+TE LR +F
Sbjct: 285 RLLGVPIIVQASQAEKNRLAAMANNLQKGSG-GPM-----RLYVGSLHFNITEDMLRGIF 338
Query: 399 EPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDH 458
EPFG ++ + L D +TG KG+GF+ F+ E A+ A LNG E+ GR ++V VT+
Sbjct: 339 EPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVGHVTER 397
Query: 459 V-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAV 517
+ G D D + D G +A R LM KL G + + A A +A
Sbjct: 398 LDGGTDITFPDGDQELDPG-----SAGGRLQLMAKLAE-GSGIQLPTTAAAAAAAAAAAA 451
Query: 518 NQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDP 565
+ A+ L AVP+ A+ + ++ + S+C L ++F P
Sbjct: 452 HAAALQL----NGAVPLGALNPAALTALSPA-LNLASQCFQLSSLFTP 494
>gi|48146631|emb|CAG33538.1| RNPC4 [Homo sapiens]
Length = 423
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 132/421 (31%), Positives = 184/421 (43%), Gaps = 94/421 (22%)
Query: 160 SRSRRERERESERERELELERERERERELRERERDLEMRESRRY--------KEKKEVVE 211
R R R R +R E R R+ RE R R + RY +EK V E
Sbjct: 79 GRQCRHRSRSWDRRHGSE-SRSRDHRREDRVHYRSPPLATGYRYGHSKSPHFREKSPVRE 137
Query: 212 P--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAI 268
P PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 138 PVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGI---- 193
Query: 269 MMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDV 328
++F + V + L
Sbjct: 194 -----------------AYVEFCEIQSVPLAIGL-------------------------- 210
Query: 329 MSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLH 386
+GQ LLG P++V+ S+AEKN +N G GP +LYVG+LH
Sbjct: 211 ---------TGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVGSLH 255
Query: 387 FNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIV 446
FN+TE LR +FEPFG ++ + L D +TG+ KG+G + F+ E A+ A LNG E+
Sbjct: 256 FNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGLITFSDSECARRALEQLNG-FELA 314
Query: 447 GRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIAG 504
GR ++V VT+ + G D D + D G +A R LM KL + GI
Sbjct: 315 GRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQLMAKLAEGAGIQL---- 365
Query: 505 SLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFD 564
P+ +A A + + AVP+ A+ P + + S+C L ++F
Sbjct: 366 -----PSTAAAAAAAAAQAAALQLNGAVPLGALN-PAALTALSPALNLASQCFQLSSLFT 419
Query: 565 P 565
P
Sbjct: 420 P 420
>gi|327289313|ref|XP_003229369.1| PREDICTED: probable RNA-binding protein 23-like [Anolis
carolinensis]
Length = 445
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 124/375 (33%), Positives = 179/375 (47%), Gaps = 84/375 (22%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S Y+EK + EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 144 KSPLYREKSPLREPLGSLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 203
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 204 RNSRRSKGIA---------------------YVEFCEIQSVPLAIGLTG----------- 231
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
Q LLG P++V+ S+AEKN +N G+ GP
Sbjct: 232 ------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKGSG-GPM 266
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LH N+T+ LR +FEPFG ++ + L D +TGQ KG+GF+ F++ E A+
Sbjct: 267 -----RLYVGSLHCNITKEMLRGIFEPFGKIDSIVLMRDQDTGQSKGYGFITFSEAECAR 321
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL-LMQ 491
A LNG E+ GR ++V VT+ + GT D + D+ D GL L A L LM
Sbjct: 322 RALEQLNG-FELAGRPMRVGQVTERLDGTTDITFPDGN-DEPDRSGLNLGATGSQLQLMA 379
Query: 492 KL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFI 550
KL + +G+ S + A +NG AI L + A+ +P + N+A++ +
Sbjct: 380 KLAEGSGLPLSTTAAAQAALQLNG------AIPLGALNPAAL---TALSPAL-NLASQTL 429
Query: 551 GSPSECLLLKNMFDP 565
S+C L +F P
Sbjct: 430 A--SQCFQLSGLFTP 442
>gi|387539272|gb|AFJ70263.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
Length = 439
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 172/374 (45%), Gaps = 85/374 (22%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 141 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 200
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 201 RNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG----------- 228
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
Q LLG P++V+ S+AEKN +N G+ GP
Sbjct: 229 ------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKGSG-GPM 263
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+
Sbjct: 264 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECAR 318
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A LNG E+ GR ++V VT+ + G D D + D G +A R LM K
Sbjct: 319 RALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDPG-----SAGGRLQLMAK 372
Query: 493 L-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIG 551
L + +GI P +A A + + AVP+ A+ + ++ +
Sbjct: 373 LAEGSGIQL---------PTTAAAAAAAAAHAAALQLNGAVPLGALNPAALTALSPA-LN 422
Query: 552 SPSECLLLKNMFDP 565
S+C L ++F P
Sbjct: 423 LASQCFQLSSLFTP 436
>gi|428672327|gb|EKX73241.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 511
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 171/331 (51%), Gaps = 72/331 (21%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN-------LVQSNTSAGGTATGPYG 374
Y+EFY SV A++++G L GQ + ++ S+AEKN ++Q +A + P+
Sbjct: 217 YVEFYTQESVIKALSMTGLDLKGQRIKIQSSQAEKNRAAKAAKMLQQ--TAMDASDSPF- 273
Query: 375 AIDRKLYVGNLHFNMT---ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEH 431
+YVG L ++ E +L++LF PFG + V++ D ETG+ KG+ F++F +
Sbjct: 274 ----TIYVGGLIGALSALNEVELKQLFSPFGTIIDVEIFRDPETGESKGYAFLKFRRSSE 329
Query: 432 AKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSA---DFD----DDDGGGLALNAQ 484
AK A + +NG +I G+ +KV ++ T D+ ++ + D D DDDGGGL A
Sbjct: 330 AKEAMNTMNG-FDIGGQQIKVGYA--NLNTTDSKSRLSSLGDVDIERLDDDGGGLISGAT 386
Query: 485 SRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPN 544
++ LM+KL RT AP+
Sbjct: 387 NKIALMEKLQRT----------------------------------------TAAPISAT 406
Query: 545 MAAEFIGSPSECLLLKNMF---DPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA 601
++ P+ ++L NMF DP + +P+F +EI+ DV+EEC KYG+V +Y++K++
Sbjct: 407 FSSGKASGPTSNIILSNMFTANDPGAD-EPNFFVEIEEDVKEECEKYGKVVAVYLNKKTI 465
Query: 602 -GFVYLRFESTEAAASAQRAMHMRWFARRLI 631
G V+++F+++ A++A + ++ R+FA I
Sbjct: 466 DGKVWVKFQNSTDASTAYKGLNGRYFAGNTI 496
>gi|124513200|ref|XP_001349956.1| splicing factor, putative [Plasmodium falciparum 3D7]
gi|23615373|emb|CAD52364.1| splicing factor, putative [Plasmodium falciparum 3D7]
Length = 864
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 171/348 (49%), Gaps = 61/348 (17%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EFY +V A+A +G +L +P+ ++ S+AEKN ++ +A P I KLY
Sbjct: 533 YVEFYTQEAVIKALAANGMMLKNRPIKIQSSQAEKN--RAAKAAKHQPIDP-NDIPLKLY 589
Query: 382 VGNLH---FNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+G L N+TE +L++LF PFG + V++ D TG+ KGFGF+QF + A A +
Sbjct: 590 IGGLLGPLSNITEQELKQLFNPFGDILDVEIHRDPYTGKSKGFGFIQFHKASEAIEALTV 649
Query: 439 LNGKLEIVGRTLKVSSVTD------------HVGTQDTAAKSADFDDDDGGG-------- 478
+NG +E+ GR +KV D ++ Q AK+ + ++++
Sbjct: 650 MNG-MEVAGREIKVGYAQDSKYLLACDNTQENILKQQQMAKNINTEEEEQDNEKIDNDDG 708
Query: 479 ----LALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPV 534
L S+ LMQKL R I I + + A
Sbjct: 709 DGGGLIAGTGSKIALMQKLQRDSI-----------------------IDPNIPSRYATGA 745
Query: 535 PAVTA--PVIPNMAAEFIGSPSECLLLKNMF---DPAMETDPDFDLEIQGDVEEECSKYG 589
A+ A +P+ + + L+L NMF D + +DPDF +I DV+EECSKYG
Sbjct: 746 NAIMARNSFVPSTNNI-NNNVTTNLVLSNMFSSNDENIGSDPDFFNDILEDVKEECSKYG 804
Query: 590 RVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFM 636
+V +I++D ++ G +Y+++ + + + + + ++ R+F LI+A F+
Sbjct: 805 KVVNIWLDTKNIDGKIYIKYSNNDESLKSFQFLNGRYFGGSLINAYFI 852
>gi|296214508|ref|XP_002753659.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Callithrix
jacchus]
Length = 439
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 124/374 (33%), Positives = 176/374 (47%), Gaps = 84/374 (22%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 140 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 199
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 200 RNSRRSKGIA---------------------YVEFCEIQSVPLAIGLTG----------- 227
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
Q LLG P++V+ S+AEKN +N GT GP
Sbjct: 228 ------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKGTG-GPM 262
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+
Sbjct: 263 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECAR 317
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A LNG E+ GR ++V VT+ + G D D + D G +A LM K
Sbjct: 318 RAMDQLNG-FELAGRPMRVGHVTEQLDGGTDITFPDGDQELDLG-----SAGGCLQLMAK 371
Query: 493 L-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIG 551
L + +GI L A +A QA +L + G AVP+ A+ V+ ++ +
Sbjct: 372 LAEGSGI------QLPSTTATAAAAAAAQAAALQLNG--AVPLGALNPAVLTALSPA-LN 422
Query: 552 SPSECLLLKNMFDP 565
S+C L ++F P
Sbjct: 423 LASQCFQLSSLFTP 436
>gi|341038993|gb|EGS23985.1| RNA splicing factor (pad-1)-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 594
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 196/467 (41%), Gaps = 142/467 (30%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNT 276
ERD+RTVF Q+ + R++ EFF KAG V + +++ DR S RSKGVG
Sbjct: 226 ERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVG----------- 274
Query: 277 LHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIA 336
++F V L G + ++ +P
Sbjct: 275 ----------YVEFKSEESVAAALQLTGQK---------------------LLGIP---- 299
Query: 337 LSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRK 396
++V+P+EAEKN TS + P+ +LYVGN+HF++TET L+
Sbjct: 300 ----------IIVQPTEAEKNRQARTTSGHHPNSVPF----HRLYVGNIHFSITETDLQH 345
Query: 397 LFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV---- 452
+FEPFG +E VQL D E G+ +G+GFVQF +A+ A +NG ++ GR ++V
Sbjct: 346 VFEPFGELEFVQLQKD-ENGRSRGYGFVQFRDAANAREALEKMNG-FDLAGRPIRVGLGN 403
Query: 453 -------------------------------SSVTDHVGTQDT--AAKSADFDDDDGGGL 479
+S D G +D+ + ++ DD D G+
Sbjct: 404 DKFTPESTANLLRGFPGQGSAFSGAGGRGPPASTFDRAGGRDSDKVSGASALDDTDVAGV 463
Query: 480 ALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTA 539
N SR LM+KL RT + A +Q + V +PV
Sbjct: 464 NFNNYSRDALMRKLART----------------DEPAPERQILKPKTVETKPLPVNV--- 504
Query: 540 PVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDK 598
NMA+ G D+ E++ +V +E KYG V HI VD
Sbjct: 505 ----NMASRQQGE-------------------DWIKELEDEVRQEAEEKYGHVVHIAVDP 541
Query: 599 RSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
S G +YL+F+ + +A + ++ R+F R+I+A + Y + F
Sbjct: 542 NSNGDIYLKFDKVQGGENAIKGLNGRYFDGRMITAAPVVDAVYSSLF 588
>gi|397473313|ref|XP_003808159.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Pan paniscus]
Length = 442
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 144/301 (47%), Gaps = 74/301 (24%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 141 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 200
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L
Sbjct: 201 RNSRRSKGI---------------------AYVEFCEIQSVPLAIGL------------- 226
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
+GQ LLG P++V+ S+AEKN +N G GP
Sbjct: 227 ----------------------TGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM 263
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+
Sbjct: 264 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECAR 318
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A LNG E+ GR ++V VT+ + G D D + D G +A R LM K
Sbjct: 319 RALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQLMAK 372
Query: 493 L 493
L
Sbjct: 373 L 373
>gi|451845251|gb|EMD58564.1| hypothetical protein COCSADRAFT_103344 [Cochliobolus sativus
ND90Pr]
Length = 569
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 175/366 (47%), Gaps = 65/366 (17%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF D SVP A+ L+GQ L G P++ + +EAEKN + G R LY
Sbjct: 220 YVEFKDEESVPQALELTGQKLKGVPIIAQLTEAEKNRAARPSEGGAAPGANGAPFHR-LY 278
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLD-IETGQCKGFGFVQFAQLEHAKAAQSALN 440
VGN+HF++TE L+++FEPFG +E V L D + G+ KG+GFVQF HAK A + +N
Sbjct: 279 VGNIHFSVTEKDLQEIFEPFGELEQVILQRDEMNPGRSKGYGFVQFVDPSHAKNALAEMN 338
Query: 441 GKLEIVGRTLKVSSVTDHVGTQDTA---------AKSAD--------------------F 471
G E+ GR ++V D + TA A+S F
Sbjct: 339 G-FELAGRQIRVGLGNDKFTPESTANLLRTFSQQAQSYQGSAFSGAGGRGAYAGGSGGVF 397
Query: 472 D-----DDDG--GGLALNAQSRA-LLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAIS 523
D DD G G AL+ A + + DR+ + ++A P G+
Sbjct: 398 DRTHSKDDRGVSGASALDDTDVAGVNFKTYDRSKLMDALARRDNPEPTKQGAQ------- 450
Query: 524 LPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAME---TDPDFDLEIQGD 580
PVV +P VPV V P+ S+C+ ++N FDP E ++ +++ +
Sbjct: 451 -PVVSKPRVPV--VDKPMA-----------SKCIKIENAFDPDEEQRNWGDNWVKDLELE 496
Query: 581 VEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPE 639
V+ EC KYG+V HI VD S G ++++F+S A + ++ R F R I A ++ +
Sbjct: 497 VKSECDKKYGKVVHIAVDTNSEGDIFVKFDSVSGGEKALQGLNGRNFNHRTIRASYVVDK 556
Query: 640 DYEAKF 645
Y + +
Sbjct: 557 IYNSLW 562
>gi|33150650|gb|AAP97203.1|AF087905_1 splicing factor SF2 [Homo sapiens]
Length = 425
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 184/420 (43%), Gaps = 90/420 (21%)
Query: 160 SRSRRERERESERERELELERERERERELRERERDLEMRESRRY--------KEKKEVVE 211
R R R R +R E R R+ RE R R + RY +EK V E
Sbjct: 79 GRQCRHRSRSWDRRHGSE-SRSRDHRREDRVHYRSPPLATGYRYGHSKSPHFREKSPVRE 137
Query: 212 P--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAI 268
P PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 138 PVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGI---- 193
Query: 269 MMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDV 328
++F + V + L G
Sbjct: 194 -----------------AYVEFCEIQSVPLAIGLTG------------------------ 212
Query: 329 MSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLH 386
Q LLG P++V+ S+AEKN +N G GP +LYVG+LH
Sbjct: 213 -----------QRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVGSLH 255
Query: 387 FNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIV 446
FN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A + L ++
Sbjct: 256 FNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRACGTVEWGLSLL 315
Query: 447 GRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGS 505
GR ++V VT+ + G D D + D G +A R LM KL A
Sbjct: 316 GRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQLMAKL-----AEGAGIQ 365
Query: 506 LGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDP 565
L A +A QA +L + G AVP+ A+ P + + S+C L ++F P
Sbjct: 366 LPSTAAAAAAAAAAQAAALQLNG--AVPLGALN-PAALTALSPALNLASQCFQLSSLFTP 422
>gi|300123623|emb|CBK24895.2| unnamed protein product [Blastocystis hominis]
Length = 465
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 187/428 (43%), Gaps = 86/428 (20%)
Query: 218 RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTL 277
RD RTVF + +K E+ + +F +AG V+ ++LI DR S RSKG+G
Sbjct: 106 RDIRTVFVSDLQVKVDEKWLRHYFEQAGTVKSIKLIRDRYSNRSKGMG------------ 153
Query: 278 HSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIAL 337
I+ + L G + T A
Sbjct: 154 ---------YIEMATQEDAAKALMLNGQKMCTKHK---------------------ACNC 183
Query: 338 SGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKL 397
SG P+ VK SEAEKN A P + V NLH +T L +L
Sbjct: 184 SG-----FPMKVKRSEAEKNWSAMKERA------PPKIQPSTIRVCNLHPQLTRPNLIEL 232
Query: 398 FEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTD 457
FE FG V+ V + LD E Q KG ++F + E A A + ++G++ R L V +
Sbjct: 233 FEAFGDVDNVTMDLD-EHKQFKGSANIKFRRPESASRAATRMDGQV-YFDRKLSVQLLQ- 289
Query: 458 HVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAV 517
+ ++ ++D + + L+ R+L+M+ + ++ ++ + V
Sbjct: 290 ------RSGRNWKYEDRE-DNIILDPSRRSLMMRHIAENKNDPTLLDTM--------NQV 334
Query: 518 NQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEI 577
N + GQ A P A P I G+ S CL+L NMF+ A+E P +D++I
Sbjct: 335 NNR-------GQIANPAGAAK-PTIE-------GNASNCLVLHNMFNSAIEQGPHWDIDI 379
Query: 578 QGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMK 637
Q DV EC KYG + H +VDK S+G VYL F++ + +A M+ RW+ R++ +M
Sbjct: 380 QEDVRTECQKYGAILHCFVDKNSSGDVYLMFDNMNSCQNAANDMNGRWYDGRVVQVSYMP 439
Query: 638 PEDYEAKF 645
+Y +F
Sbjct: 440 SGEYVNRF 447
>gi|349604477|gb|AEQ00017.1| RNA-binding protein 39-like protein, partial [Equus caballus]
Length = 374
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/198 (43%), Positives = 120/198 (60%), Gaps = 23/198 (11%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 379
Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP +
Sbjct: 181 YVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM-----R 234
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A L
Sbjct: 235 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 294
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DRT 496
NG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L + T
Sbjct: 295 NG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGT 350
Query: 497 GI--------ATSIAGSL 506
G+ A ++GSL
Sbjct: 351 GLQIPPAAQQALQMSGSL 368
>gi|395503034|ref|XP_003755878.1| PREDICTED: probable RNA-binding protein 23 [Sarcophilus harrisii]
Length = 451
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 127/378 (33%), Positives = 177/378 (46%), Gaps = 93/378 (24%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S Y+EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 153 KSPHYREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 212
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 213 RNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG----------- 240
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
Q LLG P++V+ S+AEKN +N G+ GP
Sbjct: 241 ------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKGSG-GPM 275
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KGFGF+ F+ E A+
Sbjct: 276 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDPDTGRSKGFGFLTFSDSECAR 330
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A LNG E+ GR ++V VT+ + G D + D G A R LM K
Sbjct: 331 RALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGGEELDLG-----TAGGRLQLMAK 384
Query: 493 L-DRTGI--ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIP--NMAA 547
L + +GI T+ A + A +NG AV A++ PA + P N+A+
Sbjct: 385 LAEGSGIQLPTTAAAAQAAALQLNG-AVPLGALN-----------PAALTALSPALNLAS 432
Query: 548 EFIGSPSECLLLKNMFDP 565
+ I S+C L ++F P
Sbjct: 433 QAIA--SQCFQLSSLFTP 448
>gi|126277396|ref|XP_001369125.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Monodelphis
domestica]
Length = 449
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 127/378 (33%), Positives = 177/378 (46%), Gaps = 93/378 (24%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S Y+EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 151 KSPHYREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 210
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 211 RNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG----------- 238
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
Q LLG P++V+ S+AEKN +N G+ GP
Sbjct: 239 ------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKGSG-GPM 273
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KGFGF+ F+ E A+
Sbjct: 274 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDPDTGRSKGFGFLTFSDSECAR 328
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A LNG E+ GR ++V VT+ + G D + D G A R LM K
Sbjct: 329 RALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGGEELDLG-----TAGGRLQLMAK 382
Query: 493 L-DRTGI--ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIP--NMAA 547
L + +GI T+ A + A +NG AV A++ PA + P N+A+
Sbjct: 383 LAEGSGIQLPTTAAAAQAAALQLNG-AVPLGALN-----------PAALTALSPALNLAS 430
Query: 548 EFIGSPSECLLLKNMFDP 565
+ I S+C L ++F P
Sbjct: 431 QAIA--SQCFQLSSLFTP 446
>gi|383419607|gb|AFH33017.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
Length = 441
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 120/374 (32%), Positives = 171/374 (45%), Gaps = 83/374 (22%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 141 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 200
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 201 RNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG----------- 228
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
Q LLG P++V+ S+AEKN +N G+ GP
Sbjct: 229 ------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKGSG-GPM 263
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+
Sbjct: 264 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECAR 318
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A LNG E+ GR ++V VT+ + G D D + D G +A R LM K
Sbjct: 319 RALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDPG-----SAGGRLQLMAK 372
Query: 493 L-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIG 551
L + +GI + A A A Q AVP+ A+ + ++ +
Sbjct: 373 LAEGSGIQLPTTAAAAAAAAAAAHAAALQL-------NGAVPLGALNPAALTALSPA-LN 424
Query: 552 SPSECLLLKNMFDP 565
S+C L ++F P
Sbjct: 425 LASQCFQLSSLFTP 438
>gi|388490330|ref|NP_001253303.1| probable RNA-binding protein 23 [Macaca mulatta]
gi|380814244|gb|AFE78996.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
gi|384947950|gb|AFI37580.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
Length = 441
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 120/374 (32%), Positives = 171/374 (45%), Gaps = 83/374 (22%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 141 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 200
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 201 RNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG----------- 228
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
Q LLG P++V+ S+AEKN +N G+ GP
Sbjct: 229 ------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKGSG-GPM 263
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+
Sbjct: 264 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECAR 318
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A LNG E+ GR ++V VT+ + G D D + D G +A R LM K
Sbjct: 319 RALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDPG-----SAGGRLQLMAK 372
Query: 493 L-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIG 551
L + +GI + A A A Q AVP+ A+ + ++ +
Sbjct: 373 LAEGSGIQLPTTAAAAAAAAAAAHAAALQL-------NGAVPLGALNPAALTALSPA-LN 424
Query: 552 SPSECLLLKNMFDP 565
S+C L ++F P
Sbjct: 425 LASQCFQLSSLFTP 438
>gi|355693134|gb|EHH27737.1| hypothetical protein EGK_18008 [Macaca mulatta]
Length = 441
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 120/374 (32%), Positives = 171/374 (45%), Gaps = 83/374 (22%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 141 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 200
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 201 RNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG----------- 228
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
Q LLG P++V+ S+AEKN +N G+ GP
Sbjct: 229 ------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKGSG-GPM 263
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+
Sbjct: 264 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECAR 318
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A LNG E+ GR ++V VT+ + G D D + D G +A R LM K
Sbjct: 319 RALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDPG-----SAGGRLQLMAK 372
Query: 493 L-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIG 551
L + +GI + A A A Q AVP+ A+ + ++ +
Sbjct: 373 LAEGSGIQLPTTAAAAAAAAAAAHAAALQL-------NGAVPLGALNPAALTALSPA-LN 424
Query: 552 SPSECLLLKNMFDP 565
S+C L ++F P
Sbjct: 425 LASQCFQLSSLFTP 438
>gi|308473560|ref|XP_003099004.1| hypothetical protein CRE_26746 [Caenorhabditis remanei]
gi|308267807|gb|EFP11760.1| hypothetical protein CRE_26746 [Caenorhabditis remanei]
Length = 651
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 168/339 (49%), Gaps = 53/339 (15%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAG-------GTATGPYG 374
Y+EF+D SVP+ +AL+GQ L+G P+ ++ + AE+N +++ A G A GP
Sbjct: 286 YVEFWDEESVPLGLALNGQRLMGAPLQIQRTCAERNRAANSSMASTLGFVAPGAAKGP-- 343
Query: 375 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 434
+ V NLH +TE +R++FE FG +E +++ + G + + F + A+
Sbjct: 344 ---AHVLVENLHPKITENMIREIFESFGRIEKLEME-KLSNGDNRETAVIVFRNADEAQK 399
Query: 435 AQSALNGKLEIVGRTLKVSSVTD-----HVGTQDTAAKSADFDD-DDGGGLALNAQSRAL 488
+ LN E+ GR +++S D + ++ + DD D G +L A R
Sbjct: 400 SIEQLN-NFELAGRQIRLSIKQDAPPPPQIKKEEASIHQRSLDDVGDRQGFSLGAGGRQQ 458
Query: 489 LMQKLDR-TGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAA 547
LM KL + TG + S +A G N Q IP++A
Sbjct: 459 LMAKLAQGTGSGMELTASAQMAAQHAG---NSQ---------------------IPSIA- 493
Query: 548 EFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYL 606
++C LL NMFDP+ ET+P +D +I+ DV E+C+++G H++VDK S G VY+
Sbjct: 494 ------TQCFLLSNMFDPSKETEPAWDHDIREDVIEQCAQHGGALHVFVDKGSEQGNVYV 547
Query: 607 RFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+ S A A A+H RWF+ ++I+A ++ Y F
Sbjct: 548 KCPSIAIAHQAVSALHGRWFSGKVITANYVPVNSYHDLF 586
>gi|301781268|ref|XP_002926045.1| PREDICTED: probable RNA-binding protein 23-like isoform 1
[Ailuropoda melanoleuca]
Length = 446
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 122/381 (32%), Positives = 176/381 (46%), Gaps = 94/381 (24%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 143 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 202
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 203 RNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG----------- 230
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN---LVQSNTSAGGTATGP 372
Q LLG P++V+ S+AEKN + +N G ++GP
Sbjct: 231 ------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKG--SSGP 264
Query: 373 YGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHA 432
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A
Sbjct: 265 M-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECA 319
Query: 433 KAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQ 491
+ A LNG E+ GR ++V VT+ + G D D + D G +A R LM
Sbjct: 320 RRALEQLNG-FELAGRPMRVGQVTERLDGGIDITFPDGDQELDLG-----SAGGRLQLMA 373
Query: 492 KL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPV----PAVTAPVIP--N 544
KL + +GI P +A + + VP+ PA + P N
Sbjct: 374 KLAEGSGIQL---------PTTAAAAAAAAQAAAALQLNGTVPLGALNPAALTALSPALN 424
Query: 545 MAAEFIGSPSECLLLKNMFDP 565
+A++ I S+C L ++F P
Sbjct: 425 LASQAIA--SQCFQLSSLFTP 443
>gi|410961880|ref|XP_003987506.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Felis catus]
Length = 445
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 122/379 (32%), Positives = 172/379 (45%), Gaps = 90/379 (23%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 142 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 201
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 202 RNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG----------- 229
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
Q LLG P++V+ S+AEKN +N G+ GP
Sbjct: 230 ------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKGSG-GPM 264
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+
Sbjct: 265 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECAR 319
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A LNG E+ GR ++V VT+ + G D D + D G +A R LM K
Sbjct: 320 RALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRLQLMAK 373
Query: 493 LDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPV----PAVTAPVIP--NMA 546
L GS P +A + + VP+ PA + P N+A
Sbjct: 374 LAE--------GSGMQLPTTTAAAAAAAQAAAALQLNGTVPLGALNPAALTALSPALNLA 425
Query: 547 AEFIGSPSECLLLKNMFDP 565
++ I S+C L ++F P
Sbjct: 426 SQAIA--SQCFQLSSLFTP 442
>gi|119586630|gb|EAW66226.1| RNA binding motif protein 23, isoform CRA_e [Homo sapiens]
Length = 449
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 182/409 (44%), Gaps = 90/409 (22%)
Query: 161 RSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQ 220
R R R R +R E R R+ RE R R + E + + PE ERD
Sbjct: 124 RQCRHRSRSWDRRHGSE-SRSRDHRREDRVHYRSPPLATG----EPVDNLSPE---ERDA 175
Query: 221 RTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSC 280
RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 176 RTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIA--------------- 220
Query: 281 LINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQ 340
++F + V + L +GQ
Sbjct: 221 ------YVEFCEIQSVPLAIGL-----------------------------------TGQ 239
Query: 341 LLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLF 398
LLG P++V+ S+AEKN +N G GP +LYVG+LHFN+TE LR +F
Sbjct: 240 RLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVGSLHFNITEDMLRGIF 293
Query: 399 EPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDH 458
EPFG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG E+ GR ++V VT+
Sbjct: 294 EPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVGHVTER 352
Query: 459 V-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIAGSLGVAPAVNGSA 516
+ G D D + D G +A R LM KL + GI P+ +A
Sbjct: 353 LDGGTDITFPDGDQELDLG-----SAGGRFQLMAKLAEGAGIQL---------PSTAAAA 398
Query: 517 VNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDP 565
A + + AVP+ A+ + ++ + S+C L ++F P
Sbjct: 399 AAAAAQAAALQLNGAVPLGALNPAALTALSPA-LNLASQCFQLSSLFTP 446
>gi|384947948|gb|AFI37579.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
Length = 425
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 144/301 (47%), Gaps = 74/301 (24%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 125 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 184
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 185 RNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG----------- 212
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
Q LLG P++V+ S+AEKN +N G+ GP
Sbjct: 213 ------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKGSG-GPM 247
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+
Sbjct: 248 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECAR 302
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A LNG E+ GR ++V VT+ + G D D + D G +A R LM K
Sbjct: 303 RALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDPG-----SAGGRLQLMAK 356
Query: 493 L 493
L
Sbjct: 357 L 357
>gi|380814242|gb|AFE78995.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
gi|383419605|gb|AFH33016.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
Length = 425
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 144/301 (47%), Gaps = 74/301 (24%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 125 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 184
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 185 RNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG----------- 212
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
Q LLG P++V+ S+AEKN +N G+ GP
Sbjct: 213 ------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKGSG-GPM 247
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+
Sbjct: 248 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECAR 302
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A LNG E+ GR ++V VT+ + G D D + D G +A R LM K
Sbjct: 303 RALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDPG-----SAGGRLQLMAK 356
Query: 493 L 493
L
Sbjct: 357 L 357
>gi|126277398|ref|XP_001369153.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Monodelphis
domestica]
Length = 433
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 127/378 (33%), Positives = 177/378 (46%), Gaps = 93/378 (24%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S Y+EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 135 KSPHYREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 194
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 195 RNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG----------- 222
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
Q LLG P++V+ S+AEKN +N G+ GP
Sbjct: 223 ------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKGSG-GPM 257
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KGFGF+ F+ E A+
Sbjct: 258 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDPDTGRSKGFGFLTFSDSECAR 312
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A LNG E+ GR ++V VT+ + G D + D G A R LM K
Sbjct: 313 RALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGGEELDLG-----TAGGRLQLMAK 366
Query: 493 L-DRTGI--ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIP--NMAA 547
L + +GI T+ A + A +NG AV A++ PA + P N+A+
Sbjct: 367 LAEGSGIQLPTTAAAAQAAALQLNG-AVPLGALN-----------PAALTALSPALNLAS 414
Query: 548 EFIGSPSECLLLKNMFDP 565
+ I S+C L ++F P
Sbjct: 415 QAIA--SQCFQLSSLFTP 430
>gi|444728803|gb|ELW69245.1| putative RNA-binding protein 23 [Tupaia chinensis]
Length = 450
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 113/345 (32%), Positives = 157/345 (45%), Gaps = 87/345 (25%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 129 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 188
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 189 RNSRRSKGIA---------------------YVEFCEIQSVPLAIGLTG----------- 216
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
Q LLG P++V+ S+AEKN +N G+ GP
Sbjct: 217 ------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKGSG-GPM 251
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+
Sbjct: 252 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECAR 306
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A LNG E+ GR ++V VT+ G+ D D + D G +A R LM K
Sbjct: 307 RALEQLNG-FELAGRPMRVGHVTERADGSTDITFPDGDQELDLG-----SAGGRLQLMAK 360
Query: 493 LDRTGIATSIAGSLGVAPAVN--GSAVNQQAISLPVVGQPAVPVP 535
L ++PA+N A+ Q L + P P
Sbjct: 361 LAEA-----------LSPALNLASQAIASQCFQLSSLFTPQTIHP 394
>gi|355778434|gb|EHH63470.1| hypothetical protein EGM_16442, partial [Macaca fascicularis]
Length = 366
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 118/351 (33%), Positives = 159/351 (45%), Gaps = 90/351 (25%)
Query: 149 RRSSSQSRRSSSRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKE 208
RR SS+ R SR RR +R S R L + S ++EK
Sbjct: 32 RRHSSELR---SRDRRHEDRVSYRSPPLAAGYRYGHSK-------------SPHFREKSP 75
Query: 209 VVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG 265
V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 76 VREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGI- 134
Query: 266 NAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEF 325
++F + V + L G
Sbjct: 135 --------------------AYVEFCEIQSVPLAIGLTG--------------------- 153
Query: 326 YDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVG 383
Q LLG P++V+ S+AEKN +N G+ GP +LYVG
Sbjct: 154 --------------QRLLGVPIIVQASQAEKNRLAAMANNLQKGSG-GPM-----RLYVG 193
Query: 384 NLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKL 443
+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG
Sbjct: 194 SLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-F 252
Query: 444 EIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL 493
E+ GR ++V VT+ + G D D + D G +A R LM KL
Sbjct: 253 ELAGRPMRVGHVTERLDGGTDITFPDGDQELDPG-----SAGGRLQLMAKL 298
>gi|73962357|ref|XP_537365.2| PREDICTED: probable RNA-binding protein 23 isoform 1 [Canis lupus
familiaris]
Length = 445
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 120/375 (32%), Positives = 180/375 (48%), Gaps = 82/375 (21%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 142 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 201
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 202 RNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG----------- 229
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN---LVQSNTSAGGTATGP 372
Q LLG P++V+ S+AEKN + +N G ++GP
Sbjct: 230 ------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKG--SSGP 263
Query: 373 YGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHA 432
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A
Sbjct: 264 M-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECA 318
Query: 433 KAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQ 491
+ A LNG E+ GR ++V VT+ + G D + + D G +A R LM
Sbjct: 319 RRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGEQELDLG-----SAGGRLQLMA 372
Query: 492 KL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFI 550
KL + +GI + A A +A+ ++P+ G + A++ + N+A++ I
Sbjct: 373 KLAEGSGIQLPTTAAAAAAAAQAAAALQLNG-TVPLGGLNPAALTALSPAL--NLASQAI 429
Query: 551 GSPSECLLLKNMFDP 565
S+C L ++F P
Sbjct: 430 A--SQCFQLSSLFTP 442
>gi|116734698|ref|NP_001070820.1| probable RNA-binding protein 23 isoform 3 [Homo sapiens]
gi|119586628|gb|EAW66224.1| RNA binding motif protein 23, isoform CRA_c [Homo sapiens]
Length = 405
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 127/410 (30%), Positives = 181/410 (44%), Gaps = 90/410 (21%)
Query: 160 SRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERD 219
R R R R +R E R R+ RE R R + E + + PE ERD
Sbjct: 79 GRQCRHRSRSWDRRHGSE-SRSRDHRREDRVHYRSPPLATG----EPVDNLSPE---ERD 130
Query: 220 QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHS 279
RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 131 ARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGI--------------- 175
Query: 280 CLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSG 339
++F + V + L G
Sbjct: 176 ------AYVEFCEIQSVPLAIGLTG----------------------------------- 194
Query: 340 QLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKL 397
Q LLG P++V+ S+AEKN +N G GP +LYVG+LHFN+TE LR +
Sbjct: 195 QRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVGSLHFNITEDMLRGI 248
Query: 398 FEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTD 457
FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG E+ GR ++V VT+
Sbjct: 249 FEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVGHVTE 307
Query: 458 HV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIAGSLGVAPAVNGS 515
+ G D D + D G +A R LM KL + GI P+ +
Sbjct: 308 RLDGGTDITFPDGDQELDLG-----SAGGRFQLMAKLAEGAGIQL---------PSTAAA 353
Query: 516 AVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDP 565
A A + + AVP+ A+ + ++ + S+C L ++F P
Sbjct: 354 AAAAAAQAAALQLNGAVPLGALNPAALTALSPA-LNLASQCFQLSSLFTP 402
>gi|426376372|ref|XP_004054975.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Gorilla
gorilla gorilla]
Length = 437
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 118/374 (31%), Positives = 168/374 (44%), Gaps = 87/374 (23%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 141 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 200
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 201 RNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG----------- 228
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
Q LLG P++V+ S+AEKN +N G GP
Sbjct: 229 ------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM 263
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+
Sbjct: 264 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECAR 318
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A LNG E+ GR ++V VT+ + G D D + D G +A R LM K
Sbjct: 319 RALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRLQLMAK 372
Query: 493 L-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIG 551
L + GI + A +N AVP+ A+ + ++ +
Sbjct: 373 LAEGAGIQLPTTATAAAAAQAAALQLNG-----------AVPLGALNPAALTALSPA-LN 420
Query: 552 SPSECLLLKNMFDP 565
S+C L ++F P
Sbjct: 421 LASQCFQLSSLFTP 434
>gi|261858408|dbj|BAI45726.1| RNA binding motif protein 23 [synthetic construct]
Length = 406
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 132/409 (32%), Positives = 182/409 (44%), Gaps = 87/409 (21%)
Query: 160 SRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERD 219
R R R R +R E R R+ RE R R + E + + PE ERD
Sbjct: 79 GRQCRHRSRSWDRRHGSE-SRSRDHRREDRVHYRSPPLATG----EPVDNLSPE---ERD 130
Query: 220 QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHS 279
RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 131 ARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGI--------------- 175
Query: 280 CLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSG 339
++F + V + L G
Sbjct: 176 ------AYVEFCEIQSVPLAIGLTG----------------------------------- 194
Query: 340 QLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKL 397
Q LLG P++V+ S+AEKN +N G GP +LYVG+LHFN+TE LR +
Sbjct: 195 QRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVGSLHFNITEDMLRGI 248
Query: 398 FEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTD 457
FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG E+ GR ++V VT+
Sbjct: 249 FEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVGHVTE 307
Query: 458 HV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSA 516
+ G D D + D G +A R LM KL A L A +A
Sbjct: 308 RLDGGTDITFPDGDQELDLG-----SAGGRFQLMAKL-----AEGAGIQLPSTAAAAAAA 357
Query: 517 VNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDP 565
QA +L + G AVP+ A+ P + + S+CL L ++F P
Sbjct: 358 AAAQAAALQLNG--AVPLGALN-PAALTALSPALNLASQCLQLSSLFTP 403
>gi|197102126|ref|NP_001124751.1| probable RNA-binding protein 23 [Pongo abelii]
gi|55725769|emb|CAH89665.1| hypothetical protein [Pongo abelii]
