Query 006381
Match_columns 647
No_of_seqs 372 out of 2590
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 23:30:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006381.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006381hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9q_A Chaperone protein DNAK; 100.0 2E-104 5E-109 890.3 70.8 594 7-618 2-604 (605)
2 3d2f_A Heat shock protein homo 100.0 4E-104 1E-108 892.3 68.7 605 8-620 3-628 (675)
3 2kho_A Heat shock protein 70; 100.0 4E-103 1E-107 878.6 60.4 593 8-618 3-604 (605)
4 1yuw_A Heat shock cognate 71 k 100.0 5.4E-98 2E-102 829.7 52.1 553 1-559 1-553 (554)
5 2v7y_A Chaperone protein DNAK; 100.0 4.6E-87 1.6E-91 736.5 54.1 503 8-549 3-509 (509)
6 3i33_A Heat shock-related 70 k 100.0 8E-66 2.7E-70 554.0 45.6 382 6-388 22-403 (404)
7 3qfu_A 78 kDa glucose-regulate 100.0 1.3E-64 4.3E-69 543.1 45.2 377 7-387 18-394 (394)
8 4gni_A Putative heat shock pro 100.0 5.1E-63 1.8E-67 532.7 42.5 378 7-388 13-403 (409)
9 1dkg_D Molecular chaperone DNA 100.0 9.9E-62 3.4E-66 518.4 40.2 371 8-386 3-382 (383)
10 1jce_A ROD shape-determining p 100.0 4.3E-42 1.5E-46 361.0 21.4 311 7-387 3-327 (344)
11 4e81_A Chaperone protein DNAK; 100.0 3.6E-39 1.2E-43 311.1 26.4 215 398-618 2-216 (219)
12 1u00_A HSC66, chaperone protei 100.0 1.2E-36 4.1E-41 296.7 27.3 215 400-620 1-215 (227)
13 3n8e_A Stress-70 protein, mito 100.0 2.9E-32 9.8E-37 253.8 17.7 166 394-560 17-182 (182)
14 3h0x_A 78 kDa glucose-regulate 100.0 8.1E-30 2.8E-34 231.5 15.4 151 399-549 2-152 (152)
15 3dob_A Heat shock 70 kDa prote 100.0 5.1E-30 1.7E-34 232.3 12.6 151 399-549 2-152 (152)
16 3dqg_A Heat shock 70 kDa prote 100.0 9.1E-30 3.1E-34 230.4 9.4 150 399-549 2-151 (151)
17 2ych_A Competence protein PILM 100.0 1.6E-28 5.5E-33 261.0 17.4 300 7-365 13-334 (377)
18 2fsj_A Hypothetical protein TA 99.9 2.5E-28 8.4E-33 255.2 10.7 231 118-384 95-343 (346)
19 2op6_A Heat shock 70 kDa prote 99.9 1.2E-27 4.1E-32 218.8 13.7 151 399-549 2-152 (152)
20 3h1q_A Ethanolamine utilizatio 99.9 2.3E-26 7.8E-31 233.0 21.9 203 121-383 70-272 (272)
21 1k8k_A ARP3, actin-like protei 99.9 4.6E-26 1.6E-30 245.2 15.7 227 143-384 107-386 (418)
22 4a2a_A Cell division protein F 99.9 8.2E-26 2.8E-30 241.1 15.9 198 157-385 168-393 (419)
23 2fxu_A Alpha-actin-1, actin, a 99.9 6.8E-25 2.3E-29 232.3 16.7 306 7-384 5-348 (375)
24 2zgy_A Plasmid segregation pro 99.9 2.3E-22 7.8E-27 208.2 11.8 227 117-383 73-319 (320)
25 1q5l_A Chaperone protein DNAK; 99.9 6.2E-22 2.1E-26 175.8 12.2 119 394-512 14-132 (135)
26 1k8k_B ARP2, actin-like protei 99.8 2.1E-20 7.3E-25 198.8 6.3 214 144-384 105-363 (394)
27 4ehu_A Activator of 2-hydroxyi 99.8 2.6E-18 8.8E-23 174.0 16.7 183 168-387 68-256 (276)
28 3lof_A Heat shock 70 kDa prote 99.8 1.1E-18 3.6E-23 150.7 11.6 111 537-647 3-113 (113)
29 3js6_A Uncharacterized PARM pr 99.7 4.1E-17 1.4E-21 170.2 13.1 205 145-387 115-338 (355)
30 2p32_A Heat shock 70 kDa prote 99.7 9.9E-17 3.4E-21 139.7 7.9 107 539-647 14-120 (120)
31 1ud0_A HSC70, 70 kDa heat-shoc 99.6 7E-16 2.4E-20 133.2 6.8 107 541-647 2-113 (113)
32 4apw_A ALP12; actin-like prote 99.6 2E-16 6.8E-21 163.7 0.7 205 144-387 106-326 (329)
33 3dwl_A Actin-related protein 3 99.5 1E-14 3.5E-19 155.5 8.2 224 144-384 124-395 (427)
34 3qb0_A Actin-related protein 4 99.5 1.1E-13 3.7E-18 149.0 14.4 178 8-249 24-209 (498)
35 4fo0_A Actin-related protein 8 99.2 2E-09 7E-14 120.6 27.0 117 120-249 170-293 (593)
36 2d0o_A DIOL dehydratase-reacti 99.2 1.7E-11 5.7E-16 128.8 7.4 197 156-384 367-603 (610)
37 1nbw_A Glycerol dehydratase re 99.2 2.6E-11 8.9E-16 127.8 7.9 194 158-383 371-604 (607)
38 1hux_A Activator of (R)-2-hydr 98.8 3.3E-07 1.1E-11 91.6 19.1 74 309-387 185-258 (270)
39 2ews_A Pantothenate kinase; PA 98.3 4.5E-05 1.6E-09 75.9 19.3 47 337-383 237-286 (287)
40 4am6_A Actin-like protein ARP8 97.9 1.9E-05 6.6E-10 85.9 9.0 123 144-283 222-346 (655)
41 2i7n_A Pantothenate kinase 1; 97.2 0.0085 2.9E-07 61.2 16.1 70 309-383 279-358 (360)
42 1t6c_A Exopolyphosphatase; alp 97.1 0.0035 1.2E-07 63.5 11.8 78 159-243 100-177 (315)
43 3vgl_A Glucokinase; ROK family 97.0 0.021 7.3E-07 58.0 17.7 44 169-216 96-139 (321)
44 2ivn_A O-sialoglycoprotein end 96.8 0.27 9.4E-06 49.9 23.5 66 317-387 230-300 (330)
45 3r8e_A Hypothetical sugar kina 96.7 0.071 2.4E-06 54.1 18.6 48 337-384 261-318 (321)
46 4db3_A Glcnac kinase, N-acetyl 96.6 0.29 9.9E-06 49.6 22.3 47 337-383 270-324 (327)
47 3vov_A Glucokinase, hexokinase 96.6 0.36 1.2E-05 48.3 22.6 48 337-384 238-294 (302)
48 3l0q_A Xylulose kinase; xlylul 96.6 0.005 1.7E-07 67.8 9.1 85 302-388 408-492 (554)
49 2e2o_A Hexokinase; acetate and 96.5 0.45 1.5E-05 47.4 22.6 50 336-386 239-288 (299)
50 2itm_A Xylulose kinase, xylulo 96.5 0.005 1.7E-07 66.6 8.2 82 303-388 356-437 (484)
51 4bc3_A Xylulose kinase; transf 96.4 0.0072 2.5E-07 66.2 9.4 77 309-387 407-483 (538)
52 2zf5_O Glycerol kinase; hypert 96.3 0.0087 3E-07 64.9 9.1 79 304-388 365-443 (497)
53 3hz6_A Xylulokinase; xylulose, 96.3 0.0083 2.8E-07 65.3 8.8 79 303-388 374-453 (511)
54 3ll3_A Gluconate kinase; xylul 96.3 0.0088 3E-07 64.9 8.7 81 303-388 363-443 (504)
55 2ch5_A NAGK protein; transfera 96.2 1.2 4.2E-05 45.2 26.6 61 142-211 70-133 (347)
56 3i8b_A Xylulose kinase; strain 96.2 0.0068 2.3E-07 66.0 7.5 77 304-388 395-474 (515)
57 3g25_A Glycerol kinase; IDP007 95.9 0.012 3.9E-07 64.0 7.6 51 336-388 404-454 (501)
58 2qm1_A Glucokinase; alpha-beta 95.9 0.27 9.1E-06 49.7 17.5 48 337-384 263-320 (326)
59 3mdq_A Exopolyphosphatase; str 95.9 0.06 2E-06 54.4 12.3 78 160-243 93-170 (315)
60 3ifr_A Carbohydrate kinase, FG 95.8 0.01 3.5E-07 64.5 6.8 51 336-388 400-450 (508)
61 3jvp_A Ribulokinase; PSI-II, N 95.8 0.011 3.8E-07 65.3 7.1 81 303-388 409-490 (572)
62 3ezw_A Glycerol kinase; glycer 95.8 0.019 6.6E-07 62.6 8.9 51 336-388 402-452 (526)
63 2dpn_A Glycerol kinase; thermu 95.8 0.02 6.9E-07 62.0 9.0 80 304-388 368-448 (495)
64 4e1j_A Glycerol kinase; struct 95.8 0.0097 3.3E-07 64.9 6.2 51 336-388 425-475 (520)
65 3h3n_X Glycerol kinase; ATP-bi 95.7 0.013 4.6E-07 63.5 7.2 51 336-388 403-453 (506)
66 2p3r_A Glycerol kinase; glycer 95.7 0.013 4.3E-07 63.8 6.8 51 336-388 401-451 (510)
67 2d4w_A Glycerol kinase; alpha 95.5 0.018 6.3E-07 62.4 7.0 51 336-388 403-453 (504)
68 2w40_A Glycerol kinase, putati 95.3 0.023 7.9E-07 61.7 7.1 50 337-388 407-457 (503)
69 3cer_A Possible exopolyphospha 95.3 0.069 2.4E-06 54.6 10.1 81 160-243 106-191 (343)
70 2uyt_A Rhamnulokinase; rhamnos 95.2 0.027 9.3E-07 60.8 7.1 48 336-386 393-440 (489)
71 1z6r_A MLC protein; transcript 95.0 0.51 1.7E-05 49.4 16.4 50 337-386 335-394 (406)
72 1u6z_A Exopolyphosphatase; alp 94.9 0.069 2.3E-06 57.9 9.4 77 160-243 100-176 (513)
73 2ap1_A Putative regulator prot 94.7 1.3 4.4E-05 44.7 17.8 44 169-216 120-163 (327)
74 2hoe_A N-acetylglucosamine kin 94.7 1.8 6.2E-05 44.7 19.3 48 337-384 315-370 (380)
75 1z05_A Transcriptional regulat 94.1 1.1 3.9E-05 47.0 16.5 44 169-216 208-251 (429)
76 1woq_A Inorganic polyphosphate 93.2 0.97 3.3E-05 44.1 13.1 48 337-387 215-263 (267)
77 1sz2_A Glucokinase, glucose ki 93.1 7.5 0.00026 39.0 20.1 49 167-216 99-155 (332)
78 3h6e_A Carbohydrate kinase, FG 92.9 0.11 3.8E-06 55.8 6.1 71 309-385 362-435 (482)
79 1zc6_A Probable N-acetylglucos 92.6 8.6 0.00029 38.0 23.8 63 312-384 228-292 (305)
80 1bdg_A Hexokinase; phosphotran 89.9 12 0.00042 39.3 17.9 290 2-384 63-445 (451)
81 3bex_A Type III pantothenate k 88.4 1.3 4.5E-05 42.8 8.4 21 8-28 4-24 (249)
82 3hi0_A Putative exopolyphospha 86.4 1.2 4E-05 48.1 7.4 76 159-242 103-178 (508)
83 3qbx_A Anhydro-N-acetylmuramic 85.7 2.1 7E-05 43.6 8.3 74 310-386 260-337 (371)
84 3en9_A Glycoprotease, O-sialog 85.3 7.4 0.00025 42.1 13.2 204 142-380 72-297 (540)
85 3o8m_A Hexokinase; rnaseh-like 84.9 3.5 0.00012 43.8 9.9 58 155-218 184-243 (485)
86 3eno_A Putative O-sialoglycopr 82.8 3.4 0.00011 41.8 8.5 69 315-388 233-306 (334)
87 3mcp_A Glucokinase; structural 82.5 5.3 0.00018 40.8 10.0 22 6-27 8-29 (366)
88 2yhx_A Hexokinase B; transfera 82.1 2.5 8.5E-05 44.7 7.5 56 157-218 164-221 (457)
89 3cqy_A Anhydro-N-acetylmuramic 81.9 4.2 0.00014 41.3 8.7 74 309-386 266-343 (370)
90 3ifr_A Carbohydrate kinase, FG 81.5 0.89 3E-05 49.1 3.9 26 1-26 1-26 (508)
91 3vth_A Hydrogenase maturation 78.7 3 0.0001 46.9 7.0 66 318-388 680-750 (761)
92 3ttc_A HYPF, transcriptional r 78.4 5.5 0.00019 43.9 8.8 49 337-385 600-651 (657)
93 4g9i_A Hydrogenase maturation 77.4 4 0.00014 46.1 7.5 62 320-386 694-760 (772)
94 3i8b_A Xylulose kinase; strain 73.4 2.2 7.4E-05 46.1 3.9 23 1-25 1-23 (515)
95 3epq_A Putative fructokinase; 71.8 12 0.00042 36.9 8.9 49 337-385 225-289 (302)
96 2gup_A ROK family protein; sug 71.1 15 0.00053 35.8 9.4 49 337-385 228-287 (292)
97 3l0q_A Xylulose kinase; xlylul 70.6 2.6 8.9E-05 45.9 3.8 23 1-25 1-23 (554)
98 3aap_A Ectonucleoside triphosp 70.3 4.2 0.00014 41.4 5.0 20 198-217 139-158 (353)
99 3jvp_A Ribulokinase; PSI-II, N 70.3 2.5 8.4E-05 46.3 3.5 24 1-26 1-24 (572)
100 3ven_A O-carbamoyltransferase 69.3 12 0.00041 40.5 8.5 67 318-389 294-361 (576)
101 1iv0_A Hypothetical protein; r 68.1 3.7 0.00013 33.2 3.3 20 8-27 2-21 (98)
102 3hz6_A Xylulokinase; xylulose, 68.0 2.8 9.5E-05 45.2 3.3 20 6-25 4-23 (511)
103 3h3n_X Glycerol kinase; ATP-bi 67.1 3.8 0.00013 44.1 4.1 24 1-26 1-24 (506)
104 1nu0_A Hypothetical protein YQ 66.2 5.5 0.00019 34.5 4.2 20 8-27 4-23 (138)
105 3cj1_A Ectonucleoside triphosp 66.1 22 0.00075 37.4 9.6 20 198-217 189-208 (456)
106 4bc3_A Xylulose kinase; transf 65.7 3.9 0.00013 44.4 3.8 21 6-26 9-29 (538)
107 3ll3_A Gluconate kinase; xylul 65.2 3.7 0.00013 44.1 3.6 21 6-26 3-23 (504)
108 4htl_A Beta-glucoside kinase; 64.8 16 0.00055 35.9 8.0 50 337-386 238-292 (297)
109 3ezw_A Glycerol kinase; glycer 63.6 3.5 0.00012 44.6 3.0 19 7-25 4-22 (526)
110 2zqm_A Prefoldin beta subunit 62.4 47 0.0016 27.2 9.4 51 567-621 62-112 (117)
111 2p3r_A Glycerol kinase; glycer 62.0 3.9 0.00013 44.0 3.0 20 6-25 2-21 (510)
112 3h6e_A Carbohydrate kinase, FG 60.8 3.7 0.00013 43.8 2.5 20 6-25 5-24 (482)
113 2aa4_A Mannac kinase, putative 60.2 15 0.0005 35.9 6.7 47 337-383 234-286 (289)
114 2uyt_A Rhamnulokinase; rhamnos 59.7 4.4 0.00015 43.3 2.9 19 7-25 4-22 (489)
115 4e1j_A Glycerol kinase; struct 59.3 5 0.00017 43.3 3.2 19 7-25 26-44 (520)
116 2dpn_A Glycerol kinase; thermu 58.4 5 0.00017 42.9 3.1 19 7-25 2-20 (495)
117 1cza_N Hexokinase type I; stru 57.4 37 0.0013 39.2 10.3 57 155-217 630-689 (917)
118 2w40_A Glycerol kinase, putati 57.3 5.3 0.00018 42.8 3.0 20 7-26 4-23 (503)
119 3djc_A Type III pantothenate k 56.9 7.6 0.00026 37.7 3.8 21 8-28 3-23 (266)
120 1vhx_A Putative holliday junct 56.6 5.7 0.00019 34.9 2.6 19 8-26 4-22 (150)
121 3g25_A Glycerol kinase; IDP007 56.0 5.9 0.0002 42.4 3.1 19 7-25 6-24 (501)
122 3hm8_A Hexokinase-3; glucose, 55.3 41 0.0014 35.1 9.2 130 2-210 54-211 (445)
123 3htv_A D-allose kinase, alloki 55.2 36 0.0012 33.5 8.7 49 337-385 240-299 (310)
124 1hjr_A Holliday junction resol 54.7 13 0.00044 32.9 4.6 18 8-25 2-19 (158)
125 2zf5_O Glycerol kinase; hypert 53.6 7.1 0.00024 41.8 3.2 20 7-26 3-22 (497)
126 1zbs_A Hypothetical protein PG 50.9 15 0.00052 35.9 5.0 68 311-386 211-281 (291)
127 1cza_N Hexokinase type I; stru 49.6 41 0.0014 38.8 9.0 57 155-217 182-241 (917)
128 2nr5_A Hypothetical protein SO 48.7 61 0.0021 22.2 6.0 22 569-590 42-63 (67)
129 1saz_A Probable butyrate kinas 48.2 39 0.0013 34.5 7.8 48 336-383 295-346 (381)
130 4fla_A Regulation of nuclear P 47.8 61 0.0021 28.2 7.7 66 542-618 78-146 (152)
131 3zx3_A Ectonucleoside triphosp 45.6 22 0.00077 37.2 5.4 44 173-217 151-199 (452)
132 3f9m_A Glucokinase; hexokinase 44.5 60 0.0021 34.1 8.5 55 155-215 183-240 (470)
133 4ep4_A Crossover junction endo 44.0 20 0.00069 31.9 4.1 18 8-25 2-19 (166)
134 3cet_A Conserved archaeal prot 43.9 13 0.00044 37.1 3.1 72 303-382 243-321 (334)
135 2itm_A Xylulose kinase, xylulo 43.8 13 0.00045 39.4 3.5 17 9-25 2-18 (484)
136 2d4w_A Glycerol kinase; alpha 43.5 11 0.00039 40.2 2.9 18 8-25 3-20 (504)
137 1nfn_A Apolipoprotein E3; lipi 41.5 1E+02 0.0034 28.0 8.5 66 538-620 105-170 (191)
138 3epq_A Putative fructokinase; 41.2 53 0.0018 32.2 7.3 44 169-216 97-140 (302)
139 3nmd_A CGMP dependent protein 40.9 65 0.0022 24.1 5.7 43 525-569 29-71 (72)
140 1nbw_A Glycerol dehydratase re 40.9 11 0.00038 40.3 2.2 32 144-175 131-162 (607)
141 1zbs_A Hypothetical protein PG 40.0 19 0.00066 35.1 3.8 61 142-211 59-121 (291)
142 3zyy_X Iron-sulfur cluster bin 40.0 44 0.0015 36.5 6.7 83 299-382 498-581 (631)
143 1msz_A DNA-binding protein smu 37.1 28 0.00096 27.1 3.4 28 146-173 34-61 (86)
144 3o8m_A Hexokinase; rnaseh-like 35.7 98 0.0033 32.7 8.5 30 197-226 78-108 (485)
145 2q2r_A Glucokinase 1, putative 35.5 56 0.0019 33.0 6.6 21 6-26 28-48 (373)
146 2yhw_A Bifunctional UDP-N-acet 34.7 1.1E+02 0.0037 30.4 8.5 44 169-216 131-174 (343)
147 2ra1_A Surface layer protein; 34.6 58 0.002 32.8 6.0 69 543-611 159-227 (412)
148 2yhx_A Hexokinase B; transfera 33.0 1.7E+02 0.0059 30.5 9.9 52 197-248 59-116 (457)
149 2h3g_X Biosynthetic protein; p 32.4 30 0.001 33.4 3.7 71 304-384 181-251 (268)
150 1zxo_A Conserved hypothetical 32.4 19 0.00063 35.3 2.2 65 312-383 210-276 (291)
151 1zxo_A Conserved hypothetical 31.1 7.2 0.00025 38.3 -1.1 59 143-210 58-118 (291)
152 2dfs_A Myosin-5A; myosin-V, in 30.8 1.8E+02 0.0061 34.2 10.4 8 159-166 174-181 (1080)
153 2a01_A Apolipoprotein A-I; fou 30.4 20 0.00068 34.2 1.9 47 569-615 167-213 (243)
154 1saz_A Probable butyrate kinas 30.0 38 0.0013 34.6 4.1 21 7-27 2-22 (381)
155 3tso_C RAB11 family-interactin 28.7 1.6E+02 0.0055 22.0 6.1 41 513-559 11-51 (75)
156 3fcg_A F1 capsule-anchoring pr 27.6 1.9E+02 0.0064 22.6 6.8 54 444-511 27-80 (90)
157 3cet_A Conserved archaeal prot 27.6 37 0.0013 33.8 3.3 39 173-217 107-145 (334)
158 3nuw_A 2-OXO-3-deoxygalactonat 25.6 42 0.0014 32.9 3.3 44 338-384 248-291 (295)
159 3htv_A D-allose kinase, alloki 25.3 33 0.0011 33.9 2.6 20 6-25 6-25 (310)
160 3lay_A Zinc resistance-associa 24.7 3.7E+02 0.013 23.8 9.6 65 514-588 66-130 (175)
161 3f9m_A Glucokinase; hexokinase 24.6 2E+02 0.0068 30.1 8.4 25 197-221 75-99 (470)
162 1gs9_A Apolipoprotein E, APOE4 23.7 3.7E+02 0.013 23.5 9.9 65 514-586 83-147 (165)
163 1hnj_A Beta-ketoacyl-acyl carr 23.4 79 0.0027 30.9 5.0 47 312-361 213-259 (317)
164 4am6_A Actin-like protein ARP8 23.3 32 0.0011 37.6 2.1 24 337-360 501-524 (655)
165 1kcf_A Hypothetical 30.2 KD pr 22.5 91 0.0031 29.8 4.9 33 7-49 40-72 (258)
166 3s84_A Apolipoprotein A-IV; fo 21.8 4.3E+02 0.015 25.3 9.7 15 545-559 72-86 (273)
167 1vh6_A Flagellar protein FLIS; 21.6 2.5E+02 0.0085 24.1 7.1 66 542-618 53-119 (145)
168 2f9w_A Pantothenate kinase; CO 21.5 65 0.0022 31.1 3.7 21 8-28 24-45 (271)
169 4htl_A Beta-glucoside kinase; 21.0 51 0.0017 32.2 3.0 44 169-216 97-140 (297)
170 4gic_A HDH, histidinol dehydro 20.9 99 0.0034 31.7 5.0 73 143-216 160-248 (423)
171 3t69_A Putative 2-dehydro-3-de 20.7 64 0.0022 32.1 3.5 47 338-387 260-306 (330)
172 2yhw_A Bifunctional UDP-N-acet 20.1 53 0.0018 32.7 2.9 22 7-28 30-52 (343)
No 1
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=1.5e-104 Score=890.31 Aligned_cols=594 Identities=51% Similarity=0.800 Sum_probs=561.9
Q ss_pred CCEEEEecCccceEEEEEECCeeEEEecCCCCcccceEEEEcC-CceEecHHHHHHHhhCcCchHHhhHHhhCCCCCChh
Q 006381 7 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTD-SERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDAT 85 (647)
Q Consensus 7 ~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~-~~~~~G~~A~~~~~~~p~~~~~~~k~~lg~~~~~~~ 85 (647)
+.+||||||||||+||++++|.++++.|..|++++||+|+|.+ +++++|..|+.+...+|.++++++|||||++++++.
T Consensus 2 ~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 81 (605)
T 4b9q_A 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (605)
T ss_dssp CCEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSHH
T ss_pred CcEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCHH
Confidence 4699999999999999999999999999999999999999975 589999999999999999999999999999999999
Q ss_pred hhhcccCCCeEEEecCCCcceEEEEEcCceeEEeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHH
Q 006381 86 VQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDA 165 (647)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~~~~~qr~~l~~A 165 (647)
++...+.+||++....++...+.+ . ...++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++|
T Consensus 82 v~~~~~~~p~~~~~~~~g~~~~~~--~--~~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~A 157 (605)
T 4b9q_A 82 VQRDVSIMPFKIIAADNGDAWVEV--K--GQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDA 157 (605)
T ss_dssp HHHHHTTCSSEEEECTTSBEEEEE--T--TEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEEcCCCceEEEE--C--CEEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 999999999999987777666544 3 358999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEEEEeC----CeEEEEEeeCCCCCChHHHHH
Q 006381 166 GVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEE----GIFEVKATAGDTHLGGEDFDN 241 (647)
Q Consensus 166 a~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~----~~~~v~~~~~~~~lGG~~~d~ 241 (647)
++.|||+++++++||+|||++|++.... .+.++||||+||||||+|++++.+ +.++++++.++.++||.+||+
T Consensus 158 a~~AGl~v~~li~EP~AAAlaygl~~~~---~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~ 234 (605)
T 4b9q_A 158 GRIAGLEVKRIINEPTAAALAYGLDKGT---GNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDS 234 (605)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHHHTTSCC---SSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHH
T ss_pred HHHcCCceEEEeCcHHHHHHHhhhhccC---CCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHH
Confidence 9999999999999999999999887653 578999999999999999999988 899999999999999999999
Q ss_pred HHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCCcEEEEEccccCC----ceeEEeecHHHHHHHHHHHHH
Q 006381 242 RMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEG----IDFYSPITRARFEELNMDLFR 317 (647)
Q Consensus 242 ~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~~----~d~~~~itr~~fe~~~~~~~~ 317 (647)
+|++|+.++|.++++.++..+++.+.+|+.+||++|+.||....+.+.++.+..+ .++.+.|||++|++++.|+++
T Consensus 235 ~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~ 314 (605)
T 4b9q_A 235 RLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVN 314 (605)
T ss_dssp HHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHH
Confidence 9999999999999998888899999999999999999999999988888766543 678899999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHHHHHHHHcCCCCccccce
Q 006381 318 KCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDL 397 (647)
Q Consensus 318 ~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~~~~~~~~~~~~~ 397 (647)
++..+|+++|+++++...+|+.|+||||+||+|+|++.|++.| +.++....||++|||+|||++|+.+++. .+++
T Consensus 315 ~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAai~a~~l~~~----~~~~ 389 (605)
T 4b9q_A 315 RSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDV 389 (605)
T ss_dssp HTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHH-TSCCCSSSCTTTHHHHHHHHHHHHHHTS----SCSE
T ss_pred HHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHh-ccCcCCCcChhHHHHHhHHHHHHHhcCC----CCce
Confidence 9999999999999999999999999999999999999999999 6888899999999999999999999875 5689
Q ss_pred EEEeeecccceEEeeCCEEEEEEeCCCCCCCcceEEeeeccCCCCcEEEEEeecccccccCCccceeEEecCCCCCCCCC
Q 006381 398 LLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGV 477 (647)
Q Consensus 398 ~~~d~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~~~g~ 477 (647)
.+.|++|++||+++.+|.|.+|||||++||++++++|++..|+|+.+.|.+|||++..+.+|..||+|.|.|+||.|+|.
T Consensus 390 ~l~dv~p~slgie~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~ 469 (605)
T 4b9q_A 390 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGM 469 (605)
T ss_dssp EEECBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTC
T ss_pred EEEeeeeeEEEEEEcCCEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEEEeCCCCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEEEEcCCceEEEEEeeccCCcceeEEEecCCCCCCHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHh
Q 006381 478 PQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRN 557 (647)
Q Consensus 478 ~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~ls~~e~~~~~~~~~~~~~~d~~~~~~~~a~n~lE~~i~~~r~ 557 (647)
++|+|+|++|.||+|+|++.++.||++.+++|++.. .||++|++++.++++++..+|++.+++.++||+||+|+|.+++
T Consensus 470 ~~i~v~f~id~~gil~v~a~~~~tg~~~~i~i~~~~-~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~ 548 (605)
T 4b9q_A 470 PQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASS-GLNEDEIQKMVRDAEANAEADRKCEELVQTRNQGDHLLHSTRK 548 (605)
T ss_dssp CCEEEEEEECTTSCEEEEEEETTTCCEECCEEESCC-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEEcCCcEEEEEEEecCCCcEEEEEecCCC-CCCHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998864 6999999999999999999999999999999999999999999
Q ss_pred hccchhhcCCCCHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHhc
Q 006381 558 TVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 618 (647)
Q Consensus 558 ~l~~~~~~~~~~~~~~~~i~~~l~~~~~wl~~~~~~~~~~~~~k~~~l~~~~~~i~~r~~e 618 (647)
.|++ +..++++++++.+...++++++||+.+ +.++|++++++|++.++||..++++
T Consensus 549 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 4b9q_A 549 QVEE--AGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHH--HGGGSCHHHHHHHHHHHHHHHHHHHSS---CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHh--hhhhCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9975 778899999999999999999999977 7999999999999999999999876
No 2
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=4.2e-104 Score=892.27 Aligned_cols=605 Identities=28% Similarity=0.476 Sum_probs=564.3
Q ss_pred CEEEEecCccceEEEEEECCeeEEEecCCCCcccceEEEEcCCceEecHHHHHHHhhCcCchHHhhHHhhCCCCCChhhh
Q 006381 8 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQ 87 (647)
Q Consensus 8 ~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~~lg~~~~~~~~~ 87 (647)
.+||||||||||+||++.+|.++++.|+.|++++||+|+|.+++++||..|+.+...+|.++++++||+||+.++++.++
T Consensus 3 ~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~ 82 (675)
T 3d2f_A 3 TPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDFE 82 (675)
T ss_dssp CCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTTHH
T ss_pred cEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCeEEEecCCCcceEEEEEcCceeEEeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHHH
Q 006381 88 SDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGV 167 (647)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~~~~~qr~~l~~Aa~ 167 (647)
...+.+||++....++...+.+.+.++...++|+++++++|++|++.|+.+++..+.++|||||++|++.||+++++|++
T Consensus 83 ~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~ 162 (675)
T 3d2f_A 83 QESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAAR 162 (675)
T ss_dssp HHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHH
Confidence 99999999999877888888888778778899999999999999999999999999999999999999999999999999
Q ss_pred HcCCceeEecChhHHHHhcccccccccC---CCCeeEEEEEeCCCceEEEEEEEeCCeEEEEEeeCCCCCChHHHHHHHH
Q 006381 168 IAGLNVMRIINEPTAAAIAYGLDKKATS---VGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMV 244 (647)
Q Consensus 168 ~AGl~~~~li~Ep~Aaa~~y~~~~~~~~---~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~ 244 (647)
.|||+++++++||+|||++|++.+.... ..+.++||||+||||||+|++++.++.++++++.++..+||++||+.|+
T Consensus 163 ~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l~ 242 (675)
T 3d2f_A 163 IAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAIT 242 (675)
T ss_dssp HTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHH
T ss_pred HcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHHHH
Confidence 9999999999999999999988653211 3578999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCCcEEEEEccccCCceeEEeecHHHHHHHHHHHHHHHHHHHH
Q 006381 245 NHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSPITRARFEELNMDLFRKCMEPVE 324 (647)
Q Consensus 245 ~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~~~d~~~~itr~~fe~~~~~~~~~~~~~i~ 324 (647)
+|+.++|.++++.++..+++++.+|+.+||++|+.||.+..+.+.++.+.++.++.+.|||++|+++|.|+++++..+|+
T Consensus 243 ~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~i~ 322 (675)
T 3d2f_A 243 EHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPVT 322 (675)
T ss_dssp HHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHHHH
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988888999999999999999999999888889999888888999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHHHHHHHHcCCCCccccceEEEeeec
Q 006381 325 KCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTP 404 (647)
Q Consensus 325 ~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~~~~~~~~~~~~~~~~d~~~ 404 (647)
++|+++++++.+|+.|+||||+||+|+|++.|++.| +.++..+.||++|||+|||++|+.+++. ++++++.+.|++|
T Consensus 323 ~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAa~~a~~ls~~--~~v~~~~l~Dv~p 399 (675)
T 3d2f_A 323 KALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAF-GKPLSTTLNQDEAIAKGAAFICAIHSPT--LRVRPFKFEDIHP 399 (675)
T ss_dssp HHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHH-TSCEECCSCTTTHHHHHHHHHHHHTCSS--CCCCCCEEEEEEC
T ss_pred HHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhc-CCCccccCCcchHHHHHHHHHHHHhCCC--CcccceEEEeeee
Confidence 999999999899999999999999999999999999 6788889999999999999999999853 4578899999999
Q ss_pred ccceEEeeCC----EEEEEEeCCCCCCCcceEEeeeccCCCCcEEEEE-eeccccccc-CCccceeEEecCCCCCCCCCC
Q 006381 405 LSLGLETAGG----VMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQV-YEGERTRTR-DNNLLGKFELSGIPPAPRGVP 478 (647)
Q Consensus 405 ~~~gi~~~~~----~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i-~~g~~~~~~-~~~~lg~~~l~~i~~~~~g~~ 478 (647)
+|||+++.++ .+.+||+||++||++++.+|++..++ .+.+ |+|++..+. +|..||+|.|.|+||.+.|.+
T Consensus 400 ~slgi~~~~~~~~~~~~~li~rnt~iP~~k~~~f~~~~~~----~~~~~~~ge~~~~~~~n~~lg~f~l~gi~~~~~g~~ 475 (675)
T 3d2f_A 400 YSVSYSWDKQVEDEDHMEVFPAGSSFPSTKLITLNRTGDF----SMAASYTDITQLPPNTPEQIANWEITGVQLPEGQDS 475 (675)
T ss_dssp SCEEEEECCTTCSCSEEEEECTTEEESEEEEEEEEESSCE----EEEEEESCGGGSCTTCCSEEEEEEEECCCCCSSCSC
T ss_pred cceEeeecCCCCCcceEEEEcCCCCCCcccceeeeecCCc----eEEEEEcCCcccccccCceeeEEEecCcCCCCCCCc
Confidence 9999999876 49999999999999999999987654 3444 779988887 999999999999999999975
Q ss_pred -eeEEEEEEcCCceEEEEEe----------eccCCcceeEEEecCCCCCCHHHHHHHHHHHHhhhhchHHHHHHHHHHHH
Q 006381 479 -QITVCFDIDANGILNVSAE----------DKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNA 547 (647)
Q Consensus 479 -~i~v~~~~d~~g~l~v~~~----------~~~~~~~~~~~~~~~~~~ls~~e~~~~~~~~~~~~~~d~~~~~~~~a~n~ 547 (647)
+|+|+|++|.||+|+|++. ++.+|++.+++|++...+||++++++++++++++..+|+..+++.++||+
T Consensus 476 ~~i~v~f~id~~Gil~V~a~~~~~~~~~~~~~~t~~~~~i~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~~~n~ 555 (675)
T 3d2f_A 476 VPVKLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDLTIVAHTFGLDAKKLNELIEKENEMLAQDKLVAETEDRKNT 555 (675)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEECC------CCCCEEEECEEEEECSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEEcCCCcEEEEEEEEeecccccccccCcceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 9999999999999999995 68889999999998766899999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccchhhcCCCCHHHHHHHHHHHHHHHHHHhcC-CccCHHHHHHHHHHHHHHHHHHHHHHhccc
Q 006381 548 LENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSN-QLAEADEFEDKMKELESICNPIIAKMYQGA 620 (647)
Q Consensus 548 lE~~i~~~r~~l~~~~~~~~~~~~~~~~i~~~l~~~~~wl~~~-~~~~~~~~~~k~~~l~~~~~~i~~r~~e~~ 620 (647)
||+|+|++|+.|++ .+..++++++++++...++++++||+++ .+++.++|++++++|+++++||..|++|..
