Query 006387
Match_columns 647
No_of_seqs 513 out of 4041
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 23:41:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006387.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006387hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2h88_A Succinate dehydrogenase 100.0 5.2E-91 1.8E-95 781.9 51.0 512 86-620 16-560 (621)
2 1chu_A Protein (L-aspartate ox 100.0 5.8E-91 2E-95 774.5 50.8 519 86-628 6-532 (540)
3 2bs2_A Quinol-fumarate reducta 100.0 5.7E-91 2E-95 786.7 47.8 522 86-628 3-566 (660)
4 2wdq_A Succinate dehydrogenase 100.0 4.1E-89 1.4E-93 766.5 48.1 524 86-628 5-559 (588)
5 1kf6_A Fumarate reductase flav 100.0 2.2E-87 7.4E-92 753.9 51.8 522 86-628 3-554 (602)
6 3gyx_A Adenylylsulfate reducta 100.0 4E-85 1.4E-89 738.4 39.5 529 86-644 20-659 (662)
7 2e5v_A L-aspartate oxidase; ar 100.0 3E-77 1E-81 655.0 40.9 467 90-627 1-468 (472)
8 1jnr_A Adenylylsulfate reducta 100.0 3.6E-72 1.2E-76 636.1 42.2 525 86-646 20-640 (643)
9 1y0p_A Fumarate reductase flav 100.0 5.6E-52 1.9E-56 466.3 34.7 376 85-493 123-569 (571)
10 1d4d_A Flavocytochrome C fumar 100.0 2.3E-51 8E-56 460.3 34.7 375 86-493 124-570 (572)
11 1qo8_A Flavocytochrome C3 fuma 100.0 8.8E-51 3E-55 455.9 37.6 376 85-493 118-564 (566)
12 4at0_A 3-ketosteroid-delta4-5a 100.0 4.8E-48 1.7E-52 428.4 30.7 370 86-491 39-509 (510)
13 2i0z_A NAD(FAD)-utilizing dehy 100.0 1.1E-30 3.9E-35 284.3 24.7 357 86-493 24-444 (447)
14 2gqf_A Hypothetical protein HI 99.9 6.2E-23 2.1E-27 219.5 16.4 189 87-311 3-192 (401)
15 3v76_A Flavoprotein; structura 99.9 4.4E-21 1.5E-25 205.9 15.8 187 86-312 25-212 (417)
16 4fk1_A Putative thioredoxin re 99.7 7.9E-17 2.7E-21 165.8 15.7 49 437-493 252-300 (304)
17 4b1b_A TRXR, thioredoxin reduc 99.7 1.3E-17 4.4E-22 184.0 7.5 192 86-317 40-242 (542)
18 3nlc_A Uncharacterized protein 99.7 4.6E-15 1.6E-19 163.4 25.3 154 86-281 105-277 (549)
19 4gcm_A TRXR, thioredoxin reduc 99.7 2.4E-15 8.2E-20 155.2 19.7 52 435-494 256-307 (312)
20 3qfa_A Thioredoxin reductase 1 99.7 4.5E-17 1.5E-21 180.2 6.2 157 86-283 30-187 (519)
21 3cp8_A TRNA uridine 5-carboxym 99.7 5.5E-15 1.9E-19 163.9 22.2 154 86-282 19-175 (641)
22 3dgz_A Thioredoxin reductase 2 99.6 9.8E-17 3.4E-21 176.3 5.7 156 86-282 4-160 (488)
23 3lad_A Dihydrolipoamide dehydr 99.6 6.3E-16 2.2E-20 169.4 8.0 39 88-126 3-42 (476)
24 3urh_A Dihydrolipoyl dehydroge 99.6 1.1E-15 3.8E-20 168.1 9.2 39 86-124 23-62 (491)
25 3dgh_A TRXR-1, thioredoxin red 99.6 3.7E-16 1.3E-20 171.5 5.3 156 86-283 7-164 (483)
26 4a5l_A Thioredoxin reductase; 99.6 8.1E-16 2.8E-20 158.7 7.4 51 436-494 263-313 (314)
27 3o0h_A Glutathione reductase; 99.6 2.1E-15 7.1E-20 165.6 8.2 142 87-282 25-167 (484)
28 1ojt_A Surface protein; redox- 99.6 5.2E-15 1.8E-19 162.3 11.1 38 87-124 5-43 (482)
29 3lzw_A Ferredoxin--NADP reduct 99.6 9.6E-16 3.3E-20 159.2 4.6 116 87-280 6-122 (332)
30 3f8d_A Thioredoxin reductase ( 99.6 1.2E-15 4E-20 157.8 4.6 53 436-494 266-318 (323)
31 3dk9_A Grase, GR, glutathione 99.5 5E-15 1.7E-19 162.3 7.7 36 86-121 18-54 (478)
32 3ab1_A Ferredoxin--NADP reduct 99.5 1.8E-14 6E-19 151.9 10.9 118 87-281 13-131 (360)
33 1dxl_A Dihydrolipoamide dehydr 99.5 7.8E-15 2.7E-19 160.4 6.8 38 87-124 5-43 (470)
34 3l8k_A Dihydrolipoyl dehydroge 99.5 3.2E-14 1.1E-18 155.3 11.5 37 88-124 4-41 (466)
35 2zbw_A Thioredoxin reductase; 99.5 8.7E-15 3E-19 152.5 6.6 53 436-494 266-318 (335)
36 2hqm_A GR, grase, glutathione 99.5 1.3E-14 4.4E-19 159.0 8.1 34 87-120 10-44 (479)
37 2a8x_A Dihydrolipoyl dehydroge 99.5 1.5E-14 5E-19 158.0 8.4 33 88-120 3-36 (464)
38 4dna_A Probable glutathione re 99.5 5.5E-15 1.9E-19 161.3 4.6 34 87-120 4-38 (463)
39 3ces_A MNMG, tRNA uridine 5-ca 99.5 1.8E-12 6.1E-17 143.9 23.9 153 87-282 27-182 (651)
40 2qae_A Lipoamide, dihydrolipoy 99.5 3.3E-14 1.1E-18 155.4 9.6 37 88-124 2-39 (468)
41 1fec_A Trypanothione reductase 99.5 3.7E-14 1.3E-18 155.7 9.6 30 88-117 3-34 (490)
42 4eqs_A Coenzyme A disulfide re 99.5 1.5E-14 5.2E-19 156.4 5.5 50 228-284 70-119 (437)
43 2wpf_A Trypanothione reductase 99.5 6.3E-14 2.2E-18 154.0 10.1 32 87-118 6-39 (495)
44 1ebd_A E3BD, dihydrolipoamide 99.5 5E-14 1.7E-18 153.4 9.1 33 88-120 3-36 (455)
45 1zmd_A Dihydrolipoyl dehydroge 99.4 2E-13 7E-18 149.3 11.0 39 86-124 4-43 (474)
46 3r9u_A Thioredoxin reductase; 99.4 1E-13 3.5E-18 142.7 7.5 51 436-494 263-313 (315)
47 3fbs_A Oxidoreductase; structu 99.4 9.8E-14 3.4E-18 141.5 7.3 50 436-494 243-293 (297)
48 3oz2_A Digeranylgeranylglycero 99.4 7.9E-12 2.7E-16 132.7 22.3 147 86-281 2-162 (397)
49 2eq6_A Pyruvate dehydrogenase 99.4 2.2E-13 7.4E-18 148.6 10.1 33 88-120 6-39 (464)
50 2r9z_A Glutathione amide reduc 99.4 4.8E-13 1.6E-17 145.8 12.8 33 88-120 4-37 (463)
51 1v59_A Dihydrolipoamide dehydr 99.4 1.7E-14 5.8E-19 158.1 1.1 38 87-124 4-42 (478)
52 3jsk_A Cypbp37 protein; octame 99.4 2.8E-12 9.6E-17 132.0 17.4 150 86-283 77-253 (344)
53 1rp0_A ARA6, thiazole biosynth 99.4 2.1E-12 7.3E-17 131.2 15.8 143 87-281 38-191 (284)
54 1onf_A GR, grase, glutathione 99.4 5.3E-14 1.8E-18 154.9 4.1 33 88-120 2-35 (500)
55 3ics_A Coenzyme A-disulfide re 99.4 6.4E-13 2.2E-17 149.4 12.9 36 87-122 35-73 (588)
56 4a9w_A Monooxygenase; baeyer-v 99.4 9.4E-13 3.2E-17 137.8 13.3 130 88-282 3-133 (357)
57 3ic9_A Dihydrolipoamide dehydr 99.4 8.5E-15 2.9E-19 160.9 -3.0 34 87-120 7-41 (492)
58 3da1_A Glycerol-3-phosphate de 99.4 1.9E-12 6.6E-17 144.2 16.0 65 212-281 168-232 (561)
59 3itj_A Thioredoxin reductase 1 99.4 1.4E-13 4.9E-18 143.1 6.4 51 436-494 285-336 (338)
60 1ges_A Glutathione reductase; 99.4 2.6E-13 8.7E-18 147.4 8.3 33 88-120 4-37 (450)
61 1mo9_A ORF3; nucleotide bindin 99.4 2.1E-12 7.1E-17 142.9 15.1 39 86-124 41-80 (523)
62 3iwa_A FAD-dependent pyridine 99.4 1.2E-12 4.2E-17 143.0 13.0 35 88-122 3-40 (472)
63 1xdi_A RV3303C-LPDA; reductase 99.4 2.9E-13 9.8E-18 149.1 7.7 33 88-120 2-38 (499)
64 3oc4_A Oxidoreductase, pyridin 99.4 8.5E-14 2.9E-18 151.4 2.7 35 89-123 3-40 (452)
65 2x8g_A Thioredoxin glutathione 99.4 4.2E-13 1.4E-17 151.2 7.8 34 86-119 105-139 (598)
66 3kd9_A Coenzyme A disulfide re 99.4 2.6E-12 8.8E-17 139.5 13.4 35 88-122 3-40 (449)
67 3fpz_A Thiazole biosynthetic e 99.4 1.2E-12 4.3E-17 135.8 10.1 55 437-493 271-325 (326)
68 3klj_A NAD(FAD)-dependent dehy 99.4 1.7E-12 5.9E-17 137.7 11.1 36 87-122 8-44 (385)
69 2q7v_A Thioredoxin reductase; 99.3 4.8E-13 1.7E-17 138.6 5.8 52 436-495 263-314 (325)
70 3dme_A Conserved exported prot 99.3 3.3E-12 1.1E-16 134.3 12.3 181 88-281 4-209 (369)
71 2cdu_A NADPH oxidase; flavoenz 99.3 2.3E-13 8E-18 147.9 3.1 34 89-122 1-37 (452)
72 2gjc_A Thiazole biosynthetic e 99.3 1.7E-11 5.8E-16 125.5 16.6 148 86-281 63-239 (326)
73 1fl2_A Alkyl hydroperoxide red 99.3 6.3E-13 2.1E-17 136.7 5.8 51 436-494 256-306 (310)
74 2q0l_A TRXR, thioredoxin reduc 99.3 7.1E-13 2.4E-17 136.4 5.8 50 436-493 260-309 (311)
75 3cty_A Thioredoxin reductase; 99.3 1.3E-10 4.6E-15 119.8 22.8 50 436-493 267-316 (319)
76 3ntd_A FAD-dependent pyridine 99.3 5.7E-12 1.9E-16 141.0 13.2 34 89-122 2-38 (565)
77 1zk7_A HGII, reductase, mercur 99.3 2.3E-12 8E-17 140.6 9.5 35 87-121 3-38 (467)
78 3cgb_A Pyridine nucleotide-dis 99.3 5.3E-12 1.8E-16 138.2 12.2 34 89-122 37-73 (480)
79 1lvl_A Dihydrolipoamide dehydr 99.3 4.8E-13 1.6E-17 145.6 3.4 34 87-120 4-38 (458)
80 2zxi_A TRNA uridine 5-carboxym 99.3 9.4E-12 3.2E-16 137.6 13.2 153 87-282 26-181 (637)
81 2rgh_A Alpha-glycerophosphate 99.3 2.7E-11 9.3E-16 135.1 16.8 190 87-282 31-251 (571)
82 2yqu_A 2-oxoglutarate dehydrog 99.3 9E-13 3.1E-17 143.4 4.1 37 88-124 1-38 (455)
83 1y56_B Sarcosine oxidase; dehy 99.3 3.5E-11 1.2E-15 127.5 16.1 180 87-281 4-205 (382)
84 2gag_B Heterotetrameric sarcos 99.3 7.4E-11 2.5E-15 125.9 18.6 181 86-281 19-230 (405)
85 2qcu_A Aerobic glycerol-3-phos 99.3 2.8E-11 9.6E-16 133.1 15.3 181 88-282 3-211 (501)
86 1nhp_A NADH peroxidase; oxidor 99.3 1.2E-12 4E-17 142.2 3.9 34 89-122 1-37 (447)
87 1vdc_A NTR, NADPH dependent th 99.3 2.4E-12 8.2E-17 133.7 5.9 51 436-494 273-324 (333)
88 3ps9_A TRNA 5-methylaminomethy 99.3 1.1E-10 3.6E-15 133.4 20.0 177 87-285 271-477 (676)
89 1xhc_A NADH oxidase /nitrite r 99.3 8.1E-12 2.8E-16 131.8 9.9 35 87-121 7-41 (367)
90 3qvp_A Glucose oxidase; oxidor 99.3 5.8E-11 2E-15 131.8 16.7 62 219-281 231-293 (583)
91 3pvc_A TRNA 5-methylaminomethy 99.2 2.2E-10 7.4E-15 131.0 21.2 177 87-284 263-472 (689)
92 3atr_A Conserved archaeal prot 99.2 5.7E-11 1.9E-15 129.1 15.5 152 87-284 5-165 (453)
93 3lxd_A FAD-dependent pyridine 99.2 2.9E-11 9.8E-16 129.9 12.9 52 437-490 265-320 (415)
94 1hyu_A AHPF, alkyl hydroperoxi 99.2 2.1E-10 7.3E-15 126.6 19.3 51 436-494 467-517 (521)
95 3q9t_A Choline dehydrogenase a 99.2 4.3E-11 1.5E-15 133.0 13.3 54 225-281 216-270 (577)
96 1ryi_A Glycine oxidase; flavop 99.2 4E-11 1.4E-15 126.9 12.6 49 86-134 15-64 (382)
97 2ywl_A Thioredoxin reductase r 99.2 4.4E-10 1.5E-14 105.7 18.5 107 89-280 2-109 (180)
98 1trb_A Thioredoxin reductase; 99.2 5.7E-11 1.9E-15 122.5 12.9 51 436-494 260-315 (320)
99 2gag_A Heterotetrameric sarcos 99.2 4E-10 1.4E-14 133.0 20.6 38 87-124 127-165 (965)
100 2v3a_A Rubredoxin reductase; a 99.2 3E-11 1E-15 128.3 10.0 33 88-120 4-39 (384)
101 3dje_A Fructosyl amine: oxygen 99.2 5.6E-10 1.9E-14 120.6 20.1 63 212-284 159-224 (438)
102 3nyc_A D-arginine dehydrogenas 99.2 3E-11 1E-15 127.7 9.5 175 86-281 7-209 (381)
103 3cgv_A Geranylgeranyl reductas 99.2 9.6E-11 3.3E-15 124.6 13.1 144 87-281 3-162 (397)
104 3axb_A Putative oxidoreductase 99.2 1.8E-10 6.1E-15 124.9 15.0 49 87-135 22-73 (448)
105 2bc0_A NADH oxidase; flavoprot 99.2 3.1E-11 1.1E-15 132.5 8.4 35 88-122 35-73 (490)
106 2gqw_A Ferredoxin reductase; f 99.2 2.9E-10 9.8E-15 121.7 15.5 35 87-121 6-43 (408)
107 2gf3_A MSOX, monomeric sarcosi 99.2 3.3E-10 1.1E-14 120.1 15.7 178 88-282 3-206 (389)
108 2a87_A TRXR, TR, thioredoxin r 99.2 1.9E-11 6.5E-16 127.2 5.8 52 436-495 266-318 (335)
109 2gmh_A Electron transfer flavo 99.2 1.7E-10 5.8E-15 129.1 13.6 157 86-282 33-218 (584)
110 3e1t_A Halogenase; flavoprotei 99.1 5.1E-10 1.7E-14 123.5 17.0 160 86-283 5-174 (512)
111 1y56_A Hypothetical protein PH 99.1 3.7E-10 1.3E-14 123.9 15.3 117 86-284 106-222 (493)
112 3ef6_A Toluene 1,2-dioxygenase 99.1 2.2E-10 7.4E-15 122.8 12.7 52 437-490 255-308 (410)
113 3fg2_P Putative rubredoxin red 99.1 1.6E-10 5.3E-15 123.6 11.3 53 437-490 255-309 (404)
114 2oln_A NIKD protein; flavoprot 99.1 6.9E-10 2.4E-14 118.2 16.3 179 88-281 4-208 (397)
115 3fim_B ARYL-alcohol oxidase; A 99.1 9.7E-11 3.3E-15 129.8 9.8 60 218-281 211-276 (566)
116 1q1r_A Putidaredoxin reductase 99.1 1.3E-10 4.5E-15 125.3 10.4 34 88-121 4-40 (431)
117 2uzz_A N-methyl-L-tryptophan o 99.1 6.7E-10 2.3E-14 117.0 14.7 176 88-283 2-206 (372)
118 3nix_A Flavoprotein/dehydrogen 99.1 4.5E-10 1.6E-14 120.5 13.6 155 87-281 4-166 (421)
119 3ihg_A RDME; flavoenzyme, anth 99.1 9.5E-10 3.2E-14 122.0 15.7 163 87-282 4-184 (535)
120 3i3l_A Alkylhalidase CMLS; fla 99.1 1E-09 3.5E-14 122.6 15.5 156 86-281 21-188 (591)
121 1pj5_A N,N-dimethylglycine oxi 99.0 2.6E-09 8.8E-14 124.8 17.7 179 88-282 4-208 (830)
122 2vdc_G Glutamate synthase [NAD 99.0 2.9E-10 9.9E-15 123.1 8.3 50 436-494 395-445 (456)
123 3c4n_A Uncharacterized protein 99.0 4.8E-10 1.7E-14 119.8 8.6 45 87-131 35-82 (405)
124 2cul_A Glucose-inhibited divis 99.0 3.1E-09 1E-13 104.4 12.5 122 88-281 3-125 (232)
125 2bry_A NEDD9 interacting prote 99.0 1.4E-09 4.7E-14 119.4 11.0 141 86-283 90-232 (497)
126 3t37_A Probable dehydrogenase; 98.9 1.8E-08 6.2E-13 111.4 19.2 56 220-281 216-271 (526)
127 3c96_A Flavin-containing monoo 98.9 5.9E-09 2E-13 111.5 14.2 156 88-282 4-170 (410)
128 1k0i_A P-hydroxybenzoate hydro 98.9 1.5E-09 5.2E-14 115.4 9.0 63 214-283 103-165 (394)
129 2r0c_A REBC; flavin adenine di 98.9 1.8E-08 6.1E-13 112.0 17.9 156 87-282 25-197 (549)
130 1gpe_A Protein (glucose oxidas 98.9 2.1E-08 7.1E-13 112.1 17.7 62 219-281 235-297 (587)
131 3h8l_A NADH oxidase; membrane 98.9 1.8E-09 6E-14 115.6 8.6 50 436-492 285-335 (409)
132 2qa1_A PGAE, polyketide oxygen 98.9 1.3E-08 4.5E-13 111.6 15.5 149 85-282 8-166 (500)
133 3fmw_A Oxygenase; mithramycin, 98.9 8.9E-09 3.1E-13 114.6 14.2 155 87-282 48-208 (570)
134 2qa2_A CABE, polyketide oxygen 98.9 1.7E-08 5.8E-13 110.7 15.9 148 86-282 10-167 (499)
135 2x3n_A Probable FAD-dependent 98.9 1.1E-08 3.8E-13 108.9 13.9 156 87-282 5-167 (399)
136 3g5s_A Methylenetetrahydrofola 98.9 5.8E-08 2E-12 100.3 18.0 33 89-121 2-35 (443)
137 4g6h_A Rotenone-insensitive NA 98.9 1.1E-08 3.9E-13 112.0 13.5 33 88-120 42-75 (502)
138 1m6i_A Programmed cell death p 98.9 1.1E-09 3.7E-14 120.1 4.7 37 86-122 9-48 (493)
139 2jbv_A Choline oxidase; alcoho 98.8 2E-08 6.8E-13 111.3 14.7 61 218-281 212-273 (546)
140 3ka7_A Oxidoreductase; structu 98.8 9.4E-08 3.2E-12 102.5 18.1 57 214-281 196-252 (425)
141 3rp8_A Flavoprotein monooxygen 98.8 2E-08 6.8E-13 107.2 12.6 153 86-282 21-182 (407)
142 3sx6_A Sulfide-quinone reducta 98.8 1.2E-08 4E-13 110.2 10.3 58 436-495 283-346 (437)
143 2vou_A 2,6-dihydroxypyridine h 98.8 3.5E-08 1.2E-12 105.0 13.8 146 87-282 4-154 (397)
144 1c0p_A D-amino acid oxidase; a 98.8 1.9E-08 6.4E-13 105.7 10.6 38 87-124 5-43 (363)
145 1ju2_A HydroxynitrIle lyase; f 98.8 1.1E-08 3.8E-13 113.1 8.8 54 226-281 205-261 (536)
146 1kdg_A CDH, cellobiose dehydro 98.8 2.7E-08 9.4E-13 110.4 11.9 60 218-281 199-261 (546)
147 2weu_A Tryptophan 5-halogenase 98.7 5.3E-08 1.8E-12 107.2 14.0 62 213-284 172-233 (511)
148 3pl8_A Pyranose 2-oxidase; sub 98.7 7.2E-08 2.5E-12 108.3 15.1 55 226-282 271-325 (623)
149 3alj_A 2-methyl-3-hydroxypyrid 98.7 4.8E-08 1.7E-12 103.2 13.0 147 87-282 10-161 (379)
150 1gte_A Dihydropyrimidine dehyd 98.7 6.8E-09 2.3E-13 123.4 7.0 48 437-493 460-508 (1025)
151 2aqj_A Tryptophan halogenase, 98.7 8.5E-08 2.9E-12 106.3 15.1 62 213-284 164-225 (538)
152 2dkh_A 3-hydroxybenzoate hydro 98.7 5.2E-08 1.8E-12 110.2 13.5 69 213-282 140-212 (639)
153 1yvv_A Amine oxidase, flavin-c 98.7 5.3E-08 1.8E-12 100.8 12.4 38 88-125 2-40 (336)
154 3g3e_A D-amino-acid oxidase; F 98.7 3.8E-09 1.3E-13 110.4 3.3 47 89-135 1-54 (351)
155 1n4w_A CHOD, cholesterol oxida 98.7 9.4E-08 3.2E-12 104.9 14.5 60 219-281 226-288 (504)
156 4dgk_A Phytoene dehydrogenase; 98.7 2.3E-07 7.9E-12 101.7 17.2 57 214-280 221-277 (501)
157 2e4g_A Tryptophan halogenase; 98.7 1.7E-07 5.7E-12 104.2 16.0 62 213-283 193-254 (550)
158 3h28_A Sulfide-quinone reducta 98.7 9.8E-09 3.4E-13 110.5 5.8 58 436-495 271-335 (430)
159 2pyx_A Tryptophan halogenase; 98.7 1.9E-07 6.6E-12 103.1 15.9 63 213-284 174-236 (526)
160 2xve_A Flavin-containing monoo 98.7 1.9E-07 6.5E-12 101.4 14.5 65 213-281 100-166 (464)
161 1coy_A Cholesterol oxidase; ox 98.6 2.8E-07 9.6E-12 101.2 15.2 60 219-281 231-293 (507)
162 3nrn_A Uncharacterized protein 98.6 1.9E-07 6.6E-12 100.0 13.6 55 214-281 189-243 (421)
163 3s5w_A L-ornithine 5-monooxyge 98.6 6.1E-07 2.1E-11 97.3 15.8 37 87-123 29-71 (463)
164 1pn0_A Phenol 2-monooxygenase; 98.6 2.4E-07 8.3E-12 105.0 12.5 35 87-121 7-47 (665)
165 2xdo_A TETX2 protein; tetracyc 98.6 2.8E-07 9.6E-12 98.0 12.1 36 87-122 25-61 (398)
166 3qj4_A Renalase; FAD/NAD(P)-bi 98.5 6.4E-07 2.2E-11 93.0 13.6 36 89-124 2-41 (342)
167 3gwf_A Cyclohexanone monooxyge 98.5 3.2E-07 1.1E-11 101.3 11.8 135 87-281 7-147 (540)
168 2gv8_A Monooxygenase; FMO, FAD 98.5 1.3E-06 4.6E-11 94.2 16.1 39 87-125 5-46 (447)
169 4ap3_A Steroid monooxygenase; 98.5 2.9E-07 9.9E-12 101.9 10.6 39 86-124 19-58 (549)
170 3d1c_A Flavin-containing putat 98.5 4.6E-07 1.6E-11 95.0 11.6 33 88-120 4-38 (369)
171 3k7m_X 6-hydroxy-L-nicotine ox 98.5 9.6E-07 3.3E-11 94.8 14.0 39 89-127 2-41 (431)
172 1w4x_A Phenylacetone monooxyge 98.5 5E-07 1.7E-11 100.1 12.0 39 86-124 14-53 (542)
173 3hyw_A Sulfide-quinone reducta 98.5 5.7E-07 1.9E-11 96.7 11.7 58 437-496 273-336 (430)
174 3kkj_A Amine oxidase, flavin-c 98.5 1E-07 3.5E-12 94.6 5.0 38 88-125 2-40 (336)
175 3vrd_B FCCB subunit, flavocyto 98.4 3.3E-06 1.1E-10 89.7 15.3 54 436-495 271-326 (401)
176 3uox_A Otemo; baeyer-villiger 98.4 7.1E-07 2.4E-11 98.7 10.3 38 87-124 8-46 (545)
177 4gut_A Lysine-specific histone 98.4 7.8E-06 2.7E-10 93.7 18.6 38 87-124 335-373 (776)
178 4hb9_A Similarities with proba 98.3 1.8E-06 6.3E-11 91.6 11.6 34 89-122 2-36 (412)
179 3nks_A Protoporphyrinogen oxid 98.3 1.7E-06 5.8E-11 94.1 9.3 39 89-127 3-44 (477)
180 3k30_A Histamine dehydrogenase 98.2 1.1E-05 3.9E-10 91.8 14.1 41 86-126 389-430 (690)
181 4b63_A L-ornithine N5 monooxyg 98.1 3.3E-05 1.1E-09 84.5 16.0 69 213-282 144-215 (501)
182 3lov_A Protoporphyrinogen oxid 98.1 6.9E-06 2.3E-10 89.3 9.8 38 88-125 4-44 (475)
183 4gde_A UDP-galactopyranose mut 98.1 1.7E-06 6E-11 94.9 4.8 41 86-126 8-50 (513)
184 2bcg_G Secretory pathway GDP d 97.9 6.2E-06 2.1E-10 89.2 5.5 58 214-281 242-300 (453)
185 1trb_A Thioredoxin reductase; 97.9 0.0001 3.5E-09 75.2 12.9 100 89-281 146-247 (320)
186 3hdq_A UDP-galactopyranose mut 97.8 1.1E-05 3.7E-10 85.1 4.9 42 86-127 27-69 (397)
187 1fl2_A Alkyl hydroperoxide red 97.8 0.00023 7.8E-09 72.2 13.8 54 224-281 189-242 (310)
188 3itj_A Thioredoxin reductase 1 97.8 0.00023 7.8E-09 73.0 13.7 97 89-281 174-271 (338)
189 1v59_A Dihydrolipoamide dehydr 97.8 0.00025 8.4E-09 77.1 14.5 102 89-280 184-286 (478)
190 1v0j_A UDP-galactopyranose mut 97.7 1.7E-05 5.6E-10 84.3 4.8 41 87-127 6-48 (399)
191 2yg5_A Putrescine oxidase; oxi 97.7 1.9E-05 6.5E-10 85.2 4.9 40 87-126 4-44 (453)
192 2jae_A L-amino acid oxidase; o 97.7 2.1E-05 7.3E-10 85.7 5.0 40 87-126 10-50 (489)
193 1i8t_A UDP-galactopyranose mut 97.7 1.9E-05 6.5E-10 82.8 4.2 38 89-126 2-40 (367)
194 1s3e_A Amine oxidase [flavin-c 97.7 2.7E-05 9.2E-10 85.7 5.4 39 88-126 4-43 (520)
195 3cty_A Thioredoxin reductase; 97.7 0.00026 8.9E-09 72.2 12.4 50 228-281 203-252 (319)
196 2q0l_A TRXR, thioredoxin reduc 97.7 0.00049 1.7E-08 69.8 14.3 50 228-281 192-241 (311)
197 2ivd_A PPO, PPOX, protoporphyr 97.7 2.9E-05 9.8E-10 84.4 5.0 40 87-126 15-55 (478)
198 2e1m_A L-glutamate oxidase; L- 97.6 3.1E-05 1.1E-09 81.0 4.9 40 87-126 43-84 (376)
199 2q7v_A Thioredoxin reductase; 97.6 0.00046 1.6E-08 70.5 13.7 51 226-281 199-249 (325)
200 3p1w_A Rabgdi protein; GDI RAB 97.6 3E-05 1E-09 83.5 4.7 58 214-280 256-313 (475)
201 2eq6_A Pyruvate dehydrogenase 97.6 0.00031 1.1E-08 76.0 12.6 33 89-121 170-203 (464)
202 3lxd_A FAD-dependent pyridine 97.6 0.00044 1.5E-08 73.5 13.5 98 89-281 153-251 (415)
203 3fg2_P Putative rubredoxin red 97.6 0.00045 1.5E-08 73.2 13.3 98 89-281 143-241 (404)
204 1rsg_A FMS1 protein; FAD bindi 97.6 3.4E-05 1.2E-09 84.8 4.7 41 86-126 6-48 (516)
205 3dgz_A Thioredoxin reductase 2 97.6 0.00066 2.3E-08 73.9 15.0 98 89-278 186-284 (488)
206 3s5w_A L-ornithine 5-monooxyge 97.6 0.0011 3.8E-08 71.4 16.5 146 88-280 227-376 (463)
207 1ebd_A E3BD, dihydrolipoamide 97.6 0.0005 1.7E-08 74.1 13.6 33 89-121 171-204 (455)
208 1d5t_A Guanine nucleotide diss 97.6 6.1E-05 2.1E-09 80.8 6.2 57 214-281 234-290 (433)
209 2b9w_A Putative aminooxidase; 97.6 5.7E-05 1.9E-09 80.6 5.9 40 87-126 5-46 (424)
210 2vvm_A Monoamine oxidase N; FA 97.6 3.9E-05 1.3E-09 83.7 4.6 39 88-126 39-78 (495)
211 1mo9_A ORF3; nucleotide bindin 97.6 0.00061 2.1E-08 74.8 14.0 100 89-280 215-315 (523)
212 1hyu_A AHPF, alkyl hydroperoxi 97.5 0.00049 1.7E-08 75.6 13.0 54 224-281 400-453 (521)
213 3ab1_A Ferredoxin--NADP reduct 97.5 0.00043 1.5E-08 71.9 12.1 49 224-278 212-260 (360)
214 3ihm_A Styrene monooxygenase A 97.5 4E-05 1.4E-09 82.2 3.9 34 87-120 21-55 (430)
215 2zbw_A Thioredoxin reductase; 97.5 0.00078 2.7E-08 69.1 13.5 99 89-281 153-252 (335)
216 1nhp_A NADH peroxidase; oxidor 97.5 0.00039 1.3E-08 74.8 11.6 34 88-121 149-183 (447)
217 3dgh_A TRXR-1, thioredoxin red 97.5 0.00071 2.4E-08 73.5 13.7 98 89-278 188-286 (483)
218 3i6d_A Protoporphyrinogen oxid 97.5 3.7E-05 1.3E-09 83.1 3.4 38 88-125 5-49 (470)
219 1vdc_A NTR, NADPH dependent th 97.5 0.00095 3.3E-08 68.3 14.0 52 228-281 208-259 (333)
220 2v3a_A Rubredoxin reductase; a 97.5 0.00053 1.8E-08 72.1 12.2 33 89-121 146-179 (384)
221 3urh_A Dihydrolipoyl dehydroge 97.5 0.00069 2.3E-08 73.8 13.5 98 89-278 199-297 (491)
222 1zmd_A Dihydrolipoyl dehydroge 97.5 0.00071 2.4E-08 73.3 13.5 33 89-121 179-212 (474)
223 1sez_A Protoporphyrinogen oxid 97.5 5.8E-05 2E-09 82.5 4.4 40 87-126 12-52 (504)
224 3f8d_A Thioredoxin reductase ( 97.5 0.001 3.5E-08 67.5 13.5 95 89-280 155-250 (323)
225 3dk9_A Grase, GR, glutathione 97.5 0.001 3.4E-08 72.2 14.0 33 89-121 188-221 (478)
226 2bi7_A UDP-galactopyranose mut 97.4 6.7E-05 2.3E-09 79.1 4.3 39 88-126 3-42 (384)
227 3r9u_A Thioredoxin reductase; 97.4 0.00085 2.9E-08 67.9 12.5 49 228-281 196-244 (315)
228 4dsg_A UDP-galactopyranose mut 97.4 0.00011 3.8E-09 79.9 6.1 42 87-128 8-51 (484)
229 2yqu_A 2-oxoglutarate dehydrog 97.4 0.00052 1.8E-08 74.0 11.2 33 89-121 168-201 (455)
230 3c4a_A Probable tryptophan hyd 97.4 6.7E-05 2.3E-09 79.0 3.9 34 89-122 1-37 (381)
231 2hqm_A GR, grase, glutathione 97.4 0.00073 2.5E-08 73.3 12.1 33 89-121 186-219 (479)
232 1q1r_A Putidaredoxin reductase 97.4 0.00091 3.1E-08 71.5 12.5 33 89-121 150-183 (431)
233 1ges_A Glutathione reductase; 97.4 0.00068 2.3E-08 72.9 11.5 33 89-121 168-201 (450)
234 1dxl_A Dihydrolipoamide dehydr 97.4 0.00065 2.2E-08 73.5 11.3 33 89-121 178-211 (470)
235 2r9z_A Glutathione amide reduc 97.4 0.00092 3.1E-08 72.2 12.3 33 89-121 167-200 (463)
236 2iid_A L-amino-acid oxidase; f 97.3 0.00011 3.7E-09 80.3 4.6 40 87-126 32-72 (498)
237 2a8x_A Dihydrolipoyl dehydroge 97.3 0.0013 4.6E-08 70.9 13.0 33 89-121 172-205 (464)
238 3cgb_A Pyridine nucleotide-dis 97.3 0.0012 4.3E-08 71.5 12.2 34 88-121 186-220 (480)
239 2cdu_A NADPH oxidase; flavoenz 97.3 0.0013 4.5E-08 70.7 12.2 33 89-121 150-183 (452)
240 2qae_A Lipoamide, dihydrolipoy 97.3 0.0017 5.8E-08 70.1 12.8 33 89-121 175-208 (468)
241 1lvl_A Dihydrolipoamide dehydr 97.3 0.00072 2.5E-08 72.9 9.8 33 89-121 172-205 (458)
242 3qfa_A Thioredoxin reductase 1 97.2 0.0032 1.1E-07 69.0 15.0 31 89-119 211-242 (519)
243 1onf_A GR, grase, glutathione 97.2 0.0016 5.4E-08 71.1 12.4 33 89-121 177-210 (500)
244 2a87_A TRXR, TR, thioredoxin r 97.2 0.0011 3.7E-08 68.2 10.2 49 228-281 204-252 (335)
245 3ic9_A Dihydrolipoamide dehydr 97.2 0.0029 9.8E-08 68.9 13.9 33 89-121 175-208 (492)
246 1fec_A Trypanothione reductase 97.2 0.0018 6E-08 70.5 12.0 33 89-121 188-224 (490)
247 2wpf_A Trypanothione reductase 97.2 0.0018 6.3E-08 70.4 12.1 33 89-121 192-228 (495)
248 3oc4_A Oxidoreductase, pyridin 97.2 0.0026 8.8E-08 68.4 13.1 33 89-121 148-181 (452)
249 3lad_A Dihydrolipoamide dehydr 97.2 0.0033 1.1E-07 68.0 14.0 33 89-121 181-214 (476)
250 2bc0_A NADH oxidase; flavoprot 97.2 0.0018 6.2E-08 70.4 11.8 33 89-121 195-228 (490)
251 3ef6_A Toluene 1,2-dioxygenase 97.1 0.00097 3.3E-08 70.8 9.1 33 89-121 144-177 (410)
252 1xdi_A RV3303C-LPDA; reductase 97.1 0.0038 1.3E-07 68.0 13.6 33 89-121 183-216 (499)
253 1o94_A Tmadh, trimethylamine d 97.1 0.00031 1.1E-08 80.3 5.1 39 87-125 388-427 (729)
254 4dna_A Probable glutathione re 97.1 0.0028 9.6E-08 68.3 12.3 33 88-120 170-203 (463)
255 3lzw_A Ferredoxin--NADP reduct 97.1 0.0028 9.6E-08 64.5 11.7 52 437-494 265-316 (332)
256 1ps9_A 2,4-dienoyl-COA reducta 97.1 0.00034 1.2E-08 79.3 5.2 39 87-125 372-411 (671)
257 1b37_A Protein (polyamine oxid 97.0 0.00042 1.4E-08 75.0 5.2 40 87-126 3-44 (472)
258 3iwa_A FAD-dependent pyridine 97.0 0.0034 1.1E-07 67.9 12.3 32 89-120 160-193 (472)
259 2gqw_A Ferredoxin reductase; f 97.0 0.0042 1.4E-07 65.8 12.6 33 89-121 146-179 (408)
260 1ojt_A Surface protein; redox- 97.0 0.0029 1E-07 68.6 11.5 33 89-121 186-219 (482)
261 2z3y_A Lysine-specific histone 97.0 0.00044 1.5E-08 78.2 4.9 39 86-124 105-144 (662)
262 1xhc_A NADH oxidase /nitrite r 97.0 0.0022 7.5E-08 66.9 9.8 33 89-121 144-177 (367)
263 4a5l_A Thioredoxin reductase; 97.0 0.0078 2.7E-07 60.8 13.7 50 228-281 201-250 (314)
264 1lqt_A FPRA; NADP+ derivative, 97.0 0.00044 1.5E-08 74.6 4.3 51 436-494 337-388 (456)
265 3o0h_A Glutathione reductase; 96.9 0.0037 1.2E-07 67.9 11.6 32 89-120 192-224 (484)
266 3ntd_A FAD-dependent pyridine 96.9 0.0059 2E-07 67.5 13.3 31 90-120 153-184 (565)
267 1zk7_A HGII, reductase, mercur 96.9 0.0048 1.6E-07 66.5 12.2 32 89-120 177-209 (467)
268 2xag_A Lysine-specific histone 96.9 0.0006 2.1E-08 78.7 5.1 39 87-125 277-316 (852)
269 2x8g_A Thioredoxin glutathione 96.9 0.0084 2.9E-07 66.9 14.1 30 90-119 288-318 (598)
270 4b1b_A TRXR, thioredoxin reduc 96.7 0.011 3.9E-07 64.7 13.3 32 89-120 224-256 (542)
271 3ics_A Coenzyme A-disulfide re 96.7 0.0073 2.5E-07 67.2 12.0 32 89-120 188-220 (588)
272 1m6i_A Programmed cell death p 96.6 0.012 4.3E-07 63.8 12.9 51 218-279 230-280 (493)
273 1vg0_A RAB proteins geranylger 96.6 0.0017 5.9E-08 72.1 5.7 40 87-126 7-47 (650)
274 2vdc_G Glutamate synthase [NAD 96.5 0.0045 1.5E-07 66.5 8.2 32 89-120 265-298 (456)
275 3l8k_A Dihydrolipoyl dehydroge 96.4 0.014 4.7E-07 62.9 11.3 33 89-121 173-206 (466)
276 1gte_A Dihydropyrimidine dehyd 96.4 0.014 4.9E-07 69.2 12.3 31 90-120 334-366 (1025)
277 4eqs_A Coenzyme A disulfide re 96.4 0.0092 3.1E-07 63.8 9.7 33 89-121 148-181 (437)
278 1cjc_A Protein (adrenodoxin re 96.4 0.0018 6.2E-08 69.7 4.1 51 436-494 345-396 (460)
279 2gag_A Heterotetrameric sarcos 96.3 0.014 4.6E-07 68.9 11.6 51 228-281 329-383 (965)
280 3uox_A Otemo; baeyer-villiger 96.3 0.033 1.1E-06 61.2 13.8 33 89-121 186-219 (545)
281 4g6h_A Rotenone-insensitive NA 96.3 0.016 5.4E-07 63.1 11.0 48 437-491 351-399 (502)
282 3kd9_A Coenzyme A disulfide re 96.2 0.017 5.9E-07 61.8 10.7 33 89-121 149-182 (449)
283 4gcm_A TRXR, thioredoxin reduc 96.0 0.07 2.4E-06 53.7 13.7 32 90-121 147-179 (312)
284 3gwf_A Cyclohexanone monooxyge 95.9 0.088 3E-06 57.7 14.4 33 89-121 179-212 (540)
285 3klj_A NAD(FAD)-dependent dehy 95.8 0.005 1.7E-07 64.6 4.0 33 89-121 147-180 (385)
286 3d1c_A Flavin-containing putat 95.8 0.037 1.3E-06 57.2 10.6 31 90-120 168-199 (369)
287 2lfc_A Fumarate reductase, fla 95.5 0.0034 1.1E-07 57.1 1.2 78 337-422 7-110 (160)
288 4ap3_A Steroid monooxygenase; 95.4 0.091 3.1E-06 57.7 12.3 34 88-121 191-225 (549)
289 1lqt_A FPRA; NADP+ derivative, 95.3 0.059 2E-06 57.7 10.1 49 228-281 265-326 (456)
290 3ayj_A Pro-enzyme of L-phenyla 95.2 0.0071 2.4E-07 68.1 2.8 35 88-122 56-100 (721)
291 1o94_A Tmadh, trimethylamine d 95.2 0.029 9.8E-07 64.0 7.7 32 89-120 529-563 (729)
292 1cjc_A Protein (adrenodoxin re 95.0 0.0094 3.2E-07 64.1 2.7 36 88-123 6-44 (460)
293 1ps9_A 2,4-dienoyl-COA reducta 94.6 0.074 2.5E-06 60.0 9.0 50 220-281 579-628 (671)
294 3fbs_A Oxidoreductase; structu 94.3 0.16 5.6E-06 50.2 9.9 33 88-120 141-173 (297)
295 1w4x_A Phenylacetone monooxyge 93.2 0.68 2.3E-05 50.6 13.2 32 89-120 187-219 (542)
296 3sx6_A Sulfide-quinone reducta 92.0 0.7 2.4E-05 48.9 11.0 51 220-280 214-268 (437)
297 4fk1_A Putative thioredoxin re 91.5 0.48 1.6E-05 47.3 8.6 31 89-119 147-179 (304)
298 3fwz_A Inner membrane protein 91.5 0.22 7.4E-06 43.6 5.2 33 88-120 7-40 (140)
299 3h28_A Sulfide-quinone reducta 91.4 0.64 2.2E-05 49.0 9.9 51 219-280 205-255 (430)
300 3p1w_A Rabgdi protein; GDI RAB 91.1 0.34 1.2E-05 51.9 7.2 41 86-126 18-59 (475)
301 4b63_A L-ornithine N5 monooxyg 90.6 2.3 7.9E-05 45.8 13.5 31 90-120 248-281 (501)
302 2g1u_A Hypothetical protein TM 90.5 0.21 7E-06 44.6 4.2 32 89-120 20-52 (155)
303 3llv_A Exopolyphosphatase-rela 89.8 0.27 9.4E-06 42.8 4.3 32 89-120 7-39 (141)
304 3kkj_A Amine oxidase, flavin-c 89.3 0.24 8.2E-06 47.6 3.9 42 443-494 288-329 (336)
305 2cul_A Glucose-inhibited divis 89.2 0.28 9.6E-06 47.0 4.3 37 446-492 195-231 (232)
306 3h8l_A NADH oxidase; membrane 88.7 1.3 4.5E-05 46.2 9.4 48 218-280 222-269 (409)
307 1lss_A TRK system potassium up 88.5 0.35 1.2E-05 41.7 4.1 31 89-119 5-36 (140)
308 1id1_A Putative potassium chan 87.9 0.6 2E-05 41.4 5.2 31 89-119 4-35 (153)
309 2hmt_A YUAA protein; RCK, KTN, 87.2 0.55 1.9E-05 40.7 4.5 31 90-120 8-39 (144)
310 3dfz_A SIRC, precorrin-2 dehyd 86.2 0.56 1.9E-05 44.7 4.2 32 88-119 31-63 (223)
311 2x5o_A UDP-N-acetylmuramoylala 86.2 0.64 2.2E-05 49.3 5.1 45 90-135 7-52 (439)
312 3c85_A Putative glutathione-re 85.6 0.72 2.5E-05 42.2 4.6 32 89-120 40-73 (183)
313 3ic5_A Putative saccharopine d 85.5 0.72 2.5E-05 38.3 4.2 32 89-120 6-39 (118)
314 1jw9_B Molybdopterin biosynthe 85.2 0.54 1.8E-05 45.7 3.6 35 88-122 31-67 (249)
315 1kyq_A Met8P, siroheme biosynt 85.1 0.54 1.8E-05 46.3 3.6 32 89-120 14-46 (274)
316 3rui_A Ubiquitin-like modifier 84.9 0.81 2.8E-05 46.4 4.9 39 88-126 34-74 (340)
317 2bcg_G Secretory pathway GDP d 84.3 1.6 5.3E-05 46.5 7.1 40 87-126 10-50 (453)
318 2zxi_A TRNA uridine 5-carboxym 83.9 0.97 3.3E-05 50.0 5.3 44 442-495 381-425 (637)
319 4dio_A NAD(P) transhydrogenase 83.9 0.71 2.4E-05 48.0 4.0 33 88-120 190-223 (405)
320 3h8v_A Ubiquitin-like modifier 83.4 0.74 2.5E-05 45.8 3.8 40 87-126 35-76 (292)
321 3l4b_C TRKA K+ channel protien 83.3 0.84 2.9E-05 43.1 4.0 31 90-120 2-33 (218)
322 2gv8_A Monooxygenase; FMO, FAD 82.9 0.77 2.6E-05 48.7 4.0 33 88-120 212-246 (447)
323 2xve_A Flavin-containing monoo 82.8 0.84 2.9E-05 48.8 4.2 32 89-120 198-230 (464)
324 3p2y_A Alanine dehydrogenase/p 82.1 0.8 2.7E-05 47.2 3.5 33 88-120 184-217 (381)
325 1d5t_A Guanine nucleotide diss 81.9 1.3 4.4E-05 46.8 5.3 40 87-126 5-45 (433)
326 1pjc_A Protein (L-alanine dehy 81.7 1 3.5E-05 46.3 4.3 31 89-119 168-199 (361)
327 3lk7_A UDP-N-acetylmuramoylala 81.0 0.92 3.2E-05 48.3 3.7 32 89-120 10-42 (451)
328 3ado_A Lambda-crystallin; L-gu 80.9 1.1 3.7E-05 45.2 4.0 31 89-119 7-38 (319)
329 1x13_A NAD(P) transhydrogenase 80.6 1 3.5E-05 47.0 3.8 33 88-120 172-205 (401)
330 1zud_1 Adenylyltransferase THI 80.1 1 3.6E-05 43.7 3.5 35 88-122 28-64 (251)
331 3vh1_A Ubiquitin-like modifier 79.8 1.5 5E-05 47.9 4.7 39 88-126 327-367 (598)
332 3h5n_A MCCB protein; ubiquitin 79.6 1.3 4.4E-05 45.4 4.1 35 88-122 118-154 (353)
333 4gsl_A Ubiquitin-like modifier 79.5 1.5 5.1E-05 47.9 4.7 40 87-126 325-366 (615)
334 2a9f_A Putative malic enzyme ( 79.4 1.2 4.2E-05 45.8 3.8 35 86-120 186-222 (398)
335 1l7d_A Nicotinamide nucleotide 79.4 1.3 4.4E-05 46.1 4.0 33 88-120 172-205 (384)
336 3phh_A Shikimate dehydrogenase 79.0 1.4 4.9E-05 43.1 4.0 33 88-120 118-151 (269)
337 1vl6_A Malate oxidoreductase; 79.0 1.3 4.4E-05 45.6 3.8 33 87-119 191-225 (388)
338 1nyt_A Shikimate 5-dehydrogena 78.7 1.4 4.8E-05 43.3 3.9 31 89-119 120-151 (271)
339 4ffl_A PYLC; amino acid, biosy 77.8 1.7 5.7E-05 44.6 4.4 31 91-121 4-35 (363)
340 2vvm_A Monoamine oxidase N; FA 76.9 4.7 0.00016 43.0 7.8 56 214-280 255-311 (495)
341 1tt5_B Ubiquitin-activating en 76.6 2.3 7.8E-05 44.8 5.0 36 88-123 40-77 (434)
342 2eez_A Alanine dehydrogenase; 76.6 1.8 6.3E-05 44.6 4.3 31 89-119 167-198 (369)
343 3i83_A 2-dehydropantoate 2-red 76.4 1.8 6.1E-05 43.6 4.0 32 89-120 3-35 (320)