Length = 423
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/374 (32%), Positives = 172/374 (45%), Gaps = 85/374 (22%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S +KEK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 125 KSPHFKEKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 184
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 185 RNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG----------- 212
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
Q LLG P++V+ S+AEKN +N G+ GP
Sbjct: 213 ------------------------QRLLGVPIIVQASQAEKNRPAAMANNLQKGSG-GPM 247
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+
Sbjct: 248 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECAR 302
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A LNG E+ GR ++V VT+ + G D D + D G +A R LM K
Sbjct: 303 RALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRLQLMAK 356
Query: 493 L-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIG 551
L + +GI P +A A + + AVP+ A+ + ++ +
Sbjct: 357 LAEGSGIQL---------PTTAAAAAAAAAQAAALQLNGAVPLGALNPAALTALSPA-LN 406
Query: 552 SPSECLLLKNMFDP 565
S+C L ++F P
Sbjct: 407 LASQCFQLSSLFTP 420
>gi|332222976|ref|XP_003260645.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Nomascus
leucogenys]
Length = 442
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 144/301 (47%), Gaps = 74/301 (24%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 141 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 200
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 201 RNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG----------- 228
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
Q LLG P++V+ S+AEKN +N G+ GP
Sbjct: 229 ------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKGSG-GPM 263
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+
Sbjct: 264 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECAR 318
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A LNG E+ GR ++V VT+ + G D D + D G +A R LM K
Sbjct: 319 RALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRLQLMAK 372
Query: 493 L 493
L
Sbjct: 373 L 373
>gi|330920965|ref|XP_003299224.1| hypothetical protein PTT_10174 [Pyrenophora teres f. teres 0-1]
gi|311327182|gb|EFQ92678.1| hypothetical protein PTT_10174 [Pyrenophora teres f. teres 0-1]
Length = 570
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 133/490 (27%), Positives = 205/490 (41%), Gaps = 123/490 (25%)
Query: 199 ESRRYKEKKEVVEPEA-DPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRN 257
E R + + EPE + +RD+RT+F Q+ +A + FF + G V + +++ DR
Sbjct: 154 ERRTTRRPQTPAEPEVTEDDRDKRTIFVQQISQRAETHHLRTFFERVGPVIEAQIVKDR- 212
Query: 258 SRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVL 317
+ +R G VG
Sbjct: 213 ----------VTLRSKG---------------------VG-------------------- 221
Query: 318 VSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID 377
Y+EF D SV A+ L+GQ L G P++ + +EAEKN + G
Sbjct: 222 ----YVEFKDEESVAKALELTGQKLKGVPIIAQLAEAEKNRAARPSEGGAAPGANGAPFH 277
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLD-IETGQCKGFGFVQFAQLEHAKAAQ 436
R LYVGN+HF++TE LR +FEPFG +E V L D G+ KG+GFVQF HAK A
Sbjct: 278 R-LYVGNIHFSVTEGDLRDIFEPFGALEQVILQRDEANPGRSKGYGFVQFVDPAHAKNAL 336
Query: 437 SALNGKLEIVGRTLKVSSVTDHVGTQDTA-----------------------------AK 467
+ +NG E+ GR ++V D + TA
Sbjct: 337 AEMNG-FELAGRQIRVGLGNDKFTPESTANLLRTFSQQAQSYQGSAFSGAGGRGAYAGGS 395
Query: 468 SADFD-----DDDG--GGLALNAQSRALLMQK-LDRTGIATSIAGSLGVAPAVNGSAVNQ 519
+FD DD G G AL+ A + K DR+ + ++A PA
Sbjct: 396 GGNFDRTHAKDDRGVSGASALDDTDVAGVNYKTYDRSKLMDALARRDNGEPARGAQ---- 451
Query: 520 QAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAME---TDPDFDLE 576
PV+ +P P+ V P+ S+C+ ++N FD E ++ E
Sbjct: 452 -----PVINKPRAPI--VDKPMA-----------SKCVKIENAFDADEEQRMIGNNWVKE 493
Query: 577 IQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIF 635
++ +V+ EC KYG+V HI VD S G ++++F+S A + ++ R F R I A +
Sbjct: 494 LEVEVKAECEKKYGKVVHIAVDTNSDGEIFVKFDSVTGGEKALQGLNGRSFNNRRIRASY 553
Query: 636 MKPEDYEAKF 645
+ + Y + +
Sbjct: 554 VVDKIYNSLW 563
>gi|397473311|ref|XP_003808158.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Pan paniscus]
Length = 426
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 143/301 (47%), Gaps = 74/301 (24%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 125 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 184
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 185 RNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG----------- 212
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
Q LLG P++V+ S+AEKN +N G GP
Sbjct: 213 ------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM 247
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+
Sbjct: 248 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECAR 302
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A LNG E+ GR ++V VT+ + G D D + D G +A R LM K
Sbjct: 303 RALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQLMAK 356
Query: 493 L 493
L
Sbjct: 357 L 357
>gi|410218752|gb|JAA06595.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410307724|gb|JAA32462.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410307728|gb|JAA32464.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 442
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 142/301 (47%), Gaps = 74/301 (24%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 141 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 200
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 201 RNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG----------- 228
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
Q LLG P++V+ S+AEKN +N G GP
Sbjct: 229 ------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM 263
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG KG+GF+ F+ E A+
Sbjct: 264 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECAR 318
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A LNG E+ GR ++V VT+ + G D D + D G +A R LM K
Sbjct: 319 RALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQLMAK 372
Query: 493 L 493
L
Sbjct: 373 L 373
>gi|10880789|gb|AAG24388.1|AF275678_1 PP239 protein [Homo sapiens]
Length = 418
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 122/359 (33%), Positives = 163/359 (45%), Gaps = 83/359 (23%)
Query: 141 ERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELRERERDLEMRES 200
E + S RS S RR S SR R+ RE +R R L R +S
Sbjct: 70 EVQVGSVVTRSRSWDRRHGSESR---SRDHRRE-----DRVHYRSPPLTTGYR-YGHSKS 120
Query: 201 RRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRN 257
++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I DRN
Sbjct: 121 PHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRN 180
Query: 258 SRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVL 317
SRRSKG+ ++F + V + L G
Sbjct: 181 SRRSKGI---------------------AYVEFCEIQSVPLAIGLTG------------- 206
Query: 318 VSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGA 375
Q LLG P++V+ S+AEKN +N G GP
Sbjct: 207 ----------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-- 241
Query: 376 IDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAA 435
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A
Sbjct: 242 ---RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRA 298
Query: 436 QSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL 493
LNG E+ GR ++V VT+ + G D D + D G +A R LM KL
Sbjct: 299 LEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQLMAKL 351
>gi|328859425|gb|EGG08534.1| hypothetical protein MELLADRAFT_84729 [Melampsora larici-populina
98AG31]
Length = 649
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 138/498 (27%), Positives = 202/498 (40%), Gaps = 167/498 (33%)
Query: 183 ERER-------ELRERERDLEMR----------------------ESRRYKEKKEVVEPE 213
ERER ++R RD R ++ RY+ ++ P
Sbjct: 230 ERERYRKRHRSRSKDRSRDRSHRPDDPIDDREIERRRRYEEAEGEDNPRYRPYEQTASPT 289
Query: 214 A---------DPERDQRTVFAYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKG 263
A + E + R+VF Q+ + +R++ +FF +AGKVRD R+I DR SRRSKG
Sbjct: 290 ARRSSSPHLTEEEHEMRSVFVSQLSARVGDRELSQFFEQQAGKVRDARVITDRISRRSKG 349
Query: 264 VGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYI 323
VG ++F + V L G +
Sbjct: 350 VG---------------------YVEFRELDSVQKALALTGTK----------------- 371
Query: 324 EFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEK------NLVQSNTSAGGTATGPYGAID 377
LLG PVMV+ +EAEK N +N +AG P +
Sbjct: 372 ------------------LLGLPVMVQYTEAEKNRQAMANTQPNNVAAGLVTVAPPPPVQ 413
Query: 378 R-------------------KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQC 418
R +LYVG+L+FN+T+ LR++F+PFG +E V L D TG+
Sbjct: 414 RSYVAPKPRGPGPNDPNSYARLYVGSLNFNLTDDDLRQVFQPFGDIEYVDLHRDQITGKS 473
Query: 419 KGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGG 478
KG+ FVQF + AK A +NG ++ GR L+V + Q AA
Sbjct: 474 KGYAFVQFKNMHDAKNAMEKMNG-FQLAGRALRVE-----IKAQPPAA------------ 515
Query: 479 LALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVN---------GSAVNQQA-----ISL 524
LNA + ++ I T G+ + + + GS +NQ + L
Sbjct: 516 -LLNATAPGVI-----NPVIVTPTGGNFAMTNSNSFEERLEEPVGSGMNQISRVELMHKL 569
Query: 525 PVVGQPA-VPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEE 583
QP VPV + P IP S +LLKNMF+P ET+ +D+E++ DV+
Sbjct: 570 ARTEQPTNVPVTDMFRPNIPTAT-------SRSVLLKNMFNPEEETERGWDMELRDDVKG 622
Query: 584 EC-SKYGRVKHIYVDKRS 600
EC KYG V I ++ S
Sbjct: 623 ECEEKYGPVLAIAIETES 640
>gi|7022544|dbj|BAA91638.1| unnamed protein product [Homo sapiens]
Length = 406
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 130/409 (31%), Positives = 182/409 (44%), Gaps = 87/409 (21%)
Query: 160 SRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERD 219
R R R R +R E R R+ RE R R + E + + PE ERD
Sbjct: 79 GRQCRHRSRSWDRRHGSE-SRSRDHRREDRVHYRSPPLTTG----EPVDNLSPE---ERD 130
Query: 220 QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHS 279
RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 131 ARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGI--------------- 175
Query: 280 CLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSG 339
++F + V + L G
Sbjct: 176 ------AYVEFCEIQSVPLAIGLTG----------------------------------- 194
Query: 340 QLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKL 397
Q LLG P++V+ S+AEKN +N G GP +LYVG+LHFN+TE LR +
Sbjct: 195 QRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVGSLHFNITEDMLRGI 248
Query: 398 FEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTD 457
FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG E+ GR ++V VT+
Sbjct: 249 FEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVGHVTE 307
Query: 458 HV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSA 516
+ G D D + D G +A R LM KL A L A +A
Sbjct: 308 RLDGGTDITFPDGDQELDLG-----SAGGRFQLMAKL-----AEGAGIQLPSTAAAAAAA 357
Query: 517 VNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDP 565
QA +L + G AVP+ A+ + ++ + S+C L ++F P
Sbjct: 358 AAAQAAALQLNG--AVPLGALNPAALTALSPA-LNLASQCFQLSSLFTP 403
>gi|405120919|gb|AFR95689.1| RNA splicing factor Pad-1 [Cryptococcus neoformans var. grubii H99]
Length = 588
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 179/370 (48%), Gaps = 79/370 (21%)
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN-----LVQSNTSA----- 365
VL Y+E V V A+ALSG +++G P+ + +EAE+N L+ + A
Sbjct: 258 VLGLIGYVELDSVDLVNKALALSGTVVMGIPINIMLTEAERNHSGTELITATALASNARS 317
Query: 366 ---GGTATGPY------------------------GAID-RKLYVGNLHFNMTETQLRKL 397
GG ++ P+ AI +L+V NL F++T +R++
Sbjct: 318 HGGGGRSSVPFTQNYPPLSTGLDLPPGLDPDAHKDAAIPYHRLFVSNLAFSLTADDVRQV 377
Query: 398 FEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTD 457
FEPFG +E V L +D+ +G KG +VQF ++ A+ A A+ G ++ GR +KV ++ +
Sbjct: 378 FEPFGEIEFVDLHMDL-SGLRKGTAYVQFKDVKSAQMALDAMAG-FDLAGRLIKVQTIQE 435
Query: 458 HVGTQDTAAKSADFDDDDGG-GLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSA 516
GT T D +D G G L+A R LM KL RT P VN S
Sbjct: 436 R-GTYQTP----DLIEDSGNYGTRLDANQRQQLMFKLART------------EPNVNLS- 477
Query: 517 VNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLE 576
+S P + VPA+ P+ +++ NMF+P ET+ ++DL+
Sbjct: 478 -----LSAPRINDSQSKVPAM--------------DPTPRIVVHNMFNPEEETERNWDLD 518
Query: 577 IQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIF 635
+ DV+ E SKYGRVK I V+K SAG VY+ F T++A A + ++ R+F R + A +
Sbjct: 519 LAEDVKGEVESKYGRVKRIKVEKMSAGEVYIEFIDTDSAIKAVKGLNGRFFGGRQLQAGY 578
Query: 636 MKPEDYEAKF 645
+ + A
Sbjct: 579 ITEALFNAHL 588
>gi|426376370|ref|XP_004054974.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Gorilla
gorilla gorilla]
Length = 421
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 143/301 (47%), Gaps = 74/301 (24%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 125 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 184
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 185 RNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG----------- 212
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
Q LLG P++V+ S+AEKN +N G GP
Sbjct: 213 ------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM 247
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+
Sbjct: 248 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECAR 302
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A LNG E+ GR ++V VT+ + G D D + D G +A R LM K
Sbjct: 303 RALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRLQLMAK 356
Query: 493 L 493
L
Sbjct: 357 L 357
>gi|332222974|ref|XP_003260644.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Nomascus
leucogenys]
Length = 426
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 144/301 (47%), Gaps = 74/301 (24%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 125 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 184
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 185 RNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG----------- 212
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
Q LLG P++V+ S+AEKN +N G+ GP
Sbjct: 213 ------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKGSG-GPM 247
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+
Sbjct: 248 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECAR 302
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A LNG E+ GR ++V VT+ + G D D + D G +A R LM K
Sbjct: 303 RALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRLQLMAK 356
Query: 493 L 493
L
Sbjct: 357 L 357
>gi|73962355|ref|XP_848788.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Canis lupus
familiaris]
Length = 429
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 120/375 (32%), Positives = 180/375 (48%), Gaps = 82/375 (21%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 126 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 185
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 186 RNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG----------- 213
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN---LVQSNTSAGGTATGP 372
Q LLG P++V+ S+AEKN + +N G ++GP
Sbjct: 214 ------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKG--SSGP 247
Query: 373 YGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHA 432
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A
Sbjct: 248 M-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECA 302
Query: 433 KAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQ 491
+ A LNG E+ GR ++V VT+ + G D + + D G +A R LM
Sbjct: 303 RRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGEQELDLG-----SAGGRLQLMA 356
Query: 492 KL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFI 550
KL + +GI + A A +A+ ++P+ G + A++ + N+A++ I
Sbjct: 357 KLAEGSGIQLPTTAAAAAAAAQAAAALQLNG-TVPLGGLNPAALTALSPAL--NLASQAI 413
Query: 551 GSPSECLLLKNMFDP 565
S+C L ++F P
Sbjct: 414 A--SQCFQLSSLFTP 426
>gi|410218750|gb|JAA06594.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410307726|gb|JAA32463.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 426
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 142/301 (47%), Gaps = 74/301 (24%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 125 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 184
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 185 RNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG----------- 212
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
Q LLG P++V+ S+AEKN +N G GP
Sbjct: 213 ------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM 247
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG KG+GF+ F+ E A+
Sbjct: 248 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECAR 302
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A LNG E+ GR ++V VT+ + G D D + D G +A R LM K
Sbjct: 303 RALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQLMAK 356
Query: 493 L 493
L
Sbjct: 357 L 357
>gi|396488840|ref|XP_003842956.1| hypothetical protein LEMA_P087160.1 [Leptosphaeria maculans JN3]
gi|312219534|emb|CBX99477.1| hypothetical protein LEMA_P087160.1 [Leptosphaeria maculans JN3]
Length = 590
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 180/383 (46%), Gaps = 83/383 (21%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF + SVP A+ L+GQ L G P++ + +EAEKN + G R LY
Sbjct: 225 YVEFKEEESVPKALELTGQKLKGVPIIAQLTEAEKNRAARPSEGGAAPGANGAPFHR-LY 283
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLD-IETGQCKGFGFVQFAQLEHAKAAQSALN 440
VGN+HF++TE L+++FEP+G +E V L D + G+ KG+GFVQF HAK A + +N
Sbjct: 284 VGNIHFSVTEKDLQEIFEPYGELEQVILQRDELNPGRSKGYGFVQFVDPTHAKDALAEMN 343
Query: 441 GKLEIVGRTLKVSSVTDHVGTQDTA---------AKSAD--------------------F 471
G E+ GR ++V D + TA A+S F
Sbjct: 344 G-FELAGRQIRVGLGNDKFTPESTANLLRTFTQQAQSYQGSAFSGAGGRGAYAGGSGGIF 402
Query: 472 D-----DDDG--GGLALNAQSRA-LLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAIS 523
D DD G G AL+ A + + DR+ + ++A G A +G+
Sbjct: 403 DRTHSKDDRGVSGASALDDTDVAGVNFKTYDRSKLMDALARRDGPEVAKHGAQ------- 455
Query: 524 LPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDP----------AMETD--- 570
PVV +P V PV+ MA S+C+ ++N FD A++ D
Sbjct: 456 -PVVSKPRV-------PVVDRMA-------SKCIKIENAFDADQYFARSFRTALQADDSS 500
Query: 571 -------PDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMH 622
P++ ++ +V+ EC KYGRV HI VD + G +Y++F+S A + ++
Sbjct: 501 REQAAFGPNWIKGLETEVKAECDKKYGRVVHIAVDPNTDGDIYVKFDSVTGGEKALQGLN 560
Query: 623 MRWFARRLISAIFMKPEDYEAKF 645
R F R+I A ++ + Y + +
Sbjct: 561 GRNFNHRVIRASYVVDKIYNSLW 583
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 188 LRERERDLEMRESRRYKEKKEVVEPEA-DPERDQRTVFAYQMPLKATERDVYEFFSKAGK 246
+ +R+R + RR K EPE + +RD+RT+F Q+ +A R + FF G
Sbjct: 148 VSQRDRRRNGADDRRLSRKTP--EPEVTEDDRDKRTIFVQQISQRAETRHLRSFFETVGP 205
Query: 247 VRDVRLIMDRNSRRSKGVG 265
V + +++ DR + RSKGVG
Sbjct: 206 VVEAQIVKDRVTGRSKGVG 224
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 437
R ++V + LR FE GPV Q+ D TG+ KG G+V+F + E A
Sbjct: 180 RTIFVQQISQRAETRHLRSFFETVGPVVEAQIVKDRVTGRSKGVGYVEFKEEESVPKA-- 237
Query: 438 ALNGKLEIVGRTLK 451
LE+ G+ LK
Sbjct: 238 -----LELTGQKLK 246
>gi|114652057|ref|XP_001159475.1| PREDICTED: probable RNA-binding protein 23 isoform 10 [Pan
troglodytes]
Length = 442
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 142/301 (47%), Gaps = 74/301 (24%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 141 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 200
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 201 RNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG----------- 228
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
Q LLG P++V+ S+AEKN +N G GP
Sbjct: 229 ------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM 263
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG KG+GF+ F+ E A+
Sbjct: 264 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECAR 318
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A LNG E+ GR ++V VT+ + G D D + D G +A R L+ K
Sbjct: 319 RALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQLIAK 372
Query: 493 L 493
L
Sbjct: 373 L 373
>gi|395859409|ref|XP_003802032.1| PREDICTED: probable RNA-binding protein 23 [Otolemur garnettii]
Length = 449
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 121/381 (31%), Positives = 176/381 (46%), Gaps = 94/381 (24%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S +++K + EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 146 KSPHFRDKSPIREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 205
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 206 RNSRRSKGIA---------------------YVEFCEIQSVPLAIGLTG----------- 233
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN---LVQSNTSAGGTATGP 372
Q LLG P++V+ S+AEKN + +N G ++GP
Sbjct: 234 ------------------------QQLLGVPIIVQASQAEKNRLAAMANNLQKG--SSGP 267
Query: 373 YGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHA 432
L+VG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A
Sbjct: 268 M-----HLFVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECA 322
Query: 433 KAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQ 491
+ A LNG E+ GR +KV VT+ + G D D + D G + R LM
Sbjct: 323 RRALEQLNG-FELAGRPMKVGQVTERLDGGTDITFPDGDQELDLG-----STGGRLQLMA 376
Query: 492 KL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPV----PAVTAPVIP--N 544
KL + +GI P +A A + + AVP+ PA + P N
Sbjct: 377 KLAEGSGIQL---------PTAAATAAAAAAQAAALQLNGAVPLGALNPAALTALSPALN 427
Query: 545 MAAEFIGSPSECLLLKNMFDP 565
+A++ I S+C L ++F P
Sbjct: 428 LASQAIA--SQCFQLSSLFTP 446
>gi|281343373|gb|EFB18957.1| hypothetical protein PANDA_015655 [Ailuropoda melanoleuca]
Length = 369
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 122/381 (32%), Positives = 176/381 (46%), Gaps = 94/381 (24%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 66 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 125
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 126 RNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG----------- 153
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN---LVQSNTSAGGTATGP 372
Q LLG P++V+ S+AEKN + +N G ++GP
Sbjct: 154 ------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKG--SSGP 187
Query: 373 YGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHA 432
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A
Sbjct: 188 M-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECA 242
Query: 433 KAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQ 491
+ A LNG E+ GR ++V VT+ + G D D + D G +A R LM
Sbjct: 243 RRALEQLNG-FELAGRPMRVGQVTERLDGGIDITFPDGDQELDLG-----SAGGRLQLMA 296
Query: 492 KL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPV----PAVTAPVIP--N 544
KL + +GI P +A + + VP+ PA + P N
Sbjct: 297 KLAEGSGIQL---------PTTAAAAAAAAQAAAALQLNGTVPLGALNPAALTALSPALN 347
Query: 545 MAAEFIGSPSECLLLKNMFDP 565
+A++ I S+C L ++F P
Sbjct: 348 LASQAIA--SQCFQLSSLFTP 366
>gi|170284570|gb|AAI61141.1| rbm23 protein [Xenopus (Silurana) tropicalis]
Length = 272
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/208 (42%), Positives = 123/208 (59%), Gaps = 13/208 (6%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 379
Y+EF D+ SVP+AI L+GQ LLG P++V+ S+AEKN SN G GP +
Sbjct: 47 YVEFCDIQSVPLAIGLTGQRLLGVPIIVQVSQAEKNRLAAMSNNLQRGN-PGPM-----R 100
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG +E +QL + +TG+ KGFGF+ F E A+ A L
Sbjct: 101 LYVGSLHFNITEDMLRGIFEPFGKIENIQLLKEPDTGRSKGFGFITFTDAECARRALEQL 160
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGI 498
NG E+ GR +KV VTDH+ A D D+ + G+ L A R LM KL + TG+
Sbjct: 161 NG-FELAGRPMKVGHVTDHL-EGGGEASFLDSDELERTGIDLGATGRLQLMAKLAEGTGL 218
Query: 499 ATSIA--GSLGVAPAVNGSAVNQQAISL 524
+A +L + A+ +A+N +L
Sbjct: 219 QIPLAAQAALQLGGAIPLTALNPTLTAL 246
>gi|410261842|gb|JAA18887.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410349771|gb|JAA41489.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 442
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 142/301 (47%), Gaps = 74/301 (24%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 141 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 200
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 201 RNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG----------- 228
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
Q LLG P++V+ S+AEKN +N G GP
Sbjct: 229 ------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM 263
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG KG+GF+ F+ E A+
Sbjct: 264 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECAR 318
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A LNG E+ GR ++V VT+ + G D D + D G +A R L+ K
Sbjct: 319 RALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQLIAK 372
Query: 493 L 493
L
Sbjct: 373 L 373
>gi|291403543|ref|XP_002718110.1| PREDICTED: RNA binding motif protein 23 isoform 3 [Oryctolagus
cuniculus]
Length = 428
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 123/380 (32%), Positives = 175/380 (46%), Gaps = 94/380 (24%)
Query: 196 EMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+RE ++ + + PE ERD RTV Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 130 HIREKSPVRQPVDNLSPE---ERDARTVLCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 186
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 187 RNSRRSKGI---------------------AYVEFCDIQAVPLAIGLTG----------- 214
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
Q LLG P+MV+ S+AEKN +N G+ GP
Sbjct: 215 ------------------------QRLLGVPIMVQASQAEKNRLAAMANNLQKGSG-GPL 249
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E +
Sbjct: 250 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECGR 304
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A LNG E+ GR ++V VT+ GT D D + D G + R LM K
Sbjct: 305 RALEQLNG-FELAGRPMRVGHVTERPDGTTDITFPDGDQELDLG-----SPGGRLQLMAK 358
Query: 493 L-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPV----PAVTAPVIP--NM 545
L + +GI P +A QA +L + G AVP+ PA + P N+
Sbjct: 359 LAEGSGIQL---------PTTAVAAAAAQAAALQLNG--AVPLGALNPAALTALSPALNL 407
Query: 546 AAEFIGSPSECLLLKNMFDP 565
A++ I S+C L ++F P
Sbjct: 408 ASQAIA--SQCFQLSSLFTP 425
>gi|149756182|ref|XP_001494921.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Equus
caballus]
Length = 412
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 114/351 (32%), Positives = 166/351 (47%), Gaps = 78/351 (22%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNT 276
ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 131 ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGI------------ 178
Query: 277 LHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIA 336
++F + V + L G
Sbjct: 179 ---------AYVEFCEIQSVPLAIGLTG-------------------------------- 197
Query: 337 LSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQL 394
Q LLG P++V+ S+AEKN +N G+ GP +LYVG+LHFN+TE L
Sbjct: 198 ---QRLLGVPIIVQASQAEKNRLAAMANNLQKGSG-GPM-----RLYVGSLHFNITEDML 248
Query: 395 RKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSS 454
R +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG E+ GR ++V
Sbjct: 249 RGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVGH 307
Query: 455 VTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIAGSLGVAPAV 512
VT+ + G+ D D + D G +A SR LM KL + +GI + A A
Sbjct: 308 VTERLDGSTDITFPDGDQELDLG-----SAGSRLQLMAKLAEGSGIQLPTTAAAAAAAAQ 362
Query: 513 NGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMF 563
+ A+ L + A+ +P + N+A++ I S+C L ++F
Sbjct: 363 AAALQLNGAVPLGALNPTAL---TALSPAL-NLASQAIA--SQCFQLSSLF 407
>gi|115497272|ref|NP_001069104.1| probable RNA-binding protein 23 [Bos taurus]
gi|113911797|gb|AAI22594.1| RNA binding motif protein 23 [Bos taurus]
Length = 463
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 127/380 (33%), Positives = 177/380 (46%), Gaps = 88/380 (23%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 156 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 215
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG I + E+ V +G
Sbjct: 216 RNSRRSKG------------------------IAYVEFCEIQSVPLAIG----------- 240
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
L+GQ LLG P++V+ S+AEKN +N G+ GP
Sbjct: 241 ---------------------LTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSG-GPV 278
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LH N+TE LR + EPFG ++ + L D ETG+ KG+GF+ F+ E A+
Sbjct: 279 -----RLYVGSLHCNITEDMLRGILEPFGKIDNIVLMKDSETGRSKGYGFITFSDSECAR 333
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A LNG E+ GR +++ VT+ G D D + D G +A LM K
Sbjct: 334 RALEQLNG-FELAGRPMRIGHVTERPDGGTDITFPDGDQELDLG-----SAGGHLQLMAK 387
Query: 493 L-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPV----PAVTAPVIP--NM 545
L + +GI + A A A QA +L + G AVP+ PA + P N+
Sbjct: 388 LAEGSGIQLP---TTTAAAAAVAQAAAAQAAALQLNG--AVPLGALNPAALTALSPALNL 442
Query: 546 AAEFIGSPSECLLLKNMFDP 565
A++ I S+C L ++F P
Sbjct: 443 ASQAIA--SQCFQLSSLFTP 460
>gi|114652069|ref|XP_001159523.1| PREDICTED: probable RNA-binding protein 23 isoform 11 [Pan
troglodytes]
Length = 426
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 142/301 (47%), Gaps = 74/301 (24%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 125 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 184
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 185 RNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG----------- 212
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
Q LLG P++V+ S+AEKN +N G GP
Sbjct: 213 ------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM 247
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG KG+GF+ F+ E A+
Sbjct: 248 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECAR 302
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A LNG E+ GR ++V VT+ + G D D + D G +A R L+ K
Sbjct: 303 RALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQLIAK 356
Query: 493 L 493
L
Sbjct: 357 L 357
>gi|410261840|gb|JAA18886.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410349769|gb|JAA41488.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410349773|gb|JAA41490.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 426
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 142/301 (47%), Gaps = 74/301 (24%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 125 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 184
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG+ ++F + V + L G
Sbjct: 185 RNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG----------- 212
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
Q LLG P++V+ S+AEKN +N G GP
Sbjct: 213 ------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM 247
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 433
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG KG+GF+ F+ E A+
Sbjct: 248 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECAR 302
Query: 434 AAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 492
A LNG E+ GR ++V VT+ + G D D + D G +A R L+ K
Sbjct: 303 RALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQLIAK 356
Query: 493 L 493
L
Sbjct: 357 L 357
>gi|326485177|gb|EGE09187.1| RNA splicing factor [Trichophyton equinum CBS 127.97]
Length = 560
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 148/556 (26%), Positives = 222/556 (39%), Gaps = 159/556 (28%)
Query: 130 REKERERERDGER-RSSSRSRRSSSQSRRSSSRSRRERERESERERELELEREREREREL 188
R ++R R G R RS SRS R + R +R+ E+ R
Sbjct: 94 RSRKRNFYRGGGRTRSRSRSPLDDRYYRPTGRARRDGDDRDDEKRRS------------- 140
Query: 189 RERERDLEMRESRRYKEKKEVVEPE-ADPERDQRTVFAYQMPLKATERDVYEFFSKAGKV 247
R + + EP+ + ERD+RTVF Q+ + +++ FF K G V
Sbjct: 141 -------RRDRDSRRRSPSKTPEPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPV 193
Query: 248 RDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDET 307
++ +++ DR S RSKGVG ++F V + L G +
Sbjct: 194 KEAQIVKDRVSGRSKGVG---------------------YVEFKNEESVPLAIQLTGQK- 231
Query: 308 YTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA-- 365
++ +P+ L +EAEKN N A
Sbjct: 232 --------------------LLGIPIIAQL--------------TEAEKNRQARNPDAHS 257
Query: 366 -GGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFV 424
+ P+ +LYVGN+HF++TE+ L+ +FEPFG ++ VQL + E G+ KG+GFV
Sbjct: 258 NNNQQSIPF----HRLYVGNIHFSITESDLQNVFEPFGELDFVQLQRE-EAGRSKGYGFV 312
Query: 425 QFAQLEHAKAAQSALNGKLEIVGRTLKV--------------------------SSVTDH 458
QF A+ A +NG ++ GR ++V S + H
Sbjct: 313 QFRDPNQAREALEKMNG-FDLAGRPIRVGLGNDKFSHDPAQLMQRLQQQGHNQGSPYSHH 371
Query: 459 VG--------------------TQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGI 498
G A ++ DD D G+ N SR LM+KL RT
Sbjct: 372 GGRGANAGGSSGGNFDRAGGRDNDKGAGGASALDDTDVAGVNFNNYSRDALMRKLARTD- 430
Query: 499 ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLL 558
PA + ++ P A PV NMA S C+L
Sbjct: 431 ----------EPAAEPAPDEKRKA-------PKARTEAKPLPVTVNMA-------SRCVL 466
Query: 559 LKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASA 617
L+NMFDPA E + E++ DV EC KYG V HI +D + G +YL+F+ + +A
Sbjct: 467 LRNMFDPAQEEGESWVKELEDDVRAECEEKYGHVVHISLDPNTQGDIYLKFDRVQGGENA 526
Query: 618 QRAMHMRWFARRLISA 633
+ ++ R+F R ISA
Sbjct: 527 IKGLNGRFFGGRQISA 542
>gi|223999617|ref|XP_002289481.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974689|gb|EED93018.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 821
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 124/469 (26%), Positives = 203/469 (43%), Gaps = 115/469 (24%)
Query: 218 RDQRTVFAYQMPLKATERDVYEFFSKA------GKVRDVRLIMDRNSRRSKGVGNAIMMR 271
+DQRT+F Q+ +KA ERD+ +F + G VRDV L+ D+ + R KG
Sbjct: 412 KDQRTIFISQLVMKAEERDIRRYFQRKILNGHRGCVRDVILLRDKRTGRHKG-------- 463
Query: 272 DDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGD----ETYTVLDPATVLVSYR--YIEF 325
C ++ +++V G + + +L ++ L S +E
Sbjct: 464 -------------CAYVELANLSDVEKALDASGKTPDFQKFPILVKSSTLPSTPGGTVEG 510
Query: 326 YDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNL 385
+++V + + G+ + Q K+Y+GN+
Sbjct: 511 AVILAVAGGMTVDGKRVESQ---------------------------------KVYLGNV 537
Query: 386 HFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEI 445
+T+ QL LF FGP+E V L +D TG +GF F+ + + A A ++G+L +
Sbjct: 538 DRMVTQAQLYALFSQFGPLEKVLLQMDPTTGASRGFAFLSYRDPKDANLAIQTMSGQL-L 596
Query: 446 VGRTLKVSSVTDHVGTQDTAAKSADFDDDD--------------------GGGLALNAQS 485
G+ LK T Q AA + D+ G GL AQ
Sbjct: 597 AGKPLK----TGWANQQSAAAGIVEVKTDEIPADANEKVEKANAALIQLTGTGLITVAQQ 652
Query: 486 RALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVG-QPAV-PVPAVT----- 538
A L G A +LG+ PA +V + A+ + + G P V PVPAV
Sbjct: 653 GATAQALLSSGGAAA----ALGILPAQQVQSVAEAALEMALGGAAPNVQPVPAVAVAPSV 708
Query: 539 -------APVIPNMAAEFIG---SPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKY 588
APV+ + A +G +PS+ +L+ NMFD ET+P+++ +I+ D EEEC++Y
Sbjct: 709 STALIAPAPVV--VDATVVGRSDNPSQHILVHNMFDKDEETEPNWENDIKLDFEEECAQY 766
Query: 589 GRVKHIYV-DKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFM 636
G++ + V K G +Y FES+ A + + + RWF +R + F+
Sbjct: 767 GKMTSVVVMSKEVGGKIYASFESSRDAMNCAKNLAGRWFDKRQLRVEFV 815
>gi|149756180|ref|XP_001494897.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Equus
caballus]
Length = 430
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 176/374 (47%), Gaps = 85/374 (22%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKA--TERDVYEFFSKAGKVRDVRLI 253
+S ++EK V EP PE RD RTVF Q L A RD+ +FFS GKVRDVR+I
Sbjct: 128 KSPHFREKSPVREPVDNLSPEERDARTVFCMQ--LAARIRPRDLEDFFSAVGKVRDVRII 185
Query: 254 MDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDP 313
DRNSRRSKG+ ++F + V + L G
Sbjct: 186 SDRNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG--------- 215
Query: 314 ATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATG 371
Q LLG P++V+ S+AEKN +N G+ G
Sbjct: 216 --------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKGSG-G 248
Query: 372 PYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEH 431
P +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E
Sbjct: 249 PM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSEC 303
Query: 432 AKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLM 490
A+ A LNG E+ GR ++V VT+ + G+ D D + D G +A SR LM
Sbjct: 304 ARRALEQLNG-FELAGRPMRVGHVTERLDGSTDITFPDGDQELDLG-----SAGSRLQLM 357
Query: 491 QKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEF 549
KL + +GI + A A + A+ L + A+ +P + N+A++
Sbjct: 358 AKLAEGSGIQLPTTAAAAAAAAQAAALQLNGAVPLGALNPTAL---TALSPAL-NLASQA 413
Query: 550 IGSPSECLLLKNMF 563
I S+C L ++F
Sbjct: 414 IA--SQCFQLSSLF 425
>gi|431907193|gb|ELK11259.1| Putative RNA-binding protein 23 [Pteropus alecto]
Length = 914
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 135/431 (31%), Positives = 195/431 (45%), Gaps = 104/431 (24%)
Query: 142 RRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELRERERDLEMRESR 201
RS S RR S++SR S RR +R R L R + RE+
Sbjct: 80 HRSHSWDRRHSTESR---SWDRRREDRVHYRSPPLATGRRYGHSKSPHFREKS------- 129
Query: 202 RYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRS 261
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRS
Sbjct: 130 PVREPVDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRS 186
Query: 262 KGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYR 321
KG+ ++F + V + L G
Sbjct: 187 KGIA---------------------YVEFCEIQSVPLAIGLTGQR--------------- 210
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 379
++ VP ++V+ S+AEKN +N G+ GP +
Sbjct: 211 ------LLGVP--------------IIVQASQAEKNRLAAMANNLQKGSG-GP-----MR 244
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F++ E A+ A L
Sbjct: 245 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSESECARRALEQL 304
Query: 440 NGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTG 497
NG E+ GR ++V VT+ + G D D + D G +A R LM KL + +G
Sbjct: 305 NG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDPG-----SAGGRLQLMAKLAEGSG 358
Query: 498 I---ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPS 554
I T+ A +L + AV A+N ++ PA+ N+A++ I S
Sbjct: 359 IQLPTTAAAAALQLNGAVPLGALNPATLT---ALSPAL-----------NLASQAIA--S 402
Query: 555 ECLLLKNMFDP 565
C L N+F P
Sbjct: 403 HCFQLSNLFSP 413
>gi|440906315|gb|ELR56591.1| Putative RNA-binding protein 23 [Bos grunniens mutus]
Length = 463
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 125/378 (33%), Positives = 177/378 (46%), Gaps = 84/378 (22%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 156 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 215
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG I + E+ V +G
Sbjct: 216 RNSRRSKG------------------------IAYVEFCEIQSVPLAIG----------- 240
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGA 375
L+GQ LLG P++V+ S+AEKN + + A G G
Sbjct: 241 ---------------------LTGQRLLGVPIIVQASQAEKNRLAA--MANNLQKGNGGP 277
Query: 376 IDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAA 435
+ +LYVG+LH N+TE LR + EPFG ++ + L D ETG+ KG+GF+ F+ E A+ A
Sbjct: 278 V--RLYVGSLHCNITEDMLRGILEPFGKIDNIVLMKDSETGRSKGYGFITFSDSECARRA 335
Query: 436 QSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL- 493
LNG E+ GR +++ VT+ G D D + D G +A LM KL
Sbjct: 336 LEQLNG-FELAGRPMRIGHVTERPDGGTDITFPDGDQELDLG-----SAAGHLQLMAKLA 389
Query: 494 DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPV----PAVTAPVIP--NMAA 547
+ +GI + A A A QA +L + G AVP+ PA + P N+A+
Sbjct: 390 EGSGIQLP---TTTAAAAAVAQAAAAQAAALQLNG--AVPLGALNPAALTALSPALNLAS 444
Query: 548 EFIGSPSECLLLKNMFDP 565
+ + S+C L ++F P
Sbjct: 445 QAVA--SQCFQLSSLFTP 460
>gi|296483628|tpg|DAA25743.1| TPA: RNA binding motif protein 23 [Bos taurus]
Length = 463
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/299 (34%), Positives = 141/299 (47%), Gaps = 70/299 (23%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 156 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 215
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG I + E+ V +G
Sbjct: 216 RNSRRSKG------------------------IAYVEFCEIQSVPLAIG----------- 240
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGA 375
L+GQ LLG P++V+ S+AEKN + + A G G
Sbjct: 241 ---------------------LTGQRLLGVPIIVQASQAEKNRLAA--MANNLQKGSGGP 277
Query: 376 IDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAA 435
+ +LYVG+LH N+TE LR + EPFG ++ + L D ETG+ KG+GF+ F+ E A+ A
Sbjct: 278 V--RLYVGSLHCNITEDMLRGILEPFGKIDNIVLMKDSETGRSKGYGFITFSDSECARRA 335
Query: 436 QSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL 493
LNG E+ GR +++ VT+ G D D + D G +A LM KL
Sbjct: 336 LEQLNG-FELAGRPMRIGHVTERPDGGTDITFPDGDQELDLG-----SAGGHLQLMAKL 388
>gi|397473315|ref|XP_003808160.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Pan paniscus]
Length = 408
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/280 (35%), Positives = 133/280 (47%), Gaps = 71/280 (25%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNT 276
ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 128 ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGI------------ 175
Query: 277 LHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIA 336
++F + V + L G