T Consensus 556 le~~i~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~~~~~l~~~~~~i~~r~~e~~ 628 (675)
T 3d2f_A 556 LEEYIYTLRGKLEE-EYAPFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLAKE 628 (675)
T ss_dssp HHHHHHHHHHHHTT-TTGGGSCHHHHHHHHHHHHHHHHHTTTGGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HHHhhCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999975 4888999999999999999999999876 468999999999999999999999998854
No 3
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=4.3e-103 Score=878.58 Aligned_cols=593 Identities=51% Similarity=0.809 Sum_probs=557.6
Q ss_pred CEEEEecCccceEEEEEECCeeEEEecCCCCcccceEEEEc-CCceEecHHHHHHHhhCcCchHHhhHHhhCCCCCChhh
Q 006381 8 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT-DSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATV 86 (647)
Q Consensus 8 ~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~-~~~~~~G~~A~~~~~~~p~~~~~~~k~~lg~~~~~~~~ 86 (647)
.+||||||||||+||++.+|.++++.|+.|++++||+|+|. +++++||..|+.+...+|.++++++||+||+.++++.+
T Consensus 3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~v 82 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (605)
T ss_dssp -CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTTH
T ss_pred CEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHHH
Confidence 58999999999999999999999999999999999999995 46899999999999999999999999999999999999
Q ss_pred hhcccCCCeEEEecCCCcceEEEEEcCceeEEeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHH
Q 006381 87 QSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAG 166 (647)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~~~~~qr~~l~~Aa 166 (647)
+...+.+||+++.+.++.+.+.+ .+ ..++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++|+
T Consensus 83 ~~~~~~~p~~~~~~~~g~~~i~~--~g--~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A~ 158 (605)
T 2kho_A 83 QRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158 (605)
T ss_dssp HHHHHHCSSCEEECTTSBEEEEE--TT--EEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEECCCCceEEEE--CC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHHH
Confidence 88888899998877777666655 33 579999999999999999999999999999999999999999999999999
Q ss_pred HHcCCceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEEEEe----CCeEEEEEeeCCCCCChHHHHHH
Q 006381 167 VIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNR 242 (647)
Q Consensus 167 ~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~----~~~~~v~~~~~~~~lGG~~~d~~ 242 (647)
+.|||+++++++||+|||++|++.... .+.++||||+||||||+|++++. ++.++++++.++.++||.+||+.
T Consensus 159 ~~AGl~v~~li~EP~AAAlay~l~~~~---~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~ 235 (605)
T 2kho_A 159 RIAGLEVKRIINEPTAAALAYGLDKGT---GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSR 235 (605)
T ss_dssp HTTTCEEEEEEEHHHHHHHHTTTTSSS---SEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHH
T ss_pred HHcCCceEEEecCHHHHHHHhhhcccC---CCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHH
Confidence 999999999999999999999886542 47899999999999999999998 78999999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCCcEEEEEccccCC----ceeEEeecHHHHHHHHHHHHHH
Q 006381 243 MVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEG----IDFYSPITRARFEELNMDLFRK 318 (647)
Q Consensus 243 l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~~----~d~~~~itr~~fe~~~~~~~~~ 318 (647)
|++|+.++|+++++.++..+++.+.+|+.+||++|+.||......+.++.+.++ .++.+.|||++|++++.|++++
T Consensus 236 l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~ 315 (605)
T 2kho_A 236 LINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNR 315 (605)
T ss_dssp HHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTGG
T ss_pred HHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHHH
Confidence 999999999999998888899999999999999999999998888888766542 5677899999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHHHHHHHHcCCCCccccceE
Q 006381 319 CMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLL 398 (647)
Q Consensus 319 ~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~~~~~~~~~~~~~~ 398 (647)
+..+|+++|+++++...+|+.|+||||+|++|+|++.|++.| +.++....||++|||+|||++|+.+++. ++++.
T Consensus 316 i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f-g~~~~~~~npd~aVA~GAa~~a~~l~~~----~~~~~ 390 (605)
T 2kho_A 316 SIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVL 390 (605)
T ss_dssp GTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHHTTTTTS----CCCCC
T ss_pred HHHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhc-CCCcCcCCCcchHHHHHHHHHHHHhcCC----ccCce
Confidence 999999999999999899999999999999999999999999 6788899999999999999999988764 46788
Q ss_pred EEeeecccceEEeeCCEEEEEEeCCCCCCCcceEEeeeccCCCCcEEEEEeecccccccCCccceeEEecCCCCCCCCCC
Q 006381 399 LLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVP 478 (647)
Q Consensus 399 ~~d~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~~~g~~ 478 (647)
+.|++|++||+++.++.|.++|+||++||+++++.|++..|+|+.+.|.+|||++..+.+|..||+|.|.|+||.|+|.+
T Consensus 391 l~dv~p~slgi~~~~g~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~ 470 (605)
T 2kho_A 391 LLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMP 470 (605)
T ss_dssp CSBCCCCCEEEEETTTEEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCSCCTTCS
T ss_pred EEeeeeeeccccccCCceEEEEecccccCccceEEEEecCCCceEEEEEEEeccCcccccCcEEeEEEecCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEcCCceEEEEEeeccCCcceeEEEecCCCCCCHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhh
Q 006381 479 QITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNT 558 (647)
Q Consensus 479 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~ls~~e~~~~~~~~~~~~~~d~~~~~~~~a~n~lE~~i~~~r~~ 558 (647)
+|+|+|++|.||+|+|++.++.||++.+++|++. +.||++|+++++++++++..+|+..+++.+++|+||+|+|++|+.
T Consensus 471 ~i~v~f~id~~gil~v~a~~~~tg~~~~i~i~~~-~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~ 549 (605)
T 2kho_A 471 QIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQ 549 (605)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTCCEEEEEECTT-SSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEcCCCceeEEEEEcCCCceeecccccc-cCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999987 779999999999999999999999999999999999999999999
Q ss_pred ccchhhcCCCCHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHhc
Q 006381 559 VKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 618 (647)
Q Consensus 559 l~~~~~~~~~~~~~~~~i~~~l~~~~~wl~~~~~~~~~~~~~k~~~l~~~~~~i~~r~~e 618 (647)
|++ +..++++++++++.+.++++++||+++ +.++|++++++|++.++||..|+++
T Consensus 550 l~~--~~~~~~~~~~~~i~~~~~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 2kho_A 550 VEE--AGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHH--HGGGSCHHHHHHHHHHHHHHHHHTTSS---CHHHHHHHHHHHHTTCHHHHHHHC-
T ss_pred HHh--hhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 975 788999999999999999999999965 8999999999999999999999875
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=5.4e-98 Score=829.73 Aligned_cols=553 Identities=82% Similarity=1.211 Sum_probs=525.4
Q ss_pred CCCCCCCCEEEEecCccceEEEEEECCeeEEEecCCCCcccceEEEEcCCceEecHHHHHHHhhCcCchHHhhHHhhCCC
Q 006381 1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRR 80 (647)
Q Consensus 1 M~~~~~~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~~lg~~ 80 (647)
|+. +.+||||||||||+||++.+|.++++.|+.|++++||+|+|.+++++||..|+.+...+|.++++++|||||++
T Consensus 1 M~m---~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~ 77 (554)
T 1yuw_A 1 MSK---GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRR 77 (554)
T ss_dssp CCS---CCCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTCC
T ss_pred CCC---CCEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCCC
Confidence 663 56899999999999999999999999999999999999999998999999999999999999999999999999
Q ss_pred CCChhhhhcccCCCeEEEecCCCcceEEEEEcCceeEEeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHH
Q 006381 81 FSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQ 160 (647)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~~~~~qr~ 160 (647)
++++.++...+.+||.++. .++.+.+.+.+.+....++|+++++++|++|++.|+.+++.++.++|||||++|++.||+
T Consensus 78 ~~d~~v~~~~~~~p~~v~~-~~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~ 156 (554)
T 1yuw_A 78 FDDAVVQSDMKHWPFMVVN-DAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQ 156 (554)
T ss_dssp SSCSHHHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHH
T ss_pred CCcHHHHHHhhcCCeEEEe-cCCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHH
Confidence 9999999999999999984 477888888888877899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEEEEeCCeEEEEEeeCCCCCChHHHH
Q 006381 161 ATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD 240 (647)
Q Consensus 161 ~l~~Aa~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d 240 (647)
++++|++.|||+++++++||+|||++|++.... ..+.++||||+||||||+|++++.++.++++++.++..+||++||
T Consensus 157 a~~~A~~~AGl~~~~li~EP~AAAlay~~~~~~--~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d 234 (554)
T 1yuw_A 157 ATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKV--GAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFD 234 (554)
T ss_dssp HHHHHHHTTTCEEEEEEEHHHHHHHHTTCSTTC--SSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHH
T ss_pred HHHHHHHHcCCCeEEEeCcHHHHHHHHHhhccC--CCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHH
Confidence 999999999999999999999999999886543 246899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCCcEEEEEccccCCceeEEeecHHHHHHHHHHHHHHHH
Q 006381 241 NRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSPITRARFEELNMDLFRKCM 320 (647)
Q Consensus 241 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~~~d~~~~itr~~fe~~~~~~~~~~~ 320 (647)
+.|++++.++|.++++.++..+++.+.+|+.+||++|+.||......+.++.+.++.++...|+|++|++++.|+++++.
T Consensus 235 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i~ 314 (554)
T 1yuw_A 235 NRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTL 314 (554)
T ss_dssp HHHHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHHHH
Confidence 99999999999999998888899999999999999999999999999999988888999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHHHHHHHHcCCCCccccceEEE
Q 006381 321 EPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLL 400 (647)
Q Consensus 321 ~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~~~~~~~~~~~~~~~~ 400 (647)
.+|+++|+++++++.+|+.|+||||+|++|+|++.|++.|++.++..+.||++|||+|||++|+.+++...++.+++.+.
T Consensus 315 ~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~ 394 (554)
T 1yuw_A 315 DPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLL 394 (554)
T ss_dssp HHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCC
T ss_pred HHHHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEEE
Confidence 99999999999998899999999999999999999999997788888999999999999999999987544557789999
Q ss_pred eeecccceEEeeCCEEEEEEeCCCCCCCcceEEeeeccCCCCcEEEEEeecccccccCCccceeEEecCCCCCCCCCCee
Q 006381 401 DVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 480 (647)
Q Consensus 401 d~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~~~g~~~i 480 (647)
|++|++||+++.++.+.++|+||+++|.++++.|++..|+|+.+.|.+|||++..+.+|..||+|.|.|+|+.|+|.++|
T Consensus 395 dv~p~slgi~~~~g~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i 474 (554)
T 1yuw_A 395 DVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQI 474 (554)
T ss_dssp CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCCCSTTCCCE
T ss_pred EeeeeEEEEEecCceEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCccccccCcEEEEEEEeCCCCCcccccEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEcCCceEEEEEeeccCCcceeEEEecCCCCCCHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhhc
Q 006381 481 TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTV 559 (647)
Q Consensus 481 ~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~ls~~e~~~~~~~~~~~~~~d~~~~~~~~a~n~lE~~i~~~r~~l 559 (647)
+|+|++|.||+|+|++.++.+|++.+++|+++.+.||++|+++++++++++..+|+..+++.++||+||+|+|.+|+.|
T Consensus 475 ~v~f~id~~gil~v~a~~~~tg~~~~~~i~~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l 553 (554)
T 1yuw_A 475 EVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATV 553 (554)
T ss_dssp EEEEEECTTCCEEEEEEETTTCCEEEEEECCCSSCSCHHHHHHHHHHHHHTTTHHHHHTTSSCSCEECSSCCSCSCCCC
T ss_pred EEEEEEccCceEEEEEEeccCCCceeEEEecCCCCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999998878899999999999999999999999999999999999999999876
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=4.6e-87 Score=736.51 Aligned_cols=503 Identities=54% Similarity=0.864 Sum_probs=467.0
Q ss_pred CEEEEecCccceEEEEEECCeeEEEecCCCCcccceEEEEcCCceEecHHHHHHHhhCcCchHHhhHHhhCCCCCChhhh
Q 006381 8 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQ 87 (647)
Q Consensus 8 ~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~~lg~~~~~~~~~ 87 (647)
.+||||||||||+||++.+|.+++++|+.|++++||+|+|.+++++||..|+.+...+| ++++++||++|+++.
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~----- 76 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK----- 76 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEESSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC-----
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEECCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE-----
Confidence 59999999999999999999999999999999999999998888999999999999999 999999999998432
Q ss_pred hcccCCCeEEEecCCCcceEEEEEcCceeEEeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHHH
Q 006381 88 SDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGV 167 (647)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~~~~~qr~~l~~Aa~ 167 (647)
+ ...+ ..++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++|++
T Consensus 77 ---------~------------~~~g--~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~~ 133 (509)
T 2v7y_A 77 ---------V------------EIEG--KQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGR 133 (509)
T ss_dssp ---------E------------EETT--EEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred ---------E------------EECC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 1 1122 3688999999999999999999999999999999999999999999999999
Q ss_pred HcCCceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEEEEeCCeEEEEEeeCCCCCChHHHHHHHHHHH
Q 006381 168 IAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHF 247 (647)
Q Consensus 168 ~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l 247 (647)
.||++++++++||+|||++|++... .+.++||||+||||||++++++.++.++++++.++..+||.+||+.|++++
T Consensus 134 ~AGl~~~~li~Ep~AAAlay~~~~~----~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l 209 (509)
T 2v7y_A 134 IAGLEVERIINEPTAAALAYGLDKE----EDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYL 209 (509)
T ss_dssp HTTCEEEEEEEHHHHHHHHTTGGGS----CSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHH
T ss_pred HcCCCeEEEecCHHHHHHHHhhccC----CCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHH
Confidence 9999999999999999999988653 478999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCCcEEEEEccccC---C-ceeEEeecHHHHHHHHHHHHHHHHHHH
Q 006381 248 VQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYE---G-IDFYSPITRARFEELNMDLFRKCMEPV 323 (647)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~---~-~d~~~~itr~~fe~~~~~~~~~~~~~i 323 (647)
.++|.++++.++..+++.+.+|+.+||++|+.||......+.++.+.+ | .++.+.|+|++|++++.|+++++..+|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i 289 (509)
T 2v7y_A 210 VNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPV 289 (509)
T ss_dssp HHHHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHHH
T ss_pred HHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHHH
Confidence 999999998888888999999999999999999999888888876654 2 467789999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHHHHHHHHcCCCCccccceEEEeee
Q 006381 324 EKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVT 403 (647)
Q Consensus 324 ~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~~~~~~~~~~~~~~~~d~~ 403 (647)
+++|+++++...+|+.|+|+||+|++|+|++.|++.| +.++..+.||++|||+|||++|+.+++. .+++.+.|++
T Consensus 290 ~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f-~~~~~~~~~p~~aVa~Gaa~~a~~l~~~----~~~~~~~dv~ 364 (509)
T 2v7y_A 290 RQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKREL-GKEPHKGVNPDEVVAIGAAIQGGVIAGE----VKDVVLLDVT 364 (509)
T ss_dssp HHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHH-SSCCBCCSCTTTHHHHHHHHHHHHHHTC----CCCCCCCCBC
T ss_pred HHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHh-CCCcCcCCCchhhhHhhHHHHHHHhcCC----ccCceEEEee
Confidence 9999999998889999999999999999999999999 5778889999999999999999999864 4678899999
Q ss_pred cccceEEeeCCEEEEEEeCCCCCCCcceEEeeeccCCCCcEEEEEeecccccccCCccceeEEecCCCCCCCCCCeeEEE
Q 006381 404 PLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVC 483 (647)
Q Consensus 404 ~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~ 483 (647)
|++||+++.++.+.++|+||+++|.+++..|++..|+|+.+.|.+|+|++..+.+|..||+|.|.++|+.|+|.++|+|+
T Consensus 365 p~slgi~~~~~~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~ 444 (509)
T 2v7y_A 365 PLSLGIETMGGVFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQIEVT 444 (509)
T ss_dssp SSEEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEESSSBGGGSEEEEEEEEECCCCCCTTCSCEEEE
T ss_pred ccccceeecCCceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEecCccccccCcEEEEEEEeCCCCCCCcccEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCceEEEEEeeccCCcceeEEEecCCCCCCHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHH
Q 006381 484 FDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALE 549 (647)
Q Consensus 484 ~~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~ls~~e~~~~~~~~~~~~~~d~~~~~~~~a~n~lE 549 (647)
|++|.||+|+|++.++.+|++.+++|+++ ..||++|+++++++++++..+|+..+++.++||+||
T Consensus 445 f~id~~gil~v~a~~~~~g~~~~~~i~~~-~~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~e 509 (509)
T 2v7y_A 445 FDIDANGIVHVRAKDLGTNKEQSITIKSS-SGLSEEEIQRMIKEAEENAEADRKRKEAAELRNEAD 509 (509)
T ss_dssp EEECTTSCEEEEEEETTTCCEEEEEECSS-CSCCSHHHHHHHHHHHHSCGGGGGGGGCCCC-----
T ss_pred EEEcCCceEEEEEEEcCCCcEEEEEEEec-CCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHhhcC
Confidence 99999999999999999999999999987 679999999999999999999999999999999986
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=8e-66 Score=553.97 Aligned_cols=382 Identities=81% Similarity=1.210 Sum_probs=361.7
Q ss_pred CCCEEEEecCccceEEEEEECCeeEEEecCCCCcccceEEEEcCCceEecHHHHHHHhhCcCchHHhhHHhhCCCCCChh
Q 006381 6 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDAT 85 (647)
Q Consensus 6 ~~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~~lg~~~~~~~ 85 (647)
+..+||||||||||+||++.+|.++++.|+.|++++||+|+|.++++++|..|+.+...+|.++++.+||++|++++++.
T Consensus 22 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~~ 101 (404)
T 3i33_A 22 SMPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDAT 101 (404)
T ss_dssp -CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSSCEEETHHHHHTTTTCSTTEECCGGGTTTCCTTSHH
T ss_pred cCCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCCCEEecHHHHHhhHhChhhhHHHHHHHhCCCCCcHH
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccCCCeEEEecCCCcceEEEEEcCceeEEeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHH
Q 006381 86 VQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDA 165 (647)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~~~~~qr~~l~~A 165 (647)
++...+.+||.+.. .++.+.+.+.+.+....++|+++++++|++|++.++.+++..+.++|||||++|++.||+++++|
T Consensus 102 ~~~~~~~~p~~~~~-~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a 180 (404)
T 3i33_A 102 VQSDMKHWPFRVVS-EGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDA 180 (404)
T ss_dssp HHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHhhCCceEEc-cCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHHHH
Confidence 99999999999885 67788888888887789999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEEEEeCCeEEEEEeeCCCCCChHHHHHHHHH
Q 006381 166 GVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVN 245 (647)
Q Consensus 166 a~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~ 245 (647)
++.|||+++.+++||+|||++|+.........+.++||||+||||+|++++++.++.++++++.++..+||.+||+.|++
T Consensus 181 ~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~ 260 (404)
T 3i33_A 181 GTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 260 (404)
T ss_dssp HHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHH
T ss_pred HHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHHHH
Confidence 99999999999999999999998776533235789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCCcEEEEEccccCCceeEEeecHHHHHHHHHHHHHHHHHHHHH
Q 006381 246 HFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSPITRARFEELNMDLFRKCMEPVEK 325 (647)
Q Consensus 246 ~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~~~d~~~~itr~~fe~~~~~~~~~~~~~i~~ 325 (647)
++.++|.++++.++..+++.+.+|+.+||++|+.||......+.++.+.++.++...|+|++|++++.++++++.++|.+
T Consensus 261 ~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~~i~~ 340 (404)
T 3i33_A 261 HLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEK 340 (404)
T ss_dssp HHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHH
T ss_pred HHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999899999999999999999999999999999998889999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHHHHHHHHcC
Q 006381 326 CLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSG 388 (647)
Q Consensus 326 ~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~~~~ 388 (647)
+|+++++...+|+.|+|+||+|++|+|++.|++.|++.++..+.||+++||+|||++|+.+++
T Consensus 341 ~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 341 ALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 999999988899999999999999999999999998788889999999999999999999874
No 7
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=1.3e-64 Score=543.13 Aligned_cols=377 Identities=65% Similarity=1.026 Sum_probs=360.0
Q ss_pred CCEEEEecCccceEEEEEECCeeEEEecCCCCcccceEEEEcCCceEecHHHHHHHhhCcCchHHhhHHhhCCCCCChhh
Q 006381 7 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATV 86 (647)
Q Consensus 7 ~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~~lg~~~~~~~~ 86 (647)
..+||||||||||+||++.+|.++++.|+.|++++||+|+|.++++++|..|+.....+|.++++.+|+++|++++++.+
T Consensus 18 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 97 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSV 97 (394)
T ss_dssp CSCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECSSCEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCHHH
T ss_pred CCEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeCCcEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCeEEEecCCCcceEEEEEcCceeEEeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHH
Q 006381 87 QSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAG 166 (647)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~~~~~qr~~l~~Aa 166 (647)
+...+.+||.+. +.++.+.+.+.+.+....++|+++++++|++|++.++.+++..+.++|||||++|++.||+++++|+
T Consensus 98 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~ 176 (394)
T 3qfu_A 98 QKDIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAG 176 (394)
T ss_dssp HHHHTTCSSEEE-EETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEE-cCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHHHH
Confidence 999999999988 6778888888888878899999999999999999999999999999999999999999999999999
Q ss_pred HHcCCceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEEEEeCCeEEEEEeeCCCCCChHHHHHHHHHH
Q 006381 167 VIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNH 246 (647)
Q Consensus 167 ~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~ 246 (647)
+.|||+++.+++||+|||++|++.... .+.++||||+||||+|++++++.++.+++++..++..+||.+||+.|.++
T Consensus 177 ~~aGl~~~~li~Ep~Aaa~~~~~~~~~---~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~ 253 (394)
T 3qfu_A 177 TIAGLNVLRIVNEPTAAAIAYGLDKSD---KEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQ 253 (394)
T ss_dssp HHTTCEEEEEEEHHHHHHHHTTTTSCS---SCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHH
T ss_pred HHcCCceEEEecCHHHHHHHHhhccCC---CCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHH
Confidence 999999999999999999999876543 57899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCCcEEEEEccccCCceeEEeecHHHHHHHHHHHHHHHHHHHHHH
Q 006381 247 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSPITRARFEELNMDLFRKCMEPVEKC 326 (647)
Q Consensus 247 l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~~~d~~~~itr~~fe~~~~~~~~~~~~~i~~~ 326 (647)
+.++|.++++.++..+++.+.+|+.+||++|+.||......+.++.+.++.++...++|++|++++.++++++...|.++
T Consensus 254 l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~ 333 (394)
T 3qfu_A 254 LIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKV 333 (394)
T ss_dssp HHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888889999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHHHHHHHHc
Q 006381 327 LRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILS 387 (647)
Q Consensus 327 l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~~~ 387 (647)
|+++++...+|+.|+|+||+|++|+|++.|++.|++.++..+.||+++||+|||++|+.++
T Consensus 334 l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 334 LQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 9999998889999999999999999999999999878898999999999999999999764
No 8
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=5.1e-63 Score=532.69 Aligned_cols=378 Identities=31% Similarity=0.551 Sum_probs=340.9
Q ss_pred CCEEEEecCccceEEEEEECCeeEEEecCCCCcccceEEEEcCCceEecHHHHHHHhhCcCchHHhhHHhhCCCCCChhh
Q 006381 7 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATV 86 (647)
Q Consensus 7 ~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~~lg~~~~~~~~ 86 (647)
+.+||||||||||+||++.+|.++++.|+.|.+++||+|+|.++++++|..|..+...+|.++++++|+++|+.++++.+
T Consensus 13 ~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~~ 92 (409)
T 4gni_A 13 RVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVDP 92 (409)
T ss_dssp CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEETTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCCC
T ss_pred CcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEECCCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchhh
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999887765
Q ss_pred hhcccCCCeEEEecCCCcceEEEEEc----CceeEEeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHH
Q 006381 87 QSDTKLWPFKVIAGAGDKPMIVVTYK----GEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQAT 162 (647)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~~~~~qr~~l 162 (647)
+.... ++.+. ..++...+.+... +....++|+++++++|++|++.++.+++..+.++|||||++|++.||++|
T Consensus 93 ~~~~~--~~~~~-~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~ 169 (409)
T 4gni_A 93 THNHA--SAHPQ-EAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAAL 169 (409)
T ss_dssp GGGTT--SCCCE-EETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHH
T ss_pred hhhcc--cccee-cCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHH
Confidence 54432 33322 3445555555443 35678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEEEEeCCeEEEEEeeCCCCCChHHHHHH
Q 006381 163 KDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNR 242 (647)
Q Consensus 163 ~~Aa~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~ 242 (647)
++|++.|||+++.+++||+|||++|+.... ....+.++||||+||||+|++++++.++.++++++.++..+||.+||+.
T Consensus 170 ~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~-~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~ 248 (409)
T 4gni_A 170 IAAAAAADLEVLQLISEPAAAVLAYDARPE-ATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKV 248 (409)
T ss_dssp HHHHHHTTCEEEEEEEHHHHHHHHTTC-------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHH
T ss_pred HHHHHHcCCCeEEEEcCHHHHHHHHhcccc-cCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHH
Confidence 999999999999999999999999987642 1236789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcc--CCCCCCHHHHHHHHHHHHHHHHHcCCCCcEEEEEccccCCceeEEeecHHHHHHHHHHHHHHHH
Q 006381 243 MVNHFVQEFKRKHK--KDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSPITRARFEELNMDLFRKCM 320 (647)
Q Consensus 243 l~~~l~~~~~~~~~--~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~~~d~~~~itr~~fe~~~~~~~~~~~ 320 (647)
|++++.++|..+++ .+...+++.+.+|+.+||++|+.||......+.++.+.++.++...|||++|+++++|+++++.
T Consensus 249 i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~ 328 (409)
T 4gni_A 249 LIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRYETIARTVFEGFN 328 (409)
T ss_dssp HHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEEeeHHHHHHHHHHHHHHHH
Confidence 99999999999888 7777889999999999999999999999999999988899999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhCCc-cc------cCCCCchhhHHhHHHHHHHHHcC
Q 006381 321 EPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGK-EL------CKSINPDEAVAYGAAVQAAILSG 388 (647)
Q Consensus 321 ~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~-~v------~~~~~p~~ava~GAa~~a~~~~~ 388 (647)
.+|+++|+++++...+|+.|+|+||+|++|+|++.|++.|+.. ++ ....||+++||+|||++|+....
T Consensus 329 ~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~~ 403 (409)
T 4gni_A 329 RLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQE 403 (409)
T ss_dssp HHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhhh
Confidence 9999999999998889999999999999999999999999543 34 57899999999999999998763
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=9.9e-62 Score=518.38 Aligned_cols=371 Identities=52% Similarity=0.837 Sum_probs=338.6
Q ss_pred CEEEEecCccceEEEEEECCeeEEEecCCCCcccceEEEEcC-CceEecHHHHHHHhhCcCchHHhhHHhhCCCCCChhh
Q 006381 8 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTD-SERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATV 86 (647)
Q Consensus 8 ~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~-~~~~~G~~A~~~~~~~p~~~~~~~k~~lg~~~~~~~~ 86 (647)
.+||||||||||+||++++|.++++.|+.|.+++||+|+|.. ++++||..|+.+...+|.++++++|++||+.++++.+
T Consensus 3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 82 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (383)
T ss_dssp CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHHH
T ss_pred cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHHH
Confidence 589999999999999999999999999999999999999964 6789999999999999999999999999999999988
Q ss_pred hhcccCCCeEEEecCCCcceEEEEEcCceeEEeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHH
Q 006381 87 QSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAG 166 (647)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~~~~~qr~~l~~Aa 166 (647)
+...+.+||.+..+.++...+.+ .+ ..++|+++++++|+++++.|+.+++.++.++|||||++|++.||+++++|+
T Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~--~g--~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~ 158 (383)
T 1dkg_D 83 QRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158 (383)
T ss_dssp HHHTTTCSSEEEECSSSBEEEEE--TT--EEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEEcCCCcEEEEE--CC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 88888899998877776665554 33 478999999999999999999999988999999999999999999999999
Q ss_pred HHcCCceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEEEEe----CCeEEEEEeeCCCCCChHHHHHH
Q 006381 167 VIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNR 242 (647)
Q Consensus 167 ~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~----~~~~~v~~~~~~~~lGG~~~d~~ 242 (647)
+.||++++.+++||+|||++|+.... ..+.++||||+||||||+++++.. ++.++++++.++..+||.+||+.
T Consensus 159 ~~aGl~~~~li~Ep~Aaa~~~~~~~~---~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~ 235 (383)
T 1dkg_D 159 RIAGLEVKRIINEPTAAALAYGLDKG---TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSR 235 (383)
T ss_dssp HHTTCEESCCCBHHHHHHHHHTCCC----CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHH
T ss_pred HHcCCceEEEeccHHHHHHHHHhccC---CCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHH
Confidence 99999999999999999999987653 257899999999999999999998 57888998889899999999999
Q ss_pred HHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCCcEEEEEccccC---C-ceeEEeecHHHHHHHHHHHHHH
Q 006381 243 MVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYE---G-IDFYSPITRARFEELNMDLFRK 318 (647)
Q Consensus 243 l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~---~-~d~~~~itr~~fe~~~~~~~~~ 318 (647)
|.+++.++|..+++.++..+++.+.+|+..||++|+.|+......+.++.+.+ | .++.+.|+|++|+++++|++++
T Consensus 236 l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~ 315 (383)
T 1dkg_D 236 LINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNR 315 (383)
T ss_dssp HHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHHH
Confidence 99999999999888888888999999999999999999998888887776543 2 4567799999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHHHHHHHH
Q 006381 319 CMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAIL 386 (647)
Q Consensus 319 ~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~~ 386 (647)
+.+.|.++|+++++...+++.|+|+||+|++|+|++.|++.| +.++..+.||+++||+|||++|+.+
T Consensus 316 i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~l 382 (383)
T 1dkg_D 316 SIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVL 382 (383)
T ss_dssp HHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHh-CCCCCCCcChHHHHHHHHHHHHHhh
Confidence 999999999999988889999999999999999999999999 5778889999999999999998765
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=4.3e-42 Score=360.98 Aligned_cols=311 Identities=24% Similarity=0.344 Sum_probs=238.4
Q ss_pred CCEEEEecCccceEEEEEECCeeEEEecCCCCcccceEEEEcCC--c-eEecHHHHHHHhhCcCchHHhhHHhhCCCCCC
Q 006381 7 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDS--E-RLIGDAAKNQVAMNPINTVFDAKRLIGRRFSD 83 (647)
Q Consensus 7 ~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~--~-~~~G~~A~~~~~~~p~~~~~~~k~~lg~~~~~ 83 (647)
+.+||||||||||++++..++ .++ .+||+|+|..+ + .++|++|+....++|.++..
T Consensus 3 ~~~igIDlGT~~s~v~~~~~~--~~~-------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~------------ 61 (344)
T 1jce_A 3 RKDIGIDLGTANTLVFLRGKG--IVV-------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKA------------ 61 (344)
T ss_dssp -CEEEEEECSSEEEEEETTTE--EEE-------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEE------------
T ss_pred CceEEEEcCcCcEEEEECCCC--EEE-------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEE------------
Confidence 468999999999999875443 232 37999999865 3 37999998776666655421
Q ss_pred hhhhhcccCCCeEEEecCCCcceEEEEEcCceeEEeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHH
Q 006381 84 ATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATK 163 (647)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~~~~~qr~~l~ 163 (647)
..|++ ++ .+ . ....++++++++|++++.. ..++ ...+|||||++|++.||++++
T Consensus 62 --------~~p~~-----~g--~i----~---~~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~~ 115 (344)
T 1jce_A 62 --------IRPMR-----DG--VI----A---DYTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAIL 115 (344)
T ss_dssp --------ECCEE-----TT--EE----S---SHHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHHH
T ss_pred --------EecCC-----CC--ee----C---ChHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHHH
Confidence 01221 00 00 0 0113566777777665542 1233 478999999999999999999
Q ss_pred HHHHHcCCceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEEEEeCCeEEEEEeeCCCCCChHHHHHHH
Q 006381 164 DAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRM 243 (647)
Q Consensus 164 ~Aa~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l 243 (647)
+|++.||++++.+++||+|||++|+.... .+.++||||+||||||+++++.... ...++..+||.+||+.|
T Consensus 116 ~a~~~aG~~~~~li~ep~Aaa~~~~~~~~----~~~~~lVvDiGggttdvsv~~~~~~-----~~~~~~~lGG~~id~~l 186 (344)
T 1jce_A 116 DAGLEAGASKVFLIEEPMAAAIGSNLNVE----EPSGNMVVDIGGGTTEVAVISLGSI-----VTWESIRIAGDEMDEAI 186 (344)
T ss_dssp HHHHHTTCSEEEEEEHHHHHHHHTTCCTT----SSSCEEEEEECSSCEEEEEEETTEE-----EEEEEESCSHHHHHHHH
T ss_pred HHHHHcCCCeEeccCCHHHHHHhcCCCCC----CCceEEEEEeCCCeEEEEEEEcCCE-----EeeCCCCccChhHHHHH
Confidence 99999999999999999999999986543 4678999999999999999987531 23456789999999999
Q ss_pred HHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCCc------EEEEEc--cccCCceeEEeecHHHHHHHHHHH
Q 006381 244 VNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQ------TTIEID--SLYEGIDFYSPITRARFEELNMDL 315 (647)
Q Consensus 244 ~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~------~~~~i~--~~~~~~d~~~~itr~~fe~~~~~~ 315 (647)
.+++.+++. .++. ...||++|+.|+.... ..+.++ .+.++.++.+.|+|++|+++++|.
T Consensus 187 ~~~l~~~~~----~~~~---------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~ 253 (344)
T 1jce_A 187 VQYVRETYR----VAIG---------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALRSV 253 (344)
T ss_dssp HHHHHHHHC----EECC---------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHHHHHHHTHHH
T ss_pred HHHHHHHhC----cccC---------HHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeHHHHHHHHHHH
Confidence 999987653 2221 4689999999987642 234433 344677788999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCC--CCCC-CeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHHHHHHHHc
Q 006381 316 FRKCMEPVEKCLRDAKMD--KSSV-HDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILS 387 (647)
Q Consensus 316 ~~~~~~~i~~~l~~~~~~--~~~i-~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~~~ 387 (647)
++++.+.|.++|++++.. ...+ +.|+|+||+|++|+|++.|++.| +.++..+.||+++||+||+++|..++
T Consensus 254 ~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 254 VVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKET-GISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHH-SSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred HHHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHH-CCCccccCChHHHHHHHHHHHHhChH
Confidence 999999999999987532 1224 68999999999999999999999 56788888999999999999987544
No 11
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=100.00 E-value=3.6e-39 Score=311.07 Aligned_cols=215 Identities=49% Similarity=0.742 Sum_probs=206.2
Q ss_pred EEEeeecccceEEeeCCEEEEEEeCCCCCCCcceEEeeeccCCCCcEEEEEeecccccccCCccceeEEecCCCCCCCCC
Q 006381 398 LLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGV 477 (647)
Q Consensus 398 ~~~d~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~~~g~ 477 (647)
++.|++|+|+|+++.+|.|.+|||||++||++++++|++..|+|+.+.|.||||++..+.+|..||+|.|.|+||.|+|.