344 4dgk_A Phytoene dehydrogenase; 75.7 1.6 5.5E-05 46.8 3.7 38 89-126 2-40 (501)
345 3hn2_A 2-dehydropantoate 2-red 75.6 1.9 6.5E-05 43.2 3.9 32 89-120 3-35 (312)
346 1y8q_A Ubiquitin-like 1 activa 75.5 2.1 7.3E-05 43.6 4.3 39 88-126 36-76 (346)
347 3oj0_A Glutr, glutamyl-tRNA re 75.4 1.1 3.7E-05 39.2 1.8 31 89-119 22-53 (144)
348 2vhw_A Alanine dehydrogenase; 75.1 2.1 7.2E-05 44.2 4.3 32 88-119 168-200 (377)
349 3l9w_A Glutathione-regulated p 75.1 2.3 8E-05 44.5 4.6 32 89-120 5-37 (413)
350 4e12_A Diketoreductase; oxidor 74.8 2 7E-05 42.3 3.9 30 90-119 6-36 (283)
351 1p77_A Shikimate 5-dehydrogena 74.6 1.7 5.8E-05 42.7 3.2 31 89-119 120-151 (272)
352 1rp0_A ARA6, thiazole biosynth 74.3 0.9 3.1E-05 44.9 1.1 48 445-494 229-276 (284)
353 1f0y_A HCDH, L-3-hydroxyacyl-C 74.2 2.1 7.3E-05 42.6 3.9 30 90-119 17-47 (302)
354 3tnl_A Shikimate dehydrogenase 74.0 2.5 8.5E-05 42.5 4.3 31 89-119 155-187 (315)
355 3g17_A Similar to 2-dehydropan 74.0 2.5 8.6E-05 41.9 4.4 32 89-120 3-35 (294)
356 3jyo_A Quinate/shikimate dehyd 73.7 2.3 7.9E-05 42.0 3.9 31 89-119 128-160 (283)
357 3eag_A UDP-N-acetylmuramate:L- 73.6 2.4 8.1E-05 42.8 4.1 31 90-120 6-38 (326)
358 4a9w_A Monooxygenase; baeyer-v 73.0 1.9 6.5E-05 43.5 3.3 32 89-120 164-195 (357)
359 3ghy_A Ketopantoate reductase 73.0 3 0.0001 42.2 4.7 31 89-119 4-35 (335)
360 3don_A Shikimate dehydrogenase 72.9 2.5 8.6E-05 41.6 3.9 33 88-120 117-151 (277)
361 1pjq_A CYSG, siroheme synthase 72.8 2.5 8.7E-05 44.9 4.3 31 89-119 13-44 (457)
362 3t4e_A Quinate/shikimate dehyd 72.7 2.8 9.6E-05 42.0 4.3 31 89-119 149-181 (312)
363 3u62_A Shikimate dehydrogenase 72.5 3.4 0.00012 40.0 4.8 31 90-120 110-142 (253)
364 3tum_A Shikimate dehydrogenase 71.3 2.9 9.8E-05 41.0 3.9 31 89-119 126-158 (269)
365 1ks9_A KPA reductase;, 2-dehyd 71.3 2.9 9.8E-05 41.1 4.0 31 90-120 2-33 (291)
366 2egg_A AROE, shikimate 5-dehyd 71.1 2.7 9.3E-05 41.8 3.8 31 89-119 142-174 (297)
367 3pwz_A Shikimate dehydrogenase 70.7 3 0.0001 40.9 3.9 32 88-119 120-153 (272)
368 3k96_A Glycerol-3-phosphate de 70.6 3.6 0.00012 42.1 4.7 32 88-119 29-61 (356)
369 1npy_A Hypothetical shikimate 70.5 2.9 9.8E-05 41.0 3.7 31 89-119 120-152 (271)
370 2raf_A Putative dinucleotide-b 70.4 3.2 0.00011 38.8 3.9 32 89-120 20-52 (209)
371 3ond_A Adenosylhomocysteinase; 70.2 2.9 0.0001 44.4 3.9 31 89-119 266-297 (488)
372 4g65_A TRK system potassium up 70.1 2 6.8E-05 45.8 2.6 32 89-120 4-36 (461)
373 1vg0_A RAB proteins geranylger 70.1 8.9 0.0003 42.4 7.9 55 214-277 378-433 (650)
374 3fbt_A Chorismate mutase and s 70.1 2.8 9.7E-05 41.3 3.6 32 88-119 122-155 (282)
375 1lu9_A Methylene tetrahydromet 69.8 3.5 0.00012 40.7 4.3 31 89-119 120-152 (287)
376 2dpo_A L-gulonate 3-dehydrogen 69.5 3.2 0.00011 41.7 4.0 31 89-119 7-38 (319)
377 3o8q_A Shikimate 5-dehydrogena 69.1 3.6 0.00012 40.6 4.1 31 89-119 127-159 (281)
378 1y8q_B Anthracycline-, ubiquit 68.8 3.3 0.00011 45.7 4.1 38 88-125 17-56 (640)
379 2y0c_A BCEC, UDP-glucose dehyd 68.7 3.1 0.00011 44.5 3.8 33 88-120 8-41 (478)
380 1pzg_A LDH, lactate dehydrogen 68.4 3.8 0.00013 41.5 4.2 32 89-120 10-43 (331)
381 2ew2_A 2-dehydropantoate 2-red 68.3 3.4 0.00012 41.0 3.9 30 90-119 5-35 (316)
382 2o7s_A DHQ-SDH PR, bifunctiona 66.6 3.8 0.00013 44.4 4.0 31 89-119 365-396 (523)
383 3k6j_A Protein F01G10.3, confi 66.6 5 0.00017 42.5 4.8 32 89-120 55-87 (460)
384 2vns_A Metalloreductase steap3 65.8 6.3 0.00022 36.9 5.0 31 89-119 29-60 (215)
385 3d4o_A Dipicolinate synthase s 65.8 4.7 0.00016 39.9 4.3 32 88-119 155-187 (293)
386 2rir_A Dipicolinate synthase, 65.5 4.8 0.00016 40.0 4.3 32 88-119 157-189 (300)
387 3gg2_A Sugar dehydrogenase, UD 65.1 4.2 0.00014 43.1 3.9 31 90-120 4-35 (450)
388 1zcj_A Peroxisomal bifunctiona 65.0 4 0.00014 43.4 3.8 31 90-120 39-70 (463)
389 3doj_A AT3G25530, dehydrogenas 64.9 4.5 0.00015 40.4 4.0 32 89-120 22-54 (310)
390 1bg6_A N-(1-D-carboxylethyl)-L 64.9 4.3 0.00015 41.2 3.9 31 89-119 5-36 (359)
391 3hwr_A 2-dehydropantoate 2-red 64.9 4.7 0.00016 40.4 4.1 30 89-119 20-50 (318)
392 2hk9_A Shikimate dehydrogenase 64.7 4.1 0.00014 39.9 3.5 31 89-119 130-161 (275)
393 1guz_A Malate dehydrogenase; o 64.6 4.8 0.00016 40.2 4.1 31 90-120 2-35 (310)
394 3ego_A Probable 2-dehydropanto 63.7 4.7 0.00016 40.2 3.8 31 89-120 3-34 (307)
395 3vtf_A UDP-glucose 6-dehydroge 63.3 5.2 0.00018 42.1 4.1 32 88-119 21-53 (444)
396 1jay_A Coenzyme F420H2:NADP+ o 63.2 5.7 0.00019 36.9 4.1 30 90-119 2-33 (212)
397 4eez_A Alcohol dehydrogenase 1 63.2 5.4 0.00018 40.4 4.2 30 90-119 166-197 (348)
398 2hjr_A Malate dehydrogenase; m 62.6 5.4 0.00019 40.2 4.0 32 89-120 15-48 (328)
399 3jsk_A Cypbp37 protein; octame 62.2 1.7 5.9E-05 44.2 0.2 49 444-494 288-336 (344)
400 4a7p_A UDP-glucose dehydrogena 62.1 5.2 0.00018 42.2 3.9 34 88-121 8-42 (446)
401 1tt5_A APPBP1, amyloid protein 62.1 4.9 0.00017 43.5 3.8 34 88-121 32-67 (531)
402 3orq_A N5-carboxyaminoimidazol 61.6 6.2 0.00021 40.6 4.4 33 89-121 13-46 (377)
403 1lld_A L-lactate dehydrogenase 61.4 5.6 0.00019 39.7 3.9 31 89-119 8-41 (319)
404 2d5c_A AROE, shikimate 5-dehyd 61.4 6.8 0.00023 38.0 4.4 30 90-119 118-148 (263)
405 3q2o_A Phosphoribosylaminoimid 61.4 6.2 0.00021 40.7 4.4 32 89-120 15-47 (389)
406 1evy_A Glycerol-3-phosphate de 61.4 4.2 0.00014 41.6 3.0 30 90-119 17-47 (366)
407 3gvp_A Adenosylhomocysteinase 61.4 4.9 0.00017 42.0 3.4 33 88-120 220-253 (435)
408 4gx0_A TRKA domain protein; me 61.3 7.1 0.00024 42.6 5.0 33 89-121 349-382 (565)
409 3ce6_A Adenosylhomocysteinase; 61.0 4.8 0.00016 43.0 3.4 32 89-120 275-307 (494)
410 1txg_A Glycerol-3-phosphate de 60.8 5.1 0.00018 40.2 3.5 29 90-118 2-31 (335)
411 1t2d_A LDH-P, L-lactate dehydr 60.6 6.2 0.00021 39.7 4.1 31 89-119 5-37 (322)
412 2v6b_A L-LDH, L-lactate dehydr 60.5 6 0.00021 39.4 3.9 30 90-119 2-34 (304)
413 3two_A Mannitol dehydrogenase; 60.5 6.2 0.00021 40.0 4.1 32 89-120 178-210 (348)
414 1mv8_A GMD, GDP-mannose 6-dehy 60.4 4.7 0.00016 42.5 3.2 30 90-119 2-32 (436)
415 1pqw_A Polyketide synthase; ro 60.3 4.7 0.00016 37.0 2.9 30 90-119 41-72 (198)
416 3ew7_A LMO0794 protein; Q8Y8U8 60.3 7.4 0.00025 36.0 4.4 30 91-120 3-34 (221)
417 1leh_A Leucine dehydrogenase; 59.9 6.2 0.00021 40.4 3.9 30 89-118 174-204 (364)
418 2nvu_B Maltose binding protein 59.7 6 0.0002 45.3 4.2 38 87-124 410-449 (805)
419 2ewd_A Lactate dehydrogenase,; 59.6 5.9 0.0002 39.7 3.7 32 89-120 5-38 (317)
420 3dtt_A NADP oxidoreductase; st 59.4 7.5 0.00026 37.2 4.3 33 88-120 19-52 (245)
421 1piw_A Hypothetical zinc-type 59.4 6.5 0.00022 40.1 4.0 32 89-120 181-213 (360)
422 1zej_A HBD-9, 3-hydroxyacyl-CO 59.3 6.4 0.00022 39.0 3.8 33 87-120 11-44 (293)
423 3mog_A Probable 3-hydroxybutyr 59.3 7.1 0.00024 41.7 4.4 31 90-120 7-38 (483)
424 1yqd_A Sinapyl alcohol dehydro 59.3 6.8 0.00023 40.0 4.2 31 89-119 189-220 (366)
425 3gpi_A NAD-dependent epimerase 59.2 9 0.00031 37.3 4.9 32 90-121 5-37 (286)
426 3e8x_A Putative NAD-dependent 59.1 7.4 0.00025 36.7 4.2 32 89-120 22-55 (236)
427 3pef_A 6-phosphogluconate dehy 58.8 6.6 0.00023 38.6 3.8 31 90-120 3-34 (287)
428 3o38_A Short chain dehydrogena 58.8 5.4 0.00018 38.5 3.2 31 90-120 24-57 (266)
429 3uog_A Alcohol dehydrogenase; 58.7 7.4 0.00025 39.7 4.3 31 89-119 191-222 (363)
430 1uuf_A YAHK, zinc-type alcohol 58.5 7.2 0.00025 40.0 4.2 30 90-119 197-227 (369)
431 1hdo_A Biliverdin IX beta redu 58.4 8.1 0.00028 35.2 4.2 31 90-120 5-37 (206)
432 2uyy_A N-PAC protein; long-cha 58.4 10 0.00034 37.8 5.2 32 89-120 31-63 (316)
433 1gpj_A Glutamyl-tRNA reductase 58.4 6 0.00021 41.2 3.6 31 89-119 168-200 (404)
434 3h2s_A Putative NADH-flavin re 58.1 8.1 0.00028 35.9 4.2 30 91-120 3-34 (224)
435 1nvt_A Shikimate 5'-dehydrogen 58.1 5.8 0.0002 39.1 3.3 29 90-118 130-158 (287)
436 1z82_A Glycerol-3-phosphate de 57.7 6.8 0.00023 39.5 3.8 32 88-119 14-46 (335)
437 1ur5_A Malate dehydrogenase; o 57.5 7.6 0.00026 38.7 4.1 30 90-119 4-35 (309)
438 2gjc_A Thiazole biosynthetic e 57.3 4 0.00014 41.1 2.0 43 448-492 282-324 (326)
439 2cdc_A Glucose dehydrogenase g 57.3 6.8 0.00023 40.0 3.8 31 89-119 182-213 (366)
440 3aw8_A PURK, phosphoribosylami 56.9 8.4 0.00029 39.3 4.4 30 91-120 2-32 (369)
441 2pv7_A T-protein [includes: ch 56.9 8.4 0.00029 38.1 4.2 31 90-120 23-55 (298)
442 4huj_A Uncharacterized protein 56.6 7.3 0.00025 36.6 3.6 31 89-119 24-56 (220)
443 3qha_A Putative oxidoreductase 56.2 7 0.00024 38.6 3.5 32 89-120 16-48 (296)
444 2hcy_A Alcohol dehydrogenase 1 56.0 9 0.00031 38.7 4.4 32 89-120 171-204 (347)
445 2cf5_A Atccad5, CAD, cinnamyl 55.6 8.2 0.00028 39.3 4.0 30 90-119 183-213 (357)
446 3g0o_A 3-hydroxyisobutyrate de 55.5 8.2 0.00028 38.2 3.9 31 89-119 8-39 (303)
447 3s2e_A Zinc-containing alcohol 55.4 7.3 0.00025 39.3 3.6 31 89-119 168-199 (340)
448 1edz_A 5,10-methylenetetrahydr 55.3 6.5 0.00022 39.4 3.0 33 87-119 176-210 (320)
449 3nx4_A Putative oxidoreductase 55.2 8.5 0.00029 38.4 4.0 30 90-119 149-180 (324)
450 3pdu_A 3-hydroxyisobutyrate de 55.2 7.2 0.00025 38.3 3.4 31 90-120 3-34 (287)
451 1e3j_A NADP(H)-dependent ketos 55.1 9.1 0.00031 38.8 4.3 30 90-119 171-201 (352)
452 3c7a_A Octopine dehydrogenase; 55.0 6.6 0.00023 40.7 3.3 28 90-117 4-33 (404)
453 3uko_A Alcohol dehydrogenase c 54.9 8.8 0.0003 39.4 4.2 32 89-120 195-228 (378)
454 3tl2_A Malate dehydrogenase; c 54.9 9.4 0.00032 38.2 4.2 31 89-119 9-41 (315)
455 3ius_A Uncharacterized conserv 54.9 8.7 0.0003 37.3 4.0 31 90-120 7-38 (286)
456 1tt7_A YHFP; alcohol dehydroge 54.7 11 0.00036 37.8 4.7 30 90-119 153-184 (330)
457 1dlj_A UDP-glucose dehydrogena 54.5 7.1 0.00024 40.6 3.3 29 90-119 2-31 (402)
458 3pid_A UDP-glucose 6-dehydroge 54.4 7.9 0.00027 40.6 3.7 31 89-120 37-68 (432)
459 4e4t_A Phosphoribosylaminoimid 54.4 8.6 0.0003 40.2 4.0 32 89-120 36-68 (419)
460 2f1k_A Prephenate dehydrogenas 54.4 8.8 0.0003 37.3 3.9 30 90-119 2-32 (279)
461 1y6j_A L-lactate dehydrogenase 54.2 9.4 0.00032 38.2 4.1 31 89-119 8-41 (318)
462 2p4q_A 6-phosphogluconate dehy 54.2 11 0.00038 40.3 4.9 34 87-120 9-43 (497)
463 1b37_A Protein (polyamine oxid 54.1 16 0.00054 38.6 6.1 56 215-280 207-269 (472)
464 2dkn_A 3-alpha-hydroxysteroid 54.1 11 0.00036 35.8 4.4 30 91-120 4-35 (255)
465 2zyd_A 6-phosphogluconate dehy 53.8 10 0.00035 40.4 4.5 34 87-120 14-48 (480)
466 1rjw_A ADH-HT, alcohol dehydro 53.7 7.3 0.00025 39.3 3.2 30 90-119 167-197 (339)
467 1v3u_A Leukotriene B4 12- hydr 53.5 10 0.00035 38.0 4.3 30 90-119 148-179 (333)
468 3n58_A Adenosylhomocysteinase; 53.2 8.1 0.00028 40.5 3.4 32 89-120 248-280 (464)
469 3k30_A Histamine dehydrogenase 53.0 7.6 0.00026 43.5 3.6 33 89-121 524-559 (690)
470 1c1d_A L-phenylalanine dehydro 52.9 9.4 0.00032 38.8 3.8 31 88-118 175-206 (355)
471 2ivd_A PPO, PPOX, protoporphyr 52.8 12 0.0004 39.6 4.9 56 215-281 239-294 (478)
472 3l6d_A Putative oxidoreductase 52.8 15 0.0005 36.5 5.2 32 89-120 10-42 (306)
473 1h2b_A Alcohol dehydrogenase; 52.7 9.4 0.00032 38.8 3.9 31 89-119 188-220 (359)
474 2yg5_A Putrescine oxidase; oxi 52.4 12 0.00041 39.1 4.9 52 215-280 216-267 (453)
475 2wtb_A MFP2, fatty acid multif 52.2 9.9 0.00034 42.9 4.3 32 89-120 313-345 (725)
476 3ax6_A Phosphoribosylaminoimid 52.1 11 0.00038 38.6 4.4 31 90-120 3-34 (380)
477 2pd4_A Enoyl-[acyl-carrier-pro 51.8 10 0.00035 36.8 3.9 30 91-120 9-42 (275)
478 2dvm_A Malic enzyme, 439AA lon 51.7 12 0.00041 39.2 4.5 30 88-117 186-219 (439)
479 3fi9_A Malate dehydrogenase; s 51.7 12 0.0004 38.0 4.3 30 89-118 9-42 (343)
480 4dll_A 2-hydroxy-3-oxopropiona 51.7 8.3 0.00028 38.6 3.2 32 89-120 32-64 (320)
481 2pgd_A 6-phosphogluconate dehy 51.6 12 0.00041 39.9 4.7 32 89-120 3-35 (482)
482 2h6e_A ADH-4, D-arabinose 1-de 51.5 9.1 0.00031 38.7 3.5 30 89-118 172-204 (344)
483 3gvi_A Malate dehydrogenase; N 51.3 11 0.00037 37.9 4.0 33 88-120 7-41 (324)
484 2cvz_A Dehydrogenase, 3-hydrox 51.2 9.7 0.00033 37.2 3.6 30 90-120 3-33 (289)
485 3m6i_A L-arabinitol 4-dehydrog 51.1 13 0.00046 37.7 4.8 31 89-119 181-213 (363)
486 1np3_A Ketol-acid reductoisome 51.0 13 0.00044 37.6 4.6 32 89-120 17-49 (338)
487 2jae_A L-amino acid oxidase; o 50.9 29 0.001 36.6 7.7 56 215-280 240-295 (489)
488 1pgj_A 6PGDH, 6-PGDH, 6-phosph 50.9 12 0.00042 39.8 4.6 30 90-119 3-33 (478)
489 4eye_A Probable oxidoreductase 50.8 9 0.00031 38.7 3.4 31 89-119 161-193 (342)
490 3d0o_A L-LDH 1, L-lactate dehy 50.7 9.7 0.00033 38.1 3.5 31 88-118 6-39 (317)
491 3c24_A Putative oxidoreductase 50.7 11 0.00038 36.9 3.9 30 90-119 13-44 (286)
492 4aj2_A L-lactate dehydrogenase 50.6 12 0.0004 37.8 4.1 31 88-118 19-52 (331)
493 1xa0_A Putative NADPH dependen 50.6 12 0.0004 37.5 4.2 30 90-119 152-183 (328)
494 2gf2_A Hibadh, 3-hydroxyisobut 50.5 11 0.00037 37.0 3.9 31 90-120 2-33 (296)
495 1iz0_A Quinone oxidoreductase; 50.5 9.4 0.00032 37.7 3.4 31 89-119 127-159 (302)
496 2b5w_A Glucose dehydrogenase; 50.5 12 0.00041 38.0 4.3 31 90-120 175-209 (357)
497 3h9u_A Adenosylhomocysteinase; 50.5 9.5 0.00032 39.9 3.4 31 89-119 212-243 (436)
498 3i6d_A Protoporphyrinogen oxid 50.4 21 0.00073 37.2 6.4 54 215-281 236-289 (470)
499 2h78_A Hibadh, 3-hydroxyisobut 50.4 9 0.00031 37.8 3.2 30 90-119 5-35 (302)
500 3fpc_A NADP-dependent alcohol 50.0 12 0.00042 37.8 4.3 30 89-118 168-199 (352)
No 1
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=100.00 E-value=5.2e-91 Score=781.88 Aligned_cols=512 Identities=34% Similarity=0.517 Sum_probs=446.9
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecC--CCCCHHHHHHHHHHhcccCCCHHH
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLC--PSDSVESHMQDTIVAGAYLCDDET 162 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~--~~d~~~~~~~~~~~~g~~~~~~~~ 162 (647)
+.++||||||||+|||+||+.|++.| +|+||||....+|+|.+++||+++..+ ..|+++.|+.|+++.+.++++++.
T Consensus 16 ~~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l~d~~~ 95 (621)
T 2h88_A 16 DHEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDA 95 (621)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHH
T ss_pred cccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCCCCHHH
Confidence 45799999999999999999999999 999999998888888899999987654 358899999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHcCCCcccCCCCCccccccCCcccc--------ceeeccCCchHHHHHHHHHHHHcCCCcEEEc
Q 006387 163 VRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHH--------RIVHAADMTGREIERALLEAVVSDPNISVFE 234 (647)
Q Consensus 163 ~~~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~--------r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~ 234 (647)
++.+++++++.++||.++|++|.+..+|.+....+++++.+ |+++..+.+|..++..|.+.+.+ .||+|++
T Consensus 96 v~~l~~~s~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~~-~gv~i~~ 174 (621)
T 2h88_A 96 IHYMTEQAPAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLR-YDTSYFV 174 (621)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHTT-SCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccCCCCceeccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHHh-CCCEEEE
Confidence 99999999999999999999999888888887788888776 88888888999999999999987 5999999
Q ss_pred ceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccccCCCCCCCCCCcchHHHHHHHcCCeecCcccc
Q 006387 235 HHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFV 314 (647)
Q Consensus 235 ~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~~~~~~~~~~~tGdg~~~a~~aGa~l~~~e~~ 314 (647)
++.|++|+.+ ++ +|.||.+.+..+|+...|+|+.|||||||++.+|..++++..+||||+.||+++||.+.+|||+
T Consensus 175 ~~~v~~Li~~-~g---~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~y~~~t~~~~~tGdG~~mA~raGa~l~~me~~ 250 (621)
T 2h88_A 175 EYFALDLLME-NG---ECRGVIALCIEDGTIHRFRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFV 250 (621)
T ss_dssp TEEEEEEEEE-TT---EEEEEEEEETTTCCEEEEEEEEEEECCCCCGGGSSSBSSCTTCCCHHHHHHHHTTCCEECTTCE
T ss_pred ceEEEEEEEE-CC---EEEEEEEEEcCCCcEEEEEcCeEEECCCccccccCCcCCCCCCChHHHHHHHHcCCCcccCcce
Confidence 9999999986 55 8999999886778888899999999999999999989999999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCCCCccceeeecccCCCceEEeCCCCccccccccc-cccCchhHHHHHHHHHHHhcCC-----
Q 006387 315 QFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDER-AELAPRDVVARSIDDQLKKRNE----- 388 (647)
Q Consensus 315 q~~p~~~~~~g~~~~p~~~~~~~~l~~e~~~~~g~~~vn~~G~rf~~~~~~~-~~l~~rd~~~~~i~~~~~~~~~----- 388 (647)
||||+.+... .++++|++|++|++++|.+|+|||++|.+. .++++||+++++|..++.++.+
T Consensus 251 q~hPt~~~~~------------~~l~se~~rg~g~ilvn~~G~RF~~~y~p~~~ela~rdvv~rai~~e~~~g~g~~~~~ 318 (621)
T 2h88_A 251 QFHPTGIYGA------------GCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTIEIREGRGCGPEK 318 (621)
T ss_dssp EEEEEEETTT------------CCBCCTHHHHTTCEEECTTCCCTHHHHSTTTGGGSCHHHHHHHHHHHHHTTCCBTTTT
T ss_pred eeecccccCC------------cceecccccCCccEEECCCCCCcccccCcccccccchHHHHHHHHHHHHhcCCcccCC
Confidence 9999987532 467889999999999999999999999876 4899999999999988876542
Q ss_pred CeEEEecCCCChhHHHhhChhHHHHHHHc-CCCCCCCCeeeeeeeceecCceEECCCCC---------cccCceeecccc
Q 006387 389 KYVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVPAAHYMCGGVRAGLQGE---------TNVRGLYVAGEV 458 (647)
Q Consensus 389 ~~v~ld~~~~~~~~l~~~~~~~~~~~~~~-G~d~~~~~i~v~p~~~~~~GGi~vD~~~~---------T~ipGLyAaGe~ 458 (647)
..||+|+++++.+.+.+++|++.+.+..+ |+|+.++|++|.|+.||+||||+||.++| |+||||||||||
T Consensus 319 ~~v~ld~~~l~~~~l~~~~~~i~~~~~~~~G~D~~~~pi~v~p~~h~tmGGi~~d~~~~Vl~~~~~~~t~IpGLyAaGE~ 398 (621)
T 2h88_A 319 DHVYLQLHHLPPQQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVITHVNGEDKVVPGLYACGEA 398 (621)
T ss_dssp CBEEEECTTSCHHHHHHHCHHHHHHHHHHHCCCTTTSCEEEEEEEEEESCBEEBCTTSEEEEEETTEEEEEEEEEECGGG
T ss_pred CeEEEEcccCCHHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEeecccccCcEeECCCCeEeecccCCCcccCceEEcccc
Confidence 45999999999999999999999998886 99999999999999999999999999987 799999999999
Q ss_pred cCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhhcccccccccccccccccCcccccccch-----hhhhcHHHHHHHH
Q 006387 459 ACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMH-----NILRRTKEVRKEL 533 (647)
Q Consensus 459 a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l 533 (647)
+|+|+||+|||+||||++|+|||++||++|+++++.... ... ..... ......++. +....+.+++.+|
T Consensus 399 a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~~~~~~-~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l 472 (621)
T 2h88_A 399 ASASVHGANRLGANSLLDLVVFGRACALTIAETCKPGEP-VPS---IKPNA--GEESVANLDKLRFADGTIRTSEARLNM 472 (621)
T ss_dssp EECSSSTTSCCTTSHHHHHHHHHHHHHHHHHHHCCTTCC-CCC---CCTTT--THHHHHHHHHHHTCBSSEEHHHHHHHH
T ss_pred ccccccCCCCCchHhHHHHHHHHHHHHHHHHHhhhcccc-ccc---cchhH--HHHHHHHHHHhhccCCCCCHHHHHHHH
Confidence 988999999999999999999999999999988642210 000 00000 000000000 1124578899999
Q ss_pred HHHHHhcCccccCHHHHHHHHHHHHHHHHHHHHhhhcc-CcccccchHHHHHHHhHHHHHHHHHHHHHhcCcCccccccc
Q 006387 534 QSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEH-GWEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMV 612 (647)
Q Consensus 534 ~~~m~~~~g~~r~~~~l~~al~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~e~~~~l~~a~~~~~aal~R~ESRG~h~R~ 612 (647)
|++||+|+||+|++++|++|+++|++|++++.++...+ ....++++++++|++|||++|+++++|||.|+||||+|||+
T Consensus 473 ~~~m~~~~gi~R~~~~L~~a~~~l~~l~~~~~~~~~~~~~~~~n~~l~~~~e~~~~l~~a~~~~~~al~R~ESRG~H~R~ 552 (621)
T 2h88_A 473 QKTMQSHAAVFRTGSILQEGCEKLSQIYRDLAHLKTFDRGIVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHARE 552 (621)
T ss_dssp HHHHHHHSSSSBCHHHHHHHHHHHHHHHHGGGGEECCCCCSTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCSCBTTBCBT
T ss_pred HHHhhhceeEecCHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHhCcccccceecc
Confidence 99999999999999999999999999998875533221 12236788999999999999999999999999999999999
Q ss_pred CCCCCccC
Q 006387 613 DFPHVEEN 620 (647)
Q Consensus 613 D~P~~d~~ 620 (647)
|||++||+
T Consensus 553 D~p~~dd~ 560 (621)
T 2h88_A 553 DYKLRIDE 560 (621)
T ss_dssp TBCSCCCS
T ss_pred cCcccCcc
Confidence 99999998
No 2
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=100.00 E-value=5.8e-91 Score=774.48 Aligned_cols=519 Identities=44% Similarity=0.682 Sum_probs=407.9
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHH
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVR 164 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~ 164 (647)
..++||||||||+|||+||+.|++ | +|+||||....+|+|.+++||+++..++.|+++.|+.++++.+.++++++.++
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~ds~~~~~~d~l~~g~g~~d~~~v~ 84 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAVE 84 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-------------CCSHHHHHHHHHHHHHHTTTCCCHHHHH
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCChhhcCCCEEEecCCCCCHHHHHHHHHHhhcccCCHHHHH
Confidence 457999999999999999999999 9 99999999988899999999999887777889999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHcCCCcccCC----CCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEE
Q 006387 165 VVCTEGPDRIRELIAIGASFDRGE----DGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAID 240 (647)
Q Consensus 165 ~~~~~~~~~i~~l~~~Gv~~~~~~----~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~ 240 (647)
.+++++++.++||.++|++|.... +|.+.+..+++|+.+|+++..+.+|..+...|.+.+++..||+|++++.|++
T Consensus 85 ~~~~~~~~~i~~l~~~Gv~f~~~~~~~~~g~~~~~~~gg~~~~r~~~~~d~~g~~l~~~L~~~~~~~~gv~i~~~~~v~~ 164 (540)
T 1chu_A 85 FVASNARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSHRRILHAADATGREVETTLVSKALNHPNIRVLERTNAVD 164 (540)
T ss_dssp HHHHHHHHHHHHHHHTTCC--------------------------------------CCCHHHHHHCTTEEEECSEEEEE
T ss_pred HHHHhHHHHHHHHHHcCCCcccCcccCcCCccccccccccccCeEEEeCCCCHHHHHHHHHHHHHcCCCCEEEeCcEEEE
Confidence 999999999999999999998766 7777778889999999988878889999999999998756999999999999
Q ss_pred EEecCCCC---CCeEEEEEEEecCCCeEEEEEcCeEEECCCcccccCCCCCCCCCCcchHHHHHHHcCCeecCccccccc
Q 006387 241 LLTTLDGP---DAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFH 317 (647)
Q Consensus 241 l~~~~~g~---~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~~~~~~~~~~~tGdg~~~a~~aGa~l~~~e~~q~~ 317 (647)
|+.++++. ..+|.||.+.+..+|+...|+|+.||+||||++.+|..+++++.+||||+.||+++||.+.+|||+|||
T Consensus 165 L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~~~tGdG~~ma~~aGa~l~~~e~~q~h 244 (540)
T 1chu_A 165 LIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVANLEFNQFH 244 (540)
T ss_dssp EEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGGGSSSBSCGGGCSCHHHHHHHHTTCCEECTTCEEEE
T ss_pred EEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcccccCCCcCCCCCchHHHHHHHHcCCCCcChHHHhhc
Confidence 99842220 016999999876678888899999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCCCCccceeeecccCCCceEEeCCCCccccccccccccCchhHHHHHHHHHHHhcCCCeEEEecCC
Q 006387 318 PTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDDQLKKRNEKYVLLDISH 397 (647)
Q Consensus 318 p~~~~~~g~~~~p~~~~~~~~l~~e~~~~~g~~~vn~~G~rf~~~~~~~~~l~~rd~~~~~i~~~~~~~~~~~v~ld~~~ 397 (647)
|+.+..++. ..++++++++++|++++|.+|+|||++|++..+++|||+++++|..++.+++..++|+|.++
T Consensus 245 pt~~~~~~~---------~~~l~~e~~rg~g~~lvn~~G~RF~~~~~~~~el~~rd~v~~ai~~~~~~~~~~~v~ld~~~ 315 (540)
T 1chu_A 245 PTALYHPQA---------RNFLLTEALRGEGAYLKRPDGTRFMPDFDERGELAPRDIVARAIDHEMKRLGADCMFLDISH 315 (540)
T ss_dssp EEEECSTTC---------TTCBCCHHHHHTTCEEECTTSCBCGGGTCTTGGGSCHHHHHHHHHHHHHHHTCSCEEEECCS
T ss_pred CeeecCCCC---------CcceeehhhcCCceEEECCCCCCCcccCCcccccCcHHHHHHHHHHHHHhcCCceEEEeccc
Confidence 998864321 15788999999999999999999999999999999999999999999887666789999999
Q ss_pred CChhHHHhhChhHHHHHHHcCCCCCCCCeeeeeeeceecCceEECCCCCcccCceeecccccCCCCCCCCccchhhhHHH
Q 006387 398 KPTEKILSHFPNIAAECLKYGLDITSQPIPVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEA 477 (647)
Q Consensus 398 ~~~~~l~~~~~~~~~~~~~~G~d~~~~~i~v~p~~~~~~GGi~vD~~~~T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a 477 (647)
.+.+.+..++|++.+++.+.|+||.++|+||.|++||+||||+||.++||+||||||||||+|+|+||+||++||||++|
T Consensus 316 ~~~~~~~~~~~~i~~~~~~~Gid~~~~~i~v~p~~h~t~GGi~vd~~~~t~I~GLyAaGE~a~~g~hGanrl~gnsl~~~ 395 (540)
T 1chu_A 316 KPADFIRQHFPMIYEKLLGLGIDLTQEPVPIVPAAHYTCGGVMVDDHGRTDVEGLYAIGEVSYTGLHGANRMASNSLLEC 395 (540)
T ss_dssp SCSHHHHHHCHHHHHHHHTTTCCTTTSCEEEEEEEEEESCEEECCTTCBCSSBTEEECGGGEECSSSTTSCCTTHHHHHH
T ss_pred CCHHHHHHhhhhHHHHHHHhCcCCCCCCeEeehHHheecCcEEECCCCCCccCCEEeccccccccccCCCcCcchhHHHH
Confidence 99888999999999999999999999999999999999999999999999999999999999899999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcccccccccccccccccCcccccccchhhhhcHHHHHHHHHHHHHhcCccccCHHHHHHHHHHH
Q 006387 478 LVFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRI 557 (647)
Q Consensus 478 ~v~G~~Ag~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m~~~~g~~r~~~~l~~al~~l 557 (647)
+|||++||++|++++..... ......+... ... . ......+.+++++||++||+|+||+|++++|++|+++|
T Consensus 396 ~vfG~~Ag~~aa~~~~~~~~-~~~~~~~~~~----~~~-~--~~~~~~~~~~~~~l~~~m~~~~gi~R~~~~L~~a~~~l 467 (540)
T 1chu_A 396 LVYGWSAAEDITRRMPYAHD-ISTLPPWDES----RVE-N--PDERVVIQHNWHELRLFMWDYVGIVRTTKRLERALRRI 467 (540)
T ss_dssp HHHHHHHHHHHHHHC---CC-CCCBCCCCCC----CBC-C--HHHHHHHHHHHHHHHHHHHHHSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccc-cccchhhhhh----ccc-C--cccccchHHHHHHHHHHHHHhhCcccCHHHHHHHHHHH
Confidence 99999999999887532110 0000001100 000 0 01112466788999999999999999999999999999
Q ss_pred HHHHHHHHHhhhccCcccccchHHHHHHHhHHHHHHHHHHHHHhcCcCcccccccCCCCCccCCCCCeeec
Q 006387 558 DELEAEWETYLFEHGWEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFPHVEENKRLPTIIL 628 (647)
Q Consensus 558 ~~l~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~a~~~~~aal~R~ESRG~h~R~D~P~~d~~~~~~~~~~ 628 (647)
++|++++.....+ .....+++|++||+++|+++++|||.|+||||+|||+|||++||+ |.++++.
T Consensus 468 ~~l~~~~~~~~~~-----~~~~~~~~e~~~~~~~a~~~~~~al~R~ESRG~h~r~D~p~~~~~-~~~~~~~ 532 (540)
T 1chu_A 468 TMLQQEIDEYYAH-----FRVSNNLLELRNLVQVAELIVRCAMMRKESRGLHFTLDYPELLTH-SGPSILS 532 (540)
T ss_dssp HHHHHHHHHHHTT-----BCCCHHHHHHHHHHHHHHHHHHHHHHCCSCBTTBCBTTCCSCCSS-CCCCEEC
T ss_pred HHHHHHHHHHhhc-----ccccHHHHHHHHHHHHHHHHHHHHHhCCCcceeeecccCCCcChh-hhceEEc
Confidence 9998877643211 112246789999999999999999999999999999999999998 5554543
No 3
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=100.00 E-value=5.7e-91 Score=786.71 Aligned_cols=522 Identities=33% Similarity=0.492 Sum_probs=452.1
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCC-----CCCHHHHHHHHHHhcccCCC
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCP-----SDSVESHMQDTIVAGAYLCD 159 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~-----~d~~~~~~~~~~~~g~~~~~ 159 (647)
+.++||||||||+|||+||+.|++.| +|+||||....+|+|.+++||+.+.... .|+++.|+.|+++.+.+++|
T Consensus 3 ~~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~g~~ds~~~~~~dt~~~g~~~~d 82 (660)
T 2bs2_A 3 VQYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGMQASLGNSKMSDGDNEDLHFMDTVKGSDWGCD 82 (660)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGGSGGGGCCSCEECCCCCSGGGTTCCHHHHHHHHHHHTTTCSC
T ss_pred cccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCCCCcccccCCCeEeccCCcccCCCCCHHHHHHHHHHhcCCCCC
Confidence 45799999999999999999999999 9999999998889999999999876654 68999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHcCCCcccCCCCC---------------------ccccccCCccccceeeccCCchHHHHH
Q 006387 160 DETVRVVCTEGPDRIRELIAIGASFDRGEDGN---------------------LHLAREGGHSHHRIVHAADMTGREIER 218 (647)
Q Consensus 160 ~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~g~---------------------~~~~~~gg~~~~r~~~~~~~~g~~~~~ 218 (647)
++.++.+++++++.++||.++|++|.+..+|. +....+++++.+|.++..+.+|..++.
T Consensus 83 ~~~v~~~~~~s~~~i~~L~~~Gv~f~~~~~G~~~~~~~g~~~~~l~~~e~~~~~~~~~~gg~~~~R~~~~~d~tG~~l~~ 162 (660)
T 2bs2_A 83 QKVARMFVNTAPKAIRELAAWGVPWTRIHKGDRMAIINAQKTTITEEDFRHGLIHSRDFGGTKKWRTCYTADATGHTMLF 162 (660)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCBCCSEEEECCCSSCCCEEEECGGGTTSBCCBCCTTCSSCCEECSTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCceecCCCcccccccccccccccchhhhhhhccccccccccceeEeeCCCCHHHHHH
Confidence 99999999999999999999999998776654 455668899999999888889999999
Q ss_pred HHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccccCCCCCCCCCCcchHH
Q 006387 219 ALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGM 298 (647)
Q Consensus 219 ~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~~~~~~~~~~~tGdg~ 298 (647)
.|.+.+.+. ||+|++++.|++|+.+ ++ +|.||.+.++.+|+.+.|+|+.|||||||++.+|..+++++.+||||+
T Consensus 163 ~L~~~a~~~-gv~i~~~~~v~~L~~~-~g---~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~y~~tt~~~~~tGdG~ 237 (660)
T 2bs2_A 163 AVANECLKL-GVSIQDRKEAIALIHQ-DG---KCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCEGTGT 237 (660)
T ss_dssp HHHHHHHHH-TCEEECSEEEEEEEEE-TT---EEEEEEEEETTTCCEEEEECSEEEECCCCCGGGSSSBSSCTTCSCHHH
T ss_pred HHHHHHHhC-CCEEEECcEEEEEEec-CC---EEEEEEEEECCCCcEEEEEcCEEEEccCcchhhcCCCCCCCCcccHHH
Confidence 999999874 9999999999999986 55 899999988778888889999999999999999999999999999999
Q ss_pred HHHHHcCC-eecCccccccccccccCCCCCCCCCCCCCccceeeecccCCCceEEeCCCCccccccccc-cccCchhHHH
Q 006387 299 AMAHRAQA-VISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDER-AELAPRDVVA 376 (647)
Q Consensus 299 ~~a~~aGa-~l~~~e~~q~~p~~~~~~g~~~~p~~~~~~~~l~~e~~~~~g~~~vn~~G~rf~~~~~~~-~~l~~rd~~~ 376 (647)
.||+++|+ .+.+|||+||||+.+... .++++++++++|++++|.+|+|||++|.+. .+++|||+++
T Consensus 238 ~mA~~aGa~~l~~me~~q~hPt~~~~~------------~~l~se~~rg~g~ilvn~~G~RF~~~y~p~~~ela~rdvv~ 305 (660)
T 2bs2_A 238 AIALETGIAQLGNMEAVQFHPTPLFPS------------GILLTEGCRGDGGILRDVDGHRFMPDYEPEKKELASRDVVS 305 (660)
T ss_dssp HHHHTTSSSCEECTTCEEEESCBBTTT------------CCBCCTHHHHHTCEEECTTCCBCHHHHCTTTGGGSCHHHHH
T ss_pred HHHHHcCCChhcCchhheecccccCCC------------cceecccccCCCcEEECCCCCCcCcccCcccccccchHHHH
Confidence 99999999 999999999999987532 356788999999999999999999999776 7899999999
Q ss_pred HHHHHHHHhcC------CCeEEEecCCCChhHHHhhChhHHHHHHH-cCCCCCCCCeeeeeeeceecCceEECCCCCccc
Q 006387 377 RSIDDQLKKRN------EKYVLLDISHKPTEKILSHFPNIAAECLK-YGLDITSQPIPVVPAAHYMCGGVRAGLQGETNV 449 (647)
Q Consensus 377 ~~i~~~~~~~~------~~~v~ld~~~~~~~~l~~~~~~~~~~~~~-~G~d~~~~~i~v~p~~~~~~GGi~vD~~~~T~i 449 (647)
++|..++.++. ..++|+|+++++.+.+..++|++.+++.+ .|+||.++|+||.|+.||+||||+||.++||+|
T Consensus 306 rai~~~~~~g~g~~~~~~~~v~ld~~~~~~~~~~~~~p~i~e~~~~~~GiD~~~~~ipv~p~~hyt~GGi~vd~~~~v~I 385 (660)
T 2bs2_A 306 RRMIEHIRKGKGVQSPYGQHLWLDISILGRKHIETNLRDVQEICEYFAGIDPAEKWAPVLPMQHYSMGGIRTDYRGEAKL 385 (660)
T ss_dssp HHHHHHHHTTTSBCCTTCCBEEEECGGGCHHHHHHHSHHHHHHHHHTSCCCTTTSCEEECCEEEEECCEEECCTTSBCSS
T ss_pred HHHHHHHHhcCCccCCCCCEEEEECCCCCHHHHHHHhHHHHHHHHHhcCCCCcccceEeeeeeeeccceEEECCCCceec
Confidence 99999987653 24699999999999999999999999998 599999999999999999999999999999999
Q ss_pred CceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhhcccccccccccccccccCcccccccch-----hhhh
Q 006387 450 RGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMH-----NILR 524 (647)
Q Consensus 450 pGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 524 (647)
|||||||||+|+|+||+|||+||||++|+|||++||++|+++++....+.+.. ....... ....++. ....