Sbjct: 176 ---------AYVEFCEIQSVPLAIGLTG-------------------------------- 194
Query: 337 LSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQL 394
Q LLG P++V+ S+AEKN +N G GP +LYVG+LHFN+TE L
Sbjct: 195 ---QRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVGSLHFNITEDML 245
Query: 395 RKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSS 454
R +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG E+ GR ++V
Sbjct: 246 RGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVGH 304
Query: 455 VTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL 493
VT+ + G D D + D G +A R LM KL
Sbjct: 305 VTERLDGGTDITFPDGDQELDLG-----SAGGRFQLMAKL 339
>gi|301781272|ref|XP_002926047.1| PREDICTED: probable RNA-binding protein 23-like isoform 3
[Ailuropoda melanoleuca]
Length = 412
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 115/360 (31%), Positives = 166/360 (46%), Gaps = 91/360 (25%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNT 276
ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 130 ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGI------------ 177
Query: 277 LHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIA 336
++F + V + L G
Sbjct: 178 ---------AYVEFCEIQSVPLAIGLTG-------------------------------- 196
Query: 337 LSGQLLLGQPVMVKPSEAEKN---LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQ 393
Q LLG P++V+ S+AEKN + +N G ++GP +LYVG+LHFN+TE
Sbjct: 197 ---QRLLGVPIIVQASQAEKNRLAAMANNLQKG--SSGPM-----RLYVGSLHFNITEDM 246
Query: 394 LRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVS 453
LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG E+ GR ++V
Sbjct: 247 LRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVG 305
Query: 454 SVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIAGSLGVAPA 511
VT+ + G D D + D G +A R LM KL + +GI P
Sbjct: 306 QVTERLDGGIDITFPDGDQELDLG-----SAGGRLQLMAKLAEGSGIQL---------PT 351
Query: 512 VNGSAVNQQAISLPVVGQPAVPV----PAVTAPVIP--NMAAEFIGSPSECLLLKNMFDP 565
+A + + VP+ PA + P N+A++ I S+C L ++F P
Sbjct: 352 TAAAAAAAAQAAAALQLNGTVPLGALNPAALTALSPALNLASQAIA--SQCFQLSSLFTP 409
>gi|410961884|ref|XP_003987508.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Felis catus]
Length = 411
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 115/358 (32%), Positives = 162/358 (45%), Gaps = 87/358 (24%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNT 276
ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 129 ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGI------------ 176
Query: 277 LHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIA 336
++F + V + L G
Sbjct: 177 ---------AYVEFCEIQSVPLAIGLTG-------------------------------- 195
Query: 337 LSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQL 394
Q LLG P++V+ S+AEKN +N G+ GP +LYVG+LHFN+TE L
Sbjct: 196 ---QRLLGVPIIVQASQAEKNRLAAMANNLQKGSG-GPM-----RLYVGSLHFNITEDML 246
Query: 395 RKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSS 454
R +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG E+ GR ++V
Sbjct: 247 RGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVGH 305
Query: 455 VTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVN 513
VT+ + G D D + D G +A R LM KL GS P
Sbjct: 306 VTERLDGGTDITFPDGDQELDLG-----SAGGRLQLMAKLAE--------GSGMQLPTTT 352
Query: 514 GSAVNQQAISLPVVGQPAVPV----PAVTAPVIP--NMAAEFIGSPSECLLLKNMFDP 565
+A + + VP+ PA + P N+A++ I S+C L ++F P
Sbjct: 353 AAAAAAAQAAAALQLNGTVPLGALNPAALTALSPALNLASQAIA--SQCFQLSSLFTP 408
>gi|426376374|ref|XP_004054976.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Gorilla
gorilla gorilla]
Length = 403
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/280 (35%), Positives = 133/280 (47%), Gaps = 71/280 (25%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNT 276
ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 128 ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGI------------ 175
Query: 277 LHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIA 336
++F + V + L G
Sbjct: 176 ---------AYVEFCEIQSVPLAIGLTG-------------------------------- 194
Query: 337 LSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQL 394
Q LLG P++V+ S+AEKN +N G GP +LYVG+LHFN+TE L
Sbjct: 195 ---QRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVGSLHFNITEDML 245
Query: 395 RKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSS 454
R +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG E+ GR ++V
Sbjct: 246 RGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVGH 304
Query: 455 VTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL 493
VT+ + G D D + D G +A R LM KL
Sbjct: 305 VTERLDGGTDITFPDGDQELDLG-----SAGGRLQLMAKL 339
>gi|440487895|gb|ELQ67659.1| RNA-binding protein rsd1 [Magnaporthe oryzae P131]
Length = 570
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 194/477 (40%), Gaps = 131/477 (27%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNT 276
ERD+RTVF Q+ + R++ EFF KAG V + +++ DR S RSKGVG
Sbjct: 171 ERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVG----------- 219
Query: 277 LHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIA 336
++F V L G + ++ +P
Sbjct: 220 ----------YVEFKTEESVAAALQLTGQK---------------------LLGIP---- 244
Query: 337 LSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATG-PYGAIDRKLYVGNLHFNMTETQLR 395
V+V+P+EAEKN S G T P+ +LYVGN+HF++TE L+
Sbjct: 245 ----------VIVQPTEAEKNRAVKTESTGTQQTSVPF----HRLYVGNIHFSITEQDLQ 290
Query: 396 KLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSV 455
+FEPFG +E VQL D ++G+ +G+GFVQF A+ A +NG ++ GR ++V
Sbjct: 291 NVFEPFGELEFVQLQKD-DSGRSRGYGFVQFRDATQAREALEKMNG-FDLAGRPIRVGLG 348
Query: 456 TDHVGTQDTA----------------------------------------------AKSA 469
D + TA + ++
Sbjct: 349 NDKFTPESTANLLRGFQGPNGQQQYQGSAFSGSGGRGAAGQPSNFDRAGGRDNDKGSGAS 408
Query: 470 DFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQ 529
DD D G+ N SR LM+KL RT ++ ++ I P
Sbjct: 409 ALDDTDVAGVNFNNFSRDALMRKLARTDEPSTTQ--------------PERQILKPRTEV 454
Query: 530 PAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKY 588
+P+ V A+F + F E D+ E++ DV +E KY
Sbjct: 455 KPLPINNVN-------QAKFGQGNTYDSSTDQFFCFYREEGDDWVKELEEDVRQEAEEKY 507
Query: 589 GRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
G V HI +D S G +YL+F+ + +A + ++ R+F R+I+A + Y + F
Sbjct: 508 GHVVHISLDPNSQGDIYLKFDRVQGGENAIKGLNGRYFGGRMITAAPVVDAFYSSLF 564
>gi|301781270|ref|XP_002926046.1| PREDICTED: probable RNA-binding protein 23-like isoform 2
[Ailuropoda melanoleuca]
Length = 430
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 124/383 (32%), Positives = 176/383 (45%), Gaps = 98/383 (25%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKA--TERDVYEFFSKAGKVRDVRLI 253
+S ++EK V EP PE RD RTVF Q L A RD+ +FFS GKVRDVR+I
Sbjct: 127 KSPHFREKSPVREPIDNLSPEERDARTVFCMQ--LAARIRPRDLEDFFSAVGKVRDVRII 184
Query: 254 MDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDP 313
DRNSRRSKG+ ++F + V + L G
Sbjct: 185 SDRNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG--------- 214
Query: 314 ATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN---LVQSNTSAGGTAT 370
Q LLG P++V+ S+AEKN + +N G ++
Sbjct: 215 --------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKG--SS 246
Query: 371 GPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLE 430
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E
Sbjct: 247 GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 301
Query: 431 HAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALL 489
A+ A LNG E+ GR ++V VT+ + G D D + D G +A R L
Sbjct: 302 CARRALEQLNG-FELAGRPMRVGQVTERLDGGIDITFPDGDQELDLG-----SAGGRLQL 355
Query: 490 MQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPV----PAVTAPVIP- 543
M KL + +GI P +A + + VP+ PA + P
Sbjct: 356 MAKLAEGSGIQL---------PTTAAAAAAAAQAAAALQLNGTVPLGALNPAALTALSPA 406
Query: 544 -NMAAEFIGSPSECLLLKNMFDP 565
N+A++ I S+C L ++F P
Sbjct: 407 LNLASQAIA--SQCFQLSSLFTP 427
>gi|291403539|ref|XP_002718108.1| PREDICTED: RNA binding motif protein 23 isoform 1 [Oryctolagus
cuniculus]
Length = 410
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 166/359 (46%), Gaps = 91/359 (25%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNT 276
ERD RTV Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 130 ERDARTVLCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGI------------ 177
Query: 277 LHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIA 336
++F + V + L G
Sbjct: 178 ---------AYVEFCDIQAVPLAIGLTG-------------------------------- 196
Query: 337 LSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQL 394
Q LLG P+MV+ S+AEKN +N G+ GP +LYVG+LHFN+TE L
Sbjct: 197 ---QRLLGVPIMVQASQAEKNRLAAMANNLQKGSG-GPL-----RLYVGSLHFNITEDML 247
Query: 395 RKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSS 454
R +FEPFG ++ + L D +TG+ KG+GF+ F+ E + A LNG E+ GR ++V
Sbjct: 248 RGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECGRRALEQLNG-FELAGRPMRVGH 306
Query: 455 VTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIAGSLGVAPAV 512
VT+ GT D D + D G + R LM KL + +GI P
Sbjct: 307 VTERPDGTTDITFPDGDQELDLG-----SPGGRLQLMAKLAEGSGIQL---------PTT 352
Query: 513 NGSAVNQQAISLPVVGQPAVPV----PAVTAPVIP--NMAAEFIGSPSECLLLKNMFDP 565
+A QA +L + G AVP+ PA + P N+A++ I S+C L ++F P
Sbjct: 353 AVAAAAAQAAALQLNG--AVPLGALNPAALTALSPALNLASQAIA--SQCFQLSSLFTP 407
>gi|410961882|ref|XP_003987507.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Felis catus]
Length = 429
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 124/381 (32%), Positives = 172/381 (45%), Gaps = 94/381 (24%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKA--TERDVYEFFSKAGKVRDVRLI 253
+S ++EK V EP PE RD RTVF Q L A RD+ +FFS GKVRDVR+I
Sbjct: 126 KSPHFREKSPVREPIDNLSPEERDARTVFCMQ--LAARIRPRDLEDFFSAVGKVRDVRII 183
Query: 254 MDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDP 313
DRNSRRSKG+ ++F + V + L G
Sbjct: 184 SDRNSRRSKGI---------------------AYVEFCEIQSVPLAIGLTG--------- 213
Query: 314 ATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATG 371
Q LLG P++V+ S+AEKN +N G+ G
Sbjct: 214 --------------------------QRLLGVPIIVQASQAEKNRLAAMANNLQKGSG-G 246
Query: 372 PYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEH 431
P +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E
Sbjct: 247 PM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSEC 301
Query: 432 AKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLM 490
A+ A LNG E+ GR ++V VT+ + G D D + D G +A R LM
Sbjct: 302 ARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRLQLM 355
Query: 491 QKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPV----PAVTAPVIP--N 544
KL GS P +A + + VP+ PA + P N
Sbjct: 356 AKLAE--------GSGMQLPTTTAAAAAAAQAAAALQLNGTVPLGALNPAALTALSPALN 407
Query: 545 MAAEFIGSPSECLLLKNMFDP 565
+A++ I S+C L ++F P
Sbjct: 408 LASQAIA--SQCFQLSSLFTP 426
>gi|345804022|ref|XP_003435135.1| PREDICTED: probable RNA-binding protein 23 [Canis lupus familiaris]
Length = 411
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/354 (31%), Positives = 170/354 (48%), Gaps = 79/354 (22%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNT 276
ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 129 ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGI------------ 176
Query: 277 LHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIA 336
++F + V + L G
Sbjct: 177 ---------AYVEFCEIQSVPLAIGLTG-------------------------------- 195
Query: 337 LSGQLLLGQPVMVKPSEAEKN---LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQ 393
Q LLG P++V+ S+AEKN + +N G ++GP +LYVG+LHFN+TE
Sbjct: 196 ---QRLLGVPIIVQASQAEKNRLAAMANNLQKG--SSGPM-----RLYVGSLHFNITEDM 245
Query: 394 LRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVS 453
LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG E+ GR ++V
Sbjct: 246 LRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVG 304
Query: 454 SVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIAGSLGVAPA 511
VT+ + G D + + D G +A R LM KL + +GI + A A
Sbjct: 305 HVTERLDGGTDITFPDGEQELDLG-----SAGGRLQLMAKLAEGSGIQLPTTAAAAAAAA 359
Query: 512 VNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDP 565
+A+ ++P+ G + A++ + N+A++ I S+C L ++F P
Sbjct: 360 QAAAALQLNG-TVPLGGLNPAALTALSPAL--NLASQAIA--SQCFQLSSLFTP 408
>gi|126277401|ref|XP_001369188.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Monodelphis
domestica]
Length = 415
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/357 (33%), Positives = 167/357 (46%), Gaps = 90/357 (25%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNT 276
ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 138 ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGI------------ 185
Query: 277 LHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIA 336
++F + V + L G
Sbjct: 186 ---------AYVEFCEIQSVPLAIGLTG-------------------------------- 204
Query: 337 LSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQL 394
Q LLG P++V+ S+AEKN +N G+ GP +LYVG+LHFN+TE L
Sbjct: 205 ---QRLLGVPIIVQASQAEKNRLAAMANNLQKGSG-GPM-----RLYVGSLHFNITEDML 255
Query: 395 RKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSS 454
R +FEPFG ++ + L D +TG+ KGFGF+ F+ E A+ A LNG E+ GR ++V
Sbjct: 256 RGIFEPFGKIDNIVLMKDPDTGRSKGFGFLTFSDSECARRALEQLNG-FELAGRPMRVGH 314
Query: 455 VTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGI--ATSIAGSLGVAP 510
VT+ + G D + D G A R LM KL + +GI T+ A + A
Sbjct: 315 VTERLDGGTDITFPDGGEELDLG-----TAGGRLQLMAKLAEGSGIQLPTTAAAAQAAAL 369
Query: 511 AVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIP--NMAAEFIGSPSECLLLKNMFDP 565
+NG AV A++ PA + P N+A++ I S+C L ++F P
Sbjct: 370 QLNG-AVPLGALN-----------PAALTALSPALNLASQAIA--SQCFQLSSLFTP 412
>gi|114652071|ref|XP_522797.2| PREDICTED: probable RNA-binding protein 23 isoform 12 [Pan
troglodytes]
Length = 408
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/280 (34%), Positives = 132/280 (47%), Gaps = 71/280 (25%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNT 276
ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 128 ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGI------------ 175
Query: 277 LHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIA 336
++F + V + L G
Sbjct: 176 ---------AYVEFCEIQSVPLAIGLTG-------------------------------- 194
Query: 337 LSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQL 394
Q LLG P++V+ S+AEKN +N G GP +LYVG+LHFN+TE L
Sbjct: 195 ---QRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVGSLHFNITEDML 245
Query: 395 RKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSS 454
R +FEPFG ++ + L D +TG KG+GF+ F+ E A+ A LNG E+ GR ++V
Sbjct: 246 RGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVGH 304
Query: 455 VTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL 493
VT+ + G D D + D G +A R L+ KL
Sbjct: 305 VTERLDGGTDITFPDGDQELDLG-----SAGGRFQLIAKL 339
>gi|169599154|ref|XP_001793000.1| hypothetical protein SNOG_02393 [Phaeosphaeria nodorum SN15]
gi|160704547|gb|EAT90605.2| hypothetical protein SNOG_02393 [Phaeosphaeria nodorum SN15]
Length = 544
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 167/366 (45%), Gaps = 65/366 (17%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF D SV A+ L+GQ L G P++ + +EAEKN + G R LY
Sbjct: 195 YVEFKDEESVAKALELTGQKLKGVPIIAQLTEAEKNRAARPSEGGAAPGANGAPFHR-LY 253
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLD-IETGQCKGFGFVQFAQLEHAKAAQSALN 440
VGN+HF++TE L +F PFG +E V L D + KG+GFVQF AK A + +N
Sbjct: 254 VGNIHFSVTEQDLHTIFAPFGELEQVTLQRDETNPARSKGYGFVQFVDPTKAKEALAEMN 313
Query: 441 GKLEIVGRTLKVSSVTDHVGTQDTAAKSADFD---------------------------- 472
G E+ GR ++V D + TA+ F+
Sbjct: 314 G-FELAGRQIRVGLGNDKFTPESTASLLRTFNQQAQSYQGSAFSGAGGRGAYAGGTGGVF 372
Query: 473 ------DDDG--GGLALNAQSRA-LLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAIS 523
DD G G AL+ A + + DR+ + ++A G A I+
Sbjct: 373 DRTHSKDDRGVSGASALDDSDVAGVNFKTYDRSKLMNALARRDGPEAAAQ--------IA 424
Query: 524 LPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETD---PDFDLEIQGD 580
PVV +P P+ V P+ S+C+ ++N FD E P + +++G+
Sbjct: 425 RPVVSKPRDPI--VDKPM-----------ASKCIKIENAFDADQELQQFGPSWVKDLEGE 471
Query: 581 VEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPE 639
V+ EC KYG+V HI V+ S G VY++F+S A R ++ R F R+I A ++ +
Sbjct: 472 VKLECDKKYGKVVHIAVEPNSEGDVYVKFDSVTGGEKALRGLNGRNFNHRVIRASYVVDK 531
Query: 640 DYEAKF 645
Y + +
Sbjct: 532 IYNSLW 537
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 208 EVVEPEA-DPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG 265
+ V PE + +RD+RT+F Q+ +A + FF G V + +++ DR + RSKGVG
Sbjct: 136 KTVSPEVTEDDRDKRTIFVQQISQRALTHHLLAFFETVGPVIEAQIVKDRVTGRSKGVG 194
>gi|219120589|ref|XP_002181030.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407746|gb|EEC47682.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 687
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 130/470 (27%), Positives = 202/470 (42%), Gaps = 118/470 (25%)
Query: 218 RDQRTVFAYQMPLKATERDVYEFFSKAG-KVRDVRLIMDRNSRRSKGVGNAIMMRDDGNT 276
+DQRTVF Q+ + ERD+ +FF++ G KV +V I++RD
Sbjct: 284 KDQRTVFVTQLVQRTQERDLKKFFTRKGCKVNEV-----------------ILLRDKRTG 326
Query: 277 LHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIA 336
H C Y+E + V +A+
Sbjct: 327 KH----KGCA-----------------------------------YVEMKRMEDVSIAVG 347
Query: 337 LSGQLLLGQ--PVMVKPSEAEKNLVQSNTSAGGTAT------------GPYGAI--DRKL 380
LS ++ Q PV+VK SEAEKN + + ++A TA GP G + +K+
Sbjct: 348 LSAEVPDFQRFPVLVKASEAEKNYLANASTATSTAAQMGVPIKSAPLLGPDGKMLEAQKV 407
Query: 381 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF-----AQLEHAKAA 435
Y+G+L ++++ L LF FG +E V L +D TG KGF F+ F A L A
Sbjct: 408 YIGSLDPSVSQEHLFALFSQFGQLEKVTLQMDSNTGLSKGFAFLTFHDPKEANLAIQTMA 467
Query: 436 QSALNGKLEIVGRTLKVSSVTD-HVGTQDTAAKSADFDDDDGGGLALNAQSRAL-LMQKL 493
AL G+ G + SS+ V T D +F D A +RA Q L
Sbjct: 468 NQALAGRPMKTGWASQGSSIPGVEVVTSD------EFPAD--------ASTRAQRAYQVL 513
Query: 494 DRTGIATSIAGSLGVAPAVNG----SAVNQQAISLPVVGQ------------PAVPVPAV 537
+ + +A S+G AP + +AV A +P V + PA P V
Sbjct: 514 AQLTMGVPVA-SVGQAPGTSSFAAAAAVPGGASRIPTVAEARASLAGAVAMAPATPAVLV 572
Query: 538 TAPVIPNMA---AEFIG---SPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRV 591
P + + A+ +G +P++ +L++NMFD ETDP ++ +I+ + E+ECSKYG +
Sbjct: 573 PTPAVAPLGSPDAKIVGNADTPTKNVLIRNMFDKDKETDPGWEKDIKEEFEDECSKYGTI 632
Query: 592 KHIYV-DKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPED 640
+ V G +Y F+S A ++ RWF +R + F+ +D
Sbjct: 633 TSVTVMHMEPGGKIYASFDSVIGAQKCASSLAGRWFDKRQLRVDFVADKD 682
>gi|297259926|ref|XP_002798213.1| PREDICTED: RNA-binding protein 39-like [Macaca mulatta]
Length = 427
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 132/256 (51%), Gaps = 16/256 (6%)
Query: 394 LRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVS 453
L + F G +E +QL +D ETG+ KG+GF+ F+ E AK A LNG E+ GR +KV
Sbjct: 169 LEEFFSTVGKIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG-FELAGRPMKVG 227
Query: 454 SVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DRTGIATSIAGSLGVAP 510
VT+ D ++ S+ D D+ G+ L R LM +L + TG L + P
Sbjct: 228 HVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTG--------LQIPP 276
Query: 511 AVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETD 570
A + +++ V + T AA ++C L NMF+P E +
Sbjct: 277 AAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEE 336
Query: 571 PDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARR 629
+D EI+ DV EEC+K+G V HIYVDK SA G VY++ S AA +A A+H RWFA +
Sbjct: 337 VGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGK 396
Query: 630 LISAIFMKPEDYEAKF 645
+I+A ++ Y F
Sbjct: 397 MITAAYVPLPTYHNLF 412
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GK+ ++L+MD + R
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKIESIQLMMDSETGR 192
Query: 261 SKGVG 265
SKG G
Sbjct: 193 SKGYG 197
>gi|390342940|ref|XP_001198098.2| PREDICTED: RNA-binding protein 39-like [Strongylocentrotus
purpuratus]
Length = 666
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 110/192 (57%), Gaps = 10/192 (5%)
Query: 322 YIEFYDVM-SVPMAIALSGQLLLGQPVMVKPSEAEKN-LVQSNTSAGGTATGPYGAIDRK 379
Y+E YDV SVP+A+ L+ Q LLG P++V+PS AEKN N + +GP +
Sbjct: 253 YVE-YDVADSVPLALGLNNQKLLGVPIIVQPSHAEKNRSAGQNVTLQKVNSGPM-----R 306
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LH+N+TE LR +FEPFG ++ +QL +D + + KG+GF+ F E AK A L
Sbjct: 307 LYVGSLHYNITEAMLRGIFEPFGKIDNIQLMMDTDANRSKGYGFITFHDAEDAKRALDQL 366
Query: 440 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGI 498
NG E+ GR +KV+ VT+ A D ++ D G+ LN R LM KL + TG
Sbjct: 367 NG-FELAGRPMKVNHVTERNEQGQQAPSFLDSEELDKRGITLNTTGRLQLMAKLAEGTGF 425
Query: 499 ATSIAGSLGVAP 510
A + + P
Sbjct: 426 QIPAAAAEALHP 437
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Query: 554 SECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTE 612
+ C +L NMFDP ET ++ +I+ DV EEC+K+G V HI+VDK S G VY++ + +
Sbjct: 556 TACFMLSNMFDPQAETMLGWETDIRDDVIEECNKHGGVLHIHVDKASPQGNVYVKCPTAQ 615
Query: 613 AAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
A +A +H RWFA ++I+A +M +Y A F
Sbjct: 616 IAMAALNNLHNRWFAGKMITAAYMPVANYHAIF 648
>gi|291403541|ref|XP_002718109.1| PREDICTED: RNA binding motif protein 23 isoform 2 [Oryctolagus
cuniculus]
Length = 444
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/254 (37%), Positives = 138/254 (54%), Gaps = 35/254 (13%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 379
Y+EF D+ +VP+AI L+GQ LLG P+MV+ S+AEKN +N G+ GP +
Sbjct: 213 YVEFCDIQAVPLAIGLTGQRLLGVPIMVQASQAEKNRLAAMANNLQKGSG-GPL-----R 266
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E + A L
Sbjct: 267 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECGRRALEQL 326
Query: 440 NGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTG 497
NG E+ GR ++V VT+ GT D D + D G + R LM KL + +G
Sbjct: 327 NG-FELAGRPMRVGHVTERPDGTTDITFPDGDQELDLG-----SPGGRLQLMAKLAEGSG 380
Query: 498 IATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPV----PAVTAPVIP--NMAAEFIG 551
I P +A QA +L + G AVP+ PA + P N+A++ I
Sbjct: 381 IQL---------PTTAVAAAAAQAAALQLNG--AVPLGALNPAALTALSPALNLASQAIA 429
Query: 552 SPSECLLLKNMFDP 565
S+C L ++F P
Sbjct: 430 --SQCFQLSSLFTP 441
>gi|334362319|gb|AEG78359.1| RNA binding motif protein 39 [Epinephelus coioides]
Length = 238
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/251 (35%), Positives = 126/251 (50%), Gaps = 49/251 (19%)
Query: 414 ETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDD 473
ETG+ KG+GF+ FA E AK A LNG E+ GR +KV VT+ D++ S+ D+
Sbjct: 3 ETGRSKGYGFISFADAECAKKALEQLNG-FELAGRPMKVGHVTER---SDSSTASSFLDN 58
Query: 474 DDG--GGLALNAQSRALLMQKL-DRTGI--------ATSIAGSLGVAPAVN-------GS 515
D+ G+ L R LM +L + TG+ A + GS+ P N +
Sbjct: 59 DELERTGIDLGTTGRLQLMARLAEGTGLKIPPAAQQALQMTGSI---PFGNIAAPPAVPT 115
Query: 516 AVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDL 575
QA++LP QP + CL L N+F+P E DP + +
Sbjct: 116 PAPSQALNLP--SQPLA---------------------THCLQLSNLFNPQAENDPSWAI 152
Query: 576 EIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAI 634
EIQ DV EEC+K+G + HIYVDK SA G VY++ S AA + A+H RWFA ++I+A
Sbjct: 153 EIQDDVIEECNKHGGIVHIYVDKNSAQGNVYVKCPSIPAAMATVNALHGRWFAGKMITAA 212
Query: 635 FMKPEDYEAKF 645
++ Y F
Sbjct: 213 YVPLPTYHNLF 223
>gi|321259451|ref|XP_003194446.1| hypothetical protein CGB_E5340C [Cryptococcus gattii WM276]
gi|317460917|gb|ADV22659.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 615
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 158/545 (28%), Positives = 239/545 (43%), Gaps = 115/545 (21%)
Query: 150 RSSSQSRRS-----SSRSRRERE---------RESERERELELERERERERELRERERD- 194
R SS RS S RS R+R+ RES E E +R RE + ERD
Sbjct: 137 RPSSHRDRSRESHRSYRSHRDRDEMPPIRPMNRESRDIAEERRENDRRREMHFADLERDG 196
Query: 195 ---------------------LEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKAT 233
R ++ + E D E R++F Q+ + T
Sbjct: 197 RMRSPPPRRRRLSPEYGGPRGPPPRRPPPPRDPATALIEEVDSE--ARSIFVSQLSARMT 254
Query: 234 ERDVYEFFSKA---GKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKF 290
+ + FF G VRD R++ D+ +RRSKG+G + D L+N +
Sbjct: 255 SQVLGLFFEDKLGRGAVRDARVVTDKVARRSKGIGYVELDSVD-------LVNKALALSG 307
Query: 291 FLVAEVGMVFFLLGDE---TYTVLDPATVLVSY--RYIEFYDVMSVPMA---IALSGQLL 342
+V + + L E + T L AT L S + SVP LS L
Sbjct: 308 TVVMGIPINIMLTEAERNHSGTELITATALASNARSHGGGGGRSSVPFTQNYPPLSTGLA 367
Query: 343 LGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFG 402
L P+ + P +A K+ A PY +L+V NL F++T +R++FEPFG
Sbjct: 368 L--PLGLDP-DAHKD-----------AAIPY----HRLFVSNLAFSLTADDVRQVFEPFG 409
Query: 403 PVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQ 462
+E V L +D +G KG +VQF ++ A+ A A+ G ++ GR +KV ++ + GT
Sbjct: 410 EIEFVDLHMD-PSGLRKGTAYVQFKDVKSAQMALDAMAG-FDLAGRLIKVQTIQER-GTY 466
Query: 463 DTAAKSADFDDDDGG-GLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQA 521
T D +D G G L+A R LM KL RT P+VN S
Sbjct: 467 QT----PDLIEDSGNYGTRLDANQRQQLMFKLART------------EPSVNLS------ 504
Query: 522 ISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDV 581
+S P + VPA+ P+ +++ NMF+P ET+ ++DL++ DV
Sbjct: 505 LSAPKISGSQSKVPAM--------------DPTPRIVVHNMFNPEEETERNWDLDLAEDV 550
Query: 582 EEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPED 640
+ E SKYG+VK I V+K SAG VY+ F T++A A + ++ R+F R + ++
Sbjct: 551 KGEVESKYGKVKRIKVEKMSAGEVYIEFIDTDSAIKAVKGLNGRFFGGRQLQVGYITEAL 610
Query: 641 YEAKF 645
+ A
Sbjct: 611 FNAHL 615
>gi|403264879|ref|XP_003924694.1| PREDICTED: probable RNA-binding protein 23 [Saimiri boliviensis
boliviensis]
Length = 394
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 132/296 (44%), Gaps = 81/296 (27%)
Query: 164 RERERESERERELELERERERERELRERERDLEMRESRRY--------KEKKEVVEP--E 213
+ R R +R R R+ RE R R R + RY +EK V EP
Sbjct: 97 QHRHRSRSWDRRHSESRSRDHRREDRVRYRSPPLPTGHRYGHSKSPHFREKSPVREPIDN 156
Query: 214 ADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRD 272
PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 157 LSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGI-------- 208
Query: 273 DGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVP 332
++F + V + L G
Sbjct: 209 -------------AYVEFCEIQSVPLAIGLTG---------------------------- 227
Query: 333 MAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMT 390
Q LLG P++V+ S+AEKN +N GT GP +LYVG+LHFN+T
Sbjct: 228 -------QRLLGVPIIVQASQAEKNRLAAMANNLQKGTG-GPM-----RLYVGSLHFNIT 274
Query: 391 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIV 446
E LR +FEPFG ++ + L D +TG+ KG+GF+ L+ + N +L IV
Sbjct: 275 EDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITVNNLD------TYTNSRLGIV 324
>gi|442761059|gb|JAA72688.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Ixodes ricinus]
Length = 235
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 125/249 (50%), Gaps = 61/249 (24%)
Query: 210 VEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIM 269
+ PE ERD RTVF Q+ + RD+ EFFS GKVRDVRLIMD +RRSKG+
Sbjct: 35 ITPE---ERDMRTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMDNKTRRSKGI----- 86
Query: 270 MRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVM 329
++F V V + L G + + +
Sbjct: 87 ----------------AYVEFQDVESVPLAMGLNGQKLFGI------------------- 111
Query: 330 SVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID-RKLYVGNLHFN 388
P++V+P++AE+N + +++ ++T G I +LYVG+LHFN
Sbjct: 112 ----------------PIVVQPTQAERNRAAAQSASTSSSTLQRGNIGPMRLYVGSLHFN 155
Query: 389 MTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGR 448
+TE L+ +FEPFG ++ ++L D+ET + KG+GF+ F E AK A LNG E+ GR
Sbjct: 156 ITEDMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQLNG-FELAGR 214
Query: 449 TLKVSSVTD 457
+KV VT+
Sbjct: 215 PMKVGHVTE 223
>gi|21739702|emb|CAD38887.1| hypothetical protein [Homo sapiens]
gi|119586632|gb|EAW66228.1| RNA binding motif protein 23, isoform CRA_g [Homo sapiens]
Length = 319
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 125/279 (44%), Gaps = 76/279 (27%)
Query: 161 RSRRERERESERERELELERERERERELRERERDLEMRESRRY--------KEKKEVVEP 212
R R R R +R E R R+ RE R R + RY +EK V EP
Sbjct: 96 RQCRHRSRSWDRRHGSE-SRSRDHRREDRVHYRSPPLATGYRYGHSKSPHFREKSPVREP 154
Query: 213 --EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIM 269
PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 155 VDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG------ 208
Query: 270 MRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVM 329
I + E+ V +G
Sbjct: 209 ------------------IAYVEFCEIQSVPLAIG------------------------- 225
Query: 330 SVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHF 387
L+GQ LLG P++V+ S+AEKN +N G GP +LYVG+LHF
Sbjct: 226 -------LTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVGSLHF 272
Query: 388 NMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF 426
N+TE LR +FEPFG ++ + L D +TG+ KG+GF+
Sbjct: 273 NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITL 311
>gi|441667161|ref|XP_004091953.1| PREDICTED: probable RNA-binding protein 23 [Nomascus leucogenys]
Length = 319
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 112/233 (48%), Gaps = 67/233 (28%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 141 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 200
Query: 256 RNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPAT 315
RNSRRSKG I + E+ V +G
Sbjct: 201 RNSRRSKG------------------------IAYVEFCEIQSVPLAIG----------- 225
Query: 316 VLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 373
L+GQ LLG P++V+ S+AEKN +N G+ GP
Sbjct: 226 ---------------------LTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSG-GPM 263
Query: 374 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF 426
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+
Sbjct: 264 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITL 311
>gi|119586631|gb|EAW66227.1| RNA binding motif protein 23, isoform CRA_f [Homo sapiens]
Length = 269
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 132/248 (53%), Gaps = 26/248 (10%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 379
Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G GP +
Sbjct: 41 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----R 94
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A L
Sbjct: 95 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 154
Query: 440 NGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTG 497
NG E+ GR ++V VT+ + G D D + D G +A R LM KL + G
Sbjct: 155 NG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQLMAKLAEGAG 208
Query: 498 IATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECL 557
I P+ +A A + + AVP+ A+ + ++ + S+C
Sbjct: 209 IQL---------PSTAAAAAAAAAQAAALQLNGAVPLGALNPAALTALSPA-LNLASQCF 258
Query: 558 LLKNMFDP 565
L ++F P
Sbjct: 259 QLSSLFTP 266
>gi|221044666|dbj|BAH14010.1| unnamed protein product [Homo sapiens]
Length = 270
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 104/175 (59%), Gaps = 15/175 (8%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 379
Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G GP +
Sbjct: 41 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----R 94
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A L
Sbjct: 95 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 154
Query: 440 NGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL 493
NG E+ GR ++V VT+ + G D D + D G +A R LM KL
Sbjct: 155 NG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQLMAKL 203
>gi|145513991|ref|XP_001442906.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410267|emb|CAK75509.1| unnamed protein product [Paramecium tetraurelia]
Length = 545
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 150/631 (23%), Positives = 289/631 (45%), Gaps = 129/631 (20%)
Query: 51 EEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRE 110
E+ ++ + +++ + ++ G+ +DRDR D++K++H +D +R+R+R RER+++ +R+R+
Sbjct: 9 EQFQRYIQSENTQQQKHDQKGNEKDRDRGHDKNKDKHYKDNNRERERERERDKDKDRERD 68
Query: 111 RS---RERREKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSR----SR 163
+S +++++ EK+ +++ R + ++++ + + + + +Q + +S+ S
Sbjct: 69 KSAEKKKKKKDEKKDKKKRSRSASRSSKKKKSKKDKEREKDKDKDNQQQVITSQLLMTSD 128
Query: 164 RERERESERERELEL-ERE-RERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQR 221
+++RE ++R++E+ E E RE ER++ E ER+LE + R
Sbjct: 129 IQKKREIAKQRKIEIMEAEIRELERKIVEVERELE------------------EAHRQDL 170
Query: 222 TVFAYQMPLKATERDVYEFFS--KAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHS 279
TV Y +PLKA E+ +Y+FF GK+RD+R+I D+ S RS+GV
Sbjct: 171 TVLMYCLPLKAKEKHIYQFFQTFNCGKIRDIRIIRDQKSGRSRGVA-------------- 216
Query: 280 CLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSG 339
++F+ + M L D + + G
Sbjct: 217 -------YVEFYQEESIPMA-LALNDRLFI---------------------------MDG 241
Query: 340 QLLLGQPVMVKPSEAEKN---------------------LVQSNTSAGGTATGPYGAIDR 378
Q + PV ++ S+AEKN L N A TG + R
Sbjct: 242 QQVGTIPVKIQLSQAEKNRAARDQKNMQIKQNKLQNIQDLQNMNGPARVQITGMAEQLQR 301
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
+ E +R+ F PFG +E V++P D E+G+ G +V + + E A+
Sbjct: 302 ----------INEEDIREAFVPFGTIETVEIPKD-ESGRMTGVLYVTYEKAESARNMIEV 350
Query: 439 LNGK-LEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTG 497
+N + + G+ +KV V+ D DDD L N R LM+KL
Sbjct: 351 INNQPFLLNGKPIKVQLVSGANNYMD-----LQLDDD----LVQNPVMRITLMKKL---- 397
Query: 498 IATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTA--PVIPNMAAEFIGSPSE 555
+ S+ ++ + P + + Q I L ++ P + ++ P+ N A ++
Sbjct: 398 MDDSLIDNINLPPLMTQLGLTVQRI-LNIIQSPNPTLGCISGWMPLKHNPPA--CPCTTK 454
Query: 556 CLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAA 615
++L NM+ ++ +E++ +VE EC KYG V+ ++VDK++ G V + F+ EAA
Sbjct: 455 VIVLTNMWTDLEISNQAAIVELKEEVENECKKYGDVEMVWVDKKNEGNVIIVFKQWEAAK 514
Query: 616 SAQRAMHMRWFARRLISAIFMKPEDYEAKFK 646
M+ R F +++ + F+ + + K
Sbjct: 515 QVNVLMNNRKFGNKIVQSYFITESQFMSIIK 545
>gi|313213471|emb|CBY37276.1| unnamed protein product [Oikopleura dioica]
gi|313236201|emb|CBY11524.1| unnamed protein product [Oikopleura dioica]
Length = 497
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 150/335 (44%), Gaps = 51/335 (15%)
Query: 318 VSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID 377
+ YIEF SVP+A+ L+GQ + G P++V+ S+AEKN + G
Sbjct: 194 IGIAYIEFKYSQSVPLALGLNGQPVNGIPIIVQQSQAEKNRHAQMVESAKQTLSKLGNGP 253
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 437
KL + NL ++E R++FEPFG ++ V+L D TG+ G GFV F+ + K A
Sbjct: 254 IKLKITNLIDEISEEMFRQIFEPFGRLDSVELIDDPITGKSAGSGFVTFSDSDAGKTALK 313
Query: 438 ALNGKLEIVGRTLKVSSVTDHV------GTQDTAAKSADFDDDDGGGLALNAQSRALLMQ 491
L+ + ++ G+ ++V SV D V +D A +FD G R LM
Sbjct: 314 ELD-RFDLGGKRIRV-SVVDKVISRNRDAKEDVKALEDNFDGSVG---------RIALMN 362
Query: 492 KLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIG 551
KL A +NQ+ PV A PV A+
Sbjct: 363 KL-----------------AARTDLLNQKE-EAPVPKPVAKPVQAIE------------- 391
Query: 552 SPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFES 610
+ C L NMF+P+ E ++ +I+ DV E S +G H++VDK S G V++ S
Sbjct: 392 --TRCFQLSNMFNPSKEKTGGWENDIRDDVILELSDHGGALHVHVDKFSKDGNVFVMALS 449
Query: 611 TEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
A A + +H +F ++I A ++ Y F
Sbjct: 450 PAVAQIASKKVHGNYFDGKMIQAAYIPEASYMELF 484
>gi|331242735|ref|XP_003334013.1| RNA-binding protein rsd1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 546
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 125/270 (46%), Gaps = 92/270 (34%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGN 275
E + R+VF Q+ + +R++++FF +AGKVRD RLI DR SRRSKGVG
Sbjct: 286 EHEMRSVFVSQLSARVGDRELFQFFEQQAGKVRDARLITDRISRRSKGVG---------- 335
Query: 276 TLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAI 335
V +R +E SV A+
Sbjct: 336 -----------------------------------------YVEFRELE-----SVQKAL 349
Query: 336 ALSGQLLLGQPVMVKPSEAEKN-----LVQSNTSAG--------------------GTAT 370
AL+G LLG PVMV+ +EAEKN Q N G G+A
Sbjct: 350 ALTGTKLLGLPVMVQYTEAEKNRQAMANTQPNVPPGFVATAPPPPVPRPYVAPKARGSAY 409
Query: 371 ----GPYGAID----RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFG 422
GP G D +LYVG+L+FN+T+ +R++F+PFG +E V L D TG+ KG+
Sbjct: 410 ELNRGP-GPNDPNSYARLYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKSKGYA 468
Query: 423 FVQFAQLEHAKAAQSALNGKLEIVGRTLKV 452
FVQF + AK A +NG ++ GR L+V
Sbjct: 469 FVQFKNMHDAKNAMEKMNG-FQLAGRALRV 497
>gi|361128675|gb|EHL00605.1| putative RNA-binding protein rsd1 [Glarea lozoyensis 74030]
Length = 694
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 154/332 (46%), Gaps = 73/332 (21%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y+EF + SVP AI L+GQ LLG P++ + +EAEKN N A G + P +LY
Sbjct: 394 YVEFKNEESVPAAIQLTGQKLLGIPIIAQLTEAEKNRQVRNPEAAG--SNPNSIPFHRLY 451
Query: 382 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 441
+FEPFG +E VQL + E G+ +G+GFVQF A+ A +NG
Sbjct: 452 --------------NVFEPFGELEFVQLQKE-EQGRSRGYGFVQFRDPNQAREALEKMNG 496
Query: 442 KLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQK-----LDRT 496
++ GR ++V D + TA+ L+Q+ +
Sbjct: 497 -FDLAGRPIRVGLGNDKFTPESTAS----------------------LLQRFQGQSHQQQ 533
Query: 497 GIATSIAGSLGVAP-AVNG-------------SAVNQQAISLPVVGQPAVPVPAVTAPVI 542
++ +G+ G P A NG SA A+ VG+ P V
Sbjct: 534 FQGSAFSGAGGRGPQAANGSNFDRAGGRDNDKSAGGASALDDTDVGESKPLPPGV----- 588
Query: 543 PNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSA 601
NMA S C++LK+MFDP + + D+ E++ +V E +KYG V HI +D S
Sbjct: 589 -NMA-------SRCVVLKHMFDPTGQDNDDWIKELEDEVRAEAEAKYGHVVHIAIDPNSD 640
Query: 602 GFVYLRFESTEAAASAQRAMHMRWFARRLISA 633
G +YL+F+ + +A + ++ R+F R I+A
Sbjct: 641 GDIYLKFDRVQGGENAIKGLNGRFFDGRTINA 672
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 199 ESRRYK--EKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDR 256
ESRR K+E P + ERD+RTVF Q+ + RD+ FF K G V++ +++ DR
Sbjct: 325 ESRRVSRSPKREATPPLTEDERDRRTVFVQQLAARLRTRDLIGFFEKVGPVKEAQIVKDR 384
Query: 257 NSRRSKGVG 265
S RSKGVG
Sbjct: 385 VSGRSKGVG 393
>gi|326438129|gb|EGD83699.1| hypothetical protein PTSG_04304 [Salpingoeca sp. ATCC 50818]
Length = 541
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 112/343 (32%), Positives = 163/343 (47%), Gaps = 38/343 (11%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 381
Y EF D SV +A++L+GQ L G P++V P+ AE+N A A A R +
Sbjct: 197 YAEFEDESSVTVALSLTGQRLKGAPLVVMPTMAERN-----RQAAEKAKQEQLARTR-VI 250
Query: 382 VGNLHFNM-TETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 440
V NL + E L KLF FG V+ L D + G+ G+G+V F + AK A + +N
Sbjct: 251 VENLPEKIEDEEALEKLFARFGRVKKGVLTKD-QFGRPLGYGYVVFGFAKDAKEAVTGMN 309
Query: 441 GKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRA--------LLMQK 492
G+ I + LKV+ D A + D L L +R L Q
Sbjct: 310 GQ-AIDDKVLKVTLAVD---ASPQLASQVNLDTQPKPNLPLPQPNRPNFRPNMSMPLGQA 365
Query: 493 LDRTGIATSIA-------GSLGVAPAVNGSAVNQQ--AISLPVVGQPAVPVPAVTAPVIP 543
+ I+ L AP + V Q AI+ + QP P P+ +P
Sbjct: 366 PAVPAVVPPISRPPLPMMAPLMPAPPMRPPGVPGQVPAITPMPMSQPTQPQPS-----LP 420
Query: 544 NMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-G 602
++ P+ L L NMFDPA ETDPD+ +++ +V E +KYG V HI+VDK + G
Sbjct: 421 GGVSQM---PTNFLKLSNMFDPAAETDPDWHEDVRDEVLEASTKYGPVFHIFVDKTAPQG 477
Query: 603 FVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
V+L+F+ + A+A A +AM+ R F R + A +MK Y +F
Sbjct: 478 QVFLKFKDSVASAQAYQAMNGRLFDGRTVKAEYMKETFYTTRF 520
>gi|320163233|gb|EFW40132.1| RNA binding domain-containing protein 39 [Capsaspora owczarzaki
ATCC 30864]
Length = 600
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 65/92 (70%)
Query: 554 SECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEA 613
++ LLLKNMFDPA E DP++ L+I+ V +EC K+G V HI+VD S GFV+++F S EA
Sbjct: 495 TQFLLLKNMFDPAQERDPEWQLDIRDTVLDECVKHGSVTHIFVDANSPGFVFIKFSSVEA 554
Query: 614 AASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+ QR MH RWFA +LI+A ++ Y A+F
Sbjct: 555 CIAVQRTMHGRWFAGKLITADYVPEPMYHARF 586
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 119/275 (43%), Gaps = 58/275 (21%)
Query: 217 ERDQR---TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDD 273
ERD+R TV +Q+P + ++ + FS+ G++RDV + DR R+ GV + +D
Sbjct: 186 ERDERLKNTVIVHQLPTNVRKHEIEQVFSECGEIRDVAIQSDRARGRAGGVAY-VEFKDF 244
Query: 274 GNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPM 333
+ ++S + ++ + PA ++ V + P
Sbjct: 245 AAVSKAMGLSSRRIDNIPMLVQA--------------TKPAAAALAMMGANAGGVSNTPA 290
Query: 334 AIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAI----------------- 376
AIA +PV + P+ A N+ ++G T Y +
Sbjct: 291 AIA--------RPVTLNPNSAAYNIATYQMNSGMTVQNVYHTMPLHSSAVHSAPLPAAPL 342
Query: 377 -----------DRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQ 425
++YVG+L F +TE ++ LF P G E++ + L+ + G+ KG+ FVQ
Sbjct: 343 GTAAIAMAAKQQTRVYVGSLDFALTEADVKSLFSPCG--EVISVTLNRDNGKSKGYAFVQ 400
Query: 426 FAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVG 460
FA AK A LNG +E+ GR LKV+ TD G
Sbjct: 401 FADAGAAKLAME-LNG-VEVAGRPLKVNFATDPEG 433
>gi|297721815|ref|NP_001173271.1| Os03g0153000 [Oryza sativa Japonica Group]
gi|255674214|dbj|BAH91999.1| Os03g0153000, partial [Oryza sativa Japonica Group]
Length = 103
Score = 108 bits (270), Expect = 9e-21, Method: Composition-based stats.