T Consensus 2 ~l~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~gipp~p~G~ 81 (219)
T 4e81_A 2 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGM 81 (219)
T ss_dssp CCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTC
T ss_pred eEEEecCcEEEEEEeCCEEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEEEEeCCCCCCCCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEEEEcCCceEEEEEeeccCCcceeEEEecCCCCCCHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHh
Q 006381 478 PQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRN 557 (647)
Q Consensus 478 ~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~ls~~e~~~~~~~~~~~~~~d~~~~~~~~a~n~lE~~i~~~r~ 557 (647)
++|+|+|++|.||+|+|++.++.||++.+++|++. ..||++||++++++++++..+|++.+++.++||.||+|+|.+|+
T Consensus 82 ~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~-~~Ls~eeI~~m~~~a~~~~~eD~~~r~~~e~kn~le~~i~~~~~ 160 (219)
T 4e81_A 82 PQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRK 160 (219)
T ss_dssp SCEEEEEEECTTCCEEEEEEETTTCCEEEEEECTT-CSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEeCCCCCEeeeeeccccCccceEeeecc-ccccHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999886 45999999999999999999999999999999999999999999
Q ss_pred hccchhhcCCCCHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHhc
Q 006381 558 TVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 618 (647)
Q Consensus 558 ~l~~~~~~~~~~~~~~~~i~~~l~~~~~wl~~~~~~~~~~~~~k~~~l~~~~~~i~~r~~e 618 (647)
.|++ +..++++++++.|...++++++||+++ +.++|++++++|++.+.||..|+++
T Consensus 161 ~l~~--~~~~l~~~~k~~i~~~l~~~~~~L~~~---~~~~i~~~~~~L~~~~~~i~~~~~~ 216 (219)
T 4e81_A 161 QVEE--AGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 216 (219)
T ss_dssp HHHH--HGGGSCHHHHHHHHHHHHHHHHHHHSS---CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHH--hhhhCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9975 778899999999999999999999987 8999999999999999999999887
No 12
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=100.00 E-value=1.2e-36 Score=296.69 Aligned_cols=215 Identities=32% Similarity=0.542 Sum_probs=204.6
Q ss_pred EeeecccceEEeeCCEEEEEEeCCCCCCCcceEEeeeccCCCCcEEEEEeecccccccCCccceeEEecCCCCCCCCCCe
Q 006381 400 LDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQ 479 (647)
Q Consensus 400 ~d~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~~~g~~~ 479 (647)
.|++|+++|+++.+|.|.+|||||++||++++.+|++..|+|+.+.|.+|||++..+.+|..||+|.|.|+||.|+|.++
T Consensus 1 ~Dv~p~slGie~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~Lg~f~l~gi~~~p~G~~~ 80 (227)
T 1u00_A 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAH 80 (227)
T ss_dssp CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSSBGGGSEEEEEEEECCCCCCSTTCSC
T ss_pred CCcccceEEEEEeCCEEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCCccCCCCCEEEEEEEeCCCCCCCCceE
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEcCCceEEEEEeeccCCcceeEEEecCCCCCCHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhhc
Q 006381 480 ITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTV 559 (647)
Q Consensus 480 i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~ls~~e~~~~~~~~~~~~~~d~~~~~~~~a~n~lE~~i~~~r~~l 559 (647)
|+|+|++|.||+|+|++.++.+|++..++|+.. ..||+++++++.++++++..+|+..+++.+++|.||+|+|.+|+.|
T Consensus 81 I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~-~~Ls~eei~~~~~~~~~~~~~D~~~~e~~e~kn~le~~i~~~~~~l 159 (227)
T 1u00_A 81 IRVTFQVDADGLLSVTAMEKSTGVEASIQVKPS-YGLTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGAL 159 (227)
T ss_dssp EEEEEEECTTCCEEEEEEETTTCCEEEEEECCC-SCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCcEEEEeecccccccceEEEEec-cCCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999887 4599999999999999999999999999999999999999999999
Q ss_pred cchhhcCCCCHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHhccc
Q 006381 560 KDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQGA 620 (647)
Q Consensus 560 ~~~~~~~~~~~~~~~~i~~~l~~~~~wl~~~~~~~~~~~~~k~~~l~~~~~~i~~r~~e~~ 620 (647)
.+ +..++++++++.+...++++++||+++ +.++|++++++|+++++||..|++.++
T Consensus 160 ~~--~~~~~~~~~k~~i~~~l~~~~~wl~~~---d~~~~~~~~~~L~~~~~~i~~r~~~~~ 215 (227)
T 1u00_A 160 AA--DAALLSAAERQVIDDAAAHLSEVAQGD---DVDAIEQAIKNVDKQTQDFAARRMDQS 215 (227)
T ss_dssp HH--HGGGSCHHHHHHHHHHHHHHHHHTTSS---CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Hh--hhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 75 678899999999999999999999965 789999999999999999999887543
No 13
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.9e-32 Score=253.84 Aligned_cols=166 Identities=58% Similarity=0.835 Sum_probs=155.1
Q ss_pred ccceEEEeeecccceEEeeCCEEEEEEeCCCCCCCcceEEeeeccCCCCcEEEEEeecccccccCCccceeEEecCCCCC
Q 006381 394 VQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPA 473 (647)
Q Consensus 394 ~~~~~~~d~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~ 473 (647)
...+.+.|++|+|+|+++.+|.|.+|||||++||++++++|++..|+|+.+.|.+|||++..+.+|..||+|.|.|+||+
T Consensus 17 ~~~f~l~DV~P~slGie~~gg~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~gipp~ 96 (182)
T 3n8e_A 17 NLYFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPA 96 (182)
T ss_dssp -------CBCSSCEEEECTTSBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCC
T ss_pred CCCEEEEEecCCEEEEEEeCCEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCccccccCceEEEEEEcCCCCC
Confidence 34688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeeEEEEEEcCCceEEEEEeeccCCcceeEEEecCCCCCCHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHH
Q 006381 474 PRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAY 553 (647)
Q Consensus 474 ~~g~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~ls~~e~~~~~~~~~~~~~~d~~~~~~~~a~n~lE~~i~ 553 (647)
|+|.++|+|+|++|.||+|+|++.++.||++.+++|++. +.||++|+++++++++++..+|++.+++.++||.||+|+|
T Consensus 97 p~G~~~IeVtf~iD~nGiL~VsA~d~~tg~~~~i~I~~~-~~Ls~eei~~mi~~a~~~~~eD~~~~~~~e~kn~le~~iy 175 (182)
T 3n8e_A 97 PRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSS-GGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIH 175 (182)
T ss_dssp CTTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEESCC-CCCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeeEEEEEEEecCCEEEEEEEEcCCCCEeeEEEecC-ccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999987 8899999999999999999999999999999999999999
Q ss_pred HHHhhcc
Q 006381 554 NMRNTVK 560 (647)
Q Consensus 554 ~~r~~l~ 560 (647)
.+|+.|+
T Consensus 176 ~~~~~l~ 182 (182)
T 3n8e_A 176 DTETKME 182 (182)
T ss_dssp CCSCCCC
T ss_pred HHHHhhC
Confidence 9998763
No 14
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.96 E-value=8.1e-30 Score=231.48 Aligned_cols=151 Identities=68% Similarity=1.028 Sum_probs=146.1
Q ss_pred EEeeecccceEEeeCCEEEEEEeCCCCCCCcceEEeeeccCCCCcEEEEEeecccccccCCccceeEEecCCCCCCCCCC
Q 006381 399 LLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVP 478 (647)
Q Consensus 399 ~~d~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~~~g~~ 478 (647)
+.|++|+|+|+++.+|.|.+|||||++||++++++|++..|+|+.+.|.+|||++..+.+|..||+|.|.|+||.|+|.+
T Consensus 2 ~~Dv~p~slGi~~~gg~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ccceeccEEEEEEcCCEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEcCCceEEEEEeeccCCcceeEEEecCCCCCCHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHH
Q 006381 479 QITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALE 549 (647)
Q Consensus 479 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~ls~~e~~~~~~~~~~~~~~d~~~~~~~~a~n~lE 549 (647)
+|+|+|++|.||+|+|++.++.+|++.+++|.++.+.||++|++++++++++|..+|+..+++.++||.||
T Consensus 82 ~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~~ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3h0x_A 82 QIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEEIDRMVEEAEKFASEDASIKAKVESRNKLE 152 (152)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECCTTCCCHHHHHHHHHHHHHTHHHHHHHHHHHHCSCCCC
T ss_pred eEEEEEEEcCCCEEEEEEEEcCCCcEeEEEEecCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999988889999999999999999999999999999999875
No 15
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.96 E-value=5.1e-30 Score=232.29 Aligned_cols=151 Identities=68% Similarity=1.064 Sum_probs=141.5
Q ss_pred EEeeecccceEEeeCCEEEEEEeCCCCCCCcceEEeeeccCCCCcEEEEEeecccccccCCccceeEEecCCCCCCCCCC
Q 006381 399 LLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVP 478 (647)
Q Consensus 399 ~~d~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~~~g~~ 478 (647)
+.|++|+|+|+++.+|.|.+|||||++||++++++|++..|+|+.+.|.+|||++..+.+|..||+|.|.|+||.|+|.+
T Consensus 2 ~~Dv~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVP 81 (152)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCC
T ss_pred ceeeecceEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCccccccCceeEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEcCCceEEEEEeeccCCcceeEEEecCCCCCCHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHH
Q 006381 479 QITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALE 549 (647)
Q Consensus 479 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~ls~~e~~~~~~~~~~~~~~d~~~~~~~~a~n~lE 549 (647)
+|+|+|++|.||+|+|++.++.||++.+++|+++.+.||++|+++++++++++..+|++.+++.++||.||
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3dob_A 82 QIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLE 152 (152)
T ss_dssp CEEEEEEECTTCCEEEEEEETTTCCEEEEEECCC----CHHHHHHHHHHHHHTHHHHHHHHHTCCCCSEEC
T ss_pred eEEEEEEeCCCCeEEEEEEEcCCCCEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999988889999999999999999999999999999998765
No 16
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.96 E-value=9.1e-30 Score=230.38 Aligned_cols=150 Identities=61% Similarity=0.911 Sum_probs=142.8
Q ss_pred EEeeecccceEEeeCCEEEEEEeCCCCCCCcceEEeeeccCCCCcEEEEEeecccccccCCccceeEEecCCCCCCCCCC
Q 006381 399 LLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVP 478 (647)
Q Consensus 399 ~~d~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~~~g~~ 478 (647)
+.|++|+|+|+++.+|.|.+|||||++||++++++|++..|+|+.+.|.+|||++..+.+|..||+|.|.|+||.|+|.+
T Consensus 2 ~~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVP 81 (151)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCS
T ss_pred cceeeeeEEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcCCcccccCcEEEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEcCCceEEEEEeeccCCcceeEEEecCCCCCCHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHH
Q 006381 479 QITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALE 549 (647)
Q Consensus 479 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~ls~~e~~~~~~~~~~~~~~d~~~~~~~~a~n~lE 549 (647)
+|+|+|++|.||+|+|++.++.||++.+++|+++ +.||++|+++++++++++..+|++.+++.++||.||
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~-~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~~e 151 (151)
T 3dqg_A 82 QVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSS-GGLSKDQIENMIKEAEKNAAEDAKRKELVEVINQAE 151 (151)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECS-SSSCHHHHHHHHHHHHHHHHHHTTCCCEEECBCCCC
T ss_pred EEEEEEEeccCcEEEEEEEEccCCCEeEEEEecC-CCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999987 789999999999999999999999888888888764
No 17
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.96 E-value=1.6e-28 Score=260.96 Aligned_cols=300 Identities=17% Similarity=0.199 Sum_probs=197.6
Q ss_pred CCEEEEecCccceEEEEEECCeeEEEecCCCCcccceEEEEcCCceEecHHHHHHHhhCcCchHHhhHHhhCCCCCChhh
Q 006381 7 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATV 86 (647)
Q Consensus 7 ~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~~lg~~~~~~~~ 86 (647)
..++|||+|||+++++++++|.+.+. ..|...+|+.+ .+.....++..+...+|+++++.
T Consensus 13 ~~~vgiDiGt~~i~~~~~~~~~~~i~--~~g~~~~ps~~------------~~~g~i~d~~~~~~~ik~~~~~~------ 72 (377)
T 2ych_A 13 VEALGLEIGASALKLVEVSGNPPALK--ALASRPTPPGL------------LMEGMVAEPAALAQEIKELLLEA------ 72 (377)
T ss_dssp CCCEEEEECSSEEEEEEEETTTTEEE--EEEEEECCTTS------------EETTEESCHHHHHHHHHHHHHHH------
T ss_pred CceEEEEeCCCeEEEEEEeCCceEEE--EEEeEECCCCc------------ccCCCcCCHHHHHHHHHHHHHHc------
Confidence 57899999999999999887765542 33555667632 12334457888888999988651
Q ss_pred hhcccCCCeEEEecCCCcceEEEEEcCceeEEeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHH--------
Q 006381 87 QSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQ-------- 158 (647)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~~~~~q-------- 158 (647)
..+.. .+...-.+.......... ..++++++... ++..++.+++.++.+++|++|. .+.+
T Consensus 73 --~~~~~--~v~~~i~~~~~~~~~~~~--~~v~~~el~~~----i~~ea~~~~~~~~~~~vid~~~--~~~~~~~~~~~~ 140 (377)
T 2ych_A 73 --RTRKR--YVVTALSNLAVILRPIQV--PKMPLKEMEEA----VRWEAERYIPFPIDEVVLDFAP--LTPLSEVQEGEQ 140 (377)
T ss_dssp --TCCCC--EEEEEECGGGCEEEEEEE--ECCCHHHHHHH----HHHHHGGGCSSCC-CEEEEEEE--SSCGGGSCTTSE
T ss_pred --CCCcc--eEEEEecCCcEEEEEEEC--CCCCHHHHHHH----HHHHHhhcCCCChhHceEEEEE--eCCCCCCCCcce
Confidence 00000 111111122222211111 34677776543 3446777889999999999983 2222
Q ss_pred ------------HHHHHHHHHHcCCceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEEEEeCCeEEEE
Q 006381 159 ------------RQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVK 226 (647)
Q Consensus 159 ------------r~~l~~Aa~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~ 226 (647)
.+.+++|++.|||++..++.||+|||.+|+..... ..+..++|+|+||||||+++++. +.+
T Consensus 141 ~~v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~--~~~~~~~vvDiGggttdi~i~~~--g~~--- 213 (377)
T 2ych_A 141 VQVMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAE--EPDRVFLVLDIGAESTSLVLLRG--DKP--- 213 (377)
T ss_dssp EEEEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHT--STTCEEEEEEECSSCEEEEEEET--TEE---
T ss_pred eEEEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhccc--ccCCeEEEEEECCCcEEEEEEEC--CEE---
Confidence 38899999999999999999999999998654322 24568999999999999999963 333
Q ss_pred EeeCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCCcEEEEEccccCCceeEEeecHH
Q 006381 227 ATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSPITRA 306 (647)
Q Consensus 227 ~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~~~d~~~~itr~ 306 (647)
...++..+||.+||+.|++.+ +.+ +..||++|+.++.........+...+-......++|+
T Consensus 214 ~~~~~~~~GG~~i~~~i~~~~--------~~~-----------~~~aE~~K~~~~~~~~~~~~~~~~i~~~~~~~~i~~~ 274 (377)
T 2ych_A 214 LAVRVLTLSGKDFTEAIARSF--------NLD-----------LLAAEEVKRTYGMATLPTEDEELLLDFDAERERYSPG 274 (377)
T ss_dssp EEEEEESCSHHHHHHHHHHHT--------TCC-----------HHHHHHHHHHTC-------------------------
T ss_pred EEEEeeechHHHHHHHHHHHh--------CCC-----------HHHHHHHHhhcccccccccccccccccccccccCCHH
Confidence 234567899999999998732 221 4689999999876432211100001111234578999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHc--CCCCCCCCeEEEEcCCCCcHHHHHHHHhhhCCccc
Q 006381 307 RFEELNMDLFRKCMEPVEKCLRDA--KMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKEL 365 (647)
Q Consensus 307 ~fe~~~~~~~~~~~~~i~~~l~~~--~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v 365 (647)
+|++++.+.++++...|++.|+.. +.....++.|+|+||+|++|.+++.+++.| +.++
T Consensus 275 ~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l-~~~v 334 (377)
T 2ych_A 275 RIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTL-GVNL 334 (377)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHH-TSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHh-CCCe
Confidence 999999999999999999999853 455667999999999999999999999999 4444
No 18
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.95 E-value=2.5e-28 Score=255.19 Aligned_cols=231 Identities=17% Similarity=0.150 Sum_probs=167.6
Q ss_pred EeHHHHHHHHHHHHHHHHHHHhCCCCCcEE--EEeCCCCCHHHHHHHHHHHHHc--------C------CceeEecChhH
Q 006381 118 FAAEEISSMVLIKMREIAEAYLGSTVKNAV--VTVPAYFNDSQRQATKDAGVIA--------G------LNVMRIINEPT 181 (647)
Q Consensus 118 ~~~~ev~a~~L~~l~~~a~~~~~~~~~~~V--iTVPa~~~~~qr~~l~~Aa~~A--------G------l~~~~li~Ep~ 181 (647)
+.++...++++..|+..++...+.. .++| |+||++|++.||+++++|+..+ | +..+.+++||+
T Consensus 95 ~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~ 173 (346)
T 2fsj_A 95 LASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGV 173 (346)
T ss_dssp TTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTH
T ss_pred ccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHH
Confidence 3446677777777776542222223 4699 9999999999999999997765 4 35588999999
Q ss_pred HHHhcccccccccCCCCeeEEEEEeCCCceEEEEEEEeCCeEEEEEeeCCCCCChHHHHHHHHHHHHHHHHhhccCCCCC
Q 006381 182 AAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISG 261 (647)
Q Consensus 182 Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~ 261 (647)
|||++| +..........+++|||+||||||++++++.++. .+....++..+||.+|++.|.+++.+++ +...
T Consensus 174 AAa~~~-l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~-~v~~~s~~~~lGg~~i~~~I~~~i~~~~----g~~~-- 245 (346)
T 2fsj_A 174 GAALYL-LNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDME-PVVELSFSLQIGVGDAISALSRKIAKET----GFVV-- 245 (346)
T ss_dssp HHHHHH-HHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTE-ECGGGCEEESCCHHHHHHHHHHHHHHHH----CCCC--
T ss_pred HHHHHh-hccccccccCCcEEEEECCCCcEEEEEEEecCCE-EEeecCCCcchhHHHHHHHHHHHHHHHh----CCCc--
Confidence 999988 3221111234679999999999999999987776 4555457789999999999998876654 3310
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCCcEEEEEccccCCceeEEeecHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeE
Q 006381 262 NPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSPITRARF-EELNMDLFRKCMEPVEKCLRDAKMDKSSVHDV 340 (647)
Q Consensus 262 ~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~~~d~~~~itr~~f-e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V 340 (647)
... ...+| ... .+.+ .+. .++++++ +++++++++++.+.|++.|+++ .+.++.|
T Consensus 246 ~i~-----~~~~e-------~~~--~~~~----~g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~~~i~~I 300 (346)
T 2fsj_A 246 PFD-----LAQEA-------LSH--PVMF----RQK----QVGGPEVSGPILEDLANRIIENIRLNLRGE---VDRVTSL 300 (346)
T ss_dssp CHH-----HHHHH-------TTS--CEEE----TTE----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---GGGEEEE
T ss_pred CCC-----HHHHh-------cCC--eEeE----CCc----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcccEE
Confidence 000 11222 111 1222 222 3558999 9999999999999999999876 4468999
Q ss_pred EEEcCCCCcHHHHHHHHhhhCCccc-cCCCCchhhHHhHHHHHHH
Q 006381 341 VLVGGSTRIPKVQQLLQDFFNGKEL-CKSINPDEAVAYGAAVQAA 384 (647)
Q Consensus 341 iLvGG~s~~p~v~~~l~~~f~~~~v-~~~~~p~~ava~GAa~~a~ 384 (647)
+|+||+|++ +++.|++.|+...+ ....||++|+|+|+..++.
T Consensus 301 vL~GGga~l--l~~~l~~~~~~~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 301 IPVGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp EEESTTHHH--HGGGGGGGSTTCBCCCCTTTTTTHHHHHHHHHHH
T ss_pred EEECCcHHH--HHHHHHHHCcCcEEeccCCCcHHHHHHHHHHHHh
Confidence 999999999 99999999963222 1267999999999998764
No 19
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.95 E-value=1.2e-27 Score=218.75 Aligned_cols=151 Identities=62% Similarity=0.973 Sum_probs=144.7
Q ss_pred EEeeecccceEEeeCCEEEEEEeCCCCCCCcceEEeeeccCCCCcEEEEEeecccccccCCccceeEEecCCCCCCCCCC
Q 006381 399 LLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVP 478 (647)
Q Consensus 399 ~~d~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~~~g~~ 478 (647)
+.|++|++||+++.+|.|.+||+||++||++++..|++..|+|+.+.|.+|||++..+.+|..||+|.|.|+||.|+|.+
T Consensus 2 v~Dv~p~slGi~~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~ 81 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ceEeecccEEEEEeCCEEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEcCCceEEEEEeeccCCcceeEEEecCCCCCCHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHH
Q 006381 479 QITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALE 549 (647)
Q Consensus 479 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~ls~~e~~~~~~~~~~~~~~d~~~~~~~~a~n~lE 549 (647)
+|+|+|++|.||+|+|++.+..+|++..++|.+..+.||+++++++++++++|..+|+..+++.++||.||
T Consensus 82 ~I~V~f~id~nGiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~kn~~e 152 (152)
T 2op6_A 82 QIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDADKFAADDQAQKEKVESRNELE 152 (152)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTCCEEEEEECSSSSCCCHHHHHHHHHHHHHTHHHHHHHHHHSCCCSEEC
T ss_pred eEEEEEEECCCcEEEEEEEEecCCcEEEEEeeccccCCCHHHHHHHHHHHHHhHhccHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999887789999999999999999999999999999998765
No 20
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.94 E-value=2.3e-26 Score=233.03 Aligned_cols=203 Identities=21% Similarity=0.333 Sum_probs=173.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHHHHcCCceeEecChhHHHHhcccccccccCCCCee
Q 006381 121 EEISSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKN 200 (647)
Q Consensus 121 ~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~ 200 (647)
.+....+|+++++.++...+..+..+++|+|++|+..+|+.++++++.+|+++..++.||+|++++|+.. .
T Consensus 70 ~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~---------~ 140 (272)
T 3h1q_A 70 YIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN---------D 140 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS---------S
T ss_pred HHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC---------C
Confidence 3556788899999888888888889999999999999999999999999999999999999999988642 2
Q ss_pred EEEEEeCCCceEEEEEEEeCCeEEEEEeeCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHc
Q 006381 201 VLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTL 280 (647)
Q Consensus 201 vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~L 280 (647)
.+|+|+||||++++++. .+.+. ......+||.+||+.+.+++. . + ...++++|+.+
T Consensus 141 ~~viDiGggst~~~~~~--~g~~~---~~~~~~~Gg~~~~~~l~~~l~--------~----~-------~~~ae~~k~~~ 196 (272)
T 3h1q_A 141 GIVVDIGGGTTGIAVIE--KGKIT---ATFDEPTGGTHLSLVLAGSYK--------I----P-------FEEAETIKKDF 196 (272)
T ss_dssp EEEEEECSSCEEEEEEE--TTEEE---EECCBSCCHHHHHHHHHHHHT--------C----C-------HHHHHHHHHSS
T ss_pred EEEEEECCCcEEEEEEE--CCEEE---EEecCCCcHHHHHHHHHHHhC--------C----C-------HHHHHHHHHhc
Confidence 59999999999999986 44332 456789999999999998873 1 1 46789999887
Q ss_pred CCCCcEEEEEccccCCceeEEeecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhh
Q 006381 281 SSTAQTTIEIDSLYEGIDFYSPITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFF 360 (647)
Q Consensus 281 s~~~~~~~~i~~~~~~~d~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f 360 (647)
+ ++.++++++.+.++++...+.+.++..+ +++.|+|+||++++|.+++.+++.|
T Consensus 197 ~----------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~~l 250 (272)
T 3h1q_A 197 S----------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSRFL 250 (272)
T ss_dssp T----------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHHHH
T ss_pred C----------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHHHh
Confidence 6 6899999999999999999999988654 4789999999999999999999999
Q ss_pred CCccccCCCCchhhHHhHHHHHH
Q 006381 361 NGKELCKSINPDEAVAYGAAVQA 383 (647)
Q Consensus 361 ~~~~v~~~~~p~~ava~GAa~~a 383 (647)
+.++..+.+|++++|+|||++|
T Consensus 251 -~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 251 -GKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp -SSCCBCCSSGGGHHHHHHHTTC
T ss_pred -CCCccccCChHHHHHHHHHhcC
Confidence 6788889999999999999864
No 21
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.93 E-value=4.6e-26 Score=245.15 Aligned_cols=227 Identities=16% Similarity=0.137 Sum_probs=164.2
Q ss_pred CCcEEEEeCCCCCHHHHHHHHHHH-HHcCCceeEecChhHHHHhc-ccccccccCCCCeeEEEEEeCCCceEEEEEEEeC
Q 006381 143 VKNAVVTVPAYFNDSQRQATKDAG-VIAGLNVMRIINEPTAAAIA-YGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEE 220 (647)
Q Consensus 143 ~~~~ViTVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaa~~-y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~ 220 (647)
...+|||+|++|+..+|+++.+++ +.+|++.+.+++||+||+++ |...... ..+.+.||+|+|+||||++++. +
T Consensus 107 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~--~~~~~glVvDiG~gtt~v~~v~--~ 182 (418)
T 1k8k_A 107 DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVG--ERTLTGTVIDSGDGVTHVIPVA--E 182 (418)
T ss_dssp GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCC--SCCCCEEEEEESSSCEEEEEEE--T
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccC--CCCCeEEEEEcCCCceEEEEeE--C
Confidence 457999999999999999999999 88999999999999999887 4211110 0122679999999999999985 4
Q ss_pred CeEEEEEeeCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCC----------------
Q 006381 221 GIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTA---------------- 284 (647)
Q Consensus 221 ~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~---------------- 284 (647)
+.. +........+||++||+.|.++|.+++. ...... -...+|++|+.++...
T Consensus 183 G~~-~~~~~~~~~lGG~~lt~~l~~~l~~~~~---~~~~~~-------~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~ 251 (418)
T 1k8k_A 183 GYV-IGSCIKHIPIAGRDITYFIQQLLRDREV---GIPPEQ-------SLETAKAVKERYSYVCPDLVKEFNKYDTDGSK 251 (418)
T ss_dssp TEE-CGGGCEEESCSHHHHHHHHHHHHHTTCC---CCCGGG-------HHHHHHHHHHHHCCCCSCHHHHHHHHHHSGGG
T ss_pred CEE-cccceEEEeCcHHHHHHHHHHHHHhcCC---CCCCHH-------HHHHHHHHHHhhchhcccHHHHHHhhcccccc
Confidence 432 2222355789999999999999875421 111110 1356788888876432
Q ss_pred -cEEEEEccccCCceeEEeecHHHH---HHHHHHHH------HHHHHHHHHHHHHcCC--CCCCCCeEEEEcCCCCcHHH
Q 006381 285 -QTTIEIDSLYEGIDFYSPITRARF---EELNMDLF------RKCMEPVEKCLRDAKM--DKSSVHDVVLVGGSTRIPKV 352 (647)
Q Consensus 285 -~~~~~i~~~~~~~d~~~~itr~~f---e~~~~~~~------~~~~~~i~~~l~~~~~--~~~~i~~ViLvGG~s~~p~v 352 (647)
...+.++....+....+.+++++| |.++.|.+ ..+.+.|.++|..+.. ....++.|+|+||+|++|.+
T Consensus 252 ~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~ 331 (418)
T 1k8k_A 252 WIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDF 331 (418)
T ss_dssp TCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTH
T ss_pred cceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCccccccH
Confidence 134556555555667889999999 55555542 4688888888887653 33447889999999999999
Q ss_pred HHHHHhhhCC-----------------------ccccCCCCchhhHHhHHHHHHH
Q 006381 353 QQLLQDFFNG-----------------------KELCKSINPDEAVAYGAAVQAA 384 (647)
Q Consensus 353 ~~~l~~~f~~-----------------------~~v~~~~~p~~ava~GAa~~a~ 384 (647)
+++|++.+.. .++..+.+|..++.+||+++|.
T Consensus 332 ~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 386 (418)
T 1k8k_A 332 GRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAS 386 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHc
Confidence 9998876521 1233455778999999999986
No 22
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.93 E-value=8.2e-26 Score=241.09 Aligned_cols=198 Identities=15% Similarity=0.155 Sum_probs=156.9
Q ss_pred HHHHHHHHHHHHcCCceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEEEEeCCeEEEEEeeCCCCCCh
Q 006381 157 SQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGG 236 (647)
Q Consensus 157 ~qr~~l~~Aa~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG 236 (647)
...+.+.+|++.|||++..++.||.|||++|..... ++..++|+|+||||||+++++ .+.+. +.++..+||
T Consensus 168 ~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~----~~~gv~vvDiGggttdisi~~--~g~~~---~~~~i~~GG 238 (419)
T 4a2a_A 168 KVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPE----KDRGVVVVNLGYNFTGLIAYK--NGVPI---KISYVPVGM 238 (419)
T ss_dssp HHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHHH----HHHCEEEEEECSSSEEEEEEE--TTEEE---EEEEESCCH
T ss_pred HHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhcccc----ccCCEEEEEECCCcEEEEEEE--CCEEE---EEEecccHH
Confidence 456788999999999999999999999998854332 356799999999999999986 45443 334578999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHcCCC-----CcEEEEEccccCCceeEEeecHHHHHHH
Q 006381 237 EDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSST-----AQTTIEIDSLYEGIDFYSPITRARFEEL 311 (647)
Q Consensus 237 ~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~-----~~~~~~i~~~~~~~d~~~~itr~~fe~~ 311 (647)
++||+.|+..+. . ....||++|+.++.. ....+.++.... .....++|++|+++
T Consensus 239 ~~it~dIa~~l~--------~-----------~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~~--~~~~~is~~~l~~i 297 (419)
T 4a2a_A 239 KHVIKDVSAVLD--------T-----------SFEESERLIITHGNAVYNDLKEEEIQYRGLDG--NTIKTTTAKKLSVI 297 (419)
T ss_dssp HHHHHHHHHHHT--------C-----------CHHHHHHHHHHHCCSCCTTCCCCEEEEECTTS--CSEEEEEHHHHHHH
T ss_pred HHHHHHHHHHHC--------C-----------CHHHHHHHHHHhccCcccCCCCceEEEeecCC--ccceEEcHHHHHHH
Confidence 999999987651 1 157899999998742 344566665432 45678999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCC------CCCCCeEEEEcCCCCcHHHHHHHHhhhCCcccc--C-----C----------
Q 006381 312 NMDLFRKCMEPVEKCLRDAKMD------KSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELC--K-----S---------- 368 (647)
Q Consensus 312 ~~~~~~~~~~~i~~~l~~~~~~------~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~--~-----~---------- 368 (647)
++|.++++.+.|++.|+.++.+ ...++.|+|+||+|++|.|++.+++.| +.++. . +
T Consensus 298 i~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~-g~~vri~~~~~~~p~~~~~~~~~~ 376 (419)
T 4a2a_A 298 IHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVF-KSPVRTGCYANSDRPSIINADEVA 376 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHH-TSCEEECCGGGSSSCCCBTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHH-CCCeEEEecCCCCchhccCccccc
Confidence 9999999999999999999873 456899999999999999999999999 45443 2 1
Q ss_pred CCchhhHHhHHHHHHHH
Q 006381 369 INPDEAVAYGAAVQAAI 385 (647)
Q Consensus 369 ~~p~~ava~GAa~~a~~ 385 (647)
.+|..++|.|.++++..
T Consensus 377 ~~P~~~t~~Gl~~~~~~ 393 (419)
T 4a2a_A 377 NDPSFAAAFGNVFAVSE 393 (419)
T ss_dssp TCGGGHHHHHTTCC---
T ss_pred CCchHHHHHHHHHHHhh
Confidence 38899999999998754
No 23
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.92 E-value=6.8e-25 Score=232.31 Aligned_cols=306 Identities=16% Similarity=0.174 Sum_probs=192.0
Q ss_pred CCEEEEecCccceEEEEEECCeeE-EEecCCCCcccce-EEEEcCCceEecHHHHHHHhhCcCchHHhhHHhhCCCCCCh
Q 006381 7 GPAIGIDLGTTYSCVGVWQHDRVE-IIANDQGNRTTPS-YVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDA 84 (647)
Q Consensus 7 ~~vvGID~GTt~s~va~~~~g~~~-ii~~~~g~~~~Ps-~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~~lg~~~~~~ 84 (647)
...|+||+||+++++++..++.+. ++++--|..+.++ .+.+.....++|++|.... .. ..+
T Consensus 5 ~~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~----~~--~~~----------- 67 (375)
T 2fxu_A 5 TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR----GI--LTL----------- 67 (375)
T ss_dssp CCCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHHT----TS--EEE-----------
T ss_pred CceEEEECCCCeEEEEECCCCCCceeeccccccccccccccCCCCCCeEechhHhhcC----cc--cce-----------
Confidence 357999999999999987544433 4433333322222 1122223567898886531 00 000
Q ss_pred hhhhcccCCCeEEEecCCCcceEEEEEcCceeEEeHHHHHHHHHHHHHHHHHHHhCCC--CCcEEEEeCCCCCHHHHHHH
Q 006381 85 TVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGST--VKNAVVTVPAYFNDSQRQAT 162 (647)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~--~~~~ViTVPa~~~~~qr~~l 162 (647)
.+|+. .| .... -+....+++|+.. +.++.. ...++||+|++++..+|+++
T Consensus 68 -------~~Pi~---------------~G--~i~d-~d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~r~~~ 119 (375)
T 2fxu_A 68 -------KYPIE---------------HG--IITN-WDDMEKIWHHTFY---NELRVAPEEHPTLLTEAPLNPKANREKM 119 (375)
T ss_dssp -------ECSEE---------------TT--EECC-HHHHHHHHHHHHH---TTSCCCGGGSCEEEEECTTCCHHHHHHH
T ss_pred -------ecccc---------------CC--cccC-HHHHHHHHHHHHH---HhcCCCCcCCcEEEEeCCCCcHHHHHHH
Confidence 11211 01 0011 1233344444432 223332 34699999999999999988
Q ss_pred HHH-HHHcCCceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEEEEeCCeEEEEEeeCCCCCChHHHHH
Q 006381 163 KDA-GVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDN 241 (647)
Q Consensus 163 ~~A-a~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~ 241 (647)
.++ .+.+|++.+.+++||+|||++++. .+.||+|+|+||||++.+ .+|. .+........+||+++|+
T Consensus 120 ~e~~fe~~g~~~~~~~~e~~aaa~a~g~---------~~~lVvDiG~gtt~v~~v--~~G~-~~~~~~~~~~~GG~~lt~ 187 (375)
T 2fxu_A 120 TQIMFETFNVPAMYVAIQAVLSLYASGR---------TTGIVLDSGDGVTHNVPI--YEGY-ALPHAIMRLDLAGRDLTD 187 (375)
T ss_dssp HHHHHHTTCCSEEEEEEHHHHHHHHTTC---------SSEEEEEECSSCEEEEEE--ETTE-ECGGGCEEESCCHHHHHH
T ss_pred HHHHHHhcCcceEEEccchheeeeecCC---------CeEEEEEcCCCceEEeEe--ECCE-EeccceEEeccCHHHHHH
Confidence 876 588899999999999999999874 257999999999999776 3553 222223457899999999
Q ss_pred HHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHcC----------------CCCcEEEEEccccCCceeEEeecH
Q 006381 242 RMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLS----------------STAQTTIEIDSLYEGIDFYSPITR 305 (647)
Q Consensus 242 ~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls----------------~~~~~~~~i~~~~~~~d~~~~itr 305 (647)
.|.+++..+ .+......+ ...+|++|+.++ ......+.++ ++ ..+.+++
T Consensus 188 ~l~~~l~~~---~~~~~~~~~-------~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lp---dg--~~i~i~~ 252 (375)
T 2fxu_A 188 YLMKILTER---GYSFVTTAE-------REIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP---DG--QVITIGN 252 (375)
T ss_dssp HHHHHHHHH---TCCCCSHHH-------HHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT---TS--CEEEEST
T ss_pred HHHHHHHhc---CCCCCcHHH-------HHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECC---CC--CEEEECh
Confidence 999999764 121110001 234555555543 2223334433 22 2467888
Q ss_pred HHH---HHHHHHH-----HHHHHHHHHHHHHHcCC--CCCCCCeEEEEcCCCCcHHHHHHHHhhhCC-------ccccCC
Q 006381 306 ARF---EELNMDL-----FRKCMEPVEKCLRDAKM--DKSSVHDVVLVGGSTRIPKVQQLLQDFFNG-------KELCKS 368 (647)
Q Consensus 306 ~~f---e~~~~~~-----~~~~~~~i~~~l~~~~~--~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~-------~~v~~~ 368 (647)
+.| |.++.|. ...+.+.|.++|..+.. ....++.|+|+||+|++|.++++|++.+.. .++..+
T Consensus 253 erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~~ 332 (375)
T 2fxu_A 253 ERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 332 (375)
T ss_dssp HHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEECC
T ss_pred hheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEcC
Confidence 877 4444443 24577778888875532 122357899999999999999999988731 345567
Q ss_pred CCchhhHHhHHHHHHH
Q 006381 369 INPDEAVAYGAAVQAA 384 (647)
Q Consensus 369 ~~p~~ava~GAa~~a~ 384 (647)
.+|..++++||+++|.