T Consensus 386 pGLYAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~ 461 (660)
T 2bs2_A 386 KGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHCANTQVDLETK--TLEKFVK--GQEAYMKSLVESKGTE 461 (660)
T ss_dssp BTEEECGGGEECCSSTTCCCTTHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHH--HHHHHHH--HHHHHHHHHHHCCCCB
T ss_pred CCEEeccccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHhhhcCcccccc--cchhHHH--HHHHHHHHHhhccCCC
Confidence 99999999998899999999999999999999999999999875221110000 0000000 0000000 0123
Q ss_pred cHHHHHHHHHHHHHhcCccccCHHHHHHHHHHHHHHHHHHHHhhhcc-CcccccchHHHHHHHhHHHHHHHHHHHHHhcC
Q 006387 525 RTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEH-GWEQTFVGLEACEMRNLFCCAKLVVSSALARH 603 (647)
Q Consensus 525 ~~~~~~~~l~~~m~~~~g~~r~~~~l~~al~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~e~~~~l~~a~~~~~aal~R~ 603 (647)
.+.+++.+||++||+|+||+|++++|++|+++|++|++++.++...+ ....++++++++|++|||++|++|++|||.|+
T Consensus 462 ~~~~~~~~l~~~m~~~~gi~R~~~~L~~a~~~l~~l~~~~~~~~~~~~~~~~n~~l~~~~e~~~~l~~a~~~~~~Al~R~ 541 (660)
T 2bs2_A 462 DVFKIKNRMKDVMDDNVGIFRDGPHLEKAVKELEELYKKSKNVGIKNKRLHANPELEEAYRVPMMLKVALCVAKGALDRT 541 (660)
T ss_dssp CHHHHHHHHHHHHHHHSSSSBCHHHHHHHHHHHHHHHHHHTTBCCSCCCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHhcCceecCHHHHHHHHHHHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 57789999999999999999999999999999999998875532221 22236788999999999999999999999999
Q ss_pred cCcccccccCCCCCccCCCCCeeec
Q 006387 604 ESRGLHYMVDFPHVEENKRLPTIIL 628 (647)
Q Consensus 604 ESRG~h~R~D~P~~d~~~~~~~~~~ 628 (647)
||||+|||+|||++||++|+++++.
T Consensus 542 ESRG~H~R~D~p~~dd~~~~~~~~~ 566 (660)
T 2bs2_A 542 ESRGAHNREDYPKRDDINWLNRTLA 566 (660)
T ss_dssp SCBTTBCBTTBCSEETTTCCEEEEE
T ss_pred CCceeeecccCcccCchhhceEEEE
Confidence 9999999999999999988877653
No 4
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=100.00 E-value=4.1e-89 Score=766.53 Aligned_cols=524 Identities=35% Similarity=0.532 Sum_probs=449.6
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCC--CCCHHHHHHHHHHhcccCCCHHH
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCP--SDSVESHMQDTIVAGAYLCDDET 162 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~--~d~~~~~~~~~~~~g~~~~~~~~ 162 (647)
+.++||||||||+||++||+.|++.| +|+||||....+|++.+++||+...... .|+++.++.++++.+.++++++.
T Consensus 5 ~~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~d~~~ 84 (588)
T 2wdq_A 5 VREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDA 84 (588)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHH
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCCCHHH
Confidence 45799999999999999999999999 9999999998888888999999876554 68899999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHcCCCcccCCCCCccccccCCcc-------ccceeeccCCchHHHHHHHHHHHHcCCCcEEEcc
Q 006387 163 VRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHS-------HHRIVHAADMTGREIERALLEAVVSDPNISVFEH 235 (647)
Q Consensus 163 ~~~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~-------~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~ 235 (647)
+..+++++++.++||.++|++|....+|.+....+++++ .+|.++..+.+|..++..|.+.+.+. ||+|+++
T Consensus 85 v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~~~-gv~i~~~ 163 (588)
T 2wdq_A 85 IEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKN-HTTIFSE 163 (588)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHHT-TCEEEET
T ss_pred HHHHHHhHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHHhC-CCEEEeC
Confidence 999999999999999999999998888887777778887 88888888889999999999999885 9999999
Q ss_pred eEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccccCCCCCCCCCCcchHHHHHHHcCCeecCccccc
Q 006387 236 HFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQ 315 (647)
Q Consensus 236 ~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~~~~~~~~~~~tGdg~~~a~~aGa~l~~~e~~q 315 (647)
+.|++|+.++++ +|.||.+.+..+|+...|+|+.||+||||++.+|..+++++.+||||+.||+++|+.+.+|||+|
T Consensus 164 ~~v~~L~~~~~g---~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~y~~~~~~~~~tGdG~~ma~~aGa~l~~me~~q 240 (588)
T 2wdq_A 164 WYALDLVKNQDG---AVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQ 240 (588)
T ss_dssp EEEEEEEECTTS---CEEEEEEEETTTCCEEEEEEEEEEECCCCCGGGSSSBSSCTTCCCHHHHHHHHTTCCEECTTCEE
T ss_pred cEEEEEEECCCC---EEEEEEEEEcCCCeEEEEEcCEEEECCCCCccccCCcCCCCCchHHHHHHHHHcCCCEeChhHhh
Confidence 999999986345 79999998766788788999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCCCCccceeeecccCCCceEEeCCCCccccccccc-cccCchhHHHHHHHHHHHhcCC------
Q 006387 316 FHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDER-AELAPRDVVARSIDDQLKKRNE------ 388 (647)
Q Consensus 316 ~~p~~~~~~g~~~~p~~~~~~~~l~~e~~~~~g~~~vn~~G~rf~~~~~~~-~~l~~rd~~~~~i~~~~~~~~~------ 388 (647)
|||+.+... .++++++++++|++++|.+|+|||++|++. .++++||+++++|..++.+++.
T Consensus 241 ~hpt~~~~~------------~~l~~e~~rg~g~ilvn~~G~RF~~~~~~~~~el~~rd~v~~ai~~~~~~~~~~~~~~~ 308 (588)
T 2wdq_A 241 FHPTGIAGA------------GVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCDGPWG 308 (588)
T ss_dssp EEEEEETTT------------CCBCCTHHHHTTCEEECTTCCCTHHHHCTTTGGGSCHHHHHHHHHHHHHTTCSBCSTTC
T ss_pred eecceecCC------------cceeeehhccCCcEEECCCCCCCccccCcccchhccHHHHHHHHHHHHHhCCCccCCCC
Confidence 999987532 346788899999999999999999998764 6899999999999999876542
Q ss_pred CeEEEecCCCChhHHHhhChhHHHHHHHc-CCCCCCCCeeeeeeeceecCceEECCCCCc----------ccCceeeccc
Q 006387 389 KYVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVPAAHYMCGGVRAGLQGET----------NVRGLYVAGE 457 (647)
Q Consensus 389 ~~v~ld~~~~~~~~l~~~~~~~~~~~~~~-G~d~~~~~i~v~p~~~~~~GGi~vD~~~~T----------~ipGLyAaGe 457 (647)
..+|+|.++++.+.+.+++|++.+++++. |+||.++|++|.|+.||+||||+||.++|| +|||||||||
T Consensus 309 ~~v~ld~~~~~~~~~~~~~~~i~e~~~~~~GiD~~~~~i~v~p~~h~t~GGi~vd~~~~vl~~~~~~~g~~I~GLyAaGe 388 (588)
T 2wdq_A 309 PHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGE 388 (588)
T ss_dssp SBEEEECGGGHHHHHHHHCHHHHHHHHHHTCCCTTTSCEEEEEEEEEECCBEEBCTTCEEEEECTTSCEEEEEEEEECGG
T ss_pred CeEEEecccCCHHHHHHHhhHHHHHHHHhCCCCCCCCcEEEeccccccCceEEECCCCCCcccccccCCCeeCCceeCcc
Confidence 46899999988888999999999999997 999999999999999999999999999998 8999999999
Q ss_pred ccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhhcccccccccccccccccCcccccccch--hhhhcHHHHHHHHHH
Q 006387 458 VACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMH--NILRRTKEVRKELQS 535 (647)
Q Consensus 458 ~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~ 535 (647)
++|+|+||+|||+||||++|+|||++||++|+++++.... ......+.... ... ....+. .....+.+++.+||+
T Consensus 389 ~a~~g~hG~nrl~gnsl~~~~vfG~~Ag~~aa~~~~~~~~-~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~l~~ 465 (588)
T 2wdq_A 389 IACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQGA-LRDASESDVEA-SLD-RLNRWNNNRNGEDPVAIRKALQE 465 (588)
T ss_dssp GEECSSSTTSCCTTHHHHHHHHHHHHHHHTHHHHHHHHCC-CCCCCHHHHHH-TTH-HHHHHHHCCSSBCHHHHHHHHHH
T ss_pred ccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCc-ccccchhhhhh-HHH-HHHHhhccCCCcCHHHHHHHHHH
Confidence 9888999999999999999999999999999988743210 00000000000 000 000000 012357788999999
Q ss_pred HHHhcCccccCHHHHHHHHHHHHHHHHHHHHhhhcc-CcccccchHHHHHHHhHHHHHHHHHHHHHhcCcCcccccccCC
Q 006387 536 IMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEH-GWEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDF 614 (647)
Q Consensus 536 ~m~~~~g~~r~~~~l~~al~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~e~~~~l~~a~~~~~aal~R~ESRG~h~R~D~ 614 (647)
+||+|+||+|++++|++|+++|++|++++..+...+ ....++++++++|++||+++|+++++|||.|+||||+|||+||
T Consensus 466 ~m~~~~gi~R~~~~L~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~~e~~~~~~~a~~~~~~al~R~ESRG~H~r~D~ 545 (588)
T 2wdq_A 466 CMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDF 545 (588)
T ss_dssp HHHHHSSSSBCHHHHHHHHHHHHHHHHHHTTBCCCCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHCCSCBTTBCBSSS
T ss_pred HHhhcCcEecCHHHHHHHHHHHHHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhCccceeeeecccC
Confidence 999999999999999999999999988875432211 1223578899999999999999999999999999999999999
Q ss_pred CCCccCCCCCeeec
Q 006387 615 PHVEENKRLPTIIL 628 (647)
Q Consensus 615 P~~d~~~~~~~~~~ 628 (647)
|++||++|+++++.
T Consensus 546 p~~~~~~~~~~~~~ 559 (588)
T 2wdq_A 546 PDRDDENWLCHSLY 559 (588)
T ss_dssp CSCCHHHHSSEEEE
T ss_pred CccChhhhheeEEE
Confidence 99999877766553
No 5
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=100.00 E-value=2.2e-87 Score=753.85 Aligned_cols=522 Identities=32% Similarity=0.490 Sum_probs=452.2
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC---CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHH
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG---TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDET 162 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G---~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~ 162 (647)
+.++||||||||+||++||+.|++.| +|+||||....++++.+++||+.......|+++.++.++++.+.++++++.
T Consensus 3 ~~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~ 82 (602)
T 1kf6_A 3 TFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDV 82 (602)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHH
T ss_pred cccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHH
Confidence 35689999999999999999999987 899999998878888889999988777789999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEE
Q 006387 163 VRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLL 242 (647)
Q Consensus 163 ~~~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~ 242 (647)
++.+++++++.++||.++|++|....+|.+....+++|+.+|.++..+.+|..+...|.+.+.+..+|+|++++.|++|+
T Consensus 83 v~~~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~ 162 (602)
T 1kf6_A 83 VDYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDIL 162 (602)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEE
Confidence 99999999999999999999999888888777788899999999988889999999999999875349999999999999
Q ss_pred ecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccccCCCCCCCCCCcchHHHHHHHcCCeecCcccccccccccc
Q 006387 243 TTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALA 322 (647)
Q Consensus 243 ~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~~~~~~~~~~~tGdg~~~a~~aGa~l~~~e~~q~~p~~~~ 322 (647)
.+ ++ +|.||.+.+..+|+...|+|+.||+|||+++.+|..++++..++|||+.|++++|+.+.+|||+||||+.+.
T Consensus 163 ~~-~g---~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~~~~~~~~tGdgi~~a~~aGa~~~~~e~~qfhPt~~~ 238 (602)
T 1kf6_A 163 VD-DG---HVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALSHGVPLRDMEFVQYHPTGLP 238 (602)
T ss_dssp EE-TT---EEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSSSBSSCTTCSCHHHHHHHTTTCCEESTTCEEEEEEECT
T ss_pred Ee-CC---EEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccccCcCCCCCcccHHHHHHHHcCCCccChhHhhccccccC
Confidence 87 55 899998887677887889999999999999999998999999999999999999999999999999999874
Q ss_pred CCCCCCCCCCCCCccceeeecccCCCceEEeCCCCccccccc---------c-cc--ccCchhHHHHHHHHHHHhcCC--
Q 006387 323 DEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYD---------E-RA--ELAPRDVVARSIDDQLKKRNE-- 388 (647)
Q Consensus 323 ~~g~~~~p~~~~~~~~l~~e~~~~~g~~~vn~~G~rf~~~~~---------~-~~--~l~~rd~~~~~i~~~~~~~~~-- 388 (647)
.. .++++++++++|++++|.+|+|||++|+ | .. ++++||++++++..++.++.+
T Consensus 239 ~~------------~~l~~e~~rg~g~~lvn~~G~RF~~~y~~~~~~~~~~p~~~~~el~~rd~v~~ai~~~~~~g~g~~ 306 (602)
T 1kf6_A 239 GS------------GILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWHEWRKGNTIS 306 (602)
T ss_dssp TT------------CCBCCTHHHHTTCEEECTTCCCGGGGTTTCSCCCSSCCCTTSGGGSCHHHHHHHHHHHHHHTCSBC
T ss_pred CC------------cceechhhcCCceEEECCCCCCccccccccccccccCCcccccccccHHHHHHHHHHHHHhcCCcc
Confidence 32 4678899999999999999999999997 4 34 899999999999999887542
Q ss_pred ----CeEEEecCCCChhHHHhhChhHHHHHHH-cCCCCCCCCeeeeeeeceecCceEECCCCCcccCceeecccccCCCC
Q 006387 389 ----KYVLLDISHKPTEKILSHFPNIAAECLK-YGLDITSQPIPVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGL 463 (647)
Q Consensus 389 ----~~v~ld~~~~~~~~l~~~~~~~~~~~~~-~G~d~~~~~i~v~p~~~~~~GGi~vD~~~~T~ipGLyAaGe~a~~g~ 463 (647)
..||+|.++++.+.+.+++|++.+++.+ .|+||.++|++|.|+.||+||||+||.++||+||||||||||+|+|+
T Consensus 307 ~~~~~~v~ld~~~~~~~~l~~~~~~~~~~~~~~~G~D~~~~pi~v~p~~h~t~GGi~vd~~~~~~IpGLyAaGe~a~~g~ 386 (602)
T 1kf6_A 307 TPRGDVVYLDLRHLGEKKLHERLPFICELAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGL 386 (602)
T ss_dssp CTTCCBEEEECGGGCHHHHHHHCHHHHHHHHHHHCCCTTTSCEEEEEEEEEECCEEECCTTSBCSSBTEEECGGGEECSS
T ss_pred CCCCcEEEeecccCCHHHHHHHHHHHHHHHHHhcCCCCCcCceEEehhheeeCCeEEECCCCccccCCEEEccccccccc
Confidence 4799999999999999999999999988 59999999999999999999999999999999999999999998899
Q ss_pred CCCCccchhhhHHHHHHHHHHHHHHHHhhhcccccccccccccccccCcccccccch-----hhhhcHHHHHHHHHHHHH
Q 006387 464 HGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMH-----NILRRTKEVRKELQSIMW 538 (647)
Q Consensus 464 ~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~m~ 538 (647)
||+|||+||||++|+|||++||++|++++.... +.... ..... .+. ...++. .....+.+++.+||++||
T Consensus 387 hGanrl~gnsl~~~~vfGr~Ag~~aa~~~~~~~-~~~~~-~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~m~ 461 (602)
T 1kf6_A 387 HGANRLGSNSLAELVVFGRLAGEQATERAATAG-NGNEA-AIEAQ-AAG--VEQRLKDLVNQDGGENWAKIRDEMGLAME 461 (602)
T ss_dssp STTSCCTTHHHHHHHHHHHHHHHHHHHHHHSCC-CCCHH-HHHHH-HHH--HHHHHHHHHHCCCCBCHHHHHHHHHHHHH
T ss_pred cCCCCCccHHHHHHHHHHHHHHHHHHHhhhccC-CCCcc-hhhhh-hHH--HHHHHhhhhccCCCcCHHHHHHHHHHHHH
Confidence 999999999999999999999999999863321 10000 00000 000 000000 111357789999999999
Q ss_pred hcCccccCHHHHHHHHHHHHHHHHHHHHhhhcc-CcccccchHHHHHHHhHHHHHHHHHHHHHhcCcCcccccccC--CC
Q 006387 539 RYVGIVRSTTSLQTAEWRIDELEAEWETYLFEH-GWEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVD--FP 615 (647)
Q Consensus 539 ~~~g~~r~~~~l~~al~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~e~~~~l~~a~~~~~aal~R~ESRG~h~R~D--~P 615 (647)
+|+||+|++++|++|+++|++|++++.++...+ ....++++++++|++||+++|++|++|||.|+||||+|||+| ||
T Consensus 462 ~~~gi~R~~~~L~~a~~~l~~l~~~~~~~~~~~~~~~~n~~l~~~~e~~~~~~~a~~~~~~al~R~ESRG~H~r~D~~~p 541 (602)
T 1kf6_A 462 EGCGIYRTPELMQKTIDKLAELQERFKRVRITDTSSVFNTDLLYTIELGHGLNVAECMAHSAMARKESRGAHQRLDEGCT 541 (602)
T ss_dssp HHSSSSBCHHHHHHHHHHHHHHHHHHTTBCCCCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHCCSCBTTBCBCSTTCS
T ss_pred hcCCeecCHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhCcCccceEEecccCCC
Confidence 999999999999999999999998875432211 112367889999999999999999999999999999999999 99
Q ss_pred CCccCCCCCeeec
Q 006387 616 HVEENKRLPTIIL 628 (647)
Q Consensus 616 ~~d~~~~~~~~~~ 628 (647)
++||++|++++++
T Consensus 542 ~~d~~~~~~~~~~ 554 (602)
T 1kf6_A 542 ERDDVNFLKHTLA 554 (602)
T ss_dssp SCCTTTCCEEEEE
T ss_pred ccCchhhheEEEE
Confidence 9999988777664
No 6
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=100.00 E-value=4e-85 Score=738.39 Aligned_cols=529 Identities=17% Similarity=0.189 Sum_probs=429.4
Q ss_pred ccccCEEEECcchHHHHHHHHHHhc------C-CeEEEEecCCCCCCccccCC--CeeeecCCCCCHHHHHHHHHHhccc
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKH------G-TVAVITKAEPHESNTNYAQG--GVSAVLCPSDSVESHMQDTIVAGAY 156 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~------G-~V~llEk~~~~~G~t~~a~G--gi~~~~~~~d~~~~~~~~~~~~g~~ 156 (647)
..++||||||||+|||+||+.|++. | +|+||||....++++ +++| |+++..+ .++++.++.+++..+.+
T Consensus 20 ~~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~s~s-~AqG~~gi~a~l~-~ds~e~~~~~~~~~~~g 97 (662)
T 3gyx_A 20 EHSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLERSGA-VAQGLSAINTYLG-DNNADDYVRMVRTDLMG 97 (662)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTTCST-TTTCEEEECCCCT-TSCHHHHHHHHHHHTTT
T ss_pred eEEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCCCcc-cccCcchheeecC-CCCHHHHHHHHHHhcCC
Confidence 4579999999999999999999997 9 999999998866555 6788 7777665 78899999999999999
Q ss_pred CCCHHHHHHHHHHhHHHHHHHHHcCCCcccC-CCCCcc----------ccccCCccccceeeccCCchHHHHHHHHHHHH
Q 006387 157 LCDDETVRVVCTEGPDRIRELIAIGASFDRG-EDGNLH----------LAREGGHSHHRIVHAADMTGREIERALLEAVV 225 (647)
Q Consensus 157 ~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~-~~g~~~----------~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~ 225 (647)
+++++.++.+++++++.++||.++|++|.+. ++|.+. +...++|+.+|..+..+.+|..+...|.+.++
T Consensus 98 l~d~~~v~~l~~~a~~~i~~L~~~Gv~f~~~~~~G~~~~g~~~~~fg~~~~~gg~~~~r~~~~~~~~G~~i~~~L~~~a~ 177 (662)
T 3gyx_A 98 LVREDLIYDLGRHVDDSVHLFEEWGLPVWIKDEHGHNLDGAQAKAAGKSLRNGDKPVRSGRWQIMINGESYKVIVAEAAK 177 (662)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHTCCBCEECSSSCEECHHHHHHHTCCTTTTCCBCCSSTTCEEEEETSHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHcCCCceecCCCCccccchhhhccccccccCccccccceecccCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999886 677654 34568888888766666678889999998888
Q ss_pred cC-CCcEEEcceEEEEEEecCC--CCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccccCCCCCC---------CCCC
Q 006387 226 SD-PNISVFEHHFAIDLLTTLD--GPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTN---------PLVA 293 (647)
Q Consensus 226 ~~-~gv~i~~~~~v~~l~~~~~--g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~~~~~~~---------~~~~ 293 (647)
+. .||+|++++.|++|+.+++ + +|.||.+.+..+|+...|+|+.|||||||++++|..+++ ++.+
T Consensus 178 ~~~~gV~i~~~~~v~dLi~~~~~~g---~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~~y~~~t~~~~~~~~~~~~~~ 254 (662)
T 3gyx_A 178 NALGQDRIIERIFIVKLLLDKNTPN---RIAGAVGFNLRANEVHIFKANAMVVACGGAVNVYRPRSVGEGMGRAWYPVWN 254 (662)
T ss_dssp HHHCTTTEECSEEECCCEECSSSTT---BEEEEEEEESSSSCEEEEECSEEEECCCCBCSSSCCSCCSGGGGCCSSCTTC
T ss_pred hcCCCcEEEEceEEEEEEEeCCccc---eEEEEEEEEcCCCcEEEEEeCEEEECCCcccccccCcCCccccccccCCCCC
Confidence 74 2899999999999998754 3 899999988778888899999999999999999876554 8899
Q ss_pred cchHHHHHHHcCCeecCccccccccccccCCCCCCCCCCCCCccceeeecccCCCceEEeCCCCcccccccccc------
Q 006387 294 TGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA------ 367 (647)
Q Consensus 294 tGdg~~~a~~aGa~l~~~e~~q~~p~~~~~~g~~~~p~~~~~~~~l~~e~~~~~g~~~vn~~G~rf~~~~~~~~------ 367 (647)
||||++||+++||.+.+||| ||||+.+.+... |. ...++++| ++++|.+|+|||++|+|..
T Consensus 255 tGdG~~mA~~aGA~l~~me~-QfhPt~~~~~~~---p~---~~~~Lise------~ilvn~~GeRFm~~~~p~~~~~~~~ 321 (662)
T 3gyx_A 255 AGSTYTMCAQVGAEMTMMEN-RFVPARFKDGYG---PV---GAWFLLFK------AKATNCKGEDYCATNRAMLKPYEER 321 (662)
T ss_dssp BSHHHHHHHTTTCEEECTTC-CBCCEEETTTCC---CC---HHHHHHHC------CCEECTTSCCHHHHTGGGGHHHHTT
T ss_pred cchHHHHHHHhCCcccCCCe-eEeccccccCCC---CC---CceEEEee------eEEECCCCCEecCCcCchhhccccc
Confidence 99999999999999999997 999999864221 11 11466665 6999999999999998876
Q ss_pred -----ccCchhHHHHHHHHHHHhcCCCeEEEecCC--------CChhH-----------HHhhChhHHHHHHHcCCCCCC
Q 006387 368 -----ELAPRDVVARSIDDQLKKRNEKYVLLDISH--------KPTEK-----------ILSHFPNIAAECLKYGLDITS 423 (647)
Q Consensus 368 -----~l~~rd~~~~~i~~~~~~~~~~~v~ld~~~--------~~~~~-----------l~~~~~~~~~~~~~~G~d~~~ 423 (647)
||+|||+++++|..++.+++ ++||||+++ ++.+. +.++||.+...+...|+||.+
T Consensus 322 ~y~~~eLapRDvvsrai~~e~~~G~-g~v~LD~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~i~~~~~~~giD~~~ 400 (662)
T 3gyx_A 322 GYAKGHVIPTCLRNHMMLREMREGR-GPIYMDTKTALQTSFATMSPAQQKHLEAEAWEDFLDMCVGQANLWAATNCAPEE 400 (662)
T ss_dssp TSSTTTCCCHHHHTHHHHHHHHTTC-CCCEECHHHHHHHHTTTSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCCTTT
T ss_pred cccccccCchHHHHHHHHHHHHcCC-CcEEEEccCcchhcccccCHHHHHhhhhhhHHHHHHhChHHHHHHHHcCCCccc
Confidence 69999999999999998854 679999987 55443 345689999999999999999
Q ss_pred CCeeeeeeeceecCc------eEEC--------------------CCCCcccCceeecccccCCCCCCCCccchhhhHHH
Q 006387 424 QPIPVVPAAHYMCGG------VRAG--------------------LQGETNVRGLYVAGEVACTGLHGANRLASNSLLEA 477 (647)
Q Consensus 424 ~~i~v~p~~~~~~GG------i~vD--------------------~~~~T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a 477 (647)
+||||.|++||+||| |+|| .+++|+||||||||||+|+++||+ ++|||+++
T Consensus 401 ~pipV~P~~Hy~mGG~~~~~Gi~vd~~~~~~~~~~~~~~~~~~~~~~~~t~v~gl~a~Ge~~~~~~hg~---~~~sl~~g 477 (662)
T 3gyx_A 401 RGSEIMPTEPYLLGSHSGCCGIWASGPDEAWVPEDYKVRAANGKVYNRMTTVEGLWTCADGVGASGHKF---SSGSHAEG 477 (662)
T ss_dssp CCEEEEECCCBBCSSSSCCCEECCCCCCCTTSCGGGCCCCTTSCCCTTBCSSBTEECCSSSBCSCCCCH---HHHHHHHH
T ss_pred CceeeeeccceecccccccCceeecCccccccccccccccccccccCCCCccCCeEeCccccccccCcc---HhHHHHHH
Confidence 999999999999996 9999 788999999999999999999996 78888875
Q ss_pred HHHHHHHHHHHHHhhhccc-c-cc--ccccccccc-ccCccc-c--c-----ccchhhhhcHHHHHHHHHHHHHhcCc--
Q 006387 478 LVFARRAVQPSIDHKKSTS-I-DL--SASNWWTRT-VVPKSL-G--C-----NVMHNILRRTKEVRKELQSIMWRYVG-- 542 (647)
Q Consensus 478 ~v~G~~Ag~~a~~~~~~~~-~-~~--~~~~~~~~~-~~~~~~-~--~-----~~~~~~~~~~~~~~~~l~~~m~~~~g-- 542 (647)
.++|+ .|++|++... . .. ++....... ..+... . . ..+.+....+.+++.+||++||+|+|
T Consensus 478 ~~ag~----~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~~M~~~~g~~ 553 (662)
T 3gyx_A 478 RIVGK----QMVRWYLDHKDFKPEFVETAEELKTLIYRPYYNYEKGKGASTCPVVNPEYISPKNFMMRLIKCTDEYGGGV 553 (662)
T ss_dssp HHHHH----HHHHHHHHTCSCCCCCSSCHHHHHHHHTHHHHHHHHHGGGCSSSSSCSSSBCHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHH----HHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHhhhhhccccccccccCCCCcCHHHHHHHHHHHHHHhcCCC
Confidence 55555 4455554321 0 00 000000000 000000 0 0 00001124688999999999999999
Q ss_pred --cccCHH-HHHHHHHHHHHHHHHHHHhhhccCcccccchHHHHHHHhHHHHHHHHHHHHHhcCcCc--ccccccCCCCC
Q 006387 543 --IVRSTT-SLQTAEWRIDELEAEWETYLFEHGWEQTFVGLEACEMRNLFCCAKLVVSSALARHESR--GLHYMVDFPHV 617 (647)
Q Consensus 543 --~~r~~~-~l~~al~~l~~l~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~a~~~~~aal~R~ESR--G~h~R~D~P~~ 617 (647)
++|+++ +|++|+++|++|++++.++ ...+.+++++++|++|||++|+++++|||+||||| |+|||+|||++
T Consensus 554 ~~v~R~~~~~L~~al~~l~~l~~~~~~~----~~~~~~~l~~~~E~~~~l~~a~~~~~~al~R~ESR~~G~H~R~D~P~~ 629 (662)
T 3gyx_A 554 GTYYNTSKALLDTGFWLMEMLEEDSLKL----AARDLHELLRCWENYHRLWTVRLHMQHIAFREESRYPGFYYRADFLGL 629 (662)
T ss_dssp TTTTEECHHHHHHHHHHHHHHHHHGGGB----CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCSSTTTCEETTSCSC
T ss_pred ccEEEcCHHHHHHHHHHHHHHHHHHhcC----cCCChHHHHHHHHHHhHHHHHHHHHHHHHhCcccccccceecccCCcc
Confidence 999997 9999999999999887653 23456789999999999999999999999999999 99999999999
Q ss_pred ccCCCCCeeec---CCCccccccccccccC
Q 006387 618 EENKRLPTIIL---PSLVNCTWSSRQLHKL 644 (647)
Q Consensus 618 d~~~~~~~~~~---~~~~~~~~~~~~~~~~ 644 (647)
||++|+++++. ++..+.++.+.|+..+
T Consensus 630 dd~~w~~~~~~~~~~~~g~~~~~~~p~~~~ 659 (662)
T 3gyx_A 630 DDSKWKCFVNSKYDPAKKETKIFKKPYYQI 659 (662)
T ss_dssp CTTTCCSEEEEEEETTTTEEEEEEECCEEC
T ss_pred CccccceEEEEEEcCCCCceEEEEeehhcc
Confidence 99888887764 2346677777777654
No 7
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=100.00 E-value=3e-77 Score=654.97 Aligned_cols=467 Identities=36% Similarity=0.527 Sum_probs=404.2
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHHHHHH
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVCT 168 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~ 168 (647)
||||||||+||++||+.|++.| +|+||||. ..+|++.+++||+....++.++++.++.++++.+.++++++.++.+++
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~ 79 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS 79 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHH
Confidence 8999999999999999999999 99999999 778889999999998888889999999999999999999999999999
Q ss_pred HhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCC
Q 006387 169 EGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGP 248 (647)
Q Consensus 169 ~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~ 248 (647)
++++.++++.++|++|+.. +..+++++++|.++..+.++..+...|.+.+++ .|+++++++.| +|+.+ ++
T Consensus 80 ~~~~~i~~l~~~Gv~~~~~------~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~-~gv~i~~~~~v-~l~~~-~~- 149 (472)
T 2e5v_A 80 EAKNVIETFESWGFEFEED------LRLEGGHTKRRVLHRTDETGREIFNFLLKLARE-EGIPIIEDRLV-EIRVK-DG- 149 (472)
T ss_dssp HHHHHHHHHHHTTCCCCSS------CBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHH-TTCCEECCCEE-EEEEE-TT-
T ss_pred HHHHHHHHHHHcCCCCCcc------cccccCcCcCcEEEeCCCCHHHHHHHHHHHHHh-CCCEEEECcEE-EEEEe-CC-
Confidence 9999999999999999753 445678888999888888899999999999965 59999999999 99876 45
Q ss_pred CCeEEEEEEEecCCCeEEEEEcCeEEECCCcccccCCCCCCCCCCcchHHHHHHHcCCeecCccccccccccccCCCCCC
Q 006387 249 DAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPI 328 (647)
Q Consensus 249 ~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~~~~~~~~~~~tGdg~~~a~~aGa~l~~~e~~q~~p~~~~~~g~~~ 328 (647)
+|.|+.+.+ .+| .+.|+.||+|||+++.+|+.++++..++|||+.|++++|+.+.+|||+||||+.+...+.
T Consensus 150 --~v~Gv~v~~-~~g---~~~a~~VVlAtGg~~~~~~~~~~~~~~tGdgi~~a~~aGa~~~d~e~~q~~p~~~~~ggg-- 221 (472)
T 2e5v_A 150 --KVTGFVTEK-RGL---VEDVDKLVLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVTSLDGE-- 221 (472)
T ss_dssp --EEEEEEETT-TEE---ECCCSEEEECCCCCGGGSSSBSSCTTCSCHHHHHHHHTTCCEECTTCEEEEEEEECGGGC--
T ss_pred --EEEEEEEEe-CCC---eEEeeeEEECCCCCcccCccccCCCCCchHHHHHHHHcCCCEeCCcceEEEeEEEccCCC--
Confidence 788987743 233 367999999999999999988899999999999999999999999999999987653221
Q ss_pred CCCCCCCccceeeecccCCCceEEeCCCCccccccccccccCchhHHHHHHHHHHHhcCCCeEEEecCCCChhHHHhhCh
Q 006387 329 KPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDDQLKKRNEKYVLLDISHKPTEKILSHFP 408 (647)
Q Consensus 329 ~p~~~~~~~~l~~e~~~~~g~~~vn~~G~rf~~~~~~~~~l~~rd~~~~~i~~~~~~~~~~~v~ld~~~~~~~~l~~~~~ 408 (647)
.+++++++++.|++++|.+|+|||++|++..++.|||++++++.+++.+++ .+|+|.++++. +.+++|
T Consensus 222 --------~~~~ae~~~~~G~~~v~~~g~rf~~~~~~~~el~~rd~v~~~i~~~~~~~~--~v~ld~~~~~~--~~~~~~ 289 (472)
T 2e5v_A 222 --------VFLLTETLRGEGAQIINENGERFLFNYDKRGELAPRDILSRAIYIEMLKGH--KVFIDLSKIED--FERKFP 289 (472)
T ss_dssp --------CEECCTHHHHTTCEEEETTCCCGGGGTCTTGGGSCHHHHHHHHHHHHHHTC--CEEEECTTCTT--HHHHCH
T ss_pred --------ceeeehhhcCCceEEECCCCCCCCccCCcccCcCchhHHHHHHHHHHHhCC--cEEEeccchHH--HHHHhH
Confidence 456788899999999999999999999998899999999999999987754 49999987653 667899
Q ss_pred hHHHHHHHcCCCCCCCCeeeeeeeceecCceEECCCCCcccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHH
Q 006387 409 NIAAECLKYGLDITSQPIPVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPS 488 (647)
Q Consensus 409 ~~~~~~~~~G~d~~~~~i~v~p~~~~~~GGi~vD~~~~T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a 488 (647)
+++..+...|+||. +++++.|..|+++|||+||+++||+||||||||||+|+|+||+||++|+++.+|++||++||+++
T Consensus 290 ~~~~~~~~~G~dp~-~~i~v~p~~~~~~GGI~vd~~~~t~ipgLyAaGd~a~~~~hg~~rl~~~sl~~~~v~G~~a~~~~ 368 (472)
T 2e5v_A 290 VVAKYLARHGHNYK-VKIPIFPAAHFVDGGIRVNIRGESNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINLPRYV 368 (472)
T ss_dssp HHHHHHHHTTCCTT-SCEECEEEEEEESCEEECCTTCBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHGGGTT
T ss_pred HHHHHHHHhCcCcc-cceEeehhhceeCCCeEECCCCccccCCEEecchhcccccCCCCCCCcccHHHHHHHHHHHHHHH
Confidence 98899999999999 99999999999999999999999999999999999966999999999999999999999999988
Q ss_pred HHhhhcccccccccccccccccCcccccccchhhhhcHHHHHHHHHHHHHhcCccccCHHHHHHHHHHHHHHHHHHHHhh
Q 006387 489 IDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYL 568 (647)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m~~~~g~~r~~~~l~~al~~l~~l~~~~~~~~ 568 (647)
+++.... . .....+.. . .....+.+++.+||++||+|+||+|++++|++++++|++|++
T Consensus 369 a~~~~~~-~--~~~~~~~~-----~-------~~~~~~~~~~~~l~~~m~~~~g~~r~~~~l~~~~~~~~~~~~------ 427 (472)
T 2e5v_A 369 DSSWEGI-S--TDDGIVHS-----V-------RISGNKTLSLKEIRRINWENVGIIRNEEKLVKAINTYSSSTQ------ 427 (472)
T ss_dssp TSCCCCC-C--CTTEEEEE-----E-------CCCCCCCCCHHHHHHHHHHHSSSSBCHHHHHHHHHHHTTCCC------
T ss_pred Hhhcccc-h--hhhhhccc-----c-------cccCChHHHHHHHHHHHHHhcCcccCHHHHHHHHHHHHHHHH------
Confidence 7653210 0 00000000 0 001234456789999999999999999999999999977521
Q ss_pred hccCcccccchHHHHHHHhHHHHHHHHHHHHHhcCcCcccccccCCCCCccCCCCCeee
Q 006387 569 FEHGWEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFPHVEENKRLPTII 627 (647)
Q Consensus 569 ~~~~~~~~~~~~~~~e~~~~l~~a~~~~~aal~R~ESRG~h~R~D~P~~d~~~~~~~~~ 627 (647)
+|+++|+++++|||+|+||||+|||+|||++||+|++++++
T Consensus 428 ------------------~~~~~a~~~~~~al~R~esrG~h~r~d~p~~~~~~~~~~~~ 468 (472)
T 2e5v_A 428 ------------------NEAIISYLTALAAEIRKESRGNHFREDYPYKDPNWEKRIYF 468 (472)
T ss_dssp ------------------HHHHHHHHHHHHHHHCCSCBTTBCBTTBCSCCGGGCSEEEE
T ss_pred ------------------HHHHHHHHHHHHHHhccccccceecccCCCcChhhhceEEE
Confidence 38999999999999999999999999999999986655443
No 8
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=100.00 E-value=3.6e-72 Score=636.07 Aligned_cols=525 Identities=20% Similarity=0.225 Sum_probs=389.0
Q ss_pred ccccCEEEECcchHHHHHHHHHH---h-cC-CeEEEEecCCCCCCccccCCCeeee--cCC------CCCHHHHHHHHHH
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVA---K-HG-TVAVITKAEPHESNTNYAQGGVSAV--LCP------SDSVESHMQDTIV 152 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa---~-~G-~V~llEk~~~~~G~t~~a~Ggi~~~--~~~------~d~~~~~~~~~~~ 152 (647)
..++||||||||+|||+||+.|+ + .| +|+||||....++ +.+++|+.... .++ .|+++.++.+++.
T Consensus 20 ~~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~~s-~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~ 98 (643)
T 1jnr_A 20 VVETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERS-GAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVTL 98 (643)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTC-STTTTCEEEESCCCCSSSSBSCCCCHHHHHHHHHH
T ss_pred eccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCCCC-cceecccccccchhhHHHhcCCCCCHHHHHHHHHH
Confidence 45799999999999999999999 6 89 9999999987543 44565554322 222 5889999999999
Q ss_pred hcccCCCHHHHHHHHHHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCc-E
Q 006387 153 AGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNI-S 231 (647)
Q Consensus 153 ~g~~~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv-~ 231 (647)
.+.+++++++++.+++++++.++||.++|++|....+|.+.. .+.... ...|..+...|.+.+++.+|| +
T Consensus 99 ~g~~l~d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~--~~~~~~-------~~~g~~~~~~l~~~~~~~~gv~~ 169 (643)
T 1jnr_A 99 DMMGLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYVR--EGQWQI-------MIHGESYKPIIAEAAKMAVGEEN 169 (643)
T ss_dssp HTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCBCBCTTSCBCB--SSSSCE-------EEEETTHHHHHHHHHHHHHCGGG
T ss_pred HhcCcCcHHHHHHHHHHHHHHHHHHHHcCCcceeCCCCCccC--CCcccc-------CCCcHHHHHHHHHHHHhcCCCcE
Confidence 999999999999999999999999999999998776665432 111100 012345667777777653389 9
Q ss_pred EEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccccCCCCC---------CCCCCcchHHHHHH
Q 006387 232 VFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTT---------NPLVATGDGMAMAH 302 (647)
Q Consensus 232 i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~~~~~~---------~~~~~tGdg~~~a~ 302 (647)
|++++.|++|+.++++ .++|.||.+.+..+|+...|+|+.||+||||++.+|..++ +++.+||||+.||+
T Consensus 170 i~~~~~v~~L~~~~~~-~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~y~~~~~~~~~~~~~~~~~~tGdG~~mA~ 248 (643)
T 1jnr_A 170 IYERVFIFELLKDNND-PNAVAGAVGFSVREPKFYVFKAKAVILATGGATLLFRPRSTGEAAGRTWYAIFDTGSGYYMGL 248 (643)
T ss_dssp EECSEEEEEEEECTTC-TTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSSSCCSCCSGGGGCCSSCTTCBSHHHHHHH
T ss_pred EEecCEEEEEEEcCCc-cceeEEEEEEEecCCcEEEEEcCEEEECCCcccccccCcccccccccccCCCCCccHHHHHHH
Confidence 9999999999986440 0179999988777788778999999999999999885433 47889999999999
Q ss_pred HcCCeecCccccccccccccCCCCCCCCCCCCCccceeeecccCCCceEEeCCCCccccccccccc-cC--------chh
Q 006387 303 RAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAE-LA--------PRD 373 (647)
Q Consensus 303 ~aGa~l~~~e~~q~~p~~~~~~g~~~~p~~~~~~~~l~~e~~~~~g~~~vn~~G~rf~~~~~~~~~-l~--------~rd 373 (647)
++||.+.+||+ ||||+.+..... |. ...+ ...|++++|.+|+|||++|++..+ ++ ++|
T Consensus 249 ~aGa~l~~me~-qf~pt~~~~~~~---~~---~~~~------l~~g~ilvn~~G~RF~~e~~~~~~~~~~~~~~~~~~rd 315 (643)
T 1jnr_A 249 KAGAMLTQFEH-RFIPFRFKDGYG---PV---GAWF------LFFKCKAKNAYGEEYIKTRAAELEKYKPYGAAQPIPTP 315 (643)
T ss_dssp HHTCCEESTTC-CBCCEEETTTCC---CC---HHHH------HTSCCCEECTTSCCHHHHTSGGGGGGTTGGGSSSCCHH
T ss_pred HhCCccCCchh-eeecccccCCCC---Cc---ccce------ecccceEECCCCCchhhccchhhhhHhhhcccCCCCch
Confidence 99999999997 999998764211 11 0012 234789999999999999887643 33 588
Q ss_pred HHHHHHHHHHHhcCCCeEEEecCC---------------CChhH---HHhhChhHHHHHHHcCCCCCCCCeeeeeeecee
Q 006387 374 VVARSIDDQLKKRNEKYVLLDISH---------------KPTEK---ILSHFPNIAAECLKYGLDITSQPIPVVPAAHYM 435 (647)
Q Consensus 374 ~~~~~i~~~~~~~~~~~v~ld~~~---------------~~~~~---l~~~~~~~~~~~~~~G~d~~~~~i~v~p~~~~~ 435 (647)
+++++|..++.+++ +++|+|..+ ++.+. ....++..+..+.+.|+|+.++|+||.|.+||+
T Consensus 316 ~~~~~i~~e~~~g~-g~~~l~~~~~~~ela~~~gld~~~l~~~~~~~~l~~~~~~~~~~~~~G~D~~~~~ipv~p~~hy~ 394 (643)
T 1jnr_A 316 LRNHQVMLEIMDGN-QPIYMHTEEALAELAGGDKKKLKHIYEEAFEDFLDMTVSQALLWACQNIDPQEQPSEAAPAEPYI 394 (643)
T ss_dssp HHHHHHHHHHHTTC-CCEEECHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCCTTTSCEEEEECCCBB
T ss_pred hhHHHHHHHHhcCC-CCceeeecccHHHHHHHhccChhhhhHHHHHHHHHHhHHHHHHHHhcCCCcccCcccccCCCCcc
Confidence 99999999998765 568987542 12111 134556777777889999999999999999999
Q ss_pred cC------ceEEC-----------------CCCCcccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhh
Q 006387 436 CG------GVRAG-----------------LQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHK 492 (647)
Q Consensus 436 ~G------Gi~vD-----------------~~~~T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~ 492 (647)
|| ||+|| .+++|+|||||||||++|+++ ||++||||++ |++||++|++++
T Consensus 395 ~G~~~t~gGi~~d~~~~vl~~~~~~~v~~~~~~~t~I~GLyAaGe~a~~~~---~r~~~~sl~~----G~~ag~~aa~~~ 467 (643)
T 1jnr_A 395 MGSHSGEAGFWVCGPEDLMPEEYAKLFPLKYNRMTTVKGLFAIGDCAGANP---HKFSSGSFTE----GRIAAKAAVRFI 467 (643)
T ss_dssp CSSSSCCCEECCCCCTTTCCHHHHTTCSSCCTTBCSSBTEEECGGGBCSCC---CCHHHHHHHH----HHHHHHHHHHHH
T ss_pred ccccccccceeecCccccccccccccccccccCCceeCCEEeeeccccccc---cccchhHHHH----HHHHHHHHHHHH
Confidence 99 89998 455799999999999996543 6888887766 555555555555
Q ss_pred hccc--cccc--ccccc-cccccCcc--------cccccchhhhhcHHHHHHHHHHHHHhcCc----cccCHH-HHHHHH
Q 006387 493 KSTS--IDLS--ASNWW-TRTVVPKS--------LGCNVMHNILRRTKEVRKELQSIMWRYVG----IVRSTT-SLQTAE 554 (647)
Q Consensus 493 ~~~~--~~~~--~~~~~-~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~m~~~~g----~~r~~~-~l~~al 554 (647)
+... ..+. +.... .....+.. ............+.+++.+||++||+|+| ++|+++ +|++|+
T Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~M~~~~g~i~~~~R~~~~~L~~al 547 (643)
T 1jnr_A 468 LEQKPNPEIDDAVVEELKKKAYAPMERFMQYKDLSTADDVNPEYILPWQGLVRLQKIMDEYAAGIATIYKTNEKMLQRAL 547 (643)
T ss_dssp HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHGGGCSSTTCCTTCBCHHHHHHHHHHHHHHHTTCGGGTTEECHHHHHHHH
T ss_pred hccCCCCCCCHHHHHHHHHHHHhHHHHhhhccccccccccCcCCCCHHHHHHHHHHHHHHHhCCCcceeecCHHHHHHHH
Confidence 3211 0000 00000 00000000 00000001123578899999999999999 568755 999999
Q ss_pred HHHHHHHHHHHHhhhccCcccccchHHHHHHHhHHHHHHHHHHHHHhcCcCc--ccccccCCCCCccCCCCCeeec-C--
Q 006387 555 WRIDELEAEWETYLFEHGWEQTFVGLEACEMRNLFCCAKLVVSSALARHESR--GLHYMVDFPHVEENKRLPTIIL-P-- 629 (647)
Q Consensus 555 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~a~~~~~aal~R~ESR--G~h~R~D~P~~d~~~~~~~~~~-~-- 629 (647)
++|++|++++..+ ...+.+++++++|++||+++|++|++|||+|+||| |+|||+|||++||++|+++++. .
T Consensus 548 ~~l~~l~~~~~~~----~~~~~~~l~~~~e~~n~l~~a~~i~~aAl~R~ESR~~G~H~R~D~P~~d~~~~~~~~~~~~~~ 623 (643)
T 1jnr_A 548 ELLAFLKEDLEKL----AARDLHELMRAWELVHRVWTAEAHVRHMLFRKETRWPGYYYRTDYPELNDEEWKCFVCSKYDA 623 (643)
T ss_dssp HHHHHHHHHHTTB----CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCSSTTTCEETTSCSCCTTTCCEEEEEEEET
T ss_pred HHHHHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCceecccCCccChHHHHHHHhhhccc
Confidence 9999998876432 22345778999999999999999999999999999 9999999999999978776653 2
Q ss_pred CCccccccccccccCCC
Q 006387 630 SLVNCTWSSRQLHKLPV 646 (647)
Q Consensus 630 ~~~~~~~~~~~~~~~~~ 646 (647)
+..+......|+..+|.