Identities = 59/77 (76%), Positives = 64/77 (83%), Gaps = 4/77 (5%)
Query: 321 RYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKL 380
RYIEFYDVMSVPMAIALSGQLLLGQ VMVKPSEAEKNLVQSN S+ G A+ RKL
Sbjct: 9 RYIEFYDVMSVPMAIALSGQLLLGQQVMVKPSEAEKNLVQSNASSSGAAS----GGARKL 64
Query: 381 YVGNLHFNMTETQLRKL 397
YVGNLH N+TE QLR++
Sbjct: 65 YVGNLHSNITEDQLRQV 81
>gi|146197845|dbj|BAF57634.1| rnpc2 protein [Dugesia japonica]
Length = 278
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 143/315 (45%), Gaps = 58/315 (18%)
Query: 334 AIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAI--DRKLYVGNLHFNMTE 391
A+ L+GQ L+G P+ ++ +EK +A GT Y KL V NLH + E
Sbjct: 5 ALDLNGQKLMGVPIQIRTVSSEKC-----RAAEGTMNSSYIYFRGPTKLCVSNLHPQINE 59
Query: 392 TQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLK 451
+ ++F P+G ++ ++L DI G G F+ F + E+AK +N + G+ LK
Sbjct: 60 QMIEEIFSPYGKIDELRLMKDIR-GTSLGTAFILFRKGENAKNVVEQMN-DFNLAGQLLK 117
Query: 452 VSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPA 511
++ V + G + F ++ G +++ A R LM KL ++ L V P
Sbjct: 118 IAPVVEEGGLNE-------FGENQG--VSMTAADRLGLMAKL-------AVGTGLQVVPK 161
Query: 512 VNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDP 571
N +V AP+I S+C +L NMFD D
Sbjct: 162 AN----------------------SVQAPIIN----------SQCFVLSNMFDVKDAHDD 189
Query: 572 DFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRL 630
F E+Q DV EC+++G V H+++D++S G +Y++ S A +H R F RL
Sbjct: 190 KFCKEVQDDVVGECNQFGGVYHVHIDRKSPRGEIYVKCPSIYVANKCVSTLHGRSFDGRL 249
Query: 631 ISAIFMKPEDYEAKF 645
I+A ++ E Y F
Sbjct: 250 ITANYIPLEHYHKMF 264
>gi|145494510|ref|XP_001433249.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400366|emb|CAK65852.1| unnamed protein product [Paramecium tetraurelia]
Length = 535
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 140/610 (22%), Positives = 273/610 (44%), Gaps = 117/610 (19%)
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEK 120
+S + + + N +DR D+++DK ++R+++R RER++ E+ +++ E+++K+K
Sbjct: 19 QSYKHDSKLNDKEKDRGHDKNKDKHNRESHKEREKERERERDKSAEKKKKKKEEKKDKKK 78
Query: 121 ERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELE-LE 179
+ ++K+ ++++D E+ + ++Q ++ ++ RE ++R++E +E
Sbjct: 79 RSRSASKSSKKKKSKKDKDREKEKEQHQQAITTQILMTNDIQKK---REIAKQRKIEIME 135
Query: 180 RE-RERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVY 238
E RE ER++ E ER+LE + R TV Y +PLKA E+ +Y
Sbjct: 136 AEIRELERKIVEVERELE------------------EAHRQDLTVLMYCLPLKAKEKHIY 177
Query: 239 EFFS--KAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEV 296
+FF GK+RD+R+I D+ S RS+GV ++F+ +
Sbjct: 178 QFFQTFNCGKIRDIRIIRDQKSGRSRGVA---------------------YVEFYQEESI 216
Query: 297 GMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEK 356
M L D + + GQ + PV ++ S+AEK
Sbjct: 217 PMA-LALNDRLFI---------------------------MDGQQVGTIPVKIQLSQAEK 248
Query: 357 N-----------------LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFE 399
N +Q + G A + +L + E +R+ F
Sbjct: 249 NRAARDQKNMQIKQNKLQSIQDLQNMNGPARVQITGMAEQLQ------KINEEDIREAFV 302
Query: 400 PFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIV-GRTLKVSSVTDH 458
PFG ++ V++P D E G+ G +V + + E A+ +N + ++ G+ +KV V+
Sbjct: 303 PFGTIDTVEIPKD-EQGRMTGVLYVTYEKAESARNMIEVINNQQFLLNGKPIKVQLVSGA 361
Query: 459 VGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVN 518
D DDD L N R LM+KL + ++ ++ + P ++ +
Sbjct: 362 NNYMDL-----QLDDD----LVQNPVMRITLMKKL----MDDNLIDNINLPPLMSQLGLT 408
Query: 519 QQAISLPVVGQPAVPVPAVTA--PVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLE 576
Q I L ++ P + ++ P+ N A ++ ++L NM+ ++ +E
Sbjct: 409 VQRI-LNIIQSPNPSLGCISGWMPLKHNPPA--CPCITKVIVLTNMWTDLEISNQAAIVE 465
Query: 577 IQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFM 636
++ +VE EC KYG ++ ++VDK++ G V + F+ EAA M+ R F +++ + F+
Sbjct: 466 LKEEVENECKKYGEIEMVWVDKKNEGNVIVVFKQWEAAKQVNVLMNNRKFGNKVVQSYFI 525
Query: 637 KPEDYEAKFK 646
+ + K
Sbjct: 526 TESQFMSIIK 535
>gi|156087761|ref|XP_001611287.1| splicing factor, CC1-like family protein [Babesia bovis]
gi|154798541|gb|EDO07719.1| splicing factor, CC1-like family protein [Babesia bovis]
Length = 488
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 166/336 (49%), Gaps = 55/336 (16%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN-------LVQSNTSAGGTATGPYG 374
Y+EFY SV A+A++G L GQ + V+ S+AEKN ++Q T A P+
Sbjct: 189 YVEFYTQESVIKALAMNGFELNGQRIRVQSSQAEKNRAARAAKMIQQQTVE--VADSPF- 245
Query: 375 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 434
I G+L +++E ++R++F PFG + V++ D + G +++F + AK
Sbjct: 246 TIQVTGLTGSLS-SISEVEIRQMFSPFGNIISVEILRDPHSNLPLGQAYIKFKRTSEAKE 304
Query: 435 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFD----DDDGGGLALNAQSRALLM 490
A +A+NG +I G+T+KV+ T + + + D D+DGGGL A ++ LM
Sbjct: 305 AVTAMNG-FDIGGQTIKVAYATG-ASAKGRLSTHGEVDIERLDEDGGGLISGATNKIALM 362
Query: 491 QKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFI 550
KL RT T+ S G + N S ++ +
Sbjct: 363 HKLQRTSSDTNSHLSSGSSGDTN-SGISSK------------------------------ 391
Query: 551 GSPSECLLLKNMF---DPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYL 606
P+ + L NMF DP++ ++P F E++ DV EEC+KYG+V +Y+++ G V++
Sbjct: 392 --PTCNITLSNMFSSSDPSV-SEPTFFDEVEEDVNEECNKYGKVLKVYINRGVIDGKVWV 448
Query: 607 RFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYE 642
+F + + A R+++ R FA I A ++ E ++
Sbjct: 449 KFGNVVDSTVAFRSLNGRVFAGNTIKAEYVTDEYWQ 484
>gi|294932839|ref|XP_002780467.1| RNA-binding region-containing protein, putative [Perkinsus marinus
ATCC 50983]
gi|239890401|gb|EER12262.1| RNA-binding region-containing protein, putative [Perkinsus marinus
ATCC 50983]
Length = 571
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 180/396 (45%), Gaps = 73/396 (18%)
Query: 291 FLVAEVGM------VFFLLGDETYTVLDPATV-------LVSYRYIEFYDVMSVPMAIAL 337
L+A++GM V+ ++ + V D + Y+EF D S A+ +
Sbjct: 208 VLIAQLGMDVTDRTVYLVMSKQAGKVRDVQIIRDGRSQRSKGIAYVEFEDQNSAVKALGI 267
Query: 338 SGQLL---LGQPVMVKPSEAEKNLVQSNTSAGGTATGPYG--AIDRKLYVG---NLHFNM 389
L LG ++PS+AE+NL S + + YG + +LYVG NL ++
Sbjct: 268 EPTSLWTKLGHGANIQPSQAERNLYPSQS-----VSNAYGERVNECRLYVGGSANLVADL 322
Query: 390 TETQLRKLFEPFGPVELV-QLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGR 448
+E LR LF+PFGP++ V + P + G+ + FVQ+ EHA++A L+G + I G+
Sbjct: 323 SEDDLRALFQPFGPLDFVDRHPRN--QGEGGTYAFVQYGDSEHARSALKGLSGMM-IGGK 379
Query: 449 TLKVSSVTDHVGTQDTAAK-----SADFD---DDDGG-----GLALNAQSRALLMQKLDR 495
LKV T +++ + D D D++ G GL + SRA LM+ + R
Sbjct: 380 ELKVGMATSAASAGLSSSSVVVGANTDLDLVEDNEEGPSTHTGLLKDNLSRARLMRAMVR 439
Query: 496 TGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSE 555
IA S + + A LP + + + G+ S
Sbjct: 440 EPIAE------------GSSLLMKSATRLPA------------SNLASAASGAATGTGSR 475
Query: 556 CLLLKNMF---DPAM-ETDPD-FDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFE 609
L+L+N++ D M E P+ F EI DV+ E ++G + ++D+ S G +L+F
Sbjct: 476 VLILRNLWAAGDQLMNEGGPEKFFKEITDDVKSEAKRFGTITGCWLDEASENGDCWLKFT 535
Query: 610 STEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+ AAA ++ RWFA R + A+ + + +EA
Sbjct: 536 TGAAAAKCSLGLNRRWFAGRQLVAVIVSEDKWEAGL 571
>gi|66810518|ref|XP_638966.1| hypothetical protein DDB_G0283687 [Dictyostelium discoideum AX4]
gi|60467589|gb|EAL65610.1| hypothetical protein DDB_G0283687 [Dictyostelium discoideum AX4]
Length = 727
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Query: 458 HVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAV 517
H ++ A S D DD GG+ L A RALL KL + T + +L N + +
Sbjct: 545 HTFKENNALSSLDEDD---GGIPLTAHGRALLTAKLQGKTL-TPPSNNLNNNINNNNNNI 600
Query: 518 NQQAISLPVVGQPAVPVPAVTAPV--IPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDL 575
N S V P++ + P +P+ A F+ S CL+L+NMFDP ET+ ++D
Sbjct: 601 NNLNNSTHTVINPSLASTGIITPYTQLPHFA--FV---STCLILRNMFDPETETEENWDQ 655
Query: 576 EIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIF 635
+I + ECS +G++ HIY+DK + G +Y+R+++ E+ A + +H RWF+++ I A
Sbjct: 656 DILSETHAECSTFGKIMHIYLDKNTKGCIYIRYDNNESPLKAIQKLHGRWFSKKQIIAEL 715
Query: 636 MKPEDYEAKF 645
+ Y+ +F
Sbjct: 716 VPEPVYKLQF 725
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 115/245 (46%), Gaps = 67/245 (27%)
Query: 212 PEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMR 271
PE D E DQRTVF ++ E+D+ + FS+AG V +VRLI D+ ++R KGVG
Sbjct: 257 PEPDEESDQRTVFVSKLSQNIVEKDLSDLFSQAGTVLNVRLITDKVTKRMKGVG------ 310
Query: 272 DDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSV 331
++F V L G +VLD +LV
Sbjct: 311 ---------------YVEFSQKEMVDKAIALSG----SVLDGQQILVH------------ 339
Query: 332 PMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTE 391
++P EK +++SN +TG G + ++YVG +H ++ E
Sbjct: 340 ----------------SIQP---EKKVIKSN------STGSSGG-ESRIYVGYIHLSVAE 373
Query: 392 TQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLK 451
Q+R +F+P+G ++ + + + G K + F+QF E AK A + LNG E++G+ LK
Sbjct: 374 EQIRVIFQPYGDIDFIN--IHTKPGISK-YAFIQFKTQESAKRAITELNG-YELMGKNLK 429
Query: 452 VSSVT 456
++ V+
Sbjct: 430 LNMVS 434
>gi|145509627|ref|XP_001440752.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407980|emb|CAK73355.1| unnamed protein product [Paramecium tetraurelia]
Length = 533
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 136/606 (22%), Positives = 266/606 (43%), Gaps = 114/606 (18%)
Query: 81 DRDKERHRRDRDRDRDRGRERE-RETERDRERSRERREKEKERERRERRDREKERERERD 139
D D E+ +R + G++ + + E+++ER E+ K+K R ++RE+ERER++
Sbjct: 2 DLDFEQFQRYIQSEHHHGQKHDSKLNEKEKERGHEKN-KDKHNNRESHKERERERERDKS 60
Query: 140 GERRSSSRSRRSSSQSRRSSSRSRRERERESERERELE--------------LERERERE 185
E++ + + + R S+ ++++ + + + + + +++
Sbjct: 61 AEKKKKKKDEKKDKKKRSRSASKSSKKKKSKKDKDREKDKEQQQQTITTQILMTNDIQKK 120
Query: 186 RELRERERDLEMRESRRYKEKKEVVEPEADPERDQR---TVFAYQMPLKATERDVYEFFS 242
RE+ ++R +E+ E+ + ++++VE E + E R TV Y +PLKA E+ +Y+FF
Sbjct: 121 REI-AKQRKIEIMEAEIRELERKIVEVERELEEAHRQDLTVLMYCLPLKAKEKHIYQFFQ 179
Query: 243 --KAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVF 300
GK+RD+R+I D+ S RS+GV ++F+ + M
Sbjct: 180 TFNCGKIRDIRIIRDQKSGRSRGVA---------------------YVEFYQEESIPMA- 217
Query: 301 FLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--- 357
L D + + GQ + PV ++ S+AEKN
Sbjct: 218 LALNDRLFI---------------------------MDGQQVGTIPVKIQLSQAEKNRAA 250
Query: 358 --------------LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGP 403
+Q + G A + +L + E +R+ F PFG
Sbjct: 251 RDQKNMQIKQNKLQSIQDLQNMNGPARVQITGMAEQLQ------KINEEDIREAFVPFGT 304
Query: 404 VELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIV-GRTLKVSSVTDHVGTQ 462
++ V++P D E G+ G +V + + E A+ +N + ++ G+ +KV V+
Sbjct: 305 IDTVEIPKD-EQGRMTGVLYVTYEKAESARNMIEVINNQQFLLNGKPIKVQLVSGANNYM 363
Query: 463 DTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAI 522
D DDD L N R LM+KL + ++ ++ + P + + Q I
Sbjct: 364 DL-----QLDDD----LVQNPVMRITLMKKL----MDDNLIDNINLPPLMTQLGLTVQRI 410
Query: 523 SLPVVGQPAVPVPAVTA--PVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGD 580
L ++ P + ++ P+ N A ++ ++L NM+ ++ +E++ +
Sbjct: 411 -LNIIQSPNPSLGCISGWMPLKHNPPA--CPCITKVIVLTNMWTELEISNQAAIVELKEE 467
Query: 581 VEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPED 640
VE EC KYG V+ ++VDK++ G V + F+ EAA M+ R F +++ + F+
Sbjct: 468 VENECKKYGDVEMVWVDKKNEGNVIVVFKQWEAAKQVNVLMNNRKFGNKVVQSYFITESQ 527
Query: 641 YEAKFK 646
+ + K
Sbjct: 528 FMSIIK 533
>gi|298708815|emb|CBJ30774.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 604
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 552 SPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKR-SAGFVYLRFES 610
+P+ CLL+KNMFDPA ETD ++L+I+ ++EEECSK+G V H YV+ R G VY+ F +
Sbjct: 493 TPTFCLLVKNMFDPATETDEGWELDIKEEMEEECSKHGAVMHSYVESRQPGGLVYVMFST 552
Query: 611 TEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
T AA ++ ++ RWFA R++ ++ P+ Y AKF
Sbjct: 553 TGAAVASAEMLNGRWFAGRMVLVEYLNPKVYTAKF 587
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 151/350 (43%), Gaps = 92/350 (26%)
Query: 218 RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTL 277
RDQRTVF Q+ +K TE D+ ++F G+V +V ++ D+ + R K G+A MR
Sbjct: 77 RDQRTVFVNQLTMKVTEDDLAKYFGLLGEVNNVIMLRDKFTSRHKDGGDA--MRGRALPR 134
Query: 278 HSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIAL 337
H + Y+E + SVP+ + L
Sbjct: 135 HK---------------------------------------GFAYVEMKSLESVPVVLQL 155
Query: 338 SGQLLLGQ--PVMVKPSEAEKNLV-----QSNTSAGGTATGPYGAI-DRKLYVGNLHFNM 389
+ ++ Q PVMVK SEAEKN + ++ G G A+ KL++GNLH N+
Sbjct: 156 NERVPDFQKFPVMVKASEAEKNYLAKQEEKAKNPTGHVILGNAAALAGLKLHIGNLHQNI 215
Query: 390 TETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRT 449
TE L ++ FG V + L D E G+ K F FV +A E A L+G LE+ G+
Sbjct: 216 TEDDLGEICRSFGEVTQLILHRD-EAGESKRFAFVTYADTESTNACLEKLDG-LEVAGKA 273
Query: 450 LKVS-------SVTDHV---------------------------GTQDTAAKS-ADFDDD 474
L VS S+ ++ G Q TAA S DDD
Sbjct: 274 LSVSYCKADPKSIPKNLDANVTATAAAAAAATAHAASLAAATTAGQQSTAASSNWKLDDD 333
Query: 475 DG-GGLALNAQSRALLMQKLDRTGIATSIAGSLGVA-----PAVNGSAVN 518
+G GG+ +++ +RA +M + + +AG G+ P ++G+ +
Sbjct: 334 EGAGGVKMDSTNRANIMSRFGGAAMNMGLAGIPGMMNHATLPGMSGTGMG 383
>gi|403222792|dbj|BAM40923.1| RNA splicing factor [Theileria orientalis strain Shintoku]
Length = 649
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 152/338 (44%), Gaps = 71/338 (21%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLV-----QSNTSAGGTATGPYGAI 376
Y+EFY SV A++++G L GQ + V+ S+AEKN Q +A A P +
Sbjct: 371 YVEFYTQESVIKALSMNGMSLKGQGIRVQSSQAEKNRAARAAKQLQENALKEADNPTTVM 430
Query: 377 DRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQ 436
L VG L N++E L++LF PFG V V + + + G KG+ +V+F + A+ A
Sbjct: 431 VSNL-VGVLS-NLSEGDLQQLFAPFGNVAEVAVARN-DLGLSKGYAYVRFKRWTEAREAL 487
Query: 437 SALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFD----DDDGGGLALNAQSRALLMQ 491
+ +NG +I G+ +KVS VT + G + D D DD+ GL + ++ LM+
Sbjct: 488 NVMNG-FDISGQPIKVSYVTSNKRGRGSRLNELGDLDIERLDDEEAGLISGSSNKIALMK 546
Query: 492 KLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIG 551
KL QQ ++ AA +
Sbjct: 547 KL-------------------------QQRVN----------------------AANIV- 558
Query: 552 SPSECLLLKNMFDPAMETD-PDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFE 609
L NM+ D DF EI+ DV EEC KYG V +Y+++R G VY++F
Sbjct: 559 -------LSNMYTSEDYADNNDFFDEIEDDVREECKKYGEVVKVYLNRRKPDGKVYVKFR 611
Query: 610 STEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKFKS 647
S A +A +++ R+FA I ++ + + + S
Sbjct: 612 SNTDAQTAHKSLQGRYFAGNTIQVGYLSDDQFNSLLGS 649
>gi|328866609|gb|EGG14992.1| putative RNA splicing factor [Dictyostelium fasciculatum]
Length = 637
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 67/93 (72%)
Query: 553 PSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTE 612
PS C++LKNMFDP ET ++ EIQ DVEEEC+ +G +KHI++D+ S G++YL++++++
Sbjct: 539 PSPCMVLKNMFDPDSETGDEWPQEIQKDVEEECTNFGNIKHIFLDRYSQGYIYLKYDNSD 598
Query: 613 AAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
AA A ++ RWF+ +++SA F+ Y KF
Sbjct: 599 MAALAISKLNRRWFSSKMLSAEFIPETIYYQKF 631
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 81/156 (51%), Gaps = 25/156 (16%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEK-----------------NLVQSN-- 362
Y+EF + V A+ L+GQ +LG + V + EK +L+ +N
Sbjct: 226 YVEFKEKDMVDEAVKLTGQKVLGHTIAVHRVQPEKKSTATTIIGATTAMDATSLMATNAD 285
Query: 363 -TSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGF 421
T+ T A + +LYVG L+ MTE Q+R LF P+G V+ + + I+ G K +
Sbjct: 286 PTTLKNNTTSTV-AHNSRLYVGFLNLGMTEEQIRALFVPYGEVDFIN--VHIKPGIYK-Y 341
Query: 422 GFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTD 457
FVQF E A A + LNGK +++G+ LK++ V++
Sbjct: 342 AFVQFRTSEAAARAHADLNGK-DLLGKPLKITFVSE 376
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 219 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG 265
D RT F + K E D+Y+FF++AGKV V L++DR +R+ KGVG
Sbjct: 179 DLRTAFIQNLSPKVHESDLYDFFAQAGKVVKVSLVVDRITRKLKGVG 225
>gi|85001331|ref|XP_955384.1| RNA splicing factor [Theileria annulata strain Ankara]
gi|65303530|emb|CAI75908.1| RNA splicing factor, putative [Theileria annulata]
Length = 643
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 150/333 (45%), Gaps = 70/333 (21%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLV-----QSNTSAGGTATGPYGAI 376
Y+EFY SV A++++G + GQ + V S+AEKN Q +A + P +
Sbjct: 363 YVEFYTQESVIKALSMTGMSMKGQGIRVHSSQAEKNRAAKAAKQLQDNALKESDNPTTIV 422
Query: 377 DRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQ 436
L +G L + + E +L +LF PFG + V L + G+ KG+ +++F + AK A
Sbjct: 423 VSNL-LGVLSY-LNEIELNQLFSPFGNIIDVALAR-TDNGESKGYAYIRFKRWNEAKEAL 479
Query: 437 SALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFD----DDDGGGLALNAQSRALLMQK 492
+ +NG +I G+ +KV+ + D D DDD GL + + LM+K
Sbjct: 480 NVMNG-FDINGQQIKVAYANTRKDPKSRLHSLGDLDMERLDDDDAGLISGSNVKIALMKK 538
Query: 493 LDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNM--AAEFI 550
L Q P+ + + V+ NM +A++
Sbjct: 539 L-----------------------------------QQRQPLNS-SNLVLSNMYTSADYA 562
Query: 551 GSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFE 609
+ FD EI+ DV+EEC KYG V ++V++R+ G VY++F+
Sbjct: 563 DNHE-------FFD-----------EIEEDVKEECGKYGTVVQVFVNRRNPDGKVYVKFK 604
Query: 610 STEAAASAQRAMHMRWFARRLISAIFMKPEDYE 642
+ + A SA +++ R+FA I ++ + Y+
Sbjct: 605 NNDDAQSANKSLQGRYFAGNTIQVSYISDDQYQ 637
>gi|71026268|ref|XP_762815.1| splicing factor [Theileria parva strain Muguga]
gi|68349767|gb|EAN30532.1| splicing factor, putative [Theileria parva]
Length = 644
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 151/333 (45%), Gaps = 70/333 (21%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLV-----QSNTSAGGTATGPYGAI 376
Y+EFY SV A++++G + GQ + V S+AEKN Q +A + P +
Sbjct: 364 YVEFYTQESVIKALSMTGMSMKGQGIRVHSSQAEKNRAAKAQKQLQDNALKESDNPTTIV 423
Query: 377 DRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQ 436
L +G L + + E +L +LF PFG + V L + G KG+ +++F + AK A
Sbjct: 424 VSNL-LGVLSY-LNEIELNQLFSPFGNIIDVALAR-TDDGNSKGYAYIRFKRWNEAKEAL 480
Query: 437 SALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFD----DDDGGGLALNAQSRALLMQK 492
+ +NG +I G+ +KV+ ++ D D DDD GL + + LM+K
Sbjct: 481 NVMNG-FDINGQQIKVAYANTRKDSKSRLHSLGDVDMERLDDDDAGLISGSNIKIALMKK 539
Query: 493 LDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNM--AAEFI 550
L Q P+ + + V+ NM +A++
Sbjct: 540 L-----------------------------------QQRQPLNS-SNLVLSNMYTSADY- 562
Query: 551 GSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFE 609
E + +F EI+ DV+EEC KYG V ++V+KR+ G VY++F+
Sbjct: 563 -----------------EDNREFFDEIEEDVKEECGKYGTVIQVFVNKRNPDGKVYVKFK 605
Query: 610 STEAAASAQRAMHMRWFARRLISAIFMKPEDYE 642
+ + A +A +++ R+FA I ++ + Y+
Sbjct: 606 NNDDAQAANKSLQGRYFAGNTIQVSYISDDQYQ 638
>gi|240274521|gb|EER38037.1| RNA splicing factor [Ajellomyces capsulatus H143]
Length = 537
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 128/311 (41%), Gaps = 81/311 (26%)
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKG------FGFVQFAQLEH 431
R ++V L + +L FE GPV+ Q+ D +G+ KG +GFVQF
Sbjct: 235 RTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGRGRSRGYGFVQFRDPNQ 294
Query: 432 AKAAQSALNGKLEIVGRTLKV------------------------------SSVTDHVGT 461
A+ A +NG ++ GR ++V S + H G
Sbjct: 295 AREALEKMNG-FDLAGRPIRVGLGNDKFTPESTANLLQRFQGQGAHHNFQGSLFSGHGGR 353
Query: 462 QDTAAKSADFD------------------DDDGGGLALNAQSRALLMQKLDRTGIATSIA 503
A S FD D D G+ N SR LM+KL RT
Sbjct: 354 GAQAGGSGHFDRAGGRDNDKAAGGASALDDTDVAGVNFNNYSRDALMRKLARTD------ 407
Query: 504 GSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMF 563
PA+ + ++ + P V +PV NMA S C+LL+NMF
Sbjct: 408 -----EPAIEPTPDEKRKVPKPQVNAKPLPVSV-------NMA-------SRCVLLRNMF 448
Query: 564 DPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMH 622
DPA E + E++ DV EC KYG V HI +D + G +YL+F+ + +A + ++
Sbjct: 449 DPAEEEGESWIKELEDDVRAECEDKYGHVVHIALDPNTQGDIYLKFDRVQGGENAIKGLN 508
Query: 623 MRWFARRLISA 633
R+F R ISA
Sbjct: 509 GRFFGGRQISA 519
>gi|302843264|ref|XP_002953174.1| hypothetical protein VOLCADRAFT_105799 [Volvox carteri f.
nagariensis]
gi|300261561|gb|EFJ45773.1| hypothetical protein VOLCADRAFT_105799 [Volvox carteri f.
nagariensis]
Length = 556
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 99/185 (53%), Gaps = 24/185 (12%)
Query: 472 DDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISL-PVVGQP 530
+D++GGG+ ++AQ R LM KL G A A V PA +AV +S+ PV+
Sbjct: 355 EDNEGGGIKMSAQGRVALMTKL--AGSAGLPAPPTSVLPAGVTNAVAHAVLSVDPVL--- 409
Query: 531 AVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPD---------FDLEIQGDV 581
+ V P P I +P CLLLKNMFD A E++ DV
Sbjct: 410 -LMQQGVLGPSSP------IATP--CLLLKNMFDAAASAGDAAAQNAAASVLAAEVEVDV 460
Query: 582 EEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDY 641
EECS++G + H++VD +S GFVYLRF +T++A +A RA+H RW++ R I A + Y
Sbjct: 461 REECSRFGELLHVWVDAKSKGFVYLRFATTQSAEAAHRALHGRWYSGRQILAEYQFMPLY 520
Query: 642 EAKFK 646
+ FK
Sbjct: 521 NSHFK 525
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 101/231 (43%), Gaps = 82/231 (35%)
Query: 221 RTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIMMRDDGNTLHSC 280
RTVFAY + L+A ERD++EFFSK G+V D+RLI D+N+++S+G+
Sbjct: 79 RTVFAYNLSLRADERDIFEFFSKVGRVVDIRLITDKNTKKSRGLAY-------------- 124
Query: 281 LINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALSGQ 340
++F V EV L G+
Sbjct: 125 -------VEFSKVEEVISAVALTGN----------------------------------- 142
Query: 341 LLLGQPVMVKPSEAEKNL----------------------VQSNTSAGGTATGPY---GA 375
+L GQPVMVK SEAEKN+ + S+T +GG T G
Sbjct: 143 ILKGQPVMVKASEAEKNMAWEAAQQQKHSAQAATHQLLSSLASSTGSGGKGTNQVALAGN 202
Query: 376 IDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF 426
L V NL + E ++++LF PFG +E VQL D TG+ G +++F
Sbjct: 203 GPCWLQVSNLVKELGEAEVQQLFAPFGKLEAVQLRRD-ATGRSTGIAYLKF 252
>gi|294881541|ref|XP_002769399.1| RNA-binding protein rsd1, putative [Perkinsus marinus ATCC 50983]
gi|239872808|gb|EER02117.1| RNA-binding protein rsd1, putative [Perkinsus marinus ATCC 50983]
Length = 629
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 180/397 (45%), Gaps = 72/397 (18%)
Query: 289 KFFLVAEVGM------VFFLLGDETYTVLDPATV-------LVSYRYIEFYDVMSVPMAI 335
+ L+A++GM V+ L+ V D + Y+EF + S A+
Sbjct: 265 RTVLIAQLGMDVSDRTVYLLMSKMAGKVRDVQIIRDGRSQRSKGIAYVEFEEQESAMKAL 324
Query: 336 ALSGQLL---LGQPVMVKPSEAEKNLVQSNTSAGGTATGPYG--AIDRKLYVG---NLHF 387
+ L LG ++PS+AEKNL ++T A P G + +LYVG NL
Sbjct: 325 GIEPTSLWTRLGHGANIQPSQAEKNL--NSTQA---VLNPSGERVNECRLYVGGSANLVA 379
Query: 388 NMTETQLRKLFEPFGPVELV-QLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIV 446
+++E LR LF+PFGP++ V + P + G+ + FVQ+ +HA++A L+G + I
Sbjct: 380 DLSEDDLRALFQPFGPLDFVDRHPRN--QGEGGTYAFVQYGDSDHARSALKGLSGMM-IG 436
Query: 447 GRTLKVSSVTDHVGTQD----TAAKSADFD---DDDGG-----GLALNAQSRALLMQKLD 494
G+ LKV T + D D D++ G GL + SRA LM+ +
Sbjct: 437 GKELKVGMATSAASAGLASSVVVGPNTDLDLVEDNEEGPSTHTGLLKDNLSRARLMRAMV 496
Query: 495 RTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPS 554
R P GS++ ++ S +PA + + + G+ S
Sbjct: 497 RE-------------PISEGSSLLMKSASR---------LPA--SNLASAASGAATGTGS 532
Query: 555 ECLLLKNMF---DPAM-ETDPD-FDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRF 608
L+L+N++ D M E P+ F EI DV+ E ++G + ++D+ S G +LRF
Sbjct: 533 RVLILRNLWAAGDQLMHEGGPEKFFKEITNDVKSEAVRFGTIVGCWLDEASENGDCWLRF 592
Query: 609 ESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+ AAA ++ RWFA R + A+ + + ++
Sbjct: 593 TTGSAAAKCALGLNRRWFAGRQLVAVVVSEDKWDTGL 629
>gi|401888136|gb|EJT52101.1| hypothetical protein A1Q1_06639 [Trichosporon asahii var. asahii
CBS 2479]
gi|406699204|gb|EKD02415.1| hypothetical protein A1Q2_03307 [Trichosporon asahii var. asahii
CBS 8904]
Length = 612
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 132/512 (25%), Positives = 212/512 (41%), Gaps = 119/512 (23%)
Query: 147 RSRRSSSQSRRSSSRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEK 206
RS + Q S R RR S R+ +L E
Sbjct: 207 RSLELTLQRDYHSPRRRRG---SSARDEAADLLNE------------------------- 238
Query: 207 KEVVEPEADPERDQRTVFAYQMPLKATERDVYEFF-SKAG--KVRDVRLIMDRNSRRSKG 263
V+ EA R+VF Q+ D+ FF K G VRD R+I DR+SRRS+G
Sbjct: 239 ---VDSEA------RSVFVSQLAASLKSSDLGLFFEDKLGPRTVRDARIINDRHSRRSRG 289
Query: 264 VGNAIMMRDDGNTLHSCLINSCCVIKFFLVAEVGMVFFLLGDETYTVLDPATVLVSYRYI 323
+G + D L++ + +V + ++ T+ D ++ + +
Sbjct: 290 IGYVELASTD-------LVSKALALSGTIVMGIPILV--------TLTDASS---NPDGM 331
Query: 324 EFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVG 383
+++ A + + Q S ++ + + +A A PY +L++
Sbjct: 332 NLGAILATLKAERRERRERIQQRRFPPLSPGLQHRLGVDVNAHAEAALPY----HRLFIA 387
Query: 384 NLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKL 443
+L + +R++FEPFG +E V L D+ TG KG ++QFA+L A+ A A+N
Sbjct: 388 DLAEVLNAEDIRQVFEPFGEIEFVDLHTDV-TGTSKGTAYIQFAELNSAQMALDAMN-NF 445
Query: 444 EIVGRTLKVSSVTDHVGTQDTAAKSADFDDDD------GGGLALNAQSRALLMQKLDRTG 497
E+ +T+KV SV ++ +D++ G L+AQ R LM KL R
Sbjct: 446 ELADKTIKVMSV--------DPPRAPRIEDEERGGGNGRRGGRLDAQGRMDLMYKLARRE 497
Query: 498 IATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECL 557
+ S AP QQ + P + L
Sbjct: 498 NPDDSSRSRAPAP-------QQQERARP----------------------------TTFL 522
Query: 558 LLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRS-AGFVYLRFESTEAAA 615
L+ NMF+P ET+ ++D+++ DV+ E +KYG V I VDK S G VY+ F+ + A
Sbjct: 523 LVSNMFNPDEETERNWDIDLADDVKVEVENKYGHVARIKVDKMSNKGDVYIEFKDIDGAE 582
Query: 616 SAQRAMHMRWFARRLISAIFMKPEDYEAKFKS 647
AQR + R+F R ++A ++ E FKS
Sbjct: 583 RAQRGLQGRFFGGRSLTAQYIN----EGLFKS 610
>gi|294866432|ref|XP_002764713.1| RNA-binding protein rsd1, putative [Perkinsus marinus ATCC 50983]
gi|239864403|gb|EEQ97430.1| RNA-binding protein rsd1, putative [Perkinsus marinus ATCC 50983]
Length = 629
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 178/396 (44%), Gaps = 74/396 (18%)
Query: 291 FLVAEVGM------VFFLLGDETYTVLDPATV-------LVSYRYIEFYDVMSVPMAIAL 337
L+A++GM V+ L+ V D + Y+EF + S A+ +
Sbjct: 267 VLIAQLGMDVSDRTVYLLMSKMAGKVRDVQIIRDGRSQRSKGIAYVEFEEQESAMKALGI 326
Query: 338 SGQLL---LGQPVMVKPSEAEKNLVQSNTSAGGTATGPYG--AIDRKLYVG---NLHFNM 389
L LG ++PS+AEKNL ++T A P G + +LYVG NL ++
Sbjct: 327 EPTSLWTKLGHGANIQPSQAEKNL--NSTQA---VLNPSGERVNECRLYVGGSANLVADL 381
Query: 390 TETQLRKLFEPFGPVELV-QLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGR 448
+E LR LF+PFGP++ V + P + G+ + FVQ+ +HA++A L+G + I G+
Sbjct: 382 SEDDLRALFQPFGPLDFVDRHPRN--QGEGGTYAFVQYGDSDHARSALKGLSGMM-IGGK 438
Query: 449 TLKVSSVTDHVGTQD----TAAKSADFD---DDDGG-----GLALNAQSRALLMQKLDRT 496
LKV T + D D D++ G GL + SRA LM+ + R
Sbjct: 439 ELKVGMATSAASAGLASSVVVGPNTDLDLVEDNEEGPSTHTGLLKDNLSRARLMRAMVRE 498
Query: 497 GIATSIAGSLGVAPAVNGSAVNQQAIS-LPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSE 555
P GS++ ++ S LP + + + G+ S
Sbjct: 499 -------------PISEGSSLLMKSASRLPA------------SNLASAASGAATGTGSR 533
Query: 556 CLLLKNMF---DPAM-ETDPD-FDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFE 609
L+L+N++ D M E P+ F EI DV+ E ++G + ++D+ S G +LRF
Sbjct: 534 VLILRNLWAAGDQLMHEGGPEKFFKEITNDVKSEAVRFGTIVGCWLDEASENGDCWLRFT 593
Query: 610 STEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 645
+ AAA ++ RWFA R + A+ + + ++
Sbjct: 594 TGSAAAKCALGLNRRWFAGRQLVAVVVSEDKWDTGL 629
>gi|70938791|ref|XP_740024.1| splicing factor [Plasmodium chabaudi chabaudi]
gi|56517446|emb|CAH81784.1| splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 412
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 82/141 (58%), Gaps = 11/141 (7%)
Query: 322 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPY--GAIDRK 379
Y+EFY SV A+A +G +L +P+ V+ S+AEKN +A + P I K
Sbjct: 193 YVEFYTQESVIKALAANGYMLKNRPIKVQSSQAEKN-----RAAKASKHHPIDPNDIPLK 247
Query: 380 LYVGNLH---FNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQ 436
LY+G L N+TE +L++LF PFG + V++ D TG+ KGFGF+QF + A A
Sbjct: 248 LYIGGLLGPLSNITEQELKQLFNPFGDILEVEIHRDPYTGKSKGFGFIQFHKASEAIEAM 307
Query: 437 SALNGKLEIVGRTLKVSSVTD 457
+ +NG +E+ GR +KVS D
Sbjct: 308 TVMNG-MEVAGREIKVSYAQD 327
>gi|145501258|ref|XP_001436611.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403752|emb|CAK69214.1| unnamed protein product [Paramecium tetraurelia]
Length = 3975
Score = 89.0 bits (219), Expect = 8e-15, Method: Composition-based stats.
Identities = 40/219 (18%), Positives = 133/219 (60%), Gaps = 12/219 (5%)
Query: 14 EEQRQQKQDDDSSSKKKAKREEKSERS------YRKREDSEEEEEEEKSRSGKRSRRDED 67
+EQ +QKQ D +S K++ K++++ S +++E ++++E+ ++ + + S +++D
Sbjct: 563 KEQDKQKQQDRTSDKEQDKQKQQDRTSDNEQDKQKQQERTQDKEQNKQKQQDRTSDKEQD 622
Query: 68 EENGSRRDRDRDRDRDKERHR-RDRDRDRDRGRERERETERDRERSRER-----REKEKE 121
++ R D ++D+ K++ R +D+++++ + ++R + E+D+++ ++R ++K+K+
Sbjct: 623 KQKQQDRTSDNEQDKQKQQDRTQDKEQNKQKQQDRTSDNEQDKQQQQDRTQDKEQDKQKQ 682
Query: 122 RERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERE 181
++R ++++K+++++R + + ++ +Q + + + +++R ++E++++ + +R
Sbjct: 683 QDRTSDKEQDKQKQQDRTSDNEQDKQKQQDRTQDKEQNKQKQQDRTSDNEQDKQQQQDRT 742
Query: 182 RERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQ 220
+++E+ ++++ E R K + + E D ++ Q
Sbjct: 743 QDKEQNKQKQQDRTSDNEQDRQKSQDRTQDKEQDKQKQQ 781
Score = 84.7 bits (208), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/192 (20%), Positives = 120/192 (62%), Gaps = 3/192 (1%)
Query: 2 EFDEYEYLEKTVE-EQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
E D+ + E+T + EQ +QKQ D +S K++ K++++ S +++ ++++ + K
Sbjct: 592 EQDKQKQQERTQDKEQNKQKQQDRTSDKEQDKQKQQDRTSDNEQDKQKQQDRTQDKEQNK 651
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEK 120
+ ++D +N + + +DR +DKE+ ++ + +DR +E++++ ++DR E ++K+K
Sbjct: 652 QKQQDRTSDNEQDKQQQQDRTQDKEQDKQ-KQQDRTSDKEQDKQKQQDRTSDNE-QDKQK 709
Query: 121 ERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELER 180
+++R + +++ K+++++R + + ++ +Q + + + +++R ++E++R+ +R
Sbjct: 710 QQDRTQDKEQNKQKQQDRTSDNEQDKQQQQDRTQDKEQNKQKQQDRTSDNEQDRQKSQDR 769
Query: 181 ERERERELRERE 192
+++E++ ++++
Sbjct: 770 TQDKEQDKQKQQ 781
Score = 77.8 bits (190), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/214 (18%), Positives = 122/214 (57%), Gaps = 17/214 (7%)
Query: 19 QKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDR 78
+ QD + +K+ R E+ +K++D + E++K K+ R +D+E + + +
Sbjct: 559 RTQDKEQDKQKQQDRTSDKEQDKQKQQDRTSDNEQDKQ---KQQERTQDKEQN--KQKQQ 613
Query: 79 DRDRDKERHR---RDRDRDRDRGRERERETERDRERSRERRE-----KEKERERRERRDR 130
DR DKE+ + +DR D ++ ++++++ +D+E+++++++ E+++++++ R +
Sbjct: 614 DRTSDKEQDKQKQQDRTSDNEQDKQKQQDRTQDKEQNKQKQQDRTSDNEQDKQQQQDRTQ 673
Query: 131 EKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERER----ER 186
+KE+++++ +R S + Q R S + ++++++ +++E +++++R E+
Sbjct: 674 DKEQDKQKQQDRTSDKEQDKQKQQDRTSDNEQDKQKQQDRTQDKEQNKQKQQDRTSDNEQ 733
Query: 187 ELRERERDLEMRESRRYKEKKEVVEPEADPERDQ 220
+ ++++ + +E + K++ + E D ++ Q
Sbjct: 734 DKQQQQDRTQDKEQNKQKQQDRTSDNEQDRQKSQ 767
Score = 73.9 bits (180), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 122/208 (58%), Gaps = 6/208 (2%)
Query: 14 EEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSR 73
E R K ++K K++E+++ + R+ S++ ++++ + R +D+E +
Sbjct: 509 EINRHNKNSQQDKEQEKQKQQERTQDKEQDRQKSQDRTQDKQQDKQNQQDRTQDKEQDKQ 568
Query: 74 RDRDRDRDRDKERHRR-DRDRDRDRGRERERETERDRERSRERREKEKERERRERRDREK 132
+ +DR D+++++ ++ DR D ++ +++++E +D+E++ K+K+++R ++++K
Sbjct: 569 KQQDRTSDKEQDKQKQQDRTSDNEQDKQKQQERTQDKEQN-----KQKQQDRTSDKEQDK 623
Query: 133 ERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELRERE 192
+++++R + + ++ +Q + + + +++R ++E++++ + +R +++E++ ++++
Sbjct: 624 QKQQDRTSDNEQDKQKQQDRTQDKEQNKQKQQDRTSDNEQDKQQQQDRTQDKEQDKQKQQ 683
Query: 193 RDLEMRESRRYKEKKEVVEPEADPERDQ 220
+E + K++ + E D ++ Q
Sbjct: 684 DRTSDKEQDKQKQQDRTSDNEQDKQKQQ 711
Score = 71.2 bits (173), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 123/210 (58%), Gaps = 9/210 (4%)
Query: 20 K--QDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKR-SRRDEDEENGSRRDR 76
+ QD + +K R + ++ + ++D +++E++K + R S +++D++ R
Sbjct: 530 ERTQDKEQDRQKSQDRTQDKQQDKQNQQDRTQDKEQDKQKQQDRTSDKEQDKQKQQDRTS 589
Query: 77 DRDRDRDKERHR-RDRDRDRDRGRERERETERDRERSRER-----REKEKERERRERRDR 130
D ++D+ K++ R +D+++++ + ++R + E+D+++ ++R ++K+K+++R + +++
Sbjct: 590 DNEQDKQKQQERTQDKEQNKQKQQDRTSDKEQDKQKQQDRTSDNEQDKQKQQDRTQDKEQ 649
Query: 131 EKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELRE 190
K+++++R + + ++ +Q + + +++R + E++++ + +R + E++ ++
Sbjct: 650 NKQKQQDRTSDNEQDKQQQQDRTQDKEQDKQKQQDRTSDKEQDKQKQQDRTSDNEQDKQK 709
Query: 191 RERDLEMRESRRYKEKKEVVEPEADPERDQ 220
++ + +E + K++ + E D ++ Q
Sbjct: 710 QQDRTQDKEQNKQKQQDRTSDNEQDKQQQQ 739
Score = 60.8 bits (146), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 101/182 (55%), Gaps = 28/182 (15%)
Query: 64 RDEDEENGSRRDRDRDRDR----------------DKERHRR-------DRDRDRDRGRE 100
R +D+E +DR + +DR DKE+ ++ D+++D+ + ++
Sbjct: 531 RTQDKE----QDRQKSQDRTQDKQQDKQNQQDRTQDKEQDKQKQQDRTSDKEQDKQKQQD 586
Query: 101 RERETERDRERSRER-REKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSS 159
R + E+D+++ +ER ++KE+ +++++ R +KE+++++ +R S + + Q R
Sbjct: 587 RTSDNEQDKQKQQERTQDKEQNKQKQQDRTSDKEQDKQKQQDRTSDNEQDKQKQQDRTQD 646
Query: 160 SRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERD 219
++++++ + E + +++++R ++ + ++ + R S + ++K++ + +D E+D
Sbjct: 647 KEQNKQKQQDRTSDNEQDKQQQQDRTQDKEQDKQKQQDRTSDKEQDKQKQQDRTSDNEQD 706
Query: 220 QR 221
++
Sbjct: 707 KQ 708
Score = 60.1 bits (144), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 88/147 (59%), Gaps = 18/147 (12%)
Query: 14 EEQRQQKQDDDSSSKKKAK---------REEKSERSYRKREDSEEEEEEEKSRSGKRSRR 64
+EQ +QKQ D +S ++ K +E+ ++ + D E+++++++ R+
Sbjct: 647 KEQNKQKQQDRTSDNEQDKQQQQDRTQDKEQDKQKQQDRTSDKEQDKQKQQDRTS----- 701
Query: 65 DEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERER 124
D +++ ++DR +D++++K++ ++DR D ++ ++++++ +D+E++ ++K+++R
Sbjct: 702 DNEQDKQKQQDRTQDKEQNKQK-QQDRTSDNEQDKQQQQDRTQDKEQN---KQKQQDRTS 757
Query: 125 RERRDREKERERERDGERRSSSRSRRS 151
+DR+K ++R +D E+ + R+
Sbjct: 758 DNEQDRQKSQDRTQDKEQDKQKQQGRT 784
Score = 56.2 bits (134), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 106/169 (62%), Gaps = 6/169 (3%)
Query: 52 EEEKSRSGKRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRER 111
E+E +R K S++D+++E +++R +D+++D R + +DR + ++++++ ++DR +
Sbjct: 507 EQEINRHNKNSQQDKEQEKQKQQERTQDKEQD-----RQKSQDRTQDKQQDKQNQQDRTQ 561
Query: 112 SRERREKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESE 171
+E ++K+K+++R ++++K+++++R + + ++ +Q + + + +++R + E
Sbjct: 562 DKE-QDKQKQQDRTSDKEQDKQKQQDRTSDNEQDKQKQQERTQDKEQNKQKQQDRTSDKE 620
Query: 172 RERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQ 220
++++ + +R + E++ ++++ + +E + K++ + E D ++ Q
Sbjct: 621 QDKQKQQDRTSDNEQDKQKQQDRTQDKEQNKQKQQDRTSDNEQDKQQQQ 669
Score = 42.7 bits (99), Expect = 0.54, Method: Composition-based stats.