T Consensus 333 ~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 333 PERKYSVWIGGSILAS 348 (375)
T ss_dssp TTTTSHHHHHHHHHHH
T ss_pred CCCCccEEcchHHhhC
Confidence 7999999999999987
No 24
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.87 E-value=2.3e-22 Score=208.23 Aligned_cols=227 Identities=15% Similarity=0.196 Sum_probs=148.5
Q ss_pred EEeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCC-CCHH--HH--HHHHHH------------HHHcCCceeEecCh
Q 006381 117 QFAAEEISSMVLIKMREIAEAYLGSTVKNAVVTVPAY-FNDS--QR--QATKDA------------GVIAGLNVMRIINE 179 (647)
Q Consensus 117 ~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~ViTVPa~-~~~~--qr--~~l~~A------------a~~AGl~~~~li~E 179 (647)
.+++..+++.+ ..|+. +.. .+.+ .++|+++|.. |... || +++.+- .+.+++..+.++.|
T Consensus 73 ~~~~~~l~~i~-~aL~~-~~~-~~~~-~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e 148 (320)
T 2zgy_A 73 QYSDVNVVAVH-HALLT-SGL-PVSE-VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPE 148 (320)
T ss_dssp GGSHHHHHHHH-HHHHH-HSC-CSCE-EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEES
T ss_pred cchHHHHHHHH-HHHHH-cCC-CCce-EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecC
Confidence 45666666543 44432 211 1222 3699999987 6531 22 222211 23445677899999
Q ss_pred hHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEEEEeCCeEEEEEeeCCCCCChHHHHHHHHHHHHHHHHhhccCCC
Q 006381 180 PTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDI 259 (647)
Q Consensus 180 p~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~ 259 (647)
|.||+++|.... .++..++|+|+||||+|+++++ ++.+.+....++..+||.+||+.|.+++.++ +.++
T Consensus 149 ~~aa~~~~~~~~----~~~~~~~vvDiGggttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~-----~~~i 217 (320)
T 2zgy_A 149 SIPAGYEVLQEL----DELDSLLIIDLGGTTLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSLA-----RTKG 217 (320)
T ss_dssp SHHHHHHHHHHS----CTTCEEEEEEECSSCEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTCC-----SBGG
T ss_pred cHHHHHhhhccc----cCCCCEEEEEcCCCeEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHHc-----CCCC
Confidence 999999886322 2467899999999999999997 4445556667778999999999999988542 2222
Q ss_pred CCCHHHHHHHHHHHHHH-HHHcCCCCcEEEEEccccCCceeEEeecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q 006381 260 SGNPRALRRLRTSCERA-KRTLSSTAQTTIEIDSLYEGIDFYSPITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVH 338 (647)
Q Consensus 260 ~~~~~~~~~L~~~~e~~-K~~Ls~~~~~~~~i~~~~~~~d~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~ 338 (647)
+ ...+|++ |.. . ... ......+ ..-..+++.+++.+.++++.+.|.+.+++. .+++
T Consensus 218 --~-------~~~ae~~lk~~-~--~~~--~~~~~i~-----~~~~~~~~~~~i~~~~~~~~~~i~~~i~~~----~~~~ 274 (320)
T 2zgy_A 218 --S-------SYLADDIIIHR-K--DNN--YLKQRIN-----DENKISIVTEAMNEALRKLEQRVLNTLNEF----SGYT 274 (320)
T ss_dssp --G-------HHHHHHHHHTT-T--CHH--HHHHHSS-----SSCTHHHHHHHHHHHHHHHHHHHHHHHTTC----CCCC
T ss_pred --C-------HHHHHHHHHHh-h--hhh--cccceec-----CchhhHHHHHHHHHHHHHHHHHHHHHHHhh----cCCC
Confidence 1 1234444 332 0 000 0000000 011345666777777777777777777652 4689
Q ss_pred eEEEEcCCCCcHHHHHHHHhhhCCc--cccCCCCchhhHHhHHHHHH
Q 006381 339 DVVLVGGSTRIPKVQQLLQDFFNGK--ELCKSINPDEAVAYGAAVQA 383 (647)
Q Consensus 339 ~ViLvGG~s~~p~v~~~l~~~f~~~--~v~~~~~p~~ava~GAa~~a 383 (647)
.|+|+||+|++ +++.|++.|+.. ++....||++|+|+||++++
T Consensus 275 ~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 275 HVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp EEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred eEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 99999999987 999999999532 56778899999999999875
No 25
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.87 E-value=6.2e-22 Score=175.81 Aligned_cols=119 Identities=62% Similarity=0.946 Sum_probs=109.3
Q ss_pred ccceEEEeeecccceEEeeCCEEEEEEeCCCCCCCcceEEeeeccCCCCcEEEEEeecccccccCCccceeEEecCCCCC
Q 006381 394 VQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPA 473 (647)
Q Consensus 394 ~~~~~~~d~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~ 473 (647)
.+++.+.|++|+++|+++.++.|.++|+||++||++++++|++..|+|+.+.|.+|||++..+.+|..||+|.|.|+|+.
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~~n~~Lg~f~l~gipp~ 93 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPA 93 (135)
T ss_dssp -------CCCSSCCCEEETTTEECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSSSCSSSEEEEEEECCCCCSC
T ss_pred eCcEEEEEeecCcEEEEEECCEEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCcccccCcEEEEEEEeCCCCC
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeeEEEEEEcCCceEEEEEeeccCCcceeEEEecC
Q 006381 474 PRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITND 512 (647)
Q Consensus 474 ~~g~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~~~ 512 (647)
|+|.++|+|+|++|.||+|+|++.++.+|++.+++|+++
T Consensus 94 p~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~ 132 (135)
T 1q5l_A 94 PRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS 132 (135)
T ss_dssp CSSSCCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECS
T ss_pred CCceeEEEEEEEECCCCEEEEEEEECCCCCEEEEEEecC
Confidence 999999999999999999999999999999999999875
No 26
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.80 E-value=2.1e-20 Score=198.82 Aligned_cols=214 Identities=17% Similarity=0.189 Sum_probs=89.6
Q ss_pred CcEEEEeCCCCCHHHHHHHHHH-HHHcCCceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEEEEeCCe
Q 006381 144 KNAVVTVPAYFNDSQRQATKDA-GVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGI 222 (647)
Q Consensus 144 ~~~ViTVPa~~~~~qr~~l~~A-a~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~ 222 (647)
..++||+|+.++..+|+++.++ .+.+|++.+.++.||.||+++++. .+.+|+|+|+|||+++.+. +|.
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~---------~~~lVVDiG~g~T~v~pv~--~G~ 173 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL---------LTGVVVDSGDGVTHICPVY--EGF 173 (394)
T ss_dssp ----------------------------------------------------------CCEEEECSSCEEEECEE--TTE
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC---------ceEEEEEcCCCceEeeeeE--CCE
Confidence 3599999999999999998885 588899999999999999988864 2568999999999998773 343
Q ss_pred EEEEEeeCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCC----------------cE
Q 006381 223 FEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTA----------------QT 286 (647)
Q Consensus 223 ~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~----------------~~ 286 (647)
. +........+||+++|+.|.++|..+ .+......+ ...+|++|+.++... ..
T Consensus 174 ~-~~~~~~~~~~GG~~lt~~l~~~l~~~---~~~~~~~~~-------~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~~ 242 (394)
T 1k8k_B 174 S-LPHLTRRLDIAGRDITRYLIKLLLLR---GYAFNHSAD-------FETVRMIKEKLCYVGYNIEQEQKLALETTVLVE 242 (394)
T ss_dssp E-CSTTCEEESCCHHHHHHHHHHHHHHT---TCCCCTTTT-------HHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCE
T ss_pred E-cccceEEeeccHHHHHHHHHHHHHhc---CCCCCcHHH-------HHHHHHHHHhheeEecCHHHHHHhhccCCcCce
Confidence 2 11112346899999999999998653 122211122 235666666654321 12
Q ss_pred EEEEccccCCceeEEeecHHHHH---HHHHHH-----HHHHHHHHHHHHHHcCCC--CCCCCeEEEEcCCCCcHHHHHHH
Q 006381 287 TIEIDSLYEGIDFYSPITRARFE---ELNMDL-----FRKCMEPVEKCLRDAKMD--KSSVHDVVLVGGSTRIPKVQQLL 356 (647)
Q Consensus 287 ~~~i~~~~~~~d~~~~itr~~fe---~~~~~~-----~~~~~~~i~~~l~~~~~~--~~~i~~ViLvGG~s~~p~v~~~l 356 (647)
.+.++ ++. .+.++++.|+ -++.|. ...+.+.|.+.|..+..+ ..-.+.|+|+||+|.+|.+.++|
T Consensus 243 ~~~lp---dg~--~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl 317 (394)
T 1k8k_B 243 SYTLP---DGR--IIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRL 317 (394)
T ss_dssp EEECT---TSC--EEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHH
T ss_pred EEECC---CCC--EEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHH
Confidence 22222 222 4567777773 333332 234677788888876432 22257899999999999999998
Q ss_pred HhhhCC------------------ccccCCCCchhhHHhHHHHHHH
Q 006381 357 QDFFNG------------------KELCKSINPDEAVAYGAAVQAA 384 (647)
Q Consensus 357 ~~~f~~------------------~~v~~~~~p~~ava~GAa~~a~ 384 (647)
++.+.. .++..+.+|..++.+|++++|.
T Consensus 318 ~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 363 (394)
T 1k8k_B 318 ERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLAD 363 (394)
T ss_dssp HHHHHHHHHHHTCSSCCCTTCCCCC---------------------
T ss_pred HHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhC
Confidence 887621 1223356778999999999886
No 27
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.78 E-value=2.6e-18 Score=174.00 Aligned_cols=183 Identities=18% Similarity=0.183 Sum_probs=124.3
Q ss_pred HcCCceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEEEEeCCeEEEEEeeCCCCCChHHHHHHHHHHH
Q 006381 168 IAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHF 247 (647)
Q Consensus 168 ~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l 247 (647)
.++...+..++||+|+++++.+... ....|+|+|||+++++++. .++.++.....+.+..|+.+|+..+++++
T Consensus 68 ~a~~~~~~~Vne~~aha~a~~~~~~------~~~~vl~lgG~~~~~~~~~-~~g~~~~~~~~~~~~~g~G~f~d~~a~~l 140 (276)
T 4ehu_A 68 MNYSDADKQISELSCHARGVNFIIP------ETRTIIDIGGQDAKVLKLD-NNGRLLNFLMNDKCAAGTGRFLDVMAKII 140 (276)
T ss_dssp GGCCSCSEECCHHHHHHHHHHHHST------TCCEEEEECSSCEEEEEEC-TTSCEEEEEEECSCSTTSHHHHHHHHHHH
T ss_pred HHhhCCCcccchHHHHHHHHHHhCC------CCCeEEEEcCCCceEEEEE-ecCceEEEEeCCCcCcchhhHHHHHHHHh
Confidence 3566778999999999987755433 2347899999999999885 56788888888999999999999999888
Q ss_pred HHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCCcEEEEEccccCCceeE------EeecHHHHHHHHHHHHHHHHH
Q 006381 248 VQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFY------SPITRARFEELNMDLFRKCME 321 (647)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~~~d~~------~~itr~~fe~~~~~~~~~~~~ 321 (647)
.-.|..... + .+......+ +.+. ...|. ..-.....++++..+.+.+.+
T Consensus 141 ~~~~~~~~~------------~---------~~~a~~~~~--i~~~--~~~f~~s~~~~~~~~~~~~~di~a~~~~~v~~ 195 (276)
T 4ehu_A 141 EVDVSELGS------------I---------SMNSQNEVS--ISST--CTVFAESEVISHLSENAKIEDIVAGIHTSVAK 195 (276)
T ss_dssp TCCGGGHHH------------H---------HTTCSSCCC--CCCC--SHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred ccChhhhHH------------H---------HhcCCCCCC--cCCc--cchhhhhHHHHhhhccccHHHHHHHHHHHHHH
Confidence 543322110 0 000000000 0000 00000 000001134566666666666
Q ss_pred HHHHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHHHHHHHHc
Q 006381 322 PVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILS 387 (647)
Q Consensus 322 ~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~~~ 387 (647)
.+.....+. ..++.|+|+||.+++|.|++.+++.| +.++..+.+|++++|+|||++|....
T Consensus 196 ~l~~~~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~-g~~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 196 RVSSLVKRI----GVQRNVVMVGGVARNSGIVRAMAREI-NTEIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp HHHHHHHHH----CCCSSEEEESGGGGCHHHHHHHHHHH-TSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHhc----ccCCeEEEecCccchHHHHHHHHHHH-CCCeeeCCCcchHHHHHHHHHHHHHH
Confidence 555544443 34689999999999999999999999 78899999999999999999997544
No 28
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=99.78 E-value=1.1e-18 Score=150.75 Aligned_cols=111 Identities=56% Similarity=0.925 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchhhcCCCCHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHH
Q 006381 537 EHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKM 616 (647)
Q Consensus 537 ~~~~~~~a~n~lE~~i~~~r~~l~~~~~~~~~~~~~~~~i~~~l~~~~~wl~~~~~~~~~~~~~k~~~l~~~~~~i~~r~ 616 (647)
.++++.++||.||+|||.+++.|.++.+...++++++..|...++++.+||+++.+++.++|+.++++|++++.||..|+
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~~~~~kl~~eek~~i~~~i~e~~~wL~~~~~a~~e~i~~k~~eL~~~~~~i~~k~ 82 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGL 82 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCGGGBTTBCHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46778999999999999999999876688999999999999999999999999877899999999999999999999999
Q ss_pred hcccCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 006381 617 YQGAGGDMGGAMDDDVPAGGSGAGPKIEEVD 647 (647)
Q Consensus 617 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (647)
++++|++++|++|+|.+++++..+|+|||||
T Consensus 83 y~~~~~~~~~~~~~~~~~~~~~~gp~~eevd 113 (113)
T 3lof_A 83 YQGAGGPGPGGFGAQGPKGGSGSGPTIEEVD 113 (113)
T ss_dssp HHC----------------------------
T ss_pred HHhccCCCCCCCCCCCCCCCCCCCCCCCCCC
Confidence 9865433333334444445567789999998
No 29
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.71 E-value=4.1e-17 Score=170.20 Aligned_cols=205 Identities=14% Similarity=0.202 Sum_probs=137.9
Q ss_pred cEEEEeCCCCCHHHH-HHHHHHHHHcCC------------ceeEecChhHHHHhcccccccccC--CCCeeEEEEEeCCC
Q 006381 145 NAVVTVPAYFNDSQR-QATKDAGVIAGL------------NVMRIINEPTAAAIAYGLDKKATS--VGEKNVLIFDLGGG 209 (647)
Q Consensus 145 ~~ViTVPa~~~~~qr-~~l~~Aa~~AGl------------~~~~li~Ep~Aaa~~y~~~~~~~~--~~~~~vlV~D~Ggg 209 (647)
.+++.+|..+...+| +++++++..++- ..+.++.||.||++++.++..... ..+..++|+|+|||
T Consensus 115 ~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGgg 194 (355)
T 3js6_A 115 VIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSG 194 (355)
T ss_dssp EEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSS
T ss_pred EEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCCC
Confidence 689999999988887 589998875542 467899999999999876542100 03678999999999
Q ss_pred ceEEEEEEEeCCeEEEEEeeCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCCcEEEE
Q 006381 210 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIE 289 (647)
Q Consensus 210 T~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~ 289 (647)
|||++++ .++.+. ....+...+||..+++.+.+++.+++. +..+. . ...++.+. +.
T Consensus 195 Ttd~~v~--~~~~~~-~~~s~s~~~G~~~~~~~i~~~l~~~~~---g~~l~--~-------~~i~~g~~---------~~ 250 (355)
T 3js6_A 195 TTIIDTY--QNMKRV-EEESFVINKGTIDFYKRIASHVSKKSE---GASIT--P-------RMIEKGLE---------YK 250 (355)
T ss_dssp CEEEEEE--ETTEEC-GGGCEEESCCHHHHHHHHHHHTC-----------C--H-------HHHHSCCC-----------
T ss_pred cEEEEEE--cCCEEc-cccccCcchHHHHHHHHHHHHHHHhcC---CCcCC--H-------HHHhcCCc---------cc
Confidence 9999998 344321 112233579999999999999877532 11111 1 11111110 00
Q ss_pred EccccCCce--eEEeecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCCCcHH--HHHHHHhhhCCccc
Q 006381 290 IDSLYEGID--FYSPITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPK--VQQLLQDFFNGKEL 365 (647)
Q Consensus 290 i~~~~~~~d--~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~--v~~~l~~~f~~~~v 365 (647)
. .+.+ -...+ .+.+++.+++.+++++..|++.+.+ +..++.|+|+||++.++. |.+.|++.|+..
T Consensus 251 ~----~~~~~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~-- 319 (355)
T 3js6_A 251 Q----CKLNQKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEKA-- 319 (355)
T ss_dssp ---------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEECC--
T ss_pred c----ccccccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCCC--
Confidence 0 0000 01122 3456777777777777777777653 456799999999999998 889999988532
Q ss_pred cCCCCchhhHHhHHHHHHHHHc
Q 006381 366 CKSINPDEAVAYGAAVQAAILS 387 (647)
Q Consensus 366 ~~~~~p~~ava~GAa~~a~~~~ 387 (647)
.||..|+|+|+..++..+.
T Consensus 320 ---~~p~~anA~G~~~~~~~~~ 338 (355)
T 3js6_A 320 ---DDSQFSNVRGYEKLGELLK 338 (355)
T ss_dssp ---SSGGGHHHHHHHHHHHHHH
T ss_pred ---CCcHHHHHHHHHHHHHHHH
Confidence 8999999999999998765
No 30
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=99.66 E-value=9.9e-17 Score=139.65 Aligned_cols=107 Identities=50% Similarity=0.814 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhccchhhcCCCCHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHhc
Q 006381 539 KKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 618 (647)
Q Consensus 539 ~~~~~a~n~lE~~i~~~r~~l~~~~~~~~~~~~~~~~i~~~l~~~~~wl~~~~~~~~~~~~~k~~~l~~~~~~i~~r~~e 618 (647)
+++.++||.||+|||.+++.|.++.+...+++++++.|...++++.+||+++.+++.++|+.++++|++++.||..|+++
T Consensus 14 re~iEarN~aEsliy~~e~~L~e~~~~dkl~~eek~~I~~~i~el~~~L~~~~~ad~e~ik~k~~eL~~~~~~i~~k~y~ 93 (120)
T 2p32_A 14 LVPRGSHMGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLYQ 93 (120)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTCTTTGGGSCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999999999999976457788999999999999999999999766689999999999999999999999986
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 006381 619 GAGGDMGGAMDDDVPAGGSGAGPKIEEVD 647 (647)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (647)
++++.||| |+|.++|+.+.+|+|||||
T Consensus 94 ~~~~~~~~--~~~~~~~~~~~~~~~ee~d 120 (120)
T 2p32_A 94 SAGGAPPG--AAPGGAAGGAGGPTIEEVD 120 (120)
T ss_dssp C----------------------------
T ss_pred hccCCCCC--CCCCCCCCCCCCCCCCCCC
Confidence 55443333 3334446667789999998
No 31
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=99.60 E-value=7e-16 Score=133.20 Aligned_cols=107 Identities=51% Similarity=0.882 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHHHHHhhccchhhcCCCCHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHhccc
Q 006381 541 KVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQGA 620 (647)
Q Consensus 541 ~~~a~n~lE~~i~~~r~~l~~~~~~~~~~~~~~~~i~~~l~~~~~wl~~~~~~~~~~~~~k~~~l~~~~~~i~~r~~e~~ 620 (647)
+.++||.||+|||.+++.|.++++...+++++++.|...++++.+||+++.+++.++|+.++++|++++.||..|+++++
T Consensus 2 l~EarN~aE~~iy~~e~~L~~~e~~~kl~~~ek~~i~~~i~~l~~~L~~~~~ad~~~i~~~~~~L~~~~~~i~~~~~~~~ 81 (113)
T 1ud0_A 2 VPRGSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSA 81 (113)
T ss_dssp --CCHHHHHHHHHHHHHHHTSGGGTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS
T ss_pred hHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 56789999999999999997545888999999999999999999999865556889999999999999999999998755
Q ss_pred CCCCCC---CCCCC-C-CCCCCCCCCCCCCCC
Q 006381 621 GGDMGG---AMDDD-V-PAGGSGAGPKIEEVD 647 (647)
Q Consensus 621 ~~~~~~---~~~~~-~-~~~~~~~~~~~~~~~ 647 (647)
++.||| .+|++ + ++|++..+|+|||||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~d 113 (113)
T 1ud0_A 82 GGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 113 (113)
T ss_dssp CCCCCC--------------------------
T ss_pred cCCCCCCCCCCCCcccCCCCCCCCCCCcccCC
Confidence 432222 22211 2 234446789999998
No 32
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.57 E-value=2e-16 Score=163.68 Aligned_cols=205 Identities=14% Similarity=0.173 Sum_probs=138.8
Q ss_pred CcEEEEeCCCCCH--HHHHHHHHHHHHc--------C------CceeEecChhHHHHhcccccccccCCCCeeEEEEEeC
Q 006381 144 KNAVVTVPAYFND--SQRQATKDAGVIA--------G------LNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLG 207 (647)
Q Consensus 144 ~~~ViTVPa~~~~--~qr~~l~~Aa~~A--------G------l~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~G 207 (647)
..+++++|..+.. .+|+.+++....- | +..+.+++||.+|.+.+. .. .++..++|+|+|
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~--~~---~~~~~v~vvDiG 180 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ--EN---FKNKNVAVIDFG 180 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC--CC---CTTCEEEEEEEC
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc--hh---hccCCEEEEEeC
Confidence 3689999998764 3677777765521 1 134678999998876652 11 246789999999
Q ss_pred CCceEEEEEEEeCCeEEEEEeeCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCCcEE
Q 006381 208 GGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTT 287 (647)
Q Consensus 208 ggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~ 287 (647)
|||||++++. .+.+ +....+...+||..+++.|.+++.+ .+++..+.. ..+|++|+. .. ..
T Consensus 181 ggTtd~~v~~--~g~~-~~~~~~~~~~G~~~~~~~i~~~l~~---~~~g~~i~~---------~~~e~i~~~--g~--~~ 241 (329)
T 4apw_A 181 GLNMGFSLYR--NCVV-NPSERFIEEHGVKDLIIRVGDALTD---LNNGNLITN---------EQAESALNN--GY--MK 241 (329)
T ss_dssp SSCEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHTSSSS---CSSCSCTTS---------BTTTTCSSS--CS--SC
T ss_pred CCcEEEEEEE--CCEE-eeccccchhhHHHHHHHHHHHHHHh---hccCCCCCH---------HHHHHHHhc--CC--cc
Confidence 9999999997 3433 2222345679999999999987754 034433321 123333332 11 00
Q ss_pred EEEccccCCceeEEeecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhCCccccC
Q 006381 288 IEIDSLYEGIDFYSPITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCK 367 (647)
Q Consensus 288 ~~i~~~~~~~d~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~ 367 (647)
.+.+. ..+..+.+++.+++.++.+.+.|++. +.++..++.|+|+||++.+ +.+.|++.|+ .++..
T Consensus 242 -------~g~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~~~l~~~~~-~~v~v 306 (329)
T 4apw_A 242 -------KGGEI-DTESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LKEQISKTYP-NNSII 306 (329)
T ss_dssp -------EECTT-CCSTTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HHHHHHHHST-TCEEC
T ss_pred -------cCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HHHHHHHHcC-CCCEe
Confidence 01111 13456777777777777777777665 3445558999999999998 6799999994 45677
Q ss_pred CCCchhhHHhHHHHHHHHHc
Q 006381 368 SINPDEAVAYGAAVQAAILS 387 (647)
Q Consensus 368 ~~~p~~ava~GAa~~a~~~~ 387 (647)
..||..|+|+|+..++....
T Consensus 307 ~~~P~~a~a~G~~~~~~~k~ 326 (329)
T 4apw_A 307 TNNSQWTTCEGLYKVAVAKY 326 (329)
T ss_dssp CSSGGGHHHHHHHHHHHHHH
T ss_pred cCCChhhHHHHHHHHHhhhh
Confidence 88999999999999887554
No 33
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.52 E-value=1e-14 Score=155.50 Aligned_cols=224 Identities=17% Similarity=0.143 Sum_probs=142.4
Q ss_pred CcEEEEeCCCCCHHHHHHHHHHH-HHcCCceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEEEEeCCe
Q 006381 144 KNAVVTVPAYFNDSQRQATKDAG-VIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGI 222 (647)
Q Consensus 144 ~~~ViTVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~ 222 (647)
..+++|.|...+...|+.+.+.+ +.+|++.+.++.+|.+|+++.+..... .....+-||+|+|+|+|+++.+. +|.
T Consensus 124 ~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~-~~~~~tglVVDiG~g~T~v~PV~--~G~ 200 (427)
T 3dwl_A 124 HYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKV-TDRSLTGTVVDSGDGVTHIIPVA--EGY 200 (427)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTT-CSCCCCEEEEEESSSCEEEEEEE--TTE
T ss_pred CcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccc-cCCCceEEEEECCCCceEEEEEE--CCE
Confidence 47999999999999999998877 789999999999999999887753211 01134679999999999999883 231
Q ss_pred EEEEEeeCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCCcE-----------EEEEc
Q 006381 223 FEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQT-----------TIEID 291 (647)
Q Consensus 223 ~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~-----------~~~i~ 291 (647)
.- ........+||+++|+.|.++|..+... .. =...++.+|+.++..... ...+.
T Consensus 201 ~l-~~~~~rl~~gG~~lt~~L~~lL~~~~~~------~~-------~~~~~~~IKe~~cyv~~d~~~e~~~~~~~~~~~~ 266 (427)
T 3dwl_A 201 VI-GSSIKTMPLAGRDVTYFVQSLLRDRNEP------DS-------SLKTAERIKEECCYVCPDIVKEFSRFDREPDRYL 266 (427)
T ss_dssp EC-GGGCEEESCCHHHHHHHHHHTTC---------------------CHHHHHHHHHHCCCCSCHHHHHHHTTC-----C
T ss_pred Ee-hhhheeccccHHHHHHHHHHHHHHcCCC------ch-------hHHHHHHHHHhcCcccCCHHHHHHHhhcCccccc
Confidence 10 1111224799999999999988654321 00 024567777776542110 00011
Q ss_pred c--c--cCCceeEEeecHHHH---HHHHHHH------HHHHHHHHHHHHHHcCCCC--CCCCeEEEEcCCCCcHHHHHHH
Q 006381 292 S--L--YEGIDFYSPITRARF---EELNMDL------FRKCMEPVEKCLRDAKMDK--SSVHDVVLVGGSTRIPKVQQLL 356 (647)
Q Consensus 292 ~--~--~~~~d~~~~itr~~f---e~~~~~~------~~~~~~~i~~~l~~~~~~~--~~i~~ViLvGG~s~~p~v~~~l 356 (647)
. + .++....+++..++| |-++.|- ...+.+.|.+.|.++..+. .-...|+|+||+|.+|.+.++|
T Consensus 267 ~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL 346 (427)
T 3dwl_A 267 KYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRL 346 (427)
T ss_dssp CBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHHH
T ss_pred eeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHHH
Confidence 0 1 123334566777776 3444441 2346777777777543211 1135699999999999999988
Q ss_pred Hhhh----C---------------C--ccccCCCCchhhHHhHHHHHHH
Q 006381 357 QDFF----N---------------G--KELCKSINPDEAVAYGAAVQAA 384 (647)
Q Consensus 357 ~~~f----~---------------~--~~v~~~~~p~~ava~GAa~~a~ 384 (647)
++.+ + . .++..+.++..++=+|++++|.
T Consensus 347 ~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilas 395 (427)
T 3dwl_A 347 QRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQ 395 (427)
T ss_dssp HHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHH
T ss_pred HHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeecc
Confidence 8755 1 1 1233445677899999999985
No 34
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.50 E-value=1.1e-13 Score=148.98 Aligned_cols=178 Identities=15% Similarity=0.142 Sum_probs=115.9
Q ss_pred CEEEEecCccceEEEEEECCeeEEEecCCCCcccceEEEEcCC----ceEecHHHHHHHhhCcCchHHhhHHhhCCCCCC
Q 006381 8 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDS----ERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSD 83 (647)
Q Consensus 8 ~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~----~~~~G~~A~~~~~~~p~~~~~~~k~~lg~~~~~ 83 (647)
..|+||+||.++++++...+.|.+ .+||+|+.... ..+||.++.... +.+
T Consensus 24 ~~iVID~GS~~~kaG~ag~~~P~~--------v~PSvVg~~~~~~~~~~~vG~e~~~~~---r~~--------------- 77 (498)
T 3qb0_A 24 SAVVIDPGSYTTNIGYSGSDFPQS--------ILPSVYGKYTADEGNKKIFSEQSIGIP---RKD--------------- 77 (498)
T ss_dssp SCEEEECCSSEEEEEETTCSSCSE--------EEESEEEEESSCSSCCEECCTTGGGSC---CTT---------------
T ss_pred CeEEEECCCcEEEEEECCCCCeee--------ecCceeEEeccCCCccEEEecHHHhcC---cCc---------------
Confidence 578999999999999875443332 36999988542 457787532210 000
Q ss_pred hhhhhcccCCCeEEEecCCCcceEEEEEcCceeEEeHHHHHHHHHHHHHHHHHHHhCCC--CC-cEEEEeCCCCCHHHHH
Q 006381 84 ATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGST--VK-NAVVTVPAYFNDSQRQ 160 (647)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~--~~-~~ViTVPa~~~~~qr~ 160 (647)
..-..|++ .| .+.--+....++.|+.. ..++.. -. .++||.|...+...|+
T Consensus 78 -----l~l~~Pi~---------------~G---vI~dwd~~E~iw~~~f~---~~L~v~p~~~~pvlltep~~n~~~~Re 131 (498)
T 3qb0_A 78 -----YELKPIIE---------------NG---LVIDWDTAQEQWQWALQ---NELYLNSNSGIPALLTEPVWNSTENRK 131 (498)
T ss_dssp -----EEEEESEE---------------TT---EESCHHHHHHHHHHHHH---HTSCCSCCTTCCEEEEECTTCCHHHHH
T ss_pred -----eEEeccCc---------------CC---EEccHHHHHHHHHHHHH---hhhCCCcccCCceEEEeCCCCcHHHHH
Confidence 00011111 11 11212344455555443 223322 23 5899999999999999
Q ss_pred HHHHH-HHHcCCceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEEEEeCCeEEEEEeeCCCCCChHHH
Q 006381 161 ATKDA-GVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDF 239 (647)
Q Consensus 161 ~l~~A-a~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~ 239 (647)
++.+. ++.+|++.+.++.+|.||+++++.. +-||+|+|+|+|+++.+. .|.. +........+||+++
T Consensus 132 ~~~eilFE~f~vpav~l~~~~vlalya~G~~---------tglVVDiG~g~T~vvPI~--~G~~-l~~ai~rl~vgG~~l 199 (498)
T 3qb0_A 132 KSLEVLLEGMQFEACYLAPTSTCVSFAAGRP---------NCLVVDIGHDTCSVSPIV--DGMT-LSKSTRRNFIAGKFI 199 (498)
T ss_dssp HHHHHHHTTSCCSEEEEEEHHHHHHHHHTCS---------SEEEEEECSSCEEEEEEE--TTEE-CGGGCEEESCSHHHH
T ss_pred HHHHHHHhhcCCCeEeecchHHHHHHHcCCC---------eEEEEEcCCCcEEEEEEe--CCEE-ccccceeccccHHHH
Confidence 99886 4789999999999999999877641 249999999999999884 3321 111112257999999
Q ss_pred HHHHHHHHHH
Q 006381 240 DNRMVNHFVQ 249 (647)
Q Consensus 240 d~~l~~~l~~ 249 (647)
|+.|.++|..
T Consensus 200 t~~L~~lL~~ 209 (498)
T 3qb0_A 200 NHLIKKALEP 209 (498)
T ss_dssp HHHHHHHTTT
T ss_pred HHHHHHHHHh
Confidence 9999999854
No 35
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.22 E-value=2e-09 Score=120.58 Aligned_cols=117 Identities=17% Similarity=0.240 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHHHH-HHhCCCCC-----cEEEEeCCCCCHHHHHHHHHH-HHHcCCceeEecChhHHHHhccccccc
Q 006381 120 AEEISSMVLIKMREIAE-AYLGSTVK-----NAVVTVPAYFNDSQRQATKDA-GVIAGLNVMRIINEPTAAAIAYGLDKK 192 (647)
Q Consensus 120 ~~ev~a~~L~~l~~~a~-~~~~~~~~-----~~ViTVPa~~~~~qr~~l~~A-a~~AGl~~~~li~Ep~Aaa~~y~~~~~ 192 (647)
..+.... +..|++++- ..++.... .+++|.|..++...|+.|.+. .+..|++.+.++.++.+|+++++.
T Consensus 170 ~~~~wdd-~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~--- 245 (593)
T 4fo0_A 170 LTAVLAD-IEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGL--- 245 (593)
T ss_dssp HHHHHHH-HHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTC---
T ss_pred hhcCHHH-HHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCC---
Confidence 3444433 344555543 45665443 399999999999999888774 677899999999999999988754
Q ss_pred ccCCCCeeEEEEEeCCCceEEEEEEEeCCeEEEEEeeCCCCCChHHHHHHHHHHHHH
Q 006381 193 ATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQ 249 (647)
Q Consensus 193 ~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~ 249 (647)
.+-+|||+|.+.|.|+-+. +|.. +........+||.++++.|.++|..
T Consensus 246 ------~tglVVDiG~~~T~v~PV~--dG~~-l~~~~~rl~~GG~~lt~~L~~lL~~ 293 (593)
T 4fo0_A 246 ------SSTCIVDVGDQKTSVCCVE--DGVS-HRNTRLCLAYGGSDVSRCFYWLMQR 293 (593)
T ss_dssp ------SEEEEEEECSSCEEEEEEE--SSCB-CGGGCEEESCCHHHHHHHHHHHHHH
T ss_pred ------CceEEEEeCCCceeeeeeE--CCEE-ehhheEEecccHHHHHHHHHHHHHh
Confidence 2568999999999998774 2211 0011112479999999999988865
No 36
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.19 E-value=1.7e-11 Score=128.76 Aligned_cols=197 Identities=22% Similarity=0.224 Sum_probs=132.4
Q ss_pred HHHHHHHHHHHHHc-CC--ceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEEEEeCCeEEEEEeeCCC
Q 006381 156 DSQRQATKDAGVIA-GL--NVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDT 232 (647)
Q Consensus 156 ~~qr~~l~~Aa~~A-Gl--~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~ 232 (647)
..+-+.+.+|.+.+ |+ ++-. .||.||+++...+.. .+..+.++|+||||||++++.-.. +.+....
T Consensus 367 ~~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE----~eLGvaiIDmGGGTTd~sVf~~G~-----lv~a~~i 435 (610)
T 2d0o_A 367 RLQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPG----TTRPLAILDLGAGSTDASIINPKG-----DIIATHL 435 (610)
T ss_dssp CCCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTT----CCSSEEEEEECSSEEEEEEECTTC-----CEEEEEE
T ss_pred HHHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC----CcCCeEEEEeCCCcceEEEEcCCc-----EEEEEEe
Confidence 34567888999999 99 6555 999999998866554 467899999999999999996544 2233336
Q ss_pred CCChHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHcCCC----------CcEEEEE--ccccCC---c
Q 006381 233 HLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSST----------AQTTIEI--DSLYEG---I 297 (647)
Q Consensus 233 ~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~----------~~~~~~i--~~~~~~---~ 297 (647)
..||+.++..|..-|.-. + +..||++|+ .... ....+.+ +.+... .