T Consensus 624 ~~~~~~~~~~pv~~~~~ 640 (643)
T 1jnr_A 624 EKDEWTFEKVPYVQVIE 640 (643)
T ss_dssp TTTEEEEEEEECCCCBC
T ss_pred CCCceEEEEeecccCCc
Confidence 34555666677777664
No 9
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=100.00 E-value=5.6e-52 Score=466.29 Aligned_cols=376 Identities=30% Similarity=0.438 Sum_probs=305.2
Q ss_pred CccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecC-------CCCCHHHHHHHHHHhccc
Q 006387 85 SVKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLC-------PSDSVESHMQDTIVAGAY 156 (647)
Q Consensus 85 ~~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~-------~~d~~~~~~~~~~~~g~~ 156 (647)
...++||||||||+||++||+.|+++| +|+||||.+..+|++.+++|+++.... ..++++.++.++++.+.+
T Consensus 123 ~~~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~ 202 (571)
T 1y0p_A 123 PHDTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQN 202 (571)
T ss_dssp CSEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCC
Confidence 345799999999999999999999999 999999999999999999888875432 368899999999999999
Q ss_pred CCCHHHHHHHHHHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccC--CchHHHHHHHHHHHHcCCCcEEEc
Q 006387 157 LCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAAD--MTGREIERALLEAVVSDPNISVFE 234 (647)
Q Consensus 157 ~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~--~~g~~~~~~L~~~~~~~~gv~i~~ 234 (647)
..++++++.+.+.+.+.++||.++|++|.. +...+++.++|..++.+ ..+..+...|.+.+++. ||+|++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~-------~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~-gv~i~~ 274 (571)
T 1y0p_A 203 INDPALVKVLSSHSKDSVDWMTAMGADLTD-------VGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKR-NIDLRM 274 (571)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTTCCCCE-------EECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHT-TCEEES
T ss_pred CCCHHHHHHHHHccHHHHHHHHhcCCCCcc-------CcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhc-CCEEEe
Confidence 999999999999999999999999999853 23446677777776654 56888999999999884 999999
Q ss_pred ceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccccc------CC------CCCCCCCCcchHHHHHH
Q 006387 235 HHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHI------YP------STTNPLVATGDGMAMAH 302 (647)
Q Consensus 235 ~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~------~~------~~~~~~~~tGdg~~~a~ 302 (647)
+++|++|+.++++ +|.||.+.+ .+|+..+|+|+.||+|||+++.. |. .+++++.+||||+.||+
T Consensus 275 ~~~v~~l~~~~~g---~v~Gv~~~~-~~g~~~~i~a~~VVlAtGg~~~n~~~~~~~~p~~~~~~~~~~~~~tGdg~~~a~ 350 (571)
T 1y0p_A 275 NTRGIEVLKDDKG---TVKGILVKG-MYKGYYWVKADAVILATGGFAKNNERVAKLDPSLKGFISTNQPGAVGDGLDVAE 350 (571)
T ss_dssp SEEEEEEEECTTS---CEEEEEEEE-TTTEEEEEECSEEEECCCCCTTCHHHHHHHCGGGTTCCBCSCTTCSSHHHHHHH
T ss_pred CCEeeEeEEcCCC---eEEEEEEEe-CCCcEEEEECCeEEEeCCCcccCHHHHHHhCccccCCcccCCCCCchHHHHHHH
Confidence 9999999987436 799998875 36777789999999999999862 21 46678889999999999
Q ss_pred HcCCeecCccccccccccccCCCCCCCCCCCCCccceeeecccCCCceEEeCCCCccccccccccccCchhHHHHHHHHH
Q 006387 303 RAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDDQ 382 (647)
Q Consensus 303 ~aGa~l~~~e~~q~~p~~~~~~g~~~~p~~~~~~~~l~~e~~~~~g~~~vn~~G~rf~~~~~~~~~l~~rd~~~~~i~~~ 382 (647)
++|+.+.+|||+|+||+.+...+ .+.++.++++|+++||.+|+||++ |+.+|+++++++..+
T Consensus 351 ~~Ga~~~~~~~~~~~p~~~~~~~------------~~~~~~~~~~g~i~vn~~G~RF~~------E~~~~~~~~~a~~~~ 412 (571)
T 1y0p_A 351 NAGGALKDMQYIQAHPTLSVKGG------------VMVTEAVRGNGAILVNREGKRFVN------EITTRDKASAAILAQ 412 (571)
T ss_dssp HTTCCEECTTCEEEEEEEETTTC------------SBCCTHHHHTTCEEECTTSCCCSC------TTSCHHHHHHHHHTS
T ss_pred HcCCcEeCCcceeecCcccCCCC------------ceeeecccCCceEEECCCCCCCcC------CCCcHhHHHHHHHhC
Confidence 99999999999999999875322 234567788899999999999997 567899999988765
Q ss_pred HHhcCCCeEEEecCCCC----hhHHH-----hhChhHHHHHHHcCC--------------------CC-----------C
Q 006387 383 LKKRNEKYVLLDISHKP----TEKIL-----SHFPNIAAECLKYGL--------------------DI-----------T 422 (647)
Q Consensus 383 ~~~~~~~~v~ld~~~~~----~~~l~-----~~~~~~~~~~~~~G~--------------------d~-----------~ 422 (647)
.. +..++++|..... .+... .+.+++.+++++.|+ |+ .
T Consensus 413 ~~--~~~~~i~d~~~~~~~~~~~~~~~~g~~~~~~tl~ela~~~gi~~~~l~~tv~~yn~~~~~g~D~~f~k~~~~~~i~ 490 (571)
T 1y0p_A 413 TG--KSAYLIFDDSVRKSLSKIDKYIGLGVAPTADSLVKLGKMEGIDGKALTETVARYNSLVSSGKDTDFERPNLPRALN 490 (571)
T ss_dssp GG--GCEEEEEEHHHHHHCTTHHHHHHHTCCCEESSHHHHHHHHTSCHHHHHHHHHHHHHHHHHTCCTTTCCSCCCCCSC
T ss_pred cC--CCEEEEEChHHHhhhhhHHHHhhCCeEEEeCCHHHHHHHhCcCHHHHHHHHHHHHHHHHcCCCcccCCCCCCCcCC
Confidence 32 2234555543111 01110 123455555544444 32 2
Q ss_pred CCC---eeeeeeeceecCceEECCCCC------cccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhh
Q 006387 423 SQP---IPVVPAAHYMCGGVRAGLQGE------TNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKK 493 (647)
Q Consensus 423 ~~~---i~v~p~~~~~~GGi~vD~~~~------T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~ 493 (647)
+.| +++.|..|+++|||+||+++| |+|||||||||++ +|+||+||++|++|++|+|||++||++|+++++
T Consensus 491 ~~Pfya~~~~p~~~~t~GGl~id~~~~vl~~~g~~I~GLyAaGe~~-~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~~~~ 569 (571)
T 1y0p_A 491 EGNYYAIEVTPGVHHTMGGVMIDTKAEVMNAKKQVIPGLYGAGEVT-GGVHGANRLGGNAISDIITFGRLAGEEAAKYSK 569 (571)
T ss_dssp SSCEEEEEEEEEEEEECCEEEBCTTCEEECTTSCEEEEEEECSTTE-ESSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCEEEEEEeeeeeEecCCeEECCCceEECCCCCCcCCcEeceEcC-CCCcCCCCCchHhHHHHHHHHHHHHHHHHHHhh
Confidence 345 899999999999999999999 8999999999998 799999999999999999999999999988753
No 10
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=100.00 E-value=2.3e-51 Score=460.29 Aligned_cols=375 Identities=29% Similarity=0.432 Sum_probs=305.4
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecC-------CCCCHHHHHHHHHHhcccC
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLC-------PSDSVESHMQDTIVAGAYL 157 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~-------~~d~~~~~~~~~~~~g~~~ 157 (647)
...+||+|||+|+||++||+.|++.| +|+|+||.+..+|++.+++|+++.... ..++++.++.++++.+.+.
T Consensus 124 ~~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~ 203 (572)
T 1d4d_A 124 KETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNI 203 (572)
T ss_dssp CEECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 45789999999999999999999999 999999999999999999998876543 3578899999999999999
Q ss_pred CCHHHHHHHHHHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccC--CchHHHHHHHHHHHHcCCCcEEEcc
Q 006387 158 CDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAAD--MTGREIERALLEAVVSDPNISVFEH 235 (647)
Q Consensus 158 ~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~--~~g~~~~~~L~~~~~~~~gv~i~~~ 235 (647)
+++++++.+++.+.+.++||.++|++|.. +...+++..+|..+..+ .++..+...|.+.+++. ||+|+++
T Consensus 204 ~~~~~v~~~~~~~~~~i~~l~~~Gv~~~~-------~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~-gv~i~~~ 275 (572)
T 1d4d_A 204 NDPELVKVLANNSSDSIDWLTSMGADMTD-------VGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKR-GTDIRLN 275 (572)
T ss_dssp SCHHHHHHHHHTHHHHHHHHHHHTCCCCE-------EECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHT-TCEEESS
T ss_pred CCHHHHHHHHHccHHHHHHHHhcCCcccc-------ccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHc-CCeEEec
Confidence 99999999999999999999999999853 22456777788776554 35888999999999885 9999999
Q ss_pred eEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccccc------C------CCCCCCCCCcchHHHHHHH
Q 006387 236 HFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHI------Y------PSTTNPLVATGDGMAMAHR 303 (647)
Q Consensus 236 ~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~------~------~~~~~~~~~tGdg~~~a~~ 303 (647)
++|++|+.++++ +|.||.+.+ .+|+..+|+||.|||||||++.. | ..+++++.++|||+.||++
T Consensus 276 t~v~~l~~~~~g---~v~GV~~~~-~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~p~~~~~~~~~~~~~tGdgi~~a~~ 351 (572)
T 1d4d_A 276 SRVVRILEDASG---KVTGVLVKG-EYTGYYVIKADAVVIAAGGFAKNNERVSKYDPKLKGFKATNHPGATGDGLDVALQ 351 (572)
T ss_dssp EEEEEEEEC--C---CEEEEEEEE-TTTEEEEEECSEEEECCCCCTTCHHHHHHHCGGGTTCCBSSCTTCSSHHHHHHHH
T ss_pred CEEEEEEECCCC---eEEEEEEEe-CCCcEEEEEcCEEEEeCCCCccCHHHHHHhCccccCCCccCCCCCccHHHHHHHH
Confidence 999999987426 799998875 46777789999999999999863 2 1366788999999999999
Q ss_pred cCCeecCccccccccccccCCCCCCCCCCCCCccceeeecccCCCceEEeCCCCccccccccccccCchhHHHHHHHHHH
Q 006387 304 AQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDDQL 383 (647)
Q Consensus 304 aGa~l~~~e~~q~~p~~~~~~g~~~~p~~~~~~~~l~~e~~~~~g~~~vn~~G~rf~~~~~~~~~l~~rd~~~~~i~~~~ 383 (647)
+|+.+.+|+|+|+||+..... .+++++.++++|+++||.+|+||++ |+.+|+.+++++..+.
T Consensus 352 ~Ga~~~~~~~~q~~p~~~~~~------------~~l~~~~~~~~g~i~vn~~G~RF~~------E~~~~~~~~~ai~~~~ 413 (572)
T 1d4d_A 352 AGAATRDLQYIQAHPTYSPAG------------GVMITEAVRGNGAIVVNREGNRFMN------EITTRDKASAAILQQK 413 (572)
T ss_dssp TTBCEECTTCEEEEEEEETTT------------TEECCHHHHHTTCEEECTTSCCCSC------TTSCHHHHHHHHHTSG
T ss_pred cCCeEeCCCceeEecccCCCc------------cccchhhhccCceEEECCCCCCccC------CCCCHhHHHHHHHhCc
Confidence 999999999999999864211 4667788899999999999999997 4578999999887642
Q ss_pred HhcCCCeEEEecCCCC----hhH-H----HhhChhHHHHHHHcCCC--------------------C-----------CC
Q 006387 384 KKRNEKYVLLDISHKP----TEK-I----LSHFPNIAAECLKYGLD--------------------I-----------TS 423 (647)
Q Consensus 384 ~~~~~~~v~ld~~~~~----~~~-l----~~~~~~~~~~~~~~G~d--------------------~-----------~~ 423 (647)
++..++.+|..... .+. + ..+++++.+++++.|+| + .+
T Consensus 414 --~~~~~~i~d~~~~~~~~~~~~~~~~~~~~~~~ti~ela~~~gi~~~~l~~tv~~yn~~~~~g~D~~fg~~~~~~~i~~ 491 (572)
T 1d4d_A 414 --GESAYLVFDDSIRKSLKAIEGYVHLNIVKEGKTIEELAKQIDVPAAELAKTVTAYNGFVKSGKDAQFERPDLPRELVV 491 (572)
T ss_dssp --GGCEEEEECHHHHTTCTHHHHHHHTTCCEEESSHHHHHHHHTCCHHHHHHHHHHHHHHC-CCCCTTTCCSCCCCCCCS
T ss_pred --CCeEEEEEChHHhhhccchHHHhhCCcEEEeCCHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCCcccCCCCCCCcCCC
Confidence 22233444532111 000 1 12345566665555544 2 23
Q ss_pred CC---eeeeeeeceecCceEECCCCC-------cccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhh
Q 006387 424 QP---IPVVPAAHYMCGGVRAGLQGE-------TNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKK 493 (647)
Q Consensus 424 ~~---i~v~p~~~~~~GGi~vD~~~~-------T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~ 493 (647)
.| +++.|..|++||||+||+++| |+|||||||||++ +|+||+||++|++|++|+|||++||++|+++++
T Consensus 492 ~Pfya~~v~p~~~~t~GGl~id~~~~Vl~~~g~~~I~GLyAaGe~~-~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa~~~~ 570 (572)
T 1d4d_A 492 APFYALEIAPAVHHTMGGLVIDTKAEVKSEKTAKPITGLYAAGEVT-GGVHGANRLGGNAISDIVTYGRIAGASAAKFAK 570 (572)
T ss_dssp SSEEEEEEEEEEEEECCEEEBCTTCEEEBSSSSSEEEEEEECSTTE-ESTTTTSCCTTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEEEEcccceeCCCeEECCCCeEEcCCCCcccCCeeECeecc-cCCCCCCCCchHhHHHHHHHHHHHHHHHHHHhh
Confidence 46 899999999999999999997 8999999999998 799999999999999999999999999988753
No 11
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=100.00 E-value=8.8e-51 Score=455.85 Aligned_cols=376 Identities=29% Similarity=0.420 Sum_probs=303.4
Q ss_pred CccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeec-------CCCCCHHHHHHHHHHhccc
Q 006387 85 SVKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL-------CPSDSVESHMQDTIVAGAY 156 (647)
Q Consensus 85 ~~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~-------~~~d~~~~~~~~~~~~g~~ 156 (647)
...++||||||||+||++||+.|++.| +|+||||....+|++.+++|+++... +..++++.++.++++.+.+
T Consensus 118 ~~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~ 197 (566)
T 1qo8_A 118 PSETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQ 197 (566)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCC
Confidence 456799999999999999999999999 99999999999999999999887543 2468899999999999999
Q ss_pred CCCHHHHHHHHHHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccC--CchHHHHHHHHHHHHcCCCcEEEc
Q 006387 157 LCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAAD--MTGREIERALLEAVVSDPNISVFE 234 (647)
Q Consensus 157 ~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~--~~g~~~~~~L~~~~~~~~gv~i~~ 234 (647)
..++.+++.+.+.+.+.++||.++|++|.. +...+++.++|..++.+ .++..+...|.+.+++. ||+|++
T Consensus 198 ~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~-------~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~-gv~i~~ 269 (566)
T 1qo8_A 198 QNDIKLVTILAEQSADGVQWLESLGANLDD-------LKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQ-GIDTRL 269 (566)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTTCCCCE-------EECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHT-TCCEEC
T ss_pred CCCHHHHHHHHhccHHHHHHHHhcCCcccc-------ccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhc-CCEEEe
Confidence 999999999999999999999999999853 22346667777766554 35888999999999884 999999
Q ss_pred ceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccccc------C-C-----CCCCCCCCcchHHHHHH
Q 006387 235 HHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHI------Y-P-----STTNPLVATGDGMAMAH 302 (647)
Q Consensus 235 ~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~------~-~-----~~~~~~~~tGdg~~~a~ 302 (647)
+++|++|+.++++ +|.||.+.+ .+|+...|+||.||+||||++.. | | .+++++.++|||+.||+
T Consensus 270 ~~~v~~l~~~~~g---~v~Gv~~~~-~~g~~~~i~A~~VVlAtGg~s~~~~~~~~~~p~~~~~~~~~~~~~tGdg~~~a~ 345 (566)
T 1qo8_A 270 NSRVVKLVVNDDH---SVVGAVVHG-KHTGYYMIGAKSVVLATGGYGMNKEMIAYYRPTMKDMTSSNNITATGDGVLMAK 345 (566)
T ss_dssp SEEEEEEEECTTS---BEEEEEEEE-TTTEEEEEEEEEEEECCCCCTTCHHHHHHHCGGGTTCEECSCTTCSCHHHHHHH
T ss_pred CCEEEEEEECCCC---cEEEEEEEe-CCCcEEEEEcCEEEEecCCcccCHHHHHHhCccccCCcccCCCCCCcHHHHHHH
Confidence 9999999987426 899998875 46777789999999999999974 2 1 24678889999999999
Q ss_pred HcCCeecCccccccccccccCCCCCCCCCCCCCccceeeecccCCCceEEeCCCCccccccccccccCchhHHHHHHHHH
Q 006387 303 RAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDDQ 382 (647)
Q Consensus 303 ~aGa~l~~~e~~q~~p~~~~~~g~~~~p~~~~~~~~l~~e~~~~~g~~~vn~~G~rf~~~~~~~~~l~~rd~~~~~i~~~ 382 (647)
++|+.+.+|+++|+||+..... .+++++.++++|+++||.+|+||++ |+.+++.+++++..+
T Consensus 346 ~~Ga~~~~~~~~~~~p~~~~~~------------~~~~~~~~~~~g~i~vn~~G~Rf~~------E~~~~~~~~~~~~~~ 407 (566)
T 1qo8_A 346 EIGASMTDIDWVQAHPTVGKDS------------RILISETVRGVGAVMVNKDGNRFIS------ELTTRDKASDAILKQ 407 (566)
T ss_dssp HTTBCEESTTCEEEEEEEESSS------------CSBCCTHHHHTTCEEECTTSCCCSC------TTSCHHHHHHHHHTS
T ss_pred HcCCeEecCcceeecccccCCc------------cccchhhhccCCeEEECCCCCCccC------CCCCHHHHHHHHHhC
Confidence 9999999999999999864221 4566778888999999999999997 457888888888764
Q ss_pred HHhcCCCeEEEecCCCCh-----hHHH----hhChhHHHHHHHc--------------------CCCC-----------C
Q 006387 383 LKKRNEKYVLLDISHKPT-----EKIL----SHFPNIAAECLKY--------------------GLDI-----------T 422 (647)
Q Consensus 383 ~~~~~~~~v~ld~~~~~~-----~~l~----~~~~~~~~~~~~~--------------------G~d~-----------~ 422 (647)
. ++..++.+|...... ..+. .+++++.+++++. |.|+ .
T Consensus 408 ~--~~~~~~i~d~~~~~~~~~~~~~~~~~~~~~~~tl~eLa~~~gi~~~~l~~tv~~yn~~~~~g~d~~fg~~~~~~~i~ 485 (566)
T 1qo8_A 408 P--GQFAWIIFDNQLYKKAKMVRGYDHLEMLYKGDTVEQLAKSTGMKVADLAKTVSDYNGYVASGKDTAFGRADMPLNMT 485 (566)
T ss_dssp G--GGCEEEEEEHHHHHHCHHHHHHHHTTCCEEESSHHHHHHHTTCCHHHHHHHHHHHHHHHHHSCCTTTCCSCCCCCSC
T ss_pred C--CCcEEEEEChHHhhhhhhhHHHhhcCcEEEeCCHHHHHHHhCCCHHHHHHHHHHHHHHHhcCCCcccCCCCCCCcCC
Confidence 2 222344445321100 0000 1223344444333 4442 2
Q ss_pred CCC---eeeeeeeceecCceEECCCCC------cccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhh
Q 006387 423 SQP---IPVVPAAHYMCGGVRAGLQGE------TNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKK 493 (647)
Q Consensus 423 ~~~---i~v~p~~~~~~GGi~vD~~~~------T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~ 493 (647)
+.| +++.|..|+++|||+||+++| |+|||||||||++ +|+||+||++|++|++|+|||++||++|+++++
T Consensus 486 ~~Pfya~~~~p~~~~t~GGl~vd~~~~vl~~~g~~I~GLyAaGe~~-~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~~~~ 564 (566)
T 1qo8_A 486 QSPYYAVKVAPGIHHTMGGVAINTTASVLDLQSKPIDGLFAAGEVT-GGVHGYNRLGGNAIADTVVFGRIAGDNAAKHAL 564 (566)
T ss_dssp SSSEEEEEEEEEEEEECCEECBCTTCEEEBTTSCEEEEEEECSTTB-CSSSTTCCCTTHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEEEecccceecccEEECCCCeEECCCCCEeCCEEeccccc-CCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhh
Confidence 345 899999999999999999998 8999999999998 799999999999999999999999999998764
No 12
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=100.00 E-value=4.8e-48 Score=428.40 Aligned_cols=370 Identities=19% Similarity=0.221 Sum_probs=278.3
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeee--------cCCCCCHHHHHHHHHHhccc
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAV--------LCPSDSVESHMQDTIVAGAY 156 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~--------~~~~d~~~~~~~~~~~~g~~ 156 (647)
+.++||||||+|+|||+||+.|+++| +|+||||....+|+|.+++|++... .+..++++.++.++++.+.+
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~s~~s~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~ 118 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGATALAGGFIYLGGGTPLQKACGFDDSPENMKTFMMAALGP 118 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGSCCCEECCSSCHHHHHTTCCCCHHHHHHHHHHHSCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcchhcCcceecCCCCHHHHHhCCCCCHHHHHHHHHHHhCC
Confidence 56799999999999999999999999 9999999999999998888876532 24578999999999999999
Q ss_pred CCCHHHHHHHHHHhHHHHHHHHHcCCCcccC-----------CCCCccccccCCcc-------ccceee-------ccCC
Q 006387 157 LCDDETVRVVCTEGPDRIRELIAIGASFDRG-----------EDGNLHLAREGGHS-------HHRIVH-------AADM 211 (647)
Q Consensus 157 ~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~-----------~~g~~~~~~~gg~~-------~~r~~~-------~~~~ 211 (647)
.++++.++.+++++++.++||.++|++|... .++.+......++. .+|... ..+.
T Consensus 119 ~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~~g~e~~~~~~~~~~~~~r~~~~~~~~~~~g~~ 198 (510)
T 4at0_A 119 GADEEKITDYCEGSVEHYNWLVDCGVPFKESFWGEPGWEPPFDDGLMYSGGENAAPFNEIAAPAPRGHVPQMDGKRTGEK 198 (510)
T ss_dssp SCCHHHHHHHHHTHHHHHHHHHHTTCCCCSCEECSSSSSCSSSCSEECCSSTTSTTGGGTSCCCCCEECCCCSSCBTTTB
T ss_pred CCCHHHHHHHHHhhHHHHHHHHHcCCeecccccCCcccccCCcccccccCcccccccccccCcccceeeecccccccccC
Confidence 9999999999999999999999999998754 11111111111111 122211 2334
Q ss_pred chH-HHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEc-CeEEECCCcccc-------
Q 006387 212 TGR-EIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFIS-KVTLLASGGAGH------- 282 (647)
Q Consensus 212 ~g~-~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~A-k~VVlAtGg~~~------- 282 (647)
+|. .+...|.+.+++. |++|+++++|++|+.++++ +|+||.+.+ +++..+|+| |.|||||||++.
T Consensus 199 ~g~~~l~~~L~~~~~~~-Gv~i~~~t~v~~L~~~~~g---~v~GV~~~~--~g~~~~i~A~k~VVlAtGG~~~n~~m~~~ 272 (510)
T 4at0_A 199 GGGYMLMKPLVETAEKL-GVRAEYDMRVQTLVTDDTG---RVVGIVAKQ--YGKEVAVRARRGVVLATGSFAYNDKMIEA 272 (510)
T ss_dssp CTTHHHHHHHHHHHHHT-TCEEECSEEEEEEEECTTC---CEEEEEEEE--TTEEEEEEEEEEEEECCCCCTTCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHc-CCEEEecCEeEEEEECCCC---cEEEEEEEE--CCcEEEEEeCCeEEEeCCChhhCHHHHHH
Confidence 565 8899999999885 9999999999999987556 899998875 567778999 599999999984
Q ss_pred ----cCCC-CCCCCCCcchHHHHHHHcCCeecCccccccccccccCCCCCCCCCCCCCccceeeecccCCCceEEeCCCC
Q 006387 283 ----IYPS-TTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGME 357 (647)
Q Consensus 283 ----~~~~-~~~~~~~tGdg~~~a~~aGa~l~~~e~~q~~p~~~~~~g~~~~p~~~~~~~~l~~e~~~~~g~~~vn~~G~ 357 (647)
++.. +.+++.+||||+.||+++||.+.+||++|++|... | ..+ .++++||.+|+
T Consensus 273 ~~p~~~~~~~~~~~~~tGdGi~ma~~~Ga~~~~m~~~~~~p~~~--------~------~~~-------~~~i~vn~~G~ 331 (510)
T 4at0_A 273 HAPRLIGRPGAAIEEHDGRSILMAQALGADLAHMDATEVAFVCD--------P------QLI-------VRGILVNGRGQ 331 (510)
T ss_dssp HCGGGTTCBCCSCTTCCCHHHHHHHTTTBCEECTTCEEEEECSC--------H------HHH-------TTSEEECTTSC
T ss_pred hCccccCCCCCCCCCCCHHHHHHHHHhCcCeecchhhhccCccC--------h------hhc-------cccEEECCCCC
Confidence 3333 45677899999999999999999999999776521 1 111 35799999999
Q ss_pred ccccccccccccCchhHHHHHHHHHHHhcCCCeEEEecCCCChhHH----------HhhC--hhHHHHHHH---------
Q 006387 358 RFMPLYDERAELAPRDVVARSIDDQLKKRNEKYVLLDISHKPTEKI----------LSHF--PNIAAECLK--------- 416 (647)
Q Consensus 358 rf~~~~~~~~~l~~rd~~~~~i~~~~~~~~~~~v~ld~~~~~~~~l----------~~~~--~~~~~~~~~--------- 416 (647)
||+++. .+++.+++++..+. +...++++|.+....... ...+ +++.+++++
T Consensus 332 RF~nE~------~~~~~~~~~~~~~~--~~~~~~i~D~~~~~~~~~~~~~~~~~~~~~~~~adtleeLA~~~g~~~~~l~ 403 (510)
T 4at0_A 332 RYVPED------TYSGRIGQMTLFHQ--DNQAFLIIDEASYEEGAAATTATPFLRVQPKWAAETVEELESDMGLPAGALQ 403 (510)
T ss_dssp BCSCTT------SCHHHHHHCCCCCS--TTCCEEEEEHHHHHHHHHSCCSCGGGCCCCSEEESSHHHHHHHTTCCTTHHH
T ss_pred CCCCCC------ccHHHHHHHHHhCC--CCeEEEEECHHHHHhhhcccccccchhhhhcccCCCHHHHHHHhCcCHHHHH
Confidence 999864 45555555544321 223456667542111000 0000 233344333
Q ss_pred -----------cCCCCC--CC-----C-------eee-eeeeceecCceEECCCCC------cccCceeecccccCCCCC
Q 006387 417 -----------YGLDIT--SQ-----P-------IPV-VPAAHYMCGGVRAGLQGE------TNVRGLYVAGEVACTGLH 464 (647)
Q Consensus 417 -----------~G~d~~--~~-----~-------i~v-~p~~~~~~GGi~vD~~~~------T~ipGLyAaGe~a~~g~~ 464 (647)
.|.|++ ++ | +++ .|..|+++|||+||+++| ++|||||||||++ +|+|
T Consensus 404 ~tv~~yN~~~~~g~D~~fgk~~~~l~pi~~Pfya~~~~~~~~~~t~GGl~~d~~~~Vl~~~g~~I~GLyAaGe~~-gg~~ 482 (510)
T 4at0_A 404 STVEVYNKHAAEGSDPLLHKKSEWVKPIGTPVAALDLRGFTLGFTLGGLRTTVNSEVLHVSGEPIPGLFAAGRCT-SGVC 482 (510)
T ss_dssp HHHHHHHHHHTTTCCTTTCCCGGGCCCCCSSEEEEECTTCEEEEECCEECBCTTCEEEBTTSSEEEEEEECGGGB-CCSC
T ss_pred HHHHHHHHHHhcCCCcccCCCcccccCCCCCEEEEEeecCcccccCcCeeECCCCceECCCCCCcCCeeeceecc-cCCC
Confidence 355543 22 1 234 578899999999999999 8999999999998 6999
Q ss_pred CCCccchhhhHHHHHHHHHHHHHHHHh
Q 006387 465 GANRLASNSLLEALVFARRAVQPSIDH 491 (647)
Q Consensus 465 Ga~rl~g~sl~~a~v~G~~Ag~~a~~~ 491 (647)
|+||++|++|++|+|||++||++|+++
T Consensus 483 g~~y~~G~sl~~~~~fGr~Ag~~aa~~ 509 (510)
T 4at0_A 483 AGGYASGTSLGDGSFYGRRAGISAAKQ 509 (510)
T ss_dssp SSSCCTTHHHHHHHHHHHHHHHHHHCC
T ss_pred cCCCCcHHhHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999998764
No 13
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.97 E-value=1.1e-30 Score=284.34 Aligned_cols=357 Identities=20% Similarity=0.224 Sum_probs=219.1
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHH
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVR 164 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~ 164 (647)
..++||+|||||+||++||+.|++.| +|+||||.+..++.+..++++.+..... ..++.++... ......... .+.
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~-~~~~~~~~~~-~~~~~~~~~-~~~ 100 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNR-LPLDEIVKHI-PGNGRFLYS-AFS 100 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEEC-SCHHHHHHTC-TBTGGGGHH-HHH
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCc-ccHHHHHHHh-ccChHHHHH-HHH
Confidence 34689999999999999999999999 9999999987766555555555443322 2333333221 111111111 111
Q ss_pred HHHHHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEEec
Q 006387 165 VVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTT 244 (647)
Q Consensus 165 ~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~ 244 (647)
.....+.++|+.++|+++.....|. +++.+..+..+...|.+.+++ .||+|+.+++|++|..+
T Consensus 101 --~~~~~~~~~~~~~~G~~~~~~~~g~--------------~~p~~~~~~~l~~~L~~~~~~-~GV~i~~~~~V~~i~~~ 163 (447)
T 2i0z_A 101 --IFNNEDIITFFENLGVKLKEEDHGR--------------MFPVSNKAQSVVDALLTRLKD-LGVKIRTNTPVETIEYE 163 (447)
T ss_dssp --HSCHHHHHHHHHHTTCCEEECGGGE--------------EEETTCCHHHHHHHHHHHHHH-TTCEEECSCCEEEEEEE
T ss_pred --hcCHHHHHHHHHhcCCceEEeeCCE--------------EECCCCCHHHHHHHHHHHHHH-CCCEEEeCcEEEEEEec
Confidence 1133567888999999876433221 122233567888999999988 59999999999999976
Q ss_pred CCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccccCCCCCCCCCCcchHHHHHHHcCCeecCcc--cccccccccc
Q 006387 245 LDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNME--FVQFHPTALA 322 (647)
Q Consensus 245 ~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~~~~~~~~~~~tGdg~~~a~~aGa~l~~~e--~~q~~p~~~~ 322 (647)
++ +|.+|.+ .+|+ .|+|+.||+|||+++. + ...+||||+.++.++|+.+..+. ++++++..-.
T Consensus 164 -~~---~v~~V~~---~~G~--~i~Ad~VVlAtGg~s~--~----~~g~tG~g~~la~~~G~~~~~~~p~~~~~~~~~~~ 228 (447)
T 2i0z_A 164 -NG---QTKAVIL---QTGE--VLETNHVVIAVGGKSV--P----QTGSTGDGYAWAEKAGHTITELFPTEVPILSNEPF 228 (447)
T ss_dssp -TT---EEEEEEE---TTCC--EEECSCEEECCCCSSS--G----GGSCSSHHHHHHHHTTCCEEEEEECSCCEECCCHH
T ss_pred -CC---cEEEEEE---CCCC--EEECCEEEECCCCCcC--C----CCCCCcHHHHHHHHCCCCcccCcceeeeeecCCcc
Confidence 44 6777765 3454 5899999999999883 2 34689999999999999987765 3344322100
Q ss_pred CCCCCCCCCCCCCccceeeecccCCCceEE-eCCCCcccccccc-----ccccCchh-HHHHHHHHHHHhc--CCCeEEE
Q 006387 323 DEGLPIKPKKTRENSFLITEAVRGDGGILY-NLGMERFMPLYDE-----RAELAPRD-VVARSIDDQLKKR--NEKYVLL 393 (647)
Q Consensus 323 ~~g~~~~p~~~~~~~~l~~e~~~~~g~~~v-n~~G~rf~~~~~~-----~~~l~~rd-~~~~~i~~~~~~~--~~~~v~l 393 (647)
.... + .....+. ...+.+ |.+|+||.++..+ ++...|.- ..+..+...+... +...+.+
T Consensus 229 ~~~~---~----~~g~~~~-----~~~~~~~~~~g~r~~~~~ge~~~t~~~~~g~~~l~~s~~~~~~~~~~~~~~~~~~~ 296 (447)
T 2i0z_A 229 IRDR---S----LQGLALR-----DINLSVLNPKGKAIISHKMDMLFTHFGLSGPAALRCSQFVVKALKKFKTNTIQMSI 296 (447)
T ss_dssp HHTT---T----TTTCEEE-----EEEEEECC----CEEEEEEEEEECSSEEESHHHHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred cccc---c----ccCcccC-----CeEEEEEecCCceEecccCCeEEECCcccHHHHHHHHHHHHHHHhcccCCceEEEE
Confidence 0000 0 0011101 122444 5667775542111 11011111 1233332333221 2234677
Q ss_pred ecCC-CChhHHHhh--------------------Chh--HHHHHHHcCCCCCC-----------------CCeeeee---
Q 006387 394 DISH-KPTEKILSH--------------------FPN--IAAECLKYGLDITS-----------------QPIPVVP--- 430 (647)
Q Consensus 394 d~~~-~~~~~l~~~--------------------~~~--~~~~~~~~G~d~~~-----------------~~i~v~p--- 430 (647)
|+.. .+.+++.+. +|. +..+++..|+++.+ ..+++.+
T Consensus 297 d~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 376 (447)
T 2i0z_A 297 DALPEENSEQLFQRMLKQMKEDPKKGIKNVLKGYVPERYFLFLLEKNEIDGSEQAGQVSHEKIRALVKDFKEFTVNVNGT 376 (447)
T ss_dssp ESCTTSCHHHHHHHHHHHHTTSTTSBHHHHTTTSSCHHHHHHHHHHTTCCTTSBGGGSCHHHHHHHHHHHHHEEEEECEE
T ss_pred ECCCCCCHHHHHHHHHHHHHhChhhhHHHhccccChHHHHHHHHHHcCCCcCCchhhCCHHHHHHHHHHhhCCEEEecCC
Confidence 7652 344443111 221 22345557888754 2244433
Q ss_pred ----eeceecCceEECC-CCCc----ccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhh
Q 006387 431 ----AAHYMCGGVRAGL-QGET----NVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKK 493 (647)
Q Consensus 431 ----~~~~~~GGi~vD~-~~~T----~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~ 493 (647)
.+|+|+|||.+|+ +.+| .|||||||||++ ++|| |+||++|.+|++||++||++|+++++
T Consensus 377 ~~~~~a~~T~GGv~~~~i~~~t~~~~~i~GLy~aGEv~--~v~g--~~GG~~l~~a~~~G~~Ag~~aa~~~~ 444 (447)
T 2i0z_A 377 QSIEKAFVTGGGVSVKEINPKEMSSKFTNGLYFCGEVL--DIHG--YTGGYNITSALVTGRIAGTTAGENAK 444 (447)
T ss_dssp CCGGGCSSEEEEECGGGEETTTTEESSSBTEEECGGGB--SCBC--CTTTHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCccEEEEeCCceeeecccccccccCcCCCEEEEEeec--cCcc--CCCcHHHHHHHHHHHHHHHHHHHhhh
Confidence 3899999999988 4443 799999999998 4888 89999999999999999999998764
No 14
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.89 E-value=6.2e-23 Score=219.52 Aligned_cols=189 Identities=18% Similarity=0.211 Sum_probs=123.2
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHHH
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
.++||+|||||++|++||+.|+++| +|+|+||.+..++....+.||.+...+....+..++ ....... ...+..
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~----~~~~~~~-~~~l~~ 77 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYL----SQNPHFV-KSALAR 77 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEE----CSCTTST-HHHHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhc----cCCHHHH-HHHHHh
Confidence 3699999999999999999999999 999999998766555445555543322111111110 0000111 111111
Q ss_pred HHHHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEEecC
Q 006387 166 VCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTL 245 (647)
Q Consensus 166 ~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~ 245 (647)
+ ...+.++++.++|+++.....+.+ ++.+ .+..+...|.+.+++ .||+++.++.|+++..++
T Consensus 78 ~--~~~~~~~~~~~~Gi~~~~~~~g~~--------------~p~~-~~~~l~~~L~~~~~~-~Gv~i~~~~~v~~i~~~~ 139 (401)
T 2gqf_A 78 Y--TNWDFISLVAEQGITYHEKELGQL--------------FCDE-GAEQIVEMLKSECDK-YGAKILLRSEVSQVERIQ 139 (401)
T ss_dssp S--CHHHHHHHHHHTTCCEEECSTTEE--------------EETT-CTHHHHHHHHHHHHH-HTCEEECSCCEEEEEECC
T ss_pred C--CHHHHHHHHHhCCCceEECcCCEE--------------ccCC-CHHHHHHHHHHHHHH-CCCEEEeCCEEEEEEccc
Confidence 1 234567888899998764333321 1222 466788889988887 499999999999998752
Q ss_pred CCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccccCCCCCCCCCCcchHHHHHHHcCCeecCc
Q 006387 246 DGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNM 311 (647)
Q Consensus 246 ~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~~~~~~~~~~~tGdg~~~a~~aGa~l~~~ 311 (647)
++....+ .|. ..++ .++|+.||+|||+.+. +. ..++|+|+.++.++|+.+..+
T Consensus 140 ~g~~~~~-~v~---~~~g---~i~ad~VVlAtG~~s~--p~----~g~~G~g~~la~~~G~~i~~~ 192 (401)
T 2gqf_A 140 NDEKVRF-VLQ---VNST---QWQCKNLIVATGGLSM--PG----LGATPFGYQIAEQFGIPVIPP 192 (401)
T ss_dssp SCSSCCE-EEE---ETTE---EEEESEEEECCCCSSC--GG----GTCCSHHHHHHHHTTCCEEEE
T ss_pred CcCCCeE-EEE---ECCC---EEECCEEEECCCCccC--CC----CCCChHHHHHHHHCCCCcccC
Confidence 1000122 232 2333 5899999999999873 32 358999999999999987654
No 15
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.85 E-value=4.4e-21 Score=205.87 Aligned_cols=187 Identities=19% Similarity=0.259 Sum_probs=125.5
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHH
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVR 164 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~ 164 (647)
+.++||+|||||+||++||+.|++.| +|+|+|+.+..++....++||.+........++.++. ...... .....
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~----~~~~~~-~~~l~ 99 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLS----GNPHFC-KSALA 99 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEE----SSTTTT-HHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhh----cCHHHH-HHHHH
Confidence 45699999999999999999999999 9999999988776665555665544332222111100 000000 11111
Q ss_pred HHHHHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEEec
Q 006387 165 VVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTT 244 (647)
Q Consensus 165 ~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~ 244 (647)
.+ ...+.++++.+.|+++.....|.+. + ......+...|.+.+++. |++++.+++|+++..+
T Consensus 100 ~~--~~~~~~~~~~~~Gi~~~~~~~g~~~--------------~-~~~~~~l~~~L~~~l~~~-Gv~i~~~~~V~~i~~~ 161 (417)
T 3v76_A 100 RY--RPQDFVALVERHGIGWHEKTLGQLF--------------C-DHSAKDIIRMLMAEMKEA-GVQLRLETSIGEVERT 161 (417)
T ss_dssp HS--CHHHHHHHHHHTTCCEEECSTTEEE--------------E-SSCHHHHHHHHHHHHHHH-TCEEECSCCEEEEEEE
T ss_pred hc--CHHHHHHHHHHcCCCcEEeeCCEEe--------------e-CCCHHHHHHHHHHHHHHC-CCEEEECCEEEEEEEe
Confidence 11 1245677888899987755444322 1 234667888999999874 9999999999999876
Q ss_pred CCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccccCCCCCCCCCCcchHHHHHHHcCCeecCcc
Q 006387 245 LDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNME 312 (647)
Q Consensus 245 ~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~~~~~~~~~~~tGdg~~~a~~aGa~l~~~e 312 (647)
++ . +.+. ..+| .++|+.||+|||+++ ++. ..++|+|+.++...|..+..+.
T Consensus 162 -~~---~---~~V~-~~~g---~i~ad~VIlAtG~~S--~p~----~gs~g~g~~la~~~G~~i~~~~ 212 (417)
T 3v76_A 162 -AS---G---FRVT-TSAG---TVDAASLVVASGGKS--IPK----MGATGLAYRIAEQFGLPVVETR 212 (417)
T ss_dssp -TT---E---EEEE-ETTE---EEEESEEEECCCCSS--CGG----GTCCCHHHHHHHHTTCCEEEEE
T ss_pred -CC---E---EEEE-ECCc---EEEeeEEEECCCCcc--CCC----CCCCcHHHHHHHHCCCCEeccc
Confidence 33 2 2222 2344 689999999999987 443 3588999999999999876543
No 16
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.71 E-value=7.9e-17 Score=165.83 Aligned_cols=49 Identities=24% Similarity=0.279 Sum_probs=39.8
Q ss_pred CceEECCCCCcccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhh
Q 006387 437 GGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKK 493 (647)
Q Consensus 437 GGi~vD~~~~T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~ 493 (647)
|.|.||+++||++||+||+|||+..++ ..+..|+-.|++||.++.+|+.
T Consensus 252 G~I~vd~~~~Ts~p~IyA~GDv~~~~~--------~~~~~A~~~G~~AA~~i~~~L~ 300 (304)
T 4fk1_A 252 GTFVIDDFGRTSEKNIYLAGETTTQGP--------SSLIIAASQGNKAAIAINSDIT 300 (304)
T ss_dssp SSSCSSTTCBCSSTTEEECSHHHHTSC--------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEECcCCccCCCCEEEEeccCCCcc--------hHHHHHHHHHHHHHHHHHHHHh
Confidence 779999999999999999999972122 1355677789999999988874
No 17
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.69 E-value=1.3e-17 Score=184.05 Aligned_cols=192 Identities=19% Similarity=0.253 Sum_probs=98.4
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHH
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVR 164 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~ 164 (647)
+.+|||+|||+|+||+.||+.|++.| +|+|||+.......+...-||.|...+ |-|....
T Consensus 40 ~ydYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~G-------------------CIPsK~L 100 (542)
T 4b1b_A 40 TYDYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVG-------------------CVPKKLM 100 (542)
T ss_dssp CSSEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHS-------------------HHHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccc-------------------hHHHHHH
Confidence 45799999999999999999999999 999999876432222222344432211 4454433
Q ss_pred HHHHHhHHHHH-HHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEEe
Q 006387 165 VVCTEGPDRIR-ELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLT 243 (647)
Q Consensus 165 ~~~~~~~~~i~-~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~ 243 (647)
....+..+.++ ....+|+.+... .+ .++.+....+..-..+.......+++ .||+++.+.- .+ .
T Consensus 101 ~~aa~~~~~~~~~~~~~Gi~~~~~---~~--------d~~~~~~~~~~~v~~l~~~~~~~l~~-~~V~~i~G~a--~f-~ 165 (542)
T 4b1b_A 101 HYAGHMGSIFKLDSKAYGWKFDNL---KH--------DWKKLVTTVQSHIRSLNFSYMTGLRS-SKVKYINGLA--KL-K 165 (542)
T ss_dssp HHHHHHHHHHHHTGGGGTEEEEEE---EE--------CHHHHHHHHHHHHHHHHHHHHHHHHH-TTCEEECEEE--EE-E
T ss_pred HHHHHHHHHHHhhhHhcCcccCcc---cc--------cHHHHHHHHHHHHHHHHHHHHHHHHh-CCCEEEeeeE--EE-c
Confidence 33322222222 122355543210 00 00000000000001122223333445 5999998752 22 2
Q ss_pred cCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccccCCCCCC--CCCCcchHHHHHH-------HcCCeecCcccc
Q 006387 244 TLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTN--PLVATGDGMAMAH-------RAQAVISNMEFV 314 (647)
Q Consensus 244 ~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~~~~~~~--~~~~tGdg~~~a~-------~aGa~l~~~e~~ 314 (647)
+ .. .+ -|...+ ..++...|+|+.+|||||+.+...+.... ....|.|.+.... =+|+.++.+||.