Identities = 49/272 (18%), Positives = 134/272 (49%), Gaps = 60/272 (22%)
Query: 3 FDEYEYLEKTVEEQRQQKQD--DDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
+DE E E T EQ + + D D+++S++ ++++K E+ +RE ++ E+E++K ++
Sbjct: 362 YDEPE--ECTTAEQTELELDPTDNNNSEQPQQQDDKDEQEV-EREQNQLEKEQDKEQN-- 416
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHRR------------------------------- 89
+DE+++N + R ++R ++K + RR
Sbjct: 417 -IEKDEEQDNNRIKKRIKNRIKNKIKSRRMIRIKNRRMNKMKNRKKNKKKIRKKKKKNRK 475
Query: 90 -DRDR----------DRDRGRER--------ERETERDRERSRERREKEKERERRERRDR 130
D R ++ R++ E+E R + S++ +E+EK++++ +D+
Sbjct: 476 VDHQRFLQMMMKSLLKENQQRQKVLELHLMVEQEINRHNKNSQQDKEQEKQKQQERTQDK 535
Query: 131 EKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERER--EREREL 188
E++R++ +D + + +++ +++++R S++E++ + +++R + E++
Sbjct: 536 EQDRQKSQDRTQDKQQDKQNQQDRTQDKEQDKQKQQDRTSDKEQDKQKQQDRTSDNEQDK 595
Query: 189 RERERDLEMRESRRYKEKKEVVEPEADPERDQ 220
++++ + +E + K++ + E D ++ Q
Sbjct: 596 QKQQERTQDKEQNKQKQQDRTSDKEQDKQKQQ 627
Score = 41.6 bits (96), Expect = 1.2, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 65/124 (52%), Gaps = 10/124 (8%)
Query: 14 EEQRQQKQDDDSSSKKKAKREEKSERSY---RKREDSEEEEEEEKSRSGKRSRRDEDEEN 70
EE+ +QK ++DS+ K RE ER + + +++ +E EE + D + N
Sbjct: 325 EEEDEQKLENDSNLDDKKPREIIIEREFGPDSEHQNNYDEPEECTTAEQTELELDPTDNN 384
Query: 71 GSRRDRDRDRDRDK---ERHRRDRDRDRDRGRERERETERDRERSRER---REKEKERER 124
S + + +D D+D+ ER + ++++D+ + E++ E+D R ++R R K K + R
Sbjct: 385 NSEQPQQQD-DKDEQEVEREQNQLEKEQDKEQNIEKDEEQDNNRIKKRIKNRIKNKIKSR 443
Query: 125 RERR 128
R R
Sbjct: 444 RMIR 447
Score = 38.9 bits (89), Expect = 9.2, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 118/275 (42%), Gaps = 62/275 (22%)
Query: 9 LEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEE-EEEEEKSRSGKRSRRDED 67
L+ T +Q Q D +++ +RE+ + +E + E +EE++ +R KR +
Sbjct: 378 LDPTDNNNSEQPQQQDDKDEQEVEREQNQLEKEQDKEQNIEKDEEQDNNRIKKRIKNRIK 437
Query: 68 EENGSRR--------------------------------DRDR-----DRDRDKERHRRD 90
+ SRR D R + KE +R
Sbjct: 438 NKIKSRRMIRIKNRRMNKMKNRKKNKKKIRKKKKKNRKVDHQRFLQMMMKSLLKENQQRQ 497
Query: 91 R--------DRDRDRGRERERETERDRERSRERREKEKERERRERRDR------------ 130
+ +++ +R + ++ + ++ ++ R ++KE++R++ +DR
Sbjct: 498 KVLELHLMVEQEINRHNKNSQQDKEQEKQKQQERTQDKEQDRQKSQDRTQDKQQDKQNQQ 557
Query: 131 ----EKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERER 186
+KE+++++ +R S + Q R S + +++++E +++E +++++R
Sbjct: 558 DRTQDKEQDKQKQQDRTSDKEQDKQKQQDRTSDNEQDKQKQQERTQDKEQNKQKQQDRTS 617
Query: 187 ELRERERDLEMRESRRYKEKKEVVEPEADPERDQR 221
+ + ++ + R S ++K++ + D E++++
Sbjct: 618 DKEQDKQKQQDRTSDNEQDKQKQQDRTQDKEQNKQ 652
>gi|390340600|ref|XP_003725279.1| PREDICTED: uncharacterized protein LOC100893111 [Strongylocentrotus
purpuratus]
Length = 1497
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 104/155 (67%), Gaps = 12/155 (7%)
Query: 58 SGKRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERRE 117
SGK +D+D + ++R++ RD+D+ERHR D+DRD+D R++E E +RD++R R+ +E
Sbjct: 1112 SGKSRHKDKDRD----KEREKPRDKDRERHR-DKDRDKDSHRDKEHERKRDKDRDRQ-KE 1165
Query: 118 KEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSR-SRRERERESEREREL 176
K+K+RER R+DRE E +E+D ERR S + RR R R+ERE+ES +E++
Sbjct: 1166 KDKDRER--RKDREGESSKEKDRERRKDREKDSSKDKDRREKDRDGRKEREKESSKEKD- 1222
Query: 177 ELERERERERELRERERDLEMRESRRYKEKKEVVE 211
E++R + RE +E++RD E +E R +++ KE E
Sbjct: 1223 RGEKDRSKHRE-KEKDRDREKKE-RSHRDNKESAE 1255
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 99/164 (60%), Gaps = 13/164 (7%)
Query: 43 KREDSEEEEEEEKSRSGKRSR-RDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRER 101
+ +D + ++E EK R R R RD+D + S RD++ +R RDK+R R+ +++D+DR R +
Sbjct: 1116 RHKDKDRDKEREKPRDKDRERHRDKDRDKDSHRDKEHERKRDKDRDRQ-KEKDKDRERRK 1174
Query: 102 ERETERDRERSRERR-----EKEKERERRE-----RRDREKERERERD-GERRSSSRSRR 150
+RE E +E+ RERR + K+++RRE R++REKE +E+D GE+ S +
Sbjct: 1175 DREGESSKEKDRERRKDREKDSSKDKDRREKDRDGRKEREKESSKEKDRGEKDRSKHREK 1234
Query: 151 SSSQSRRSSSRSRRERERESERERELELERERERERELRERERD 194
+ R RS R+ + +ER + ER R+R+ + RERE++
Sbjct: 1235 EKDRDREKKERSHRDNKESAERTDSGKKERHRDRDEKKREREKE 1278
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 115/202 (56%), Gaps = 23/202 (11%)
Query: 14 EEQRQQKQDDDSSSKKKAKREEKSERS--YRKREDSEEEEEEEKSRSGKRSRRDEDEENG 71
+++R++ +D D + R++ S R + ++ D + + ++EK + +R R+D + E+
Sbjct: 1123 DKEREKPRDKDRERHRDKDRDKDSHRDKEHERKRDKDRDRQKEKDKDRER-RKDREGESS 1181
Query: 72 SRRDR----DRDRDRDKERHRRDRDRDRDRGRERERETERDR---ERSRER-REKEKERE 123
+DR DR++D K++ RR++DRD + RE+E E+DR +RS+ R +EK+++RE
Sbjct: 1182 KEKDRERRKDREKDSSKDKDRREKDRDGRKEREKESSKEKDRGEKDRSKHREKEKDRDRE 1241
Query: 124 RRERRDRE------------KERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESE 171
++ER R+ KER R+RD ++R + S + S+ R++ RE +
Sbjct: 1242 KKERSHRDNKESAERTDSGKKERHRDRDEKKREREKESGSRDGDKSSTKDGDRDKRREEK 1301
Query: 172 RERELELERERERERELRERER 193
R R+ + ER +E+E +RER
Sbjct: 1302 RHRDKDRERRKEKESNDSDRER 1323
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 115/204 (56%), Gaps = 18/204 (8%)
Query: 10 EKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEE 69
+K ++ R++++D + S K+ RE + +R +++ S++++ EK R G++ R E +
Sbjct: 1163 QKEKDKDRERRKDREGESSKEKDRERRKDR---EKDSSKDKDRREKDRDGRKEREKESSK 1219
Query: 70 NGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRERRD 129
R ++DR + R+KE+ DR RE++ + RD + S ER + K+ R+R +
Sbjct: 1220 EKDRGEKDRSKHREKEK---------DRDREKKERSHRDNKESAERTDSGKKERHRDRDE 1270
Query: 130 REKERERE---RDGERRSSS---RSRRSSSQSRRSSSRSRRERERESERERELELERERE 183
+++ERE+E RDG++ S+ R +R + R R RR+ + ++ +RE R+++
Sbjct: 1271 KKREREKESGSRDGDKSSTKDGDRDKRREEKRHRDKDRERRKEKESNDSDRERRKHRDKD 1330
Query: 184 RERELRERERDLEMRESRRYKEKK 207
+ R+RE+ E + + +KE+K
Sbjct: 1331 GSADRRKREKSGERKHRKEHKEEK 1354
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 91/169 (53%), Gaps = 15/169 (8%)
Query: 10 EKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSR-RDEDE 68
E + E+ R +K K+K + EK ERS+R + +E E++ SGK+ R RD DE
Sbjct: 1216 ESSKEKDRGEKDRSKHREKEKDRDREKKERSHR-----DNKESAERTDSGKKERHRDRDE 1270
Query: 69 ENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRERR 128
+ R RD DK +D DRD+ RE +R ++DRER +E+ + +RERR+ R
Sbjct: 1271 KKREREKESGSRDGDKSS---TKDGDRDKRREEKRHRDKDRERRKEKESNDSDRERRKHR 1327
Query: 129 DREKE---RERERDGERRSSSRSRRSSSQSR---RSSSRSRRERERESE 171
D++ R+RE+ GER+ + +S+ ++ R E++RE E
Sbjct: 1328 DKDGSADRRKREKSGERKHRKEHKEEKGRSKSEHKNGQDERHEKKREDE 1376
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 9/131 (6%)
Query: 4 DEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKS-----ERSYRKREDSEEEEEEEKSRS 58
D E E+T ++++ +D D +KK +RE++S ++S K D ++ EE++ R
Sbjct: 1249 DNKESAERTDSGKKERHRDRD---EKKREREKESGSRDGDKSSTKDGDRDKRREEKRHRD 1305
Query: 59 GKRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREK 118
R RR E E N S R+R + RD+D RR R++ +R +E + E+ R +S E +
Sbjct: 1306 KDRERRKEKESNDSDRERRKHRDKDGSADRRKREKSGERKHRKEHKEEKGRSKS-EHKNG 1364
Query: 119 EKERERRERRD 129
+ ER ++R D
Sbjct: 1365 QDERHEKKRED 1375
>gi|440797518|gb|ELR18604.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 696
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 135/295 (45%), Gaps = 60/295 (20%)
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 437
++YVG++H+++T ++ +FE FG V+ L + ETG+ KG+GFV++ + + A+ A
Sbjct: 411 NRIYVGSIHWDLTSDDIKTVFEAFGTVKSCVLMPNPETGKHKGYGFVEYEESKSAEEAIQ 470
Query: 438 ALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTG 497
+NG ++ GR +KV A SA G GL + + ++ G
Sbjct: 471 QMNG-WDLGGRPIKVGR----------AISSAPILPTPGAGLLNPSGLPSPMLGGFPMPG 519
Query: 498 IATSIAGSLGVAPA-VNGSAVNQQAISLPVVGQP-------------------------- 530
++G G+ P + G + Q ++ GQP
Sbjct: 520 ----MSGMPGLLPGMMPGMPLGQPGLT---PGQPLSSASAIAQAIANKKVEESLSHEENL 572
Query: 531 AVPVPAVTAPVIPNMAAEFI--GSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKY 588
+ P ++ +A I G S C++LK+M P D D E++G++ +E +KY
Sbjct: 573 TLSTPNQRYALMQKLARGTITGGKSSRCVVLKDMAGPE-----DVDDELEGEITDEATKY 627
Query: 589 GRVKH--IYVDKRS--AGFV----YLRFESTEAAASAQRAMHMRWFARRLISAIF 635
G V+ IY +++S G V ++ F+S + A A +++ RWF R I A F
Sbjct: 628 GIVERVVIYQERQSEKPGDVIIKIFILFQSADQAQKALTSLNGRWFGGRQIKAAF 682
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 379 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 438
++YVG+L+F ++E ++ F PFGPV+ V L D T + KGF FV++A + A AA
Sbjct: 252 RIYVGSLNFELSEEDIKTAFSPFGPVKSVSLTKDPLTQRSKGFAFVEYAYPDAATAALKH 311
Query: 439 LNGKLEIVGRTLKVS 453
+NG + + GR LKV
Sbjct: 312 MNGFM-LAGRQLKVG 325
>gi|328865553|gb|EGG13939.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 949
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 108/262 (41%), Gaps = 72/262 (27%)
Query: 377 DRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQ 436
D ++YVG++ +N TE Q++ +F G V L ++ETG+ G+GF+ + + A+ A
Sbjct: 741 DNRVYVGSVPWNATEDQIKTIFSSIGNVVSCSLKPNLETGRHMGYGFIDYDNPKSAEDAI 800
Query: 437 SALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGG----GLALNAQSRALLMQK 492
S NG +I GR LKV + + +++DG ++LN + + LL QK
Sbjct: 801 STFNG-YDINGRQLKV---------RKPVRNAPKVNNNDGNLLEDNISLNNEQKILLTQK 850
Query: 493 LDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGS 552
L +A S PA N
Sbjct: 851 L--------LAAS---EPATN--------------------------------------- 860
Query: 553 PSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGF-VYLRFEST 611
C++++N+ PA E D F+ EI+ ECS +G V+ + + Y+ F
Sbjct: 861 --RCMVMRNLGSPA-ELDEYFEEEIK----NECSSFGAVEKVVITNEGTSVKAYVLFRDA 913
Query: 612 EAAASAQRAMHMRWFARRLISA 633
+ A + R+F+ L+ A
Sbjct: 914 PSCAMCLSKQNGRYFSGYLVKA 935
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 376 IDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAA 435
I ++Y+GN+HFN+TE + F PFGP++ + L D TG+ +GF F+++ E A A
Sbjct: 601 IQSRIYIGNIHFNLTEADIVAAFSPFGPIKSLSLSKDPATGRSRGFCFIEYTYPEAAINA 660
Query: 436 QSALNGKLEIVGRTLKV 452
+N K I GR +KV
Sbjct: 661 IQNMNQKT-ISGRQIKV 676
>gi|330801236|ref|XP_003288635.1| hypothetical protein DICPUDRAFT_152902 [Dictyostelium purpureum]
gi|325081308|gb|EGC34828.1| hypothetical protein DICPUDRAFT_152902 [Dictyostelium purpureum]
Length = 1853
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 85/152 (55%), Gaps = 15/152 (9%)
Query: 70 NGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRERRD 129
NGS RD RD+D +E HR R +R+ +R +E DR++ E +R++ R D
Sbjct: 1370 NGSSRDHHRDKDHHRESHREHRSSEREHRSDRSKEHRSDRDK-----EHRSDRDKEHRSD 1424
Query: 130 REKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELR 189
R+KE ER+ ++ S R++ S R RS R++E S+R++E ERE+++ RE R
Sbjct: 1425 RDKEHRSEREKDQHRSDRNKEHRSGERDKEHRSDRDKEHRSDRDKEHRSEREKDQHREAR 1484
Query: 190 ----ERERDL-----EMRESRRYKEKKEVVEP 212
ERE+D E ++R +KE KEV EP
Sbjct: 1485 TSIGEREKDQNRDHREKDQNRDHKE-KEVKEP 1515
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 84/149 (56%), Gaps = 10/149 (6%)
Query: 24 DSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRD 83
+ SS+ + ++ S+R+ SE E ++S K R D D+E+ S RD++ DRD
Sbjct: 1370 NGSSRDHHRDKDHHRESHREHRSSEREHRSDRS---KEHRSDRDKEHRSDRDKEHRSDRD 1426
Query: 84 KERHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRERRDREKERERERDGERR 143
KE HR +R++D+ R +R +E R ER +E R ++++E R RD+E ERE+D R
Sbjct: 1427 KE-HRSEREKDQHRS-DRNKE-HRSGERDKEHRS-DRDKEHRSDRDKEHRSEREKDQHRE 1482
Query: 144 S-SSRSRRSSSQSR--RSSSRSRRERERE 169
+ +S R Q+R R ++R +E+E
Sbjct: 1483 ARTSIGEREKDQNRDHREKDQNRDHKEKE 1511
>gi|356509477|ref|XP_003523474.1| PREDICTED: splicing factor U2af large subunit B-like [Glycine max]
Length = 600
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 72/149 (48%), Gaps = 20/149 (13%)
Query: 320 YRYIEFYDVMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSA 365
+ ++E V A+AL G + G PV V+ PS+ NL N A
Sbjct: 313 FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAATLGPSQPNPNL---NLGA 369
Query: 366 GGTATGPYGAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGF 423
G G G +D +++VG L + TETQ+R+L E FGP+ L D ETG KG+ F
Sbjct: 370 VGLTPGSAGGLDGPDRVFVGGLPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAF 429
Query: 424 VQFAQLEHAKAAQSALNGKLEIVGRTLKV 452
+ L A +ALNG +++ +TL V
Sbjct: 430 CVYQDLAVTDIACAALNG-IKMGDKTLTV 457
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 41 YRKREDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRDKERH-RRDRDRDRDRGR 99
Y +R + EEEE + + + S D K RH RD DRD R R
Sbjct: 4 YEERYEGNGEEEE------LHNSHHQPHPDSSPLPTHDDLTDSKSRHGSRDYDRDSSRSR 57
Query: 100 ERERETERDRERSRERREKEKERERRERRDREKE 133
++ERE RDRER +REK ++RER + RDR+ E
Sbjct: 58 DKEREKGRDRER---KREKGRDREREKSRDRDSE 88
>gi|122245119|sp|Q2QKB3.1|U2A2A_WHEAT RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=U2 auxiliary factor 65 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit A; Short=U2 snRNP auxiliary factor large
subunit A
gi|68036924|gb|AAY84881.1| U2AF large subunit [Triticum aestivum]
Length = 591
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 85/190 (44%), Gaps = 24/190 (12%)
Query: 281 LINSCCVIKFF--LVAEVGMVFFLLGDETYTVLDPATVLVSYRYIEFYDVMSVPMAIALS 338
+ N V FF ++A +G F LG V + ++E V A+AL
Sbjct: 282 IANEQTVAVFFNQVMAAIGGNTFALGHAVVNVY--INHDKKFAFVEMRSVEEASNAMALD 339
Query: 339 GQLLLGQPVMVK--------------PSEAEKNLVQSNTSAGGTATGPYGAIDR--KLYV 382
G + G PV V+ PS+ NL N +A G G G ++ +++V
Sbjct: 340 GIMFEGAPVKVRRPTDYNPSQAAALGPSQPNPNL---NLAAVGLTPGAGGGLEGPDRIFV 396
Query: 383 GNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGK 442
G L + TE Q+R+L E FGP+ + D ETG KG+ F + A +ALNG
Sbjct: 397 GGLPYYFTEAQVRELLETFGPLRGFDIVKDKETGNSKGYAFCLYKDGTVTDIACAALNG- 455
Query: 443 LEIVGRTLKV 452
+++ RTL V
Sbjct: 456 IQLGDRTLTV 465
>gi|357455537|ref|XP_003598049.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487097|gb|AES68300.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 627
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 20/149 (13%)
Query: 320 YRYIEFYDVMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSA 365
+ ++E V A+AL G + G PV V+ PS+ NL N
Sbjct: 337 FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAAALGPSQPNPNL---NLGL 393
Query: 366 GGTATGPYGAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGF 423
G + G G +D +++VG + + TETQ+R+L E FGP+ L D ETG KG+ F
Sbjct: 394 VGLSPGSAGGLDGPDRIFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAF 453
Query: 424 VQFAQLEHAKAAQSALNGKLEIVGRTLKV 452
+ L A +ALNG +++ +TL V
Sbjct: 454 CVYQDLAVTDIACAALNG-IKMGDKTLTV 481
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 79/150 (52%), Gaps = 25/150 (16%)
Query: 5 EYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRR 64
EYE+ + EE++ Q+QD+D + + EE+ + K+ G R
Sbjct: 3 EYEFED---EERKFQQQDEDHTHNDSSPPPPPPPPPV-----DEEDLTDSKTNLGSR--- 51
Query: 65 DEDEENGSRRDRDRDRDRDKERHRRDR-----------DRDRDRGRERERETERDRERSR 113
D D E+ R+++R+ R+KER R ++ RDR ER R +R+ ERSR
Sbjct: 52 DNDRESSRSREKERENGREKERKRDKGRDRDRSRDRDREKSRDRESERSR--DRESERSR 109
Query: 114 ER-REKEKERERRERRDREKERERERDGER 142
+R R++E+ R+R ++ K+RER+RDGE+
Sbjct: 110 DRVRDRERSRDRGRDSEKSKDRERDRDGEK 139
>gi|357455535|ref|XP_003598048.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487096|gb|AES68299.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 629
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 20/149 (13%)
Query: 320 YRYIEFYDVMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSA 365
+ ++E V A+AL G + G PV V+ PS+ NL N
Sbjct: 339 FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAAALGPSQPNPNL---NLGL 395
Query: 366 GGTATGPYGAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGF 423
G + G G +D +++VG + + TETQ+R+L E FGP+ L D ETG KG+ F
Sbjct: 396 VGLSPGSAGGLDGPDRIFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAF 455
Query: 424 VQFAQLEHAKAAQSALNGKLEIVGRTLKV 452
+ L A +ALNG +++ +TL V
Sbjct: 456 CVYQDLAVTDIACAALNG-IKMGDKTLTV 483
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 79/150 (52%), Gaps = 25/150 (16%)
Query: 5 EYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRR 64
EYE+ + EE++ Q+QD+D + + EE+ + K+ G R
Sbjct: 3 EYEFED---EERKFQQQDEDHTHNDSSPPPPPPPPPV-----DEEDLTDSKTNLGSR--- 51
Query: 65 DEDEENGSRRDRDRDRDRDKERHRRDR-----------DRDRDRGRERERETERDRERSR 113
D D E+ R+++R+ R+KER R ++ RDR ER R +R+ ERSR
Sbjct: 52 DNDRESSRSREKERENGREKERKRDKGRDRDRSRDRDREKSRDRESERSR--DRESERSR 109
Query: 114 ER-REKEKERERRERRDREKERERERDGER 142
+R R++E+ R+R ++ K+RER+RDGE+
Sbjct: 110 DRVRDRERSRDRGRDSEKSKDRERDRDGEK 139
>gi|357455533|ref|XP_003598047.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487095|gb|AES68298.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 626
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 20/149 (13%)
Query: 320 YRYIEFYDVMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSA 365
+ ++E V A+AL G + G PV V+ PS+ NL N
Sbjct: 339 FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAAALGPSQPNPNL---NLGL 395
Query: 366 GGTATGPYGAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGF 423
G + G G +D +++VG + + TETQ+R+L E FGP+ L D ETG KG+ F
Sbjct: 396 VGLSPGSAGGLDGPDRIFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAF 455
Query: 424 VQFAQLEHAKAAQSALNGKLEIVGRTLKV 452
+ L A +ALNG +++ +TL V
Sbjct: 456 CVYQDLAVTDIACAALNG-IKMGDKTLTV 483
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 79/150 (52%), Gaps = 25/150 (16%)
Query: 5 EYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRR 64
EYE+ + EE++ Q+QD+D + + EE+ + K+ G R
Sbjct: 3 EYEFED---EERKFQQQDEDHTHNDSSPPPPPPPPPV-----DEEDLTDSKTNLGSR--- 51
Query: 65 DEDEENGSRRDRDRDRDRDKERHRRDR-----------DRDRDRGRERERETERDRERSR 113
D D E+ R+++R+ R+KER R ++ RDR ER R +R+ ERSR
Sbjct: 52 DNDRESSRSREKERENGREKERKRDKGRDRDRSRDRDREKSRDRESERSR--DRESERSR 109
Query: 114 ER-REKEKERERRERRDREKERERERDGER 142
+R R++E+ R+R ++ K+RER+RDGE+
Sbjct: 110 DRVRDRERSRDRGRDSEKSKDRERDRDGEK 139
>gi|357438349|ref|XP_003589450.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355478498|gb|AES59701.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 611
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 20/135 (14%)
Query: 334 AIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSAGGTATGPYGAIDR- 378
A+AL G + G PV V+ PS+ NL N G + G G +D
Sbjct: 338 AMALDGIIFEGAPVKVRRPTDYNPSLAAALGPSQPNPNL---NLGLVGLSPGSAGGLDGP 394
Query: 379 -KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 437
+++VG + + TETQ+R+L E FGP+ L D ETG KG+ F + L A +
Sbjct: 395 DRIFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDLAVTDIACA 454
Query: 438 ALNGKLEIVGRTLKV 452
ALNG +++ +TL V
Sbjct: 455 ALNG-IKMGDKTLTV 468
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 79/150 (52%), Gaps = 25/150 (16%)
Query: 5 EYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRR 64
EYE+ + EE++ Q+QD+D + + EE+ + K+ G R
Sbjct: 3 EYEFED---EERKFQQQDEDHTHNDSSPPPPPPPPPV-----DEEDLTDSKTNLGSR--- 51
Query: 65 DEDEENGSRRDRDRDRDRDKERHRRDR-----------DRDRDRGRERERETERDRERSR 113
D D E+ R+++R+ R+KER R ++ RDR ER R +R+ ERSR
Sbjct: 52 DNDRESSRSREKERENGREKERKRDKGRDRDRSRDRDREKSRDRESERSR--DRESERSR 109
Query: 114 ER-REKEKERERRERRDREKERERERDGER 142
+R R++E+ R+R ++ K+RER+RDGE+
Sbjct: 110 DRVRDRERSRDRGRDSEKSKDRERDRDGEK 139
>gi|297840477|ref|XP_002888120.1| hypothetical protein ARALYDRAFT_475241 [Arabidopsis lyrata subsp.
lyrata]
gi|297333961|gb|EFH64379.1| hypothetical protein ARALYDRAFT_475241 [Arabidopsis lyrata subsp.
lyrata]
Length = 589
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 20/149 (13%)
Query: 320 YRYIEFYDVMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSA 365
+ ++E V A+AL G +L G PV V+ PS+ NL N +A
Sbjct: 304 FAFVEMRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPNPNL---NLAA 360
Query: 366 GGTATGPYGAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGF 423
G ++G G ++ +++VG L + TE Q+R+L E FGP+ L D ETG KG+ F
Sbjct: 361 VGLSSGSTGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAF 420
Query: 424 VQFAQLEHAKAAQSALNGKLEIVGRTLKV 452
+ A +ALNG +++ +TL V
Sbjct: 421 CVYQDPSVTDIACAALNG-IKMGDKTLTV 448
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSR 113
+SR D E S + ++DRD+D E+ DRDR++ R R+RE+ +RDRERS+
Sbjct: 42 KSRESHDLEKDSSKISEKDRDKDPEK---DRDREKSRDRDREKSRDRDRERSK 91
>gi|226497766|ref|NP_001152419.1| LOC100286059 [Zea mays]
gi|195656099|gb|ACG47517.1| splicing factor U2AF 65 kDa subunit [Zea mays]
Length = 596
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 73/150 (48%), Gaps = 20/150 (13%)
Query: 320 YRYIEFYDVMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSA 365
+ ++E V A+AL G + G PV V+ PS+ NL N +A
Sbjct: 311 FAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNL---NLAA 367
Query: 366 GGTATGPYGAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGF 423
G G G ++ +++VG L + TE Q+R+L E FGP+ L D ETG KG+ F
Sbjct: 368 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF 427
Query: 424 VQFAQLEHAKAAQSALNGKLEIVGRTLKVS 453
+ L A +ALNG +++ +TL VS
Sbjct: 428 CVYQDLNVTDIACAALNG-IKMGDKTLTVS 456
>gi|380420333|ref|NP_001154919.2| nipped-B-like protein B [Danio rerio]
gi|408407682|sp|F1QBY1.1|NIPLB_DANRE RecName: Full=Nipped-B-like protein B
Length = 2876
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 119/205 (58%), Gaps = 32/205 (15%)
Query: 9 LEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDE 68
L + +E+R +++D DSS K +R + S+ S + +E+E+E+ G R+++
Sbjct: 646 LSRDCKEERHREKDSDSS---KGRRSDTSKSSRVEHNRDKEQEQEKVGDKGLEKGREKEL 702
Query: 69 ENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRER-REKEKERERRER 127
E G ++R +D+++D+E+ RD++ ++GR +ER +R +E+ + R +E+ K R+++
Sbjct: 703 EKGRDKERVKDQEKDQEK---GRDKEVEKGRYKERVKDRVKEQEKVRDKEQVKGRDKKRS 759
Query: 128 RDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERE 187
+D EK RE+++D E E++RE +++ELE RE+++++E
Sbjct: 760 KDLEKCREKDQDKEL----------------------EKDREKNQDKELEKGREKDQDKE 797
Query: 188 L---RERERDLEMRESRRYKEKKEV 209
L RE++RD EM ++R + KE+
Sbjct: 798 LEKGREKDRDKEMEKAREKDQDKEL 822
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 92/150 (61%), Gaps = 9/150 (6%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSG- 59
+E D + +K +E+ R++ QD + ++ R+++ E++ K +D E E+ EK +
Sbjct: 774 LEKDREKNQDKELEKGREKDQDKELEKGREKDRDKEMEKAREKDQDKELEKGREKDQDKE 833
Query: 60 --KRSRRDEDEENGSRRDRDRDRDRDKERHR-----RDRDRDRDRGRERERETERDRERS 112
K +D D+ RD+ RD+DRDK R + R++DRD+ R ++RE+ ERDR++
Sbjct: 834 LEKGQEKDRDKVREKDRDKVRDKDRDKVREKDRDKVREKDRDKLREKDREKIRERDRDKG 893
Query: 113 RERREKEKERERRERRDREKERERERDGER 142
RE ++++KE+ + +D+EKER ++RD ER
Sbjct: 894 RE-KDRDKEQVKTREKDQEKERLKDRDKER 922
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 125/211 (59%), Gaps = 24/211 (11%)
Query: 9 LEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEE-----EEEKSRSGKRSR 63
LEK +++R + Q+ D K + K EK R ++ +E+E E+ K R KRS+
Sbjct: 702 LEKGRDKERVKDQEKDQE-KGRDKEVEKGRYKERVKDRVKEQEKVRDKEQVKGRDKKRSK 760
Query: 64 -----RDEDEENGSRRDRDRDRDRDKERHR-RDRDRDRDRGRERERETERDRERSRER-- 115
R++D++ +DR++++D++ E+ R +D+D++ ++GRE++R+ E ++ R +++
Sbjct: 761 DLEKCREKDQDKELEKDREKNQDKELEKGREKDQDKELEKGREKDRDKEMEKAREKDQDK 820
Query: 116 -------REKEKERERRERRDREKERERERDGER-RSSSRSRRSSSQSRRSSSRSR-RER 166
++++KE E+ + +DR+K RE++RD R + + R R R + RE+
Sbjct: 821 ELEKGREKDQDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDRDKVREKDRDKLREK 880
Query: 167 ERESERERELELERERERERE-LRERERDLE 196
+RE RER+ + RE++R++E ++ RE+D E
Sbjct: 881 DREKIRERDRDKGREKDRDKEQVKTREKDQE 911
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 120/214 (56%), Gaps = 20/214 (9%)
Query: 11 KTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSR-RDEDEE 69
K +E+ R++ QD + ++ ++++ E+ K +D E E+ EK R + + R++D++
Sbjct: 760 KDLEKCREKDQDKELEKDREKNQDKELEKGREKDQDKELEKGREKDRDKEMEKAREKDQD 819
Query: 70 NGSRRDRDRDRDRDKER-HRRDRDRDRDRGRERERETERDRERSRER-REKEKERERRER 127
+ R++D+D++ E+ +DRD+ R++ R++ R+ +RD+ R ++R + +EK+R++
Sbjct: 820 KELEKGREKDQDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDRDKVREKDRDKLRE 879
Query: 128 RDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERE 187
+DREK RER+RD R + R RE+++E ER + +R++ERE+
Sbjct: 880 KDREKIRERDRDKGRE----------KDRDKEQVKTREKDQEKERLK----DRDKEREKV 925
Query: 188 LRERERDLEMRESRRYKEKKEVVEPEADPERDQR 221
+ +E +R KE+ E + PE+ R
Sbjct: 926 RDKGRDRDRDQEKKR---NKELTEDKQAPEQRSR 956
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 129/222 (58%), Gaps = 19/222 (8%)
Query: 10 EKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSR-----SGKRSRR 64
EK +E+ R +++ D ++ R+++ E+ K + +E+EK R G+ +R
Sbjct: 699 EKELEKGRDKERVKDQEKDQEKGRDKEVEKGRYKERVKDRVKEQEKVRDKEQVKGRDKKR 758
Query: 65 DEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERER 124
+D E +D+D++ ++D+E+ ++D++ ++GRE++++ E ++ R ++R +KE E+ R
Sbjct: 759 SKDLEKCREKDQDKELEKDREK---NQDKELEKGREKDQDKELEKGREKDR-DKEMEKAR 814
Query: 125 RERRDREKERERERD-------GERRSSSRSRRSSSQSRRSSSRSR-RERERESEREREL 176
+ +D+E E+ RE+D G+ + + R R R + RE++R+ RE++
Sbjct: 815 EKDQDKELEKGREKDQDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDRDKVREKDR 874
Query: 177 ELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPER 218
+ RE++RE+ +RER+RD + RE R KE+ + E + + ER
Sbjct: 875 DKLREKDREK-IRERDRD-KGREKDRDKEQVKTREKDQEKER 914
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 100/173 (57%), Gaps = 11/173 (6%)
Query: 10 EKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSR-RDEDE 68
+K +E+ R++ QD + ++ ++++ E+ K D E++ +K R R + R++D
Sbjct: 807 DKEMEKAREKDQDKELEKGREKDQDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDR 866
Query: 69 ENGSRRDRDRDRDRDKERHR---------RDRDRDRDRGRERERETERDRERSRERREKE 119
+ +DRD+ R++D+E+ R +DRD+++ + RE+++E ER ++R +E REK
Sbjct: 867 DKVREKDRDKLREKDREKIRERDRDKGREKDRDKEQVKTREKDQEKERLKDRDKE-REKV 925
Query: 120 KERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESER 172
+++ R RD+EK+R +E ++++ + R +S + R+ E + + ER
Sbjct: 926 RDKGRDRDRDQEKKRNKELTEDKQAPEQRSRPNSPRVKQEPRNGEESKIKPER 978
>gi|333777884|dbj|BAK23967.1| nipped-B like a [Danio rerio]
Length = 2876
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 119/205 (58%), Gaps = 32/205 (15%)
Query: 9 LEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDE 68
L + +E+R +++D DSS K +R + S+ S + +E+E+E+ G R+++
Sbjct: 646 LSRDCKEERHREKDSDSS---KGRRSDTSKSSRVEHNRDKEQEQEKVGDKGLEKGREKEL 702
Query: 69 ENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRER-REKEKERERRER 127
E G ++R +D+++D+E+ RD++ ++GR +ER +R +E+ + R +E+ K R+++
Sbjct: 703 EKGRDKERVKDQEKDQEK---GRDKEVEKGRYKERVKDRVKEQEKVRDKEQVKGRDKKRS 759
Query: 128 RDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERE 187
+D EK RE+++D E E++RE +++ELE RE+++++E
Sbjct: 760 KDLEKCREKDQDKEL----------------------EKDREKNQDKELEKGREKDQDKE 797
Query: 188 L---RERERDLEMRESRRYKEKKEV 209
L RE++RD EM ++R + KE+
Sbjct: 798 LEKGREKDRDKEMEKAREKDQDKEL 822
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 92/150 (61%), Gaps = 9/150 (6%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSG- 59
+E D + +K +E+ R++ QD + ++ R+++ E++ K +D E E+ EK +
Sbjct: 774 LEKDREKNQDKELEKGREKDQDKELEKGREKDRDKEMEKAREKDQDKELEKGREKDQDKE 833
Query: 60 --KRSRRDEDEENGSRRDRDRDRDRDKERHR-----RDRDRDRDRGRERERETERDRERS 112
K +D D+ RD+ RD+DRDK R + R++DRD+ R ++RE+ ERDR++
Sbjct: 834 LEKGQEKDRDKVREKDRDKVRDKDRDKVREKDRDKVREKDRDKLREKDREKIRERDRDKG 893
Query: 113 RERREKEKERERRERRDREKERERERDGER 142
RE ++++KE+ + +D+EKER ++RD ER
Sbjct: 894 RE-KDRDKEQVKTREKDQEKERLKDRDKER 922
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 125/211 (59%), Gaps = 24/211 (11%)
Query: 9 LEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEE-----EEEKSRSGKRSR 63
LEK +++R + Q+ D K + K EK R ++ +E+E E+ K R KRS+
Sbjct: 702 LEKGRDKERVKDQEKDQE-KGRDKEVEKGRYKERVKDRVKEQEKVRDKEQVKGRDKKRSK 760
Query: 64 -----RDEDEENGSRRDRDRDRDRDKERHR-RDRDRDRDRGRERERETERDRERSRER-- 115
R++D++ +DR++++D++ E+ R +D+D++ ++GRE++R+ E ++ R +++
Sbjct: 761 DLEKCREKDQDKELEKDREKNQDKELEKGREKDQDKELEKGREKDRDKEMEKAREKDQDK 820
Query: 116 -------REKEKERERRERRDREKERERERDGER-RSSSRSRRSSSQSRRSSSRSR-RER 166
++++KE E+ + +DR+K RE++RD R + + R R R + RE+
Sbjct: 821 ELEKGREKDQDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDRDKVREKDRDKLREK 880
Query: 167 ERESERERELELERERERERE-LRERERDLE 196
+RE RER+ + RE++R++E ++ RE+D E
Sbjct: 881 DREKIRERDRDKGREKDRDKEQVKTREKDQE 911
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 114/201 (56%), Gaps = 17/201 (8%)
Query: 11 KTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSR-RDEDEE 69
K +E+ R++ QD + ++ ++++ E+ K +D E E+ EK R + + R++D++
Sbjct: 760 KDLEKCREKDQDKELEKDREKNQDKELEKGREKDQDKELEKGREKDRDKEMEKAREKDQD 819
Query: 70 NGSRRDRDRDRDRDKER-HRRDRDRDRDRGRERERETERDRERSRER-REKEKERERRER 127
+ R++D+D++ E+ +DRD+ R++ R++ R+ +RD+ R ++R + +EK+R++
Sbjct: 820 KELEKGREKDQDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDRDKVREKDRDKLRE 879
Query: 128 RDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERE 187
+DREK RER+RD R + R RE+++E ER + +R++ERE+
Sbjct: 880 KDREKIRERDRDKGRE----------KDRDKEQVKTREKDQEKERLK----DRDKEREKV 925
Query: 188 LRERERDLEMRESRRYKEKKE 208
+ +E +R KE E
Sbjct: 926 RDKGRDRDRDQEKKRNKELTE 946
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 129/222 (58%), Gaps = 19/222 (8%)
Query: 10 EKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSR-----SGKRSRR 64
EK +E+ R +++ D ++ R+++ E+ K + +E+EK R G+ +R
Sbjct: 699 EKELEKGRDKERVKDQEKDQEKGRDKEVEKGRYKERVKDRVKEQEKVRDKEQVKGRDKKR 758
Query: 65 DEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERER 124
+D E +D+D++ ++D+E+ ++D++ ++GRE++++ E ++ R ++R +KE E+ R
Sbjct: 759 SKDLEKCREKDQDKELEKDREK---NQDKELEKGREKDQDKELEKGREKDR-DKEMEKAR 814
Query: 125 RERRDREKERERERD-------GERRSSSRSRRSSSQSRRSSSRSR-RERERESEREREL 176
+ +D+E E+ RE+D G+ + + R R R + RE++R+ RE++
Sbjct: 815 EKDQDKELEKGREKDQDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDRDKVREKDR 874
Query: 177 ELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPER 218
+ RE++RE+ +RER+RD + RE R KE+ + E + + ER
Sbjct: 875 DKLREKDREK-IRERDRD-KGREKDRDKEQVKTREKDQEKER 914
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 100/173 (57%), Gaps = 11/173 (6%)
Query: 10 EKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSR-RDEDE 68
+K +E+ R++ QD + ++ ++++ E+ K D E++ +K R R + R++D
Sbjct: 807 DKEMEKAREKDQDKELEKGREKDQDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDR 866
Query: 69 ENGSRRDRDRDRDRDKERHR---------RDRDRDRDRGRERERETERDRERSRERREKE 119
+ +DRD+ R++D+E+ R +DRD+++ + RE+++E ER ++R +E REK
Sbjct: 867 DKVREKDRDKLREKDREKIRERDRDKGREKDRDKEQVKTREKDQEKERLKDRDKE-REKV 925
Query: 120 KERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESER 172
+++ R RD+EK+R +E ++++ + R +S + R+ E + + ER
Sbjct: 926 RDKGRDRDRDQEKKRNKELTEDKQAPEQRSRPNSPRVKQEPRNGEESKIKPER 978
>gi|30696485|ref|NP_176287.3| Splicing factor U2af large subunit B [Arabidopsis thaliana]
gi|209572798|sp|Q8L716.2|U2A2B_ARATH RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B
gi|332195625|gb|AEE33746.1| Splicing factor U2af large subunit B [Arabidopsis thaliana]
Length = 589
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 20/149 (13%)
Query: 320 YRYIEFYDVMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSA 365
+ ++E V A+AL G +L G PV V+ PS+ NL N A
Sbjct: 304 FAFVEMRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPNPNL---NLGA 360
Query: 366 GGTATGPYGAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGF 423
G ++G G ++ +++VG L + TE Q+R+L E FGP+ L D ETG KG+ F
Sbjct: 361 VGLSSGSTGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAF 420
Query: 424 VQFAQLEHAKAAQSALNGKLEIVGRTLKV 452
+ A +ALNG +++ +TL V
Sbjct: 421 CVYQDPSVTDIACAALNG-IKMGDKTLTV 448
>gi|22655131|gb|AAM98156.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
Length = 589
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 20/149 (13%)
Query: 320 YRYIEFYDVMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSA 365
+ ++E V A+AL G +L G PV V+ PS+ NL N A
Sbjct: 304 FAFVEMRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPNPNL---NLGA 360
Query: 366 GGTATGPYGAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGF 423
G ++G G ++ +++VG L + TE Q+R+L E FGP+ L D ETG KG+ F
Sbjct: 361 VGLSSGSTGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAF 420
Query: 424 VQFAQLEHAKAAQSALNGKLEIVGRTLKV 452
+ A +ALNG +++ +TL V
Sbjct: 421 CVYQDPSVTDIACAALNG-IKMGDKTLTV 448