T Consensus 436 p~gG~~VT~DIA~~Lgt~-----------d-------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~~R 496 (610)
T 2d0o_A 436 AGAGDMVTMIIARELGLE-----------D-------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVFAR 496 (610)
T ss_dssp ECSHHHHHHHHHHHHTCC-----------C-------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTC
T ss_pred ccchHHHHHHHHHHhCCC-----------C-------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeee
Confidence 789999999998776211 1 457999999 4221 1112333 222110 1
Q ss_pred ------eeEEeecHHH--HHHHHHHHHHHHHHH--HHHHHHHcCC-----CCCCCCeEEEEcCCCCcHHHHHHHHhhhCC
Q 006381 298 ------DFYSPITRAR--FEELNMDLFRKCMEP--VEKCLRDAKM-----DKSSVHDVVLVGGSTRIPKVQQLLQDFFNG 362 (647)
Q Consensus 298 ------d~~~~itr~~--fe~~~~~~~~~~~~~--i~~~l~~~~~-----~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~ 362 (647)
+.-..| +.+ +|+ ++-+-+++.+. +.++|+..+. ...+|..|+|+||+|.++.+.++.++.|..
T Consensus 497 v~~~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~ 574 (610)
T 2d0o_A 497 VCVVKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAH 574 (610)
T ss_dssp EEEECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTT
T ss_pred eecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCc
Confidence 112345 566 666 55444444443 2333554332 234679999999999999999999999943
Q ss_pred ccc-------cCCCCchhhHHhHHHHHHH
Q 006381 363 KEL-------CKSINPDEAVAYGAAVQAA 384 (647)
Q Consensus 363 ~~v-------~~~~~p~~ava~GAa~~a~ 384 (647)
.++ ...-.|..|+|.|.+++.+
T Consensus 575 y~VRiGrP~~~gv~gP~fAtAvGLlly~~ 603 (610)
T 2d0o_A 575 YRLVAGRGNIRGSEGPRNAVATGLILSWH 603 (610)
T ss_dssp SSCEEEECCGGGTSTTSCHHHHHHHHHHH
T ss_pred CCeEEecCCccccCCCcHHHHHHHHHHHh
Confidence 122 2245899999999998765
No 37
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.17 E-value=2.6e-11 Score=127.82 Aligned_cols=194 Identities=22% Similarity=0.207 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHc-CC--ceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEEEEeCCeEEEEEeeCCCCC
Q 006381 158 QRQATKDAGVIA-GL--NVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHL 234 (647)
Q Consensus 158 qr~~l~~Aa~~A-Gl--~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~l 234 (647)
+-+.+.+|.+.+ |+ ++-. .||.||+++...+.. .+..+.++|+||||||++++.-.. +.+......
T Consensus 371 ~m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTedE----~elGvaiIDmGgGTTd~sVf~~g~-----lv~a~~ip~ 439 (607)
T 1nbw_A 371 QMQVIARELSARLQTEVVVGG--VEANMAIAGALTTPG----CAAPLAILDLGAGSTDAAIVNAEG-----QITAVHLAG 439 (607)
T ss_dssp CSCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTSTT----CCSSEEEEEECSSEEEEEEECSSS-----CEEEEEEEC
T ss_pred HHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC----CcCCeEEEEeCCCcceEEEEcCCc-----EEEEEEecc
Confidence 346678888999 99 5545 999999998866554 467899999999999999996555 233333678
Q ss_pred ChHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHcCCC----------CcEEEEE--ccccCC---c--
Q 006381 235 GGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSST----------AQTTIEI--DSLYEG---I-- 297 (647)
Q Consensus 235 GG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~----------~~~~~~i--~~~~~~---~-- 297 (647)
||+.++..|..-|.-. + +..||++|+ .... ....+.+ +.+... .
T Consensus 440 gG~~VT~DIA~~Lg~~-----------d-------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~~~R~~ 500 (607)
T 1nbw_A 440 AGNMVSLLIKTELGLE-----------D-------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPAVFAKVV 500 (607)
T ss_dssp CHHHHHHHHHHHHTCS-----------C-------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCEE
T ss_pred chHHHHHHHHHHhCCC-----------C-------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeeee
Confidence 9999999998776211 0 457999999 4221 1112333 222110 1
Q ss_pred ----eeEEeecHHH--HHHHHHHHHHHHHHH--HHHHHHHcCCC-----CCCCCeEEEEcCCCCcHHHHHHHHhhhCCcc
Q 006381 298 ----DFYSPITRAR--FEELNMDLFRKCMEP--VEKCLRDAKMD-----KSSVHDVVLVGGSTRIPKVQQLLQDFFNGKE 364 (647)
Q Consensus 298 ----d~~~~itr~~--fe~~~~~~~~~~~~~--i~~~l~~~~~~-----~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~ 364 (647)
+.-..| +.+ +|+ ++-+-+++.+. +.++|+..+.. ..+|..|+|+||+|.++.+.++.++.|...+
T Consensus 501 ~~~~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~ 578 (607)
T 1nbw_A 501 YIKEGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYG 578 (607)
T ss_dssp EEETTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTTT
T ss_pred cccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcCC
Confidence 112245 555 666 55444444443 34557776543 3457999999999999999999999994312
Q ss_pred c-------cCCCCchhhHHhHHHHHH
Q 006381 365 L-------CKSINPDEAVAYGAAVQA 383 (647)
Q Consensus 365 v-------~~~~~p~~ava~GAa~~a 383 (647)
+ ...-.|..|+|.|.+++.
T Consensus 579 VRiGrP~~~g~~gP~fAtAvGLlly~ 604 (607)
T 1nbw_A 579 VVAGQGNIRGTEGPRNAVATGLLLAG 604 (607)
T ss_dssp CEEEECCGGGTSCSCCHHHHHHHHHH
T ss_pred eEEecCCccccCCchHHHHHHHHHhh
Confidence 2 224589999999999864
No 38
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.77 E-value=3.3e-07 Score=91.57 Aligned_cols=74 Identities=24% Similarity=0.220 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHHHHHHHHc
Q 006381 309 EELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILS 387 (647)
Q Consensus 309 e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~~~ 387 (647)
++++..+++.+...+.+.++..+. .+.|+++||.+++|.+++.+.+.+ +.++..+.+++.+.|+|||++|....
T Consensus 185 ~di~~av~e~Va~~i~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~l-g~~v~~p~~~~~~~AlGAAl~A~~~~ 258 (270)
T 1hux_A 185 IDIIAGIHRSVASRVIGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGL-GVEIKTSPLAQYNGALGAALYAYKKA 258 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHH-CSCEECCGGGGGHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHH-CCCeEeCCCcchHhHHHHHHHHHHhh
Confidence 344445555555555455543221 378999999999999999999999 67888888888899999999997643
No 39
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=98.28 E-value=4.5e-05 Score=75.89 Aligned_cols=47 Identities=17% Similarity=0.206 Sum_probs=41.3
Q ss_pred CCeEEEEcC-CCCcHHHHHHHHhhh--CCccccCCCCchhhHHhHHHHHH
Q 006381 337 VHDVVLVGG-STRIPKVQQLLQDFF--NGKELCKSINPDEAVAYGAAVQA 383 (647)
Q Consensus 337 i~~ViLvGG-~s~~p~v~~~l~~~f--~~~~v~~~~~p~~ava~GAa~~a 383 (647)
++.|+++|| .+..|.+++.+.+.+ .+.++..+.+|..+.|+|||+.+
T Consensus 237 i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlGAaL~~ 286 (287)
T 2ews_A 237 TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIGALYLE 286 (287)
T ss_dssp CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHHHHHTC
T ss_pred CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHHHHHhC
Confidence 567999999 899999999999874 46788889999999999999863
No 40
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=97.92 E-value=1.9e-05 Score=85.93 Aligned_cols=123 Identities=17% Similarity=0.269 Sum_probs=88.5
Q ss_pred CcEEEEeCCCCCHHHHHHHHHHH-HHcCCceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEEEEeCCe
Q 006381 144 KNAVVTVPAYFNDSQRQATKDAG-VIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGI 222 (647)
Q Consensus 144 ~~~ViTVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~ 222 (647)
..+++|.|..++...|+.|.+.+ +..|++.+.++.+|.||+++++. ..+-||+|+|+|+|+++.+. .|.
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl--------~ttGLVVDiG~g~T~VvPV~--eG~ 291 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI--------STSTCVVNIGAAETRIACVD--EGT 291 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC--------SSCEEEEEECSSCEEEEEEE--TTE
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC--------CCceEEEcCCCceEEEEEEe--CCE
Confidence 46999999999999999998876 56999999999999999988764 23569999999999999873 331
Q ss_pred EEEEEeeCCCCCChHHHHHHHHHHHHHHHHhhccC-CCCCCHHHHHHHHHHHHHHHHHcCCC
Q 006381 223 FEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKK-DISGNPRALRRLRTSCERAKRTLSST 283 (647)
Q Consensus 223 ~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~-~~~~~~~~~~~L~~~~e~~K~~Ls~~ 283 (647)
. +........+||+++|..|.++|..+ .+.. +...+... =...++.+|+.++.-
T Consensus 292 v-l~~ai~rL~iGG~dLT~yL~kLL~~r---gypy~~~~f~t~~---e~eiVrdIKEk~CyV 346 (655)
T 4am6_A 292 V-LEHSAITLDYGGDDITRLFALFLLQS---DFPLQDWKIDSKH---GWLLAERLKKNFTTF 346 (655)
T ss_dssp E-CGGGCEEESCCHHHHHHHHHHHHHHT---TCSCCSCCTTSHH---HHHHHHHHHHHHCCC
T ss_pred E-EhhheeeecchHHHHHHHHHHHHHHc---CCCccccCCCCcc---hHHHHHHHHHheEEE
Confidence 1 11111225799999999999998653 1110 11111111 135688899998766
No 41
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=97.18 E-value=0.0085 Score=61.18 Aligned_cols=70 Identities=16% Similarity=0.060 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHHHHHH----HHcCCCCCCCCeEEEEcC-CCCcHHHHHHHHhhh-----CCccccCCCCchhhHHhH
Q 006381 309 EELNMDLFRKCMEPVEKCL----RDAKMDKSSVHDVVLVGG-STRIPKVQQLLQDFF-----NGKELCKSINPDEAVAYG 378 (647)
Q Consensus 309 e~~~~~~~~~~~~~i~~~l----~~~~~~~~~i~~ViLvGG-~s~~p~v~~~l~~~f-----~~~~v~~~~~p~~ava~G 378 (647)
|+++..++..+...|-... +..+ ++.|+++|| .+..|.+++.|++.+ ++.++..+.+|..+-|+|
T Consensus 279 eDIa~gll~sVa~~I~~lA~l~A~~~~-----i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlG 353 (360)
T 2i7n_A 279 EDLARATLVTITNNIGSIARMCALNEN-----IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVG 353 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT-----CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHH
Confidence 4555555555555443332 3333 457999999 899999999999986 246777888999999999
Q ss_pred HHHHH
Q 006381 379 AAVQA 383 (647)
Q Consensus 379 Aa~~a 383 (647)
||+.+
T Consensus 354 AaL~~ 358 (360)
T 2i7n_A 354 ALLEL 358 (360)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99975
No 42
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=97.05 E-value=0.0035 Score=63.50 Aligned_cols=78 Identities=15% Similarity=0.109 Sum_probs=52.1
Q ss_pred HHHHHHHHHHcCCceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEEEEeCCeEEEEEeeCCCCCChHH
Q 006381 159 RQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 238 (647)
Q Consensus 159 r~~l~~Aa~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~ 238 (647)
...+..+-+..|+++..+-.|.+|...+.+...... .....+|+|+|||+|.+++++ ++.+. .....++|+..
T Consensus 100 ~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~--~~~~~lvvDIGGGStEl~~~~--~~~~~---~~~Sl~~G~v~ 172 (315)
T 1t6c_A 100 EEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLK--PEGEVCVVDQGGGSTEYVFGK--GYKVR---EVISLPIGIVN 172 (315)
T ss_dssp HHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTC--CCSEEEEEEEETTEEEEEEEE--TTEEE---EEEEECCCHHH
T ss_pred HHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcc--cCCCEEEEEeCCCcEEEEEEe--CCcee---eEEEEeccHHH
Confidence 344455555789987766677777655544433321 245699999999999999975 44332 23346899988
Q ss_pred HHHHH
Q 006381 239 FDNRM 243 (647)
Q Consensus 239 ~d~~l 243 (647)
+.+.+
T Consensus 173 l~e~~ 177 (315)
T 1t6c_A 173 LTETF 177 (315)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87775
No 43
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=97.03 E-value=0.021 Score=57.98 Aligned_cols=44 Identities=25% Similarity=0.333 Sum_probs=29.4
Q ss_pred cCCceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEE
Q 006381 169 AGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLL 216 (647)
Q Consensus 169 AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~ 216 (647)
.|++ +.+.|+..|+|++-...... ...++++++-+|.| +-..++
T Consensus 96 ~~~p-v~v~NDa~aaal~E~~~g~~--~~~~~~~~l~~GtG-iG~gii 139 (321)
T 3vgl_A 96 VGLP-VVVENDANAAAWGEYRFGAG--QGHDDVICITLGTG-LGGGII 139 (321)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTT--TTCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEEehhhhHHHHHHHhCCC--CCCCCEEEEEeCcc-eEEEEE
Confidence 3775 68999999999874332211 23467888889887 555554
No 44
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=96.79 E-value=0.27 Score=49.87 Aligned_cols=66 Identities=17% Similarity=0.223 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhC--CccccCCC---CchhhHHhHHHHHHHHHc
Q 006381 317 RKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFN--GKELCKSI---NPDEAVAYGAAVQAAILS 387 (647)
Q Consensus 317 ~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~--~~~v~~~~---~p~~ava~GAa~~a~~~~ 387 (647)
+.+.+.+.++.+..+ ++.|+|+||.+....+++.|.+.+. +.++..+. -.|.++++|+|.+.....
T Consensus 230 ~~l~~~~~~~~~~~~-----~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~ 300 (330)
T 2ivn_A 230 AALVEVTERAVAHTE-----KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYKA 300 (330)
T ss_dssp HHHHHHHHHHHHHHC-----CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhC-----CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHHhc
Confidence 334444444444433 5799999999999999999998762 34454443 335688999887654433
No 45
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=96.73 E-value=0.071 Score=54.06 Aligned_cols=48 Identities=19% Similarity=0.152 Sum_probs=33.8
Q ss_pred CCeEEEEcCCCCc-HHHHHHHHhhhC---------CccccCCCCchhhHHhHHHHHHH
Q 006381 337 VHDVVLVGGSTRI-PKVQQLLQDFFN---------GKELCKSINPDEAVAYGAAVQAA 384 (647)
Q Consensus 337 i~~ViLvGG~s~~-p~v~~~l~~~f~---------~~~v~~~~~p~~ava~GAa~~a~ 384 (647)
++.|+|.||.++. +.+.+.|++.+. ..++....-.+.+.++|||.++.
T Consensus 261 P~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~~ 318 (321)
T 3r8e_A 261 LNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLIM 318 (321)
T ss_dssp CCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHHH
T ss_pred CCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHHH
Confidence 5789999999986 666666555441 22455555667899999998764
No 46
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=96.61 E-value=0.29 Score=49.62 Aligned_cols=47 Identities=21% Similarity=0.209 Sum_probs=33.2
Q ss_pred CCeEEEEcCCCCcHHHHHHHHhhhCC--------ccccCCCCchhhHHhHHHHHH
Q 006381 337 VHDVVLVGGSTRIPKVQQLLQDFFNG--------KELCKSINPDEAVAYGAAVQA 383 (647)
Q Consensus 337 i~~ViLvGG~s~~p~v~~~l~~~f~~--------~~v~~~~~p~~ava~GAa~~a 383 (647)
++.|+|.||.+..+.+.+.|++.+.. .++....-.+.+.++|||.++
T Consensus 270 p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 270 PHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp CSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred CCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 57899999999888777777776621 123333345678999999764
No 47
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=96.60 E-value=0.36 Score=48.28 Aligned_cols=48 Identities=27% Similarity=0.207 Sum_probs=31.7
Q ss_pred CCeEEEEcCCC-Cc-HHHHHHHHhhhC-------CccccCCCCchhhHHhHHHHHHH
Q 006381 337 VHDVVLVGGST-RI-PKVQQLLQDFFN-------GKELCKSINPDEAVAYGAAVQAA 384 (647)
Q Consensus 337 i~~ViLvGG~s-~~-p~v~~~l~~~f~-------~~~v~~~~~p~~ava~GAa~~a~ 384 (647)
++.|+|.||.+ .. |.+.+.|++.+. ..++....-.+.+.++|||.++.
T Consensus 238 p~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~~ 294 (302)
T 3vov_A 238 PGVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTAY 294 (302)
T ss_dssp CSEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHHH
T ss_pred CCEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHHH
Confidence 57899999988 54 656555555441 11233444567799999998875
No 48
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=96.56 E-value=0.005 Score=67.76 Aligned_cols=85 Identities=14% Similarity=0.188 Sum_probs=62.5
Q ss_pred eecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHHH
Q 006381 302 PITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAV 381 (647)
Q Consensus 302 ~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~ 381 (647)
.-+|.++-.++.-+++.+.-.++..++........++.|.++||.++++.+.+.+.+.| +.+|.++ ...++.|+|||+
T Consensus 408 ~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~~~~i~~~GG~aks~~~~Qi~ADv~-g~pV~~~-~~~e~~alGAA~ 485 (554)
T 3l0q_A 408 STTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANAT-GCAMLLP-EESEAMLLGSAM 485 (554)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGGGGCHHHHHHHHHHH-CCEEEEE-SCSCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccCHHHHHHHHHhh-CCeEEec-CCCcchHHHHHH
Confidence 45788875545556666655555544433222345889999999999999999999999 6787664 457899999999
Q ss_pred HHHHHcC
Q 006381 382 QAAILSG 388 (647)
Q Consensus 382 ~a~~~~~ 388 (647)
.|+.-.+
T Consensus 486 lA~~a~G 492 (554)
T 3l0q_A 486 MGTVAAG 492 (554)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 9987654
No 49
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=96.50 E-value=0.45 Score=47.42 Aligned_cols=50 Identities=16% Similarity=0.228 Sum_probs=38.4
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHHHHHHHH
Q 006381 336 SVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAIL 386 (647)
Q Consensus 336 ~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~~ 386 (647)
+++.|+|.||.+..+.+.+.+++.++..++..+. .+.+.+.||+.++...
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~~ 288 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYKE 288 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHHh
Confidence 3578999999987788888888887544555555 6678999999987643
No 50
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=96.45 E-value=0.005 Score=66.59 Aligned_cols=82 Identities=21% Similarity=0.195 Sum_probs=56.9
Q ss_pred ecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHHHH
Q 006381 303 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQ 382 (647)
Q Consensus 303 itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~ 382 (647)
.++.++ ++-+++.+.-.++..++........++.|.++||.++++.+.+.+.+.+ +.++..+..++.+.|+|||+.
T Consensus 356 ~~~~~~---~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~~~~e~~~alGAA~l 431 (484)
T 2itm_A 356 HGPNEL---ARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADIS-GQQLDYRTGGDVGPALGAARL 431 (484)
T ss_dssp CCHHHH---HHHHHHHHHHHHHHHHHHHHTTTCCCSCEEEESGGGCCHHHHHHHHHHH-CCCEEEESCTTSCHHHHHHHH
T ss_pred CCHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEeccccCHHHHHHHHHHh-CCeEEeCCCCCcccHHHHHHH
Confidence 356554 3444444444444444433222235788999999999999999999999 788877655554699999999
Q ss_pred HHHHcC
Q 006381 383 AAILSG 388 (647)
Q Consensus 383 a~~~~~ 388 (647)
|+.-.+
T Consensus 432 A~~~~g 437 (484)
T 2itm_A 432 AQIAAN 437 (484)
T ss_dssp HHHHHC
T ss_pred HHHHcC
Confidence 987654
No 51
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=96.43 E-value=0.0072 Score=66.20 Aligned_cols=77 Identities=14% Similarity=0.117 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHHHHHHHHc
Q 006381 309 EELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILS 387 (647)
Q Consensus 309 e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~~~ 387 (647)
..+++-+++.+.-.++..++..+.....++.|.++||.++++++.+.+.+.| +.+|.++ .+.++.|+|||+.|+.-.
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~ 483 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVF-DAPVYVI-DTANSACVGSAYRAFHGL 483 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHH-TSCEEEC-CCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHh-CCceEec-CCCCchHHHHHHHHHHHh
Confidence 4445556666666666666665554456789999999999999999999999 6777654 567899999999998654
No 52
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=96.32 E-value=0.0087 Score=64.92 Aligned_cols=79 Identities=15% Similarity=0.196 Sum_probs=58.4
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHHHHH
Q 006381 304 TRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQA 383 (647)
Q Consensus 304 tr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a 383 (647)
++.++ ++-+++.+.-.++..++...... .++.|.++||.++++.+.+.+.+.+ +.++.++ .+.++.|+|||+.|
T Consensus 365 ~~~~l---~rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~lA 438 (497)
T 2zf5_O 365 GREHL---ARATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADIL-NRKVIRP-VVKETTALGAAYLA 438 (497)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhc-CCeEEEc-CCCcchHHHHHHHH
Confidence 55544 44455555555555555543333 6789999999999999999999999 6787654 45669999999999
Q ss_pred HHHcC
Q 006381 384 AILSG 388 (647)
Q Consensus 384 ~~~~~ 388 (647)
+.-.+
T Consensus 439 ~~~~g 443 (497)
T 2zf5_O 439 GLAVD 443 (497)
T ss_dssp HHHTT
T ss_pred HHHhC
Confidence 87654
No 53
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=96.29 E-value=0.0083 Score=65.27 Aligned_cols=79 Identities=22% Similarity=0.223 Sum_probs=58.1
Q ss_pred ecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhCCccc-cCCCCchhhHHhHHHH
Q 006381 303 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKEL-CKSINPDEAVAYGAAV 381 (647)
Q Consensus 303 itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v-~~~~~p~~ava~GAa~ 381 (647)
-+|.++ ++-+++.+.-.++..++.... .. ++.|.++||+++++.+.+.+.+.| +.+| .. ..+.++.|+|||+
T Consensus 374 ~~~~~l---~RAvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~~e~~alGaA~ 446 (511)
T 3hz6_A 374 TTRAQI---LLAVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNL-NVSLLVK-PDAHLHPLRGLAA 446 (511)
T ss_dssp CCHHHH---HHHHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHH-TCEEEEC-CCGGGHHHHHHHH
T ss_pred CCHHHH---HHHHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHH-CCeeEEe-cCCCCchHHHHHH
Confidence 356555 444455555545554444332 33 789999999999999999999999 6787 54 4688999999999
Q ss_pred HHHHHcC
Q 006381 382 QAAILSG 388 (647)
Q Consensus 382 ~a~~~~~ 388 (647)
.|+.-.+
T Consensus 447 lA~~a~G 453 (511)
T 3hz6_A 447 LAAVELE 453 (511)
T ss_dssp HHHHHTT
T ss_pred HHHHHhC
Confidence 9987665
No 54
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=96.26 E-value=0.0088 Score=64.95 Aligned_cols=81 Identities=11% Similarity=0.103 Sum_probs=56.4
Q ss_pred ecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHHHH
Q 006381 303 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQ 382 (647)
Q Consensus 303 itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~ 382 (647)
-+|.++ ++-+++.+.-.++..++........++.|.++||.++++.+.+.+.+.| +.+|..+ .+.++.|+|||+.
T Consensus 363 ~~~~~l---~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~l 437 (504)
T 3ll3_A 363 HQKPEM---ARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKSDFVRQLCANIF-NVPIVTM-KEQQSGTLAAMFL 437 (504)
T ss_dssp CCHHHH---HHHHHHHHHHHHHHHHHHHHTTSCCCSEEEEESGGGCSHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHH
T ss_pred CCHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCchhcCHHHHHHHHHhh-CCeEEec-CCCCchhHHHHHH
Confidence 356555 3444444444444433332111235889999999999999999999999 6787654 4677999999999
Q ss_pred HHHHcC
Q 006381 383 AAILSG 388 (647)
Q Consensus 383 a~~~~~ 388 (647)
|+.-.+
T Consensus 438 A~~a~G 443 (504)
T 3ll3_A 438 ARQALG 443 (504)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 987654
No 55
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=96.24 E-value=1.2 Score=45.18 Aligned_cols=61 Identities=5% Similarity=-0.012 Sum_probs=40.9
Q ss_pred CCCcEEEEeCCCCCHHHHHHHHHHHHHc-C--CceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCce
Q 006381 142 TVKNAVVTVPAYFNDSQRQATKDAGVIA-G--LNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTF 211 (647)
Q Consensus 142 ~~~~~ViTVPa~~~~~qr~~l~~Aa~~A-G--l~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~ 211 (647)
.+..+.|++|...+......+++..+.. | ...+.+.|+..|||+++ . . ...+++=+|.|.-
T Consensus 70 ~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~-~--~------~~~v~v~~GTGig 133 (347)
T 2ch5_A 70 PLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA-T--P------DGGVVLISGTGSN 133 (347)
T ss_dssp CBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH-C--S------SCEEEEEESSSEE
T ss_pred ceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh-C--C------CCcEEEEEcCCce
Confidence 4678999999999876655666655543 3 13578999999999873 2 1 2345555566543
No 56
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=96.21 E-value=0.0068 Score=65.97 Aligned_cols=77 Identities=25% Similarity=0.393 Sum_probs=54.8
Q ss_pred cHHHHHHHHHHHHHHHHHHHHH---HHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHH
Q 006381 304 TRARFEELNMDLFRKCMEPVEK---CLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAA 380 (647)
Q Consensus 304 tr~~fe~~~~~~~~~~~~~i~~---~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa 380 (647)
+|.++- +-+++.+.-.++. .|++.+. .++.|.++||.+++|.+.+.+.+.| +.+|..+ .+.++.|+|||
T Consensus 395 ~~~~l~---RAvlEgia~~~r~~l~~l~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA 466 (515)
T 3i8b_A 395 TRENLA---RAFVEGLLCSQRDCLELIRSLGA---SITRILLIGGGAKSEAIRTLAPSIL-GMDVTRP-ATDEYVAIGAA 466 (515)
T ss_dssp SHHHHH---HHHHHHHHHHHHHHHHHHHHTTC---CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-CCCCHHHHHHH
T ss_pred CHHHHH---HHHHHHHHHHHHHHHHHHHHcCC---CCCEEEEECchhcCHHHHHHHHHHh-CCceEec-CCcccHHHHHH
Confidence 565543 3344444333333 3444443 4789999999999999999999999 6777654 56779999999
Q ss_pred HHHHHHcC
Q 006381 381 VQAAILSG 388 (647)
Q Consensus 381 ~~a~~~~~ 388 (647)
+.|+.-.+
T Consensus 467 ~lA~~a~G 474 (515)
T 3i8b_A 467 RQAAWVLS 474 (515)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHcC
Confidence 99986654
No 57
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=95.92 E-value=0.012 Score=64.00 Aligned_cols=51 Identities=24% Similarity=0.351 Sum_probs=44.3
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHHHHHHHHcC
Q 006381 336 SVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSG 388 (647)
Q Consensus 336 ~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~~~~ 388 (647)
.++.|.++||.++++.+.+.+.+.| +.+|..+ .+.++.|+|||+.|+.-.+
T Consensus 404 ~~~~i~~~GG~aks~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~la~~a~G 454 (501)
T 3g25_A 404 DVQSLRVDGGAVKNNFIMQFQADIV-NTSVERP-EIQETTALGAAFLAGLAVG 454 (501)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHHHHHHTT
T ss_pred CCcEEEEecchhcCHHHHHHHHHHh-CCceEec-CCCcchHHHHHHHHHHHhC
Confidence 4789999999999999999999999 6777554 5678999999999987665
No 58
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=95.92 E-value=0.27 Score=49.72 Aligned_cols=48 Identities=23% Similarity=0.252 Sum_probs=32.9
Q ss_pred CCeEEEEcCCCC-cHHHHHHHHhhhC---------CccccCCCCchhhHHhHHHHHHH
Q 006381 337 VHDVVLVGGSTR-IPKVQQLLQDFFN---------GKELCKSINPDEAVAYGAAVQAA 384 (647)
Q Consensus 337 i~~ViLvGG~s~-~p~v~~~l~~~f~---------~~~v~~~~~p~~ava~GAa~~a~ 384 (647)
++.|+|.||.+. .|.+.+.+++.+. ..++......+.+.++|||.++.
T Consensus 263 p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~ 320 (326)
T 2qm1_A 263 PDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLAL 320 (326)
T ss_dssp CSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGG
T ss_pred CCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHH
Confidence 568999999986 5777777766552 12333333566789999998764
No 59
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=95.90 E-value=0.06 Score=54.40 Aligned_cols=78 Identities=17% Similarity=0.247 Sum_probs=48.4
Q ss_pred HHHHHHHHHcCCceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEEEEeCCeEEEEEeeCCCCCChHHH
Q 006381 160 QATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDF 239 (647)
Q Consensus 160 ~~l~~Aa~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~ 239 (647)
..+.++-+..|+++-.+-.|-+|.-.+.+...... ......+|+|+|||+|.+++++ ++.+ ......++|.-.+
T Consensus 93 ~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~-~~~~~~lviDIGGGStEl~~~~--~~~~---~~~~Sl~lG~vrl 166 (315)
T 3mdq_A 93 VLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVP-MEDHISLAMDIGGGSVEFIIGN--KNEI---LWKQSFEIGGQRL 166 (315)
T ss_dssp HHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSC-CTTCCEEEEEECSSCEEEEEEC--SSCE---EEEEEESCCHHHH
T ss_pred HHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCC-CCCCCEEEEEeCCCceEEEEEE--CCeE---eeeEEEechhhHH
Confidence 44455556689987555556666544444433221 1245799999999999999996 3322 2222357888777
Q ss_pred HHHH
Q 006381 240 DNRM 243 (647)
Q Consensus 240 d~~l 243 (647)
.+.+
T Consensus 167 ~e~f 170 (315)
T 3mdq_A 167 IDRF 170 (315)
T ss_dssp HHHS
T ss_pred HHHh
Confidence 6654
No 60
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=95.84 E-value=0.01 Score=64.47 Aligned_cols=51 Identities=25% Similarity=0.205 Sum_probs=43.7
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHHHHHHHHcC
Q 006381 336 SVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSG 388 (647)
Q Consensus 336 ~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~~~~ 388 (647)
.++.|.++||.++++.+.+.+.+.| +.+|..+.. .++.|+|||+.|+.-.+
T Consensus 400 ~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~~-~e~~alGaA~lA~~a~G 450 (508)
T 3ifr_A 400 APQRFFASDGGTRSRVWMGIMADVL-QRPVQLLAN-PLGSAVGAAWVAAIGGG 450 (508)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEEEC-CSTHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCcccCHHHHHHHHHHh-CCeEEecCC-CCchHHHHHHHHHHHhC
Confidence 4789999999999999999999999 688866543 56899999999987664
No 61
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=95.84 E-value=0.011 Score=65.26 Aligned_cols=81 Identities=17% Similarity=0.215 Sum_probs=57.0
Q ss_pred ecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCC-CcHHHHHHHHhhhCCccccCCCCchhhHHhHHHH
Q 006381 303 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGST-RIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAV 381 (647)
Q Consensus 303 itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~ 381 (647)
-+|.+| ++-+++.+.-.++..++........++.|.++||.+ +++.+.+.+.+.| +.+|.++ .+.++.|+|||+
T Consensus 409 ~t~~~l---~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~ks~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~ 483 (572)
T 3jvp_A 409 TKPEEI---YRALLEATAFGTRAIVDAFHGRGVEVHELYACGGLPQKNHLLMQIFADVT-NREIKVA-ASKQTPALGAAM 483 (572)
T ss_dssp CCHHHH---HHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEESSHHHHCHHHHHHHHHHH-TSCEEEB-CCSSHHHHHHHH
T ss_pred CCHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCcCEEEEEcCchhhCHHHHHHHHHHH-CCeeEec-CCCccHHHHHHH
Confidence 356655 444444444444443333221233578999999999 9999999999999 6777554 567899999999
Q ss_pred HHHHHcC
Q 006381 382 QAAILSG 388 (647)
Q Consensus 382 ~a~~~~~ 388 (647)
.|+.-.+
T Consensus 484 lA~~a~G 490 (572)
T 3jvp_A 484 FASVAAG 490 (572)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 9987654
No 62
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.81 E-value=0.019 Score=62.61 Aligned_cols=51 Identities=25% Similarity=0.375 Sum_probs=44.6
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHHHHHHHHcC
Q 006381 336 SVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSG 388 (647)
Q Consensus 336 ~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~~~~ 388 (647)
.++.|.++||+++++++.+.+.+.| +.+|.++ ...|+.|+|||+.|+.-.|
T Consensus 402 ~~~~i~v~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~E~~alGAA~lA~~a~G 452 (526)
T 3ezw_A 402 RLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAYLAGLAVG 452 (526)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECchhhCHHHHHHHHHHH-CCEEEeC-CCCchHHHHHHHHHHHHhC
Confidence 4789999999999999999999999 7888654 4568999999999987765
No 63
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=95.81 E-value=0.02 Score=61.96 Aligned_cols=80 Identities=18% Similarity=0.209 Sum_probs=55.5
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCCCCCCeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHHHH
Q 006381 304 TRARFEELNMDLFRKCMEPVEKCLRDAK-MDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQ 382 (647)
Q Consensus 304 tr~~fe~~~~~~~~~~~~~i~~~l~~~~-~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~ 382 (647)
++.++ ++-+++.+.-.++..++... .....++.|.++||.++++.+.+.+.+.+ +.+|.++ .+.++.|+|||+.