T Consensus 166 ~-~~---~v-~V~~~~-~~~~~~~i~a~~iiIATGs~P~~P~~~~~~~~~~~ts~~~l~l~~lP~~lvIIGgG~IGlE~A 239 (542)
T 4b1b_A 166 D-KN---TV-SYYLKG-DLSKEETVTGKYILIATGCRPHIPDDVEGAKELSITSDDIFSLKKDPGKTLVVGASYVALECS 239 (542)
T ss_dssp E-TT---EE-EEEEC---CCCEEEEEEEEEEECCCEEECCCSSSBTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHH
T ss_pred C-CC---cc-eEeecc-cCCceEEEeeeeEEeccCCCCCCCCcccCCCccccCchhhhccccCCceEEEECCCHHHHHHH
Confidence 3 22 23 222221 22445679999999999988765432110 1123344432221 168888888888
Q ss_pred ccc
Q 006387 315 QFH 317 (647)
Q Consensus 315 q~~ 317 (647)
+++
T Consensus 240 ~~~ 242 (542)
T 4b1b_A 240 GFL 242 (542)
T ss_dssp HHH
T ss_pred HHH
Confidence 865
No 18
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.68 E-value=4.6e-15 Score=163.42 Aligned_cols=154 Identities=19% Similarity=0.174 Sum_probs=93.7
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCc------------------cccCCCeeeecCCCCCHHHH
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNT------------------NYAQGGVSAVLCPSDSVESH 146 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t------------------~~a~Ggi~~~~~~~d~~~~~ 146 (647)
...+||+|||||++|++||+.|++.| +|+|||++...++.. ....||........-
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl----- 179 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKL----- 179 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCC-----
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCce-----
Confidence 34589999999999999999999999 999999986431100 000011100000000
Q ss_pred HHHHHHhcccCCCHHHHHHHHHHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHc
Q 006387 147 MQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVS 226 (647)
Q Consensus 147 ~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~ 226 (647)
...+.++. ....+.++++.++|.+.....++.. +.+......+...|.+.+.+
T Consensus 180 -------~~~i~~~~------~~~~~v~~~~~~~G~~~~i~~~~~p--------------~~G~~~~~~l~~~L~~~l~~ 232 (549)
T 3nlc_A 180 -------YSQVKDPN------FYGRKVITEFVEAGAPEEILYVSKP--------------HIGTFKLVTMIEKMRATIIE 232 (549)
T ss_dssp -------CCCSCCTT------CHHHHHHHHHHHTTCCGGGGTBSSC--------------CCCHHHHHHHHHHHHHHHHH
T ss_pred -------EEEecccc------ccHHHHHHHHHHcCCCceEeecccc--------------ccccchHHHHHHHHHHHHHh
Confidence 00000000 0112345566677776543211110 01111235677888888887
Q ss_pred CCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 227 DPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 227 ~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
. |++|++++.|+++..+ ++ ++.+|.+ .+|+ .+.|+.||+|+|..+
T Consensus 233 ~-Gv~I~~~t~V~~I~~~-~~---~v~gV~l---~~G~--~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 233 L-GGEIRFSTRVDDLHME-DG---QITGVTL---SNGE--EIKSRHVVLAVGHSA 277 (549)
T ss_dssp T-TCEEESSCCEEEEEES-SS---BEEEEEE---TTSC--EEECSCEEECCCTTC
T ss_pred c-CCEEEeCCEEEEEEEe-CC---EEEEEEE---CCCC--EEECCEEEECCCCCh
Confidence 4 9999999999999886 44 5777765 3454 589999999999866
No 19
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.66 E-value=2.4e-15 Score=155.20 Aligned_cols=52 Identities=25% Similarity=0.270 Sum_probs=41.4
Q ss_pred ecCceEECCCCCcccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhhc
Q 006387 435 MCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 435 ~~GGi~vD~~~~T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
..|.|.||+++||++||+||+|||+..+. + ....|+-.|++||++|++|++.
T Consensus 256 ~~G~I~vd~~~~Ts~pgIyA~GDv~~~~~----~----~~~~A~~~G~~AA~~i~~~L~~ 307 (312)
T 4gcm_A 256 DVGYIVTKDDMTTSVPGIFAAGDVRDKGL----R----QIVTATGDGSIAAQSAAEYIEH 307 (312)
T ss_dssp TTSCBCCCTTSBCSSTTEEECSTTBSCSC----C----SHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEeeCCCCccCCCCEEEEeecCCCcc----h----HHHHHHHHHHHHHHHHHHHHHh
Confidence 35779999999999999999999972121 1 2356777899999999999853
No 20
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.66 E-value=4.5e-17 Score=180.21 Aligned_cols=157 Identities=15% Similarity=0.176 Sum_probs=91.3
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHH
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVR 164 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~ 164 (647)
+.+|||+|||||+||++||+.|++.| +|+||||.+.....+.+..||.+...+ |.|....
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~G-------------------ciPsk~l 90 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVG-------------------CIPKKLM 90 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHS-------------------HHHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcC-------------------ccchHHH
Confidence 35699999999999999999999999 999999976443333344566543211 4455544
Q ss_pred HHHHHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEEec
Q 006387 165 VVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTT 244 (647)
Q Consensus 165 ~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~ 244 (647)
.........+..+..+|+.+....... +.+.....+.....+...+...+.. .+|+++.+. +..+ +
T Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~~~~~d----------~~~~~~~~~~~~~~l~~~~~~~~~~-~gV~~i~g~-a~~~--d 156 (519)
T 3qfa_A 91 HQAALLGQALQDSRNYGWKVEETVKHD----------WDRMIEAVQNHIGSLNWGYRVALRE-KKVVYENAY-GQFI--G 156 (519)
T ss_dssp HHHHHHHHHHHHHHHTTBCCCSSCCBC----------HHHHHHHHHHHHHHHHHHHHHHHHH-TTCEEECSE-EEEE--E
T ss_pred HHHHHHHHHHHHHHhcCcccCCcCccC----------HHHHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEEE-EEEe--e
Confidence 444455566677778887654311110 1110000000011122222333444 589999875 3222 2
Q ss_pred CCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccccc
Q 006387 245 LDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHI 283 (647)
Q Consensus 245 ~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~ 283 (647)
.. . +.+. ..+|+...+.++.||||||+....
T Consensus 157 -~~---~---v~v~-~~~g~~~~i~~d~lViATGs~p~~ 187 (519)
T 3qfa_A 157 -PH---R---IKAT-NNKGKEKIYSAERFLIATGERPRY 187 (519)
T ss_dssp -TT---E---EEEE-CTTCCCCEEEEEEEEECCCEEECC
T ss_pred -CC---E---EEEE-cCCCCEEEEECCEEEEECCCCcCC
Confidence 22 1 2332 245655579999999999976543
No 21
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.65 E-value=5.5e-15 Score=163.91 Aligned_cols=154 Identities=23% Similarity=0.261 Sum_probs=92.4
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecC-CCCC-CccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHH
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE-PHES-NTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDET 162 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~-~~~G-~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~ 162 (647)
..+|||+|||||+||+.||+.|++.| +|+|||+.. ..++ ++..+.||+.. .++.+.+....++
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~---------~~lv~el~al~g~----- 84 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAK---------GQITREIDALGGE----- 84 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHH---------HHHHHHHHHHTCS-----
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhH---------HHHHHHHHhcccH-----
Confidence 44699999999999999999999999 999999974 2222 22223333321 1122222111111
Q ss_pred HHHHHHHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEE
Q 006387 163 VRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLL 242 (647)
Q Consensus 163 ~~~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~ 242 (647)
...++...|+.|.....+. ......+|. .. ....+...|.+.+.+.+|++++.. .|+++.
T Consensus 85 ----------~~~~~d~~gi~f~~l~~~k-----gpav~~~r~--~~--Dr~~l~~~L~~~l~~~~GV~I~~~-~V~~L~ 144 (641)
T 3cp8_A 85 ----------MGKAIDATGIQFRMLNRSK-----GPAMHSPRA--QA--DKTQYSLYMRRIVEHEPNIDLLQD-TVIGVS 144 (641)
T ss_dssp ----------HHHHHHHHEEEEEEECSSS-----CTTTCEEEE--EE--CHHHHHHHHHHHHHTCTTEEEEEC-CEEEEE
T ss_pred ----------HHHHHHhcCCchhhccccc-----Cccccchhh--hc--CHHHHHHHHHHHHHhCCCCEEEee-EEEEEE
Confidence 0122334556554321110 001111111 11 234567778888876569999754 899998
Q ss_pred ecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006387 243 TTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 243 ~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~ 282 (647)
.+ ++ +|.||.. .+|+ .|.|+.||+|||++..
T Consensus 145 ~d-~g---~V~GV~t---~~G~--~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 145 AN-SG---KFSSVTV---RSGR--AIQAKAAILACGTFLN 175 (641)
T ss_dssp EE-TT---EEEEEEE---TTSC--EEEEEEEEECCTTCBT
T ss_pred ec-CC---EEEEEEE---CCCc--EEEeCEEEECcCCCCC
Confidence 76 44 6888765 3464 6999999999999864
No 22
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.63 E-value=9.8e-17 Score=176.34 Aligned_cols=156 Identities=21% Similarity=0.266 Sum_probs=89.9
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHH
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVR 164 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~ 164 (647)
..+|||+|||||+||++||+.|++.| +|+||||......++....||.+... -|.|....
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~-------------------gciPsk~l 64 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNV-------------------GCIPKKLM 64 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHH-------------------SHHHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeeccc-------------------CCcccHHH
Confidence 35799999999999999999999999 99999985443323233345554221 14455554
Q ss_pred HHHHHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEEec
Q 006387 165 VVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTT 244 (647)
Q Consensus 165 ~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~ 244 (647)
.........+..+..+|+.+.....-. +.......+.....+...+...+.+ .+|+++.+. +. ..+
T Consensus 65 ~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~-~~V~~i~g~-~~--~~~ 130 (488)
T 3dgz_A 65 HQAALLGGMIRDAHHYGWEVAQPVQHN----------WKTMAEAVQNHVKSLNWGHRVQLQD-RKVKYFNIK-AS--FVD 130 (488)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCSSCCCC----------HHHHHHHHHHHHHHHHHHHHHHHHH-TTCEEECCE-EE--ESS
T ss_pred HHHHHHHHHHHHHHhcCcccCCcCccC----------HHHHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEEE-EE--Ecc
Confidence 455555566677778888764211111 0100000000011122223333444 489998774 22 122
Q ss_pred CCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006387 245 LDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 245 ~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~ 282 (647)
.. . +.+. ..+|+...+.++.||||||+...
T Consensus 131 -~~---~---v~v~-~~~g~~~~~~~d~lViATGs~p~ 160 (488)
T 3dgz_A 131 -EH---T---VRGV-DKGGKATLLSAEHIVIATGGRPR 160 (488)
T ss_dssp -SS---E---EEEE-CTTSCEEEEEEEEEEECCCEEEC
T ss_pred -CC---e---EEEE-eCCCceEEEECCEEEEcCCCCCC
Confidence 22 2 2332 34566668999999999997654
No 23
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.60 E-value=6.3e-16 Score=169.41 Aligned_cols=39 Identities=38% Similarity=0.543 Sum_probs=35.3
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCc
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNT 126 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t 126 (647)
+|||+|||||+||++||+.|++.| +|+||||.+..+|.+
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~ 42 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKT 42 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSB
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCC
Confidence 699999999999999999999999 999999988665544
No 24
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.59 E-value=1.1e-15 Score=168.06 Aligned_cols=39 Identities=36% Similarity=0.542 Sum_probs=33.2
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G 124 (647)
+.++||+|||||+||++||+.|++.| +|+||||....||
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG 62 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGG 62 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSH
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 44699999999999999999999999 9999999766544
No 25
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.59 E-value=3.7e-16 Score=171.51 Aligned_cols=156 Identities=18% Similarity=0.254 Sum_probs=86.7
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCC-CCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHH
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHE-SNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETV 163 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~-G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~ 163 (647)
..+|||+|||||+||++||+.|++.| +|+||||..... ..+.+..||.+... -|.|...
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~-------------------gciPsk~ 67 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNV-------------------GCIPKKL 67 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHH-------------------SHHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeeccc-------------------CchhhHH
Confidence 34699999999999999999999999 999999743321 12223345544221 1445544
Q ss_pred HHHHHHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEEe
Q 006387 164 RVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLT 243 (647)
Q Consensus 164 ~~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~ 243 (647)
.....+....+..+..+|+.+.....-. +.......+..-..+...+...+.+ .+|+++.+... +.
T Consensus 68 l~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~g~a~--~~- 133 (483)
T 3dgh_A 68 MHQASLLGEAVHEAAAYGWNVDDKIKPD----------WHKLVQSVQNHIKSVNWVTRVDLRD-KKVEYINGLGS--FV- 133 (483)
T ss_dssp HHHHHHHHHHHHHHHHTTBCCCCCCCBC----------HHHHHHHHHHHHHHHHHHHHHHHHH-TTCEEECSEEE--EE-
T ss_pred HHHHHHHHHHHHHHHhcCcccCCcCccC----------HHHHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeEEE--Ec-
Confidence 4444555566667777887664311100 0000000000001111122233444 48999887532 22
Q ss_pred cCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccccc
Q 006387 244 TLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHI 283 (647)
Q Consensus 244 ~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~ 283 (647)
+ .. . +.+ ...+|+ ..+.++.||||||+....
T Consensus 134 ~-~~---~---v~v-~~~~g~-~~~~~d~lviATGs~p~~ 164 (483)
T 3dgh_A 134 D-SH---T---LLA-KLKSGE-RTITAQTFVIAVGGRPRY 164 (483)
T ss_dssp E-TT---E---EEE-ECTTCC-EEEEEEEEEECCCEEECC
T ss_pred c-CC---E---EEE-EeCCCe-EEEEcCEEEEeCCCCcCC
Confidence 2 22 1 222 224454 579999999999976543
No 26
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.59 E-value=8.1e-16 Score=158.70 Aligned_cols=51 Identities=18% Similarity=0.131 Sum_probs=40.0
Q ss_pred cCceEECCCCCcccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhhc
Q 006387 436 CGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 436 ~GGi~vD~~~~T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
..|+.||+++||++||+||||||+ ++.+ ++ ...|+-.|++||.+|.+|+++
T Consensus 263 ~~G~iv~~~~~Ts~pgIyA~GDv~-~~~~---~~----~~~A~~~G~~AA~~~~~yL~~ 313 (314)
T 4a5l_A 263 DDGYILTEGPKTSVDGVFACGDVC-DRVY---RQ----AIVAAGSGCMAALSCEKWLQT 313 (314)
T ss_dssp TTSCBCCBTTBCSSTTEEECSTTT-CSSC---CC----HHHHHHHHHHHHHHHHHHHHT
T ss_pred CCeeEeCCCCccCCCCEEEEEecc-CCcc---hH----HHHHHHHHHHHHHHHHHHHhc
Confidence 457779999999999999999997 3321 22 344667899999999999864
No 27
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.57 E-value=2.1e-15 Score=165.55 Aligned_cols=142 Identities=21% Similarity=0.294 Sum_probs=80.7
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHHH
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
.+|||+|||||+||++||+.|++.| +|+||||... || ++.+.| |.|.....
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~-GG-~~~~~g--------------------------cip~k~l~ 76 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEYRI-GG-TCVIRG--------------------------CVPKKLYF 76 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT-TH-HHHHHS--------------------------HHHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCCCC-CC-ceeccC--------------------------ccccHHHH
Confidence 4699999999999999999999999 9999999443 32 221111 33444444
Q ss_pred HHHHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEEecC
Q 006387 166 VCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTL 245 (647)
Q Consensus 166 ~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~ 245 (647)
...+....+..+..+|+.+... .+ .+.......+.....+...+...+.+ .+++++.+. +..+ +
T Consensus 77 ~~a~~~~~~~~~~~~g~~~~~~---~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~g~-~~~i--~- 140 (484)
T 3o0h_A 77 YASQYAQEFSKSIGFGWKYADP---IF--------NWEKLVAAKNKEISRLEGLYREGLQN-SNVHIYESR-AVFV--D- 140 (484)
T ss_dssp HHHHHHHHHHHHGGGTBCCCCC---EE--------CHHHHHHHHHHHHHHHHHHHHHHHHH-TTCEEEESC-EEEE--E-
T ss_pred HHHHHHHHHHHHHhCCcccCCC---cc--------CHHHHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeE-EEEe--e-
Confidence 4444555555666666654311 00 01111000011112333344445555 489998873 3333 2
Q ss_pred CCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006387 246 DGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 246 ~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~ 282 (647)
.. . +.+ . .+++ .+.++.+|+|||+...
T Consensus 141 ~~---~---v~v-~-~~~~--~~~~d~lviAtG~~p~ 167 (484)
T 3o0h_A 141 EH---T---LEL-S-VTGE--RISAEKILIATGAKIV 167 (484)
T ss_dssp TT---E---EEE-T-TTCC--EEEEEEEEECCCEEEC
T ss_pred CC---E---EEE-e-cCCe--EEEeCEEEEccCCCcc
Confidence 22 2 222 1 1333 5899999999998664
No 28
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.57 E-value=5.2e-15 Score=162.31 Aligned_cols=38 Identities=26% Similarity=0.481 Sum_probs=34.0
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G 124 (647)
.++||+|||||+||++||+.|++.| +|+|||+.+..+|
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG 43 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGG 43 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCC
Confidence 4689999999999999999999999 9999999765543
No 29
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.56 E-value=9.6e-16 Score=159.22 Aligned_cols=116 Identities=18% Similarity=0.262 Sum_probs=77.1
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHHH
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
..+||+|||||+||++||+.|++.| +|+|+|+.+..+|...... + ..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~--------~--------------~~---------- 53 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALY--------P--------------EK---------- 53 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHC--------T--------------TS----------
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcC--------C--------------Cc----------
Confidence 3589999999999999999999999 9999999876543210000 0 00
Q ss_pred HHHHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEEecC
Q 006387 166 VCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTL 245 (647)
Q Consensus 166 ~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~ 245 (647)
.+.. ..+. ....+..+...+.+.+.+ .+++++.++.|+++..++
T Consensus 54 -----------------~~~~----------~~~~--------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~i~~~~ 97 (332)
T 3lzw_A 54 -----------------YIYD----------VAGF--------PKIRAQELINNLKEQMAK-FDQTICLEQAVESVEKQA 97 (332)
T ss_dssp -----------------EECC----------STTC--------SSEEHHHHHHHHHHHHTT-SCCEEECSCCEEEEEECT
T ss_pred -----------------eEec----------cCCC--------CCCCHHHHHHHHHHHHHH-hCCcEEccCEEEEEEECC
Confidence 0000 0000 011345677777777776 499999999999998764
Q ss_pred CCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcc
Q 006387 246 DGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGA 280 (647)
Q Consensus 246 ~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~ 280 (647)
++ .+ -+. ..+|+ +.++.||+|||..
T Consensus 98 ~~---~~-~v~---~~~g~---~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 98 DG---VF-KLV---TNEET---HYSKTVIITAGNG 122 (332)
T ss_dssp TS---CE-EEE---ESSEE---EEEEEEEECCTTS
T ss_pred CC---cE-EEE---ECCCE---EEeCEEEECCCCC
Confidence 42 11 122 23443 8999999999983
No 30
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.56 E-value=1.2e-15 Score=157.80 Aligned_cols=53 Identities=17% Similarity=0.225 Sum_probs=42.9
Q ss_pred cCceEECCCCCcccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhhc
Q 006387 436 CGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 436 ~GGi~vD~~~~T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
.|+|.||++++|++|||||+|||++ . . ........|+..|+.||.++++++++
T Consensus 266 ~g~i~vd~~~~t~~~~vya~GD~~~-~-~----~~~~~~~~A~~~g~~aa~~i~~~l~~ 318 (323)
T 3f8d_A 266 NGYIKVDEWMRTSVPGVFAAGDCTS-A-W----LGFRQVITAVAQGAVAATSAYRYVTE 318 (323)
T ss_dssp TSSBCCCTTCBCSSTTEEECSTTBS-T-T----TTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEecCCCceecCCCEEEcceecC-C-C----CcccceeehhhHHHHHHHHHHHHHHH
Confidence 5899999999999999999999972 2 1 11235677888999999999988754
No 31
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.54 E-value=5e-15 Score=162.34 Aligned_cols=36 Identities=36% Similarity=0.552 Sum_probs=32.8
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
+..+||+|||||+||++||+.|++.| +|+|||+...
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~~ 54 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESHKL 54 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Confidence 45799999999999999999999999 9999998743
No 32
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.53 E-value=1.8e-14 Score=151.86 Aligned_cols=118 Identities=16% Similarity=0.230 Sum_probs=77.5
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHHH
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
..+||+|||||+||++||+.|++.| +|+|||+.+..+|..... .+.
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~--------~~~------------------------- 59 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAAL--------YPE------------------------- 59 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHT--------CTT-------------------------
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccc--------CCC-------------------------
Confidence 4689999999999999999999999 999999987543211000 000
Q ss_pred HHHHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEEecC
Q 006387 166 VCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTL 245 (647)
Q Consensus 166 ~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~ 245 (647)
..+.. ..+ . ....+..+...|.+.+.+ .+++++.++.|+.+..++
T Consensus 60 ----------------~~~~~----------~~~--~------~~~~~~~~~~~l~~~~~~-~~~~~~~~~~v~~i~~~~ 104 (360)
T 3ab1_A 60 ----------------KHIYD----------VAG--F------PEVPAIDLVESLWAQAER-YNPDVVLNETVTKYTKLD 104 (360)
T ss_dssp ----------------SEECC----------STT--C------SSEEHHHHHHHHHHHHHT-TCCEEECSCCEEEEEECT
T ss_pred ----------------ccccc----------CCC--C------CCCCHHHHHHHHHHHHHH-hCCEEEcCCEEEEEEECC
Confidence 00000 000 0 011245667777777776 489999999999998764
Q ss_pred CCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 246 DGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 246 ~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
++ .+ -+. ..+|+ .+.++.||+|||..+
T Consensus 105 ~~---~~-~v~---~~~g~--~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 105 DG---TF-ETR---TNTGN--VYRSRAVLIAAGLGA 131 (360)
T ss_dssp TS---CE-EEE---ETTSC--EEEEEEEEECCTTCS
T ss_pred Cc---eE-EEE---ECCCc--EEEeeEEEEccCCCc
Confidence 32 12 122 23453 589999999999854
No 33
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.51 E-value=7.8e-15 Score=160.45 Aligned_cols=38 Identities=26% Similarity=0.368 Sum_probs=34.3
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G 124 (647)
.++||+|||||+||++||+.|++.| +|+|+|+.+..+|
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG 43 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGG 43 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccc
Confidence 4689999999999999999999999 9999999865544
No 34
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.51 E-value=3.2e-14 Score=155.31 Aligned_cols=37 Identities=30% Similarity=0.345 Sum_probs=33.5
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G 124 (647)
+|||+|||||+||++||+.|++.| +|+||||....||
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG 41 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGG 41 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCC
Confidence 589999999999999999999999 9999997765543
No 35
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.51 E-value=8.7e-15 Score=152.46 Aligned_cols=53 Identities=13% Similarity=0.177 Sum_probs=40.9
Q ss_pred cCceEECCCCCcccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhhc
Q 006387 436 CGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 436 ~GGi~vD~~~~T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
.|+|.||++++|++|||||+|||+ +.++..+ ....|...|+.|+.++..++..
T Consensus 266 ~g~i~vd~~~~t~~~~vya~GD~~--~~~~~~~----~~~~A~~~g~~aa~~i~~~l~~ 318 (335)
T 2zbw_A 266 KNKIKVDTTMATSIPGVYACGDIV--TYPGKLP----LIVLGFGEAAIAANHAAAYANP 318 (335)
T ss_dssp TTEEECCTTCBCSSTTEEECSTTE--ECTTCCC----CHHHHHHHHHHHHHHHHHHHCT
T ss_pred CCeeeeCCCCCCCCCCEEEecccc--ccCcchh----hhhhhHHHHHHHHHHHHHHhhh
Confidence 689999999999999999999997 3333222 2345666788899998887754
No 36
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.51 E-value=1.3e-14 Score=158.99 Aligned_cols=34 Identities=29% Similarity=0.509 Sum_probs=32.0
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
.++||+|||||+||++||+.|++.| +|+|||+..
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4689999999999999999999999 999999974
No 37
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.51 E-value=1.5e-14 Score=157.96 Aligned_cols=33 Identities=27% Similarity=0.515 Sum_probs=31.3
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
++||+|||||+||++||+.|++.| +|+|+|+..
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~ 36 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY 36 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 589999999999999999999999 999999973
No 38
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.50 E-value=5.5e-15 Score=161.32 Aligned_cols=34 Identities=29% Similarity=0.368 Sum_probs=31.5
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
.+|||+|||||++|++||+.|++.| +|+||||..
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~~ 38 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEFR 38 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 3589999999999999999999999 999999943
No 39
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.50 E-value=1.8e-12 Score=143.90 Aligned_cols=153 Identities=22% Similarity=0.272 Sum_probs=89.2
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecC--CCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHH
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE--PHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETV 163 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~--~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~ 163 (647)
.+|||||||||+||+.||+.|++.| +|+|||+.. ....++..+.||+. . .++.+.+....+.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia--------~-~~lv~ei~algg~------ 91 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIG--------K-GHLVKEVDALGGL------ 91 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTT--------H-HHHHHHHHHTTCS------
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchh--------h-HHHHHHHHHhccH------
Confidence 3699999999999999999999999 999999974 22111111222221 1 1111111111110
Q ss_pred HHHHHHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEEe
Q 006387 164 RVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLT 243 (647)
Q Consensus 164 ~~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~ 243 (647)
...+....++.|....... .......|. ......+...|.+.+.+..|++++ ++.|++|..
T Consensus 92 ---------~~~~~d~~gi~f~~l~~~k-----gpav~~~r~----~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~ 152 (651)
T 3ces_A 92 ---------MAKAIDQAGIQFRILNASK-----GPAVRATRA----QADRVLYRQAVRTALENQPNLMIF-QQAVEDLIV 152 (651)
T ss_dssp ---------HHHHHHHHEEEEEEESTTS-----CGGGCEEEE----EECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEE
T ss_pred ---------HHHHhhhcccchhhhhccc-----Ccccccchh----hCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEe
Confidence 0112233445443211000 000001111 112345677788888764699995 568999987
Q ss_pred cCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006387 244 TLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 244 ~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~ 282 (647)
+ ++ +|.||.+ .+|. .|.|+.||+|||+++.
T Consensus 153 e-~g---~V~GV~t---~dG~--~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 153 E-ND---RVVGAVT---QMGL--KFRAKAVVLTVGTFLD 182 (651)
T ss_dssp S-SS---BEEEEEE---TTSE--EEEEEEEEECCSTTTC
T ss_pred c-CC---EEEEEEE---CCCC--EEECCEEEEcCCCCcc
Confidence 6 44 6888865 3563 6899999999999875
No 40
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.49 E-value=3.3e-14 Score=155.37 Aligned_cols=37 Identities=27% Similarity=0.443 Sum_probs=33.5
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G 124 (647)
++||+|||||+||++||+.|++.| +|+|||+.+..+|
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG 39 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGG 39 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCC
Confidence 489999999999999999999999 9999999865543
No 41
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.49 E-value=3.7e-14 Score=155.68 Aligned_cols=30 Identities=43% Similarity=0.627 Sum_probs=29.2
Q ss_pred ccCEEEECcchHHHHHHHHHHh-cC-CeEEEE
Q 006387 88 YFDFSVIGSGVAGLCYALEVAK-HG-TVAVIT 117 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~-~G-~V~llE 117 (647)
+|||+|||||+||++||+.|++ .| +|+|||
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE 34 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVID 34 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEE
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 5899999999999999999999 99 999999
No 42
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.48 E-value=1.5e-14 Score=156.41 Aligned_cols=50 Identities=22% Similarity=0.191 Sum_probs=37.4
Q ss_pred CCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccccC
Q 006387 228 PNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIY 284 (647)
Q Consensus 228 ~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~~ 284 (647)
.+++++.++.|+.+..+. . . +.+.+..+++...+.++.+|||||+.....
T Consensus 70 ~~i~~~~~~~V~~id~~~-~----~--~~~~~~~~~~~~~~~yd~lVIATGs~p~~p 119 (437)
T 4eqs_A 70 KQITVKTYHEVIAINDER-Q----T--VSVLNRKTNEQFEESYDKLILSPGASANSL 119 (437)
T ss_dssp HCCEEEETEEEEEEETTT-T----E--EEEEETTTTEEEEEECSEEEECCCEEECCC
T ss_pred cCCEEEeCCeEEEEEccC-c----E--EEEEeccCCceEEEEcCEEEECCCCccccc
Confidence 389999999999987652 2 2 334445567777899999999999876544
No 43
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.47 E-value=6.3e-14 Score=153.99 Aligned_cols=32 Identities=44% Similarity=0.609 Sum_probs=30.1
Q ss_pred cccCEEEECcchHHHHHHHHHHh-cC-CeEEEEe
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAK-HG-TVAVITK 118 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~-~G-~V~llEk 118 (647)
.++||+|||||+||++||+.|++ .| +|+|||+
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 36999999999999999999999 99 9999993
No 44
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.47 E-value=5e-14 Score=153.37 Aligned_cols=33 Identities=27% Similarity=0.471 Sum_probs=31.3
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
++||+|||||+||++||+.|++.| +|+|+|+..
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 36 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKGN 36 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 589999999999999999999999 999999973
No 45
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.44 E-value=2e-13 Score=149.32 Aligned_cols=39 Identities=33% Similarity=0.400 Sum_probs=34.6
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G 124 (647)
+.++||+|||||+||++||+.|++.| +|+|||+.+..+|
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG 43 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGG 43 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCC
Confidence 34689999999999999999999999 9999999865543
No 46
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.43 E-value=1e-13 Score=142.71 Aligned_cols=51 Identities=24% Similarity=0.272 Sum_probs=41.7
Q ss_pred cCceEECCCCCcccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhhc
Q 006387 436 CGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 436 ~GGi~vD~~~~T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
.|.|.||++++|++|||||+|||+..+ ......|+..|+.||.++.+++++
T Consensus 263 ~g~i~vd~~~~t~~~~v~a~GD~~~~~--------~~~~~~A~~~g~~aa~~i~~~l~~ 313 (315)
T 3r9u_A 263 GGQVSVDLKMQTSVAGLFAAGDLRKDA--------PKQVICAAGDGAVAALSAMAYIES 313 (315)
T ss_dssp TSCBCCCTTCBCSSTTEEECGGGBTTC--------CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEeCCCcccCCCCEEEeecccCCc--------hhhhhhHHhhHHHHHHHHHHHHHh
Confidence 478999999999999999999997211 234677888999999999988753
No 47
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.43 E-value=9.8e-14 Score=141.54 Aligned_cols=50 Identities=20% Similarity=0.179 Sum_probs=40.5
Q ss_pred cC-ceEECCCCCcccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhhc
Q 006387 436 CG-GVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 436 ~G-Gi~vD~~~~T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
.| .|.||++++|++|||||+|||+ +. ......|+..|+.||.++.+++..
T Consensus 243 ~G~~i~vd~~~~t~~~~vya~GD~~-~~--------~~~~~~A~~~g~~aa~~i~~~l~~ 293 (297)
T 3fbs_A 243 MGSTIVTDPMKQTTARGIFACGDVA-RP--------AGSVALAVGDGAMAGAAAHRSILF 293 (297)
T ss_dssp TEEEECCCTTCBCSSTTEEECSGGG-CT--------TCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCceEEeCCCCccCCCCEEEEeecC-Cc--------hHHHHHHHHhHHHHHHHHHHHHhh
Confidence 35 6999999999999999999997 22 124567888899999999888743
No 48
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.43 E-value=7.9e-12 Score=132.68 Aligned_cols=147 Identities=18% Similarity=0.236 Sum_probs=89.9
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHH
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVR 164 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~ 164 (647)
+.+|||+||||||||+++|+.|+++| +|+|+||.+..+... ..++++..
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~-~~g~~l~~----------------------------- 51 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPV-RCGEGLSK----------------------------- 51 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSC-CSCCEEET-----------------------------
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCC-ceecccCH-----------------------------
Confidence 35699999999999999999999999 999999976543221 11222210
Q ss_pred HHHHHhHHHHHHHHHcCCCcccC-------------CCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcE
Q 006387 165 VVCTEGPDRIRELIAIGASFDRG-------------EDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNIS 231 (647)
Q Consensus 165 ~~~~~~~~~i~~l~~~Gv~~~~~-------------~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~ 231 (647)
..++++|+..... +++................+. ..-..+...|.+.+.+ .|++
T Consensus 52 ----------~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~R~~~~~~L~~~a~~-~G~~ 118 (397)
T 3oz2_A 52 ----------GILNEADIKADRSFIANEVKGARIYGPSEKRPIILQSEKAGNEVGYV--LERDKFDKHLAALAAK-AGAD 118 (397)
T ss_dssp ----------HHHHHTTCCCCTTTEEEEESEEEEECTTCSSCEEEECSSSSCCCEEE--ECHHHHHHHHHHHHHH-HTCE
T ss_pred ----------HHHHHcCCCchhhhhhcccceEEEEeCCCceEeeccccccCCceeEE--EEHHHHHHHHHHHHHh-cCcE
Confidence 0111222221100 011000000000000000000 1234566778888877 4999
Q ss_pred EEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 232 VFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 232 i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
++.++.++++..+ ++ ++.++... .+++..+++|+.||.|+|..+
T Consensus 119 ~~~~~~v~~~~~~-~~---~~~~v~~~--~~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 119 VWVKSPALGVIKE-NG---KVAGAKIR--HNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EESSCCEEEEEEE-TT---EEEEEEEE--ETTEEEEEEEEEEEECCCTTC
T ss_pred Eeeeeeeeeeeec-cc---eeeeeeec--ccccceEEEEeEEEeCCcccc
Confidence 9999999999987 44 67777654 356777899999999999765
No 49
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.43 E-value=2.2e-13 Score=148.60 Aligned_cols=33 Identities=33% Similarity=0.560 Sum_probs=31.8
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
++||+|||||+||++||..|++.| +|+|+|+..
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 689999999999999999999999 999999987
No 50
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.43 E-value=4.8e-13 Score=145.82 Aligned_cols=33 Identities=39% Similarity=0.579 Sum_probs=31.4
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
++||+|||||+||++||+.|++.| +|+|+|+..
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA 37 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 589999999999999999999999 999999974
No 51
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.42 E-value=1.7e-14 Score=158.10 Aligned_cols=38 Identities=32% Similarity=0.445 Sum_probs=33.8
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G 124 (647)
.++||+|||||+||++||+.|++.| +|+|+|+.+..+|
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG 42 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGG 42 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCC
Confidence 3689999999999999999999999 9999999665443
No 52
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.42 E-value=2.8e-12 Score=131.97 Aligned_cols=150 Identities=16% Similarity=0.227 Sum_probs=102.7
Q ss_pred ccccCEEEECcchHHHHHHHHHHhc--C-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHH
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKH--G-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDET 162 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~--G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~ 162 (647)
..++||+|||||++|++||+.|+++ | +|+|||+....+|... ..+..... ...
T Consensus 77 ~~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~-~~g~~~~~-------------------~~~---- 132 (344)
T 3jsk_A 77 HAETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAW-LGGQLFSA-------------------MVM---- 132 (344)
T ss_dssp HHBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTT-CCBTTCCC-------------------EEE----
T ss_pred cCcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccc-cCCccchh-------------------hhc----
Confidence 3469999999999999999999997 8 9999999987655432 11111000 000
Q ss_pred HHHHHHHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEE
Q 006387 163 VRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLL 242 (647)
Q Consensus 163 ~~~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~ 242 (647)
.+..++++.++|++|... |.+.. .. ....+...|.+.+.+.+|++++.++.+++|+
T Consensus 133 -------~~~~~~~L~~~Gv~~~~~--G~~~~----------~~-----~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi 188 (344)
T 3jsk_A 133 -------RKPADVFLDEVGVPYEDE--GDYVV----------VK-----HAALFTSTVLSKVLQRPNVKLFNATTVEDLI 188 (344)
T ss_dssp -------ETTTHHHHHHHTCCCEEC--SSEEE----------ES-----CHHHHHHHHHHHHHTCTTEEEEETEEEEEEE
T ss_pred -------chHHHHHHHHcCCccccc--CCeEE----------Ee-----cHHHHHHHHHHHHHhCCCCEEEeCCEEEEEE
Confidence 022356778889988643 22211 11 1346678888888876799999999999999
Q ss_pred ecCCC---------------CCCeEEEEEEEec---CCC------eEEEEEcCeEEECCCccccc
Q 006387 243 TTLDG---------------PDAVCHGVDTLNV---ETQ------EVVRFISKVTLLASGGAGHI 283 (647)
Q Consensus 243 ~~~~g---------------~~~~v~Gv~~~~~---~~g------~~~~i~Ak~VVlAtGg~~~~ 283 (647)
.++++ ...+|.||++... ..+ +..+|+|+.||+|||+.+.+
T Consensus 189 ~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v 253 (344)
T 3jsk_A 189 TRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPF 253 (344)
T ss_dssp EEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSS
T ss_pred ecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchh
Confidence 87520 0137899987532 112 34689999999999988743
No 53
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.41 E-value=2.1e-12 Score=131.23 Aligned_cols=143 Identities=21% Similarity=0.290 Sum_probs=99.5
Q ss_pred cccCEEEECcchHHHHHHHHHHhc-C-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHH
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKH-G-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVR 164 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~-G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~ 164 (647)
.++||+|||||++|+++|+.|++. | +|+||||.+..++++.. .+++.... ...
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~-~~~~~~~~-------------------~~~----- 92 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWL-GGQLFSAM-------------------IVR----- 92 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTC-CSTTCCCE-------------------EEE-----
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceec-CCcchHHH-------------------HcC-----
Confidence 468999999999999999999997 9 99999999877654432 22221100 000
Q ss_pred HHHHHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEEec
Q 006387 165 VVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTT 244 (647)
Q Consensus 165 ~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~ 244 (647)
....+++.++|++|... +.+.. ......+...|.+.+.+..|+++++++.|+++..+
T Consensus 93 ------~~~~~~l~~~G~~~~~~--~~~~~---------------~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~ 149 (284)
T 1rp0_A 93 ------KPAHLFLDEIGVAYDEQ--DTYVV---------------VKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK 149 (284)
T ss_dssp ------TTTHHHHHHHTCCCEEC--SSEEE---------------ESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEE
T ss_pred ------cHHHHHHHHcCCCcccC--CCEEE---------------ecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEec
Confidence 01245667788887642 11110 01235677788888876569999999999999976
Q ss_pred CCCCCCeEEEEEEEec---------CCCeEEEEEcCeEEECCCccc
Q 006387 245 LDGPDAVCHGVDTLNV---------ETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 245 ~~g~~~~v~Gv~~~~~---------~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
++ ++.|+.+.+. .+++...+.|+.||+|||+.+
T Consensus 150 -~~---~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s 191 (284)
T 1rp0_A 150 -GN---RVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDG 191 (284)
T ss_dssp -TT---EEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSS
T ss_pred -CC---eEEEEEEeccccccccCccccCceEEEECCEEEECCCCch
Confidence 44 7888877531 113445799999999999876
No 54
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.41 E-value=5.3e-14 Score=154.89 Aligned_cols=33 Identities=36% Similarity=0.654 Sum_probs=31.5
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
++||+|||||+||++||+.|++.| +|+|+|+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 489999999999999999999999 999999985
No 55
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.41 E-value=6.4e-13 Score=149.37 Aligned_cols=36 Identities=14% Similarity=0.193 Sum_probs=32.4
Q ss_pred cccCEEEECcchHHHHHHHHHHhc--C-CeEEEEecCCC
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKH--G-TVAVITKAEPH 122 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~--G-~V~llEk~~~~ 122 (647)
...||+|||||+||++||+.|++. | +|+|+|+.+..
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 73 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYI 73 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 357999999999999999999998 7 99999998754
No 56
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.41 E-value=9.4e-13 Score=137.82 Aligned_cols=130 Identities=13% Similarity=0.074 Sum_probs=78.9
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHHHH
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVV 166 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~ 166 (647)
.+||+|||||++|+++|+.|++.| +|+|+|+.+..+|......-... +..+..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~----------------------~~~~~~---- 56 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLH----------------------LFSPAG---- 56 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCB----------------------CSSCGG----
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcE----------------------ecCchh----
Confidence 589999999999999999999999 99999998766543211000000 000000
Q ss_pred HHHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCC
Q 006387 167 CTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLD 246 (647)
Q Consensus 167 ~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~ 246 (647)
...++....+. ... .-.....+...+.+.+.+ .|++++.++.|+++..+ +
T Consensus 57 ------------~~~~~~~~~~~--------~~~--------~~~~~~~~~~~l~~~~~~-~~~~~~~~~~v~~i~~~-~ 106 (357)
T 4a9w_A 57 ------------WSSIPGWPMPA--------SQG--------PYPARAEVLAYLAQYEQK-YALPVLRPIRVQRVSHF-G 106 (357)
T ss_dssp ------------GSCCSSSCCCC--------CSS--------SSCBHHHHHHHHHHHHHH-TTCCEECSCCEEEEEEE-T
T ss_pred ------------hhhCCCCCCCC--------Ccc--------CCCCHHHHHHHHHHHHHH-cCCEEEcCCEEEEEEEC-C
Confidence 00000000000 000 001234566667777776 49999999999999876 3
Q ss_pred CCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006387 247 GPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 247 g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~ 282 (647)
+ .+.++ ...+| .+.++.||+|||.++.
T Consensus 107 ~---~~~~v---~~~~g---~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 107 E---RLRVV---ARDGR---QWLARAVISATGTWGE 133 (357)
T ss_dssp T---EEEEE---ETTSC---EEEEEEEEECCCSGGG
T ss_pred C---cEEEE---EeCCC---EEEeCEEEECCCCCCC
Confidence 3 33223 23444 6899999999997653
No 57
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.40 E-value=8.5e-15 Score=160.90 Aligned_cols=34 Identities=29% Similarity=0.433 Sum_probs=32.0
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
.+|||+|||||+||++||+.|++.| +|+|||+..
T Consensus 7 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 7 INVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 4699999999999999999999999 999999975
No 58
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.40 E-value=1.9e-12 Score=144.16 Aligned_cols=65 Identities=12% Similarity=0.096 Sum_probs=56.4
Q ss_pred chHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 212 TGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 212 ~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
....+...|.+.+.+. |++|+++++|++|..+ ++ ++.||.+.+..+|+...|+|+.||+|+|.++
T Consensus 168 d~~~l~~~L~~~a~~~-G~~i~~~~~V~~l~~~-~g---~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 168 DDARLTLEIMKEAVAR-GAVALNYMKVESFIYD-QG---KVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp CHHHHHHHHHHHHHHT-TCEEEESEEEEEEEEE-TT---EEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHc-CCEEEcCCEEEEEEEc-CC---eEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 4567888999988874 9999999999999987 55 7899999887778777899999999999876
No 59
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.40 E-value=1.4e-13 Score=143.11 Aligned_cols=51 Identities=18% Similarity=0.120 Sum_probs=39.8
Q ss_pred cCceE-ECCCCCcccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhhc
Q 006387 436 CGGVR-AGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 436 ~GGi~-vD~~~~T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
.|.|. +|..++|++|||||+|||++ +. -.....|+..|+.||.++.+++++
T Consensus 285 ~G~i~v~~~~~~t~~~~vya~GD~~~-~~-------~~~~~~A~~~g~~aa~~i~~~l~~ 336 (338)
T 3itj_A 285 AGYIKTVPGSSLTSVPGFFAAGDVQD-SK-------YRQAITSAGSGCMAALDAEKYLTS 336 (338)
T ss_dssp TSCBCCCTTSSBCSSTTEEECGGGGC-SS-------CCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcEEEcCcccccCCCCEEEeeccCC-CC-------ccceeeehhhhHHHHHHHHHHHhc
Confidence 46677 48888999999999999983 21 123567888999999999988753
No 60
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.40 E-value=2.6e-13 Score=147.45 Aligned_cols=33 Identities=30% Similarity=0.498 Sum_probs=31.4
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
++||+|||||+||++||+.|++.| +|+|+|+..
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE 37 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC
Confidence 589999999999999999999999 999999974
No 61
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.39 E-value=2.1e-12 Score=142.94 Aligned_cols=39 Identities=18% Similarity=0.197 Sum_probs=34.8
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G 124 (647)
...+||+|||||+||++||+.|++.| +|+|||+....+|
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG 80 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGG 80 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 45799999999999999999999999 9999999874443
No 62
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.39 E-value=1.2e-12 Score=142.98 Aligned_cols=35 Identities=23% Similarity=0.169 Sum_probs=29.7
Q ss_pred ccCEEEECcchHHHHHHHHHHhc--C-CeEEEEecCCC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKH--G-TVAVITKAEPH 122 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~--G-~V~llEk~~~~ 122 (647)
..||+|||||+||++||+.|++. | +|+|+|+.+..
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~ 40 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRI 40 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcc
Confidence 36899999999999999999998 7 99999998754
No 63
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.39 E-value=2.9e-13 Score=149.09 Aligned_cols=33 Identities=30% Similarity=0.317 Sum_probs=31.5
Q ss_pred ccCEEEECcchHHHHHHHHHHhc---C-CeEEEEecC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKH---G-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~---G-~V~llEk~~ 120 (647)
++||+|||||+||++||+.|++. | +|+|||+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 48999999999999999999999 9 999999987
No 64
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.38 E-value=8.5e-14 Score=151.38 Aligned_cols=35 Identities=23% Similarity=0.421 Sum_probs=31.9
Q ss_pred cCEEEECcchHHHHHHHHHHhc--C-CeEEEEecCCCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKH--G-TVAVITKAEPHE 123 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~--G-~V~llEk~~~~~ 123 (647)
.||+|||||+||++||+.|++. | +|+|+|+.+..+
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g 40 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVG 40 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCc
Confidence 5999999999999999999998 7 999999987543
No 65
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.37 E-value=4.2e-13 Score=151.18 Aligned_cols=34 Identities=38% Similarity=0.507 Sum_probs=31.5
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
...+||+|||||+||++||+.|++.| +|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 34699999999999999999999999 99999984
No 66
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.36 E-value=2.6e-12 Score=139.52 Aligned_cols=35 Identities=29% Similarity=0.331 Sum_probs=31.7
Q ss_pred ccCEEEECcchHHHHHHHHHHhc--C-CeEEEEecCCC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKH--G-TVAVITKAEPH 122 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~--G-~V~llEk~~~~ 122 (647)
.+||+|||||+||++||+.|++. | +|+|+|+.+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~ 40 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWV 40 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCcc
Confidence 47999999999999999999998 6 89999998754
No 67
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.36 E-value=1.2e-12 Score=135.76 Aligned_cols=55 Identities=20% Similarity=0.225 Sum_probs=44.8
Q ss_pred CceEECCCCCcccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhh
Q 006387 437 GGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKK 493 (647)
Q Consensus 437 GGi~vD~~~~T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~ 493 (647)
+.|.+|+.++|++|||||+||++ +.++|.+|.|.. +..++.+|++||+.|.++++
T Consensus 271 ~~iv~~~~~~t~vpGv~aaGDaa-~~v~g~~rmGp~-~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 271 HDVVIHSGAYAGVDNMYFAGMEV-AELDGLNRMGPT-FGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp HHHHHHCEECTTSBTEEECTHHH-HHHHTCCBCCSC-CHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEECCCeEECCCCEEEEchHh-ccccCCCcCchH-HHHHHHHHHHHHHHHHHHhc
Confidence 35667778899999999999998 678888887642 44567889999999999874
No 68
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.36 E-value=1.7e-12 Score=137.71 Aligned_cols=36 Identities=19% Similarity=0.266 Sum_probs=31.8
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCC
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPH 122 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~ 122 (647)
....|+|||||+||++||..|...+ +|+|+|+.+..
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~ 44 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYL 44 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSC
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCC
Confidence 4578999999999999999997777 99999998753
No 69
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.34 E-value=4.8e-13 Score=138.64 Aligned_cols=52 Identities=21% Similarity=0.140 Sum_probs=41.5
Q ss_pred cCceEECCCCCcccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhhcc
Q 006387 436 CGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKST 495 (647)
Q Consensus 436 ~GGi~vD~~~~T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~~ 495 (647)
.|+|.||++++|++||+||+|||+ +.. . .....|...|+.||.++..++...