>gi|255568277|ref|XP_002525113.1| splicing factor u2af large subunit, putative [Ricinus communis]
gi|223535572|gb|EEF37240.1| splicing factor u2af large subunit, putative [Ricinus communis]
Length = 549
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 71/149 (47%), Gaps = 20/149 (13%)
Query: 320 YRYIEFYDVMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSA 365
+ ++E V A+AL G + G PV V+ PS+ NL N A
Sbjct: 305 FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNL---NLGA 361
Query: 366 GGTATGPYGAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGF 423
G G G ++ +++VG L + TE Q+R+L E FGP+ L D ETG KG+ F
Sbjct: 362 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 421
Query: 424 VQFAQLEHAKAAQSALNGKLEIVGRTLKV 452
+ L A +ALNG +++ +TL V
Sbjct: 422 CVYQDLSVTDIACAALNG-IKMGDKTLTV 449
>gi|218186084|gb|EEC68511.1| hypothetical protein OsI_36782 [Oryza sativa Indica Group]
Length = 574
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 20/149 (13%)
Query: 320 YRYIEFYDVMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSA 365
+ ++E V A+AL G + G PV V+ PS+ NL N +A
Sbjct: 287 FAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNL---NLAA 343
Query: 366 GGTATGPYGAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGF 423
G G G ++ +++VG L + TE Q+R+L E FGP+ L D ETG KG+ F
Sbjct: 344 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF 403
Query: 424 VQFAQLEHAKAAQSALNGKLEIVGRTLKV 452
+ L A +ALNG +++ +TL V
Sbjct: 404 CVYQDLNVTDIACAALNG-IKMGDKTLTV 431
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 553 PSECLLLKNMFDP-AMETDPDFDLEIQGDVEEECSKYGRVKHIYVDK--------RSAGF 603
P++ + L + P + D +++ +Q D+ EE +YG + + + + G
Sbjct: 471 PTKVVCLTQVISPDELRDDEEYEDIVQ-DMREEGCRYGNLVKVVIPRPDPSGAPVAGVGR 529
Query: 604 VYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPED 640
V+L F E++ A+ MH R FA + A+F PED
Sbjct: 530 VFLEFADIESSTKAKNGMHGRKFANNQVVAVFY-PED 565
>gi|218191627|gb|EEC74054.1| hypothetical protein OsI_09051 [Oryza sativa Indica Group]
Length = 548
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 72/149 (48%), Gaps = 20/149 (13%)
Query: 320 YRYIEFYDVMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSA 365
+ ++E V A+AL G L G PV V+ PS+ NL N +A
Sbjct: 263 FAFVEMRSVEEASNAMALDGILFEGAPVKVRRPTDYNPSLAAALGPSQPSPNL---NLAA 319
Query: 366 GGTATGPYGAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGF 423
G G G ++ +++VG L + TE Q+R+L E FGP+ L D ETG KG+ F
Sbjct: 320 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF 379
Query: 424 VQFAQLEHAKAAQSALNGKLEIVGRTLKV 452
+ L A +ALNG +++ +TL V
Sbjct: 380 CVYQDLNVTDIACAALNG-IKMGDKTLTV 407
>gi|122232770|sp|Q2QZL4.2|U2A2B_ORYSJ RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B
gi|108864649|gb|ABA95281.2| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|222616418|gb|EEE52550.1| hypothetical protein OsJ_34796 [Oryza sativa Japonica Group]
Length = 548
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 72/149 (48%), Gaps = 20/149 (13%)
Query: 320 YRYIEFYDVMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSA 365
+ ++E V A+AL G L G PV V+ PS+ NL N +A
Sbjct: 263 FAFVEMRSVEEASNAMALDGILFEGAPVKVRRPTDYNPSLAAALGPSQPSPNL---NLAA 319
Query: 366 GGTATGPYGAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGF 423
G G G ++ +++VG L + TE Q+R+L E FGP+ L D ETG KG+ F
Sbjct: 320 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF 379
Query: 424 VQFAQLEHAKAAQSALNGKLEIVGRTLKV 452
+ L A +ALNG +++ +TL V
Sbjct: 380 CVYQDLNVTDIACAALNG-IKMGDKTLTV 407
>gi|338762830|gb|AEI98617.1| hypothetical protein 111O18.4 [Coffea canephora]
Length = 570
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 20/149 (13%)
Query: 320 YRYIEFYDVMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSA 365
+ ++E V A+AL G + G PV V+ PS+ NL N +A
Sbjct: 286 FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNL---NLAA 342
Query: 366 GGTATGPYGAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGF 423
G G G ++ +++VG L + TE Q+R+L E FGP+ L D ETG KG+ F
Sbjct: 343 VGLTPGSAGGLEGPDRIFVGGLPYYFTEGQIRELLESFGPLRGFDLVKDRETGNSKGYAF 402
Query: 424 VQFAQLEHAKAAQSALNGKLEIVGRTLKV 452
+ L A +ALNG +++ +TL V
Sbjct: 403 CVYQDLSVTDIACAALNG-IKMGDKTLTV 430
>gi|413920214|gb|AFW60146.1| hypothetical protein ZEAMMB73_955987 [Zea mays]
Length = 536
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 20/149 (13%)
Query: 320 YRYIEFYDVMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSA 365
+ ++E V A+AL G + G PV V+ PS+ NL N +A
Sbjct: 254 FAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPSPNL---NLAA 310
Query: 366 GGTATGPYGAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGF 423
G G G ++ +++VG L + TE Q+R+L E FGP+ L D ETG KG+ F
Sbjct: 311 VGLTAGSNGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF 370
Query: 424 VQFAQLEHAKAAQSALNGKLEIVGRTLKV 452
+ L A +ALNG +++ +TL V
Sbjct: 371 CVYQDLTVTDIACAALNG-IKMGDKTLTV 398
>gi|212723502|ref|NP_001131562.1| uncharacterized protein LOC100192903 [Zea mays]
gi|194691860|gb|ACF80014.1| unknown [Zea mays]
gi|195646366|gb|ACG42651.1| splicing factor U2AF 65 kDa subunit [Zea mays]
gi|413920213|gb|AFW60145.1| Splicing factor U2AF subunit [Zea mays]
Length = 539
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 20/149 (13%)
Query: 320 YRYIEFYDVMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSA 365
+ ++E V A+AL G + G PV V+ PS+ NL N +A
Sbjct: 254 FAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPSPNL---NLAA 310
Query: 366 GGTATGPYGAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGF 423
G G G ++ +++VG L + TE Q+R+L E FGP+ L D ETG KG+ F
Sbjct: 311 VGLTAGSNGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF 370
Query: 424 VQFAQLEHAKAAQSALNGKLEIVGRTLKV 452
+ L A +ALNG +++ +TL V
Sbjct: 371 CVYQDLTVTDIACAALNG-IKMGDKTLTV 398
>gi|413920212|gb|AFW60144.1| hypothetical protein ZEAMMB73_955987 [Zea mays]
Length = 502
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 20/149 (13%)
Query: 320 YRYIEFYDVMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSA 365
+ ++E V A+AL G + G PV V+ PS+ NL N +A
Sbjct: 254 FAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPSPNL---NLAA 310
Query: 366 GGTATGPYGAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGF 423
G G G ++ +++VG L + TE Q+R+L E FGP+ L D ETG KG+ F
Sbjct: 311 VGLTAGSNGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF 370
Query: 424 VQFAQLEHAKAAQSALNGKLEIVGRTLKV 452
+ L A +ALNG +++ +TL V
Sbjct: 371 CVYQDLTVTDIACAALNG-IKMGDKTLTV 398
>gi|242069419|ref|XP_002449986.1| hypothetical protein SORBIDRAFT_05g026740 [Sorghum bicolor]
gi|241935829|gb|EES08974.1| hypothetical protein SORBIDRAFT_05g026740 [Sorghum bicolor]
Length = 545
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 20/149 (13%)
Query: 320 YRYIEFYDVMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSA 365
+ ++E V A+AL G + G PV V+ PS+ NL N +A
Sbjct: 260 FAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPSPNL---NLAA 316
Query: 366 GGTATGPYGAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGF 423
G G G ++ +++VG L + TE Q+R+L E FGP+ L D ETG KG+ F
Sbjct: 317 VGLTAGSTGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF 376
Query: 424 VQFAQLEHAKAAQSALNGKLEIVGRTLKV 452
+ L A +ALNG +++ +TL V
Sbjct: 377 CVYQDLTVTDIACAALNG-IKMGDKTLTV 404
>gi|47227297|emb|CAF96846.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2196
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 77/115 (66%), Gaps = 12/115 (10%)
Query: 74 RDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRER-REKEKERERRERRDREK 132
+++DRD+DR KE+ DRD+DR +E++R+ +R++E+ R++ R KEK+R+R + +DR++
Sbjct: 1880 KEKDRDQDRSKEK-----DRDQDRNKEKDRDQDRNKEKDRDQDRNKEKDRDRSKEKDRDQ 1934
Query: 133 ERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERE 187
+R +E+D +R RS + R S R R +E ER+RE E ER R+++ E
Sbjct: 1935 DRNKEKDRDR------DRSKEKDRERSRERERSRGKEGERQRETEGERHRDQDGE 1983
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 70/113 (61%), Gaps = 21/113 (18%)
Query: 43 KREDSEEEEEEEKSRSGKRSR-RDEDEENGSRRDRDRDRDRDKERHR---RDRDRDRDRG 98
K +D +++ +EK R R++ +D D++ +DRD+DR+++K+R R +DRD+DR+
Sbjct: 1880 KEKDRDQDRSKEKDRDQDRNKEKDRDQDRNKEKDRDQDRNKEKDRDRSKEKDRDQDRN-- 1937
Query: 99 RERERETERDRERSRERREKE---------KERERRERRDREKERERERDGER 142
+E +RDR+RS+E+ + KE ER +R+ E ER R++DGE+
Sbjct: 1938 ----KEKDRDRDRSKEKDRERSRERERSRGKEGER--QRETEGERHRDQDGEK 1984
>gi|193848546|gb|ACF22733.1| U2AF large subunit [Brachypodium distachyon]
Length = 569
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 71/149 (47%), Gaps = 20/149 (13%)
Query: 320 YRYIEFYDVMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSA 365
+ ++E V A+AL G L G PV V+ PS+ NL N +A
Sbjct: 284 FAFVEMRSVEEASNAMALDGILFEGAPVKVRRPTDYNPSLASALGPSQPSSNL---NLAA 340
Query: 366 GGTATGPYGAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGF 423
G G G ++ +++VG L + TE Q+R+L E FG + L D ETG KG+ F
Sbjct: 341 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGSLRGFDLVKDRETGNSKGYAF 400
Query: 424 VQFAQLEHAKAAQSALNGKLEIVGRTLKV 452
+ L A +ALNG +++ +TL V
Sbjct: 401 CVYQDLNVTDIACAALNG-IKMGDKTLTV 428
>gi|440796324|gb|ELR17433.1| Sec7 and ankyrin domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1521
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 102/186 (54%), Gaps = 14/186 (7%)
Query: 21 QDDDSSSKKKAKRE---EKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRD 77
+D D SK RE ++ ++ + E +++ E++K R R R + + G R+R
Sbjct: 260 KDGDKDSKDSKDRERTRDEKDKDKDRSERGDKDREKDKDRHKDRGERGDKSDGGKDRERA 319
Query: 78 RDRDRDKERHRRDRDRDRDRGRERERETE------RDRERSRERREKEKERERRERRDRE 131
R+ D+D+ER +D D+DR+R ++R++E E +DRER+RE +KEKE++R R+D++
Sbjct: 320 RESDKDRERSAKDGDKDRERDKDRDKEKEKDGKDSKDRERTRE-GDKEKEKDRERRKDKD 378
Query: 132 KERERERDGERRSSSRSRRSSSQSRRSSSRSRRE----RERESERERELELERERERERE 187
R GE+ R R S R R +R+ R+R+ E+ REL R R + +
Sbjct: 379 GAGHRRGGGEKSKRDRDRDRDRDSSREGGREKRDKGGRRDRDKEKVRELLDARTRGLDID 438
Query: 188 LRERER 193
LR+ R
Sbjct: 439 LRKLSR 444
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 88/144 (61%), Gaps = 20/144 (13%)
Query: 78 RDRDRDKERHRRDRDRD-RDRGRERERETERD------RERSRERREKEKERERRERRDR 130
RD D +K+R R D+DR+ +D G R ++ ++D RER+R+ ++K+K+R R +DR
Sbjct: 234 RDGDSNKDRERGDKDRESKDGGGGRTKDGDKDSKDSKDRERTRDEKDKDKDRSERGDKDR 293
Query: 131 EKERERERD-GERRSSS-------RSRRSSSQSRRSSSRSRRERERESERERELELE--- 179
EK+++R +D GER S R+R S RS+ ++RER+ +R++E E +
Sbjct: 294 EKDKDRHKDRGERGDKSDGGKDRERARESDKDRERSAKDGDKDRERDKDRDKEKEKDGKD 353
Query: 180 -REREREREL-RERERDLEMRESR 201
++RER RE +E+E+D E R+ +
Sbjct: 354 SKDRERTREGDKEKEKDRERRKDK 377
>gi|156070781|gb|ABU45194.1| unknown [Petunia integrifolia subsp. inflata]
Length = 557
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 20/149 (13%)
Query: 320 YRYIEFYDVMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSA 365
+ ++E V A+AL G + G PV V+ PS+ NL N +A
Sbjct: 275 FAFVEMRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQPSPNL---NLAA 331
Query: 366 GGTATGPYGAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGF 423
G G G ++ +++VG L + TE+Q+R+L E FG + L D ETG KG+ F
Sbjct: 332 VGLTPGSSGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAF 391
Query: 424 VQFAQLEHAKAAQSALNGKLEIVGRTLKV 452
+ + A +ALNG +++ +TL V
Sbjct: 392 CVYQDVSVTDIACAALNG-IKMGDKTLTV 419
>gi|359474788|ref|XP_002280049.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Vitis
vinifera]
Length = 1147
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Query: 23 DDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDR 82
+DS KK + +++ +R+RE +E++E +SR +R + +D+ RD+ RD+ R
Sbjct: 7 EDSDLKKSHRDRDRNGERHRERERDKEKKEHRESRRSEREKSSDDKHREKERDKHRDK-R 65
Query: 83 DKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRERRDRE 131
DKER R RD +RDR RER ++ E++R+R E R+ E+E+ER RD+E
Sbjct: 66 DKERTRSSRDDERDRARERTKDREKERDRDHEGRDAEREKER--ERDKE 112
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 37/130 (28%)
Query: 60 KRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDR-----DRGRERERET---ERDRER 111
K+S RD D NG R R+R+RD++K+ HR R +R D+ RE+ER+ +RD+ER
Sbjct: 12 KKSHRDRDR-NGERH-RERERDKEKKEHRESRRSEREKSSDDKHREKERDKHRDKRDKER 69
Query: 112 SRERREKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESE 171
+R R+ E++R R +DREKER+R+ +G R++E
Sbjct: 70 TRSSRDDERDRARERTKDREKERDRDHEG---------------------------RDAE 102
Query: 172 RERELELERE 181
RE+E E ++E
Sbjct: 103 REKERERDKE 112
>gi|390368097|ref|XP_781203.3| PREDICTED: uncharacterized protein LOC575726 [Strongylocentrotus
purpuratus]
Length = 500
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 52/91 (57%), Gaps = 7/91 (7%)
Query: 352 SEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPL 411
+E E+ SN SA A + L++ ++++ TE++LR+ FE +GP++++ +
Sbjct: 83 NEVEEWDAHSNASATSNAF-------KTLFIARVNYDTTESKLRREFESYGPIKMISIAH 135
Query: 412 DIETGQCKGFGFVQFAQLEHAKAAQSALNGK 442
DI TG+ KG+ F+++A +A +GK
Sbjct: 136 DINTGKPKGYAFIEYAHERDMHSAYKYADGK 166
>gi|255576469|ref|XP_002529126.1| prp4, putative [Ricinus communis]
gi|223531405|gb|EEF33239.1| prp4, putative [Ricinus communis]
Length = 1033
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 101/169 (59%), Gaps = 19/169 (11%)
Query: 42 RKRE-DSEEEEEEEKSRSGKR-SRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGR 99
R+RE + E+ E+ + RS +R RRD+D E RD+ RD+DR++ RDRD R++GR
Sbjct: 304 REREMNWEQRREQGRERSRERDQRRDKDRERSRERDQRRDKDRERS---RDRDLRREKGR 360
Query: 100 ERERETERDRERSRERREKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSS 159
E R++ DR R RE +E+E+ R+R RD ++++++ER + R R +R Q RS
Sbjct: 361 EGSRDSSVDRYRRRE-KEQERSRDREVDRDLKRQKQQERSWD-REVDRDQRKERQWERSL 418
Query: 160 SR---SRRERERESERERELELERERERERE---------LRERERDLE 196
R + R RERE R RE EL+++R++E++ ER+RD E
Sbjct: 419 DREMINDRRREREQGRSREEELDKKRQKEKDRSKDKSMSRANERDRDWE 467
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 92/161 (57%), Gaps = 11/161 (6%)
Query: 32 KREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRDKERH-RRD 90
+RE+ ERS + D +++ E+SR + RRD+D E R RDRD R+K R RD
Sbjct: 313 RREQGRERS--RERDQRRDKDRERSRE-RDQRRDKDRE----RSRDRDLRREKGREGSRD 365
Query: 91 RDRDRDRGRERERETERDRERSRE-RREKEKER--ERRERRDREKERERERDGERRSSSR 147
DR R RE+E+E RDRE R+ +R+K++ER +R RD+ KER+ ER +R +
Sbjct: 366 SSVDRYRRREKEQERSRDREVDRDLKRQKQQERSWDREVDRDQRKERQWERSLDREMIND 425
Query: 148 SRRSSSQSRRSSSRSRRERERESERERELELEREREREREL 188
RR Q R ++R++E +R ++ + R ER+R+
Sbjct: 426 RRREREQGRSREEELDKKRQKEKDRSKDKSMSRANERDRDW 466
>gi|255089803|ref|XP_002506823.1| predicted protein [Micromonas sp. RCC299]
gi|226522096|gb|ACO68081.1| predicted protein [Micromonas sp. RCC299]
Length = 554
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 18/137 (13%)
Query: 320 YRYIEFYDVMSVPMAIALSGQLLLG--------------QPVMVKPSEAEKNLVQSNTSA 365
+ ++EF V A+AL G ++ G Q ++ P+ +L N +A
Sbjct: 272 FAFVEFRTVEEASNAMALDGVVMAGSQLRVRRPNDYQPQQAALIGPTTPADSL---NLAA 328
Query: 366 GGTATGPYG-AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFV 424
G G G + RKLYVGNL +TE Q+ +L + FG V+ L +D +TG KG+GF
Sbjct: 329 VGLIPGVNGQSSGRKLYVGNLPPYLTELQVLELLQSFGAVQAFNLVVDKDTGTLKGYGFF 388
Query: 425 QFAQLEHAKAAQSALNG 441
++A +AA L G
Sbjct: 389 EYADAAADEAAMEGLTG 405
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 552 SPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYV---------DKRSAG 602
S SEC+ L NM TDP EI D +EEC+ +G + + + D G
Sbjct: 451 SASECVRLTNMVTREELTDPTEAREILEDTQEECAGFGELTRVVMPLPRRTRLEDPAGVG 510
Query: 603 FVYLRFESTEAAASAQRAMHMRWFARRLISAIFM 636
V+L F E AA A R+++ R FA R++SA F+
Sbjct: 511 EVFLLFADAEGAARAVRSLNGRKFADRVVSAGFI 544
>gi|395536556|ref|XP_003770280.1| PREDICTED: TRAF3-interacting protein 1 [Sarcophilus harrisii]
Length = 691
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 104/179 (58%), Gaps = 22/179 (12%)
Query: 9 LEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSR-RDED 67
+ K EE+R + D S S+++ +REE + ++RE + ++E EKS+ R R +D D
Sbjct: 138 IHKEKEEKRNSEIKDRSPSRERKQREEGKDEESKQRE-KDRDKEREKSKENDRERHKDPD 196
Query: 68 EENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRER 127
+ +RDR+++R K+ R++ RD+DRG ++RE ERD+E+ + + + KE+ER +
Sbjct: 197 RDKVKDGERDRNKNRAKQEREREKSRDKDRG-PKDRELERDKEKDK-KNDSGKEKERLKE 254
Query: 128 RDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERER 186
RDRE+E+E+ +D +R RRER ++ E +E E ++ +E+E+
Sbjct: 255 RDREREKEKGKDKDR------------------DKRRERVKDGEHSKEHEKDKIKEQEK 295
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 128/226 (56%), Gaps = 37/226 (16%)
Query: 35 EKSERSYRKREDSEEEEEEEKSRSGKRSRRDE-DEENGSRRDRDRDRDRDKERHRRDRDR 93
E+ R ++++E+ E +++S S +R +R+E +E +R++DRD++R+K + DR+R
Sbjct: 133 EEEPRIHKEKEEKRNSEIKDRSPSRERKQREEGKDEESKQREKDRDKEREKSKEN-DRER 191
Query: 94 DRDRGRERERETERDRERSRERREKEKERERRERRDRE---KERERERDGERRSSSRSRR 150
+D R++ ++ ERDR ++R ++E RER + RD++ K+RE ERD E+
Sbjct: 192 HKDPDRDKVKDGERDRNKNRAKQE----REREKSRDKDRGPKDRELERDKEK-------- 239
Query: 151 SSSQSRRSSSRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVV 210
+++ S +ER +E +RERE E ++++R++ RER +D E + EK ++
Sbjct: 240 ----DKKNDSGKEKERLKERDREREKEKGKDKDRDKR-RERVKD---GEHSKEHEKDKIK 291
Query: 211 EPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDR 256
E E ++ TV ++ + FS++ V+D R+ MDR
Sbjct: 292 EQEKTEKKAAGTV-----------ENLSKKFSEST-VKDPRMEMDR 325
>gi|410897321|ref|XP_003962147.1| PREDICTED: LOW QUALITY PROTEIN: TRAF3-interacting protein 1-like
[Takifugu rubripes]
Length = 649
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 23/134 (17%)
Query: 43 KREDSEEEEEEEKSRSGKRSRRDED---------EENGSRRDRDRDRDRDKERHR-RDRD 92
+R D E+E + RS K RR+++ +E +D+ R R++D+ERH RD+D
Sbjct: 186 RRRDGEKEHHRGRERSDKHQRREQEGHTKDKSHEQERDKEKDKARSREKDRERHHERDKD 245
Query: 93 RDRDRGRERERETERDRERSRER-REKEKERERR------------ERRDREKERERERD 139
++RDR ER+++ ERDRER ER ++KEK+R+R ++R R KER+RER+
Sbjct: 246 KERDRHHERDKDEERDRERHHERDKDKEKDRDRHHDSHAAPERDKDKQRGRGKERQRERN 305
Query: 140 GERRSSSRSRRSSS 153
E ++S SS+
Sbjct: 306 KEPEERNKSGESSN 319
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 82/132 (62%), Gaps = 8/132 (6%)
Query: 63 RRDEDEENGSRRDR-DRDRDRDKERHRRDR--DRDRDRGRERERETERDRERSRERREKE 119
RRD ++E+ R+R D+ + R++E H +D+ +++RD+ +++ R E+DRER E R+K+
Sbjct: 187 RRDGEKEHHRGRERSDKHQRREQEGHTKDKSHEQERDKEKDKARSREKDRERHHE-RDKD 245
Query: 120 KERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELE 179
KER+R RD+++ER+RER ER R R S + ER+++ +R R E +
Sbjct: 246 KERDRHHERDKDEERDRERHHERDKDKEKDR----DRHHDSHAAPERDKDKQRGRGKERQ 301
Query: 180 RERERERELRER 191
RER +E E R +
Sbjct: 302 RERNKEPEERNK 313
>gi|432887647|ref|XP_004074952.1| PREDICTED: LOW QUALITY PROTEIN: nipped-B-like protein-like [Oryzias
latipes]
Length = 2690
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 74/128 (57%), Gaps = 14/128 (10%)
Query: 19 QKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDR 78
QK D S+S K EEK+ S+R S E + R+ SR D+D+ R++++
Sbjct: 603 QKHDQHSNSLHK---EEKNNNSHRS---SRPETPKSSGRADYNSRCDDDKVRHKERNKEK 656
Query: 79 DRDRDKERHR-RDRDRDRDRGRE----RERETERDRERSRER---REKEKERERRERRDR 130
R R++++HR R++ RDRD+ +E RE E ++DR + RE+ REKE ++ RD+
Sbjct: 657 QRVREEDKHRDRNKTRDRDKSKEVEGPREAEIDKDRHKDREQDKDREKESIEDKTRSRDK 716
Query: 131 EKERERER 138
+K R R++
Sbjct: 717 DKGRNRDK 724
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 117/216 (54%), Gaps = 14/216 (6%)
Query: 15 EQRQQKQDDDSSSKKK--AKREEKSER---SYRKRED--SEEEEEEEKSRSGKRSRRDED 67
E R+ KQ+ SK K + R ++R R++ D S +EEK+ + RS R E
Sbjct: 570 ESRRLKQESQRVSKPKHESNRGHSNDRRSDMVRQKHDQHSNSLHKEEKNNNSHRSSRPET 629
Query: 68 EENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRER---REKEKERER 124
++ R D + D DK RH+ +R++++ R RE + RDR ++R+R +E E RE
Sbjct: 630 PKSSGRADYNSRCDDDKVRHK---ERNKEKQRVREEDKHRDRNKTRDRDKSKEVEGPREA 686
Query: 125 RERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERER 184
+DR K+RE+++D E+ S RS + + + R+ ++ E+E++ E E++++R
Sbjct: 687 EIDKDRHKDREQDKDREKESIEDKTRSRDKDKGRNRDKIRDVDKPREKEKDKEREKDKDR 746
Query: 185 ERELRERERDLEMRESRRYKEKKEVVEPEADPERDQ 220
RE R + ++ + R+ KE + P+ +P+ D+
Sbjct: 747 HRE-RTKGKERDRNRKRKTKEDPDKTSPDQNPKPDK 781
>gi|281206591|gb|EFA80777.1| hypothetical protein PPL_06363 [Polysphondylium pallidum PN500]
Length = 710
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 352 SEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPL 411
+E EK+L SA T G I L+V NL + TE L +LF FG ++ +++
Sbjct: 145 NEDEKDLSFMEDSAHPTEGGDQTDIPPALFVANLEWWTTEQNLEQLFSEFGKLKNLKIFE 204
Query: 412 DIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQ 462
+ G+ KG+ FV+ + A+ A+ LN K E+ G+T+ + S+ H Q
Sbjct: 205 NETNGKSKGYAFVELQSHDIARQAKEKLNNK-ELNGKTIIIKSMNQHTYQQ 254
>gi|384249020|gb|EIE22503.1| hypothetical protein COCSUDRAFT_56177 [Coccomyxa subellipsoidea
C-169]
Length = 2243
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 97/188 (51%), Gaps = 26/188 (13%)
Query: 25 SSSKKKAKREEKSERSYRKREDSEEEEEEEK-SRSGKRSRRDEDEENGSRRDRDRD---- 79
S+S + R+E + S RK E E +E +R +S +D+D+ + R+ DR+
Sbjct: 680 STSDRGNSRDEGN--SKRKHEPVRWEPGQEGGARKKSKSDQDKDDRHKDRKSHDREGGHK 737
Query: 80 ----------RDRDKERHR---RDRDRDRDRGRERERETERDR--ERSRERREKEKERER 124
+DRD+E+ + R++DRDRD G++R R+ ER + E +R KEK+RER
Sbjct: 738 EKKRKHKEKDKDRDREKDKEKDREKDRDRDIGKDRSRDKERTKALEADGDRDRKEKQRER 797
Query: 125 RERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERER 184
RR E++RE+D E+ + + R ++ ERE E R +E + R++
Sbjct: 798 DSRR----EKDREKDREKERQREREKEKVRDRERAAEKSHRSEREKESRRSVEALKSRDQ 853
Query: 185 ERELRERE 192
E+ R +E
Sbjct: 854 EQAQRSKE 861
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 28/166 (16%)
Query: 63 RRDEDEENGSRR----DRDRDRDRDKERHRRDRD----------------RDRDRGRERE 102
R + +E G+R+ D+D+D DR K+R DR+ RDR++ +E++
Sbjct: 701 RWEPGQEGGARKKSKSDQDKD-DRHKDRKSHDREGGHKEKKRKHKEKDKDRDREKDKEKD 759
Query: 103 RETERDRERSRER-REKEKERERRERRDRE-KERERERDGERRSSSRSRRSSSQSRRSSS 160
RE +RDR+ ++R R+KE+ + DR+ KE++RERD R R + R
Sbjct: 760 REKDRDRDIGKDRSRDKERTKALEADGDRDRKEKQRERDSRREKDREKDREKERQREREK 819
Query: 161 RSRRERERESERERELELERERERERE-LRERERDLEMRESRRYKE 205
R+RER +E+ E E+E R E L+ R+++ +++R KE
Sbjct: 820 EKVRDRERAAEKSHRSEREKESRRSVEALKSRDQE----QAQRSKE 861
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 45/171 (26%)
Query: 23 DDSSSKKK---AKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSR------ 73
D+ +SK+K + E E RK+ S++++++ + R+ D E G +
Sbjct: 689 DEGNSKRKHEPVRWEPGQEGGARKKSKSDQDKDDRH-----KDRKSHDREGGHKEKKRKH 743
Query: 74 ------RDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRER 127
RDR++D+++D+E+ R DRD +DR R++ER + + R+R+EK++ER+ R
Sbjct: 744 KEKDKDRDREKDKEKDREKDR-DRDIGKDRSRDKERTKALEADGDRDRKEKQRERDSRRE 802
Query: 128 RDREKE----------------RER--------ERDGERRSSSRSRRSSSQ 154
+DREK+ RER ER+ E R S + +S Q
Sbjct: 803 KDREKDREKERQREREKEKVRDRERAAEKSHRSEREKESRRSVEALKSRDQ 853
>gi|225462520|ref|XP_002264268.1| PREDICTED: uncharacterized protein LOC100266959 [Vitis vinifera]
Length = 902
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 102/186 (54%), Gaps = 38/186 (20%)
Query: 25 SSSKKKAKREEKSERSYRK---------REDSEEEEEEEKSRSGKRSRRDED---EENGS 72
S +KK++REEK R + +E +E ++ EK R R RR ED E
Sbjct: 48 SKDRKKSRREEKDHRGKDRERSKAGDGLKEREKETKDSEKDRVTSRERRKEDRDEREKDR 107
Query: 73 RRDRDRDRDRDKERHR---RDRDRDR-------------------DRGRERERETERDRE 110
RD+ R++D D+E++R R+RD+DR DRGR++ER E++R+
Sbjct: 108 NRDKVREKDYDREKYRDKERERDKDRKDRGKEKEREREREVDKESDRGRDKERGKEKNRD 167
Query: 111 RSRERREKEKERERRERRDREKERERERDGER-RSSSRSRRSSSQSRRSSSRSRRERERE 169
R +ER EKER+R + RDREKE+E+ +D E+ R + + R + + R++ERE
Sbjct: 168 RDKER---EKERDRTKDRDREKEKEKSKDREKERENDKDRDRDAIDKEKGKERIRDKERE 224
Query: 170 SERERE 175
++++R+
Sbjct: 225 ADQDRD 230
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 99/178 (55%), Gaps = 20/178 (11%)
Query: 65 DEDEENG-----SRRDRDRDRDRDKERHRRDRDRDRDRG----RERERET---ERDRERS 112
D+ EENG R +DR + R +E+ R +DR+R + +ERE+ET E+DR S
Sbjct: 33 DDLEENGIEKSSKHRSKDRKKSRREEKDHRGKDRERSKAGDGLKEREKETKDSEKDRVTS 92
Query: 113 RERR-----EKEKERERRERRDREKERERERDGER-RSSSRSRRSSSQSRRSSSRSRRER 166
RERR E+EK+R R + R+++ +RE+ RD ER R R R + R +E
Sbjct: 93 RERRKEDRDEREKDRNRDKVREKDYDREKYRDKERERDKDRKDRGKEKEREREREVDKES 152
Query: 167 ERESERERELELEREREREREL-RERERDLEMRESRRYKEKKEVVEPEADPERDQRTV 223
+R ++ER E R+R++ERE R+R +D + RE + K K E E D +RD+ +
Sbjct: 153 DRGRDKERGKEKNRDRDKEREKERDRTKDRD-REKEKEKSKDREKERENDKDRDRDAI 209
>gi|307203942|gb|EFN82849.1| Death-inducer obliterator 1 [Harpegnathos saltator]
Length = 2352
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 86/159 (54%), Gaps = 18/159 (11%)
Query: 47 SEEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRDKER---------------HRRDR 91
S+ + +KS++G RR +D+E G RD +R + +D+ RD+
Sbjct: 1497 SKSRTDAKKSKNGMDERRKKDKERGRERDSNRSKGKDRRERSRSRHRHSRDRDRSKTRDK 1556
Query: 92 DRDRDRGRERERETERDRERSRER-REKEKERERRERRDREKERERERDGERRSSSRSRR 150
+++ GR +E + E+D+ER +++ RE+ K+R+R++ R+R R+ ERD + + R
Sbjct: 1557 SKEQKSGRGKESKREKDKERDKDKVRERNKDRDRKDSRER--GRQNERDRHKMGNDGRMR 1614
Query: 151 SSSQSRRSSSRSRRERERESERERELELERERERERELR 189
+ S SR S +RE ER+ E+++E+ E+ E R
Sbjct: 1615 NRSTSRESKDIDKREDERKMEKKKEVSPPPTAEKPIEDR 1653
>gi|296090475|emb|CBI40671.3| unnamed protein product [Vitis vinifera]
Length = 944
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 102/186 (54%), Gaps = 38/186 (20%)
Query: 25 SSSKKKAKREEKSERSYRK---------REDSEEEEEEEKSRSGKRSRRDED---EENGS 72
S +KK++REEK R + +E +E ++ EK R R RR ED E
Sbjct: 48 SKDRKKSRREEKDHRGKDRERSKAGDGLKEREKETKDSEKDRVTSRERRKEDRDEREKDR 107
Query: 73 RRDRDRDRDRDKERHR---RDRDRDR-------------------DRGRERERETERDRE 110
RD+ R++D D+E++R R+RD+DR DRGR++ER E++R+
Sbjct: 108 NRDKVREKDYDREKYRDKERERDKDRKDRGKEKEREREREVDKESDRGRDKERGKEKNRD 167
Query: 111 RSRERREKEKERERRERRDREKERERERDGER-RSSSRSRRSSSQSRRSSSRSRRERERE 169
R +ER EKER+R + RDREKE+E+ +D E+ R + + R + + R++ERE
Sbjct: 168 RDKER---EKERDRTKDRDREKEKEKSKDREKERENDKDRDRDAIDKEKGKERIRDKERE 224
Query: 170 SERERE 175
++++R+
Sbjct: 225 ADQDRD 230
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 99/178 (55%), Gaps = 20/178 (11%)
Query: 65 DEDEENG-----SRRDRDRDRDRDKERHRRDRDRDRDRG----RERERET---ERDRERS 112
D+ EENG R +DR + R +E+ R +DR+R + +ERE+ET E+DR S
Sbjct: 33 DDLEENGIEKSSKHRSKDRKKSRREEKDHRGKDRERSKAGDGLKEREKETKDSEKDRVTS 92
Query: 113 RERR-----EKEKERERRERRDREKERERERDGER-RSSSRSRRSSSQSRRSSSRSRRER 166
RERR E+EK+R R + R+++ +RE+ RD ER R R R + R +E
Sbjct: 93 RERRKEDRDEREKDRNRDKVREKDYDREKYRDKERERDKDRKDRGKEKEREREREVDKES 152
Query: 167 ERESERERELELEREREREREL-RERERDLEMRESRRYKEKKEVVEPEADPERDQRTV 223
+R ++ER E R+R++ERE R+R +D + RE + K K E E D +RD+ +
Sbjct: 153 DRGRDKERGKEKNRDRDKEREKERDRTKDRD-REKEKEKSKDREKERENDKDRDRDAI 209
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 17/96 (17%)
Query: 59 GKRSRRDEDEENGSRRDRDRDRDRDKERHR-------RDRDRDRDR-------GRERERE 104
GK RD D+E RDR +DRDR+KE+ + R+ D+DRDR G+ER R+
Sbjct: 161 GKEKNRDRDKEREKERDRTKDRDREKEKEKSKDREKERENDKDRDRDAIDKEKGKERIRD 220
Query: 105 TERDRERSRERREKEKERERRERRDREKERERERDG 140
ER+ ++ R+R K+R++ R++R++ +R +DG
Sbjct: 221 KEREADQDRDRY---KDRDKGSRKNRDEGHDRSKDG 253
>gi|348532937|ref|XP_003453962.1| PREDICTED: nipped-B-like protein [Oreochromis niloticus]
Length = 2680
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 60/85 (70%), Gaps = 8/85 (9%)
Query: 60 KRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDR------DRGRERERETERDRERSR 113
K RD D+E + ++++RDRD++KER RDRD++R +R R++E+ E++R+R +
Sbjct: 677 KEKERDRDKERHTEKEKERDRDKEKER-DRDRDKERHIEKEKERDRDKEKHIEKERDRDK 735
Query: 114 ERR-EKEKERERRERRDREKERERE 137
+R EKEKER++ + RDR+++ RE
Sbjct: 736 DRHIEKEKERDKAKDRDRKQKMLRE 760
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 60/191 (31%)
Query: 15 EQRQQKQDDDSSSK------------------KKAKREEKSERSYRKREDSEEEEEE--- 53
E + + D SSK K +EEK+ S+R E+ E +
Sbjct: 578 ESKHRHDDKSDSSKGPSDDRRPDPRQKHDKHSKSRHKEEKNHNSHRMLENRPETPKNTSK 637
Query: 54 -EKSRSG--------------------------------KRSRRDEDEENGSRRDRDRDR 80
E+SR G K RD D+E + ++++RDR
Sbjct: 638 TERSRHGEDKGRDRDRDKDRERHKDRDRARDRDKERNIEKEKERDRDKERHTEKEKERDR 697
Query: 81 DRDKERHRRDRDRDRDRGRERERETERDRERSRER---REKEKERERRERRDREKERERE 137
D++KE RDRDRD++R E+E+E +RD+E+ E+ R+K++ E+ + RD+ K+R+R+
Sbjct: 698 DKEKE---RDRDRDKERHIEKEKERDRDKEKHIEKERDRDKDRHIEKEKERDKAKDRDRK 754
Query: 138 RDGERRSSSRS 148
+ R + SR+
Sbjct: 755 QKMLRENCSRN 765
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 17/161 (10%)
Query: 19 QKQDDDSSSKKKAKREEKSERSYRKR-EDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRD 77
QK D S S+ K ++ S R R E + + E+SR G+ RD D + R +D
Sbjct: 603 QKHDKHSKSRHKEEKNHNSHRMLENRPETPKNTSKTERSRHGEDKGRDRDRDKDRERHKD 662
Query: 78 --------RDRDRDKERHRRDRDRDRDRGRERERETERDRERSRER-REKEKERERRERR 128
++R+ +KE+ +RDRD++R E+E+E +RD+E+ R+R R+KE+ E+ + R
Sbjct: 663 RDRARDRDKERNIEKEK---ERDRDKERHTEKEKERDRDKEKERDRDRDKERHIEKEKER 719
Query: 129 DREK----ERERERDGERRSSSRSRRSSSQSRRSSSRSRRE 165
DR+K E+ER+RD +R R ++ R + RE
Sbjct: 720 DRDKEKHIEKERDRDKDRHIEKEKERDKAKDRDRKQKMLRE 760
Score = 38.5 bits (88), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 101/213 (47%), Gaps = 52/213 (24%)
Query: 46 DSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRD---------KERHRRDRDRDRD 96
D + E ++K S + S+ D+++ S + DR D K RH+ +++ +
Sbjct: 563 DGQPEMYKQKQESRRESKHRHDDKSDSSKGPSDDRRPDPRQKHDKHSKSRHKEEKNHNSH 622
Query: 97 RGRERERETERDR---ERSRE----------------RREKEKERERRERRDREKERERE 137
R E ET ++ ERSR +++++ R+R + R+ EKE+ER+
Sbjct: 623 RMLENRPETPKNTSKTERSRHGEDKGRDRDRDKDRERHKDRDRARDRDKERNIEKEKERD 682
Query: 138 RDGERRSSSRSRRSSSQSRRSSSRSRRERERESER------ERELELERERERERELR-E 190
RD ER + R +R++E ER ER +E E+ER+R++E E
Sbjct: 683 RDKERHTEKEKER--------------DRDKEKERDRDRDKERHIEKEKERDRDKEKHIE 728
Query: 191 RERDLEMRESRRYKEKKEVVEPEADPERDQRTV 223
+ERD R+ R+ EK++ + D +R Q+ +
Sbjct: 729 KERD---RDKDRHIEKEKERDKAKDRDRKQKML 758
>gi|449451513|ref|XP_004143506.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus]
gi|449504870|ref|XP_004162317.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus]
Length = 505
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
L+V L++ TE+++++ FE +GP++ V+L D TG+ KG+ F+++ KAA
Sbjct: 140 LFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQA 199
Query: 440 NGKLEIVGRTLKV 452
+G+ +I GR + V
Sbjct: 200 DGR-KIDGRRVLV 211
>gi|341038664|gb|EGS23656.1| hypothetical protein CTHT_0003520 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 584
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 554 SECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYV------DKRSAGF--VY 605
S L L NM P D D EI+ DV EEC K+G V + + +++SAG +Y
Sbjct: 484 SRVLQLLNMVTPEELMDNDDYEEIREDVLEECKKFGNVLSLKIPRPIGGNRQSAGVGKIY 543
Query: 606 LRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAK 644
++FE E+A A RA+ R F+ R + + E+YE
Sbjct: 544 VKFEQVESATKALRALAGRKFSDRTVVTTYFPEENYEVN 582
>gi|356496753|ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Glycine
max]
Length = 481
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
L+V L + TE+++++ FE +GP++ V+L D +T + +G+ F+++ KAA
Sbjct: 143 LFVAKLSYETTESRIKREFESYGPIKRVRLVADKDTNKPRGYAFIEYLHTRDMKAAYKQA 202
Query: 440 NGKLEIVGRTLKV 452
+G+ +I GR + V
Sbjct: 203 DGR-KIDGRRVLV 214
>gi|301610223|ref|XP_002934650.1| PREDICTED: hypothetical protein LOC100495464 [Xenopus (Silurana)
tropicalis]
Length = 559
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 112/206 (54%), Gaps = 28/206 (13%)
Query: 10 EKTVEEQRQQKQD-------DDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRS 62
E+ + E+R+ KQD DSS +K+ K+ +KS+R YR R +S E+ ++R +S
Sbjct: 317 EQLLSERRRNKQDVVSPDCNSDSSIQKRTKKSQKSQRHYRARANSNSSSEQPRNRHRSKS 376
Query: 63 RRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETE----RDRERSRE-RRE 117
R N +D++R+KE+ R +DR RDRG++R+R E +DR RSRE R+
Sbjct: 377 RSRSRSINNYDCGNSKDKERNKEKRSRSKDRQRDRGQDRDRSREGYRGQDRARSREGERD 436
Query: 118 KEKERERRERRDREKE------RERERDGER-RSSSRSRRSSSQSRRSSSRSR------- 163
+ +E R + RDR +E R+R +G+R RS R+R S + R R R
Sbjct: 437 RSREGNRGQDRDRNREGYRGQDRDRSPEGDRERSRERNRDRSREGNRGQDRDRNQEGYRG 496
Query: 164 --RERERESERERELELERERERERE 187
R+R RE +RER E R R ++R+
Sbjct: 497 QDRDRSREGDRERSKEKNRGRGQDRD 522
>gi|66811328|ref|XP_639372.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60468005|gb|EAL66016.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 952
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