T Consensus 368 ~~~~~---~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~a~n~~~~q~~Adv~-g~pV~~~-~~~e~~alGaA~l 442 (495)
T 2dpn_A 368 SRAHL---ARAALEGVAFQVRDVVLAMEEEAGVRLKVLKADGGMAQNRLFLKIQADLL-GVPVAVP-EVTETTALGAALM 442 (495)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTTSCCCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccccCHHHHHHHHHHh-CCeeEec-CCcccHHHHHHHH
Confidence 55554 33444444444444444321 11234688999999999999999999999 6787654 4567999999999
Q ss_pred HHHHcC
Q 006381 383 AAILSG 388 (647)
Q Consensus 383 a~~~~~ 388 (647)
|+.-.+
T Consensus 443 a~~a~G 448 (495)
T 2dpn_A 443 AGVGAG 448 (495)
T ss_dssp HHHHHT
T ss_pred HHhhcC
Confidence 986654
No 64
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=95.77 E-value=0.0097 Score=64.87 Aligned_cols=51 Identities=22% Similarity=0.141 Sum_probs=43.1
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHHHHHHHHcC
Q 006381 336 SVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSG 388 (647)
Q Consensus 336 ~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~~~~ 388 (647)
.++.|.++||.+++|.+.+.+.+.+ +.+|.++ .+.++.|+|||+.|+.-.+
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA~lA~~a~G 475 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLL-DAPVDRP-VILETTALGVAWLAGSRAG 475 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCCCHHHHHHHHHHHHHHT
T ss_pred CcceEEEeCccccCHHHHHHHHHHh-CCeEEec-CCCccHHHHHHHHHHHHcC
Confidence 4789999999999999999999999 6787654 5677999999999987665
No 65
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=95.74 E-value=0.013 Score=63.55 Aligned_cols=51 Identities=22% Similarity=0.283 Sum_probs=44.3
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHHHHHHHHcC
Q 006381 336 SVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSG 388 (647)
Q Consensus 336 ~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~~~~ 388 (647)
.++.|.++||.++++.+.+.+.+.| +.+|.+ ..+.++.|+|||+.|+.-.+
T Consensus 403 ~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~-~~~~e~~alGaA~lA~~a~G 453 (506)
T 3h3n_X 403 DIPLLKVDGGAAKNDLLMQFQADIL-DIDVQR-AANLETTALGAAYLAGLAVG 453 (506)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHH-TSEEEE-CSSSCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEecccccCHHHHHHHHHHh-CCeEEe-cCCCcchhHHHHHHHHHHhC
Confidence 4789999999999999999999999 677755 45678999999999987665
No 66
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.70 E-value=0.013 Score=63.83 Aligned_cols=51 Identities=25% Similarity=0.375 Sum_probs=44.1
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHHHHHHHHcC
Q 006381 336 SVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSG 388 (647)
Q Consensus 336 ~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~~~~ 388 (647)
.++.|.++||.++++.+.+.+.+.+ +.+|.++ .+.++.|+|||+.|+.-.+
T Consensus 401 ~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G 451 (510)
T 2p3r_A 401 RLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAYLAGLAVG 451 (510)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHHHHHHHT
T ss_pred CccEEEEeCchhcCHHHHHHHHHHh-CCceEec-CCCCcHHHHHHHHHHHHhC
Confidence 4789999999999999999999999 6777654 4677999999999987665
No 67
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=95.46 E-value=0.018 Score=62.42 Aligned_cols=51 Identities=25% Similarity=0.369 Sum_probs=43.9
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHHHHHHHHcC
Q 006381 336 SVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSG 388 (647)
Q Consensus 336 ~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~~~~ 388 (647)
.++.|.++||.++++.+.+.+.+.+ +.+|.++ .+.++.|+|||+.|+.-.+
T Consensus 403 ~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~lA~~~~G 453 (504)
T 2d4w_A 403 DLTELRVDGGMVANELLMQFQADQL-GVDVVRP-KVAETTALGAAYAAGIAVG 453 (504)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHHT
T ss_pred CcceEEEeCCcccCHHHHHHHHHHh-CCeEEeC-CCCcchHHHHHHHHHhhcC
Confidence 3689999999999999999999999 6787654 5577999999999987654
No 68
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=95.31 E-value=0.023 Score=61.66 Aligned_cols=50 Identities=26% Similarity=0.267 Sum_probs=43.1
Q ss_pred C-CeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHHHHHHHHcC
Q 006381 337 V-HDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSG 388 (647)
Q Consensus 337 i-~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~~~~ 388 (647)
+ +.|.++||.++++.+.+.+.+.+ +.+|.++ .+.++.|+|||+.|+.-.+
T Consensus 407 ~~~~i~~~GG~a~s~~~~Q~~Adv~-g~pV~~~-~~~e~~alGaA~la~~~~G 457 (503)
T 2w40_A 407 MLHVLRCDGGMTKNKPFMQFNSDII-NTKIEVS-KYKEVTSLGAAVLAGLEVK 457 (503)
T ss_dssp CCSCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHTT
T ss_pred ccceEEEeCccccCHHHHHHHHHHH-CCeEEec-CCCcchHHHHHHHHHHHhC
Confidence 6 78999999999999999999999 6777654 5567999999999987654
No 69
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=95.27 E-value=0.069 Score=54.59 Aligned_cols=81 Identities=17% Similarity=0.151 Sum_probs=46.7
Q ss_pred HHHHHHHHHcCCceeEecChhHHHHhcccccccccC-CCCeeEEEEEeCCCceEEEEEEE--eC--CeEEEEEeeCCCCC
Q 006381 160 QATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATS-VGEKNVLIFDLGGGTFDVSLLTI--EE--GIFEVKATAGDTHL 234 (647)
Q Consensus 160 ~~l~~Aa~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~-~~~~~vlV~D~GggT~dvsv~~~--~~--~~~~v~~~~~~~~l 234 (647)
..+.++-+..|+++-.+=-|-+|...+.+....... ......+|+|+|||+|+++++.- .. +.+ ......++
T Consensus 106 ~fl~~v~~~tGi~ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~---~~~~Slpl 182 (343)
T 3cer_A 106 EFEDEIERILGVRPEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQV---QGAFSMNI 182 (343)
T ss_dssp HHHHHHHHHHSSCCEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSC---SEEEEESC
T ss_pred HHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCccccc---ceeEEEeh
Confidence 444555556799764444444454333333222211 12356999999999999999854 22 111 11223579
Q ss_pred ChHHHHHHH
Q 006381 235 GGEDFDNRM 243 (647)
Q Consensus 235 GG~~~d~~l 243 (647)
|+..+.+.+
T Consensus 183 G~v~lt~~~ 191 (343)
T 3cer_A 183 GSVRMTERH 191 (343)
T ss_dssp CHHHHHHHT
T ss_pred hHHHHHHHh
Confidence 998888775
No 70
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=95.15 E-value=0.027 Score=60.84 Aligned_cols=48 Identities=21% Similarity=0.224 Sum_probs=40.2
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHHHHHHHH
Q 006381 336 SVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAIL 386 (647)
Q Consensus 336 ~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~~ 386 (647)
.++.|.++||.++++++.+.+.+.| +.+|.... .++.|+|||+.|..-
T Consensus 393 ~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~~--~e~~alGaa~~A~~a 440 (489)
T 2uyt_A 393 DFSQLHIVGGGCQNTLLNQLCADAC-GIRVIAGP--VEASTLGNIGIQLMT 440 (489)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEECC--TTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCChhhhHHHHHHHHHHH-CCeeecCC--ccHhHHHHHHHHHHH
Confidence 4789999999999999999999999 67886543 689999997766543
No 71
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=95.03 E-value=0.51 Score=49.36 Aligned_cols=50 Identities=8% Similarity=0.106 Sum_probs=32.0
Q ss_pred CCeEEEEcCCCCc-HHHHHHHHhhhC---------CccccCCCCchhhHHhHHHHHHHHH
Q 006381 337 VHDVVLVGGSTRI-PKVQQLLQDFFN---------GKELCKSINPDEAVAYGAAVQAAIL 386 (647)
Q Consensus 337 i~~ViLvGG~s~~-p~v~~~l~~~f~---------~~~v~~~~~p~~ava~GAa~~a~~~ 386 (647)
++.|+|.||.+.. +.+.+.+++.+. ..++......+.+.++|||+....+
T Consensus 335 P~~IvlgG~i~~~~~~l~~~i~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~~~~~~ 394 (406)
T 1z6r_A 335 PQKILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAALVKDAM 394 (406)
T ss_dssp CSEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCCCCTTTTHHHHHHHHT
T ss_pred CCEEEEeCccchhhHHHHHHHHHHHHHhcccccCCCcEEEEeCCCChHHHHHHHHHHHHH
Confidence 5789999998763 666666655441 1234444455678999998765443
No 72
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=94.94 E-value=0.069 Score=57.86 Aligned_cols=77 Identities=17% Similarity=0.201 Sum_probs=46.1
Q ss_pred HHHHHHHHHcCCceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEEEEeCCeEEEEEeeCCCCCChHHH
Q 006381 160 QATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDF 239 (647)
Q Consensus 160 ~~l~~Aa~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~ 239 (647)
..+.++-+..|+++-.+=.|-+|.-.+.+...... .....+|+|+|||+|.+++.+ ++.+. .....++|.-.+
T Consensus 100 ~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~--~~~~~lviDIGGGStEl~~~~--~~~~~---~~~Sl~lG~vrl 172 (513)
T 1u6z_A 100 DFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQP--EKGRKLVIDIGGGSTELVIGE--NFEPI---LVESRRMGCVSF 172 (513)
T ss_dssp HHHHHHTTTCSSCEEECCHHHHHHHHHHHHHHHSC--CCSCEEEEEECSSCEEEEEEE--TTEEE---EEEEESCCHHHH
T ss_pred HHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhcc--CCCCEEEEEECCCcEEEEEEe--CCeee---EEEEEeccHHHH
Confidence 33444445569876444444455444444433321 122699999999999999874 44332 122367999888
Q ss_pred HHHH
Q 006381 240 DNRM 243 (647)
Q Consensus 240 d~~l 243 (647)
.+.+
T Consensus 173 te~f 176 (513)
T 1u6z_A 173 AQLY 176 (513)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
No 73
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=94.68 E-value=1.3 Score=44.68 Aligned_cols=44 Identities=20% Similarity=0.222 Sum_probs=27.9
Q ss_pred cCCceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEE
Q 006381 169 AGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLL 216 (647)
Q Consensus 169 AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~ 216 (647)
.|++ +.+.|+..|||++-...... ...+.++++-+|.| +-.+++
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~~--~~~~~~v~l~~GtG-iG~giv 163 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDEF--TQYPLVMGLILGTG-VGGGLV 163 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTTG--GGCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecHHHHHHHHHHHhCcC--CCCCcEEEEEECCc-EEEEEE
Confidence 4665 68999999998864322111 12457888888887 444444
No 74
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=94.66 E-value=1.8 Score=44.65 Aligned_cols=48 Identities=19% Similarity=0.251 Sum_probs=31.8
Q ss_pred CCeEEEEcCCCCc-HHHHHHHHhhhC-------CccccCCCCchhhHHhHHHHHHH
Q 006381 337 VHDVVLVGGSTRI-PKVQQLLQDFFN-------GKELCKSINPDEAVAYGAAVQAA 384 (647)
Q Consensus 337 i~~ViLvGG~s~~-p~v~~~l~~~f~-------~~~v~~~~~p~~ava~GAa~~a~ 384 (647)
++.|+|.||.+.. |.+.+.+++.+. ..++....-.+.+.++|||.++.
T Consensus 315 P~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l~~ 370 (380)
T 2hoe_A 315 ISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHAL 370 (380)
T ss_dssp CCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHHH
T ss_pred CCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 5789999999864 666666665541 12233333455689999998764
No 75
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=94.12 E-value=1.1 Score=47.04 Aligned_cols=44 Identities=20% Similarity=0.305 Sum_probs=28.4
Q ss_pred cCCceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEE
Q 006381 169 AGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLL 216 (647)
Q Consensus 169 AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~ 216 (647)
.|++ +.+.|+..|||++-...... .....++++-+|.| +-..++
T Consensus 208 ~~~p-V~v~NDa~aaalaE~~~g~~--~~~~~~v~l~~GtG-iG~giv 251 (429)
T 1z05_A 208 TGLP-VFVANDTRAWALAEKLFGHS--QDVDNSVLISIHHG-LGAGIV 251 (429)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTT--TTCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCC--CCCCcEEEEEECCc-EEEEEE
Confidence 4775 68999999999875332211 13456788888887 444444
No 76
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=93.19 E-value=0.97 Score=44.14 Aligned_cols=48 Identities=19% Similarity=0.207 Sum_probs=30.4
Q ss_pred CCeEEEEcCCCCc-HHHHHHHHhhhCCccccCCCCchhhHHhHHHHHHHHHc
Q 006381 337 VHDVVLVGGSTRI-PKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILS 387 (647)
Q Consensus 337 i~~ViLvGG~s~~-p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~~~ 387 (647)
++.|+|.||.+.. +.+.+.++ ...++....-.+.+.++|||.++...+
T Consensus 215 P~~IvlgG~i~~~~~~~~~~~~---~~~~i~~s~l~~~a~~~GAa~l~~~~~ 263 (267)
T 1woq_A 215 PELFIVGGGISKRADEYLPNLR---LRTPIVPAVLRNEAGIVGAAIEIALQH 263 (267)
T ss_dssp CSEEEEESGGGGGGGGTGGGCC---CSSCEEECSCSTTHHHHHHHHHHHHHC
T ss_pred CCEEEEeChhhcccHHHHHhhc---cCceEEECCcCCcHHHHHHHHHHHhcc
Confidence 6789999998764 34433332 123444444456789999999875443
No 77
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=93.12 E-value=7.5 Score=39.04 Aligned_cols=49 Identities=31% Similarity=0.400 Sum_probs=30.6
Q ss_pred HHcCCceeEecChhHHHHhcccccc--------cccCCCCeeEEEEEeCCCceEEEEE
Q 006381 167 VIAGLNVMRIINEPTAAAIAYGLDK--------KATSVGEKNVLIFDLGGGTFDVSLL 216 (647)
Q Consensus 167 ~~AGl~~~~li~Ep~Aaa~~y~~~~--------~~~~~~~~~vlV~D~GggT~dvsv~ 216 (647)
+..|++.+.+.|+-.|+|++-.... .......+.++++-+|.|- -..++
T Consensus 99 ~~~~~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~~v~~GTGi-G~giv 155 (332)
T 1sz2_A 99 KNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGL-GVAHL 155 (332)
T ss_dssp HHHTCSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESSSE-EEEEE
T ss_pred HHhCCCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEEEEEcCccc-eEEEE
Confidence 3458877899999999998653321 0001234568888888873 34343
No 78
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=92.91 E-value=0.11 Score=55.80 Aligned_cols=71 Identities=8% Similarity=0.007 Sum_probs=52.5
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhh-hCCccccCCCCchhhHHhHHHHHHHH
Q 006381 309 EELNMDLFRK--CMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDF-FNGKELCKSINPDEAVAYGAAVQAAI 385 (647)
Q Consensus 309 e~~~~~~~~~--~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~-f~~~~v~~~~~p~~ava~GAa~~a~~ 385 (647)
..+.+-+++. +.-.++..++.... .+.|.++||++++|.+.+.+.+. | +.++.++. ..++.|+|||++|+.
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~~----~~~i~~~GG~a~s~~w~Qi~ADv~~-g~pV~~~~-~~e~~alGAA~lA~~ 435 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIGS----TGRILVEGRFAEADVFVRALASLRP-DCAVYTAN-AHNDVSFGALRLIDP 435 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTC----CSEEEEESGGGGCHHHHHHHHHHST-TSEEEEES-SCCCTTGGGHHHHCT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcC----CCeEEEeCCcccCHHHHHHHhhhcC-CCeEEEcC-CCchHHHHHHHHhCc
Confidence 4455555553 44455556655432 27899999999999999999999 9 68886654 466899999999874
No 79
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=92.65 E-value=8.6 Score=38.02 Aligned_cols=63 Identities=19% Similarity=0.142 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCCC--cHHHHHHHHhhhCCccccCCCCchhhHHhHHHHHHH
Q 006381 312 NMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTR--IPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAA 384 (647)
Q Consensus 312 ~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~--~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~ 384 (647)
+..++++....+-..+...-. . +++.|+|.||.+. .|++.+.+++.+ . .|+.+.+.||+++|.
T Consensus 228 A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i-----~---~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 228 ADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRL-----V---APQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHC-----C---CCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhc-----c---CCCCCHHHHHHHHHh
Confidence 445555655555555554432 2 5788999999864 466666666643 1 256778999998864
No 80
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=89.89 E-value=12 Score=39.34 Aligned_cols=290 Identities=15% Similarity=0.074 Sum_probs=0.0
Q ss_pred CCCCCCCEEEEecCccceEEEEEECCe-eEEEecCCCCcccceEEEEcCCceEecHHHHHHHhhCcCchHHhhHHhhCCC
Q 006381 2 AGKGEGPAIGIDLGTTYSCVGVWQHDR-VEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRR 80 (647)
Q Consensus 2 ~~~~~~~vvGID~GTt~s~va~~~~g~-~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~~lg~~ 80 (647)
.++....++|||||.||.+|+.++-+. -........+..+|+
T Consensus 63 ~G~E~G~~lalDlGGTn~Rv~~V~l~G~~~~~~i~~~~~~ip~------------------------------------- 105 (451)
T 1bdg_A 63 NGTETGNFLALDLGGTNYRVLSVTLEGKGKSPRIQERTYCIPA------------------------------------- 105 (451)
T ss_dssp CSCCCEEEEEEEESSSSEEEEEEEECC-CCCCEEEEEEECCCT-------------------------------------
T ss_pred CCCccceEEEEEeCCCeEEEEEEecCCCCcceEEEEEEEecCC-------------------------------------
Q ss_pred CCChhhhhcccCCCeEEEecCCCcceEEEEEcCceeEEeHHHHHHHHHHHHHHHHHHHh-CCCCCcEEEEeCC-------
Q 006381 81 FSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYL-GSTVKNAVVTVPA------- 152 (647)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~-~~~~~~~ViTVPa------- 152 (647)
....-+.+++...+...+.+.....- ......+=||.|-
T Consensus 106 ---------------------------------~~~~~~~~~lfd~Ia~~i~~~l~~~~~~~~~~~lG~tfsfPv~q~~~ 152 (451)
T 1bdg_A 106 ---------------------------------EKMSGSGTELFKYIAETLADFLENNGMKDKKFDLGFTFSFPCVQKGL 152 (451)
T ss_dssp ---------------------------------TTTTSBHHHHHHHHHHHHHHHHHHTTCCSSCEEEEEEECSCEEEETT
T ss_pred ---------------------------------cccCCCHHHHHHHHHHHHHHHHHhcCCCccccceEEEEeeEeccccC
Q ss_pred ------CC----------CHHHHHHHHHHHHHcCCce--eEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEE
Q 006381 153 ------YF----------NDSQRQATKDAGVIAGLNV--MRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVS 214 (647)
Q Consensus 153 ------~~----------~~~qr~~l~~Aa~~AGl~~--~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvs 214 (647)
.| ...-.+.+++|...-|+++ +.++|+..|++++..+.... +++-+=+|.|+=-..
T Consensus 153 ~~G~l~~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~~~------~~iglIlGTG~na~y 226 (451)
T 1bdg_A 153 THATLVRWTKGFSADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALEDPK------CAVGLIVGTGTNVAY 226 (451)
T ss_dssp TEEEECCCCTTCCCBTCTTSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTCTT------EEEEEEESSSEEEEE
T ss_pred CCeEEeccccccCCCCCCCCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccCCC------cEEEEEEeCCcceEE
Q ss_pred EEEEeC--------CeEEEEEeeCCCC--------------------------------CChHHHHHHHHHHHHHHHHhh
Q 006381 215 LLTIEE--------GIFEVKATAGDTH--------------------------------LGGEDFDNRMVNHFVQEFKRK 254 (647)
Q Consensus 215 v~~~~~--------~~~~v~~~~~~~~--------------------------------lGG~~~d~~l~~~l~~~~~~~ 254 (647)
+..... ..-.++...++.. ++|..+=+.+...+.+-....
T Consensus 227 ve~~~~i~~~~g~~~g~m~In~EwG~f~~~~~~~~p~t~~D~~lD~~s~~pg~q~~Ek~~SG~yLgel~R~~l~~~~~~~ 306 (451)
T 1bdg_A 227 IEDSSKVELMDGVKEPEVVINTEWGAFGEKGELDCWRTQFDKSMDIDSLHPGKQLYEKMVSGMYLGELVRHIIVYLVEQK 306 (451)
T ss_dssp EEETTTCGGGCSCSSSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSSSTTSCTTHHHHSHHHHHHHHHHHHHHHHHTT
T ss_pred EEcCccccCcCCCccCcEEEecCcccCCCcccccCCCCcchhhhhhcCCCCCcccchhhhhhhHHHHHHHHHHHHhhccc
Q ss_pred ----------ccCCCCCCHHHHHHH-------HHHHHHHHHH-cCCCC-cEEEEEccccCCceeEEeecHHHHHHHHHHH
Q 006381 255 ----------HKKDISGNPRALRRL-------RTSCERAKRT-LSSTA-QTTIEIDSLYEGIDFYSPITRARFEELNMDL 315 (647)
Q Consensus 255 ----------~~~~~~~~~~~~~~L-------~~~~e~~K~~-Ls~~~-~~~~~i~~~~~~~d~~~~itr~~fe~~~~~~ 315 (647)
.......+...+..+ +..++.+-.. +.... +.. .+.-+..++..+
T Consensus 307 ~lf~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~i~~~~~~~~~~~~~----------------d~~~~~~va~~V 370 (451)
T 1bdg_A 307 ILFRGDLPERLKVRNSLLTRYLTDVERDPAHLLYNTHYMLTDDLHVPVVEPI----------------DNRIVRYACEMV 370 (451)
T ss_dssp SSGGGCCCSGGGSTTCSCTTHHHHHTTCCTTCCHHHHHHHHHTSCCSSCCHH----------------HHHHHHHHHHHH
T ss_pred ccccccchHhhcCCCccchHHHhhhhccCccchHHHHHHHHHHhCCCCCCHH----------------HHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCC--CcHHHHHHHHhhh-----CCccccCCCCchhhHHhHHHHHHH
Q 006381 316 FRKCMEPVEKCLRDAKMDKSSVHDVVLVGGST--RIPKVQQLLQDFF-----NGKELCKSINPDEAVAYGAAVQAA 384 (647)
Q Consensus 316 ~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s--~~p~v~~~l~~~f-----~~~~v~~~~~p~~ava~GAa~~a~ 384 (647)
+++....+-..+...-.....-.-++.+||+- .-|.+++.+++.+ +..++... -+..+..+|||+.|+
T Consensus 371 ~~RaA~lla~~ia~i~~~~~~~~~~V~i~Ggv~~~~~~~~~~l~~~l~~~~~~~~~i~~~-l~~dgs~iGAAllA~ 445 (451)
T 1bdg_A 371 VKRAAYLAGAGIACILRRINRSEVTVGVDGSLYKFHPKFCERMTDMVDKLKPKNTRFCLR-LSEDGSGKGAAAIAA 445 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCSEEEEEEESHHHHHCTTHHHHHHHHHHHHSCTTCEEEEE-ECTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEEEeCchhcCchhHHHHHHHHHHHHhCCCCcEEEE-ECCCccHHHHHHHHH
No 81
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=88.42 E-value=1.3 Score=42.77 Aligned_cols=21 Identities=19% Similarity=0.287 Sum_probs=18.1
Q ss_pred CEEEEecCccceEEEEEECCe
Q 006381 8 PAIGIDLGTTYSCVGVWQHDR 28 (647)
Q Consensus 8 ~vvGID~GTt~s~va~~~~g~ 28 (647)
..+.||.|+|+++.++++++.
T Consensus 4 M~L~IDIGNT~ik~gl~~~~~ 24 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITEDGK 24 (249)
T ss_dssp EEEEEEECSSEEEEEEESSSS
T ss_pred eEEEEEECCCeEEEEEEECCE
Confidence 479999999999999997553
No 82
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=86.37 E-value=1.2 Score=48.06 Aligned_cols=76 Identities=21% Similarity=0.280 Sum_probs=46.2
Q ss_pred HHHHHHHHHHcCCceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEEEEeCCeEEEEEeeCCCCCChHH
Q 006381 159 RQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 238 (647)
Q Consensus 159 r~~l~~Aa~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~ 238 (647)
...+.++-+..|+++-.+=.|-+|.-.+.+..... .....+|+|+|||+|.+++++ ++.+ ......++|.-.
T Consensus 103 ~~fl~~i~~~tG~~ievIsG~EEA~l~~~gv~~~~---~~~~~lvvDIGGGStEl~~~~--~~~~---~~~~Sl~lG~vr 174 (508)
T 3hi0_A 103 PDFIREAEAILGCEIEVLSGEKEALYSAYGVISGF---YQPDGIAGDLGGGSLELIDIK--DKSC---GEGITLPLGGLR 174 (508)
T ss_dssp HHHHHHHHHHHTSCEEECCHHHHHHHHHHHHHHHS---SSCEEEEEEECSSCEEEEEEE--TTEE---CCCEEESCCHHH
T ss_pred HHHHHHHHHHHCCCeEEecHHHHHHHHHHHHHhcC---CCCCeEEEEeCCCceEEEEee--CCee---eeEEEecceEEe
Confidence 34555566678998644444555554444443332 122359999999999999985 3322 122235788877
Q ss_pred HHHH
Q 006381 239 FDNR 242 (647)
Q Consensus 239 ~d~~ 242 (647)
+.+.
T Consensus 175 l~e~ 178 (508)
T 3hi0_A 175 LSEQ 178 (508)
T ss_dssp HHHH
T ss_pred hhhc
Confidence 7653
No 83
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=85.72 E-value=2.1 Score=43.60 Aligned_cols=74 Identities=16% Similarity=0.209 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhCCcccc----CCCCchhhHHhHHHHHHHH
Q 006381 310 ELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELC----KSINPDEAVAYGAAVQAAI 385 (647)
Q Consensus 310 ~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~----~~~~p~~ava~GAa~~a~~ 385 (647)
++...+.+-+...|.+.++.... .++.|+++||+++.|.|.++|++.+++.++. ..++++.-=|..-|++|..
T Consensus 260 Dv~ATLt~~TA~sIa~~~~~~~~---~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~~ 336 (371)
T 3qbx_A 260 DIQATLLELSARSISESLLDAQP---DCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAHR 336 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCT---TCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccC---CCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHHH
Confidence 44445555555666666655432 3679999999999999999999999755442 2334555556666777765
Q ss_pred H
Q 006381 386 L 386 (647)
Q Consensus 386 ~ 386 (647)
.
T Consensus 337 ~ 337 (371)
T 3qbx_A 337 F 337 (371)
T ss_dssp H
T ss_pred H
Confidence 4
No 84
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=85.29 E-value=7.4 Score=42.14 Aligned_cols=204 Identities=15% Similarity=0.151 Sum_probs=100.0
Q ss_pred CCCcEEEEe-CCCCCHHHHHHH--HHHHHHcCCceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEEEE
Q 006381 142 TVKNAVVTV-PAYFNDSQRQAT--KDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTI 218 (647)
Q Consensus 142 ~~~~~ViTV-Pa~~~~~qr~~l--~~Aa~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~ 218 (647)
.++.+++|. |..|+....-.. +.-|...|++.+. ++--.|-+++..+.... ..+ +++-+-||++.+..+
T Consensus 72 ~id~ia~~~gPG~~~~l~vg~~~ak~la~~~~~p~~~-v~h~~aH~~~~~~~~~~--~~p---~~l~vsGg~t~~~~~-- 143 (540)
T 3en9_A 72 EIDLIAFSQGPGLGPSLRVTATVARTLSLTLKKPIIG-VNHCIAHIEIGKLTTEA--EDP---LTLYVSGGNTQVIAY-- 143 (540)
T ss_dssp GCCEEEEEEESSCHHHHHHHHHHHHHHHHHHTCCEEE-EEHHHHHHHHHHHHSSC--SSC---EEEEECSSCEEEEEE--
T ss_pred HCcEEEEecCCCchhhHHHHHHHHHHHHHHhCCCeeE-eccHHHHHHHHHHhcCC--CCC---cEEEEcCCCcEEEEE--
Confidence 466666665 777665432222 2233445666544 44434433322222221 122 666666788776544
Q ss_pred eCCeEEEEEeeCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCCcEEEEEccccCCce
Q 006381 219 EEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGID 298 (647)
Q Consensus 219 ~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~~~d 298 (647)
..+.+++++..-+ .--|+-||.. +..| +......+ . |...|.+.+ . .+.++....+.+
T Consensus 144 ~~~~~~~lg~t~d-~s~G~~~D~~-a~~l--------gl~~~gg~-~---ie~lA~~g~------~--~~~~p~~~~~~~ 201 (540)
T 3en9_A 144 VSKKYRVFGETLD-IAVGNCLDQF-ARYV--------NLPHPGGP-Y---IEELARKGK------K--LVDLPYTVKGMD 201 (540)
T ss_dssp ETTEEEEEEEBSS-SCHHHHHHHH-HHHT--------TCCSSCHH-H---HHHHHHTCC------C--CCCCCCCEETTE
T ss_pred eCCceEEEeeccc-hHhHHHHHHH-HHHc--------CCCCCCHH-H---HHHHHHcCC------c--cCcCCCCCCCcc
Confidence 4688999988764 4557777743 3322 22222212 2 222222211 0 011111111223
Q ss_pred eEEe-------------ecHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhC--C
Q 006381 299 FYSP-------------ITRARFEELNM-DLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFN--G 362 (647)
Q Consensus 299 ~~~~-------------itr~~fe~~~~-~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~--~ 362 (647)
+++. .+..++-..++ -+++.+.+.+.++++..+ ++.|+|+||-+....+++.|.+.+. +
T Consensus 202 ~sfsgl~~~~~~~~~~~~~~~~ia~~fq~~~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~~~~~ 276 (540)
T 3en9_A 202 IAFSGLLTAAMRAYDAGERLEDICYSLQEYAFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMCEGQN 276 (540)
T ss_dssp ECCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHHHHTT
T ss_pred eecHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHHHhcC
Confidence 2211 11222211111 234444455666666655 5799999999999999999998763 3
Q ss_pred ccccCCCC---chhhHHhHHH
Q 006381 363 KELCKSIN---PDEAVAYGAA 380 (647)
Q Consensus 363 ~~v~~~~~---p~~ava~GAa 380 (647)
.++..+.. .|.++..|.+
T Consensus 277 ~~~~~p~~~~~~Dngamia~~ 297 (540)
T 3en9_A 277 VDFYVPPKEFCGDNGAMIAWL 297 (540)
T ss_dssp CEEECCCHHHHSSCHHHHHHH
T ss_pred CEEEeCCCcCCCCCHHHHHHH
Confidence 34443321 2345555544
No 85
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=84.90 E-value=3.5 Score=43.83 Aligned_cols=58 Identities=10% Similarity=0.096 Sum_probs=41.2
Q ss_pred CHHHHHHHHHHHHHcCCce--eEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEEEE
Q 006381 155 NDSQRQATKDAGVIAGLNV--MRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTI 218 (647)
Q Consensus 155 ~~~qr~~l~~Aa~~AGl~~--~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~ 218 (647)
...-.+.+.+|.+.-|+++ +.++|+.+|++++..+.. ..+++-+=+|-||=-..+..+
T Consensus 184 G~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~------~~~~iglIlGTG~N~~y~e~~ 243 (485)
T 3o8m_A 184 GHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD------PQTKMGIIIGTGVNGAYYDVV 243 (485)
T ss_dssp TSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC------TTEEEEEEESSSEEEEEEEEG
T ss_pred CccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCC------CCcEEEEEEecCcceEEEeec
Confidence 3556778899998889863 689999999998765542 345666667777655555543
No 86
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=82.80 E-value=3.4 Score=41.78 Aligned_cols=69 Identities=16% Similarity=0.242 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhC--CccccCCC---CchhhHHhHHHHHHHHHcC
Q 006381 315 LFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFN--GKELCKSI---NPDEAVAYGAAVQAAILSG 388 (647)
Q Consensus 315 ~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~--~~~v~~~~---~p~~ava~GAa~~a~~~~~ 388 (647)
+.+.+.+.+.++++..+ ++.|+|+||.+...++++.|.+.+. +.++..+. -.|.++++|+|.+.....+
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g 306 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSG 306 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcC
Confidence 34445555566666554 5799999999999999999998773 33444333 3577899999977655443
No 87
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=82.50 E-value=5.3 Score=40.85 Aligned_cols=22 Identities=18% Similarity=0.140 Sum_probs=19.0
Q ss_pred CCCEEEEecCccceEEEEEECC
Q 006381 6 EGPAIGIDLGTTYSCVGVWQHD 27 (647)
Q Consensus 6 ~~~vvGID~GTt~s~va~~~~g 27 (647)
...++|||+|.|++.++++++|
T Consensus 8 ~~~~lgiDIGgt~i~~~l~d~G 29 (366)
T 3mcp_A 8 NRIVMTLDAGGTNFVFSAIQGG 29 (366)
T ss_dssp CCEEEEEECSSSEEEEEEEETT
T ss_pred CCEEEEEEECcceEEEEEEECC
Confidence 4679999999999999988744
No 88
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=82.13 E-value=2.5 Score=44.70 Aligned_cols=56 Identities=13% Similarity=-0.004 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHcCCc--eeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEEEE
Q 006381 157 SQRQATKDAGVIAGLN--VMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTI 218 (647)
Q Consensus 157 ~qr~~l~~Aa~~AGl~--~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~ 218 (647)
.-++.+.++....|++ ++.++|+..|++++..+. ..++++.+=+|.|+=-..+...
T Consensus 164 ~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~------~~~~~iglilGTGvgg~~i~~~ 221 (457)
T 2yhx_A 164 KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYT------DAXIKMGIIFGSGVNAAYWCDS 221 (457)
T ss_dssp SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHH------CTTEEEEEEESSSEEEEEEECG
T ss_pred HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhc------CCccEEEEEECcEEEEEEEECC
Confidence 5567777877666775 488999999999976552 2346777778888655555544
No 89
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=81.90 E-value=4.2 Score=41.34 Aligned_cols=74 Identities=15% Similarity=0.187 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhCCcccc----CCCCchhhHHhHHHHHHH
Q 006381 309 EELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELC----KSINPDEAVAYGAAVQAA 384 (647)
Q Consensus 309 e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~----~~~~p~~ava~GAa~~a~ 384 (647)
+++...+.+-+...|.+.++... ..+.|+++||+++.|.+.++|++.+++.++. ..++|+.-=|..-|++|.
T Consensus 266 ~Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aFA~LA~ 341 (370)
T 3cqy_A 266 EDIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAFAWLAM 341 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHHHHHHH
Confidence 35555566666666777776542 3568999999999999999999999764442 223455444444566665
Q ss_pred HH
Q 006381 385 IL 386 (647)
Q Consensus 385 ~~ 386 (647)
..
T Consensus 342 ~~ 343 (370)
T 3cqy_A 342 RY 343 (370)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 90
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=81.54 E-value=0.89 Score=49.09 Aligned_cols=26 Identities=27% Similarity=0.298 Sum_probs=18.4
Q ss_pred CCCCCCCCEEEEecCccceEEEEEEC
Q 006381 1 MAGKGEGPAIGIDLGTTYSCVGVWQH 26 (647)
Q Consensus 1 M~~~~~~~vvGID~GTt~s~va~~~~ 26 (647)
|+..++..++|||+|||++++++++.
T Consensus 1 ~~~~~~~~~lgIDiGtts~k~~l~d~ 26 (508)
T 3ifr_A 1 MSLAQGRQVIGLDIGTTSTIAILVRL 26 (508)
T ss_dssp ------CEEEEEEECSSEEEEEEEET
T ss_pred CCcccCCEEEEEEecCcceEEEEECC
Confidence 67767789999999999999999863
No 91
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=78.73 E-value=3 Score=46.90 Aligned_cols=66 Identities=21% Similarity=0.230 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhC--CccccC---CCCchhhHHhHHHHHHHHHcC
Q 006381 318 KCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFN--GKELCK---SINPDEAVAYGAAVQAAILSG 388 (647)
Q Consensus 318 ~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~--~~~v~~---~~~p~~ava~GAa~~a~~~~~ 388 (647)
.+.+.+.++.+..+ ++.|+|+||.+...++++.|.+.+. +.++.. ..-.|-++|+|.|++|+....
T Consensus 680 ~L~~~~~~a~~~~g-----~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~~ 750 (761)
T 3vth_A 680 FTYDLANLIRKETG-----INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKILE 750 (761)
T ss_dssp HHHHHHHHHHHHHC-----CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhC-----CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHhc
Confidence 33344444444444 5799999999999999999988862 334332 122488999999999876543
No 92
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=78.41 E-value=5.5 Score=43.90 Aligned_cols=49 Identities=20% Similarity=0.249 Sum_probs=38.9
Q ss_pred CCeEEEEcCCCCcHHHHHHHHhhhCCccccC---CCCchhhHHhHHHHHHHH
Q 006381 337 VHDVVLVGGSTRIPKVQQLLQDFFNGKELCK---SINPDEAVAYGAAVQAAI 385 (647)
Q Consensus 337 i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~---~~~p~~ava~GAa~~a~~ 385 (647)
++.|+|+||.+...++++.|.+.+.+.++.. ..-.|.++|+|.|++|+.
T Consensus 600 ~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 600 ITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp CCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred CCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 6799999999999999999999874444322 234588999999998864
No 93
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=77.37 E-value=4 Score=46.12 Aligned_cols=62 Identities=18% Similarity=0.295 Sum_probs=44.4
Q ss_pred HHHHHHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhC--CccccCCC---CchhhHHhHHHHHHHHH
Q 006381 320 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFN--GKELCKSI---NPDEAVAYGAAVQAAIL 386 (647)
Q Consensus 320 ~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~--~~~v~~~~---~p~~ava~GAa~~a~~~ 386 (647)
.+.+.++.++.+ ++.|+|.||......+++.|.+.+. +.++..+. -.|..+|+|+|++|+..