T Consensus 263 ~g~i~vd~~~~t~~~~vya~GD~~-~~~---~----~~~~~A~~~g~~aa~~i~~~l~~~ 314 (325)
T 2q7v_A 263 DGYVDVRDEIYTNIPMLFAAGDVS-DYI---Y----RQLATSVGAGTRAAMMTERQLAAL 314 (325)
T ss_dssp TSCBCCBTTTBCSSTTEEECSTTT-CSS---C----CCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CccEecCCCCccCCCCEEEeeccc-Ccc---H----HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 588999999999999999999997 221 1 235567788999999999887653
No 70
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.34 E-value=3.3e-12 Score=134.31 Aligned_cols=181 Identities=20% Similarity=0.175 Sum_probs=100.7
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecC-CCCCCccccCCCeeeecC-CCCCHH-H-------HHHHHHHh-cc
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE-PHESNTNYAQGGVSAVLC-PSDSVE-S-------HMQDTIVA-GA 155 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~-~~~G~t~~a~Ggi~~~~~-~~d~~~-~-------~~~~~~~~-g~ 155 (647)
++||+|||||++|+++|+.|+++| +|+||||.. ..+++|..+.|.+..... +.+... . .+.+.... +.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYEYCAARGV 83 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSCSTTSSSCCEECCCCSSCTTCHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCccCcCCccccccCccCCCCCHhHHHHHHHHHHHHHHHHHcCC
Confidence 589999999999999999999999 999999985 555666555444432211 111111 1 11111110 00
Q ss_pred -c--------CCCHHHHHHHHHHhHHHHHHHHHcCCC-cccCCCCCccccccCCcccccee-ecc--CCchHHHHHHHHH
Q 006387 156 -Y--------LCDDETVRVVCTEGPDRIRELIAIGAS-FDRGEDGNLHLAREGGHSHHRIV-HAA--DMTGREIERALLE 222 (647)
Q Consensus 156 -~--------~~~~~~~~~~~~~~~~~i~~l~~~Gv~-~~~~~~g~~~~~~~gg~~~~r~~-~~~--~~~g~~~~~~L~~ 222 (647)
+ ..++... +......+++...|++ +........ ............. ... ......+...|.+
T Consensus 84 ~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~ 158 (369)
T 3dme_A 84 PHQRLGKLIVATSDAEA----SQLDSIARRAGANGVDDLQHIDGAAA-RRLEPALHCTAALVSPSTGIVDSHALMLAYQG 158 (369)
T ss_dssp CEECCCEEEEECSHHHH----TTHHHHHHHHHHTTCCCCEEEEHHHH-HHHCTTCCCSEEEEETTCEEECHHHHHHHHHH
T ss_pred CcccCCEEEEecCHHHH----HHHHHHHHHHHHcCCCceeecCHHHH-HHhCCCceeeeeeECCCCEEECHHHHHHHHHH
Confidence 0 0011111 1112334445556665 321000000 0000000000001 111 1235678899999
Q ss_pred HHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 223 AVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 223 ~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
.+++. |++++++++|++|..++++ .+ .|.. .+|+...++|+.||+|+|.++
T Consensus 159 ~~~~~-Gv~i~~~~~v~~i~~~~~~---~~-~v~~---~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 159 DAESD-GAQLVFHTPLIAGRVRPEG---GF-ELDF---GGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHT-TCEEECSCCEEEEEECTTS---SE-EEEE---CTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHC-CCEEECCCEEEEEEEcCCc---eE-EEEE---CCCceeEEEeCEEEECCCcch
Confidence 99885 9999999999999987443 22 3432 456555799999999999876
No 71
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.34 E-value=2.3e-13 Score=147.90 Aligned_cols=34 Identities=15% Similarity=0.153 Sum_probs=31.1
Q ss_pred cCEEEECcchHHHHHHHHHHhc--C-CeEEEEecCCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKH--G-TVAVITKAEPH 122 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~--G-~V~llEk~~~~ 122 (647)
+||+|||||+||++||..|++. | +|+|||+.+..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNI 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 5899999999999999999998 8 99999998743
No 72
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.34 E-value=1.7e-11 Score=125.49 Aligned_cols=148 Identities=19% Similarity=0.253 Sum_probs=100.6
Q ss_pred ccccCEEEECcchHHHHHHHHHHhc--C-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHH
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKH--G-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDET 162 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~--G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~ 162 (647)
..++||+|||||++|++||+.|++. | +|+|+|+....+|.+... +...... ..
T Consensus 63 ~~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~-g~~~~~~-------------------~~---- 118 (326)
T 2gjc_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLG-GQLFSAM-------------------VM---- 118 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCC-GGGCCCE-------------------EE----
T ss_pred cCcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccccccccc-Ccccchh-------------------hh----
Confidence 3468999999999999999999998 9 999999998876654321 1111000 00
Q ss_pred HHHHHHHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEE
Q 006387 163 VRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLL 242 (647)
Q Consensus 163 ~~~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~ 242 (647)
..+...++.++|++|... +.+... .....+...|.+.+.+.+|+++++++.|++|+
T Consensus 119 -------~~~~~~~L~~~Gv~~~~~--g~~~~~---------------~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll 174 (326)
T 2gjc_A 119 -------RKPAHLFLQELEIPYEDE--GDYVVV---------------KHAALFISTVLSKVLQLPNVKLFNATCVEDLV 174 (326)
T ss_dssp -------ETTTHHHHHHTTCCCEEC--SSEEEE---------------SCHHHHHHHHHHHHHTSTTEEEETTEEEEEEE
T ss_pred -------hhHHHHHHHhhCcccccC--CCeEEE---------------cchHHHHHHHHHHHHHhcCcEEEecceeeeee
Confidence 012256777889988753 222211 02346788888888876799999999999999
Q ss_pred ecCCCC--CCeEEEEEEEec---CCC------eEEEEEc---------------CeEEECCCccc
Q 006387 243 TTLDGP--DAVCHGVDTLNV---ETQ------EVVRFIS---------------KVTLLASGGAG 281 (647)
Q Consensus 243 ~~~~g~--~~~v~Gv~~~~~---~~g------~~~~i~A---------------k~VVlAtGg~~ 281 (647)
.+++.. ..+|.||++... .+| ...+|.| +.||+|||..+
T Consensus 175 ~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~ 239 (326)
T 2gjc_A 175 TRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDG 239 (326)
T ss_dssp ECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC-
T ss_pred ecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCc
Confidence 874210 127899987532 112 3357999 99999999655
No 73
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.33 E-value=6.3e-13 Score=136.71 Aligned_cols=51 Identities=24% Similarity=0.267 Sum_probs=41.1
Q ss_pred cCceEECCCCCcccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhhc
Q 006387 436 CGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 436 ~GGi~vD~~~~T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
.|+|.||++++|++||+||+|||+ +... .....|+..|+.||.++..++..
T Consensus 256 ~g~i~vd~~~~t~~~~vya~GD~~-~~~~-------~~~~~A~~~g~~aa~~i~~~l~~ 306 (310)
T 1fl2_A 256 MGEIIIDAKCETNVKGVFAAGDCT-TVPY-------KQIIIATGEGAKASLSAFDYLIR 306 (310)
T ss_dssp TSCBCCCTTCBCSSTTEEECSTTB-SCSS-------CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEcCCCCccCCCCEEEeeccc-CCcc-------hhhhhhHhhHHHHHHHHHHHHHH
Confidence 578999999999999999999997 2221 23556788899999999888754
No 74
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.33 E-value=7.1e-13 Score=136.36 Aligned_cols=50 Identities=22% Similarity=0.266 Sum_probs=39.7
Q ss_pred cCceEECCCCCcccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhh
Q 006387 436 CGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKK 493 (647)
Q Consensus 436 ~GGi~vD~~~~T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~ 493 (647)
.|+|.||++++|++|||||+|||+ ++. . .....|...|+.||.++.++++
T Consensus 260 ~g~i~vd~~~~t~~~~vya~GD~~-~~~---~----~~~~~A~~~g~~aa~~i~~~l~ 309 (311)
T 2q0l_A 260 YGSIVVDFSMKTNVQGLFAAGDIR-IFA---P----KQVVCAASDGATAALSVISYLE 309 (311)
T ss_dssp TSCBCCCTTCBCSSTTEEECSTTB-TTC---C----CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEeCCccccCCCCeEEccccc-Ccc---h----HHHHHHHHhHHHHHHHHHHHHh
Confidence 588999999999999999999998 321 1 2345677789999999888764
No 75
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.32 E-value=1.3e-10 Score=119.78 Aligned_cols=50 Identities=22% Similarity=0.248 Sum_probs=39.9
Q ss_pred cCceEECCCCCcccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhh
Q 006387 436 CGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKK 493 (647)
Q Consensus 436 ~GGi~vD~~~~T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~ 493 (647)
.|+|.||++++|++||+||+|||+ ++. . .....|...|+.||.++.+++.
T Consensus 267 ~g~i~vd~~~~t~~~~vya~GD~~-~~~---~----~~~~~A~~~g~~aa~~i~~~l~ 316 (319)
T 3cty_A 267 RGYIVVDSRQRTSVPGVYAAGDVT-SGN---F----AQIASAVGDGCKAALSLYSDSI 316 (319)
T ss_dssp TSCBCCCTTCBCSSTTEEECSTTB-TTC---C----CCHHHHHHHHHHHHHHHHHHHT
T ss_pred CccEeCCCCCccCCCCEEEeeccc-Ccc---h----hhHHHHHHHHHHHHHHHHHHhh
Confidence 378999999999999999999997 321 1 1345677889999999988774
No 76
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.32 E-value=5.7e-12 Score=140.98 Aligned_cols=34 Identities=15% Similarity=0.178 Sum_probs=30.9
Q ss_pred cCEEEECcchHHHHHHHHHHhc--C-CeEEEEecCCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKH--G-TVAVITKAEPH 122 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~--G-~V~llEk~~~~ 122 (647)
.||+|||||+||++||..|++. | +|+|+|+.+..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 3799999999999999999998 6 99999998754
No 77
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.32 E-value=2.3e-12 Score=140.60 Aligned_cols=35 Identities=31% Similarity=0.468 Sum_probs=32.1
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
..+||+|||||+||++||+.|++.| +|+|||+...
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~ 38 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGTI 38 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSST
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 3589999999999999999999999 9999999843
No 78
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.31 E-value=5.3e-12 Score=138.23 Aligned_cols=34 Identities=24% Similarity=0.545 Sum_probs=31.2
Q ss_pred cCEEEECcchHHHHHHHHHHhc--C-CeEEEEecCCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKH--G-TVAVITKAEPH 122 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~--G-~V~llEk~~~~ 122 (647)
+||+|||||+||++||+.|++. | +|+|||+.+..
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 73 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIY 73 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCC
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 6999999999999999999996 7 99999998754
No 79
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.31 E-value=4.8e-13 Score=145.65 Aligned_cols=34 Identities=18% Similarity=0.333 Sum_probs=31.5
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
.++||+|||||+||++||+.|++.| +|+|+|+..
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 38 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQA 38 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccCC
Confidence 4689999999999999999999999 999999943
No 80
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.30 E-value=9.4e-12 Score=137.58 Aligned_cols=153 Identities=19% Similarity=0.220 Sum_probs=90.4
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecC-CCCC-CccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHH
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE-PHES-NTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETV 163 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~-~~~G-~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~ 163 (647)
.+|||||||||+||+.||+.|++.| +|+|||+.. ..+. ++..+.||+. . .++.+.+....+.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia--------~-g~lv~eldalgg~------ 90 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIA--------K-GIVVREIDALGGE------ 90 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTT--------H-HHHHHHHHHHTCS------
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccc--------h-HHHHHHHHHhhhH------
Confidence 4699999999999999999999999 999999974 2221 1112222221 1 1111111110010
Q ss_pred HHHHHHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEEe
Q 006387 164 RVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLT 243 (647)
Q Consensus 164 ~~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~ 243 (647)
...++...++.|...... .+......... .....+...|.+.+.+.+|++++ ++.|++|..
T Consensus 91 ---------~~~~~d~~gi~f~~l~~~-------kGpav~~~r~~--~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~ 151 (637)
T 2zxi_A 91 ---------MGKAIDQTGIQFKMLNTR-------KGKAVQSPRAQ--ADKKRYREYMKKVCENQENLYIK-QEEVVDIIV 151 (637)
T ss_dssp ---------HHHHHHHHEEEEEEESTT-------SCGGGCEEEEE--ECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEE
T ss_pred ---------HHHHhhhcccceeecccc-------cCccccchhhh--CCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEe
Confidence 011223345555421100 01001111011 12356777888888765699996 579999988
Q ss_pred cCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006387 244 TLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 244 ~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~ 282 (647)
+ ++ +|.||.. .+|. .|.|+.||+|||++..
T Consensus 152 e-~g---~V~GV~t---~dG~--~i~AdaVVLATG~~s~ 181 (637)
T 2zxi_A 152 K-NN---QVVGVRT---NLGV--EYKTKAVVVTTGTFLN 181 (637)
T ss_dssp S-SS---BEEEEEE---TTSC--EEECSEEEECCTTCBT
T ss_pred c-CC---EEEEEEE---CCCc--EEEeCEEEEccCCCcc
Confidence 6 44 6888865 3464 5999999999999865
No 81
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.30 E-value=2.7e-11 Score=135.13 Aligned_cols=190 Identities=16% Similarity=0.107 Sum_probs=105.6
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecC--CCCCHHHHHHHH-------HHhccc
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLC--PSDSVESHMQDT-------IVAGAY 156 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~--~~d~~~~~~~~~-------~~~g~~ 156 (647)
.++||+|||||++|+++|+.|+++| +|+|||+....+|+|..+.|-+..... ...... ...+. ......
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~GtS~~s~gli~~g~ryl~~~~~~-l~~~~~~e~~~l~~~~~~ 109 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEGTSSRSTKLVHGGIRYLKTFDVE-VVADTVGERAVVQGIAPH 109 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSGGGSSCSEECCCGGGGGGTCHH-HHHHHHHHHHHHHHHCTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccccccccccchhhccChH-HHHHHHHHHHHHHHhCcc
Confidence 4689999999999999999999999 999999998887877666543321110 000110 00110 111111
Q ss_pred CC----------CH--H--HHHHHHHHhHHHHHHHHH---cCCCcccCCCCCc-cccc-cCCccccc-eeec-cCCchHH
Q 006387 157 LC----------DD--E--TVRVVCTEGPDRIRELIA---IGASFDRGEDGNL-HLAR-EGGHSHHR-IVHA-ADMTGRE 215 (647)
Q Consensus 157 ~~----------~~--~--~~~~~~~~~~~~i~~l~~---~Gv~~~~~~~g~~-~~~~-~gg~~~~r-~~~~-~~~~g~~ 215 (647)
+. .. . .-...........+++.. .+........... ...+ ........ ..+. .......
T Consensus 110 ~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~e~~~~~P~l~~~~~~gg~~~~dg~v~~~~ 189 (571)
T 2rgh_A 110 IPKPDPMLLPIYEDEGATTFNMFSVKVAMDLYDKLANVTGTKYENYTLTPEEVLEREPFLKKEGLKGAGVYLDFRNNDAR 189 (571)
T ss_dssp SSEECCEEEEEESSSSSCSCCHHHHHHHHHHHHHHHTCSSSTTCCEEECHHHHHHHCTTSCCTTEEEEEEECCEECCHHH
T ss_pred cccccCceEEeecccccccccHHHHHHHHHHHHHHhhhhccCCCcEEECHHHHHHhCcCCchhhceEEEEecCCeEchHH
Confidence 10 00 0 000011111222333331 1221110000000 0000 00000000 0111 1123567
Q ss_pred HHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006387 216 IERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 216 ~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~ 282 (647)
++..+.+.+.+. |++|+++++|++|..+ ++ ++.||.+.|..+|+...|+|+.||+|||.++.
T Consensus 190 l~~~l~~~a~~~-Ga~i~~~t~V~~l~~~-~~---~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~ 251 (571)
T 2rgh_A 190 LVIDNIKKAAED-GAYLVSKMKAVGFLYE-GD---QIVGVKARDLLTDEVIEIKAKLVINTSGPWVD 251 (571)
T ss_dssp HHHHHHHHHHHT-TCEEESSEEEEEEEEE-TT---EEEEEEEEETTTCCEEEEEBSCEEECCGGGHH
T ss_pred HHHHHHHHHHHc-CCeEEeccEEEEEEEe-CC---EEEEEEEEEcCCCCEEEEEcCEEEECCChhHH
Confidence 788888888874 9999999999999987 44 78899888765677667999999999998874
No 82
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.29 E-value=9e-13 Score=143.40 Aligned_cols=37 Identities=32% Similarity=0.554 Sum_probs=33.2
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G 124 (647)
+|||+|||||+||++||+.|++.| +|+|||+.+..+|
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG 38 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGG 38 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSH
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCC
Confidence 379999999999999999999999 9999999865443
No 83
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.28 E-value=3.5e-11 Score=127.50 Aligned_cols=180 Identities=19% Similarity=0.166 Sum_probs=105.2
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHH------HHHHHHHHh-c-c--
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVE------SHMQDTIVA-G-A-- 155 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~------~~~~~~~~~-g-~-- 155 (647)
.++||+|||||++|+++|+.|+++| +|+|||+....+|+|..+.|.+........... ..+.+.... + .
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~~~~gas~~~~g~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~ 83 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRFIGSGSTFRCGTGIRQQFNDEANVRVMKRSVELWKKYSEEYGFSFK 83 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSHHHHCCCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCCccccccCeeeecCCChHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 3689999999999999999999999 999999997777777666665543322111100 111111110 0 0
Q ss_pred ---c---CCCHHHHHHHHHHhHHHHHHHHHcCCCcccCCCCCcc--ccccC-Cccccceeecc--CCchHHHHHHHHHHH
Q 006387 156 ---Y---LCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLH--LAREG-GHSHHRIVHAA--DMTGREIERALLEAV 224 (647)
Q Consensus 156 ---~---~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~--~~~~g-g~~~~r~~~~~--~~~g~~~~~~L~~~~ 224 (647)
. ..+++... ......+++.++|+++.......+. ..... .......+... ......+...|.+.+
T Consensus 84 ~~g~l~~~~~~~~~~----~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 159 (382)
T 1y56_B 84 QTGYLFLLYDDEEVK----TFKRNIEIQNKFGVPTKLITPEEAKEIVPLLDISEVIAASWNPTDGKADPFEATTAFAVKA 159 (382)
T ss_dssp CCCEEEEECSHHHHH----HHHHHHHHHHHTTCCCEEECHHHHHHSSTTCCCTTCCEEEEETTCCEECHHHHHHHHHHHH
T ss_pred ccceEEEEeCHHHHH----HHHHHHHHHHhcCCCcEEeCHHHHHHhCCCCCcccceEEEEcCCCeeECHHHHHHHHHHHH
Confidence 0 01222211 1223345566677765321100000 00000 00000011111 123567888899998
Q ss_pred HcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 225 VSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 225 ~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
.+. |++++++++|+++..+ ++ ++.||.. .+| .++|+.||+|+|.++
T Consensus 160 ~~~-Gv~i~~~~~v~~i~~~-~~---~v~gv~~---~~g---~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 160 KEY-GAKLLEYTEVKGFLIE-NN---EIKGVKT---NKG---IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHT-TCEEECSCCEEEEEES-SS---BEEEEEE---TTE---EEECSEEEECCGGGH
T ss_pred HHC-CCEEECCceEEEEEEE-CC---EEEEEEE---CCc---EEECCEEEECcchhH
Confidence 874 9999999999999886 34 5777653 344 589999999999876
No 84
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.28 E-value=7.4e-11 Score=125.90 Aligned_cols=181 Identities=17% Similarity=0.133 Sum_probs=105.6
Q ss_pred ccccCEEEECcchHHHHHHHHHHh-cC--CeEEEEecCCCCCCccccCCCeeeecCCCCCHH------HHHHHHHHhccc
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAK-HG--TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVE------SHMQDTIVAGAY 156 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~-~G--~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~------~~~~~~~~~g~~ 156 (647)
+.++||+|||||++|+++|+.|++ +| +|+|||+....+|+|..+.|.+........... ..+.+.......
T Consensus 19 ~~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~~~~gas~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 98 (405)
T 2gag_B 19 KKSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWLAGGNMARNTTIIRSNYLWDESAGIYEKSLKLWEQLPEDLEY 98 (405)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSSTTCSGGGTSCCCBCCCCSSHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCCCCCCcccccCceeeecCCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 457999999999999999999999 88 899999999777777777666554322111100 111111111000
Q ss_pred ---C---------CCHHHHHHHHHHhHHHHHHHHHcCCCcccCCCCCcc-c-cccCC------ccccceeec--cCCchH
Q 006387 157 ---L---------CDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLH-L-AREGG------HSHHRIVHA--ADMTGR 214 (647)
Q Consensus 157 ---~---------~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~-~-~~~gg------~~~~r~~~~--~~~~g~ 214 (647)
. .++.... ...+..+++.+.|+++.......+. . ..... ......... ....+.
T Consensus 99 ~~~~~~~g~l~~~~~~~~~~----~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (405)
T 2gag_B 99 DFLFSQRGVLNLAHTLGDVR----ESVRRVEANKLNGVDAEWLDPSQVKEACPIINTSDDIRYPVMGATWQPRAGIAKHD 174 (405)
T ss_dssp CCCCBCCCEEEEECSHHHHH----HHHHHHHHHHTBTCCCEEECHHHHHHHCTTSCCSTTSSSCCCEEEEETTCBBCCHH
T ss_pred CcCEecccEEEEEcCHHHHH----HHHHHHHHHHhcCCCceEeCHHHHHhhCCCCcccccccccceeEEEeCCCccCCHH
Confidence 0 1122111 1223345556667654321000000 0 00000 000011111 112356
Q ss_pred HHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 215 EIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 215 ~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
.+...|.+.+.+ .|++++.+++|+++..+ ++ ++.+|.. .+| .++|+.||+|+|+++
T Consensus 175 ~~~~~l~~~~~~-~g~~i~~~~~v~~i~~~-~~---~~~~v~~---~~g---~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 175 HVAWAFARKANE-MGVDIIQNCEVTGFIKD-GE---KVTGVKT---TRG---TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHH-TTCEEECSCCEEEEEES-SS---BEEEEEE---TTC---CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHH-CCCEEEcCCeEEEEEEe-CC---EEEEEEe---CCc---eEECCEEEECCchhH
Confidence 788889999987 49999999999999886 44 5666653 345 589999999999875
No 85
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.28 E-value=2.8e-11 Score=133.14 Aligned_cols=181 Identities=13% Similarity=0.067 Sum_probs=102.5
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCC--CCCHHHHHHHHH-------HhcccC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCP--SDSVESHMQDTI-------VAGAYL 157 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~--~d~~~~~~~~~~-------~~g~~~ 157 (647)
++||+|||||++|+++|+.|+++| +|+||||....+|+|..+.|-+...... .... .+..+.+ +....+
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~~gtS~~s~gli~~g~~~~~~~~~-~l~~~~~~~~~~l~~~~~~l 81 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEHYEF-RLVSEALAEREVLLKMAPHI 81 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSGGGSSCCEECCCGGGGGGTCH-HHHHHHHHHHHHHHHHCTTT
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCCCCccccccccccccchhhhhchH-HHHHHHHHHHHHHHHhCCcc
Confidence 589999999999999999999999 9999999987777776665433321110 0111 1111111 111110
Q ss_pred C---------CHHHHH-HHHHHhHHHHHHHHHcC-CCcccCCC-------CCccccccCCccccceeeccCCchHHHHHH
Q 006387 158 C---------DDETVR-VVCTEGPDRIRELIAIG-ASFDRGED-------GNLHLAREGGHSHHRIVHAADMTGREIERA 219 (647)
Q Consensus 158 ~---------~~~~~~-~~~~~~~~~i~~l~~~G-v~~~~~~~-------g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~ 219 (647)
. +..... ..... ....+...+ ..+-.... ..+.....++..+. .+...+..+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~P~l~~~~~~~~~~~----~g~v~~~~l~~~ 154 (501)
T 2qcu_A 82 AFPMRFRLPHRPHLRPAWMIRI---GLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYS----DCWVDDARLVLA 154 (501)
T ss_dssp EEEEEEEEECCTTTSCHHHHHH---HHHHHHSSSCCSSSCCCEEEECCTTSSBCTTCCEEEEEE----EEEECHHHHHHH
T ss_pred ccccCeEeccCcccchHHHHHH---HHHHHHhcCCcEEECHHHHHHhhcCCCcchhceEEEEee----CCEEcHHHHHHH
Confidence 0 000000 00000 111111121 11110000 00000000111110 111246788899
Q ss_pred HHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006387 220 LLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 220 L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~ 282 (647)
|.+.+.+. |++++++++|+++..++ .+.+|.+.+..+|+...|+|+.||+|||.++.
T Consensus 155 l~~~a~~~-Gv~i~~~~~V~~l~~~~-----~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 155 NAQMVVRK-GGEVLTRTRATSARREN-----GLWIVEAEDIDTGKKYSWQARGLVNATGPWVK 211 (501)
T ss_dssp HHHHHHHT-TCEEECSEEEEEEEEET-----TEEEEEEEETTTCCEEEEEESCEEECCGGGHH
T ss_pred HHHHHHHc-CCEEEcCcEEEEEEEeC-----CEEEEEEEECCCCCEEEEECCEEEECCChhHH
Confidence 99999885 99999999999998763 36788877655677678999999999998864
No 86
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.27 E-value=1.2e-12 Score=142.19 Aligned_cols=34 Identities=18% Similarity=0.159 Sum_probs=30.9
Q ss_pred cCEEEECcchHHHHHHHHHHhc--C-CeEEEEecCCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKH--G-TVAVITKAEPH 122 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~--G-~V~llEk~~~~ 122 (647)
.||+|||||+||++||..|++. | +|+|||+.+..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFI 37 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCcc
Confidence 3899999999999999999998 8 99999998753
No 87
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.27 E-value=2.4e-12 Score=133.73 Aligned_cols=51 Identities=20% Similarity=0.117 Sum_probs=39.8
Q ss_pred cCceEECCC-CCcccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhhc
Q 006387 436 CGGVRAGLQ-GETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 436 ~GGi~vD~~-~~T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
.|.|.||++ ++|++|||||+|||+ +.. ......|...|+.||.++++++..
T Consensus 273 ~G~i~vd~~~~~t~~~~vya~GD~~-~~~-------~~~~~~A~~~g~~aa~~i~~~l~~ 324 (333)
T 1vdc_A 273 DGYVVTKPGTTQTSVPGVFAAGDVQ-DKK-------YRQAITAAGTGCMAALDAEHYLQE 324 (333)
T ss_dssp TSCBCCCTTSCBCSSTTEEECGGGG-CSS-------CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEechhhcccCCCCEEEeeecc-CCC-------chhHHHHHHhHHHHHHHHHHHHHh
Confidence 477899987 589999999999997 221 123556778899999999988754
No 88
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.27 E-value=1.1e-10 Score=133.40 Aligned_cols=177 Identities=14% Similarity=0.209 Sum_probs=99.2
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCC-CCCccccCCCeeeecCCCCCH-HHHH-------HHHHHhccc
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPH-ESNTNYAQGGVSAVLCPSDSV-ESHM-------QDTIVAGAY 156 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~-~G~t~~a~Ggi~~~~~~~d~~-~~~~-------~~~~~~g~~ 156 (647)
..+||+|||||++|+++|+.|+++| +|+||||.... +|+|..+.|.+.......+.. ..+. .+.+..-..
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 350 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPV 350 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSCSTTCCSCEEECCCCCSSCHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcccccCccCCCceecCcCCCCccHHHHHHHHHHHHHHHHHHHCCC
Confidence 3489999999999999999999999 99999997544 455555555444332222211 1111 111111000
Q ss_pred ------------CCCHHHHHHHHHHhHHHHHHHHHcCCCcc---cCCCCCc-c---c-cccCCccccceeeccCCchHHH
Q 006387 157 ------------LCDDETVRVVCTEGPDRIRELIAIGASFD---RGEDGNL-H---L-AREGGHSHHRIVHAADMTGREI 216 (647)
Q Consensus 157 ------------~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~---~~~~g~~-~---~-~~~gg~~~~r~~~~~~~~g~~~ 216 (647)
..+.. ..+.+..+.+.|++.. ....... . + ...++...+.. ....+..+
T Consensus 351 ~~~~~~~g~l~~~~~~~--------~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~---g~v~p~~l 419 (676)
T 3ps9_A 351 KFDHDWCGVTQLGWDEK--------SQHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQG---GWLCPAEL 419 (676)
T ss_dssp CCCEECCCEEEECCSHH--------HHHHHHHHHTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTC---EEECHHHH
T ss_pred CcCcCcCCeeeecCCHH--------HHHHHHHHHhcCCcHHHhhhCCHHHHHHhhCCCccCCcEEecCC---eeeCHHHH
Confidence 00111 1122333344454422 0000000 0 0 00111111110 11235788
Q ss_pred HHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccccCC
Q 006387 217 ERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYP 285 (647)
Q Consensus 217 ~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~~~ 285 (647)
+..|.+.+.+. |++|+++++|++|..+ ++ .+ +|.. .+|. +|+|+.||+|||+++..+.
T Consensus 420 ~~aL~~~a~~~-Gv~i~~~t~V~~l~~~-~~---~v-~V~t---~~G~--~i~Ad~VVlAtG~~s~~l~ 477 (676)
T 3ps9_A 420 TRNVLELAQQQ-GLQIYYQYQLQNFSRK-DD---CW-LLNF---AGDQ--QATHSVVVLANGHQISRFS 477 (676)
T ss_dssp HHHHHHHHHHT-TCEEEESCCEEEEEEE-TT---EE-EEEE---TTSC--EEEESEEEECCGGGGGCST
T ss_pred HHHHHHHHHhC-CCEEEeCCeeeEEEEe-CC---eE-EEEE---CCCC--EEECCEEEECCCcchhccc
Confidence 89999999884 9999999999999987 44 33 3322 3444 4899999999999876443
No 89
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.27 E-value=8.1e-12 Score=131.77 Aligned_cols=35 Identities=23% Similarity=0.309 Sum_probs=30.9
Q ss_pred cccCEEEECcchHHHHHHHHHHhcCCeEEEEecCC
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHGTVAVITKAEP 121 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G~V~llEk~~~ 121 (647)
...||+|||||+||++||..|++.|+|+|+|+.+.
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~g~V~lie~~~~ 41 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQTYEVTVIDKEPV 41 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTTSEEEEECSSSS
T ss_pred CCCcEEEECCcHHHHHHHHHHhhcCCEEEEECCCC
Confidence 35799999999999999999998889999999764
No 90
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=99.26 E-value=5.8e-11 Score=131.81 Aligned_cols=62 Identities=23% Similarity=0.286 Sum_probs=47.1
Q ss_pred HHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcC-eEEECCCccc
Q 006387 219 ALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISK-VTLLASGGAG 281 (647)
Q Consensus 219 ~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak-~VVlAtGg~~ 281 (647)
+++..+.+++|++|++++.|++|+.++++...+++||.+.+ .+|+.++++|+ .||||+|+++
T Consensus 231 ayL~p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~-~~G~~~~v~A~kEVILsAGa~~ 293 (583)
T 3qvp_A 231 EWLLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGT-HKGNTHNVYAKHEVLLAAGSAV 293 (583)
T ss_dssp HHTTTTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEES-STTCEEEEEEEEEEEECSCTTT
T ss_pred HHHHHhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEe-cCCcEEEEEECCEEEEeCCccC
Confidence 33444445679999999999999987421113899999874 35778889995 7999999986
No 91
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.25 E-value=2.2e-10 Score=131.01 Aligned_cols=177 Identities=14% Similarity=0.183 Sum_probs=97.7
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCC-CCCccccCCCeeeecCCCCCHH-HHH-----------HHHHH
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPH-ESNTNYAQGGVSAVLCPSDSVE-SHM-----------QDTIV 152 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~-~G~t~~a~Ggi~~~~~~~d~~~-~~~-----------~~~~~ 152 (647)
.++||+|||||++|+++|+.|+++| +|+||||.... +|+|..+.|.+.......++.. .++ .+...
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~ 342 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQPAQGASGNRQGALYPLLNGKNDALETFFTSAFTFARRQYDQLLE 342 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSSTTCSGGGCSCEEECCCCCSSCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCccccccccccCCEEecCCCCCChHHHHHHHHHHHHHHHHHHHhhh
Confidence 4689999999999999999999999 99999997644 4555555554443333222221 111 11101
Q ss_pred hccc-----------CCCHHHHHHHHHHhHHHHHHHHHcCCCcc---cCCCCCc-c---c-cccCCccccceeeccCCch
Q 006387 153 AGAY-----------LCDDETVRVVCTEGPDRIRELIAIGASFD---RGEDGNL-H---L-AREGGHSHHRIVHAADMTG 213 (647)
Q Consensus 153 ~g~~-----------~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~---~~~~g~~-~---~-~~~gg~~~~r~~~~~~~~g 213 (647)
.+.. ..++. ..+.+.++.+.|++.. ....... . + ...++...+.. ....+
T Consensus 343 ~~~~~~~~~~g~l~~~~~~~--------~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~---g~v~p 411 (689)
T 3pvc_A 343 QGIAFDHQWCGVSQLAFDDK--------SRGKIEKMLHTQWPVEFAEAMSREQLSELAGLDCAHDGIHYPAG---GWLCP 411 (689)
T ss_dssp TTCCCCEECCCEEEECCSHH--------HHHHHHHHTTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTC---EEECH
T ss_pred hccccccccCceEEeccCHH--------HHHHHHHHHhcCCChHHhhccCHHHHHHhcCCCcccceEEecCC---eEECH
Confidence 0000 00111 1112223333444321 0000000 0 0 00011111110 11235
Q ss_pred HHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccccC
Q 006387 214 REIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIY 284 (647)
Q Consensus 214 ~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~~ 284 (647)
..++..|.+.+.+. |++|+++++|++|..++ + .+ +|.. .+|+ ..+.|+.||+|||+++..+
T Consensus 412 ~~l~~aL~~~a~~~-Gv~i~~~t~V~~l~~~~-~---~v-~V~t---~~G~-~~i~Ad~VVlAtG~~s~~l 472 (689)
T 3pvc_A 412 SDLTHALMMLAQQN-GMTCHYQHELQRLKRID-S---QW-QLTF---GQSQ-AAKHHATVILATGHRLPEW 472 (689)
T ss_dssp HHHHHHHHHHHHHT-TCEEEESCCEEEEEECS-S---SE-EEEE---C-CC-CCEEESEEEECCGGGTTCS
T ss_pred HHHHHHHHHHHHhC-CCEEEeCCeEeEEEEeC-C---eE-EEEe---CCCc-EEEECCEEEECCCcchhcc
Confidence 78889999999884 99999999999999874 3 23 3332 3342 1489999999999987544
No 92
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.25 E-value=5.7e-11 Score=129.06 Aligned_cols=152 Identities=17% Similarity=0.258 Sum_probs=93.4
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHHH
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
.++||+|||||+||+++|+.|++.| +|+|+||.+....+.....+++.
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~------------------------------- 53 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVS------------------------------- 53 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEE-------------------------------
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCccccccccc-------------------------------
Confidence 3689999999999999999999999 99999998753221111111110
Q ss_pred HHHHhHHHHHHHHHcCCCcccC------CCCCccccccCCccc--cceeeccCCchHHHHHHHHHHHHcCCCcEEEcceE
Q 006387 166 VCTEGPDRIRELIAIGASFDRG------EDGNLHLAREGGHSH--HRIVHAADMTGREIERALLEAVVSDPNISVFEHHF 237 (647)
Q Consensus 166 ~~~~~~~~i~~l~~~Gv~~~~~------~~g~~~~~~~gg~~~--~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~ 237 (647)
...+.++|+..... ..+.......+.... +...+ ......+...|.+.+.+ .|++++.++.
T Consensus 54 --------~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~r~~l~~~L~~~a~~-~gv~i~~~~~ 122 (453)
T 3atr_A 54 --------KAHFDKLGMPYPKGEELENKINGIKLYSPDMQTVWTVNGEGF--ELNAPLYNQRVLKEAQD-RGVEIWDLTT 122 (453)
T ss_dssp --------HHHHHHTTCCCCCGGGEEEEEEEEEEECTTSSCEEEEEEEEE--EECHHHHHHHHHHHHHH-TTCEEESSEE
T ss_pred --------HHHHHHhcCCCCchHHHHhhhcceEEECCCCceEEeECCCcE--EEcHHHHHHHHHHHHHH-cCCEEEeCcE
Confidence 01122233211000 000000000000000 00000 11235677888888887 5999999999
Q ss_pred EEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccccC
Q 006387 238 AIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIY 284 (647)
Q Consensus 238 v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~~ 284 (647)
|+++..+ ++ ++.||.+.+..+|+..+++|+.||.|+|..+.+.
T Consensus 123 v~~i~~~-~~---~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr 165 (453)
T 3atr_A 123 AMKPIFE-DG---YVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFR 165 (453)
T ss_dssp EEEEEEE-TT---EEEEEEEEETTTTEEEEEECSEEEECCGGGCTTG
T ss_pred EEEEEEE-CC---EEEEEEEEEcCCCceEEEEcCEEEECcCCchhhH
Confidence 9999886 44 6888877653257766899999999999988643
No 93
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.24 E-value=2.9e-11 Score=129.86 Aligned_cols=52 Identities=21% Similarity=0.239 Sum_probs=38.6
Q ss_pred CceEECCCCCcccCceeecccccCCCCC----CCCccchhhhHHHHHHHHHHHHHHHH
Q 006387 437 GGVRAGLQGETNVRGLYVAGEVACTGLH----GANRLASNSLLEALVFARRAVQPSID 490 (647)
Q Consensus 437 GGi~vD~~~~T~ipGLyAaGe~a~~g~~----Ga~rl~g~sl~~a~v~G~~Ag~~a~~ 490 (647)
+||.||++++|++||+||+|||+ ...+ | .++--.....|...|+.||++++.
T Consensus 265 ~gi~vd~~~~t~~~~iyA~GD~a-~~~~~~~~g-~~~~~~~~~~A~~qg~~aa~~i~g 320 (415)
T 3lxd_A 265 NGVDVDEFCRTSLTDVYAIGDCA-AHANDFADG-AVIRLESVQNANDMATAAAKDICG 320 (415)
T ss_dssp SSEECCTTCBCSSTTEEECGGGE-EEECGGGTT-CEECCCSHHHHHHHHHHHHHHHTT
T ss_pred CCEEECCCCCcCCCCEEEEEeee-eecCcccCC-cceeechHHHHHHHHHHHHHHhcC
Confidence 57999999999999999999998 2322 2 122223457788889999888764
No 94
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.23 E-value=2.1e-10 Score=126.60 Aligned_cols=51 Identities=22% Similarity=0.248 Sum_probs=41.3
Q ss_pred cCceEECCCCCcccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhhc
Q 006387 436 CGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 436 ~GGi~vD~~~~T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
.|.|.||++++|++||+||+|||+ +..+ .....|+-.|+.||.++.+++..
T Consensus 467 ~G~I~Vd~~~~ts~p~VfA~GD~~-~~~~-------~~~~~A~~~g~~aa~~i~~~L~~ 517 (521)
T 1hyu_A 467 MGEIIIDAKCETSVKGVFAAGDCT-TVPY-------KQIIIATGEGAKASLSAFDYLIR 517 (521)
T ss_dssp TSCBCCCTTCBCSSTTEEECSTTB-CCSS-------CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEeCCCCCCCCCCEEEeeccc-CCCc-------ceeeehHHhHHHHHHHHHHHHHh
Confidence 488999999999999999999997 2221 24566788899999999988743
No 95
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=99.22 E-value=4.3e-11 Score=132.96 Aligned_cols=54 Identities=19% Similarity=0.389 Sum_probs=44.4
Q ss_pred HcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEc-CeEEECCCccc
Q 006387 225 VSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFIS-KVTLLASGGAG 281 (647)
Q Consensus 225 ~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~A-k~VVlAtGg~~ 281 (647)
.+++|++|++++.|++|+.++++ .+++||.+.+. +|+.++++| |.||||+|+++
T Consensus 216 ~~r~Nl~v~~~a~v~ri~~~~~~--~~a~GV~~~~~-~g~~~~v~A~keVILsaGa~~ 270 (577)
T 3q9t_A 216 KNKPNITIVPEVHSKRLIINEAD--RTCKGVTVVTA-AGNELNFFADREVILSQGVFE 270 (577)
T ss_dssp SSCTTEEEECSEEEEEEEEETTT--TEEEEEEEEET-TSCEEEEEEEEEEEECSHHHH
T ss_pred hcCCCeEEEcCcEEEEEEEeCCC--CEEEEEEEEeC-CCcEEEEEeeeEEEEcccccC
Confidence 44579999999999999997422 38999998763 477788999 78999999885
No 96
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.22 E-value=4e-11 Score=126.95 Aligned_cols=49 Identities=24% Similarity=0.337 Sum_probs=42.3
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCee
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVS 134 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~ 134 (647)
+.++||+|||||++|+++|+.|+++| +|+|||+....+|+|..+.|.+.
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~~~g~s~~~~g~~~ 64 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGRTTSAAAGMLG 64 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTTTHHHHCCCBCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCcccchhcCceec
Confidence 45799999999999999999999999 99999999887777766655444
No 97
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.22 E-value=4.4e-10 Score=105.66 Aligned_cols=107 Identities=20% Similarity=0.191 Sum_probs=72.5
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHHHHH
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
+||+|||||++|+.+|..|++.| +|+|+|+.+.....+.. +.+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~----------------------------~~~-------- 45 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSR----------------------------VPN-------- 45 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSC----------------------------CCC--------
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchh----------------------------hhc--------
Confidence 79999999999999999999999 99999997621111000 000
Q ss_pred HHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006387 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
..++ +....+..+...+.+.+++. |++++.+ +|+++..++++
T Consensus 46 -----------~~~~-------------------------~~~~~~~~~~~~l~~~~~~~-gv~v~~~-~v~~i~~~~~~ 87 (180)
T 2ywl_A 46 -----------YPGL-------------------------LDEPSGEELLRRLEAHARRY-GAEVRPG-VVKGVRDMGGV 87 (180)
T ss_dssp -----------STTC-------------------------TTCCCHHHHHHHHHHHHHHT-TCEEEEC-CCCEEEECSSS
T ss_pred -----------cCCC-------------------------cCCCCHHHHHHHHHHHHHHc-CCEEEeC-EEEEEEEcCCE
Confidence 0000 00113456777777888774 9999999 99999875332
Q ss_pred CCCeEEEEEEEecCCCeEEEEEcCeEEECCCcc
Q 006387 248 PDAVCHGVDTLNVETQEVVRFISKVTLLASGGA 280 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~ 280 (647)
+.+ ...+| .+.|+.||+|+|..
T Consensus 88 -------~~v-~~~~g---~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 88 -------FEV-ETEEG---VEKAERLLLCTHKD 109 (180)
T ss_dssp -------EEE-ECSSC---EEEEEEEEECCTTC
T ss_pred -------EEE-EECCC---EEEECEEEECCCCC
Confidence 222 22345 58999999999954
No 98
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.21 E-value=5.7e-11 Score=122.49 Aligned_cols=51 Identities=14% Similarity=0.136 Sum_probs=40.3
Q ss_pred cCceEECCCC-----CcccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhhc
Q 006387 436 CGGVRAGLQG-----ETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 436 ~GGi~vD~~~-----~T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
.|.|.||+++ +|++||+||+|||+ +... .....|+..|+.||.++..++.+
T Consensus 260 ~G~i~vd~~~~~~~~~t~~~~vya~GD~~-~~~~-------~~~~~A~~~g~~aa~~i~~~l~~ 315 (320)
T 1trb_A 260 NGYIKVQSGIHGNATQTSIPGVFAAGDVM-DHIY-------RQAITSAGTGCMAALDAERYLDG 315 (320)
T ss_dssp TTEECCCCSSSSCTTBCSSTTEEECGGGG-CSSS-------CCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CceEEECCCcccccccCCCCCEEEccccc-CCcc-------hhhhhhhccHHHHHHHHHHHHHh
Confidence 5778999986 89999999999997 2211 23566888899999999988754
No 99
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.20 E-value=4e-10 Score=133.00 Aligned_cols=38 Identities=29% Similarity=0.413 Sum_probs=34.6
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G 124 (647)
..+||+|||+|+||++||+.|++.| +|+|||+.+..+|
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG 165 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGG 165 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSG
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCc
Confidence 4689999999999999999999999 9999999876654
No 100
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.20 E-value=3e-11 Score=128.31 Aligned_cols=33 Identities=30% Similarity=0.403 Sum_probs=30.0
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC---CeEEEEecC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG---TVAVITKAE 120 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G---~V~llEk~~ 120 (647)
.+||+|||||+||++||+.|++.| +|+|+|+..
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 589999999999999999999998 489999864
No 101
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.20 E-value=5.6e-10 Score=120.58 Aligned_cols=63 Identities=13% Similarity=0.155 Sum_probs=51.0
Q ss_pred chHHHHHHHHHHHHcCCCcEEEcce---EEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccccC
Q 006387 212 TGREIERALLEAVVSDPNISVFEHH---FAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIY 284 (647)
Q Consensus 212 ~g~~~~~~L~~~~~~~~gv~i~~~~---~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~~ 284 (647)
....++..|.+.+++. |++|++++ +|++|..+ ++ ++.||.. .+|+ +|+|+.||+|||+++...