LY+ L + T+ QL +F FG + +++ + G+ KG+ FV+F +E A+ A+S
Sbjct: 165 LYISGLEWWTTDQQLENVFLEFGKIVTLKIFENENNGKSKGYAFVEFEHIEQAQLAKSKT 224
Query: 440 NGKLEIVGRTLKV 452
K EI G+ + +
Sbjct: 225 E-KKEINGKEMTI 236
>gi|41054766|ref|NP_956894.1| TRAF3-interacting protein 1 [Danio rerio]
gi|82187293|sp|Q6PGZ3.1|MIPT3_DANRE RecName: Full=TRAF3-interacting protein 1
gi|34783761|gb|AAH56776.1| TNF receptor-associated factor 3 interacting protein 1 [Danio
rerio]
Length = 629
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 10/67 (14%)
Query: 69 ENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRERR 128
+ G R+R +DRDRDK++ RDR++D+ RE+ERE E+DR R EKERER + R
Sbjct: 201 DKGRERERTKDRDRDKDKS---RDREKDKTREKEREREKDRNR-------EKERERDKDR 250
Query: 129 DREKERE 135
D++KERE
Sbjct: 251 DKKKERE 257
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 67/103 (65%), Gaps = 14/103 (13%)
Query: 52 EEEKSRSGKRSRRDEDE------ENGSRRDRDRDRDRDKERHRRDRDRDR-----DRGRE 100
+++++R G+ RD +E +GSR +D D+ +D+E R D+DR R D+GRE
Sbjct: 146 QDKENREGREHHRDREERKGIKESSGSREQKDPDQPKDQESKRDDKDRRRDAERSDKGRE 205
Query: 101 RERETERDRERSRER-REKEKERERRERRDREKERERERDGER 142
RER +RDR++ + R REK+K RE+ R+REK+R RE++ ER
Sbjct: 206 RERTKDRDRDKDKSRDREKDKTREKE--REREKDRNREKERER 246
>gi|159461692|gb|ABW96885.1| Elipsa [Danio rerio]
Length = 629
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 10/67 (14%)
Query: 69 ENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRERR 128
+ G R+R +DRDRDK++ RDR++D+ RE+ERE E+DR R EKERER + R
Sbjct: 201 DKGRERERTKDRDRDKDKS---RDREKDKTREKEREREKDRNR-------EKERERDKDR 250
Query: 129 DREKERE 135
D++KERE
Sbjct: 251 DKKKERE 257
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 67/103 (65%), Gaps = 14/103 (13%)
Query: 52 EEEKSRSGKRSRRDEDE------ENGSRRDRDRDRDRDKERHRRDRDRDR-----DRGRE 100
+++++R G+ RD +E +GSR +D D+ +D+E R D+DR R D+GRE
Sbjct: 146 QDKENREGREHHRDREERKGIKESSGSREQKDPDQPKDQESKRDDKDRRRDAERSDKGRE 205
Query: 101 RERETERDRERSRER-REKEKERERRERRDREKERERERDGER 142
RER +RDR++ + R REK+K RE+ R+REK+R RE++ ER
Sbjct: 206 RERTKDRDRDKDKSRDREKDKTREKE--REREKDRNREKERER 246
Score = 38.9 bits (89), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 43/62 (69%), Gaps = 3/62 (4%)
Query: 54 EKSRSGKRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSR 113
E+S G+ R +D + + RDR++D+ +E ++R+R++DR RE+ERE ++DR++ +
Sbjct: 198 ERSDKGRERERTKDRDRDKDKSRDREKDKTRE---KEREREKDRNREKERERDKDRDKKK 254
Query: 114 ER 115
ER
Sbjct: 255 ER 256
>gi|225430786|ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Vitis
vinifera]
Length = 514
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 41/65 (63%)
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 437
+ L+V L++ TE+++++ FE +GP++ V+L D ET + +G+ F+++ KAA
Sbjct: 138 KTLFVARLNYETTESRIKREFEAYGPIKRVRLITDKETSKPRGYAFIEYMHTRDMKAAYK 197
Query: 438 ALNGK 442
+G+
Sbjct: 198 QADGR 202
>gi|281202872|gb|EFA77074.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 349
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
+YVG + F M E + + +G +E + + ETG+ +GF F+++ A L
Sbjct: 35 VYVGGMPFEMNEGDIIAVMSQYGEIEDCNMVRNKETGKSQGFCFIKYEDQRSTNLAVDNL 94
Query: 440 NGKLEIVGRTLKVSSVTDH 458
G I+GR L+V V D+
Sbjct: 95 TG-YNIMGRLLRVDHVKDY 112
>gi|50417226|gb|AAH78245.1| Rbmx2 protein [Danio rerio]
Length = 358
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
+++G + +TE + +F +G + + L D +TG+ KGF F+ + A
Sbjct: 38 VFIGGFPYELTEGDIICVFSQYGEIANINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 440 NGKLEIVGRTLKVSSVTDH 458
NG ++I GRT++V V ++
Sbjct: 98 NG-IKIKGRTIRVDHVANY 115
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 4/98 (4%)
Query: 99 RERERETERDRERSRERREKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRS 158
RER+RE ERD ++ RER ++ ++R+ +RD EK+RERERDG R+ +R R+
Sbjct: 253 RERDREGERDGDKERER-DRGRQRDGGRQRDGEKDRERERDGGRQRDGERQRERDGGRQR 311
Query: 159 SSRSRRERERESERERELELERERERERELRERERDLE 196
RERER+ R+R+ + +RE+ER+ R+RD+E
Sbjct: 312 DGERDRERERDGGRQRDGDRDREQERD---GGRQRDVE 346
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 67/100 (67%), Gaps = 13/100 (13%)
Query: 49 EEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRDKERHR---RDRDRDRDRGRERERET 105
E ++ E+ R G+ RD D+E R+RDR R RD R R +DR+R+RD GR+R+ E
Sbjct: 249 ETQQRERDREGE---RDGDKE----RERDRGRQRDGGRQRDGEKDRERERDGGRQRDGER 301
Query: 106 ERDRERSRER---REKEKERERRERRDREKERERERDGER 142
+R+R+ R+R R++E+ER+ +RD +++RE+ERDG R
Sbjct: 302 QRERDGGRQRDGERDRERERDGGRQRDGDRDREQERDGGR 341
>gi|68448493|ref|NP_001020337.1| RNA-binding motif protein, X-linked 2 [Danio rerio]
gi|67678309|gb|AAH96985.1| RNA binding motif protein, X-linked 2 [Danio rerio]
Length = 434
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
+++G + +TE + +F +G + + L D +TG+ KGF F+ + A
Sbjct: 38 VFIGGFPYELTEGDIICVFSQYGEIANINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 440 NGKLEIVGRTLKVSSVTDH 458
NG ++I GRT++V V ++
Sbjct: 98 NG-IKIKGRTIRVDHVANY 115
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 78/131 (59%), Gaps = 22/131 (16%)
Query: 74 RDRDRDRDRDKERHR-----------RDRDRDRDRGRERERETERDRERSRER---REKE 119
R+RDR R RD ER R +DR+R+RD GR+R+ E +R+R+ R+R R++E
Sbjct: 267 RERDRGRQRDGERQRERDGGRQRDGEKDRERERDGGRQRDGERQRERDGGRQRDGERDRE 326
Query: 120 KERERRERRDREKERERERDGER-----RSSSRSRRSSSQSRRSSSRSRRERERESERER 174
+ER+ +RD +++RE+ERDG R R R R Q R R R ERER+ R+R
Sbjct: 327 RERDGGRQRDGDRDREQERDGGRQRDVERDQERERDGGRQ--RDGERDR-ERERDGGRQR 383
Query: 175 ELELERERERE 185
+ +R+RER+
Sbjct: 384 DGVRDRKRERD 394
>gi|336272730|ref|XP_003351121.1| hypothetical protein SMAC_06000 [Sordaria macrospora k-hell]
gi|380093684|emb|CCC08648.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 439
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
+Y G L ++++E + +F FG ++L D ETG+ KGFG++++ A L
Sbjct: 35 VYFGGLPYDLSEGDVITIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 440 NGKLEIVGRTLKV 452
G EI GR ++V
Sbjct: 95 GG-AEIGGRLIRV 106
>gi|356538166|ref|XP_003537575.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 1
[Glycine max]
Length = 482
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 437
+ L+V L + TE+++++ FE +GP++ V+L D + + +G+ F+++ KAA
Sbjct: 141 KTLFVAKLSYETTESRIKREFESYGPIKRVRLVADKDINKPRGYAFIEYLHTRDMKAAYK 200
Query: 438 ALNGKLEIVGRTLKV 452
+G+ +I GR + V
Sbjct: 201 QADGR-KIDGRRVLV 214
>gi|195499487|ref|XP_002096969.1| GE25964 [Drosophila yakuba]
gi|194183070|gb|EDW96681.1| GE25964 [Drosophila yakuba]
Length = 908
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 63/105 (60%), Gaps = 19/105 (18%)
Query: 74 RDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRER-REKEKERERRERRDR-- 130
+DRDRDRD+ KE +DRDRD+ + ++R++ E+DR+R E+ +EK+++R+R + +D+
Sbjct: 182 KDRDRDRDKSKE---KDRDRDKSKEKDRDKSKEKDRDRVTEKSKEKDRDRDRAKSKDKFT 238
Query: 131 ------EKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERE 169
EKE+E +S R R + + R R ER+++
Sbjct: 239 AAQAPFEKEKE-------KSEGRKRSAVEPASHPEKRERHERDKQ 276
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 72/117 (61%), Gaps = 14/117 (11%)
Query: 80 RDRDKERHRRDRDRDRDRGRERERETERDRERSRER-REKEKERERRERRDREKERERER 138
R +DKE+ DRDRDRD+ +E+ +RDR++S+E+ R+K KE++R ++ KE++R+R
Sbjct: 176 RVKDKEK---DRDRDRDKSKEK----DRDRDKSKEKDRDKSKEKDRDRVTEKSKEKDRDR 228
Query: 139 DGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELRERERDL 195
D R+ S+ + +++Q+ + + E + S E E+ RER R+++RD
Sbjct: 229 D---RAKSKDKFTAAQAPFEKEKEKSEGRKRSAVEPASHPEK---RERHERDKQRDW 279
Score = 38.5 bits (88), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 62/101 (61%), Gaps = 16/101 (15%)
Query: 51 EEEEKSRSGKRSR-RDEDEENGSRRDRDRDRDRDKERHR-----RDRDRDRDRGRERERE 104
+++EK R R + +++D + +++DRD+ ++K+R R +++DRDRDR + +++
Sbjct: 178 KDKEKDRDRDRDKSKEKDRDRDKSKEKDRDKSKEKDRDRVTEKSKEKDRDRDRAKSKDKF 237
Query: 105 T------ERDRERSRERR----EKEKERERRERRDREKERE 135
T E+++E+S R+ E E+RER +R+K+R+
Sbjct: 238 TAAQAPFEKEKEKSEGRKRSAVEPASHPEKRERHERDKQRD 278
>gi|218440494|ref|YP_002378823.1| hypothetical protein PCC7424_3565 [Cyanothece sp. PCC 7424]
gi|218173222|gb|ACK71955.1| protein of unknown function DUF323 [Cyanothece sp. PCC 7424]
Length = 925
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 100/183 (54%), Gaps = 24/183 (13%)
Query: 9 LEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDE 68
LEK +E+ QKQ + +AKR+ K ER R EEE ++ R RR+E+
Sbjct: 384 LEKQHQEEEIQKQ-----RQAEAKRQAKLERQRR-------EEEAQRQAELDRQRREEE- 430
Query: 69 ENGSRRDRDRDRDRDKERHRRDRDRDRDR-----GRERERETERDRERSRERREKEKERE 123
++R + DR R +E +R + DR R ++R+ E +R + R+RRE+E +R+
Sbjct: 431 ---AQRQAELDRQRREEEAQRQAELDRQRREEEIQKQRQAEAKRQAKLERQRREEEAQRQ 487
Query: 124 R---RERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELER 180
R+RR+ E +R+ E D +RR ++ ++++R + R+ RE E++R+ EL+ +R
Sbjct: 488 AELDRQRREEEAQRQAELDRQRREEEIQKQRQAEAKRQAKLERQRREEEAQRQAELDRQR 547
Query: 181 ERE 183
E
Sbjct: 548 REE 550
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 28/196 (14%)
Query: 45 EDSEEEEEEEKSRSGKRSRRDEDE----ENGSRRDRDRDRDRDKERHRRDRDRDRDRGRE 100
E +EEE +K R + R+ + E E ++R + DR R +E +R + DR R
Sbjct: 385 EKQHQEEEIQKQRQAEAKRQAKLERQRREEEAQRQAELDRQRREEEAQRQAELDRQR--- 441
Query: 101 RERETERDRERSRERREKEKERER-----------RERRDREKERERERDGERRSSSRSR 149
RE E +R E R+RRE+E +++R R+RR+ E +R+ E D +RR R
Sbjct: 442 REEEAQRQAELDRQRREEEIQKQRQAEAKRQAKLERQRREEEAQRQAELDRQRREEEAQR 501
Query: 150 RSSSQSRRSSSRSRRE----RERESERERELELERERERERELRERERDLEMRESRRYKE 205
++ R RRE ++R++E +R+ +LER+R E R+ E D + RE K+
Sbjct: 502 QA------ELDRQRREEEIQKQRQAEAKRQAKLERQRREEEAQRQAELDRQRREEEIQKQ 555
Query: 206 KKEVVEPEADPERDQR 221
++ + +A ER +R
Sbjct: 556 RQAEAKRQAKLERQRR 571
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 100/194 (51%), Gaps = 27/194 (13%)
Query: 5 EYEYLEKTVEEQRQ-----------QKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEE 53
E ++ E+ +++QRQ Q++++++ + + R+ + E + R+ E + EE
Sbjct: 385 EKQHQEEEIQKQRQAEAKRQAKLERQRREEEAQRQAELDRQRREEEAQRQAELDRQRREE 444
Query: 54 EKSRSGKRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDR----DRGRERERETERDR 109
E R + R+ +EE +R + R ER RR+ + R DR R RE E +R
Sbjct: 445 EAQRQAELDRQRREEEIQKQRQAEAKRQAKLERQRREEEAQRQAELDRQR-REEEAQRQA 503
Query: 110 ERSRERREKEKERER-----------RERRDREKERERERDGERRSSSRSRRSSSQSRRS 158
E R+RRE+E +++R R+RR+ E +R+ E D +RR ++ ++++R
Sbjct: 504 ELDRQRREEEIQKQRQAEAKRQAKLERQRREEEAQRQAELDRQRREEEIQKQRQAEAKRQ 563
Query: 159 SSRSRRERERESER 172
+ R+ RE E+++
Sbjct: 564 AKLERQRREEEAQK 577
>gi|367041712|ref|XP_003651236.1| hypothetical protein THITE_2111279 [Thielavia terrestris NRRL 8126]
gi|346998498|gb|AEO64900.1| hypothetical protein THITE_2111279 [Thielavia terrestris NRRL 8126]
Length = 363
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
+Y G L + ++E + +F FG ++L D ETG+ KGFG++++ A L
Sbjct: 35 IYFGGLPYELSEGDIITIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 440 NGKLEIVGRTLKVSSV 455
G EI GR ++V
Sbjct: 95 GG-AEIGGRLIRVDHA 109
>gi|395506689|ref|XP_003757663.1| PREDICTED: death-inducer obliterator 1 [Sarcophilus harrisii]
Length = 2351
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 13/108 (12%)
Query: 33 REEKSERSYRKREDSEEEEEEEKSRSGKR---SRRDEDEENGSRRDRDRDRDRDKERHRR 89
R E+ E S +++ E E + ++R G+ RRD D RDR R+ RD+ER
Sbjct: 2157 RRERFEGSTKEKSSDEPESQLSENRQGRGFEDRRRDRDHAKPWERDRGRNWSRDRER--- 2213
Query: 90 DRDRDRDRGRERERETERDRERSRERREKEKERERRERRDREKERERE 137
D DR+RD R RE+++ RD +K KER +DRE ER +E
Sbjct: 2214 DWDRNRDWERHREKDSNRD-------WDKNKERNPNRDKDRESERNKE 2254
>gi|427783535|gb|JAA57219.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 401
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
L V NL + T L+++FE +G V V +P T + +GF FV+F + A +L
Sbjct: 16 LKVDNLTYRTTPEDLKRVFEKYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDCEDAMDSL 75
Query: 440 NGKLEIVGRTLKV 452
+G + + GR L+V
Sbjct: 76 DGYI-LDGRELRV 87
>gi|126314555|ref|XP_001362188.1| PREDICTED: TRAF3-interacting protein 1 isoform 1 [Monodelphis
domestica]
Length = 715
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 99/170 (58%), Gaps = 18/170 (10%)
Query: 35 EKSERSYRKREDSEEEEEEEKSRSGKRSRRDE--DEENGSRRDRDRDRDRDKERHRR--- 89
E+ R+++ +ED E +++S S +R ++E DEEN + RD+D+ER +
Sbjct: 156 EEDSRTHKDKEDRRISEIKDRSTSRERKIKEESKDEEN-------KPRDKDREREKSKDG 208
Query: 90 DRDRDRDRGRERERETERDRERSRERREKEKERER---RERRDREKERERER--DGERRS 144
DR+R +D R++ ++ ERDR ++R ++E+E+E+ R R +DRE ER++ER +G +
Sbjct: 209 DRERHKDPDRDKGKDVERDRNKNRVKQEREREKSRDKDRGNKDRELERDKERKIEGGKEK 268
Query: 145 SSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERE-LRERER 193
R + R ++++RE ++R + E RE E++ ++E+ER
Sbjct: 269 ERLKERDRERERERERERAKDKDREKRKDRTKDGEHSREHEKDKIKEQER 318
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 79/142 (55%), Gaps = 25/142 (17%)
Query: 21 QDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSR-RDEDEENGSRRDRDRD 79
+D +S ++K K E K E + + +D E EKS+ G R R +D D + G +RDR+
Sbjct: 174 KDRSTSRERKIKEESKDEENKPRDKD----REREKSKDGDRERHKDPDRDKGKDVERDRN 229
Query: 80 RDRDKERHRRDRDRDRDRGRERERETERDRERSRER-REKE------------------K 120
++R K+ R++ RD+DRG ++RE ERD+ER E +EKE K
Sbjct: 230 KNRVKQEREREKSRDKDRGN-KDRELERDKERKIEGGKEKERLKERDRERERERERERAK 288
Query: 121 ERERRERRDREKERERERDGER 142
+++R +R+DR K+ E R+ E+
Sbjct: 289 DKDREKRKDRTKDGEHSREHEK 310
>gi|255561192|ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis]
gi|223539286|gb|EEF40879.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis]
Length = 506
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
L+V L++ TE+++++ FE +GP++ V+L D + +G+ F+++ KAA
Sbjct: 140 LFVARLNYETTESRIKREFESYGPIKRVRLITDKAANKPRGYAFIEYMHTRDMKAAYKQA 199
Query: 440 NGKLEIVGRTLKV 452
+G+ ++ GR + V
Sbjct: 200 DGR-KLDGRRVLV 211
>gi|340975515|gb|EGS22630.1| hypothetical protein CTHT_0011020 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 367
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
+Y G L + ++E + +F FG ++L D ETG+ KGFG++++ A L
Sbjct: 35 IYFGGLPYELSEGDIITIFSQFGEPVFLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 440 NGKLEIVGRTLKV 452
+G EI GR ++V
Sbjct: 95 SGA-EIGGRLIRV 106
>gi|340382789|ref|XP_003389900.1| PREDICTED: hypothetical protein LOC100635457 [Amphimedon
queenslandica]
Length = 387
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 41/65 (63%)
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 437
+ L+VG ++F+ +E +LR+ FE +GPV+ + + D ++G+ +G+ FV++ +A
Sbjct: 102 KTLFVGRINFDTSEGKLRREFESYGPVKRINIVSDPKSGKPRGYAFVEYENERDMHSAYK 161
Query: 438 ALNGK 442
+GK
Sbjct: 162 YADGK 166
>gi|334312325|ref|XP_001376502.2| PREDICTED: death-inducer obliterator 1 [Monodelphis domestica]
Length = 2350
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 14/79 (17%)
Query: 63 RRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKER 122
RRD D RDR R+ RD+ER D DR+RD R RE+++ RD ++++ER
Sbjct: 2189 RRDRDHGKPWERDRGRNWSRDRER---DWDRNRDWERHREKDSNRDWDKNKERNP----- 2240
Query: 123 ERRERRDREKERERERDGE 141
+R+KERE ER+ E
Sbjct: 2241 ------NRDKERESERNKE 2253
>gi|170056240|ref|XP_001863941.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876010|gb|EDS39393.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 643
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 118/198 (59%), Gaps = 10/198 (5%)
Query: 13 VEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGS 72
E Q+ +K + K + +++ K+ER ++ + +++ + E+ + +++ R +D +
Sbjct: 426 TERQKDRKTERQKDRKTERQKDRKTERQKDRKPERQKDRKTERQK-DRKTERQKDRKTER 484
Query: 73 RRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRERRDREK 132
++DR +R +D+E R+ +DR R+++R+TER ++R ER++ E R++ E R ++
Sbjct: 485 QKDRKTERQKDRETERQ---KDRKTERQKDRKTERQKDRKTERQKTEDRRQKTEDRRQKT 541
Query: 133 ERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERE---LR 189
E R++ +RR + RR ++ RR + +++ E E +++R+ ++++R+ ER+
Sbjct: 542 EDRRQKTEDRRQKTEDRRQKTEDRRQKTERQKDTETERQKDRKTGIQKDRKTERQKDRKT 601
Query: 190 ERERDLEMRESRRYKEKK 207
ER++D R++ R K++K
Sbjct: 602 ERQKD---RKTERQKDRK 616
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 116/199 (58%), Gaps = 14/199 (7%)
Query: 27 SKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEEN-GSRRDRDRDRDRDKE 85
S K K E + +R +++D + E ++++ ++ R+ E +++ + R +DR +R K+
Sbjct: 404 SPKDRKTERQKDRKTERQKDRKTERQKDRKTERQKDRKTERQKDRKTERQKDRKPERQKD 463
Query: 86 RHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRERRDREKERERERDGERRSS 145
R + +R +DR R+++R+TER ++R ER +K+RE ++DR+ ER+++R ER+
Sbjct: 464 R-KTERQKDRKTERQKDRKTERQKDRKTER---QKDRETERQKDRKTERQKDRKTERQKD 519
Query: 146 SRSRRSSSQSRRSSSRSRRE-----RERESERERELELERER-ERERELRERERDLEMRE 199
++ R ++ RR + RR+ R++ +R ++ E R++ E R+ ER++D E
Sbjct: 520 RKTERQKTEDRRQKTEDRRQKTEDRRQKTEDRRQKTEDRRQKTEDRRQKTERQKDT---E 576
Query: 200 SRRYKEKKEVVEPEADPER 218
+ R K++K ++ + ER
Sbjct: 577 TERQKDRKTGIQKDRKTER 595
>gi|84468434|dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense]
Length = 506
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 437
+ L+V L + TE+++++ FE +G ++ V+L D E+ + +G+ F+++ KAA
Sbjct: 139 KTLFVARLSYETTESRIKREFESYGAIKRVRLVTDTESNKPRGYAFIEYLHTRDMKAAYK 198
Query: 438 ALNGKLEIVGRTLKV 452
+G+ +I GR + V
Sbjct: 199 QADGR-KIEGRRVLV 212
>gi|126314557|ref|XP_001362270.1| PREDICTED: TRAF3-interacting protein 1 isoform 2 [Monodelphis
domestica]
Length = 648
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 99/170 (58%), Gaps = 18/170 (10%)
Query: 35 EKSERSYRKREDSEEEEEEEKSRSGKRSRRDE--DEENGSRRDRDRDRDRDKERHRR--- 89
E+ R+++ +ED E +++S S +R ++E DEEN + RD+D+ER +
Sbjct: 156 EEDSRTHKDKEDRRISEIKDRSTSRERKIKEESKDEEN-------KPRDKDREREKSKDG 208
Query: 90 DRDRDRDRGRERERETERDRERSRERREKEKERER---RERRDREKERERER--DGERRS 144
DR+R +D R++ ++ ERDR ++R ++E+E+E+ R R +DRE ER++ER +G +
Sbjct: 209 DRERHKDPDRDKGKDVERDRNKNRVKQEREREKSRDKDRGNKDRELERDKERKIEGGKEK 268
Query: 145 SSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERE-LRERER 193
R + R ++++RE ++R + E RE E++ ++E+ER
Sbjct: 269 ERLKERDRERERERERERAKDKDREKRKDRTKDGEHSREHEKDKIKEQER 318
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 79/142 (55%), Gaps = 25/142 (17%)
Query: 21 QDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSR-RDEDEENGSRRDRDRD 79
+D +S ++K K E K E + + +D E E KS+ G R R +D D + G +RDR+
Sbjct: 174 KDRSTSRERKIKEESKDEENKPRDKDRERE----KSKDGDRERHKDPDRDKGKDVERDRN 229
Query: 80 RDRDKERHRRDRDRDRDRGRERERETERDRERSRER-REKE------------------K 120
++R K+ R++ RD+DRG ++RE ERD+ER E +EKE K
Sbjct: 230 KNRVKQEREREKSRDKDRGN-KDRELERDKERKIEGGKEKERLKERDRERERERERERAK 288
Query: 121 ERERRERRDREKERERERDGER 142
+++R +R+DR K+ E R+ E+
Sbjct: 289 DKDREKRKDRTKDGEHSREHEK 310
>gi|291241720|ref|XP_002740759.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Saccoglossus kowalevskii]
Length = 1091
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 58/115 (50%), Gaps = 13/115 (11%)
Query: 67 DEENGSRRDRDRDRDRDKER-HRRDRDRDRDRGRERERETERDRERSRERREKEKERERR 125
D R+RD R + KER HRR + ++RD R + +E R +SRER K R
Sbjct: 114 DHRRSKSRERDHRRSKSKERDHRRSKSKERDHRRSKSKEHVHRRSKSRERDHK-----RS 168
Query: 126 ERRDREKERERERDGERR---SSSRSRRSSSQSRRSSSRSRRERERESERERELE 177
RDRE +R R ERR S S+ RR S RS SR RR+ + R +E E
Sbjct: 169 RSRDRENKRSETRPQERRRSRSKSKERRKS----RSKSRERRQDRKSPSRIKERE 219
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 87 HRRDRDRDRDRGRERERETERDRERSRER-REKEKERERRERRDREKERERERDGERRSS 145
HRR + R+RD R + +E + R +S+ER + K +E RR + +ER+ +RS
Sbjct: 115 HRRSKSRERDHRRSKSKERDHRRSKSKERDHRRSKSKEHVHRRSKSRERD-----HKRSR 169
Query: 146 SRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELRERERDLEMR 198
SR R + R R RR R + ER + RER ++R+ R ++ E R
Sbjct: 170 SRDRENKRSETRPQER-RRSRSKSKERRKSRSKSRERRQDRKSPSRIKEREHR 221
>gi|357518361|ref|XP_003629469.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
gi|355523491|gb|AET03945.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
Length = 502
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 437
+ L+V L + TE+++++ FE +G ++ V+L D E+ + +G+ F+++ KAA
Sbjct: 135 KTLFVARLSYETTESRIKREFESYGAIKRVRLVTDAESNKPRGYAFIEYLHTRDMKAAYK 194
Query: 438 ALNGKLEIVGRTLKV 452
+G+ +I GR + V
Sbjct: 195 QADGR-KIEGRRVLV 208
>gi|325187692|emb|CCA22234.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 423
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 218 RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKG 263
RD RTVF Q+ K ERD+ ++F+K GK V LI D+ + RSKG
Sbjct: 5 RDHRTVFIGQLTQKVRERDLEKYFNKVGKTEHVLLIRDKFTNRSKG 50
>gi|83314969|ref|XP_730591.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23490359|gb|EAA22156.1| Drosophila melanogaster SD07741p [Plasmodium yoelii yoelii]
Length = 931
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 70/117 (59%), Gaps = 16/117 (13%)
Query: 78 RDRDRDKERHRR---DRDRDRDRGRERERETERDRERSRER-REKEKERERRERRDREKE 133
RDR+R+ ER R +RDR+R+ R+R RETERDR R ER R +E ER+R +R++
Sbjct: 693 RDRNRETERDRNREVERDRNREVERDRNRETERDRNREVERDRNRETERDRNREVERDRN 752
Query: 134 RERERDGERRSSSRSRRSSSQSRRSSSRSR-----RERERESERERELELERERERE 185
RE ERD R+R + R + R R R+R RE E++R E+E++R RE
Sbjct: 753 REVERD-------RNRETGRDRNRETGRDRNREVERDRNREMEKDRNREVEKDRNRE 802
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 70/118 (59%), Gaps = 14/118 (11%)
Query: 74 RDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRER-REKEKERERRERRDREK 132
RDR+R+ +RD+ R +RDR+R+ R+R RE ERDR R ER R +E ER+R +R++
Sbjct: 685 RDRNREVERDRNRET-ERDRNREVERDRNREVERDRNRETERDRNREVERDRNRETERDR 743
Query: 133 ERERERDGERRSSSRSRRSSSQSRRSSSRSR-----RERERESERERELELERERERE 185
RE ERD R+R R + R R R+R RE ER+R E+E++R RE
Sbjct: 744 NREVERD-------RNREVERDRNRETGRDRNRETGRDRNREVERDRNREMEKDRNRE 794
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 85/141 (60%), Gaps = 23/141 (16%)
Query: 74 RDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRER---REKEKERER---RER 127
RDR+R+ +RD+ R +RDR+R+ R+R RETERDR R ER RE E++R R R+R
Sbjct: 709 RDRNREVERDRNRET-ERDRNREVERDRNRETERDRNREVERDRNREVERDRNRETGRDR 767
Query: 128 -------RDREKERERERDGERRSSSRSRRSSSQSRRSSSRSR-----RERERESERERE 175
R+RE ER+R R+ E+ R+R R + R R R+R RE +R+R
Sbjct: 768 NRETGRDRNREVERDRNREMEK---DRNREVEKDRNRETGRDRNRETGRDRNREIDRDRN 824
Query: 176 LELERERERERELRERERDLE 196
E++R+R RE + R+R R++E
Sbjct: 825 REIDRDRNREID-RDRNREME 844
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 72/120 (60%), Gaps = 10/120 (8%)
Query: 74 RDRDRDRDRDKERH-RRDRDRD--RDRGRE----RERETERDRERSRER-REKEKERERR 125
RDR+R+ +RD+ R RDR+R+ +DR RE R RE ERDR R ER R +E ER+R
Sbjct: 645 RDRNREVERDRNREVERDRNREVEKDRNREVEKDRNREVERDRNREVERDRNRETERDRN 704
Query: 126 ERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERE 185
+R++ RE ERD R + R + R + + R+R RE ER+R E+ER+R RE
Sbjct: 705 REVERDRNREVERDRNRETERDRNREVERDR--NRETERDRNREVERDRNREVERDRNRE 762
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 10/124 (8%)
Query: 72 SRRDRDRDRDRDKERHRR---DRDRDRDRGRERERETERDRERSRER-REKEKERERRER 127
S R++ R R+R+ ER R +RDR+R+ R+R RE E+DR R E+ R +E ER+R
Sbjct: 631 SERNKKRPRNRETERDRNREVERDRNREVERDRNREVEKDRNREVEKDRNREVERDRNRE 690
Query: 128 RDREKERERERDGERR-SSSRSRRSSSQSRRSSSRSR-----RERERESERERELELERE 181
+R++ RE ERD R R+R R + R R R+R RE+ER+R E+ER+
Sbjct: 691 VERDRNRETERDRNREVERDRNREVERDRNRETERDRNREVERDRNRETERDRNREVERD 750
Query: 182 RERE 185
R RE
Sbjct: 751 RNRE 754
>gi|87130529|gb|ABD23908.1| U1 small nuclear ribonucleoprotein 70K [Oryza sativa Japonica
Group]
Length = 463
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 353 EAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLD 412
E +K QS+ +A G PY + L+V L++ +E ++++ FE +GP++ V+L D
Sbjct: 121 ELQKYDPQSDPNATGD---PY----KTLFVARLNYETSEHRVKREFEAYGPIKRVRLVTD 173
Query: 413 IETGQCKGFGFVQFAQLEHAKAAQSALNGK 442
ET + +G+ F+++ K A +G+
Sbjct: 174 KETNKPRGYAFIEYMHTRDMKNAYKQADGR 203
>gi|115480914|ref|NP_001064050.1| Os10g0115600 [Oryza sativa Japonica Group]
gi|78707654|gb|ABB46629.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|113638659|dbj|BAF25964.1| Os10g0115600 [Oryza sativa Japonica Group]
Length = 463
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 353 EAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLD 412
E +K QS+ +A G PY + L+V L++ +E ++++ FE +GP++ V+L D
Sbjct: 121 ELQKYDPQSDPNATGD---PY----KTLFVARLNYETSEHRVKREFEAYGPIKRVRLVTD 173
Query: 413 IETGQCKGFGFVQFAQLEHAKAAQSALNGK 442
ET + +G+ F+++ K A +G+
Sbjct: 174 KETNKPRGYAFIEYMHTRDMKNAYKQADGR 203
>gi|449514352|ref|XP_004177208.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulatory
glutamine/lysine-rich protein 1 [Taeniopygia guttata]
Length = 633
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 91/162 (56%), Gaps = 40/162 (24%)
Query: 64 RDEDEENGSRRDRDRDRDRDKERHR-RDRDRDRDRGRERERETERDRERSRERREKEKER 122
RD D+E R +DR+R+RDKER+R +D++RD++R ++RER ++DR++ ++R +++++
Sbjct: 396 RDRDKEKDRDRGKDRERERDKERNREKDKERDKERSKDRERARDKDRDKDKDREKEKEKD 455
Query: 123 ERRERR-------DREKERERERDGERRSSSRSR-------------------------- 149
+ +E+ DREKERE+ERD +R+ RSR
Sbjct: 456 KDKEKDKEEEKDGDREKEREKERDDKRKKIXRSRTPPRSYSFSRRSRSSSRERRKRKSRS 515
Query: 150 -----RSSSQSRRSSSRSRRERERESERERELELERERERER 186
++S ++R SSR+ R + E++RE + ER RER
Sbjct: 516 PSKSPKTSKTAKRKSSRTPSPRRNKKEKKRERDTNNER-RER 556
>gi|330803435|ref|XP_003289712.1| hypothetical protein DICPUDRAFT_56283 [Dictyostelium purpureum]
gi|325080222|gb|EGC33787.1| hypothetical protein DICPUDRAFT_56283 [Dictyostelium purpureum]
Length = 501
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 320 YRYIEFYDVMSVPMAIALSGQLLLGQPVMVK-PSEAEKNLVQSNTSAGGTATGPYGAID- 377
+ +IEF A+ G L + ++ P + +++ +NTSA T P D
Sbjct: 209 FAFIEFRTPEEATNAMRFDGITLKNYTLKIRRPKDYQQSNDPTNTSALPTIV-PTNVPDS 267
Query: 378 -RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQ 436
K++VG L N+ E Q++ L +G ++ L D TG KG+ F ++ + A
Sbjct: 268 EHKIFVGGLPSNLNEEQVKTLLSAYGKLKAFNLVKDTNTGISKGYAFCEYLDPDVTDQAC 327
Query: 437 SALNGKLEIVGRTLKV 452
++LNG + + + L V
Sbjct: 328 ASLNG-ISLADKNLIV 342
>gi|340057830|emb|CCC52181.1| conserved hypothetical protein, fragment [Trypanosoma vivax Y486]
Length = 935
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 17/165 (10%)
Query: 14 EEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSR 73
E++ + K+D+ ++ K +E++ER R++E+ ++ E+K +R +RDE EE R
Sbjct: 66 EKKERHKRDETEEERRARKEKERAERKAREKEEGGGDDGEKK----ERHKRDETEE--ER 119
Query: 74 RDRDRDRDRDKER-HRRDRDRDRDRGRERERETERDRERSRERREKEKERERRERRDREK 132
R R ++KER R+ R+++ G + E++ R+ + E R KE+ER ER+ REK
Sbjct: 120 RAR-----KEKERAERKAREKEEGGGDDGEKKERHKRDETEEERRARKEKERAERKAREK 174
Query: 133 ERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELE 177
E DGE++ R +R ++ R R+R+E+ER + RE E
Sbjct: 175 EEGGGDDGEKK--ERHKRDETEEER---RARKEKERAERKAREKE 214
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 102/184 (55%), Gaps = 19/184 (10%)
Query: 32 KREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRDKER-HRRD 90
K +E++ER R++E+ + E+K +R +RDE EE RR R ++KER R+
Sbjct: 45 KEKERAERKAREKEEGGGDNGEKK----ERHKRDETEE--ERRAR-----KEKERAERKA 93
Query: 91 RDRDRDRGRERERETERDRERSRERREKEKERERRERRDREKERERERDGERRSSSRSRR 150
R+++ G + E++ R+ + E R KE+ER ER+ REKE DGE++ R +R
Sbjct: 94 REKEEGGGDDGEKKERHKRDETEEERRARKEKERAERKAREKEEGGGDDGEKK--ERHKR 151
Query: 151 SSSQSRRSSSRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVV 210
++ R R+R+E+ER + RE E + E+ +ER + E E RR +++KE
Sbjct: 152 DETEEER---RARKEKERAERKAREKEEGGGDDGEK--KERHKRDETEEERRARKEKERA 206
Query: 211 EPEA 214
E +A
Sbjct: 207 ERKA 210
>gi|301605148|ref|XP_002932194.1| PREDICTED: hypothetical protein LOC100170167 [Xenopus (Silurana)
tropicalis]
Length = 502
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 91/166 (54%), Gaps = 23/166 (13%)
Query: 9 LEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRS----GKRSRR 64
LE+ E QR +++ K+ KR +ER ++ E +SRS R R
Sbjct: 283 LEREKERQRLERES------KEKKRSRSNERGLERKRSKSRERHRTRSRSRDRKADRRER 336
Query: 65 DEDEENGSRRDRDRDRDRDKERHRRDR--DRDRDRGRERERETE-RDRERSRERREKEKE 121
D+++EN +R R RD DK+ + RD+ DR RDR +ER R E +DRE R R +++
Sbjct: 337 DKEKEN----ERSRKRDYDKKGNGRDKEADRTRDRSKERRRSQEKKDREDKRHRDDRDSR 392
Query: 122 RERRERRDREKERERERDGERRSSSRSRRSSSQSR-RSSSRSRRER 166
+ERR R R K+R+ +R+S S S+ +SS++R RS RS R +
Sbjct: 393 KERRHSRSRSKDRK-----QRKSKSPSKNASSRARSRSKERSNRHK 433
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 79/134 (58%), Gaps = 14/134 (10%)
Query: 49 EEEEEEKSRSGKRS---RRDEDEENGSRRDRDRDR-----DRDKER-HRRDRDRDRDR-G 98
E +E+++SRS +R +R + E R R RDR +RDKE+ + R R RD D+ G
Sbjct: 295 ESKEKKRSRSNERGLERKRSKSRERHRTRSRSRDRKADRRERDKEKENERSRKRDYDKKG 354
Query: 99 RERERETERDRERSRERR---EKEKERERRERRDREKERERERDGERRSSSRSRRSSSQS 155
R++E +R R+RS+ERR EK+ ++R R DR+ +ER R + R+S S S
Sbjct: 355 NGRDKEADRTRDRSKERRRSQEKKDREDKRHRDDRDSRKERRHSRSRSKDRKQRKSKSPS 414
Query: 156 RRSSSRSR-RERER 168
+ +SSR+R R +ER
Sbjct: 415 KNASSRARSRSKER 428
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 79/132 (59%), Gaps = 7/132 (5%)
Query: 77 DRDRDRDKERHRRDRD-RDRDRGRERERETERDRERSRER-----REKEKERERRER-RD 129
DR+ +R+KER R +R+ +++ R R ER ER R +SRER R ++++ +RRER ++
Sbjct: 280 DRELEREKERQRLERESKEKKRSRSNERGLERKRSKSRERHRTRSRSRDRKADRRERDKE 339
Query: 130 REKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELR 189
+E ER R+RD +++ + R + + RS R R + +++ E +R + R+ R R
Sbjct: 340 KENERSRKRDYDKKGNGRDKEADRTRDRSKERRRSQEKKDREDKRHRDDRDSRKERRHSR 399
Query: 190 ERERDLEMRESR 201
R +D + R+S+
Sbjct: 400 SRSKDRKQRKSK 411
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 80/148 (54%), Gaps = 5/148 (3%)
Query: 44 REDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRDKERHR-RDRDRDRDRGRERE 102
RE E+E + R K +R E G R R + R+R + R R RDR DR R R++E
Sbjct: 281 RELEREKERQRLERESKEKKRSRSNERGLERKRSKSRERHRTRSRSRDRKADR-RERDKE 339
Query: 103 RETERDRERSRERREKEKERERRERRDREKERERERDGERRSSSRSR--RSSSQSRRSS- 159
+E ER R+R +++ +++E RDR KER R ++ + R R R R S + RR S
Sbjct: 340 KENERSRKRDYDKKGNGRDKEADRTRDRSKERRRSQEKKDREDKRHRDDRDSRKERRHSR 399
Query: 160 SRSRRERERESERERELELERERERERE 187
SRS+ ++R+S+ + R R R +E
Sbjct: 400 SRSKDRKQRKSKSPSKNASSRARSRSKE 427
>gi|195012259|ref|XP_001983554.1| GH15516 [Drosophila grimshawi]
gi|193897036|gb|EDV95902.1| GH15516 [Drosophila grimshawi]
Length = 1158
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 111/189 (58%), Gaps = 7/189 (3%)
Query: 27 SKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRDKER 86
SK+K +R ++ +RS ++ E + +E+ RS R+ E +++ R+ R ++R R KER
Sbjct: 419 SKEKRQRSKEKQRSKERQRSKERQRSKERHRSKDRATSKERQQSKERQQRQKERKRSKER 478
Query: 87 HR-RDRDRDRDRGRERERETERDRERSRER---REKEKERERRERRDREKERERERDGER 142
+ ++R R ++R R +ER ++R RS++R +EK + +ER + ++R + +ER + ER
Sbjct: 479 QKSKERLRSKERQRSKERLRSKERLRSKDRPKSKEKLRSKERLKSKERVRSKERFKSKER 538
Query: 143 RSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELRERERDLEMRESRR 202
S RS + R S +ER+R +R+R L ER R +ER LR +ER L +E R
Sbjct: 539 VKSKEVLRSKERQRSKERLSSKERQRSKDRQR-LSKERLRSKER-LRSKER-LRSKERLR 595
Query: 203 YKEKKEVVE 211
KE+++ E
Sbjct: 596 SKERQKSKE 604
>gi|390345979|ref|XP_789163.3| PREDICTED: uncharacterized protein LOC584197 [Strongylocentrotus
purpuratus]
Length = 1759
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 107/204 (52%), Gaps = 27/204 (13%)
Query: 12 TVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENG 71
T +E+ QK + + RE K E+ ++ D +++ + E+ R GK S ED E G
Sbjct: 1312 TPKEESCQKDEITKDGSRSKDRERKHEQHKERKSDHDKDRKNEQDR-GKDST--EDGEQG 1368
Query: 72 SRRDRDRDRDRDKER-----------------HRRDRDRDRDRGRERERETERDRERSRE 114
R+RDRD+++DK + H +DR R+RD GR+RER+ R R+ R
Sbjct: 1369 RERERDRDQEKDKGKDATVDGEQDRERERDREHEKDRGRERDHGRDRERDLRRVRDDERH 1428
Query: 115 RREKEKERERRERRDREKERERER-DGERRSSSRSRR--SSSQSRRSSSRSRRERERESE 171
R +++RE R +D E ++ER D E+ RR S + R R+R E +R +
Sbjct: 1429 R---DQDRENRHEKDGLPEVDQERYDSEKARYENERRYYESQRYERERERARHEADRGYD 1485
Query: 172 RERELELERERERERELRERERDL 195
RER+ +R+ RER +R RERD+
Sbjct: 1486 RERQRHPDRDILRER-VRYRERDV 1508
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 25/204 (12%)
Query: 25 SSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRDK 84
S KK +EE ++ ++ S ++ E K K + D D++ + +DR +D D
Sbjct: 1306 SGDKKGTPKEESCQKDEITKDGSRSKDRERKHEQHKERKSDHDKDRKNEQDRGKDSTEDG 1365
Query: 85 ERHR---RDRDRDRDRGRE----------RERETERDRERSRERREKEKERERRERRDRE 131
E+ R RDRD+++D+G++ RER+ E +++R RE R+ ++RER RR R+
Sbjct: 1366 EQGRERERDRDQEKDKGKDATVDGEQDRERERDREHEKDRGRE-RDHGRDRERDLRRVRD 1424