T Consensus 694 ~~~~~~a~~~tg-----~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~ 760 (772)
T 4g9i_A 694 AHTAVERAREFG-----VKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLY 760 (772)
T ss_dssp HHHHHHHHHTTT-----CSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC-----cCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHH
Confidence 344444444433 6789999999999999999999873 33443332 23889999999988654
No 94
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=73.40 E-value=2.2 Score=46.09 Aligned_cols=23 Identities=26% Similarity=0.175 Sum_probs=19.3
Q ss_pred CCCCCCCCEEEEecCccceEEEEEE
Q 006381 1 MAGKGEGPAIGIDLGTTYSCVGVWQ 25 (647)
Q Consensus 1 M~~~~~~~vvGID~GTt~s~va~~~ 25 (647)
|+. +..++|||+|||++++++++
T Consensus 1 m~~--~~~~lgIDiGtts~ka~l~d 23 (515)
T 3i8b_A 1 MSL--RTLVAGVDTSTQSCKVRVTD 23 (515)
T ss_dssp -CC--SCEEEEEEECSSEEEEEEEE
T ss_pred CCC--CcEEEEEEeccccEEEEEEE
Confidence 654 45899999999999999997
No 95
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=71.83 E-value=12 Score=36.90 Aligned_cols=49 Identities=18% Similarity=0.192 Sum_probs=32.0
Q ss_pred CCeEEEEcCCCCcH----HHHHHHHhhhCC------------ccccCCCCchhhHHhHHHHHHHH
Q 006381 337 VHDVVLVGGSTRIP----KVQQLLQDFFNG------------KELCKSINPDEAVAYGAAVQAAI 385 (647)
Q Consensus 337 i~~ViLvGG~s~~p----~v~~~l~~~f~~------------~~v~~~~~p~~ava~GAa~~a~~ 385 (647)
++.|+|-||.++.+ .+++.+.+.... ..+....-.+.+.++|||.++..
T Consensus 225 Pe~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa~l~~~ 289 (302)
T 3epq_A 225 PXXIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLAHQ 289 (302)
T ss_dssp CSCEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHHHHHHHHHHHH
T ss_pred chhhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHHHHHHHHHHHH
Confidence 68899999988764 455555554311 12333445567999999988753
No 96
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=71.10 E-value=15 Score=35.78 Aligned_cols=49 Identities=18% Similarity=0.129 Sum_probs=33.2
Q ss_pred CCeEEEEcCCCCcHHHHHHHHhhhC-----------CccccCCCCchhhHHhHHHHHHHH
Q 006381 337 VHDVVLVGGSTRIPKVQQLLQDFFN-----------GKELCKSINPDEAVAYGAAVQAAI 385 (647)
Q Consensus 337 i~~ViLvGG~s~~p~v~~~l~~~f~-----------~~~v~~~~~p~~ava~GAa~~a~~ 385 (647)
++.|+|.||.+..|.+.+.+++.+. ..++....-.+.+.++|||.++..
T Consensus 228 p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~ 287 (292)
T 2gup_A 228 PGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQ 287 (292)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHH
T ss_pred CCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHHH
Confidence 5789999999877777666665541 123333334567899999988754
No 97
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=70.61 E-value=2.6 Score=45.93 Aligned_cols=23 Identities=35% Similarity=0.520 Sum_probs=18.3
Q ss_pred CCCCCCCCEEEEecCccceEEEEEE
Q 006381 1 MAGKGEGPAIGIDLGTTYSCVGVWQ 25 (647)
Q Consensus 1 M~~~~~~~vvGID~GTt~s~va~~~ 25 (647)
|.. +..++|||+|||++++++++
T Consensus 1 m~~--~~~~lgIDiGtts~ka~l~d 23 (554)
T 3l0q_A 1 MSL--ASYFIGVDVGTGSARAGVFD 23 (554)
T ss_dssp -----CCEEEEEEECSSEEEEEEEE
T ss_pred CCC--CcEEEEEEECcccEEEEEEC
Confidence 554 56899999999999999986
No 98
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=70.33 E-value=4.2 Score=41.41 Aligned_cols=20 Identities=25% Similarity=0.561 Sum_probs=17.4
Q ss_pred CeeEEEEEeCCCceEEEEEE
Q 006381 198 EKNVLIFDLGGGTFDVSLLT 217 (647)
Q Consensus 198 ~~~vlV~D~GggT~dvsv~~ 217 (647)
.++++|+|+|||+|.++...
T Consensus 139 ~~t~~v~DiGGGStei~~~~ 158 (353)
T 3aap_A 139 NKSVGVMDMGGASVQIVFPM 158 (353)
T ss_dssp SSCEEEEEECSSEEEEEEEC
T ss_pred cccEEEEEeCCCceEEEEec
Confidence 35799999999999999873
No 99
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=70.31 E-value=2.5 Score=46.33 Aligned_cols=24 Identities=25% Similarity=0.235 Sum_probs=18.1
Q ss_pred CCCCCCCCEEEEecCccceEEEEEEC
Q 006381 1 MAGKGEGPAIGIDLGTTYSCVGVWQH 26 (647)
Q Consensus 1 M~~~~~~~vvGID~GTt~s~va~~~~ 26 (647)
|++ +..++|||+|||++++++++.
T Consensus 1 m~~--~~~~lgIDiGTts~Ka~l~d~ 24 (572)
T 3jvp_A 1 MSL--TKYTIGVDYGTESGRAVLIDL 24 (572)
T ss_dssp ------CEEEEEEECSSEEEEEEEET
T ss_pred CCC--CCEEEEEecCCcceEEEEEEC
Confidence 554 468999999999999999863
No 100
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=69.31 E-value=12 Score=40.48 Aligned_cols=67 Identities=16% Similarity=0.197 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhCCccccC-CCCchhhHHhHHHHHHHHHcCC
Q 006381 318 KCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCK-SINPDEAVAYGAAVQAAILSGE 389 (647)
Q Consensus 318 ~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~-~~~p~~ava~GAa~~a~~~~~~ 389 (647)
-+.+.+..+.+..+ ++.|+|.||.+....+++.|.+..+-..+.. +.-.|..+++|+|+++....+.
T Consensus 294 ~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~a~~~~g~ 361 (576)
T 3ven_A 294 AVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAAVAVELGD 361 (576)
T ss_dssp HHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHHHHHHcCC
Confidence 33445555555544 6799999999999999999987652223322 2345789999999999876553
No 101
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=68.15 E-value=3.7 Score=33.20 Aligned_cols=20 Identities=15% Similarity=0.167 Sum_probs=17.3
Q ss_pred CEEEEecCccceEEEEEECC
Q 006381 8 PAIGIDLGTTYSCVGVWQHD 27 (647)
Q Consensus 8 ~vvGID~GTt~s~va~~~~g 27 (647)
.++|||+|+..+.+|+.++.
T Consensus 2 riLglD~G~kriGvAvsd~~ 21 (98)
T 1iv0_A 2 RVGALDVGEARIGLAVGEEG 21 (98)
T ss_dssp CEEEEEESSSEEEEEEECSC
T ss_pred cEEEEEeCCCEEEEEEEeCC
Confidence 38999999999999998653
No 102
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=67.97 E-value=2.8 Score=45.17 Aligned_cols=20 Identities=20% Similarity=0.041 Sum_probs=18.1
Q ss_pred CCCEEEEecCccceEEEEEE
Q 006381 6 EGPAIGIDLGTTYSCVGVWQ 25 (647)
Q Consensus 6 ~~~vvGID~GTt~s~va~~~ 25 (647)
|..++|||+|||++++++++
T Consensus 4 m~~~lgIDiGtts~k~~l~d 23 (511)
T 3hz6_A 4 AFYIATFDIGTTEVKAALAD 23 (511)
T ss_dssp CCEEEEEEECSSEEEEEEEC
T ss_pred ccEEEEEEeCCCceEEEEEC
Confidence 46899999999999999985
No 103
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=67.08 E-value=3.8 Score=44.07 Aligned_cols=24 Identities=33% Similarity=0.392 Sum_probs=19.4
Q ss_pred CCCCCCCCEEEEecCccceEEEEEEC
Q 006381 1 MAGKGEGPAIGIDLGTTYSCVGVWQH 26 (647)
Q Consensus 1 M~~~~~~~vvGID~GTt~s~va~~~~ 26 (647)
|.. +..++|||+|||++++++++.
T Consensus 1 m~~--~~~~lgIDiGtts~k~~l~d~ 24 (506)
T 3h3n_X 1 MAE--KNYVMAIDQGTTSSRAIIFDR 24 (506)
T ss_dssp -CC--CCEEEEEEECSSEEEEEEEET
T ss_pred CCC--CCEEEEEEcCCCceEEEEECC
Confidence 654 458999999999999999863
No 104
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=66.22 E-value=5.5 Score=34.45 Aligned_cols=20 Identities=30% Similarity=0.267 Sum_probs=18.1
Q ss_pred CEEEEecCccceEEEEEECC
Q 006381 8 PAIGIDLGTTYSCVGVWQHD 27 (647)
Q Consensus 8 ~vvGID~GTt~s~va~~~~g 27 (647)
.++|||+|+..+++|+.++.
T Consensus 4 ~iLglD~G~kriGvAvsd~~ 23 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRI 23 (138)
T ss_dssp EEEEEECCSSEEEEEEEETT
T ss_pred eEEEEEeCCCEEEEEEEcCC
Confidence 58999999999999998764
No 105
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=66.07 E-value=22 Score=37.39 Aligned_cols=20 Identities=25% Similarity=0.463 Sum_probs=17.2
Q ss_pred CeeEEEEEeCCCceEEEEEE
Q 006381 198 EKNVLIFDLGGGTFDVSLLT 217 (647)
Q Consensus 198 ~~~vlV~D~GggT~dvsv~~ 217 (647)
..+++|+|+|||++.++...
T Consensus 189 ~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 189 KGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp CCCCEEEEECSSEEEEEEEC
T ss_pred CCceEEEEcCCCceEEEecc
Confidence 45689999999999999874
No 106
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=65.65 E-value=3.9 Score=44.37 Aligned_cols=21 Identities=19% Similarity=0.101 Sum_probs=18.6
Q ss_pred CCCEEEEecCccceEEEEEEC
Q 006381 6 EGPAIGIDLGTTYSCVGVWQH 26 (647)
Q Consensus 6 ~~~vvGID~GTt~s~va~~~~ 26 (647)
+..++|||+|||++++++++.
T Consensus 9 ~~~~lgID~GTts~Ka~l~d~ 29 (538)
T 4bc3_A 9 RRCCLGWDFSTQQVKVVAVDA 29 (538)
T ss_dssp CCEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEEEcCcCEEEEEECC
Confidence 468999999999999998863
No 107
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=65.21 E-value=3.7 Score=44.10 Aligned_cols=21 Identities=29% Similarity=0.286 Sum_probs=18.3
Q ss_pred CCCEEEEecCccceEEEEEEC
Q 006381 6 EGPAIGIDLGTTYSCVGVWQH 26 (647)
Q Consensus 6 ~~~vvGID~GTt~s~va~~~~ 26 (647)
+..++|||+|||++++++++.
T Consensus 3 m~~~lgIDiGtts~K~~l~d~ 23 (504)
T 3ll3_A 3 LKYIIGMDVGTTATKGVLYDI 23 (504)
T ss_dssp CEEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEEecCCceEEEEEcC
Confidence 357999999999999999863
No 108
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=64.82 E-value=16 Score=35.90 Aligned_cols=50 Identities=16% Similarity=0.169 Sum_probs=36.5
Q ss_pred CCeEEEEcCCCCcHHHHHHHHhhhCC-----ccccCCCCchhhHHhHHHHHHHHH
Q 006381 337 VHDVVLVGGSTRIPKVQQLLQDFFNG-----KELCKSINPDEAVAYGAAVQAAIL 386 (647)
Q Consensus 337 i~~ViLvGG~s~~p~v~~~l~~~f~~-----~~v~~~~~p~~ava~GAa~~a~~~ 386 (647)
++.|+|.||.+..|.+.+.|++.+.. .++....-.+.+.++|||.++...
T Consensus 238 p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~~ 292 (297)
T 4htl_A 238 PTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQE 292 (297)
T ss_dssp CSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHHH
Confidence 57899999999888777778777632 133444456779999999887643
No 109
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=63.64 E-value=3.5 Score=44.55 Aligned_cols=19 Identities=32% Similarity=0.253 Sum_probs=17.5
Q ss_pred CCEEEEecCccceEEEEEE
Q 006381 7 GPAIGIDLGTTYSCVGVWQ 25 (647)
Q Consensus 7 ~~vvGID~GTt~s~va~~~ 25 (647)
.+++|||+|||++++++++
T Consensus 4 kYvlgID~GTss~Ka~l~d 22 (526)
T 3ezw_A 4 KYIVALDQGTTSSRAVVMD 22 (526)
T ss_dssp CEEEEEEECSSEEEEEEEC
T ss_pred eEEEEEEccccceeeeEEc
Confidence 5899999999999999885
No 110
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=62.39 E-value=47 Score=27.22 Aligned_cols=51 Identities=16% Similarity=0.231 Sum_probs=36.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 006381 567 KLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQGAG 621 (647)
Q Consensus 567 ~~~~~~~~~i~~~l~~~~~wl~~~~~~~~~~~~~k~~~l~~~~~~i~~r~~e~~~ 621 (647)
++-+.++..+...|++-.+-++. ..+.++.+++.++.....+...+++..+
T Consensus 62 vfv~~~~~ea~~~L~~~~e~ie~----~i~~le~~~~~l~~~l~~lk~~l~~~~~ 112 (117)
T 2zqm_A 62 LIVKTTKDKAVAELKEKIETLEV----RLNALERQEKKLNEKLKELTAQIQSALR 112 (117)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHhhccHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34445666677777777666654 5677888888888888888888888663
No 111
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=62.02 E-value=3.9 Score=43.97 Aligned_cols=20 Identities=30% Similarity=0.260 Sum_probs=17.9
Q ss_pred CCCEEEEecCccceEEEEEE
Q 006381 6 EGPAIGIDLGTTYSCVGVWQ 25 (647)
Q Consensus 6 ~~~vvGID~GTt~s~va~~~ 25 (647)
+..++|||+|||++++++++
T Consensus 2 ~~~~lgIDiGtts~k~~l~d 21 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVMD 21 (510)
T ss_dssp CCEEEEEEECSSEEEEEEEC
T ss_pred CcEEEEEEcCCcceEEEEEC
Confidence 45799999999999999985
No 112
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=60.79 E-value=3.7 Score=43.78 Aligned_cols=20 Identities=50% Similarity=0.835 Sum_probs=16.2
Q ss_pred CCCEEEEecCccceEEEEEE
Q 006381 6 EGPAIGIDLGTTYSCVGVWQ 25 (647)
Q Consensus 6 ~~~vvGID~GTt~s~va~~~ 25 (647)
|..++|||+|||++++++++
T Consensus 5 m~~~lgIDiGTts~Ka~l~d 24 (482)
T 3h6e_A 5 TGATIVIDLGKTLSKVSLWD 24 (482)
T ss_dssp ---CEEEEECSSEEEEEEEC
T ss_pred hceEEEEEcCCCCeEEEEEE
Confidence 35899999999999999985
No 113
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=60.22 E-value=15 Score=35.86 Aligned_cols=47 Identities=21% Similarity=0.226 Sum_probs=32.9
Q ss_pred CCeEEEEcCCCCcHHHHHHHHhhhCCc------cccCCCCchhhHHhHHHHHH
Q 006381 337 VHDVVLVGGSTRIPKVQQLLQDFFNGK------ELCKSINPDEAVAYGAAVQA 383 (647)
Q Consensus 337 i~~ViLvGG~s~~p~v~~~l~~~f~~~------~v~~~~~p~~ava~GAa~~a 383 (647)
++.|+|.||.+..+.+.+.+++.+... ++......+.+.++|||.++
T Consensus 234 p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 234 CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHH
Confidence 568999999887777878777766321 23333345668999999876
No 114
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=59.75 E-value=4.4 Score=43.26 Aligned_cols=19 Identities=21% Similarity=0.328 Sum_probs=17.2
Q ss_pred CCEEEEecCccceEEEEEE
Q 006381 7 GPAIGIDLGTTYSCVGVWQ 25 (647)
Q Consensus 7 ~~vvGID~GTt~s~va~~~ 25 (647)
..++|||+|||++++++++
T Consensus 4 ~~~lgiDiGtts~k~~l~d 22 (489)
T 2uyt_A 4 RNCVAVDLGASSGRVMLAR 22 (489)
T ss_dssp EEEEEEEECSSEEEEEEEE
T ss_pred ceEEEEEecCCCceEEEEE
Confidence 5699999999999999885
No 115
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=59.26 E-value=5 Score=43.28 Aligned_cols=19 Identities=37% Similarity=0.450 Sum_probs=17.3
Q ss_pred CCEEEEecCccceEEEEEE
Q 006381 7 GPAIGIDLGTTYSCVGVWQ 25 (647)
Q Consensus 7 ~~vvGID~GTt~s~va~~~ 25 (647)
..++|||+|||++++++++
T Consensus 26 ~~~lgIDiGtts~k~~l~d 44 (520)
T 4e1j_A 26 GYILAIDQGTTSTRAIVFD 44 (520)
T ss_dssp CEEEEEEECSSEEEEEEEC
T ss_pred CeEEEEEeCCcceEEEEEC
Confidence 4799999999999999985
No 116
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=58.43 E-value=5 Score=42.93 Aligned_cols=19 Identities=26% Similarity=0.272 Sum_probs=16.8
Q ss_pred CCEEEEecCccceEEEEEE
Q 006381 7 GPAIGIDLGTTYSCVGVWQ 25 (647)
Q Consensus 7 ~~vvGID~GTt~s~va~~~ 25 (647)
..++|||+|||++++++++
T Consensus 2 ~~~lgiDiGtT~~k~~l~d 20 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFT 20 (495)
T ss_dssp -CEEEEEECSSEEEEEEEC
T ss_pred cEEEEEeeCCcceEEEEEC
Confidence 3689999999999999985
No 117
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=57.42 E-value=37 Score=39.19 Aligned_cols=57 Identities=11% Similarity=0.150 Sum_probs=38.9
Q ss_pred CHHHHHHHHHHHHHc-CC--ceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEEE
Q 006381 155 NDSQRQATKDAGVIA-GL--NVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLT 217 (647)
Q Consensus 155 ~~~qr~~l~~Aa~~A-Gl--~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~ 217 (647)
...-.+.+++|...- ++ +++.++|+..|++++..+.. ..+++-+=+|.|+=-..+..
T Consensus 630 g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~------~~~~iglIlGTG~na~y~e~ 689 (917)
T 1cza_N 630 GHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEE------PTCEVGLIVGTGSNACYMEE 689 (917)
T ss_dssp TSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTC------TTEEEEEEESSSEEEEEEEE
T ss_pred CCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCC------CCcEEEEEEeCCeeEEEEEc
Confidence 555677788887643 55 58899999999988765542 33666666777765555544
No 118
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=57.31 E-value=5.3 Score=42.84 Aligned_cols=20 Identities=20% Similarity=0.194 Sum_probs=17.6
Q ss_pred CCEEEEecCccceEEEEEEC
Q 006381 7 GPAIGIDLGTTYSCVGVWQH 26 (647)
Q Consensus 7 ~~vvGID~GTt~s~va~~~~ 26 (647)
..++|||+|||++++++++.
T Consensus 4 ~~~lgIDiGtT~~k~~l~d~ 23 (503)
T 2w40_A 4 NVILSIDQSTQSTKVFFYDE 23 (503)
T ss_dssp EEEEEEEECSSEEEEEEEET
T ss_pred cEEEEEEeCCcceEEEEECC
Confidence 46899999999999999863
No 119
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=56.86 E-value=7.6 Score=37.71 Aligned_cols=21 Identities=29% Similarity=0.433 Sum_probs=18.9
Q ss_pred CEEEEecCccceEEEEEECCe
Q 006381 8 PAIGIDLGTTYSCVGVWQHDR 28 (647)
Q Consensus 8 ~vvGID~GTt~s~va~~~~g~ 28 (647)
..++||+|+|+++.++++++.
T Consensus 3 MlL~IDIGNT~iK~gl~d~~~ 23 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDGDE 23 (266)
T ss_dssp CEEEEEECSSEEEEEEEETTE
T ss_pred eEEEEEECCCeEEEEEEECCE
Confidence 489999999999999998774
No 120
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=56.55 E-value=5.7 Score=34.89 Aligned_cols=19 Identities=32% Similarity=0.459 Sum_probs=17.0
Q ss_pred CEEEEecCccceEEEEEEC
Q 006381 8 PAIGIDLGTTYSCVGVWQH 26 (647)
Q Consensus 8 ~vvGID~GTt~s~va~~~~ 26 (647)
.++|||+|+..+++|+.+.
T Consensus 4 riLGiDpG~~riGvAv~d~ 22 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDE 22 (150)
T ss_dssp EEEEEEECSSEEEEEEECT
T ss_pred EEEEEEccCCEEEEEEEEC
Confidence 5999999999999998864
No 121
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=56.01 E-value=5.9 Score=42.44 Aligned_cols=19 Identities=32% Similarity=0.294 Sum_probs=17.3
Q ss_pred CCEEEEecCccceEEEEEE
Q 006381 7 GPAIGIDLGTTYSCVGVWQ 25 (647)
Q Consensus 7 ~~vvGID~GTt~s~va~~~ 25 (647)
..++|||+|||++++++++
T Consensus 6 ~~~lgIDiGtts~k~~l~d 24 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILFN 24 (501)
T ss_dssp CEEEEEEECSSEEEEEEEC
T ss_pred cEEEEEEeCccceEEEEEc
Confidence 3799999999999999985
No 122
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=55.28 E-value=41 Score=35.06 Aligned_cols=130 Identities=16% Similarity=0.181 Sum_probs=0.0
Q ss_pred CCCCCCCEEEEecCccceEEEEEE-CCeeEEEecCCCCcccceEEEEcCCceEecHHHHHHHhhCcCchHHhhHHhhCCC
Q 006381 2 AGKGEGPAIGIDLGTTYSCVGVWQ-HDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRR 80 (647)
Q Consensus 2 ~~~~~~~vvGID~GTt~s~va~~~-~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~~lg~~ 80 (647)
.++.....++||||.||.+|+.++ .|. +........+|.
T Consensus 54 ~G~E~G~~LAlDlGGTn~RV~~V~l~g~---~~~~~~~~~ip~------------------------------------- 93 (445)
T 3hm8_A 54 DGSERGDFLALDLGGTNFRVLLVRVTTG---VQITSEIYSIPE------------------------------------- 93 (445)
T ss_dssp CSCCCEEEEEEEESSSSEEEEEEEESSS---EEEEEEEECCCH-------------------------------------
T ss_pred CCceeeEEEEEEecCCeEEEEEEEECCc---eEEEEEEeccCc-------------------------------------
Q ss_pred CCChhhhhcccCCCeEEEecCCCcceEEEEEcCceeEEeHHHHHHHHHHHHHHHHHHHhC---CCCCcEEEEeCCC----
Q 006381 81 FSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLG---STVKNAVVTVPAY---- 153 (647)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~---~~~~~~ViTVPa~---- 153 (647)
....-+.+++...+-..|.+..+.+-. .-+..+.++.|..
T Consensus 94 ---------------------------------~~~~g~~~~LFd~Ia~~i~~fl~~~~~~~~~lplGftFSFP~~Q~sl 140 (445)
T 3hm8_A 94 ---------------------------------TVAQGSGQQLFDHIVDCIVDFQQKQGLSGQSLPLGFTFSFPCRQLGL 140 (445)
T ss_dssp ---------------------------------HHHTSBHHHHHHHHHHHHHHHHHHHTCTTCCCCEEEEECSCEECSST
T ss_pred ---------------------------------cccCCCHHHHHHHHHHHHHHHHHHhCcccccCcceEEEeeeeEeccC
Q ss_pred -------CC----------HHHHHHHHHHHHHcC---CceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCc
Q 006381 154 -------FN----------DSQRQATKDAGVIAG---LNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGT 210 (647)
Q Consensus 154 -------~~----------~~qr~~l~~Aa~~AG---l~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT 210 (647)
|+ ..-.+.+++|...-| ++++.++|+.+|+.++..+.... +.+-+=+|-||
T Consensus 141 ~~g~Li~wtKGF~~~~~~G~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~~~------~~iglIlGTGt 211 (445)
T 3hm8_A 141 DQGILLNWTKGFKASDCEGQDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYEDPR------CEIGLIVGTGT 211 (445)
T ss_dssp TCCEECCCCTTCCCBTCTTSBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTCTT------EEEEEEESSSE
T ss_pred CceEEEEeeccccCCCCCCCcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCCCC------ceEEEEEeCCc
No 123
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=55.17 E-value=36 Score=33.54 Aligned_cols=49 Identities=22% Similarity=0.261 Sum_probs=34.0
Q ss_pred CCeEEEEcCCCCc-----HHHHHHHHhhhC------CccccCCCCchhhHHhHHHHHHHH
Q 006381 337 VHDVVLVGGSTRI-----PKVQQLLQDFFN------GKELCKSINPDEAVAYGAAVQAAI 385 (647)
Q Consensus 337 i~~ViLvGG~s~~-----p~v~~~l~~~f~------~~~v~~~~~p~~ava~GAa~~a~~ 385 (647)
++.|+|-||.++. +.+++.+++.+. ..++....-.+.+.++|||.++..
T Consensus 240 P~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~~ 299 (310)
T 3htv_A 240 PDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQ 299 (310)
T ss_dssp CSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHHH
T ss_pred CCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHHH
Confidence 6889999998875 467777776652 123333334578999999988753
No 124
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=54.71 E-value=13 Score=32.89 Aligned_cols=18 Identities=33% Similarity=0.506 Sum_probs=16.2
Q ss_pred CEEEEecCccceEEEEEE
Q 006381 8 PAIGIDLGTTYSCVGVWQ 25 (647)
Q Consensus 8 ~vvGID~GTt~s~va~~~ 25 (647)
.++|||.|++++..++.+
T Consensus 2 ~ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp EEEEEECCSSEEEEEEEE
T ss_pred EEEEEccCCCCeeEEEEE
Confidence 489999999999999884
No 125
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=53.60 E-value=7.1 Score=41.78 Aligned_cols=20 Identities=20% Similarity=0.260 Sum_probs=17.6
Q ss_pred CCEEEEecCccceEEEEEEC
Q 006381 7 GPAIGIDLGTTYSCVGVWQH 26 (647)
Q Consensus 7 ~~vvGID~GTt~s~va~~~~ 26 (647)
..++|||+|||++++++++.
T Consensus 3 ~~~lgiDiGtt~~k~~l~d~ 22 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIFDR 22 (497)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred cEEEEEecCCchhEEEEECC
Confidence 46899999999999999853
No 126
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=50.92 E-value=15 Score=35.93 Aligned_cols=68 Identities=6% Similarity=-0.105 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCC-CCCeEEEEcCCCCc--HHHHHHHHhhhCCccccCCCCchhhHHhHHHHHHHHH
Q 006381 311 LNMDLFRKCMEPVEKCLRDAKMDKS-SVHDVVLVGGSTRI--PKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAIL 386 (647)
Q Consensus 311 ~~~~~~~~~~~~i~~~l~~~~~~~~-~i~~ViLvGG~s~~--p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~~ 386 (647)
....++++....+-..+ . +... +++.|+|.||.++. +.+++.+++... ++ ..|..+...||+.++...
T Consensus 211 ~A~~i~~~~~~~La~~i-~--~~~~~~p~~vvlgGGv~~~~~~~l~~~l~~~~~--~i---~~~~~a~~~GA~~la~~~ 281 (291)
T 1zbs_A 211 AVYSLVQNSFDDFLVRN-V--LRYNRPDLPLHFIGSVAFHYREVLSSVIKKRGL--TL---GSVLQSPMEGLIQYHHNN 281 (291)
T ss_dssp HHHHHHHHHHHHHHHHH-T--GGGCCTTSCEEEESHHHHHTHHHHHHHHHHTTC--CE---EEEESCSHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHH-h--cccCCCCceEEEECchHHhhHHHHHHHHHHcCC--ee---cccCcCHHHHHHHHHHhh
Confidence 34455555555555555 2 2222 56789999998876 777777766431 22 235578999999998643
No 127
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=49.63 E-value=41 Score=38.82 Aligned_cols=57 Identities=14% Similarity=0.221 Sum_probs=38.6
Q ss_pred CHHHHHHHHHHHHHcC-Cc--eeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEEE
Q 006381 155 NDSQRQATKDAGVIAG-LN--VMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLT 217 (647)
Q Consensus 155 ~~~qr~~l~~Aa~~AG-l~--~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~ 217 (647)
...-++.+.++...-| ++ ++.++|+..|++++-.+.. .++++.+=+|.|+=-.-+..
T Consensus 182 g~~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~~~------~~~~iglilGTGvngg~i~~ 241 (917)
T 1cza_N 182 GADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDD------QHCEVGLIIGTGTNACYMEE 241 (917)
T ss_dssp TSBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHHC------TTEEEEEEESSSEEEEEEEE
T ss_pred CCchHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhccC------CCcEEEEEEECCcceEEEec
Confidence 3455677777777666 54 6899999999999765441 34667777787755444444
No 128
>2nr5_A Hypothetical protein SO2669; PSI-2, MCSG, MAD, structural G protein structure initiative, midwest center for structural genomics; 1.90A {Shewanella oneidensis} SCOP: a.25.6.1
Probab=48.69 E-value=61 Score=22.20 Aligned_cols=22 Identities=14% Similarity=0.220 Sum_probs=16.9
Q ss_pred CHHHHHHHHHHHHHHHHHHhcC
Q 006381 569 APADKKKIEDAIDQAIQWLDSN 590 (647)
Q Consensus 569 ~~~~~~~i~~~l~~~~~wl~~~ 590 (647)
.-++.+.-...+.++++||..+
T Consensus 42 dmqeveiwtnrikeledwlwge 63 (67)
T 2nr5_A 42 DMQEVEIWTNRIKELEDWLWGE 63 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHhhcC
Confidence 3456666778899999999865
No 129
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=48.24 E-value=39 Score=34.47 Aligned_cols=48 Identities=19% Similarity=0.143 Sum_probs=33.0
Q ss_pred CCCeEEEEcCCCCcHH-HHHHHHhhhCCc---cccCCCCchhhHHhHHHHHH
Q 006381 336 SVHDVVLVGGSTRIPK-VQQLLQDFFNGK---ELCKSINPDEAVAYGAAVQA 383 (647)
Q Consensus 336 ~i~~ViLvGG~s~~p~-v~~~l~~~f~~~---~v~~~~~p~~ava~GAa~~a 383 (647)
+++.|+|.||.+..+. +.+.|++.+... .+........+.++||+..+
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~ 346 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVL 346 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHH
Confidence 4789999999987544 777777776321 23323334468999999875
No 130
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=47.77 E-value=61 Score=28.24 Aligned_cols=66 Identities=12% Similarity=0.209 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHhhccchhhcCCCCHHHHHHHHHHHHHHHHHHhcC-Cc--cCHHHHHHHHHHHHHHHHHHHHHHhc
Q 006381 542 VEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSN-QL--AEADEFEDKMKELESICNPIIAKMYQ 618 (647)
Q Consensus 542 ~~a~n~lE~~i~~~r~~l~~~~~~~~~~~~~~~~i~~~l~~~~~wl~~~-~~--~~~~~~~~k~~~l~~~~~~i~~r~~e 618 (647)
.+|--.|+.|+-.+...++ ++..+.++|.+........ .. -..++|+.|++.++++...+...+..
T Consensus 78 eeA~~~L~eYn~rL~~E~~-----------dR~~L~~~L~~~~~~~~~~l~e~e~~leeyK~Kl~rv~~vkkeL~~hi~s 146 (152)
T 4fla_A 78 DEACLLLAEYNGRLAAELE-----------DRRQLARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQVRKELKSHIQS 146 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4444556666655555553 4567777777776665543 12 26779999999999988888877653
No 131
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=45.61 E-value=22 Score=37.18 Aligned_cols=44 Identities=23% Similarity=0.355 Sum_probs=26.7
Q ss_pred eeEecChhHHHHhcc-----cccccccCCCCeeEEEEEeCCCceEEEEEE
Q 006381 173 VMRIINEPTAAAIAY-----GLDKKATSVGEKNVLIFDLGGGTFDVSLLT 217 (647)
Q Consensus 173 ~~~li~Ep~Aaa~~y-----~~~~~~~~~~~~~vlV~D~GggT~dvsv~~ 217 (647)
.+++|+-.+=+.++| .+..-.. ....++.++|+|||++.++...
T Consensus 151 ~v~iisG~eEg~y~wi~vnyllg~l~~-~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 151 GAKIITGQEEGAYGWITINYLLGRFKT-PGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp EEEECCHHHHHHHHHHHHHHHTTTTC----CCCCEEEEECSSEEEEEECC
T ss_pred ceEECCchhhhhhhHHHHHhhhccccC-CCCCceEEEecCCCceEEEecc
Confidence 467777665544433 3322110 0235688999999999998754
No 132
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=44.46 E-value=60 Score=34.09 Aligned_cols=55 Identities=16% Similarity=0.218 Sum_probs=37.3
Q ss_pred CHHHHHHHHHHHHHcC---CceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEE
Q 006381 155 NDSQRQATKDAGVIAG---LNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSL 215 (647)
Q Consensus 155 ~~~qr~~l~~Aa~~AG---l~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv 215 (647)
...-.+.+++|.+.-| ++++.++|+.+|.-++.++.. +.+.+=+=+|-||=-+.+
T Consensus 183 G~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~------~~~~iGlI~GTGtNa~Y~ 240 (470)
T 3f9m_A 183 GNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYED------HQCEVGMIVGTGCNACYM 240 (470)
T ss_dssp TSBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTC------TTEEEEEEESSSEEEEEE
T ss_pred CccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCC------CCceEEEEEecCCceEEe
Confidence 3455788888988887 367889999999877665432 235555556777654433
No 133
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=43.96 E-value=20 Score=31.90 Aligned_cols=18 Identities=39% Similarity=0.403 Sum_probs=16.2
Q ss_pred CEEEEecCccceEEEEEE
Q 006381 8 PAIGIDLGTTYSCVGVWQ 25 (647)
Q Consensus 8 ~vvGID~GTt~s~va~~~ 25 (647)
.++|||.|++++..++.+
T Consensus 2 rILGIDPGl~~tG~gvi~ 19 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVA 19 (166)
T ss_dssp EEEEEECCSSEEEEEEEE
T ss_pred EEEEEccccCceEEEEEE
Confidence 489999999999999874
No 134
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=43.95 E-value=13 Score=37.11 Aligned_cols=72 Identities=13% Similarity=0.075 Sum_probs=39.7
Q ss_pred ecHHHHHHHHHHHHHHHHHHH----HHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhCCccc--cC-CCCchhhH
Q 006381 303 ITRARFEELNMDLFRKCMEPV----EKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKEL--CK-SINPDEAV 375 (647)
Q Consensus 303 itr~~fe~~~~~~~~~~~~~i----~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v--~~-~~~p~~av 375 (647)
++.++.+++.+.++++.++.| .+.+++.+ +..|+.+||. ++|-..+.+.++-..+ .. +.+.+-+-
T Consensus 243 ~~~~~~~~lA~~~~~~q~~~I~~av~~v~~~~~-----~~~vv~aG~G---~~L~~~la~~~~~~~~~~~i~~~~s~vap 314 (334)
T 3cet_A 243 ISEIDAENIAKNYYELWKELILENVENVAEKYG-----SKKVVITGLG---ENILKDALADFEVISVAERYGKDVSLATP 314 (334)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCEEEEESTT---HHHHHHHTTTSEEEEHHHHHCHHHHHSHH
T ss_pred cChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCeEEEeCCc---HHHHHHHHhhCCeeehhcccCcccccccC
Confidence 356666666665555555444 44444433 3478999977 4566665544311100 01 22345678
Q ss_pred HhHHHHH
Q 006381 376 AYGAAVQ 382 (647)
Q Consensus 376 a~GAa~~ 382 (647)
|.|+|++
T Consensus 315 A~avA~l 321 (334)
T 3cet_A 315 SFAVAEL 321 (334)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8888865
No 135
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=43.83 E-value=13 Score=39.43 Aligned_cols=17 Identities=47% Similarity=0.483 Sum_probs=15.8
Q ss_pred EEEEecCccceEEEEEE
Q 006381 9 AIGIDLGTTYSCVGVWQ 25 (647)
Q Consensus 9 vvGID~GTt~s~va~~~ 25 (647)
++|||+|||++++++++
T Consensus 2 ~lgiDiGtt~~k~~l~d 18 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLN 18 (484)
T ss_dssp EEEEEECSSEEEEEEEC
T ss_pred EEEEEecCcccEEEEEC
Confidence 69999999999999985
No 136
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=43.49 E-value=11 Score=40.19 Aligned_cols=18 Identities=39% Similarity=0.383 Sum_probs=16.7
Q ss_pred CEEEEecCccceEEEEEE
Q 006381 8 PAIGIDLGTTYSCVGVWQ 25 (647)
Q Consensus 8 ~vvGID~GTt~s~va~~~ 25 (647)
.++|||+|||++++++++
T Consensus 3 ~~lgiDiGtts~k~~l~d 20 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFD 20 (504)
T ss_dssp EEEEEEECSSEEEEEEEC
T ss_pred EEEEEecCCcceEEEEEC
Confidence 689999999999999985
No 137
>1nfn_A Apolipoprotein E3; lipid transport, heparin-binding, plasma protein, HDL, VLDL; 1.80A {Homo sapiens} SCOP: a.24.1.1 PDB: 1h7i_A 1ea8_A 1b68_A 1nfo_A 2kc3_A 1ya9_A
Probab=41.47 E-value=1e+02 Score=28.01 Aligned_cols=66 Identities=11% Similarity=0.094 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchhhcCCCCHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHh
Q 006381 538 HKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 617 (647)
Q Consensus 538 ~~~~~~a~n~lE~~i~~~r~~l~~~~~~~~~~~~~~~~i~~~l~~~~~wl~~~~~~~~~~~~~k~~~l~~~~~~i~~r~~ 617 (647)
.....+.|..|+.|.-++|..+... -++=+..+.-..+++...+. .++++|+..+.|...++.