T Consensus 159 ~~~~~~~~L~~~a~~~-Gv~i~~~t~~~~V~~i~~~-~~---~v~gV~t---~~G~--~i~Ad~VV~AtG~~s~~l 224 (438)
T 3dje_A 159 HARNALVAAAREAQRM-GVKFVTGTPQGRVVTLIFE-NN---DVKGAVT---ADGK--IWRAERTFLCAGASAGQF 224 (438)
T ss_dssp CHHHHHHHHHHHHHHT-TCEEEESTTTTCEEEEEEE-TT---EEEEEEE---TTTE--EEECSEEEECCGGGGGGT
T ss_pred cHHHHHHHHHHHHHhc-CCEEEeCCcCceEEEEEec-CC---eEEEEEE---CCCC--EEECCEEEECCCCChhhh
Confidence 3567888999999874 99999999 99999986 44 6877765 4564 589999999999988543
No 102
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.19 E-value=3e-11 Score=127.66 Aligned_cols=175 Identities=17% Similarity=0.145 Sum_probs=97.8
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecC-CCCCCccccCCCeeeecCCCCCHHHHHHH---HHHhc-ccC--
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE-PHESNTNYAQGGVSAVLCPSDSVESHMQD---TIVAG-AYL-- 157 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~-~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~---~~~~g-~~~-- 157 (647)
+.++||+|||||++|+++|++|+ +| +|+||||.. ..+++|..+.|.+...... +....+... .+..- ..+
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~g~~as~~~~g~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~ 84 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQPGYHSTGRSAAHYTVAYGT-PQVRALTAASRAFFDNPPAGFCE 84 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSSTTSSGGGSCCCEECSSSSC-HHHHHHHHHHHHHHHSCCTTSCS
T ss_pred CCcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCccccccccccceeecccCC-HHHHHHHHHHHHHHHHhhhhhCC
Confidence 45789999999999999999999 59 999999996 4445555555444332221 111111111 11100 000
Q ss_pred ------------CCHHHHHHHHHHhHHHHHHHHHcCCCcccCCCCC-------cccc-ccCCccccceeeccCCchHHHH
Q 006387 158 ------------CDDETVRVVCTEGPDRIRELIAIGASFDRGEDGN-------LHLA-REGGHSHHRIVHAADMTGREIE 217 (647)
Q Consensus 158 ------------~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~g~-------~~~~-~~gg~~~~r~~~~~~~~g~~~~ 217 (647)
...+. .+.....++++.+.|+++....... +... ..++...+.. .......++
T Consensus 85 ~~~~~~~g~l~~~~~~~----~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~l~~~~~~~~~~~~~~---~~~~~~~~~ 157 (381)
T 3nyc_A 85 HPLLSPRPEMVVDFSDD----PEELRRQYESGKALVPQMRLLDAEQACSIVPVLRRDKVFGATYDPTG---ADIDTDALH 157 (381)
T ss_dssp SCSEEECCEEEECSSCC----HHHHHHHHHHHHHHCTTCEEECHHHHHHHSTTBCGGGCCCEEEETTC---EEECHHHHH
T ss_pred cccccccceEEEechHH----HHHHHHHHHHHHHcCCCcEEeCHHHHHHhCCCcccccceEEEEcCCC---ceECHHHHH
Confidence 00000 0112233444555665543210000 0000 0011111100 112356788
Q ss_pred HHHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 218 RALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 218 ~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
..|.+.+++. |++|+++++|++|..+ ++ . ++|. +.+| .|+|+.||+|||+++
T Consensus 158 ~~l~~~a~~~-Gv~i~~~~~V~~i~~~-~~---~-~~V~---t~~g---~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 158 QGYLRGIRRN-QGQVLCNHEALEIRRV-DG---A-WEVR---CDAG---SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHT-TCEEESSCCCCEEEEE-TT---E-EEEE---CSSE---EEEESEEEECCGGGH
T ss_pred HHHHHHHHHC-CCEEEcCCEEEEEEEe-CC---e-EEEE---eCCC---EEEcCEEEECCChhH
Confidence 9999999885 9999999999999986 44 3 3332 2344 689999999999876
No 103
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.18 E-value=9.6e-11 Score=124.61 Aligned_cols=144 Identities=21% Similarity=0.238 Sum_probs=90.9
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHHH
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
.++||+|||||++|+++|+.|++.| +|+|+|+....++.. ...+++.
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~-~~~~~~~------------------------------- 50 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPV-RCGEGLS------------------------------- 50 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSC-CSCCEEE-------------------------------
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCc-ccccccC-------------------------------
Confidence 4689999999999999999999999 999999988654322 2222221
Q ss_pred HHHHhHHHHHHHHHcCCCccc-------------CCCCCc--cccccCCccccceeeccCCchHHHHHHHHHHHHcCCCc
Q 006387 166 VCTEGPDRIRELIAIGASFDR-------------GEDGNL--HLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNI 230 (647)
Q Consensus 166 ~~~~~~~~i~~l~~~Gv~~~~-------------~~~g~~--~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv 230 (647)
.+.++++|+.... ..++.. .+.... ...+... ......+...|.+.+.+ .|+
T Consensus 51 --------~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~l~~~L~~~~~~-~gv 117 (397)
T 3cgv_A 51 --------KGILNEADIKADRSFIANEVKGARIYGPSEKRPIILQSEK-AGNEVGY---VLERDKFDKHLAALAAK-AGA 117 (397)
T ss_dssp --------THHHHHTTCCCCTTTEEEEESEEEEECTTCSSCEEEC------CCCEE---EECHHHHHHHHHHHHHH-HTC
T ss_pred --------HHHHHHcCCCCChHHhhhhcceEEEEcCCCCEEEEEeccc-cCCceeE---EEeHHHHHHHHHHHHHh-CCC
Confidence 0112233331110 011111 000000 0000000 01235677888888887 599
Q ss_pred EEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 231 SVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 231 ~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
+++.+++|+++..+ ++ ++.||.+.+ .++..+++|+.||.|+|..+
T Consensus 118 ~i~~~~~v~~i~~~-~~---~v~gv~~~~--~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 118 DVWVKSPALGVIKE-NG---KVAGAKIRH--NNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EEESSCCEEEEEEE-TT---EEEEEEEEE--TTEEEEEEEEEEEECCCTTC
T ss_pred EEEECCEEEEEEEe-CC---EEEEEEEEE--CCeEEEEEcCEEEECCCcch
Confidence 99999999999887 45 688887764 24455799999999999776
No 104
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.17 E-value=1.8e-10 Score=124.86 Aligned_cols=49 Identities=24% Similarity=0.445 Sum_probs=40.6
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC--CeEEEEe-cCCCCCCccccCCCeee
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG--TVAVITK-AEPHESNTNYAQGGVSA 135 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk-~~~~~G~t~~a~Ggi~~ 135 (647)
.++||+|||||++|+++|+.|+++| +|+|||+ .....|+|..+.|.+..
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~~~g~S~~~~g~i~~ 73 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAPGSGDSGRSMAAFRT 73 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSSTTCSGGGSSCCEEEC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCCCCCcccCCCcEecc
Confidence 5799999999999999999999998 8999999 66666666666554443
No 105
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.17 E-value=3.1e-11 Score=132.46 Aligned_cols=35 Identities=14% Similarity=0.183 Sum_probs=31.1
Q ss_pred ccCEEEECcchHHHHHHHHHHhc---C-CeEEEEecCCC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKH---G-TVAVITKAEPH 122 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~---G-~V~llEk~~~~ 122 (647)
++||+|||||+||++||..|++. + +|+|||+....
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~ 73 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNI 73 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCC
Confidence 58999999999999999999986 3 89999997643
No 106
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.16 E-value=2.9e-10 Score=121.69 Aligned_cols=35 Identities=20% Similarity=0.421 Sum_probs=31.6
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-C--eEEEEecCC
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-T--VAVITKAEP 121 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~--V~llEk~~~ 121 (647)
..+||+|||||+||++||..|++.| + |+|+|+.+.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~ 43 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAE 43 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCS
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCC
Confidence 4589999999999999999999998 4 999999764
No 107
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.16 E-value=3.3e-10 Score=120.12 Aligned_cols=178 Identities=13% Similarity=0.135 Sum_probs=96.4
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCC--CCccccCCCeeeecCCCCCHHH-------HHHHHHHh-ccc
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHE--SNTNYAQGGVSAVLCPSDSVES-------HMQDTIVA-GAY 156 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~--G~t~~a~Ggi~~~~~~~d~~~~-------~~~~~~~~-g~~ 156 (647)
++||+|||||++|+++|+.|+++| +|+|||+....+ |+|..+.+.+............ .+.+.... +..
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 82 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLALRSQELWYELEKETHHK 82 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSCSSSSSCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHHHCSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHhCCc
Confidence 589999999999999999999999 999999988766 5554333222211111111111 11111111 100
Q ss_pred C---------CCHHHHHHHHHHhHHHHHHHHHcCCCcccCCCCCccccccCCc----cccceeecc--CCchHHHHHHHH
Q 006387 157 L---------CDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGH----SHHRIVHAA--DMTGREIERALL 221 (647)
Q Consensus 157 ~---------~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~----~~~r~~~~~--~~~g~~~~~~L~ 221 (647)
. ...+. .+.....++++...|+++.......+. ...... .....+... -.....+...|.
T Consensus 83 ~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~l~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 157 (389)
T 2gf3_A 83 IFTKTGVLVFGPKGE----SAFVAETMEAAKEHSLTVDLLEGDEIN-KRWPGITVPENYNAIFEPNSGVLFSENCIRAYR 157 (389)
T ss_dssp CEECCCEEEEEETTC----CHHHHHHHHHHHHTTCCCEEEETHHHH-HHSTTCCCCTTEEEEEETTCEEEEHHHHHHHHH
T ss_pred ceeecceEEEcCCCc----hHHHHHHHHHHHHcCCCcEEcCHHHHH-HhCCCcccCCCceEEEeCCCcEEeHHHHHHHHH
Confidence 0 00000 001122334555667654311000000 000000 000011111 113467888999
Q ss_pred HHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006387 222 EAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 222 ~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~ 282 (647)
+.+++. |++++++++|+++..++++ + .+ . +.+| .++|+.||+|+|.++.
T Consensus 158 ~~~~~~-Gv~i~~~~~v~~i~~~~~~----~-~v--~-~~~g---~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 158 ELAEAR-GAKVLTHTRVEDFDISPDS----V-KI--E-TANG---SYTADKLIVSMGAWNS 206 (389)
T ss_dssp HHHHHT-TCEEECSCCEEEEEECSSC----E-EE--E-ETTE---EEEEEEEEECCGGGHH
T ss_pred HHHHHC-CCEEEcCcEEEEEEecCCe----E-EE--E-eCCC---EEEeCEEEEecCccHH
Confidence 999885 9999999999999876332 2 23 2 2333 5899999999998763
No 108
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.15 E-value=1.9e-11 Score=127.22 Aligned_cols=52 Identities=15% Similarity=0.075 Sum_probs=39.4
Q ss_pred cCceEECCC-CCcccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhhcc
Q 006387 436 CGGVRAGLQ-GETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKST 495 (647)
Q Consensus 436 ~GGi~vD~~-~~T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~~ 495 (647)
.|.|.||++ ++|++||+||+|||+ +... .....|...|+.||.++..++...
T Consensus 266 ~G~i~vd~~~~~t~~~~iya~GD~~-~~~~-------~~~~~A~~~g~~aA~~i~~~l~~~ 318 (335)
T 2a87_A 266 DGYVLVQGRTTSTSLPGVFAAGDLV-DRTY-------RQAVTAAGSGCAAAIDAERWLAEH 318 (335)
T ss_dssp TSCBCCSTTSSBCSSTTEEECGGGT-CCSC-------CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccEEeCCCCCccCCCCEEEeeecC-CccH-------HHHHHHHHhHHHHHHHHHHHhhcC
Confidence 477899986 589999999999997 2211 134567778999999999887543
No 109
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.15 E-value=1.7e-10 Score=129.09 Aligned_cols=157 Identities=21% Similarity=0.266 Sum_probs=94.3
Q ss_pred ccccCEEEECcchHHHHHHHHHHhc------C-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCC
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKH------G-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLC 158 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~------G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~ 158 (647)
..++||||||||+||++||+.|++. | +|+||||....++.. .. |+.. .
T Consensus 33 ~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~-~~-g~~l---~-------------------- 87 (584)
T 2gmh_A 33 AEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHT-LS-GACL---D-------------------- 87 (584)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTC-CC-CCEE---C--------------------
T ss_pred ccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCcc-cc-cccc---C--------------------
Confidence 4579999999999999999999999 9 999999987655432 11 2211 1
Q ss_pred CHHHHHHHHHHhHHHHHHHHHcCCCcccC----------CCCCccccccCC--ccccceeeccCCchHHHHHHHHHHHHc
Q 006387 159 DDETVRVVCTEGPDRIRELIAIGASFDRG----------EDGNLHLAREGG--HSHHRIVHAADMTGREIERALLEAVVS 226 (647)
Q Consensus 159 ~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~----------~~g~~~~~~~gg--~~~~r~~~~~~~~g~~~~~~L~~~~~~ 226 (647)
+..++.+ +..+.+.|.++... ..+.+.+..... ...... + ......+...|.+.+++
T Consensus 88 -~~~l~~l-------l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~v~r~~l~~~L~~~a~~ 156 (584)
T 2gmh_A 88 -PRAFEEL-------FPDWKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGN-Y--VVRLGHLVSWMGEQAEA 156 (584)
T ss_dssp -THHHHHH-------CTTHHHHTCCCCEECCEEEEEEECSSCEEECCCCTTSTTCCTTC-E--ECCHHHHHHHHHHHHHH
T ss_pred -HHHHHHH-------HHHHHhcCCceeeeechhheeeeccCCCccccccCccccccCCC-E--EEeHHHHHHHHHHHHHH
Confidence 0111111 01112223332210 001000000000 000000 0 01245778889999987
Q ss_pred CCCcEEEcceEEEEEEecCCCCCCeEEEEEEEec---CCCeE-------EEEEcCeEEECCCcccc
Q 006387 227 DPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNV---ETQEV-------VRFISKVTLLASGGAGH 282 (647)
Q Consensus 227 ~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~---~~g~~-------~~i~Ak~VVlAtGg~~~ 282 (647)
. ||+|+.++.|+++..++++ +|.||.+.+. .+|+. ..++||.||+|+|+.+.
T Consensus 157 ~-Gv~i~~g~~v~~l~~~~~g---~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 157 L-GVEVYPGYAAAEILFHEDG---SVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp T-TCEEETTCCEEEEEECTTS---SEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred c-CCEEEcCCEEEEEEEcCCC---CEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCch
Confidence 5 9999999999999987555 6888876431 23432 36999999999999875
No 110
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.14 E-value=5.1e-10 Score=123.47 Aligned_cols=160 Identities=23% Similarity=0.259 Sum_probs=94.9
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHH
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVR 164 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~ 164 (647)
+.++||+|||||++|+++|+.|++.| +|+|||+........ | ... . +....
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~----g-~~~------~-----------------~~~~~ 56 (512)
T 3e1t_A 5 PEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQI----G-ESL------L-----------------PATVH 56 (512)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCS----C-CBC------C-----------------HHHHT
T ss_pred CccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCC----C-ccc------C-----------------cchHH
Confidence 34699999999999999999999999 999999987543211 1 000 0 00000
Q ss_pred HHHHHhHHHHHHHHHcCCCcccC------CCCC---ccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcc
Q 006387 165 VVCTEGPDRIRELIAIGASFDRG------EDGN---LHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEH 235 (647)
Q Consensus 165 ~~~~~~~~~i~~l~~~Gv~~~~~------~~g~---~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~ 235 (647)
.+.+. ....+.+...++..... .... +.+........... .......+...|.+.+.+ .|++++.+
T Consensus 57 ~~l~~-lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~r~~l~~~L~~~a~~-~Gv~i~~~ 131 (512)
T 3e1t_A 57 GICAM-LGLTDEMKRAGFPIKRGGTFRWGKEPEPWTFGFTRHPDDPYGFA---YQVERARFDDMLLRNSER-KGVDVRER 131 (512)
T ss_dssp THHHH-TTCHHHHHTTTCCEECEEEEECSSCSSCEEEESSSSSSSTTCCE---EBCCHHHHHHHHHHHHHH-TTCEEESS
T ss_pred HHHHH-hCcHHHHHHcCCccccCceEEecCCccccccccccCCCCCccee---eEecHHHHHHHHHHHHHh-CCCEEEcC
Confidence 00000 00112233333332210 0000 00000000000000 012345677888888887 59999999
Q ss_pred eEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccccc
Q 006387 236 HFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHI 283 (647)
Q Consensus 236 ~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~ 283 (647)
++|+++..+ ++ ++.||.+.+ .+|+..+++|+.||+|+|..+.+
T Consensus 132 ~~V~~v~~~-~~---~v~gv~~~~-~dG~~~~i~ad~VI~AdG~~S~v 174 (512)
T 3e1t_A 132 HEVIDVLFE-GE---RAVGVRYRN-TEGVELMAHARFIVDASGNRTRV 174 (512)
T ss_dssp CEEEEEEEE-TT---EEEEEEEEC-SSSCEEEEEEEEEEECCCTTCSS
T ss_pred CEEEEEEEE-CC---EEEEEEEEe-CCCCEEEEEcCEEEECCCcchHH
Confidence 999999986 44 688887764 45766689999999999988754
No 111
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.14 E-value=3.7e-10 Score=123.87 Aligned_cols=117 Identities=20% Similarity=0.237 Sum_probs=77.2
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcCCeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHHH
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHGTVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
...+||+|||||+||++||+.|++.-+|+|+|+.+..+|........ .
T Consensus 106 ~~~~dVvIIGgG~aGl~aA~~L~~~~~V~vie~~~~~GG~~~~~~~~---~----------------------------- 153 (493)
T 1y56_A 106 RVVVDVAIIGGGPAGIGAALELQQYLTVALIEERGWLGGDMWLKGIK---Q----------------------------- 153 (493)
T ss_dssp EEEESCCEECCSHHHHHHHHHHTTTCCEEEECTTSSSSCSGGGTCSE---E-----------------------------
T ss_pred cccCCEEEECccHHHHHHHHHHHhcCCEEEEeCCCCCCCeeeccccc---c-----------------------------
Confidence 34689999999999999999998766899999988765543221000 0
Q ss_pred HHHHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEEecC
Q 006387 166 VCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTL 245 (647)
Q Consensus 166 ~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~ 245 (647)
.|++ ..+..+...+.+.+ + .+++++.++.++++..+.
T Consensus 154 --------------~g~~---------------------------~~~~~~~~~l~~~l-~-~~v~~~~~~~v~~i~~~~ 190 (493)
T 1y56_A 154 --------------EGFN---------------------------KDSRKVVEELVGKL-N-ENTKIYLETSALGVFDKG 190 (493)
T ss_dssp --------------TTTT---------------------------EEHHHHHHHHHHTC-C-TTEEEETTEEECCCEECS
T ss_pred --------------CCCC---------------------------CCHHHHHHHHHHHH-h-cCCEEEcCCEEEEEEcCC
Confidence 0000 01233444455555 3 599999999999887653
Q ss_pred CCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccccC
Q 006387 246 DGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIY 284 (647)
Q Consensus 246 ~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~~ 284 (647)
+ .+. +.....++...+.++.+|+|||......
T Consensus 191 ~----~~~---~~~~~~~~~~~~~~d~lvlAtGa~~~~~ 222 (493)
T 1y56_A 191 E----YFL---VPVVRGDKLIEILAKRVVLATGAIDSTM 222 (493)
T ss_dssp S----SEE---EEEEETTEEEEEEESCEEECCCEEECCC
T ss_pred c----EEE---EEEecCCeEEEEECCEEEECCCCCccCC
Confidence 2 222 1111346666799999999999876543
No 112
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.13 E-value=2.2e-10 Score=122.77 Aligned_cols=52 Identities=23% Similarity=0.303 Sum_probs=37.7
Q ss_pred CceEECCCCCcccCceeecccccCCCCC--CCCccchhhhHHHHHHHHHHHHHHHH
Q 006387 437 GGVRAGLQGETNVRGLYVAGEVACTGLH--GANRLASNSLLEALVFARRAVQPSID 490 (647)
Q Consensus 437 GGi~vD~~~~T~ipGLyAaGe~a~~g~~--Ga~rl~g~sl~~a~v~G~~Ag~~a~~ 490 (647)
+||.||++++|++|++||+|||+ ...+ |. ++.-.....|...|+.||++++.
T Consensus 255 ~gi~vd~~~~t~~~~IyA~GD~a-~~~~~~g~-~~~~~~~~~A~~qg~~aa~~i~g 308 (410)
T 3ef6_A 255 RGVIVDHCGATLAKGVFAVGDVA-SWPLRAGG-RRSLETYMNAQRQAAAVAAAILG 308 (410)
T ss_dssp SSEECCTTSBCSSTTEEECGGGE-EEEBTTSS-EECCCCHHHHHHHHHHHHHHHTT
T ss_pred CeEEEccCeeECCCCEEEEEcce-eccCCCCC-eeeechHHHHHHHHHHHHHHHcC
Confidence 67999999999999999999997 2221 11 11112356788889999888764
No 113
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.12 E-value=1.6e-10 Score=123.62 Aligned_cols=53 Identities=17% Similarity=0.007 Sum_probs=38.1
Q ss_pred CceEECCCCCcccCceeecccccCCCCC--CCCccchhhhHHHHHHHHHHHHHHHH
Q 006387 437 GGVRAGLQGETNVRGLYVAGEVACTGLH--GANRLASNSLLEALVFARRAVQPSID 490 (647)
Q Consensus 437 GGi~vD~~~~T~ipGLyAaGe~a~~g~~--Ga~rl~g~sl~~a~v~G~~Ag~~a~~ 490 (647)
+||.||++++|++||+||+|||+. ..+ ...++.-.+...|...|+.||++++.
T Consensus 255 ~Gi~vd~~~~t~~~~iya~GD~a~-~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 309 (404)
T 3fg2_P 255 AGIIVDQQLLTSDPHISAIGDCAL-FESVRFGETMRVESVQNATDQARCVAARLTG 309 (404)
T ss_dssp SSEEECTTSBCSSTTEEECGGGEE-EEETTTTEEECCCSHHHHHHHHHHHHHHTTT
T ss_pred CCEEECCCcccCCCCEEEeeccee-ecCccCCceeeehHHHHHHHHHHHHHHHhCC
Confidence 569999999999999999999982 221 01122222467788889988887764
No 114
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.12 E-value=6.9e-10 Score=118.17 Aligned_cols=179 Identities=14% Similarity=0.119 Sum_probs=92.0
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCC--CCccccCCCeeeecCCCCCHHHH-------HHHHHHh-ccc
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHE--SNTNYAQGGVSAVLCPSDSVESH-------MQDTIVA-GAY 156 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~--G~t~~a~Ggi~~~~~~~d~~~~~-------~~~~~~~-g~~ 156 (647)
++||+|||||++|+++|+.|+++| +|+||||....+ |+|..+.+.+..... ....... +.+.... +..
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~~~~gas~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFNENGGTSGAERHWRLQYT-QEDLFRLTLETLPLWRALESRCERR 82 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTCSSSSCCSSEEEECSCCS-SHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCcCeEEEeccC-cchhhhHHHHHHHHHHHHHHHhCcc
Confidence 589999999999999999999999 999999988754 444322211111111 1000000 1111000 000
Q ss_pred C---------CCHHHHHHHHHHhHHHHHHHHHcCCCcccCCCCCccccccCCcc---ccceee-cc--CCchHHHHHHHH
Q 006387 157 L---------CDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHS---HHRIVH-AA--DMTGREIERALL 221 (647)
Q Consensus 157 ~---------~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~---~~r~~~-~~--~~~g~~~~~~L~ 221 (647)
. ...+. ....+...+..+++.+.|+++.......+. ....... ....++ .. ......+...|.
T Consensus 83 ~~~~~g~l~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~-~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~l~ 160 (397)
T 2oln_A 83 LIHEIGSLWFGDTDV-VTNEGQISGTAAMMDKLSVRYEWLKATDIE-RRFGFRGLPRDYEGFLQPDGGTIDVRGTLAALF 160 (397)
T ss_dssp CEECCCEEEEECSSC-CBTTBCHHHHHHHHHHTTCCCEEEEHHHHH-HHHCCCSCCTTCEEEEETTCEEEEHHHHHHHHH
T ss_pred HHHHCCcEEEcCCCc-cchhHHHHHHHHHHHHcCCCceecCHHHHH-hhCcCccCCCceeEEEcCCCCEEcHHHHHHHHH
Confidence 0 00000 000011122334455556543210000000 0000000 000011 11 112456788888
Q ss_pred HHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 222 EAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 222 ~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
+.+.+. |++++++++|++|..+ ++ .+ .+. +.++ .|+|+.||+|+|+++
T Consensus 161 ~~a~~~-Gv~i~~~~~V~~i~~~-~~---~v---~v~-t~~g---~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 161 TLAQAA-GATLRAGETVTELVPD-AD---GV---SVT-TDRG---TYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHT-TCEEEESCCEEEEEEE-TT---EE---EEE-ESSC---EEEEEEEEECCGGGH
T ss_pred HHHHHc-CCEEECCCEEEEEEEc-CC---eE---EEE-ECCC---EEEcCEEEEcCCcCh
Confidence 888874 9999999999999876 33 23 232 2334 589999999999875
No 115
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=99.12 E-value=9.7e-11 Score=129.81 Aligned_cols=60 Identities=22% Similarity=0.275 Sum_probs=46.6
Q ss_pred HHHHHHHHcCCCcEEEcceEEEEEEec---CC-CCCCeEEEEEEEecCCC-eEEEEEc-CeEEECCCccc
Q 006387 218 RALLEAVVSDPNISVFEHHFAIDLLTT---LD-GPDAVCHGVDTLNVETQ-EVVRFIS-KVTLLASGGAG 281 (647)
Q Consensus 218 ~~L~~~~~~~~gv~i~~~~~v~~l~~~---~~-g~~~~v~Gv~~~~~~~g-~~~~i~A-k~VVlAtGg~~ 281 (647)
.+++..+.+++|++|++++.|++|+.+ ++ + +++||.+.+. +| +.++++| |.||||+|++.
T Consensus 211 ~ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~---rA~GVe~~~~-~g~~~~~v~A~kEVILsAGai~ 276 (566)
T 3fim_B 211 TAYLRPAQSRPNLSVLINAQVTKLVNSGTTNGLP---AFRCVEYAEQ-EGAPTTTVCAKKEVVLSAGSVG 276 (566)
T ss_dssp HHTHHHHTTCTTEEEESSCEEEEEECCEEETTEE---ECCEEEEESS-TTSCCEEEEEEEEEEECCHHHH
T ss_pred HHHhhhhccCCCeEEECCCEEEEEEeecCCCCCC---EEEEEEEEEC-CCceEEEEEeeeEEEEecCCcC
Confidence 344455556689999999999999986 22 3 8999998753 34 6678999 88999999875
No 116
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.12 E-value=1.3e-10 Score=125.29 Aligned_cols=34 Identities=21% Similarity=0.427 Sum_probs=30.8
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC---CeEEEEecCC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG---TVAVITKAEP 121 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G---~V~llEk~~~ 121 (647)
.+||+|||||+||++||..|++.| +|+|+|+.+.
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCS
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCC
Confidence 589999999999999999999998 4999998753
No 117
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.10 E-value=6.7e-10 Score=117.04 Aligned_cols=176 Identities=9% Similarity=0.054 Sum_probs=93.9
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccc-cCCCeeee-cCCCCCHH-------HHHHHHHHhcc--
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNY-AQGGVSAV-LCPSDSVE-------SHMQDTIVAGA-- 155 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~-a~Ggi~~~-~~~~d~~~-------~~~~~~~~~g~-- 155 (647)
++||+|||||++|+++|+.|+++| +|+|||+....++.+.. ..+++... ........ ..+.+....+.
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 81 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVPLVLRAQMLWDELSRHNEDD 81 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSSSSCCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHTTCSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCccceeeeccCCCchHHHHHHHHHHHHHHHHHhCCCc
Confidence 489999999999999999999999 99999998876543322 11112111 11111111 11111110000
Q ss_pred cC-----------CCHHHHHHHHHHhHHHHHHHHHcCCCcccCCCCCccccccCCc----cccceeecc--CCchHHHHH
Q 006387 156 YL-----------CDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGH----SHHRIVHAA--DMTGREIER 218 (647)
Q Consensus 156 ~~-----------~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~----~~~r~~~~~--~~~g~~~~~ 218 (647)
.. .+.+. .....+.+..+|+++......... ....+. ......... ......++.
T Consensus 82 ~~~~~~g~l~~~~~~~~~-------~~~~~~~~~~~g~~~~~l~~~~~~-~~~p~~~~~~~~~~~~~~~~g~~~~~~l~~ 153 (372)
T 2uzz_A 82 PIFVRSGVINLGPADSTF-------LANVAHSAEQWQLNVEKLDAQGIM-ARWPEIRVPDNYIGLFETDSGFLRSELAIK 153 (372)
T ss_dssp CSEECCCEEEEEETTCHH-------HHHHHHHHHHTTCCEEEEEHHHHH-HHCTTCCCCTTEEEEEESSCEEEEHHHHHH
T ss_pred cceeeeceEEEeCCCcHH-------HHHHHHHHHHcCCCcEecCHHHHH-hhCCCccCCCCceEEEeCCCcEEcHHHHHH
Confidence 00 00111 112233445566554211000000 000000 000011111 113567888
Q ss_pred HHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccccc
Q 006387 219 ALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHI 283 (647)
Q Consensus 219 ~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~ 283 (647)
.|.+.+.+. |++++++++|+++..+++ .+ .+. +.+| .++|+.||+|+|+++..
T Consensus 154 ~l~~~~~~~-G~~i~~~~~V~~i~~~~~----~~-~v~---~~~g---~~~a~~vV~a~G~~s~~ 206 (372)
T 2uzz_A 154 TWIQLAKEA-GCAQLFNCPVTAIRHDDD----GV-TIE---TADG---EYQAKKAIVCAGTWVKD 206 (372)
T ss_dssp HHHHHHHHT-TCEEECSCCEEEEEECSS----SE-EEE---ESSC---EEEEEEEEECCGGGGGG
T ss_pred HHHHHHHHC-CCEEEcCCEEEEEEEcCC----EE-EEE---ECCC---eEEcCEEEEcCCccHHh
Confidence 999988874 999999999999987633 22 232 2445 38999999999988753
No 118
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.10 E-value=4.5e-10 Score=120.51 Aligned_cols=155 Identities=15% Similarity=0.122 Sum_probs=88.6
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHHH
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
.++||+|||||++|+++|+.|++.| +|+|+||........ +.++.. ... ..+.
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~---g~~~~~-----~~~-~~l~----------------- 57 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVI---GESLLP-----RCM-EHLD----------------- 57 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCS---CCBCCG-----GGH-HHHH-----------------
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc---cCcccH-----hHH-HHHH-----------------
Confidence 3589999999999999999999999 999999987543110 001100 000 0000
Q ss_pred HHHHhHHHHHHHHHcCCCcccC----CCCCc---cccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEE
Q 006387 166 VCTEGPDRIRELIAIGASFDRG----EDGNL---HLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFA 238 (647)
Q Consensus 166 ~~~~~~~~i~~l~~~Gv~~~~~----~~g~~---~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v 238 (647)
. ....+.+.+.++..... ..... ............. .......+...|.+.+.+. |++++.++.|
T Consensus 58 --~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~r~~~~~~L~~~a~~~-gv~i~~~~~v 129 (421)
T 3nix_A 58 --E--AGFLDAVKAQGFQQKFGAKFVRGKEIADFNFSDQFSNGWNWT---WQVPRGNFDKTLADEAARQ-GVDVEYEVGV 129 (421)
T ss_dssp --H--TTCHHHHHHTTCEEECEEEEEETTEEEEEETTSCSSCSCCCE---EECCHHHHHHHHHHHHHHH-TCEEECSEEE
T ss_pred --H--cCChHHHHHcCCcccCCcEEEeCCeeEEEeehhhcCCCCCce---eEECHHHHHHHHHHHHHhC-CCEEEcCCEE
Confidence 0 00112233333322110 00000 0000000000000 0123456778888888874 9999999999
Q ss_pred EEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 239 IDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 239 ~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
+++..++++ .+ +.+. ..+|+..+++|+.||+|+|..+
T Consensus 130 ~~i~~~~~~---~~--v~v~-~~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 130 TDIKFFGTD---SV--TTIE-DINGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp EEEEEETTE---EE--EEEE-ETTSCEEEEEEEEEEECCGGGC
T ss_pred EEEEEeCCE---EE--EEEE-cCCCCEEEEEcCEEEECCCCch
Confidence 999887443 22 3333 2567777899999999999776
No 119
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.08 E-value=9.5e-10 Score=122.02 Aligned_cols=163 Identities=15% Similarity=0.132 Sum_probs=91.5
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHHH
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
.++||||||||++|+++|+.|++.| +|+||||........ . ..++ .+...+.
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~-~-~~~l-------------------------~~~~~~~ 56 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYP-R-AAGQ-------------------------NPRTMEL 56 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCC-C-SCCB-------------------------CHHHHHH
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCC-c-cceE-------------------------CHHHHHH
Confidence 4689999999999999999999999 999999987543211 1 0111 1111111
Q ss_pred HHHHhHHHHHHHHHcCCCcccCCCCCc-cccccCCccccce----------------eeccCCchHHHHHHHHHHHHcCC
Q 006387 166 VCTEGPDRIRELIAIGASFDRGEDGNL-HLAREGGHSHHRI----------------VHAADMTGREIERALLEAVVSDP 228 (647)
Q Consensus 166 ~~~~~~~~i~~l~~~Gv~~~~~~~g~~-~~~~~gg~~~~r~----------------~~~~~~~g~~~~~~L~~~~~~~~ 228 (647)
+.+. ...+.+.+.+.++.....-.+ ......+....+. ..........+...|.+.+.+.
T Consensus 57 l~~l--Gl~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~- 133 (535)
T 3ihg_A 57 LRIG--GVADEVVRADDIRGTQGDFVIRLAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKH- 133 (535)
T ss_dssp HHHT--TCHHHHHHSCCSSCTTSCCEEEEESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHT-
T ss_pred HHHc--CCHHHHHhhCCCcccccceeeeEEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhC-
Confidence 1110 112333444444322100000 0000000000000 0011123567888899999885
Q ss_pred CcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006387 229 NISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 229 gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~ 282 (647)
|++|+.+++|+++..++++ ++.++.+.....+...+++|+.||.|+|..+.
T Consensus 134 gv~i~~~~~v~~i~~~~~~---~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S~ 184 (535)
T 3ihg_A 134 GGAIRFGTRLLSFRQHDDD---AGAGVTARLAGPDGEYDLRAGYLVGADGNRSL 184 (535)
T ss_dssp TCEEESSCEEEEEEEECGG---GCSEEEEEEEETTEEEEEEEEEEEECCCTTCH
T ss_pred CCEEEeCCEEEEEEECCCC---ccccEEEEEEcCCCeEEEEeCEEEECCCCcch
Confidence 9999999999999987542 22233332212222457999999999998764
No 120
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.07 E-value=1e-09 Score=122.57 Aligned_cols=156 Identities=19% Similarity=0.181 Sum_probs=90.8
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHH
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVR 164 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~ 164 (647)
+.++||+|||||+||+++|+.|++.| +|+|||+......... .++ .+....
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G---~~l-------------------------~p~~~~ 72 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVG---ESL-------------------------LPGTMS 72 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCC---CBC-------------------------CHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCcee---eeE-------------------------CHHHHH
Confidence 44699999999999999999999999 9999999876443210 011 011111
Q ss_pred HHHHHhHHHHHHHHHcCCCcc------cCCCCCc-cccccCC----ccccceeeccCCchHHHHHHHHHHHHcCCCcEEE
Q 006387 165 VVCTEGPDRIRELIAIGASFD------RGEDGNL-HLAREGG----HSHHRIVHAADMTGREIERALLEAVVSDPNISVF 233 (647)
Q Consensus 165 ~~~~~~~~~i~~l~~~Gv~~~------~~~~g~~-~~~~~gg----~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~ 233 (647)
.+... ...+.+...+.... ....... ....... ...+... ......+...|.+.+.+ .|++++
T Consensus 73 ~l~~l--Gl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~r~~l~~~L~~~a~~-~Gv~i~ 146 (591)
T 3i3l_A 73 ILNRL--GLQEKIDAQNYVKKPSATFLWGQDQAPWTFSFAAPKVAPWVFDHAV---QVKREEFDKLLLDEARS-RGITVH 146 (591)
T ss_dssp HHHHT--TCHHHHHHHCCEEECEEEEECSSSCCCEEEECCCC--CTTCCSCEE---ECCHHHHHHHHHHHHHH-TTCEEE
T ss_pred HHHHc--CCcHHHHhcCCcccCCcEEEecCCCccceeecccccccccccCeeE---EEcHHHHHHHHHHHHHh-CCCEEE
Confidence 00000 01112222222211 0000000 0000000 0001111 11345677888888887 599999
Q ss_pred cceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 234 EHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 234 ~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
.++.|+++..+ ++ .+.+|.+.+ +|+..+++|+.||.|+|..+
T Consensus 147 ~g~~V~~v~~~-~g---~~~~V~~~~--~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 147 EETPVTDVDLS-DP---DRVVLTVRR--GGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp TTCCEEEEECC-ST---TCEEEEEEE--TTEEEEEEESEEEECCGGGC
T ss_pred eCCEEEEEEEc-CC---CEEEEEEec--CCceEEEEcCEEEECCCCcc
Confidence 99999999876 33 456676653 56666899999999999766
No 121
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.04 E-value=2.6e-09 Score=124.75 Aligned_cols=179 Identities=15% Similarity=0.152 Sum_probs=100.5
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC--CeEEEEecCCC--CCCccccCCCeeeecCCCCCHHHHHHH---HHHhcc-----
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPH--ESNTNYAQGGVSAVLCPSDSVESHMQD---TIVAGA----- 155 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~~~~--~G~t~~a~Ggi~~~~~~~d~~~~~~~~---~~~~g~----- 155 (647)
++||+|||||++|+++|++|+++| +|+||||.... +|++..+.| +............+... .+..-.
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~~~~~gss~~~~G-~~~~~~~~~~~~~l~~~s~~~~~~l~~~~~~ 82 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLNMPGGSTSHAPG-LVFQTNPSKTMASFAKYTVEKLLSLTEDGVS 82 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCTTCCCSGGGTCCC-EECCCCSCHHHHHHHHHHHHHHHHCEETTEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCCCCCcccceeCCc-eeecCCCCHHHHHHHHHHHHHHHHHHhhCCC
Confidence 589999999999999999999999 69999998864 455554444 32221111111111111 111100
Q ss_pred -----c----CCCHHHHHHHHHHhHHHHHHHHHcCCCcccCCCCCcc-c-cccCCccc-cceeecc--CCchHHHHHHHH
Q 006387 156 -----Y----LCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLH-L-AREGGHSH-HRIVHAA--DMTGREIERALL 221 (647)
Q Consensus 156 -----~----~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~-~-~~~gg~~~-~r~~~~~--~~~g~~~~~~L~ 221 (647)
+ ..+++... ......+++..+|+++......... . ........ .....+. ......+...|.
T Consensus 83 ~~~~~G~l~~~~~~~~~~----~l~~~~~~~~~~G~~~~~l~~~e~~~~~p~l~~~~~~gg~~~~~~g~v~p~~l~~~L~ 158 (830)
T 1pj5_A 83 CFNQVGGLEVATTETRLA----DLKRKLGYAAAWGIEGRLLSPAECQELYPLLDGENILGGLHVPSDGLASAARAVQLLI 158 (830)
T ss_dssp SEECCCEEEEESSHHHHH----HHHHHHHHHHHHTCCCEEECHHHHHHHCTTSCGGGCCEEEEETTCEEECHHHHHHHHH
T ss_pred CeeecCcEEEEeCHHHHH----HHHHHHHHHHHcCCCeEEECHHHHHHhCccCCccceEEEEEECCCceEcHHHHHHHHH
Confidence 0 01222211 1223344556667654321000000 0 00000000 0011111 114567889999
Q ss_pred HHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006387 222 EAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 222 ~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~ 282 (647)
+.+++. |++|++++.|++|..+ ++ ++.+|.. .+| .|+|+.||+|+|.++.
T Consensus 159 ~~a~~~-Gv~i~~~t~V~~i~~~-~~---~v~~V~t---~~G---~i~Ad~VV~AaG~~s~ 208 (830)
T 1pj5_A 159 KRTESA-GVTYRGSTTVTGIEQS-GG---RVTGVQT---ADG---VIPADIVVSCAGFWGA 208 (830)
T ss_dssp HHHHHT-TCEEECSCCEEEEEEE-TT---EEEEEEE---TTE---EEECSEEEECCGGGHH
T ss_pred HHHHHc-CCEEECCceEEEEEEe-CC---EEEEEEE---CCc---EEECCEEEECCccchH
Confidence 999884 9999999999999876 44 5666643 344 5899999999998864
No 122
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.03 E-value=2.9e-10 Score=123.12 Aligned_cols=50 Identities=22% Similarity=0.294 Sum_probs=41.8
Q ss_pred cCceEECCC-CCcccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhhc
Q 006387 436 CGGVRAGLQ-GETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 436 ~GGi~vD~~-~~T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
.|.|.||++ ++|++||+||+|||+ .|. .....|+-.|+.||+++..++..
T Consensus 395 ~G~i~vd~~~~~Ts~~~VfA~GD~~-~g~--------~~v~~A~~~G~~aA~~i~~~L~~ 445 (456)
T 2vdc_G 395 WGTLLVDHRTKMTNMDGVFAAGDIV-RGA--------SLVVWAIRDGRDAAEGIHAYAKA 445 (456)
T ss_dssp TSSBCCCTTTCBCSSTTEEECGGGG-SSC--------CSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEECCCCCcCCCCCEEEecccc-CCc--------hHHHHHHHHHHHHHHHHHHHhhc
Confidence 378999998 899999999999997 332 23677888999999999998854
No 123
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.00 E-value=4.8e-10 Score=119.83 Aligned_cols=45 Identities=20% Similarity=0.338 Sum_probs=39.2
Q ss_pred cccCEEEECcchHHHHHHHHHHhc--C-CeEEEEecCCCCCCccccCC
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKH--G-TVAVITKAEPHESNTNYAQG 131 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~--G-~V~llEk~~~~~G~t~~a~G 131 (647)
.++||+|||||++|+++|+.|+++ | +|+|||+....++.+..+.|
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g 82 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILA 82 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCC
Confidence 458999999999999999999999 9 99999998877666655544
No 124
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.97 E-value=3.1e-09 Score=104.39 Aligned_cols=122 Identities=15% Similarity=0.120 Sum_probs=78.4
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHHHH
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVV 166 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~ 166 (647)
++||+|||||++|+.+|+.|++.| +|+|||+.....|.+ .... +. . .....+
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~-~~~~-~~---~------------------~~~~~~---- 55 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMP-FLPP-KP---P------------------FPPGSL---- 55 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCC-SSCC-CS---C------------------CCTTCH----
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcc-cCcc-cc---c------------------cchhhH----
Confidence 589999999999999999999999 999999974322211 1100 00 0 000000
Q ss_pred HHHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCC
Q 006387 167 CTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLD 246 (647)
Q Consensus 167 ~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~ 246 (647)
++++. +..| + ....+...|.+.+++.+|++++ +++|+++..+ +
T Consensus 56 -------~~~~~--------d~~g------------~--------~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~-~ 98 (232)
T 2cul_A 56 -------LERAY--------DPKD------------E--------RVWAFHARAKYLLEGLRPLHLF-QATATGLLLE-G 98 (232)
T ss_dssp -------HHHHC--------CTTC------------C--------CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEE-T
T ss_pred -------Hhhhc--------cCCC------------C--------CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEe-C
Confidence 00110 0000 0 1235667777788764599999 5799999876 4
Q ss_pred CCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 247 GPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 247 g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
+ ++.++.. .+|+ .++|+.||+|||.++
T Consensus 99 ~---~v~~v~~---~~g~--~i~a~~VV~A~G~~s 125 (232)
T 2cul_A 99 N---RVVGVRT---WEGP--PARGEKVVLAVGSFL 125 (232)
T ss_dssp T---EEEEEEE---TTSC--CEECSEEEECCTTCS
T ss_pred C---EEEEEEE---CCCC--EEECCEEEECCCCCh
Confidence 4 5666654 3454 589999999999865
No 125
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.97 E-value=1.4e-09 Score=119.35 Aligned_cols=141 Identities=18% Similarity=0.165 Sum_probs=86.7
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHH
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVR 164 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~ 164 (647)
...+||+|||||++|+++|+.|++.| +|+|||+.+..++... +. . .+.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~-----~~-~----------------------~~~--- 138 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNV-----LH-L----------------------WPF--- 138 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCE-----EE-C----------------------CHH---
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCc-----cc-C----------------------Chh---
Confidence 34689999999999999999999999 9999999876543210 00 0 011
Q ss_pred HHHHHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEEec
Q 006387 165 VVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTT 244 (647)
Q Consensus 165 ~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~ 244 (647)
.++.+..+|+... .+.+.. .... ......+...|.+.+.+ .|++|+.++.|+++..+
T Consensus 139 --------~~~~l~~~g~~~~---~~~~~~-----~~~~------~~~~~~l~~~L~~~~~~-~gv~v~~~~~v~~i~~~ 195 (497)
T 2bry_A 139 --------TIHDLRALGAKKF---YGRFCT-----GTLD------HISIRQLQLLLLKVALL-LGVEIHWGVKFTGLQPP 195 (497)
T ss_dssp --------HHHHHHTTTHHHH---CTTTTC-----TTCC------EEEHHHHHHHHHHHHHH-TTCEEEESCEEEEEECC
T ss_pred --------HHHHHHHcCCccc---cccccc-----cccc------cCCHHHHHHHHHHHHHh-CCCEEEeCCEEEEEEEe
Confidence 1112222222100 000000 0000 01235677888888887 59999999999999874
Q ss_pred C-CCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccccc
Q 006387 245 L-DGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHI 283 (647)
Q Consensus 245 ~-~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~ 283 (647)
+ ++ ...+|.+.+..+|+...++|+.||+|+|+.+..
T Consensus 196 ~~~~---~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 196 PRKG---SGWRAQLQPNPPAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp CSTT---CCBEEEEESCCCHHHHTCCBSEEEECCCTTCCC
T ss_pred cCCC---CEEEEEEEECCCCCEEEEEcCEEEECCCCCccc
Confidence 2 22 234555532214532358999999999998744
No 126
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.95 E-value=1.8e-08 Score=111.39 Aligned_cols=56 Identities=14% Similarity=0.207 Sum_probs=45.3
Q ss_pred HHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 220 LLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 220 L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
+...++.++|++|+.++.|+.++.+ ++ +++||.+.+ .+....+.||.||||+|++.
T Consensus 216 ~~~~~~~r~nl~v~~~~~v~~i~~~-~~---~a~gv~~~~--~~~~~~~~a~~VILsAGai~ 271 (526)
T 3t37_A 216 LTKAVRGRKNLTILTGSRVRRLKLE-GN---QVRSLEVVG--RQGSAEVFADQIVLCAGALE 271 (526)
T ss_dssp SCHHHHTCTTEEEECSCEEEEEEEE-TT---EEEEEEEEE--TTEEEEEEEEEEEECSHHHH
T ss_pred ccccccCCCCeEEEeCCEEEEEEec-CC---eEEEEEEEe--cCceEEEeecceEEcccccC
Confidence 3344555679999999999999987 44 899999875 35667889999999999875
No 127
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.94 E-value=5.9e-09 Score=111.52 Aligned_cols=156 Identities=17% Similarity=0.142 Sum_probs=87.8
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-C-eEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHHH
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-T-VAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~-V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
.+||+|||||++|+++|+.|++.| + |+|+||....+.. ..|+... +...+.