Query: 132 KERERERDGERRSSSRSRRSSSQSRRSSSRSRRERER---------ESERERELELERER 182
ER R++D E R Q R S ++R E ER E +R
Sbjct: 1425 DERHRDQDRENRHEKDGLPEVDQERYDSEKARYENERRYYESQRYERERERARHEADRGY 1484
Query: 183 ERERELRERERDLEMRESRRYKEK 206
+RER+ R +RD+ +RE RY+E+
Sbjct: 1485 DRERQ-RHPDRDI-LRERVRYRER 1506
>gi|395851493|ref|XP_003798288.1| PREDICTED: TRAF3-interacting protein 1 isoform 1 [Otolemur
garnettii]
Length = 695
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 74/112 (66%), Gaps = 5/112 (4%)
Query: 29 KKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRDKERHR 88
K AK EE R ++ +ED + E +E+S S +R +++E +E R++++D+ ++
Sbjct: 152 KNAKEEES--RIHKDKEDRKNSEIKERSTSRERKQKEELKEESKPREKEKDK---EKAKE 206
Query: 89 RDRDRDRDRGRERERETERDRERSRERREKEKERERRERRDREKERERERDG 140
DRDR +D R+R RE ER++ + R ++E+E++R+R + DREKERE++ +G
Sbjct: 207 NDRDRHKDAERDRHREGEREKSKGRAKQERERDRDRGKELDREKEREKKSEG 258
>gi|332028066|gb|EGI68117.1| Protein split ends [Acromyrmex echinatior]
Length = 4415
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDI-ETGQCKGFGFVQFAQLEHAKAAQ 436
R L++GNL ++T ++LRK FEPFG E+++ +DI + G + F Q++ + A
Sbjct: 464 RTLFIGNLEKDVTASELRKHFEPFG--EIIE--IDIKKQGAVSSYAFCQYSDIGSVVKAM 519
Query: 437 SALNG 441
+++G
Sbjct: 520 RSMDG 524
>gi|322791721|gb|EFZ15997.1| hypothetical protein SINV_11524 [Solenopsis invicta]
Length = 4232
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDI-ETGQCKGFGFVQFAQLEHAKAAQ 436
R L++GNL ++T ++LRK FEPFG E+++ +DI + G + F Q++ + A
Sbjct: 363 RTLFIGNLEKDVTASELRKHFEPFG--EIIE--IDIKKQGAVSSYAFCQYSDIGSVVKAM 418
Query: 437 SALNG 441
+++G
Sbjct: 419 RSMDG 423
>gi|326670258|ref|XP_003199176.1| PREDICTED: hypothetical protein LOC100536078 [Danio rerio]
Length = 1422
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 104/180 (57%), Gaps = 24/180 (13%)
Query: 29 KKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRDKERHR 88
K A+RE + +R + ++ E E E+E+ +R R R+ ++ ++ +KER R
Sbjct: 644 KAAERELEQQREFERQRQKEFEREKERMLEQERLRL---------REFEKQKEIEKERER 694
Query: 89 R-DRDRDRDRGRERERETERDRERSRERREKEKERERRERRDREKERERERDGERRSSSR 147
+ + +R R+ R+++RE E+ RE R+ +E E++RE + +R+ EK++E+ER+ +R
Sbjct: 695 QLELERQREIERQKQRELEKQREIERQ-KEIERQRELQRQRELEKQKEQEREKQRHL--- 750
Query: 148 SRRSSSQSRRSSSRSRRERERESERERELELEREREREREL---RERERDLEMRESRRYK 204
R+ +RE ER+ E ER+LE+ER++E E++ R+++ DL++ R K
Sbjct: 751 -------ERQKELDRQRELERQRELERQLEIERQKEIEKQKEFERQKQMDLDIERWTRQK 803
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 78/126 (61%), Gaps = 10/126 (7%)
Query: 89 RDRDRDRDRGRERERETERDRERSRER-----REKEKERERRERRDREKERERERDGERR 143
R+ ++ R+ R+R++E ER++ER E+ RE EK++E + R+R+ E ER+R+ ER
Sbjct: 648 RELEQQREFERQRQKEFEREKERMLEQERLRLREFEKQKEIEKERERQLELERQREIER- 706
Query: 144 SSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELRERERDLEMRESRRY 203
+ +R + R + ER+RE +R+RELE ++E+ERE++ R ER E+ R
Sbjct: 707 ---QKQRELEKQREIERQKEIERQRELQRQRELEKQKEQEREKQ-RHLERQKELDRQREL 762
Query: 204 KEKKEV 209
+ ++E+
Sbjct: 763 ERQREL 768
>gi|348503678|ref|XP_003439391.1| PREDICTED: WD repeat-containing protein 60 [Oreochromis niloticus]
Length = 1083
Score = 45.4 bits (106), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 65/121 (53%), Gaps = 10/121 (8%)
Query: 88 RRDRDRDRDRGRERERETERDRERSRER-REKEKERERRERRDREKERERERDGERRSSS 146
+ +RDRD++R R++E+E RDR+R RE R K ++ +ER+ E++RE DGERR
Sbjct: 129 KHERDRDKERHRDKEKERVRDRDRHREEDRSKRRDDGDKERKREEQDRELRDDGERRRHK 188
Query: 147 RSRRSSSQSRRSSSRSRRERERESERERELELERERERERELR-ERERDL---EMRESRR 202
SR R ++R RE ER + E E R + ER RD+ E +E R
Sbjct: 189 ESREVRGAQIEQHHREEKDRHRERERH-----QNEYEDTRNAKEERHRDMKHSEQKEDRE 243
Query: 203 Y 203
Y
Sbjct: 244 Y 244
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 20/102 (19%)
Query: 57 RSGKRSRRDEDEENGSRRDRDRDRD------RDKERHR-RDRDRDRDRG-RERERETERD 108
R K RRD +E++ RD++R RD RD++RHR DR + RD G +ER+RE E+D
Sbjct: 117 RENKEKRRDLEEKHERDRDKERHRDKEKERVRDRDRHREEDRSKRRDDGDKERKRE-EQD 175
Query: 109 RE-----------RSRERREKEKERERRERRDREKERERERD 139
RE SRE R + E+ RE +DR +ERER ++
Sbjct: 176 RELRDDGERRRHKESREVRGAQIEQHHREEKDRHRERERHQN 217
>gi|307200599|gb|EFN80740.1| Protein split ends [Harpegnathos saltator]
Length = 4415
Score = 45.4 bits (106), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDI-ETGQCKGFGFVQFAQLEHAKAAQ 436
R L++GNL ++T ++LRK FEPFG E+++ +DI + G + F Q++ + A
Sbjct: 382 RTLFIGNLEKDVTASELRKHFEPFG--EIIE--IDIKKQGAVSSYAFCQYSDIGSVVKAM 437
Query: 437 SALNG 441
+++G
Sbjct: 438 RSMDG 442
>gi|327275957|ref|XP_003222738.1| PREDICTED: hypothetical protein LOC100559599 [Anolis carolinensis]
Length = 439
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 53/93 (56%), Gaps = 8/93 (8%)
Query: 360 QSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCK 419
++T+A G A + L+V ++++ TE++LR+ FE +GP++ + + + +G+ +
Sbjct: 92 HNDTNAQGDAF-------KTLFVARVNYDTTESKLRREFEVYGPIKRIYMVYNKHSGKPR 144
Query: 420 GFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 452
G+ F+++ +A +GK +I GR + V
Sbjct: 145 GYAFIEYEHERDMHSAYKHADGK-KIDGRRVLV 176
>gi|56118714|ref|NP_001008126.1| U1 small nuclear ribonucleoprotein 70 kDa [Xenopus (Silurana)
tropicalis]
gi|82234425|sp|Q66II8.1|RU17_XENTR RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|51703810|gb|AAH81331.1| small nuclear ribonucleoprotein 70kDa (U1) [Xenopus (Silurana)
tropicalis]
gi|89268700|emb|CAJ82715.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen)
[Xenopus (Silurana) tropicalis]
Length = 471
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 437
+ L+V ++++ TE++LR+ FE +GP++ + + + +G+ +G+ F+++ +A
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 438 ALNGKLEIVGRTLKV 452
+GK +I GR + V
Sbjct: 163 HADGK-KIDGRRVLV 176
>gi|395851495|ref|XP_003798289.1| PREDICTED: TRAF3-interacting protein 1 isoform 2 [Otolemur
garnettii]
Length = 629
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 74/112 (66%), Gaps = 5/112 (4%)
Query: 29 KKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRDKERHR 88
K AK EE R ++ +ED + E +E+S S +R +++E +E R++++D+ ++
Sbjct: 152 KNAKEEES--RIHKDKEDRKNSEIKERSTSRERKQKEELKEESKPREKEKDK---EKAKE 206
Query: 89 RDRDRDRDRGRERERETERDRERSRERREKEKERERRERRDREKERERERDG 140
DRDR +D R+R RE ER++ + R ++E+E++R+R + DREKERE++ +G
Sbjct: 207 NDRDRHKDAERDRHREGEREKSKGRAKQERERDRDRGKELDREKEREKKSEG 258
>gi|195375174|ref|XP_002046378.1| GJ12538 [Drosophila virilis]
gi|194153536|gb|EDW68720.1| GJ12538 [Drosophila virilis]
Length = 1083
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 100/175 (57%), Gaps = 21/175 (12%)
Query: 43 KREDSEEEEEEEKSRSGKRSR-RDEDEENGSRRDRDRDRDRDKERHR---------RDRD 92
K +D +E +KS+ +RS+ R ++ + R R ++R R KER R + R
Sbjct: 450 KSKDRARSKERQKSKERQRSKERPKERQRSKERPRSKERQRSKERLRSKERLRSKEKPRS 509
Query: 93 RDRDRGRERERETER----DRERSRER-REKE----KERERRERRDREKERERERDGERR 143
+DR R +ER+R ER +R+RS+ER R KE KER+R + R R KER++ER ER+
Sbjct: 510 KDRHRSKERQRSVERPRSKERQRSKERLRSKERVRSKERQRSKERVRSKERQKERSAERQ 569
Query: 144 SSSRSRRSSSQSRRSSSRSRRERERESERERELELEREREREREL-RERERDLEM 197
S R S + +RS R +R +ER+ +ER +R+R +ER+ +ER R E+
Sbjct: 570 RSKVKER-SKERQRSKERVQRSKERQRSKERLRSKDRQRSKERQKSKERPRQGEV 623
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 110/193 (56%), Gaps = 22/193 (11%)
Query: 23 DDSSSKKK----AKREEKSERSYR--KREDSEEEEEEEKSRSGKRSRRDEDEENGSRRDR 76
+DSS++K+ ++R + ER R R ++E + +E+ RS +R+ E + + RR
Sbjct: 374 NDSSTEKREHSASRRHKSKERPTRTPPRRETERQRSKERQRSKQRAGSKERKRSKERRS- 432
Query: 77 DRDRDRDKERHR---RDRDRDRDRGRERERETERDRERSRER---REKEKERERRERRDR 130
+R R KER R ++R + +DR R +ER+ ++R+RS+ER R++ KER R + R R
Sbjct: 433 --ERQRSKERQRSLGKERQKSKDRARSKERQKSKERQRSKERPKERQRSKERPRSKERQR 490
Query: 131 EKERERERD---GERRSSSRSRRSSSQSRRSSSRSR-RERERESERERELELERERERER 186
KER R ++ + + S+ R S + +RS R R +ER+R ER R E R +ER+R
Sbjct: 491 SKERLRSKERLRSKEKPRSKDRHRSKERQRSVERPRSKERQRSKERLRSKERVRSKERQR 550
Query: 187 E---LRERERDLE 196
+R +ER E
Sbjct: 551 SKERVRSKERQKE 563
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 72/120 (60%), Gaps = 13/120 (10%)
Query: 76 RDRDRDRDKERHR---RDRDRDRDRGRERERETER----DRERSRER-REKEKERERRER 127
R +DR R KER R R R ++R R +ER R ER +R+RS+ER R KE+++ER
Sbjct: 508 RSKDRHRSKERQRSVERPRSKERQRSKERLRSKERVRSKERQRSKERVRSKERQKERSAE 567
Query: 128 RDR----EKERERERDGERRSSSRSRRSSSQSRRSSSRSR-RERERESERERELELERER 182
R R E+ +ER+R ER S+ R+ S + RS R R +ER++ ER R+ E+ +ER
Sbjct: 568 RQRSKVKERSKERQRSKERVQRSKERQRSKERLRSKDRQRSKERQKSKERPRQGEVAKER 627
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 102/181 (56%), Gaps = 16/181 (8%)
Query: 38 ERSYRKREDSEEEEEEEKSRS-GKRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRD 96
ER K SE + +E+ RS GK ++ +D R + ++R R KER + +R R ++
Sbjct: 423 ERKRSKERRSERQRSKERQRSLGKERQKSKDRARSKERQKSKERQRSKERPK-ERQRSKE 481
Query: 97 RGRERERETERDRERSRER-REKEKERERRERRDREKER--ERERDGERRSS-----SRS 148
R R +ER+ ++R RS+ER R KEK R + R +E++R ER R ER+ S S+
Sbjct: 482 RPRSKERQRSKERLRSKERLRSKEKPRSKDRHRSKERQRSVERPRSKERQRSKERLRSKE 541
Query: 149 RRSSSQSRRSSSRSR---RERERESERERELELERERERERELRERERDLEMRESRRYKE 205
R S + +RS R R R++ER +ER+R ER +ER+ R +ER +E +R KE
Sbjct: 542 RVRSKERQRSKERVRSKERQKERSAERQRSKVKERSKERQ---RSKERVQRSKERQRSKE 598
Query: 206 K 206
+
Sbjct: 599 R 599
>gi|298713809|emb|CBJ27181.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1141
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 553 PSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKR-------SAGFVY 605
P+ + L NM + D EI+GDV EEC +YG+VK V + G ++
Sbjct: 950 PTCVVRLSNMVEVEELADDTEYAEIKGDVVEECEQYGKVKSAEVPRPEDGKEVLGLGEIF 1009
Query: 606 LRFESTEAAASAQRAMHMRWFARRLISAIF 635
+ FE A + A+ R F + + A +
Sbjct: 1010 VEFEDVAGATKGRNALAGRKFGGKAVKATY 1039
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
L V NL ++T+ +R+L PFG ++ L L +G+ KG ++ +E+ + A S L
Sbjct: 851 LMVMNLPDSLTDDHVRELLSPFGELKKFNL-LKDSSGKSKGTAVFEYTDMENGQLALSGL 909
Query: 440 NG 441
+G
Sbjct: 910 SG 911
>gi|70941972|ref|XP_741209.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56519442|emb|CAH74487.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 635
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 72/125 (57%), Gaps = 23/125 (18%)
Query: 75 DRDRDRDRDKERHRR-DRDRDRDRGRERERETERDRERSRER-REKEKERERRERRDREK 132
DRDR+R+ D++R+R DRDR+R+ R+R RE +RDR R +R R +E +R+R DR++
Sbjct: 517 DRDRNREFDRDRNREFDRDRNREFDRDRNREMDRDRNREMDRDRNREMDRDRNREMDRDR 576
Query: 133 ERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELRERE 192
RE +RD R R+R RE +R+R E +R+R RE +R+
Sbjct: 577 NREMDRDRNREVD------------------RDRNREFDRDRNREFDRDRNRE---FDRD 615
Query: 193 RDLEM 197
R+ EM
Sbjct: 616 RNREM 620
>gi|156101519|ref|XP_001616453.1| U1 small nuclear ribonucleoprotein 70 kDa [Plasmodium vivax Sal-1]
gi|148805327|gb|EDL46726.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Plasmodium
vivax]
Length = 452
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 437
+ +++G L +++ E +L+K FE +G ++ V++ D + + KG+GF++F EH K+
Sbjct: 98 KTIFIGRLSYDVNEKKLKKEFEVYGKIKKVKIIYD-KNFKPKGYGFIEF---EHTKSFND 153
Query: 438 ALN 440
A N
Sbjct: 154 AYN 156
>gi|328865125|gb|EGG13511.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 662
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 380 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 439
+Y+ +L + TE QL F FG ++ +++ + G+ KG+ FV+ + E A A+ L
Sbjct: 139 VYISSLDWWTTEQQLETFFAEFGKLKTLKIFENELNGKSKGYAFVELSSNEQALQAKEKL 198
Query: 440 NGKLEIVGRTLKVSSVT 456
+ K +I GR + + +V+
Sbjct: 199 SDK-QINGREVTIKAVS 214
>gi|85111588|ref|XP_964008.1| hypothetical protein NCU02052 [Neurospora crassa OR74A]
gi|28925766|gb|EAA34772.1| predicted protein [Neurospora crassa OR74A]
gi|38566902|emb|CAE76206.1| related to TSM1-component of TFIID complex [Neurospora crassa]
Length = 1870
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 15/140 (10%)
Query: 25 SSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDR-DRD 83
+ S K++ + + Y E+E+ K R R R + E + S + R++DR D D
Sbjct: 1538 APSSPKSRMQSPAGNGYGSSGSYAEKEQRNKERDRDRERDRDRERDSSSKFREKDRNDHD 1597
Query: 84 KERHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRERRD-----------REK 132
+ER+R +R++++ RERER+ E DRE R R EKER+R + R+ R +
Sbjct: 1598 RERYRGGAEREKEKYRERERDRESDREHERPR---EKERDREKYRERGDRDSDRERDRPR 1654
Query: 133 ERERERDGERRSSSRSRRSS 152
E+ RE+ +R S R R++
Sbjct: 1655 EKYREKGTDRGDSDRGGRTT 1674
>gi|158289428|ref|XP_001687752.1| AGAP000003-PA [Anopheles gambiae str. PEST]
Length = 251
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 74/115 (64%), Gaps = 18/115 (15%)
Query: 77 DRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRER-REKEKERERRERRDREKERE 135
+R RDR+ ER R DR+ R+R+RETER R+R ER R++E ER+R DRE ER+
Sbjct: 95 ERQRDRETERQR-----DRETERQRDRETERQRDRETERQRDRETERQR----DRETERQ 145
Query: 136 RERDGERRSSSRSRRSSSQSRRSSSRSR-----RERERESERERELELERERERE 185
R+R+ ER R R + Q R + R R R+R+RE+ER+R+ E ER+R+RE
Sbjct: 146 RDRETER---QRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRE 197
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 70/104 (67%), Gaps = 14/104 (13%)
Query: 99 RERERETERDRERSRER-REKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRR 157
R+R+RETER R+R ER R++E ER+R DRE ER+R+R+ ER R R + Q R
Sbjct: 96 RQRDRETERQRDRETERQRDRETERQR----DRETERQRDRETER---QRDRETERQRDR 148
Query: 158 SSSRSR-----RERERESERERELELERERERERELRERERDLE 196
+ R R R+R+RE+ER+R+ E ER+R+RE E R+R+R+ E
Sbjct: 149 ETERQRDRETERQRDRETERQRDRETERQRDRETE-RQRDRETE 191
>gi|195135387|ref|XP_002012114.1| GI16794 [Drosophila mojavensis]
gi|193918378|gb|EDW17245.1| GI16794 [Drosophila mojavensis]
Length = 1128
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 101/181 (55%), Gaps = 18/181 (9%)
Query: 23 DDSSSKKKAKREEKSERSYRKRE------DSEEEEEEEKSRSGKRSRRDEDEENGSRRDR 76
+DSS+ + ++ +KS R+ +RE E + E K R G R R+ + + R R
Sbjct: 381 NDSSTDSRREKRDKSTRTPPRRETEKPTRSKERQRERSKQRLGSRERQRSKDARRNERHR 440
Query: 77 DRDRDRDKERHR-RDRDRDRDRGRERERETERDRERSRERREKEKERERRERRDREKER- 134
++R R KER + +DR R +R + +ER+ ++R+R +ER ++ KER+R + R R KER
Sbjct: 441 SKERQRSKERLKSKDRARSMERHKSKERQQSKERQRPKER-QRSKERQRSKERQRSKERL 499
Query: 135 ---ERERDGER-----RSSSRSRRSSSQSRRSSSRSR-RERERESERERELELERERERE 185
ER R ER R+ S+ R+ S + RS R R +ER R ER+R E R +ER+
Sbjct: 500 RSKERVRSKERLRSKERARSKERQRSKERVRSKERLRSKERARSKERQRSKERVRSKERQ 559
Query: 186 R 186
R
Sbjct: 560 R 560
>gi|223647752|gb|ACN10634.1| WD repeat-containing protein 60 [Salmo salar]
Length = 1090
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 79/144 (54%), Gaps = 21/144 (14%)
Query: 69 ENGSRRDRDRDRDRDKERHRRDRDRDRDRGRER-----ERETERDRERSRERREKEKERE 123
E S R DRDR R++ER RDRDR RE+ ERE ++ ER ++R +K+KER+
Sbjct: 184 ERDSERRSDRDRKRNEERAEGGRDRDRGHDREKRDGHKEREYVKESERYKDRSQKDKERK 243
Query: 124 RR----ERRDREKERE-RERDGERRSSSR------SRRSSSQSRRSSSRSRR-ERERESE 171
R E +++ERE RE+ G+ + ++ + +SRR SR ERER
Sbjct: 244 ERHTDKEHSGQKEEREYREQHGKEKEERERRHKERAQHDTGESRRHGGESREVERER-VH 302
Query: 172 RER---ELELERERERERELRERE 192
RER + E E +R++ RE R RE
Sbjct: 303 RERKGPDGEREGKRDKHRERRHRE 326
>gi|336463459|gb|EGO51699.1| hypothetical protein NEUTE1DRAFT_70654 [Neurospora tetrasperma FGSC
2508]
Length = 1870
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 15/90 (16%)
Query: 74 RDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRERRD---- 129
R++DR+ D D+ER+R +R++++ RERER+ E DRE R R EKER+R + R+
Sbjct: 1587 REKDRN-DSDRERYRGGAEREKEKYRERERDRESDREHERPR---EKERDREKYRERGDR 1642
Query: 130 -------REKERERERDGERRSSSRSRRSS 152
R +E+ RE+ +R S R R++
Sbjct: 1643 DSDRERDRPREKYREKGTDRGDSDRGGRTT 1672
>gi|350297324|gb|EGZ78301.1| hypothetical protein NEUTE2DRAFT_80725 [Neurospora tetrasperma FGSC
2509]
Length = 1870
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 15/90 (16%)
Query: 74 RDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRERRD---- 129
R++DR+ D D+ER+R +R++++ RERER+ E DRE R R EKER+R + R+
Sbjct: 1587 REKDRN-DSDRERYRGGAEREKEKYRERERDRESDREHERPR---EKERDREKYRERGDR 1642
Query: 130 -------REKERERERDGERRSSSRSRRSS 152
R +E+ RE+ +R S R R++
Sbjct: 1643 DSDRERDRPREKYREKGTDRGDSDRGGRTT 1672
>gi|341883737|gb|EGT39672.1| hypothetical protein CAEBREN_30591 [Caenorhabditis brenneri]
Length = 1195
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 81/145 (55%), Gaps = 16/145 (11%)
Query: 66 EDEENGSRRDRDRDRDRD----KERHRRDRDR-----DRDRGRERERETERDRERSRERR 116
EDE+ G +++++ +++ D ER R +DR D D + + +E+ R + +R+
Sbjct: 849 EDEKKGRKKEKNDEKNIDLSDSSERKERKKDRKYDEYDEDDRKSKSKESARKYDEDADRK 908
Query: 117 EKEKERERR--ERRDREKERERERDGERRSSSRSRRSSSQSRRSSSR--SRRERERESER 172
E++K RERR E D++KER+R+R E S + + + +R S+ R + ERE R
Sbjct: 909 ERKKGRERRGDEEHDKKKERKRDRSAEAYDSDKLQEPKIKIKREESKKEDRSDPEREKIR 968
Query: 173 ER---ELELERERERERELRERERD 194
R + E ER R+ +R R+R+RD
Sbjct: 969 RRDDYDKEKERRRDGDRNERDRKRD 993
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 24/148 (16%)
Query: 24 DSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRD 83
D +KK +++EK++ DS E +E +K R K DED+ ++ R D D
Sbjct: 847 DYEDEKKGRKKEKNDEKNIDLSDSSERKERKKDR--KYDEYDEDDRKSKSKESARKYDED 904
Query: 84 KERHRRDRDRDRDRGRERERETERDRERSRE--------------RREKEKERER----- 124
+R R + R+R E +++ ER R+RS E +RE+ K+ +R
Sbjct: 905 ADRKERKKGRERRGDEEHDKKKERKRDRSAEAYDSDKLQEPKIKIKREESKKEDRSDPER 964
Query: 125 ---RERRDREKERERERDGERRSSSRSR 149
R R D +KE+ER RDG+R R R
Sbjct: 965 EKIRRRDDYDKEKERRRDGDRNERDRKR 992
>gi|126317239|ref|XP_001381458.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Monodelphis domestica]
Length = 613
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%), Gaps = 5/46 (10%)
Query: 99 RERERETERDRERSRER-----REKEKERERRERRDREKERERERD 139
R RE+E +RDRER +ER R++EK+RER +D+EKE+E+ERD
Sbjct: 391 RLREKERDRDREREKERSKNKERDREKDRERDREKDQEKEQEKERD 436
>gi|307183144|gb|EFN70061.1| Protein split ends [Camponotus floridanus]
Length = 4330
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDI-ETGQCKGFGFVQFAQLEHAKAAQ 436
R L++GNL ++T ++LRK FE FG E+++ +DI + G + F Q++ + A
Sbjct: 379 RTLFIGNLEKDVTASELRKHFEQFG--EIIE--IDIKKQGAVSSYAFCQYSDIGSVVKAM 434
Query: 437 SALNG 441
+++G
Sbjct: 435 RSMDG 439
>gi|307166380|gb|EFN60517.1| Proactivator polypeptide [Camponotus floridanus]
Length = 2140
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 62/108 (57%), Gaps = 10/108 (9%)
Query: 7 EYLEKTVEEQR---QQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSR 63
E ++KT E+R +D D SK+K+++ EKS+RS R+ S +E++ +KS++G S
Sbjct: 1832 EVVKKTKREKRDGSTDSEDSDGESKRKSRKLEKSKRS---RKASTDEDKSDKSKAGSSSD 1888
Query: 64 RDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRER 111
++D+++ + + RDR + DR +DR R+R+ R+R
Sbjct: 1889 SEDDKKHSDKNKKSRDRTDSTD----DRSKDRKDSRKRDIAESDSRKR 1932
>gi|400601583|gb|EJP69226.1| pre-mRNA-splicing factor 38B [Beauveria bassiana ARSEF 2860]
Length = 812
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 9/77 (11%)
Query: 20 KQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENG------SR 73
+ DDDS S+ R+ +S + + D E + E+ + G+RSR E+ SR
Sbjct: 533 RHDDDSHSRS---RKHRSRKHSSRHGDEEVQHEKGTTGGGERSRSASPEDGAKKTSRHSR 589
Query: 74 RDRDRDRDRDKERHRRD 90
R+RD DR RDK+RHR D
Sbjct: 590 RERDSDRHRDKDRHRGD 606
>gi|320545415|ref|NP_001097475.2| CG7971, isoform F [Drosophila melanogaster]
gi|318069094|gb|ABW08438.2| CG7971, isoform F [Drosophila melanogaster]
Length = 1655
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 79/155 (50%), Gaps = 31/155 (20%)
Query: 79 DRDRDKERHR-----RDRDRDRDRGRERERETERDRERSRER-REKEKERERRE------ 126
DR R KE+HR + D+ RDR +R +E +R ER R + R++ KERER +
Sbjct: 726 DRQRSKEKHRPKDEQQSVDKRRDRSTDRSKENQRSNERQRSKERQRSKERERSKDRQRSR 785
Query: 127 ----------RRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESEREREL 176
+DR+ +ER+R ER+ S R S+ ++ S +R RE ++R+
Sbjct: 786 ERRRSKEGQLSKDRQGLKERQRSNERKRS--KERQPSKEKQRSRERQRSREPLQSKDRQR 843
Query: 177 ELERERERERELRE-------RERDLEMRESRRYK 204
ER+R RER +E RER + R+ RR++
Sbjct: 844 SKERQRSRERPAKEARPTRSPRERSSKSRDDRRHR 878
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 94/201 (46%), Gaps = 58/201 (28%)
Query: 33 REEKSERSYRKREDS-EEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRDKERHR-RD 90
RE K RS R E S + + + + RS R E E + R+R +DR R KE+HR RD
Sbjct: 588 RERKDTRSSRPLEASIDSRQRKPRERSAATPPRKEPERH---RERSKDRQRSKEKHRSRD 644
Query: 91 R--------------------DRDRDRGRERERETERDRERSRER-REKEKERERRE--- 126
R ++R R +ER+R ER +RS+ER R KE++R R +
Sbjct: 645 RLRSRERQRSRERQRSRERQRSKERQRSKERQRSIER--QRSKERQRSKERQRSRSKDAL 702
Query: 127 ---------------------RRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRE 165
+DR++ +E+ R + + S RR RS+ RS +E
Sbjct: 703 RCKEKPQCNEKERSRERRRSKSKDRQRSKEKHRPKDEQQSVDKRRD-----RSTDRS-KE 756
Query: 166 RERESERERELELERERERER 186
+R +ER+R E +R +ERER
Sbjct: 757 NQRSNERQRSKERQRSKERER 777
>gi|156093490|ref|XP_001612784.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148801658|gb|EDL43057.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1084
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 4/66 (6%)
Query: 74 RDRDRDRDRDKERHR-RDRDRDRDRGRERERETERDRERSRERREKEKERERRERRDREK 132
RD +RDR R+ ER R RD +RDR R ER+R +RD ER R RE E++R+R RDR +
Sbjct: 770 RDTERDRPREAERDRQRDVERDRPRETERDR--QRDAERDRP-RETERDRQRDAERDRPR 826
Query: 133 ERERER 138
E ERER
Sbjct: 827 ETERER 832
>gi|221053658|ref|XP_002258203.1| protein kinase [Plasmodium knowlesi strain H]
gi|193808036|emb|CAQ38740.1| protein kinase, putative [Plasmodium knowlesi strain H]
Length = 1367
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 61/125 (48%), Gaps = 25/125 (20%)
Query: 95 RDRGRERERETERDRERSRERREKE------KERERRERRDREKERERERDGERRSSSRS 148
RD G +RE+ RDRER + +EK+ KE+ E R + +RDG R SR
Sbjct: 1072 RDAGVQREKPPLRDRERVTDAKEKKGKTYKMKEQHMEEDHGRYGKYGTQRDGSFRGDSRW 1131
Query: 149 RR--SSSQSRRSSSRS-------------RRERERESERERELELERERERE---RELRE 190
RR SS +SR SS+R R R+ S ER + +R RERE R+ E
Sbjct: 1132 RREESSGRSRHSSTREGGGYHTNSYRGRVGRIRDSSSRAERSMH-DRSREREWYKRDYAE 1190
Query: 191 RERDL 195
R RD+
Sbjct: 1191 RGRDM 1195
>gi|357138246|ref|XP_003570708.1| PREDICTED: uncharacterized protein LOC100825209 [Brachypodium
distachyon]
Length = 806
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 28/102 (27%)
Query: 79 DRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRERRDREKERERER 138
+R+RDKE+ RRDRD+ ER+R R+K+KE+ER E+ DRE+E+ R +
Sbjct: 91 ERERDKEKERRDRDK------------ERNR-----NRDKDKEKERPEKEDREREKSRGK 133
Query: 139 D-----------GERRSSSRSRRSSSQSRRSSSRSRRERERE 169
D G+++ R + Q+ S+ R R ER +E
Sbjct: 134 DRQDADLSKSDEGDQKKGVDPPREAEQTSTSTLRERIERAKE 175
>gi|221052874|ref|XP_002261160.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|194247164|emb|CAQ38348.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 971
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 51/75 (68%), Gaps = 10/75 (13%)
Query: 74 RDRDRDRDRDKERH-RRDRDRD--RDRGRE----RERETERDRERSRER---REKEKERE 123
RDR R+ +RD++R RDR R+ RDR RE R+RE ERDR+R ER RE E++R+
Sbjct: 705 RDRPREAERDRQREAERDRQREAERDRPREAERDRQREAERDRQREAERDRQREAERDRQ 764
Query: 124 RRERRDREKERERER 138
R RDR++E ER+R
Sbjct: 765 REAERDRQREAERDR 779
>gi|380019745|ref|XP_003693763.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Apis
florea]
Length = 409
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 437
+ L+V ++++ +E++LR+ FE +GPV+ + + + G+ +G+ F+++ +A
Sbjct: 102 KTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTINGKPRGYAFIEYEHERDMHSAYK 161
Query: 438 ALNGKLEIVGRTLKV 452
+GK +I GR + V
Sbjct: 162 HADGK-KIDGRRVLV 175
>gi|340715914|ref|XP_003396452.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like [Bombus
terrestris]
gi|350396793|ref|XP_003484667.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Bombus
impatiens]
Length = 409
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 437
+ L+V ++++ +E++LR+ FE +GPV+ + + + G+ +G+ F+++ +A
Sbjct: 102 KTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTINGKPRGYAFIEYEHERDMHSAYK 161
Query: 438 ALNGKLEIVGRTLKV 452
+GK +I GR + V
Sbjct: 162 HADGK-KIDGRRVLV 175
>gi|47213693|emb|CAF94586.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1032
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 7/93 (7%)
Query: 58 SGKRSRRDEDEENGSR-RDRDRDRDRDKERHRRDRDRDRDRGRERERETERDR-ERSRER 115
+G+R R+ + E R +D++R RD++KER R ++D++R R E+ER R E S E
Sbjct: 119 TGRRDRKQDVVEKHERVKDKERHRDKEKERDARKEEKDKERRRHHRAESERRRQEESGEG 178
Query: 116 REKEKERERRERR-DREKE----RERERDGERR 143
K++ER++RE+ DRE+ RER+ D ERR
Sbjct: 179 GFKKQERDKREKHGDRERHTDEYRERKSDRERR 211
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 41/184 (22%)
Query: 44 REDSEEEEEEEKSRSGKRSRRDEDE--ENGSRRDRDR----DRDRDKERHRRDRDRD--- 94
RE E++ E+ + G R RR + E E ++R++DR DR+ R RRDR D
Sbjct: 37 REKKEDDRYAERRKEGSRDRRGDKERREETNKREQDRFGGADRNSHDSRERRDRRNDIEK 96
Query: 95 -------------------------RDRGRERERETERDRERSRERREKEKERE-RRERR 128
RDR ++ + ER +++ R R +KEKER+ R+E +
Sbjct: 97 REERDRRERDRALEGARYTYDSTGRRDRKQDVVEKHERVKDKERHR-DKEKERDARKEEK 155
Query: 129 DREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELEREREREREL 188
D+E+ R + ERR R+ S + R +RE+ +RER + RER+ +RE
Sbjct: 156 DKERRRHHRAESERR-----RQEESGEGGFKKQERDKREKHGDRERHTDEYRERKSDRER 210
Query: 189 RERE 192
RER
Sbjct: 211 RERH 214
>gi|195490501|ref|XP_002093167.1| GE20934 [Drosophila yakuba]
gi|194179268|gb|EDW92879.1| GE20934 [Drosophila yakuba]
Length = 1080
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%), Gaps = 6/66 (9%)
Query: 74 RDRDRDRDRDKERHR-RDRDRDRDRGRERERETERDRERSRERREKEKERERRERRDREK 132
R+R +DR R KE+HR RDR R ++R R +ER+ ++R RSRER ++ KER+R +EK
Sbjct: 404 RERSKDRQRSKEKHRSRDRLRSKERQRSKERQRSKERPRSRER-QRSKERQR----SKEK 458
Query: 133 ERERER 138
+R +ER
Sbjct: 459 QRSKER 464
>gi|383866115|ref|XP_003708517.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Megachile rotundata]
Length = 410
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 437
+ L+V ++++ +E++LR+ FE +GPV+ + + + G+ +G+ F+++ +A
Sbjct: 102 KTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTINGKPRGYAFIEYEHERDMHSAYK 161
Query: 438 ALNGKLEIVGRTLKV 452
+GK +I GR + V
Sbjct: 162 HADGK-KIDGRRVLV 175
>gi|328777938|ref|XP_623789.3| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa isoform 1
[Apis mellifera]
Length = 409
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 378 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 437
+ L+V ++++ +E++LR+ FE +GPV+ + + + G+ +G+ F+++ +A
Sbjct: 102 KTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTINGKPRGYAFIEYEHERDMHSAYK 161
Query: 438 ALNGKLEIVGRTLKV 452
+GK +I GR + V
Sbjct: 162 HADGK-KIDGRRVLV 175
>gi|218184050|gb|EEC66477.1| hypothetical protein OsI_32563 [Oryza sativa Indica Group]
Length = 485
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 20/103 (19%)
Query: 353 EAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVE------- 405
E +K QS+ +A G PY + L+V L++ +E ++++ FE +GP++
Sbjct: 121 ELQKYDPQSDPNATGD---PY----KTLFVARLNYETSEHRVKREFEAYGPIKRAWGFYI 173
Query: 406 ------LVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGK 442
LV+L D ET + +G+ F+++ K A +G+
Sbjct: 174 LGFIRLLVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGR 216
>gi|222612343|gb|EEE50475.1| hypothetical protein OsJ_30528 [Oryza sativa Japonica Group]
Length = 476
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 20/103 (19%)
Query: 353 EAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVE------- 405
E +K QS+ +A G PY + L+V L++ +E ++++ FE +GP++
Sbjct: 121 ELQKYDPQSDPNATGD---PY----KTLFVARLNYETSEHRVKREFEAYGPIKRAWGFYI 173
Query: 406 ------LVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGK 442
LV+L D ET + +G+ F+++ K A +G+
Sbjct: 174 LGFIRLLVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGR 216
>gi|348500896|ref|XP_003438007.1| PREDICTED: pre-mRNA-splicing factor 38B-like [Oreochromis
niloticus]
Length = 461
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 70/128 (54%), Gaps = 12/128 (9%)
Query: 49 EEEEEEKSRSGKRSR---RDEDEENGSRRDRDRDR----DRDKERHRRDRDRDRDRGRER 101
E +E+E+ RS+ RD ++ G+ R+R RD+ + D RH+ DR+R RD + +
Sbjct: 331 ERKEKERDGGDDRSKRKDRDHHKDRGTERERSRDKKSRGETDDRRHKDDRERHRDERKAK 390
Query: 102 ERETERDRERSRERREKEKERERRERRDREKERERERDGERRSSSRSR---RSSSQSRRS 158
R RER + +EK R+R R +ER+RERDGE+RS RSR RS Q S
Sbjct: 391 RSSRSRSRERRHKSGAEEKSRKR--ERSHSRERDRERDGEQRSHKRSRSKERSHHQRESS 448
Query: 159 SSRSRRER 166
+ SR R
Sbjct: 449 NDHSRHRR 456
>gi|118093986|ref|XP_001231650.1| PREDICTED: pre-mRNA-splicing factor 38B [Gallus gallus]
Length = 549
Score = 39.3 bits (90), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 16/80 (20%)
Query: 88 RRDRDRDRDRGRERERETERDRERSRERREKEKERE----------------RRERRDRE 131
+++RD D+DRG ERE++++R RERS+ER+ K E R +++R+
Sbjct: 368 KKERDYDKDRGSEREKDSDRSRERSKERKSKGDTEERRHRDDKDDKKHRDDKRDSKKERK 427
Query: 132 KERERERDGERRSSSRSRRS 151
R R R+ + RS SRS+ +
Sbjct: 428 HSRSRSRERKHRSRSRSKNT 447
>gi|328874773|gb|EGG23138.1| putative THO2 protein [Dictyostelium fasciculatum]
Length = 1181
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 16/98 (16%)
Query: 80 RDRDKERHRR-DRDRDRDRGRERERETERDRERSR------ERREKEKERERRERRDRE- 131
R+RD+ER ++ R+RDR+R E+ERE E+DRE R + REKEKERE+++R
Sbjct: 801 RERDREREQQLSRERDRERITEKEREREKDREVERDREREIQLREKEKEREKQDREKERE 860
Query: 132 --------KERERERDGERRSSSRSRRSSSQSRRSSSR 161
KERE R+ R ++R SSQS R R
Sbjct: 861 KERELQIIKEREAAREARDRENNRENNRSSQSDRKDLR 898
>gi|413957026|gb|AFW89675.1| hypothetical protein ZEAMMB73_900995 [Zea mays]
Length = 150
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 47/88 (53%), Gaps = 16/88 (18%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
M+FDEYEYLEKTVE + SS + ++K ERS R+R +EE + R K
Sbjct: 1 MDFDEYEYLEKTVE---AFAAPANGSSPPGSGYKDK-ERSSRRRSTGGDEERDNVERRSK 56
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHR 88
RSR +E RDRD+ERHR
Sbjct: 57 RSRPEE------------GRDRDRERHR 72
>gi|156392403|ref|XP_001636038.1| predicted protein [Nematostella vectensis]
gi|156223137|gb|EDO43975.1| predicted protein [Nematostella vectensis]
Length = 686
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 12/94 (12%)
Query: 7 EYLEKTVEEQRQQKQDDDSSSKKKAKREEKS-ERSYRKREDSEEEEEEEKSRSGKRSRRD 65
E K E Q+ Q + KR +S ER + +EDS + +E++ RS +R ++
Sbjct: 388 ESFAKVSESQQGQTTPSTLKGSRTIKRTSRSPER--KIKEDSVTKSDEDEGRSSERREKE 445
Query: 66 EDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGR 99
E + RD+D+D+ER R+D+ +DRDRGR
Sbjct: 446 E--------KKSRDKDKDRERERKDK-KDRDRGR 470
>gi|312381631|gb|EFR27339.1| hypothetical protein AND_06021 [Anopheles darlingi]
Length = 542
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 52/103 (50%), Gaps = 34/103 (33%)
Query: 96 DRGRERERETERDRERSRERREKEKERERRERRDREKERERERDGERRSSSRSRRSSSQS 155
DR R+RE E +R RER E E ER ++R+ E ER R
Sbjct: 285 DRVRKRELELDRARER-------ELELERAQKRELELERAR------------------- 318
Query: 156 RRSSSRSRRERERESERERELELEREREREREL-RERERDLEM 197
+RE E + RERELEL+R RERE EL R R+R+LE+
Sbjct: 319 -------KRELELDRVRERELELKRVRERELELERARKRELEL 354
>gi|320589364|gb|EFX01826.1| involucrin repeat protein [Grosmannia clavigera kw1407]
Length = 6207
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 57/91 (62%), Gaps = 12/91 (13%)
Query: 115 RREKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERER 174
+++ + ERE RR E ER+++ D ER + RR Q+ R + + + ERE+ER+R
Sbjct: 766 QKQADLERETERRRLVEAERQKQVDLERETE---RRRLIQAER---QKQLDLERETERQR 819
Query: 175 ELELERERERERELRERERDLEMRESRRYKE 205
+ +LE+ER+ R++ERDLE RE +R +E
Sbjct: 820 QADLEKERQ-----RQKERDLE-RERQRVRE 844
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.131 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,687,292,842
Number of Sequences: 23463169
Number of extensions: 446632840
Number of successful extensions: 13014406
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 82582
Number of HSP's successfully gapped in prelim test: 91261
Number of HSP's that attempted gapping in prelim test: 5488572
Number of HSP's gapped (non-prelim): 2685502
length of query: 647
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 498
effective length of database: 8,863,183,186
effective search space: 4413865226628
effective search space used: 4413865226628
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 80 (35.4 bits)