T Consensus 105 ~kdlEelr~kL~P~~eEL~~~l~~~------~Eelr~~L~Py~eelr~kl~-----------~~~eeLr~~l~P~~eelk 167 (191)
T 1nfn_A 105 GADMEDVCGRLVQYRGEVQAMLGQS------TEELRVRLASHLRKLRKRLL-----------RDADDLQKRLAVYQAGAR 167 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCC------CHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHH------HHHHHHHhhhhHHHHHHHHH-----------HHHHHHHHHhHHHHHHHH
Confidence 3445667778888888888887541 23444555555555555443 356677777777776666
Q ss_pred ccc
Q 006381 618 QGA 620 (647)
Q Consensus 618 e~~ 620 (647)
++.
T Consensus 168 ~~l 170 (191)
T 1nfn_A 168 EGA 170 (191)
T ss_dssp ---
T ss_pred HHH
Confidence 633
No 138
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=41.19 E-value=53 Score=32.17 Aligned_cols=44 Identities=20% Similarity=0.263 Sum_probs=27.8
Q ss_pred cCCceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEE
Q 006381 169 AGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLL 216 (647)
Q Consensus 169 AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~ 216 (647)
.|++ +.+.|+..|||++-...... ...++++++-+|.| +-.+++
T Consensus 97 ~~~p-V~v~NDanaaalaE~~~G~~--~~~~~~~~l~~GtG-iG~gii 140 (302)
T 3epq_A 97 MXIP-VGFSTDVNAAALGEFLFGEA--XGLDSCLYITIGTG-IGAGAI 140 (302)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTT--TTCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCC--CCCCcEEEEEECCc-eEEEEE
Confidence 3776 68999999999865332211 13456788888865 334443
No 139
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=40.93 E-value=65 Score=24.08 Aligned_cols=43 Identities=9% Similarity=0.094 Sum_probs=28.1
Q ss_pred HHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhhccchhhcCCCC
Q 006381 525 VQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLA 569 (647)
Q Consensus 525 ~~~~~~~~~~d~~~~~~~~a~n~lE~~i~~~r~~l~~~~~~~~~~ 569 (647)
.++.++...+|...++......+.++.|..++..|.. |...++
T Consensus 29 ~~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDK--frSVl~ 71 (72)
T 3nmd_A 29 QEKIEELRQRDALIDELELELDQKDELIQMLQNELDK--YRSVIR 71 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhccCC
Confidence 3445566666777777777777777778888777743 555443
No 140
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=40.87 E-value=11 Score=40.28 Aligned_cols=32 Identities=13% Similarity=0.066 Sum_probs=26.5
Q ss_pred CcEEEEeCCCCCHHHHHHHHHHHHHcCCceeE
Q 006381 144 KNAVVTVPAYFNDSQRQATKDAGVIAGLNVMR 175 (647)
Q Consensus 144 ~~~ViTVPa~~~~~qr~~l~~Aa~~AGl~~~~ 175 (647)
..++.-+|..++...-..+.+++...|+++..
T Consensus 131 ~~~I~v~~~~i~~~d~a~~in~a~~~g~~i~~ 162 (607)
T 1nbw_A 131 EGWIVLIDDAVDFLDAVWWLNEALDRGINVVA 162 (607)
T ss_dssp TCEEEEECSSSCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCEEEECCCccCHHHHHHHHHHHHHcCCcEEE
Confidence 34555599999999999999999999987654
No 141
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=40.04 E-value=19 Score=35.13 Aligned_cols=61 Identities=11% Similarity=0.078 Sum_probs=35.5
Q ss_pred CCCcEEEEeCCCCCHHHHHHHHHHHH-HcCC-ceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCce
Q 006381 142 TVKNAVVTVPAYFNDSQRQATKDAGV-IAGL-NVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTF 211 (647)
Q Consensus 142 ~~~~~ViTVPa~~~~~qr~~l~~Aa~-~AGl-~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~ 211 (647)
.+..+.|++|..- ......+++..+ ..++ ..+.+.|+..||+++-. . ....+++=+|-|.-
T Consensus 59 ~i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~---g-----~~~~v~v~~GTGig 121 (291)
T 1zbs_A 59 SIRAVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALC---G-----DSEGIACILGTGSN 121 (291)
T ss_dssp TCCEEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHT---T-----TSCEEEEEESSSEE
T ss_pred cccEEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhc---C-----CCCcEEEEecCChh
Confidence 3556888899864 222223444433 3454 36889999999988631 1 12344444676653
No 142
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=39.96 E-value=44 Score=36.53 Aligned_cols=83 Identities=14% Similarity=0.143 Sum_probs=55.7
Q ss_pred eEEeecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHH-hhhCCccccCCCCchhhHHh
Q 006381 299 FYSPITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQ-DFFNGKELCKSINPDEAVAY 377 (647)
Q Consensus 299 ~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~-~~f~~~~v~~~~~p~~ava~ 377 (647)
-.+.||..+++++.. .-..+..-++-+|+.++++..+|+.|+|.|||+.---+.+.+. -.+|........--..+.-.
T Consensus 498 ~~i~itq~DIr~~ql-AKaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~iGllP~~~~~ki~~vGN~sl~ 576 (631)
T 3zyy_X 498 KDIVITEADIQNLIR-AKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAITIGLLPDIDINKFSYVGNSSLK 576 (631)
T ss_dssp SCEEEEHHHHHHHHH-HHHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHHHTSSCCSCGGGEEECSCHHHH
T ss_pred CcEEEeHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhhcCCCCCccccCEEEECcHHHH
Confidence 347889999988643 2344556677888999999999999999999998766766664 34443321111122335566
Q ss_pred HHHHH
Q 006381 378 GAAVQ 382 (647)
Q Consensus 378 GAa~~ 382 (647)
||.+.
T Consensus 577 GA~~~ 581 (631)
T 3zyy_X 577 GARKA 581 (631)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76554
No 143
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=37.14 E-value=28 Score=27.14 Aligned_cols=28 Identities=18% Similarity=0.237 Sum_probs=25.6
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHHcCCce
Q 006381 146 AVVTVPAYFNDSQRQATKDAGVIAGLNV 173 (647)
Q Consensus 146 ~ViTVPa~~~~~qr~~l~~Aa~~AGl~~ 173 (647)
-.++.|+.++..+|..+.+.|+..||..
T Consensus 34 ~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 34 MQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp SEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred cEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 4789999999999999999999999854
No 144
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=35.72 E-value=98 Score=32.66 Aligned_cols=30 Identities=27% Similarity=0.494 Sum_probs=23.9
Q ss_pred CCeeEEEEEeCCCceEEEEEEEeCC-eEEEE
Q 006381 197 GEKNVLIFDLGGGTFDVSLLTIEEG-IFEVK 226 (647)
Q Consensus 197 ~~~~vlV~D~GggT~dvsv~~~~~~-~~~v~ 226 (647)
+...+|.+|+||.++-+.++++.+. .+++.
T Consensus 78 E~G~~LalDlGGTn~Rv~~V~l~g~~~~~~~ 108 (485)
T 3o8m_A 78 ETGDFLALDLGGTNLRVVLVKLGGNHDFDTT 108 (485)
T ss_dssp CEEEEEEEEESSSEEEEEEEEEESSSCEEEE
T ss_pred cceEEEEEEecCCeEEEEEEEECCCCceEEE
Confidence 4467999999999999999999764 34433
No 145
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=35.50 E-value=56 Score=33.05 Aligned_cols=21 Identities=19% Similarity=0.145 Sum_probs=18.1
Q ss_pred CCCEEEEecCccceEEEEEEC
Q 006381 6 EGPAIGIDLGTTYSCVGVWQH 26 (647)
Q Consensus 6 ~~~vvGID~GTt~s~va~~~~ 26 (647)
+..++|||+|.|++.+++++.
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~ 48 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVRE 48 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEE
T ss_pred CCeEEEEEEccccEEEEEEec
Confidence 357999999999999999853
No 146
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=34.66 E-value=1.1e+02 Score=30.36 Aligned_cols=44 Identities=20% Similarity=0.210 Sum_probs=28.1
Q ss_pred cCCceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEE
Q 006381 169 AGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLL 216 (647)
Q Consensus 169 AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~ 216 (647)
.|++ +.+.|+..|||++....... ...+.++++-+|.| +-..++
T Consensus 131 ~~~p-v~v~NDa~aaal~E~~~g~~--~~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 131 LHLP-VWVDNDGNCAALAERKFGQG--KGLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSTT--TTCSCEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhCCC--CCCCcEEEEEECCC-EEEEEE
Confidence 3775 68899999999865332211 12456788888887 444444
No 147
>2ra1_A Surface layer protein; triple coiled-coil, S-layer protein, protein binding, sugar protein; 2.41A {Geobacillus stearothermophilus}
Probab=34.57 E-value=58 Score=32.77 Aligned_cols=69 Identities=14% Similarity=0.238 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHhhccchhhcCCCCHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHH
Q 006381 543 EAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNP 611 (647)
Q Consensus 543 ~a~n~lE~~i~~~r~~l~~~~~~~~~~~~~~~~i~~~l~~~~~wl~~~~~~~~~~~~~k~~~l~~~~~~ 611 (647)
.|+...++++|.+--.+.-++.+..+.+.+..+.+..|.++.+||..-.++...+++...+.......+
T Consensus 159 pA~~l~~~~~y~Itv~~~~~~~~~a~~~g~l~~a~~~l~~v~~~l~kv~d~FkaeL~~aa~~a~~aYea 227 (412)
T 2ra1_A 159 DAQALRDRLIYDITVAMKAREAQDAVKAGNLDKAKAALDQVNQYVSKVTDAFKAELQKAAQDAKAAYEA 227 (412)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCSTTHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHhhhHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHhhhhhhhhhcc
Confidence 355567777888777776555667777888999999999999999988888888888777666544443
No 148
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=33.02 E-value=1.7e+02 Score=30.50 Aligned_cols=52 Identities=13% Similarity=0.168 Sum_probs=32.7
Q ss_pred CCeeEEEEEeCCCceEEEEEEEeCCe---EEEEEeeCCCCC---ChHHHHHHHHHHHH
Q 006381 197 GEKNVLIFDLGGGTFDVSLLTIEEGI---FEVKATAGDTHL---GGEDFDNRMVNHFV 248 (647)
Q Consensus 197 ~~~~vlV~D~GggT~dvsv~~~~~~~---~~v~~~~~~~~l---GG~~~d~~l~~~l~ 248 (647)
+...++.+|+||.++-+.++...... ++.....-...+ ++..+=..|++.+.
T Consensus 59 E~G~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~ 116 (457)
T 2yhx_A 59 QAGSFLAIVMGGGDLEVILISLAGRQESSIXASRSLAAAMSTTAIPSDLWGNXAXSNA 116 (457)
T ss_dssp CCEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCTTTTSCSCTHHHHHHHHHHHH
T ss_pred ccceEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEEEcCCccCCCCHHHHHHHHHHHHH
Confidence 45678999999999999999987765 222222222222 55555445555443
No 149
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=32.39 E-value=30 Score=33.41 Aligned_cols=71 Identities=13% Similarity=0.193 Sum_probs=37.7
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHHHHH
Q 006381 304 TRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQA 383 (647)
Q Consensus 304 tr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a 383 (647)
-+...+.+-.-++......|+..+++.......--.|+++||.+.+ + ...++. ....+|+ -+-.|..+..
T Consensus 181 g~nT~~ai~sGi~~g~~g~i~~~i~~~~~e~~~~~~vi~TGG~a~~--l----~~~~~~---~~~~~~~-LvL~GL~~i~ 250 (268)
T 2h3g_X 181 GKNTVSAMQSGILYGYVGQVEGIVKRMKEEAKQEPKVIATGGLAKL--I----SEESNV---IDVVDPF-LTLKGLYMLY 250 (268)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCEEEEESTTHHH--H----HHHCSS---CSEECTT-HHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCCHHH--H----HhhCCC---CCEECcc-hHHHHHHHHH
Confidence 3444555555566666666655554432111112489999998743 3 334421 1233554 4667887765
Q ss_pred H
Q 006381 384 A 384 (647)
Q Consensus 384 ~ 384 (647)
.
T Consensus 251 ~ 251 (268)
T 2h3g_X 251 E 251 (268)
T ss_dssp H
T ss_pred H
Confidence 4
No 150
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=32.39 E-value=19 Score=35.28 Aligned_cols=65 Identities=11% Similarity=-0.009 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhCC--ccccCCCCchhhHHhHHHHHH
Q 006381 312 NMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNG--KELCKSINPDEAVAYGAAVQA 383 (647)
Q Consensus 312 ~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~--~~v~~~~~p~~ava~GAa~~a 383 (647)
...++++....+-..+ .... ..+++.|+|.||.+.. +.+.|++.+.. .++. .+..+.+.||++++
T Consensus 210 A~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~---~~~~a~~~GAa~la 276 (291)
T 1zxo_A 210 IRQLVMNSFIAFFRRN-VMQY-DYKQYPVHFIGSIAYC--YKEILQDAARQTGIQIG---KILQSPMEGLIQYH 276 (291)
T ss_dssp TTHHHHHHHHHHHTTT-GGGS-CTTTSCEEECSHHHHH--THHHHHHHTTTTTCCEE---EECSCTHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHH-hccc-CCCCceEEEECcHHHH--HHHHHHHHHhcCCcEEe---ecCCCHHHHHHHHH
Confidence 3345555555555555 2221 1156789999998875 55666666632 1222 34567889999875
No 151
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=31.14 E-value=7.2 Score=38.33 Aligned_cols=59 Identities=14% Similarity=0.045 Sum_probs=32.1
Q ss_pred CCcEEEEeCCCCCHHHHHHHHHHHH-HcCC-ceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCc
Q 006381 143 VKNAVVTVPAYFNDSQRQATKDAGV-IAGL-NVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGT 210 (647)
Q Consensus 143 ~~~~ViTVPa~~~~~qr~~l~~Aa~-~AGl-~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT 210 (647)
+..+.|++|..- ......+++..+ ..++ ..+.+.|+-.||+++-. . ....+++=+|-|.
T Consensus 58 i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge~---g-----~~~~v~v~~GTGi 118 (291)
T 1zxo_A 58 FNAVYFYGAGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGLC---G-----QKAGIACILGTGS 118 (291)
T ss_dssp ---CEEECTTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHTT---T-----TSCBEEEEESSSE
T ss_pred ccEEEEEcCCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhhc---C-----CCCcEEEEeCCCh
Confidence 345778888763 211123443333 3454 36889999999988542 1 1223444477776
No 152
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=30.84 E-value=1.8e+02 Score=34.17 Aligned_cols=8 Identities=13% Similarity=0.040 Sum_probs=3.0
Q ss_pred HHHHHHHH
Q 006381 159 RQATKDAG 166 (647)
Q Consensus 159 r~~l~~Aa 166 (647)
+..|+--|
T Consensus 174 K~i~~yla 181 (1080)
T 2dfs_A 174 KYAMRYFA 181 (1080)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 153
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=30.42 E-value=20 Score=34.16 Aligned_cols=47 Identities=4% Similarity=0.104 Sum_probs=22.9
Q ss_pred CHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHH
Q 006381 569 APADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAK 615 (647)
Q Consensus 569 ~~~~~~~i~~~l~~~~~wl~~~~~~~~~~~~~k~~~l~~~~~~i~~r 615 (647)
.++=+.++...++++..|+......-.+.+....++|+..+.|....
T Consensus 167 ~ee~r~kl~~~~~el~~~l~p~~~e~~~kl~~~~e~lr~~l~p~~e~ 213 (243)
T 2a01_A 167 SDELRQRLAARLEALKENGGARLAEYHAKATEHLSTLSEKAKPALED 213 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTSSSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 34445566666777777775432212222333344444444444443
No 154
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=29.97 E-value=38 Score=34.58 Aligned_cols=21 Identities=14% Similarity=0.316 Sum_probs=18.6
Q ss_pred CCEEEEecCccceEEEEEECC
Q 006381 7 GPAIGIDLGTTYSCVGVWQHD 27 (647)
Q Consensus 7 ~~vvGID~GTt~s~va~~~~g 27 (647)
+.++|||+|.|++++++++.+
T Consensus 2 ~~vlgidiGgt~ik~al~d~~ 22 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFEDE 22 (381)
T ss_dssp CEEEEEEECSSEEEEEEEETT
T ss_pred CeEEEEECCccceeEEEEecc
Confidence 368999999999999999865
No 155
>3tso_C RAB11 family-interacting protein 2; RAS GTPase fold (RAB25), vesicle trafficking, endosome, PROT transport; HET: GNP; 1.80A {Homo sapiens} PDB: 2k6s_A
Probab=28.73 E-value=1.6e+02 Score=22.03 Aligned_cols=41 Identities=20% Similarity=0.221 Sum_probs=25.6
Q ss_pred CCCCCHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhhc
Q 006381 513 KGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTV 559 (647)
Q Consensus 513 ~~~ls~~e~~~~~~~~~~~~~~d~~~~~~~~a~n~lE~~i~~~r~~l 559 (647)
+..+|.+|+-++.-+.+. ....+.....+||.||..+--.+
T Consensus 11 y~~ltreELi~l~lk~~~------~l~~k~~~v~eLEdYID~LLvRV 51 (75)
T 3tso_C 11 YRSLTYEEVLQELVKHKE------LLRRKDTHIRELEDYIDNLLVRV 51 (75)
T ss_dssp -CCCCHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 456899998776544331 22233345567999999887655
No 156
>3fcg_A F1 capsule-anchoring protein; beta barrel, beta strand swapping, cell membrane, cell outer membrane, cell projection, fimbrium, membrane; 2.85A {Yersinia pestis}
Probab=27.64 E-value=1.9e+02 Score=22.64 Aligned_cols=54 Identities=24% Similarity=0.370 Sum_probs=32.8
Q ss_pred EEEEEeecccccccCCccceeEEecCCCCCCCCCCeeEEEEEEcCCceEEEEEeeccCCcceeEEEec
Q 006381 444 VLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITN 511 (647)
Q Consensus 444 ~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~~ 511 (647)
..+.|++.....-...-.-|-|.|+++++. ...|.|.|+.++ ..|..+.+++..
T Consensus 27 A~V~v~qnG~~iy~~~VppGpF~I~dl~~~-------------~~~Gdl~V~v~e-adG~~~~~~vp~ 80 (90)
T 3fcg_A 27 ARVEVLRDGYTVSNELVPSGPFELANLPLG-------------GGSGELKVIIHE-SDGTKQVFTVPY 80 (90)
T ss_dssp EEEEEESSSCEEEEEEECSEEEEECCCC----------------CCEEEEEEEEC-TTSCEEEEEEEE
T ss_pred cEEEEEECCEEEEEeEeCCCCeEEcCCccc-------------CCceeEEEEEEE-CCCCEEEEEECc
Confidence 456667655544444455689999988753 235667777666 357777666654
No 157
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=27.62 E-value=37 Score=33.82 Aligned_cols=39 Identities=15% Similarity=0.155 Sum_probs=26.3
Q ss_pred eeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEEE
Q 006381 173 VMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLT 217 (647)
Q Consensus 173 ~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~ 217 (647)
+.....-|.|.|...+.. .. ...+++|+||.|||+..+.
T Consensus 107 ~~~aaanw~ASa~~~A~~-~~-----~~~llvDIGsTTTDIipi~ 145 (334)
T 3cet_A 107 MKVSASNWCGTAKWVSKN-IE-----ENCILVDMGSTTTDIIPIV 145 (334)
T ss_dssp GGTBCCSSHHHHHHHHHH-TC-----SSEEEEEECSSCEEEEEEE
T ss_pred HHHHhcCHHHHHHHHHHh-cC-----CCEEEEEcCcchhhhhhhc
Confidence 334566777777733222 11 2479999999999999875
No 158
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=25.62 E-value=42 Score=32.87 Aligned_cols=44 Identities=27% Similarity=0.393 Sum_probs=32.4
Q ss_pred CeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHHHHHH
Q 006381 338 HDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAA 384 (647)
Q Consensus 338 ~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~ 384 (647)
..|.|+|........+..|+. + +.++ ...++++++..|....+.
T Consensus 248 ~~v~LiG~~~L~~~Y~~AL~~-~-G~~~-~~~d~~~~~~~GL~~~~~ 291 (295)
T 3nuw_A 248 QAISLVAGSSLTSRYQQAFAA-I-GREV-SAVAGDTAFQTGIRSIAY 291 (295)
T ss_dssp SCEEEEECHHHHHHHHHHHHH-T-TCCE-EEEEHHHHHHHHHHHHHH
T ss_pred CeEEEEeCHHHHHHHHHHHHH-c-CCCc-eecCHHHHHHHHHHHHHH
Confidence 579999999888888888865 4 4544 234788888888765543
No 159
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=25.34 E-value=33 Score=33.85 Aligned_cols=20 Identities=20% Similarity=0.290 Sum_probs=17.9
Q ss_pred CCCEEEEecCccceEEEEEE
Q 006381 6 EGPAIGIDLGTTYSCVGVWQ 25 (647)
Q Consensus 6 ~~~vvGID~GTt~s~va~~~ 25 (647)
...++|||+|.|++++++++
T Consensus 6 ~~~~lgiDiGgt~i~~~l~d 25 (310)
T 3htv_A 6 HNVVAGVDMGATHIRFCLRT 25 (310)
T ss_dssp EEEEEEEEECSSEEEEEEEE
T ss_pred CCEEEEEEeCCCEEEEEEEC
Confidence 35799999999999999886
No 160
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=24.72 E-value=3.7e+02 Score=23.85 Aligned_cols=65 Identities=14% Similarity=0.186 Sum_probs=34.2
Q ss_pred CCCCHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhhccchhhcCCCCHHHHHHHHHHHHHHHHHHh
Q 006381 514 GRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLD 588 (647)
Q Consensus 514 ~~ls~~e~~~~~~~~~~~~~~d~~~~~~~~a~n~lE~~i~~~r~~l~~~~~~~~~~~~~~~~i~~~l~~~~~wl~ 588 (647)
..||+|+..++++-.+++..+ ..+.+.++.+.-.+++..+.. +..+++..+++.+.+.+++.-|.
T Consensus 66 LnLT~EQq~ql~~I~~e~r~~------~~~Lr~ql~akr~EL~aL~~a----~~~DeakI~aL~~Ei~~Lr~qL~ 130 (175)
T 3lay_A 66 SPLTTEQQATAQKIYDDYYTQ------TSALRQQLISKRYEYNALLTA----SSPDTAKINAVAKEMESLGQKLD 130 (175)
T ss_dssp --CCHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHTS----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 359999988887665555332 222233333333445444432 34466666666666655555554
No 161
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=24.61 E-value=2e+02 Score=30.14 Aligned_cols=25 Identities=40% Similarity=0.682 Sum_probs=21.6
Q ss_pred CCeeEEEEEeCCCceEEEEEEEeCC
Q 006381 197 GEKNVLIFDLGGGTFDVSLLTIEEG 221 (647)
Q Consensus 197 ~~~~vlV~D~GggT~dvsv~~~~~~ 221 (647)
+...+|.+|+||.++-|..+++.++
T Consensus 75 E~G~fLAlDlGGTNfRV~~V~L~g~ 99 (470)
T 3f9m_A 75 EVGDFLSLDLGGTNFRVMLVKVGEG 99 (470)
T ss_dssp CCEEEEEEEESSSEEEEEEEEEEC-
T ss_pred cceEEEEEEecCceEEEEEEEECCC
Confidence 4567999999999999999999764
No 162
>1gs9_A Apolipoprotein E, APOE4; lipid transport, heparin-binding, plasma, lipid binding protein; 1.7A {Homo sapiens} SCOP: a.24.1.1 PDB: 1or3_A 1or2_A 1le4_A 1bz4_A 1lpe_A 1le2_A
Probab=23.67 E-value=3.7e+02 Score=23.52 Aligned_cols=65 Identities=5% Similarity=0.107 Sum_probs=36.5
Q ss_pred CCCCHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhhccchhhcCCCCHHHHHHHHHHHHHHHHH
Q 006381 514 GRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQW 586 (647)
Q Consensus 514 ~~ls~~e~~~~~~~~~~~~~~d~~~~~~~~a~n~lE~~i~~~r~~l~~~~~~~~~~~~~~~~i~~~l~~~~~w 586 (647)
.+++.+-...+.+..+.+. .+......+.|..|+.|+.++|..+.. ..++=+.++...++++.+=
T Consensus 83 ~P~t~el~~~l~~~~e~Lr--~~L~~d~EelR~~l~p~~~el~~~l~~------~~EelR~kl~P~~eeL~~~ 147 (165)
T 1gs9_A 83 TPVAEETRARLSKELQAAQ--ARLGADMEDVRGRLVQYRGEVQAMLGQ------STEELRVRLASHLRKLRKR 147 (165)
T ss_dssp CCCCSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHTSTTC------CCHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHH
Confidence 4556555555555444442 233344566777777777777777753 1445555666666555433
No 163
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=23.37 E-value=79 Score=30.92 Aligned_cols=47 Identities=15% Similarity=0.087 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCCCcHHHHHHHHhhhC
Q 006381 312 NMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFN 361 (647)
Q Consensus 312 ~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~ 361 (647)
.....+.+...++++|+++++++.+|+.|+.-|+++++ -+.+.+.|+
T Consensus 213 ~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg 259 (317)
T 1hnj_A 213 FKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLG 259 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcC
Confidence 33445677788999999999999999999999887654 456777773
No 164
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=23.34 E-value=32 Score=37.59 Aligned_cols=24 Identities=33% Similarity=0.725 Sum_probs=22.1
Q ss_pred CCeEEEEcCCCCcHHHHHHHHhhh
Q 006381 337 VHDVVLVGGSTRIPKVQQLLQDFF 360 (647)
Q Consensus 337 i~~ViLvGG~s~~p~v~~~l~~~f 360 (647)
.+.|++|||+|.+|.+.-.|.++.
T Consensus 501 y~nilivGggski~g~~~~L~dri 524 (655)
T 4am6_A 501 YSNILIVGGSSKIPALDFILTDRI 524 (655)
T ss_dssp HTCEEEESTTCCCTTHHHHHHHHH
T ss_pred hhcEEEEcCcccCccHHHHHHHHH
Confidence 467999999999999999999887
No 165
>1kcf_A Hypothetical 30.2 KD protein C25G10.02 in chromosome I; beta-alpha-beta motif, RUVC resolvase family, hydrolase; 2.30A {Schizosaccharomyces pombe} SCOP: a.140.2.1 c.55.3.7
Probab=22.53 E-value=91 Score=29.81 Aligned_cols=33 Identities=15% Similarity=0.171 Sum_probs=24.4
Q ss_pred CCEEEEecCccceEEEEEECCeeEEEecCCCCcccceEEEEcC
Q 006381 7 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTD 49 (647)
Q Consensus 7 ~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~ 49 (647)
+.|++||+|+-|.+.|...+ +....|+++.+..
T Consensus 40 ~sIlSID~GikNlAyc~l~~----------~~~~~p~l~~W~k 72 (258)
T 1kcf_A 40 SRVLGIDLGIKNFSYCFASQ----------NEDSKVIIHNWSV 72 (258)
T ss_dssp SSEEEEEECSTTEEEEEEEE----------CTTSCEEEEEEEE
T ss_pred CcEEEEecCCCceEEEEEcc----------CCCCCCeeeccee
Confidence 38999999999999998752 2235677776643
No 166
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=21.84 E-value=4.3e+02 Score=25.27 Aligned_cols=15 Identities=27% Similarity=0.476 Sum_probs=5.8
Q ss_pred HHHHHHHHHHHHhhc
Q 006381 545 KNALENYAYNMRNTV 559 (647)
Q Consensus 545 ~n~lE~~i~~~r~~l 559 (647)
+..|..|.-++|..+
T Consensus 72 r~kL~p~~~el~~~l 86 (273)
T 3s84_A 72 RRQLTPYAQRMERVL 86 (273)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333333333333
No 167
>1vh6_A Flagellar protein FLIS; structural genomics, unknown function; HET: MSE; 2.50A {Bacillus subtilis} SCOP: a.24.19.1
Probab=21.56 E-value=2.5e+02 Score=24.08 Aligned_cols=66 Identities=11% Similarity=0.076 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHhhccchhhcCCCCHHHHHHHHHHHHHHHHHHhcC-CccCHHHHHHHHHHHHHHHHHHHHHHhc
Q 006381 542 VEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSN-QLAEADEFEDKMKELESICNPIIAKMYQ 618 (647)
Q Consensus 542 ~~a~n~lE~~i~~~r~~l~~~~~~~~~~~~~~~~i~~~l~~~~~wl~~~-~~~~~~~~~~k~~~l~~~~~~i~~r~~e 618 (647)
.+..+.....|..++..|.- + -++-+.|..+-+|+... -.|....=.+.++++..++.++..-+.+
T Consensus 53 ~~~i~KA~~Ii~eL~~sLd~---------e--geiA~nL~~LY~y~~~~L~~Ani~~D~~~ldev~~ll~~LreaW~~ 119 (145)
T 1vh6_A 53 NENLIKAQNIIQELNFTLNR---------N--IELSASMGAMYDYMYRRLVQANIKNDTGMLAEVEGYVTDFRDAWKQ 119 (145)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---------H--HHHTTHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCC---------c--hHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 34444455555566655532 1 35566666666666542 1221111134555566666666655555
No 168
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=21.46 E-value=65 Score=31.11 Aligned_cols=21 Identities=19% Similarity=0.194 Sum_probs=18.3
Q ss_pred CEEEEecCccceEEEEEE-CCe
Q 006381 8 PAIGIDLGTTYSCVGVWQ-HDR 28 (647)
Q Consensus 8 ~vvGID~GTt~s~va~~~-~g~ 28 (647)
..+.||.|+|+++.++++ ++.
T Consensus 24 M~L~IDiGNT~ik~g~~~~~~~ 45 (271)
T 2f9w_A 24 MILELDCGNSLIKWRVIEGAAR 45 (271)
T ss_dssp EEEEEEECSSCEEEEEEETTTE
T ss_pred cEEEEEeCCCeeEEEEEeCCCE
Confidence 479999999999999998 553
No 169
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=21.01 E-value=51 Score=32.15 Aligned_cols=44 Identities=23% Similarity=0.322 Sum_probs=28.0
Q ss_pred cCCceeEecChhHHHHhcccccccccCCCCeeEEEEEeCCCceEEEEE
Q 006381 169 AGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLL 216 (647)
Q Consensus 169 AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~ 216 (647)
.|++ +.+.|+..|+|++-...... ...++++++-+|.| +-.+++
T Consensus 97 ~~~p-V~v~NDa~aaal~E~~~g~~--~~~~~~~~l~~GtG-iG~giv 140 (297)
T 4htl_A 97 TGLP-VAIENDANCALLAEKWLGKG--QDLDDFLCLTIGTG-IGGGIF 140 (297)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTT--TTCSSEEEEEESSS-EEEEEE
T ss_pred HCcC-EEEecHHHHHHHHHHHhCCC--CCCCcEEEEEECcc-eEEEEE
Confidence 4776 68999999999864332211 13456788888876 344444
No 170
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=20.91 E-value=99 Score=31.72 Aligned_cols=73 Identities=22% Similarity=0.275 Sum_probs=48.7
Q ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHcCCceeEecChhHH-HHhcccccccccC----CCC-----------eeEEEEEe
Q 006381 143 VKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTA-AAIAYGLDKKATS----VGE-----------KNVLIFDL 206 (647)
Q Consensus 143 ~~~~ViTVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~A-aa~~y~~~~~~~~----~~~-----------~~vlV~D~ 206 (647)
+.++|++.|+. ...---.+.-||+++|.+.+.-+--.-| ||++||...-..- .++ ...+=+|+
T Consensus 160 V~~Iv~~tPp~-~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g~VgIDm 238 (423)
T 4gic_A 160 VPELIMAVPAP-RGELNALVLAAAYISGVDRVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFGQVGIDM 238 (423)
T ss_dssp CSEEEEECCCG-GGCCCHHHHHHHHHHTCCEEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBTTBEECC
T ss_pred CCeEEEecCCC-CCCccHHHHHHHHhcCCcEEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcCCcCccc
Confidence 56889999983 2222356889999999999998888877 5788986543210 000 11245677
Q ss_pred CCCceEEEEE
Q 006381 207 GGGTFDVSLL 216 (647)
Q Consensus 207 GggT~dvsv~ 216 (647)
=+|-+++.|+
T Consensus 239 ~AGPSEilVi 248 (423)
T 4gic_A 239 VAGPSEILVI 248 (423)
T ss_dssp CCCCCEEEEE
T ss_pred ccccceEEEE
Confidence 7777777666
No 171
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=20.72 E-value=64 Score=32.09 Aligned_cols=47 Identities=26% Similarity=0.331 Sum_probs=35.6
Q ss_pred CeEEEEcCCCCcHHHHHHHHhhhCCccccCCCCchhhHHhHHHHHHHHHc
Q 006381 338 HDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILS 387 (647)
Q Consensus 338 ~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~~~ 387 (647)
..|.|+|........+..|+. + +.++ ...+++.++..|....+..+.
T Consensus 260 ~~V~LiG~~~L~~~Y~~AL~~-~-G~~~-~~~d~d~a~~~GL~~~a~~~~ 306 (330)
T 3t69_A 260 DGVCLVGSGGLGTLYRTALES-Q-GLNV-RAVDADEAVRAGLSAAARAIW 306 (330)
T ss_dssp CEEEEEECHHHHHHHHHHHHH-T-TCEE-EEEEHHHHHHHHHHHHHHHHS
T ss_pred CeEEEEeCHHHHHHHHHHHHH-c-CCCc-eeeCHHHHHHHHHHHHHHHHH
Confidence 579999999988888888865 5 4544 345789999999876665544
No 172
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=20.07 E-value=53 Score=32.74 Aligned_cols=22 Identities=27% Similarity=0.327 Sum_probs=18.6
Q ss_pred CCEEEEecCccceEEEEEE-CCe
Q 006381 7 GPAIGIDLGTTYSCVGVWQ-HDR 28 (647)
Q Consensus 7 ~~vvGID~GTt~s~va~~~-~g~ 28 (647)
..++|||+|+|++++++++ +|.
T Consensus 30 ~~~lgiDiGgt~i~~~l~d~~G~ 52 (343)
T 2yhw_A 30 LSALAVDLGGTNLRVAIVSMKGE 52 (343)
T ss_dssp EEEEEEEECSSEEEEEEEETTSC
T ss_pred cEEEEEEECCCEEEEEEECCCCc
Confidence 4689999999999999986 443
Done!