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~----g~g~~l~-----------------------~~~~~~ 56 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPL----GVGINIQ-----------------------PAAVEA 56 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCC----SCEEEEC-----------------------HHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccc----eeEEEEC-----------------------hHHHHH
Confidence 589999999999999999999999 9 9999998754321 1122211 111111
Q ss_pred HHHHhHHHHHHHHHcCCCccc----CCCCCcccccc----CCccccceeeccCCchHHHHHHHHHHHHcC-CCcEEEcce
Q 006387 166 VCTEGPDRIRELIAIGASFDR----GEDGNLHLARE----GGHSHHRIVHAADMTGREIERALLEAVVSD-PNISVFEHH 236 (647)
Q Consensus 166 ~~~~~~~~i~~l~~~Gv~~~~----~~~g~~~~~~~----gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~-~gv~i~~~~ 236 (647)
+... ...+.+...+.+... ..+|....... .+...+. .......+...|.+.+.+. ..++|+.++
T Consensus 57 l~~l--g~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----~~i~r~~l~~~L~~~~~~~~g~~~v~~~~ 130 (410)
T 3c96_A 57 LAEL--GLGPALAATAIPTHELRYIDQSGATVWSEPRGVEAGNAYPQ----YSIHRGELQMILLAAVRERLGQQAVRTGL 130 (410)
T ss_dssp HHHT--TCHHHHHHHSEEECEEEEECTTSCEEEEEECGGGGTCSSCE----EEEEHHHHHHHHHHHHHHHHCTTSEEESE
T ss_pred HHHC--CChHHHHhhCCCcceEEEEcCCCCEEeeccCCccccCCCCe----eeeeHHHHHHHHHHHHHhhCCCcEEEECC
Confidence 1100 011222233322210 11222111000 0000000 0112346777888887652 236899999
Q ss_pred EEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006387 237 FAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 237 ~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~ 282 (647)
+|+++.. +++ +. +.+.+..+|+..+++|+.||.|+|..+.
T Consensus 131 ~v~~i~~-~~~----v~-v~~~~~~~g~~~~~~ad~vV~AdG~~S~ 170 (410)
T 3c96_A 131 GVERIEE-RDG----RV-LIGARDGHGKPQALGADVLVGADGIHSA 170 (410)
T ss_dssp EEEEEEE-ETT----EE-EEEEEETTSCEEEEEESEEEECCCTTCH
T ss_pred EEEEEec-CCc----cE-EEEecCCCCCceEEecCEEEECCCccch
Confidence 9999987 444 32 4444433465557999999999998875
No 128
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.92 E-value=1.5e-09 Score=115.37 Aligned_cols=63 Identities=17% Similarity=0.044 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccccc
Q 006387 214 REIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHI 283 (647)
Q Consensus 214 ~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~ 283 (647)
..+...|.+.+.+. |++++.+++|+++..++++ .+ .|.+.+ +|+..+++|+.||.|+|..+.+
T Consensus 103 ~~l~~~L~~~~~~~-g~~i~~~~~v~~i~~~~~~---~~-~v~~~~--~g~~~~~~a~~vV~AdG~~S~v 165 (394)
T 1k0i_A 103 TEVTRDLMEAREAC-GATTVYQAAEVRLHDLQGE---RP-YVTFER--DGERLRLDCDYIAGCDGFHGIS 165 (394)
T ss_dssp HHHHHHHHHHHHHT-TCEEESSCEEEEEECTTSS---SC-EEEEEE--TTEEEEEECSEEEECCCTTCST
T ss_pred HHHHHHHHHHHHhc-CCeEEeceeEEEEEEecCC---ce-EEEEec--CCcEEEEEeCEEEECCCCCcHH
Confidence 46777888888774 9999999999999875322 22 344322 5765679999999999988753
No 129
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.92 E-value=1.8e-08 Score=111.99 Aligned_cols=156 Identities=12% Similarity=0.092 Sum_probs=87.5
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHHH
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
.++||||||||++|+++|+.|++.| +|+||||....+... . ..++. +...+.
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~-~-~~~l~-------------------------~~~~~~ 77 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHP-R-VGTIG-------------------------PRSMEL 77 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSC-C-CCEEC-------------------------HHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCC-c-eeeeC-------------------------HHHHHH
Confidence 4689999999999999999999999 999999987543211 0 01111 111111
Q ss_pred HHHHhHHHHHHHHHcCCCccc--------CCCCCc-c-cccc------CCccccceeeccCCchHHHHHHHHHHHHcCCC
Q 006387 166 VCTEGPDRIRELIAIGASFDR--------GEDGNL-H-LARE------GGHSHHRIVHAADMTGREIERALLEAVVSDPN 229 (647)
Q Consensus 166 ~~~~~~~~i~~l~~~Gv~~~~--------~~~g~~-~-~~~~------gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~g 229 (647)
+... ...+.+.+.+.+... ...|.. . +... .....+...+ ......+...|.+.+.+.
T Consensus 78 l~~l--Gl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~~l~~~L~~~a~~~-- 151 (549)
T 2r0c_A 78 FRRW--GVAKQIRTAGWPGDHPLDAAWVTRVGGHEVYRIPLGTADTRATPEHTPEPDA--ICPQHWLAPLLAEAVGER-- 151 (549)
T ss_dssp HHHT--TCHHHHHTSSCCTTSBCCEEEESSBTSCEEEEECCCBTTTSCCCSSCSSCCE--ECCHHHHHHHHHHHHGGG--
T ss_pred HHHc--CChHHHHhhcCCcccccceEEeccCCCceeEeecccccccccccCCCCCccc--ccCHHHHHHHHHHHHHHh--
Confidence 1100 012223334433311 011110 0 0000 0000000000 112345667777777652
Q ss_pred cEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006387 230 ISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 230 v~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~ 282 (647)
|+.+++|+++..++++ |. +.+.+..+|+..+++|+.||.|+|+.+.
T Consensus 152 --v~~~~~v~~~~~~~~~----v~-v~~~~~~~G~~~~i~a~~vVgADG~~S~ 197 (549)
T 2r0c_A 152 --LRTRSRLDSFEQRDDH----VR-ATITDLRTGATRAVHARYLVACDGASSP 197 (549)
T ss_dssp --EECSEEEEEEEECSSC----EE-EEEEETTTCCEEEEEEEEEEECCCTTCH
T ss_pred --cccCcEEEEEEEeCCE----EE-EEEEECCCCCEEEEEeCEEEECCCCCcH
Confidence 8999999999987443 43 4555544576668999999999998874
No 130
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=98.91 E-value=2.1e-08 Score=112.06 Aligned_cols=62 Identities=18% Similarity=0.162 Sum_probs=47.6
Q ss_pred HHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEc-CeEEECCCccc
Q 006387 219 ALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFIS-KVTLLASGGAG 281 (647)
Q Consensus 219 ~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~A-k~VVlAtGg~~ 281 (647)
+++..+.++.|++|++++.|++|+.++++...+++||.+.+ .+|+.++|+| |.||||+|+++
T Consensus 235 ~~l~~~~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~-~~g~~~~v~A~k~VILaaG~~~ 297 (587)
T 1gpe_A 235 AWLLPNYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGT-NKAVNFDVFAKHEVLLAAGSAI 297 (587)
T ss_dssp HHTTTTTTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEE-ETTEEEEEEEEEEEEECSCTTT
T ss_pred HHHHHhhcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEe-CCCcEEEEEecccEEEccCCCC
Confidence 34433444579999999999999987421112899999876 4688888999 99999999986
No 131
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.90 E-value=1.8e-09 Score=115.57 Aligned_cols=50 Identities=16% Similarity=0.163 Sum_probs=38.4
Q ss_pred cCceEECCCCCc-ccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhh
Q 006387 436 CGGVRAGLQGET-NVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHK 492 (647)
Q Consensus 436 ~GGi~vD~~~~T-~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~ 492 (647)
.|.|.||+.+|| +.||+||+|||+ ++ +. ......|...|+.|++++..++
T Consensus 285 ~G~i~vd~~~~~~~~~~vfa~GD~~--~~-~~----~~~~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 285 GGFIPTDLNMVSIKYDNVYAVGDAN--SM-TV----PKLGYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp TSCBCBBTTSBBSSCTTEEECGGGB--TT-CC----SCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEeCcccccCCCCCEEEeehhc--cC-CC----CcHHHHHHHHHHHHHHHHHHHh
Confidence 466999999998 899999999997 22 11 1223457778899999998877
No 132
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.90 E-value=1.3e-08 Score=111.64 Aligned_cols=149 Identities=14% Similarity=0.094 Sum_probs=88.1
Q ss_pred CccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHH
Q 006387 85 SVKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETV 163 (647)
Q Consensus 85 ~~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~ 163 (647)
.+.++||+|||||++|+++|+.|++.| +|+||||.+...... .++.. .+
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~----r~~~l-----------------------~~--- 57 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGES----RGLGF-----------------------TA--- 57 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCC----CSEEE-----------------------CH---
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCC----CcceE-----------------------CH---
Confidence 356799999999999999999999999 999999986543211 01110 01
Q ss_pred HHHHHHhHHHHHHHHHcCCCc--ccC--CC-C---Ccccccc-CCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEc
Q 006387 164 RVVCTEGPDRIRELIAIGASF--DRG--ED-G---NLHLARE-GGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFE 234 (647)
Q Consensus 164 ~~~~~~~~~~i~~l~~~Gv~~--~~~--~~-g---~~~~~~~-gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~ 234 (647)
..++.|+++|+.- ... .. + ...+... ....++..+ ......+...|.+.+.+. |++|+.
T Consensus 58 --------~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~l~~~L~~~~~~~-gv~v~~ 125 (500)
T 2qa1_A 58 --------RTMEVFDQRGILPRFGEVETSTQGHFGGLPIDFGVLEGAWQAAK---TVPQSVTETHLEQWATGL-GADIRR 125 (500)
T ss_dssp --------HHHHHHHTTTCGGGGCSCCBCCEEEETTEEEEGGGSTTGGGCEE---EEEHHHHHHHHHHHHHHT-TCEEEE
T ss_pred --------HHHHHHHHCCCHHHHHhccccccccccceecccccCCCCCCcee---ecCHHHHHHHHHHHHHHC-CCEEEC
Confidence 1122233333311 000 00 0 0000000 000011101 012356778888888874 999999
Q ss_pred ceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006387 235 HHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 235 ~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~ 282 (647)
+++|+++..+++ .|. +.+.+ .+| ..+++|+.||.|+|+.+.
T Consensus 126 ~~~v~~i~~~~~----~v~-v~~~~-~~g-~~~~~a~~vVgADG~~S~ 166 (500)
T 2qa1_A 126 GHEVLSLTDDGA----GVT-VEVRG-PEG-KHTLRAAYLVGCDGGRSS 166 (500)
T ss_dssp TCEEEEEEEETT----EEE-EEEEE-TTE-EEEEEESEEEECCCTTCH
T ss_pred CcEEEEEEEcCC----eEE-EEEEc-CCC-CEEEEeCEEEECCCcchH
Confidence 999999988743 343 44444 234 457999999999998874
No 133
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.90 E-value=8.9e-09 Score=114.62 Aligned_cols=155 Identities=16% Similarity=0.131 Sum_probs=85.5
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHHH
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
.++||+|||||++|+++|+.|++.| +|+||||........ ...++. +...+.
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~--r~~~l~-------------------------~~s~~~ 100 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHD--RAGALH-------------------------IRTVET 100 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSS--SCCCBC-------------------------HHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCc--eEEEEC-------------------------HHHHHH
Confidence 4689999999999999999999999 999999987543211 011111 111111
Q ss_pred HHHHhHHHHHHHHHcCCCcccC-CCC----CccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEE
Q 006387 166 VCTEGPDRIRELIAIGASFDRG-EDG----NLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAID 240 (647)
Q Consensus 166 ~~~~~~~~i~~l~~~Gv~~~~~-~~g----~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~ 240 (647)
+.. ....+.+...+...... -.+ .+...... ...+. ........+...|.+.+.+ .|++|+.+++|++
T Consensus 101 l~~--lGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~i~~~~l~~~L~~~a~~-~gv~i~~~~~v~~ 173 (570)
T 3fmw_A 101 LDL--RGLLDRFLEGTQVAKGLPFAGIFTQGLDFGLVD-TRHPY---TGLVPQSRTEALLAEHARE-AGAEIPRGHEVTR 173 (570)
T ss_dssp HHT--TTCHHHHTTSCCBCSBCCBTTBCTTCCBGGGSC-CSCCS---BBCCCHHHHHHHHHHHHHH-HTEECCBSCEEEE
T ss_pred HHH--cCChHHHHhcCcccCCceeCCcccccccccccC-CCCCe---eEEeCHHHHHHHHHHHHHh-CCCEEEeCCEEEE
Confidence 100 00112222222221110 000 00000000 00000 0112345677888888887 4999999999999
Q ss_pred EEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006387 241 LLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 241 l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~ 282 (647)
+..++++ +. |.+.+ .+|+ .+++|+.||.|+|..+.
T Consensus 174 l~~~~~~----v~-v~~~~-~~G~-~~~~a~~vV~ADG~~S~ 208 (570)
T 3fmw_A 174 LRQDAEA----VE-VTVAG-PSGP-YPVRARYGVGCDGGRST 208 (570)
T ss_dssp CCBCSSC----EE-EEEEE-TTEE-EEEEESEEEECSCSSCH
T ss_pred EEEcCCe----EE-EEEEe-CCCc-EEEEeCEEEEcCCCCch
Confidence 9876443 32 33322 3453 47999999999998764
No 134
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.89 E-value=1.7e-08 Score=110.68 Aligned_cols=148 Identities=18% Similarity=0.170 Sum_probs=88.0
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHH
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVR 164 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~ 164 (647)
+.++||+|||||++|+++|+.|++.| +|+||||.+...... .++.. .+
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~----r~~~l-----------------------~~---- 58 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGES----RGLGF-----------------------TA---- 58 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCC----CSEEE-----------------------CH----
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCC----ceeEE-----------------------CH----
Confidence 45799999999999999999999999 999999986543211 11110 01
Q ss_pred HHHHHhHHHHHHHHHcCCCcccCCCCCccccccCC---------ccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcc
Q 006387 165 VVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGG---------HSHHRIVHAADMTGREIERALLEAVVSDPNISVFEH 235 (647)
Q Consensus 165 ~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg---------~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~ 235 (647)
..++.|+++|+.-.-...........++ ...+... ......+...|.+.+.+. |++|+.+
T Consensus 59 -------~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~l~~~L~~~~~~~-gv~v~~~ 127 (499)
T 2qa2_A 59 -------RTMEVFDQRGILPAFGPVETSTQGHFGGRPVDFGVLEGAHYGVK---AVPQSTTESVLEEWALGR-GAELLRG 127 (499)
T ss_dssp -------HHHHHHHHTTCGGGGCSCCEESEEEETTEEEEGGGSTTCCCEEE---EEEHHHHHHHHHHHHHHT-TCEEEES
T ss_pred -------HHHHHHHHCCCHHHHHhccccccceecceecccccCCCCCCceE---ecCHHHHHHHHHHHHHhC-CCEEEcC
Confidence 1122233334321100000000000000 0001000 112356778888888874 9999999
Q ss_pred eEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006387 236 HFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 236 ~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~ 282 (647)
++|+++..++++ |. |.+.+ .+| ..+++|+.||.|+|+.+.
T Consensus 128 ~~v~~i~~~~~~----v~-v~~~~-~~g-~~~~~a~~vVgADG~~S~ 167 (499)
T 2qa2_A 128 HTVRALTDEGDH----VV-VEVEG-PDG-PRSLTTRYVVGCDGGRST 167 (499)
T ss_dssp CEEEEEEECSSC----EE-EEEEC-SSC-EEEEEEEEEEECCCTTCH
T ss_pred CEEEEEEEeCCE----EE-EEEEc-CCC-cEEEEeCEEEEccCcccH
Confidence 999999887543 43 44443 334 357999999999998874
No 135
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.89 E-value=1.1e-08 Score=108.91 Aligned_cols=156 Identities=17% Similarity=0.187 Sum_probs=86.5
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHHH
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
.++||+|||||++|+++|+.|++.| +|+|+||.+.... . ..++.. .+.....
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~-~---~~~~~l-----------------------~~~~~~~ 57 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERA-I---NGADLL-----------------------KPAGIRV 57 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC-------CCCCEE-----------------------CHHHHHH
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCc-c---CceeeE-----------------------CchHHHH
Confidence 3589999999999999999999999 9999999864311 0 011110 0111111
Q ss_pred HHHHhHHHHHHHHHcCCCccc----CCCCCccccc-cCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEE
Q 006387 166 VCTEGPDRIRELIAIGASFDR----GEDGNLHLAR-EGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAID 240 (647)
Q Consensus 166 ~~~~~~~~i~~l~~~Gv~~~~----~~~g~~~~~~-~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~ 240 (647)
+.+. ...+.+...+.++.. ..+|...... ......+... .......+...|.+.+.+.+|++++.+++|++
T Consensus 58 l~~~--g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~ 133 (399)
T 2x3n_A 58 VEAA--GLLAEVTRRGGRVRHELEVYHDGELLRYFNYSSVDARGYF--ILMPCESLRRLVLEKIDGEATVEMLFETRIEA 133 (399)
T ss_dssp HHHT--TCHHHHHHTTCEEECEEEEEETTEEEEEEETTSSCGGGCE--EECCHHHHHHHHHHHHTTCTTEEEECSCCEEE
T ss_pred HHHc--CcHHHHHHhCCCcceeEEEeCCCCEEEecchHHhcccCcc--ccccHHHHHHHHHHHhhhcCCcEEEcCCEEEE
Confidence 1000 011122222322210 0111100000 0000000000 01234577888888887745899999999999
Q ss_pred EEecCCCCCCeEE-EEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006387 241 LLTTLDGPDAVCH-GVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 241 l~~~~~g~~~~v~-Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~ 282 (647)
+..++++ ++ .+.. .+|+ +++|+.||+|+|..+.
T Consensus 134 i~~~~~~----v~g~v~~---~~g~--~~~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 134 VQRDERH----AIDQVRL---NDGR--VLRPRVVVGADGIASY 167 (399)
T ss_dssp EEECTTS----CEEEEEE---TTSC--EEEEEEEEECCCTTCH
T ss_pred EEEcCCc----eEEEEEE---CCCC--EEECCEEEECCCCChH
Confidence 9886443 43 2322 4565 5899999999998774
No 136
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.87 E-value=5.8e-08 Score=100.31 Aligned_cols=33 Identities=24% Similarity=0.337 Sum_probs=31.2
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
+||+|||||+||+.||+.|++.| +|+|+|+.+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 69999999999999999999999 9999999774
No 137
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.87 E-value=1.1e-08 Score=111.99 Aligned_cols=33 Identities=15% Similarity=0.346 Sum_probs=30.4
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
...|||||||.||+.+|..|++.+ +|+|||+.+
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSS
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCC
Confidence 457999999999999999999989 999999875
No 138
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.85 E-value=1.1e-09 Score=120.12 Aligned_cols=37 Identities=22% Similarity=0.365 Sum_probs=32.2
Q ss_pred ccccCEEEECcchHHHHHHHHHHhc--C-CeEEEEecCCC
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKH--G-TVAVITKAEPH 122 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~--G-~V~llEk~~~~ 122 (647)
+..+||+|||||+||++||..|++. | +|+|||+.+..
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~ 48 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPEL 48 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 3468999999999999999988876 6 99999998643
No 139
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.85 E-value=2e-08 Score=111.31 Aligned_cols=61 Identities=20% Similarity=0.354 Sum_probs=48.5
Q ss_pred HHHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcC-eEEECCCccc
Q 006387 218 RALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISK-VTLLASGGAG 281 (647)
Q Consensus 218 ~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak-~VVlAtGg~~ 281 (647)
.+++..+.++.|++|++++.|++|+.++++ +++||.+.+..+|+..+|+|+ .||||+|++.
T Consensus 212 ~a~l~~a~~~~~~~i~~~~~V~~i~~~~~~---~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~ 273 (546)
T 2jbv_A 212 VSYIHPIVEQENFTLLTGLRARQLVFDADR---RCTGVDIVDSAFGHTHRLTARNEVVLSTGAID 273 (546)
T ss_dssp HHHTGGGTTCTTEEEECSCEEEEEEECTTS---BEEEEEEESSTTSCEEEEEEEEEEEECSHHHH
T ss_pred HHHHHHHhcCCCcEEEeCCEEEEEEECCCC---eEEEEEEEECCCCcEEEEEeCccEEEecCccC
Confidence 445555554579999999999999987435 899999876434777889997 9999999874
No 140
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.81 E-value=9.4e-08 Score=102.46 Aligned_cols=57 Identities=14% Similarity=0.191 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 214 REIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 214 ~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
..+...|.+.+.+. |++|+++++|++|..+ ++ ++.||.. . |+ ++.|+.||+|+|...
T Consensus 196 ~~l~~~l~~~~~~~-G~~i~~~~~V~~i~~~-~~---~~~gv~~---~-g~--~~~ad~VV~a~~~~~ 252 (425)
T 3ka7_A 196 KGIIDALETVISAN-GGKIHTGQEVSKILIE-NG---KAAGIIA---D-DR--IHDADLVISNLGHAA 252 (425)
T ss_dssp HHHHHHHHHHHHHT-TCEEECSCCEEEEEEE-TT---EEEEEEE---T-TE--EEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHc-CCEEEECCceeEEEEE-CC---EEEEEEE---C-CE--EEECCEEEECCCHHH
Confidence 56888899999885 9999999999999987 44 6777754 2 54 589999999999754
No 141
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.81 E-value=2e-08 Score=107.25 Aligned_cols=153 Identities=14% Similarity=0.095 Sum_probs=82.8
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHH
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVR 164 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~ 164 (647)
...+||+|||||++|+++|+.|++.| +|+|+||....... ..++... +....
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~----~~~~~l~-----------------------~~~~~ 73 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPV----GAAISVW-----------------------PNGVK 73 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC--------CEEEEC-----------------------HHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCc----CeeEEEC-----------------------HHHHH
Confidence 45699999999999999999999999 99999998754211 1112110 11111
Q ss_pred HHHHHhHHHHHHHHHcCCCccc----CCC-CCccccccCCc---cccceeeccCCchHHHHHHHHHHHHcCCCcEEEcce
Q 006387 165 VVCTEGPDRIRELIAIGASFDR----GED-GNLHLAREGGH---SHHRIVHAADMTGREIERALLEAVVSDPNISVFEHH 236 (647)
Q Consensus 165 ~~~~~~~~~i~~l~~~Gv~~~~----~~~-g~~~~~~~gg~---~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~ 236 (647)
.+.+. ...+.+...+.+... ..+ |.......... ..... ........+...|.+.+.+ ++|+.++
T Consensus 74 ~l~~l--g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~i~r~~l~~~L~~~~~~---~~i~~~~ 146 (407)
T 3rp8_A 74 CMAHL--GMGDIMETFGGPLRRMAYRDFRSGENMTQFSLAPLIERTGSR--PCPVSRAELQREMLDYWGR---DSVQFGK 146 (407)
T ss_dssp HHHHT--TCHHHHHHHSCCCCEEEEEETTTCCEEEEEECHHHHHHHSSC--CEEEEHHHHHHHHHHHHCG---GGEEESC
T ss_pred HHHHC--CCHHHHHhhcCCCcceEEEECCCCCEeEEecchhhhhhcCCc--eEEEEHHHHHHHHHHhCCc---CEEEECC
Confidence 11100 011222333333211 011 21110000000 00000 0001235677777777754 8899999
Q ss_pred EEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006387 237 FAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 237 ~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~ 282 (647)
+|+++..++ + . +.+.. .+|+ ++.|+.||.|+|..+.
T Consensus 147 ~v~~i~~~~-~---~---v~v~~-~~g~--~~~a~~vV~AdG~~S~ 182 (407)
T 3rp8_A 147 RVTRCEEDA-D---G---VTVWF-TDGS--SASGDLLIAADGSHSA 182 (407)
T ss_dssp CEEEEEEET-T---E---EEEEE-TTSC--EEEESEEEECCCTTCS
T ss_pred EEEEEEecC-C---c---EEEEE-cCCC--EEeeCEEEECCCcChH
Confidence 999998874 3 2 33322 4565 6899999999998774
No 142
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.79 E-value=1.2e-08 Score=110.18 Aligned_cols=58 Identities=12% Similarity=0.073 Sum_probs=42.0
Q ss_pred cCceEECCCCCc-ccCceeecccccCCCCCCCC--cc---chhhhHHHHHHHHHHHHHHHHhhhcc
Q 006387 436 CGGVRAGLQGET-NVRGLYVAGEVACTGLHGAN--RL---ASNSLLEALVFARRAVQPSIDHKKST 495 (647)
Q Consensus 436 ~GGi~vD~~~~T-~ipGLyAaGe~a~~g~~Ga~--rl---~g~sl~~a~v~G~~Ag~~a~~~~~~~ 495 (647)
.|.|.||+++|| +.||+||+|||+ ++.+.+ .+ .......|...|+.|++++..++...
T Consensus 283 ~G~i~Vd~~l~t~~~~~Ifa~GD~~--~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~ 346 (437)
T 3sx6_A 283 GGFVLVDEHQRSKKYANIFAAGIAI--AIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGR 346 (437)
T ss_dssp TSCBCBCTTSBBSSCTTEEECGGGB--CCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTS
T ss_pred CCcEEeChhccCCCCCCEEEEEEEe--ccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCC
Confidence 477999999998 899999999997 222210 11 01234567788999999999888654
No 143
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.79 E-value=3.5e-08 Score=105.00 Aligned_cols=146 Identities=16% Similarity=0.193 Sum_probs=82.7
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHHH
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
..+||+|||||++|+++|+.|++.| +|+|+||.+..... ..+|+.. .
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~---~~~g~~l-----------------------~------ 51 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSG---FGTGIVV-----------------------Q------ 51 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCC---CSCEEEC-----------------------C------
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCc---ccccccc-----------------------C------
Confidence 3589999999999999999999999 99999998653111 1122221 1
Q ss_pred HHHHhHHHHHHHHHcCCCcccC--CCCCcccccc-CCccccceeeccC-CchHHHHHHHHHHHHcCCCcEEEcceEEEEE
Q 006387 166 VCTEGPDRIRELIAIGASFDRG--EDGNLHLARE-GGHSHHRIVHAAD-MTGREIERALLEAVVSDPNISVFEHHFAIDL 241 (647)
Q Consensus 166 ~~~~~~~~i~~l~~~Gv~~~~~--~~g~~~~~~~-gg~~~~r~~~~~~-~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l 241 (647)
+...+.|+++|+.-... .......... .+....+...... ..-..+...|.+.+ .+++++.+++|+++
T Consensus 52 -----~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~i~~~~~v~~i 123 (397)
T 2vou_A 52 -----PELVHYLLEQGVELDSISVPSSSMEYVDALTGERVGSVPADWRFTSYDSIYGGLYELF---GPERYHTSKCLVGL 123 (397)
T ss_dssp -----HHHHHHHHHTTCCGGGTCBCCCEEEEEETTTCCEEEEEECCCCEEEHHHHHHHHHHHH---CSTTEETTCCEEEE
T ss_pred -----hhHHHHHHHcCCccccccccccceEEEecCCCCccccccCcccccCHHHHHHHHHHhC---CCcEEEcCCEEEEE
Confidence 12233444555432000 0000000000 1111111000000 11234555565554 48999999999999
Q ss_pred EecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006387 242 LTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 242 ~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~ 282 (647)
..++++ +. +.. .+|+ +++|+.||.|+|..+.
T Consensus 124 ~~~~~~----v~-v~~---~~g~--~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 124 SQDSET----VQ-MRF---SDGT--KAEANWVIGADGGASV 154 (397)
T ss_dssp EECSSC----EE-EEE---TTSC--EEEESEEEECCCTTCH
T ss_pred EecCCE----EE-EEE---CCCC--EEECCEEEECCCcchh
Confidence 876443 32 222 4464 5899999999998764
No 144
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.77 E-value=1.9e-08 Score=105.67 Aligned_cols=38 Identities=34% Similarity=0.567 Sum_probs=34.7
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G 124 (647)
.++||+|||||++|+++|++|+++| +|+||||.....|
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 4689999999999999999999999 9999999886654
No 145
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.76 E-value=1.1e-08 Score=113.10 Aligned_cols=54 Identities=13% Similarity=0.097 Sum_probs=41.9
Q ss_pred cCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEE---EcCeEEECCCccc
Q 006387 226 SDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRF---ISKVTLLASGGAG 281 (647)
Q Consensus 226 ~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i---~Ak~VVlAtGg~~ 281 (647)
++.|++|++++.|++|+.++++ ..+++||.+.+ .+|+.+++ .+|.||||+|+++
T Consensus 205 ~~~~~~v~~~~~v~~i~~~~~~-~~~~~GV~~~~-~~g~~~~~~v~a~k~VILaaGa~~ 261 (536)
T 1ju2_A 205 NSNNLRVGVHASVEKIIFSNAP-GLTATGVIYRD-SNGTPHQAFVRSKGEVIVSAGTIG 261 (536)
T ss_dssp CTTTEEEEESCEEEEEEECCSS-SCBEEEEEEEC-TTSCEEEEEEEEEEEEEECCHHHH
T ss_pred cCCCcEEEeCCEEEEEEECCCC-CCEEEEEEEEe-CCCceEEEEeccCCEEEEcCcccC
Confidence 3469999999999999987431 12799999876 34665556 5699999999985
No 146
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.75 E-value=2.7e-08 Score=110.45 Aligned_cols=60 Identities=15% Similarity=0.238 Sum_probs=46.2
Q ss_pred HHHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCe--EE-EEEcCeEEECCCccc
Q 006387 218 RALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQE--VV-RFISKVTLLASGGAG 281 (647)
Q Consensus 218 ~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~--~~-~i~Ak~VVlAtGg~~ 281 (647)
.++++.+.+++|++|++++.|++|+.+ ++ +++||.+.+..+|+ .. .+.+|.||||+|+++
T Consensus 199 ~~~l~~~~~~~~~~i~~~~~V~~i~~~-~~---~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~ 261 (546)
T 1kdg_A 199 ATYLQTALARPNFTFKTNVMVSNVVRN-GS---QILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFG 261 (546)
T ss_dssp HTHHHHHHTCTTEEEECSCCEEEEEEE-TT---EEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHH
T ss_pred HHHHHHHhhCCCcEEEeCCEEEEEEEe-CC---EEEEEEEEecCCCceeEEEEEeCCEEEEcCChhc
Confidence 446666766679999999999999987 45 89999886543464 22 337899999999875
No 147
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.75 E-value=5.3e-08 Score=107.22 Aligned_cols=62 Identities=16% Similarity=0.158 Sum_probs=48.4
Q ss_pred hHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccccC
Q 006387 213 GREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIY 284 (647)
Q Consensus 213 g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~~ 284 (647)
...+...|.+.+.+ .|++++.+ +|+++..++++ .+.+|.. .+|+ +++|+.||.|+|..+.+.
T Consensus 172 ~~~l~~~L~~~a~~-~gv~~~~~-~v~~i~~~~~~---~~~~v~~---~~g~--~~~ad~vV~A~G~~S~~~ 233 (511)
T 2weu_A 172 ADEVARYLSEYAIA-RGVRHVVD-DVQHVGQDERG---WISGVHT---KQHG--EISGDLFVDCTGFRGLLI 233 (511)
T ss_dssp HHHHHHHHHHHHHH-TTCEEEEC-CEEEEEECTTS---CEEEEEE---SSSC--EEECSEEEECCGGGCCCC
T ss_pred HHHHHHHHHHHHHH-CCCEEEEC-eEeEEEEcCCC---CEEEEEE---CCCC--EEEcCEEEECCCcchHHH
Confidence 45778888888887 59999999 99999886455 5666654 3464 589999999999887653
No 148
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.75 E-value=7.2e-08 Score=108.32 Aligned_cols=55 Identities=7% Similarity=0.140 Sum_probs=45.9
Q ss_pred cCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006387 226 SDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 226 ~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~ 282 (647)
+++|++|++++.|++|+.++++ .++.||.+.+..+|+..++.|+.||+|+|.+..
T Consensus 271 ~~~nv~v~~~~~V~~i~~~~~~--~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s 325 (623)
T 3pl8_A 271 PEERFNLFPAVACERVVRNALN--SEIESLHIHDLISGDRFEIKADVYVLTAGAVHN 325 (623)
T ss_dssp EEEEEEEECSEEEEEEEECTTS--SCEEEEEEEETTTCCEEEECEEEEEECSCTTHH
T ss_pred cCCCEEEEeCCEEEEEEEECCC--CEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCC
Confidence 3358999999999999987433 379999998866788889999999999997753
No 149
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.74 E-value=4.8e-08 Score=103.18 Aligned_cols=147 Identities=16% Similarity=0.127 Sum_probs=83.2
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHHH
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
..+||+|||||++|+++|+.|++.| +|+|+|+....+.. ..++... +.....
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~----~~~~~l~-----------------------~~~~~~ 62 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAF----GAGIYLW-----------------------HNGLRV 62 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCC----SSEEEEE-----------------------HHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCC----CceEEeC-----------------------ccHHHH
Confidence 4689999999999999999999999 99999998765321 1122111 111000
Q ss_pred HHHHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceee----ccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEE
Q 006387 166 VCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVH----AADMTGREIERALLEAVVSDPNISVFEHHFAIDL 241 (647)
Q Consensus 166 ~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~----~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l 241 (647)
+... ...+.+...+.+... +.+... +....+.-. ........+...|.+.+.+. |++++.+++|+++
T Consensus 63 l~~~--g~~~~~~~~~~~~~~-----~~~~~~-g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-gv~i~~~~~v~~i 133 (379)
T 3alj_A 63 LEGL--GALDDVLQGSHTPPT-----YETWMH-NKSVSKETFNGLPWRIMTRSHLHDALVNRARAL-GVDISVNSEAVAA 133 (379)
T ss_dssp HHHT--TCHHHHHTTCBCCSC-----EEEEET-TEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHT-TCEEESSCCEEEE
T ss_pred HHHc--CCHHHHHhhCCCccc-----eEEEeC-CceeeeccCCCCceEEECHHHHHHHHHHHHHhc-CCEEEeCCEEEEE
Confidence 0000 001122222222110 000000 100000000 00112456788888888874 9999999999999
Q ss_pred EecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006387 242 LTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 242 ~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~ 282 (647)
.. + . .|.. .+|+ +++|+.||.|+|..+.
T Consensus 134 ~~--~----~--~v~~---~~g~--~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 134 DP--V----G--RLTL---QTGE--VLEADLIVGADGVGSK 161 (379)
T ss_dssp ET--T----T--EEEE---TTSC--EEECSEEEECCCTTCH
T ss_pred Ee--C----C--EEEE---CCCC--EEEcCEEEECCCccHH
Confidence 75 2 1 2332 3454 5899999999998764
No 150
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.74 E-value=6.8e-09 Score=123.42 Aligned_cols=48 Identities=10% Similarity=0.008 Sum_probs=39.7
Q ss_pred CceEECC-CCCcccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhh
Q 006387 437 GGVRAGL-QGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKK 493 (647)
Q Consensus 437 GGi~vD~-~~~T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~ 493 (647)
|.|.||+ .++|++||+||+|||+ ++. ....+|+..|+.||+++..++.
T Consensus 460 G~I~vd~~~~~Ts~~~VfA~GD~~-~~~--------~~~~~A~~~G~~aA~~i~~~L~ 508 (1025)
T 1gte_A 460 DLPEVDPETMQTSEPWVFAGGDIV-GMA--------NTTVESVNDGKQASWYIHKYIQ 508 (1025)
T ss_dssp SSBCCCTTTCBCSSTTEEECSGGG-CSC--------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEECCCCCccCCCCEEEeCCCC-CCc--------hHHHHHHHHHHHHHHHHHHHHH
Confidence 6799997 7999999999999998 332 1356788899999999998875
No 151
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.73 E-value=8.5e-08 Score=106.29 Aligned_cols=62 Identities=13% Similarity=0.095 Sum_probs=47.7
Q ss_pred hHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccccC
Q 006387 213 GREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIY 284 (647)
Q Consensus 213 g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~~ 284 (647)
...+...|.+.+.+ .|++++.+ .|+++..++++ .+.+|.. .+|+ +++|+.||+|+|..+.+.
T Consensus 164 ~~~l~~~L~~~a~~-~gv~~~~~-~v~~i~~~~~g---~~~~v~~---~~g~--~i~ad~vV~A~G~~s~~~ 225 (538)
T 2aqj_A 164 AHLVADFLKRWAVE-RGVNRVVD-EVVDVRLNNRG---YISNLLT---KEGR--TLEADLFIDCSGMRGLLI 225 (538)
T ss_dssp HHHHHHHHHHHHHH-TTCEEEEC-CEEEEEECTTS---CEEEEEE---TTSC--EECCSEEEECCGGGCCCC
T ss_pred HHHHHHHHHHHHHH-CCCEEEEe-eEeEEEEcCCC---cEEEEEE---CCCc--EEEeCEEEECCCCchhhH
Confidence 45777888888887 59999999 89999876454 4555544 3464 589999999999887653
No 152
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.73 E-value=5.2e-08 Score=110.19 Aligned_cols=69 Identities=9% Similarity=0.101 Sum_probs=48.5
Q ss_pred hHHHHHHHHHHHHcCC-CcEEEcceEEEEEEecCCCCCCeEEEEEEEec---CCCeEEEEEcCeEEECCCcccc
Q 006387 213 GREIERALLEAVVSDP-NISVFEHHFAIDLLTTLDGPDAVCHGVDTLNV---ETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 213 g~~~~~~L~~~~~~~~-gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~---~~g~~~~i~Ak~VVlAtGg~~~ 282 (647)
...+...|.+.+.+.. +++|+.+++|+++..++++. ...+.|.+.+. .+|+..+++|+.||.|+|+.+.
T Consensus 140 q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~-~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~ 212 (639)
T 2dkh_A 140 QARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAA-DYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSN 212 (639)
T ss_dssp HHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCS-SCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCC-cCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchH
Confidence 4567788888888853 34999999999999874310 01233554431 2566668999999999998874
No 153
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.73 E-value=5.3e-08 Score=100.75 Aligned_cols=38 Identities=26% Similarity=0.459 Sum_probs=34.5
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESN 125 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~ 125 (647)
.+||+|||||++|+++|+.|++.| +|+|+||....+|.
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~ 40 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGR 40 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCccc
Confidence 379999999999999999999999 99999998766553
No 154
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.71 E-value=3.8e-09 Score=110.44 Aligned_cols=47 Identities=28% Similarity=0.307 Sum_probs=40.5
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-------CeEEEEecCCCCCCccccCCCeee
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-------TVAVITKAEPHESNTNYAQGGVSA 135 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-------~V~llEk~~~~~G~t~~a~Ggi~~ 135 (647)
.||+|||||++|+++|+.|+++| +|+|||+....+++|..++|.+..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~aS~~~~g~~~~ 54 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLTTTDVAAGLWQP 54 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGSGGGTCCCBCCC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCCccccCcceeec
Confidence 38999999999999999999984 899999998777877777766654
No 155
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.71 E-value=9.4e-08 Score=104.92 Aligned_cols=60 Identities=17% Similarity=0.255 Sum_probs=46.7
Q ss_pred HHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCC---eEEEEEcCeEEECCCccc
Q 006387 219 ALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQ---EVVRFISKVTLLASGGAG 281 (647)
Q Consensus 219 ~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g---~~~~i~Ak~VVlAtGg~~ 281 (647)
+++..+.+++|++|+.++.|++|+.++++ .+++||.+.+ .+| +..+|+|+.||||+|+++
T Consensus 226 ~~l~~a~~~~n~~i~~~~~V~~i~~~~~g--~~~~gV~~~~-~~g~~~~~~~v~A~~VIlaaG~~~ 288 (504)
T 1n4w_A 226 TYLAAALGTGKVTIQTLHQVKTIRQTKDG--GYALTVEQKD-TDGKLLATKEISCRYLFLGAGSLG 288 (504)
T ss_dssp THHHHHHHTTSEEEEESEEEEEEEECTTS--SEEEEEEEEC-TTCCEEEEEEEEEEEEEECSHHHH
T ss_pred HHHHHHHhcCCcEEEeCCEEEEEEECCCC--CEEEEEEEeC-CCCccceeEEEeeCEEEEccCCCC
Confidence 34455555567999999999999987433 3799998875 245 567899999999999985
No 156
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.70 E-value=2.3e-07 Score=101.74 Aligned_cols=57 Identities=12% Similarity=0.098 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcc
Q 006387 214 REIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGA 280 (647)
Q Consensus 214 ~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~ 280 (647)
..+.++|.+.+++. |++|+.+++|++|..+ ++ +++||.+ .+|+ +|.||.||.+++..
T Consensus 221 ~~l~~aL~~~~~~~-Gg~I~~~~~V~~I~~~-~~---~~~gV~~---~~g~--~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 221 GALVQGMIKLFQDL-GGEVVLNARVSHMETT-GN---KIEAVHL---EDGR--RFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHHHHHHHT-TCEEECSCCEEEEEEE-TT---EEEEEEE---TTSC--EEECSCEEECCC--
T ss_pred cchHHHHHHHHHHh-CCceeeecceeEEEee-CC---eEEEEEe---cCCc--EEEcCEEEECCCHH
Confidence 46788899999885 9999999999999987 55 7888876 4565 58999999998754
No 157
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.70 E-value=1.7e-07 Score=104.17 Aligned_cols=62 Identities=16% Similarity=0.115 Sum_probs=47.8
Q ss_pred hHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccccc
Q 006387 213 GREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHI 283 (647)
Q Consensus 213 g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~ 283 (647)
...+...|.+.+.+.+||+++.+ .|+++..++++ .+.+|.. .+|+ ++.|+.||+|+|..+.+
T Consensus 193 ~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g---~~~~v~~---~~G~--~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 193 AHLVADFLRRFATEKLGVRHVED-RVEHVQRDANG---NIESVRT---ATGR--VFDADLFVDCSGFRGLL 254 (550)
T ss_dssp HHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTS---CEEEEEE---TTSC--EEECSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCC---CEEEEEE---CCCC--EEECCEEEECCCCchhh
Confidence 45678888888877349999999 99999876455 5666654 3454 58999999999988765
No 158
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.69 E-value=9.8e-09 Score=110.54 Aligned_cols=58 Identities=7% Similarity=0.069 Sum_probs=42.0
Q ss_pred cC-ceEECCCCCc-ccCceeecccccCCCCCCC--Ccc---chhhhHHHHHHHHHHHHHHHHhhhcc
Q 006387 436 CG-GVRAGLQGET-NVRGLYVAGEVACTGLHGA--NRL---ASNSLLEALVFARRAVQPSIDHKKST 495 (647)
Q Consensus 436 ~G-Gi~vD~~~~T-~ipGLyAaGe~a~~g~~Ga--~rl---~g~sl~~a~v~G~~Ag~~a~~~~~~~ 495 (647)
.| .|.||+++|| ++||+||+|||+ +..+. ..+ .......|...|+.|++++..++...
T Consensus 271 ~G~~i~Vd~~l~t~~~~~Ifa~GD~~--~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~ 335 (430)
T 3h28_A 271 ANKMVIVNRCFQNPTYKNIFGVGVVT--AIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNN 335 (430)
T ss_dssp TTCCBCCCTTSBCSSSTTEEECSTTB--CCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEecCccccCCCCCCEEEEEeee--ccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCC
Confidence 46 6999999998 999999999997 22211 011 01234567788999999999988654
No 159
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.68 E-value=1.9e-07 Score=103.11 Aligned_cols=63 Identities=8% Similarity=0.157 Sum_probs=46.7
Q ss_pred hHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcccccC
Q 006387 213 GREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIY 284 (647)
Q Consensus 213 g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~~ 284 (647)
...+...|.+.+.+..|++++.+ .|+++..++++ .+++|.. .+|+ .++|+.||.|+|..+.+.
T Consensus 174 r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g---~~~~v~~---~~g~--~i~ad~vV~AdG~~S~~~ 236 (526)
T 2pyx_A 174 AAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHG---DIEKLIT---KQNG--EISGQLFIDCTGAKSLLL 236 (526)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTS---CEEEEEE---SSSC--EEECSEEEECSGGGCCCC
T ss_pred HHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCC---cEEEEEE---CCCC--EEEcCEEEECCCcchHHH
Confidence 45677888888876349999999 59999876454 4555544 3454 389999999999887653
No 160
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.65 E-value=1.9e-07 Score=101.39 Aligned_cols=65 Identities=8% Similarity=-0.053 Sum_probs=45.4
Q ss_pred hHHHHHHHHHHHHcCCCcE--EEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 213 GREIERALLEAVVSDPNIS--VFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 213 g~~~~~~L~~~~~~~~gv~--i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
...+...|.+.+.+. |++ +..++.|+.+..++++ ....|.+.+..+|+..++.++.||+|||.++
T Consensus 100 ~~~l~~~l~~~~~~~-gv~~~i~~~~~V~~v~~~~~~---~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~s 166 (464)
T 2xve_A 100 REVLWDYIKGRVEKA-GVRKYIRFNTAVRHVEFNEDS---QTFTVTVQDHTTDTIYSEEFDYVVCCTGHFS 166 (464)
T ss_dssp HHHHHHHHHHHHHHH-TCGGGEECSEEEEEEEEETTT---TEEEEEEEETTTTEEEEEEESEEEECCCSSS
T ss_pred HHHHHHHHHHHHHHc-CCcceEEeCCEEEEEEEcCCC---CcEEEEEEEcCCCceEEEEcCEEEECCCCCC
Confidence 456666676666663 787 8899999999876432 1233555444456666799999999999654
No 161
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=98.63 E-value=2.8e-07 Score=101.20 Aligned_cols=60 Identities=8% Similarity=0.173 Sum_probs=46.3
Q ss_pred HHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCC---eEEEEEcCeEEECCCccc
Q 006387 219 ALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQ---EVVRFISKVTLLASGGAG 281 (647)
Q Consensus 219 ~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g---~~~~i~Ak~VVlAtGg~~ 281 (647)
+++..+.+++|++|+.++.|++|+.++++ .+++||.+.+. +| +..+|+|+.||||+|++.
T Consensus 231 ~~l~~a~~~~n~~i~~~~~v~~i~~~~~g--~~~~gV~~~~~-~g~~~~~~~~~A~~VIlaaGa~~ 293 (507)
T 1coy_A 231 TYLAQAAATGKLTITTLHRVTKVAPATGS--GYSVTMEQIDE-QGNVVATKVVTADRVFFAAGSVG 293 (507)
T ss_dssp THHHHHHHTTCEEEECSEEEEEEEECSSS--SEEEEEEEECT-TSCEEEEEEEEEEEEEECSHHHH
T ss_pred HHHHHHHhcCCcEEEeCCEEEEEEECCCC--CEEEEEEEeCC-CCcccccEEEEeCEEEEccCccC
Confidence 44455555567999999999999987433 27999988752 45 467899999999999885
No 162
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.63 E-value=1.9e-07 Score=99.99 Aligned_cols=55 Identities=7% Similarity=0.154 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 214 REIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 214 ~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
..+...|.+.+.+. |++|+++++|++|..+ ++ ++ | . .+|+ .+.|+.||+|+|...
T Consensus 189 ~~l~~~l~~~~~~~-G~~i~~~~~V~~i~~~-~~---~v--V---~-~~g~--~~~ad~Vv~a~~~~~ 243 (421)
T 3nrn_A 189 KAVIDELERIIMEN-KGKILTRKEVVEINIE-EK---KV--Y---T-RDNE--EYSFDVAISNVGVRE 243 (421)
T ss_dssp HHHHHHHHHHHHTT-TCEEESSCCEEEEETT-TT---EE--E---E-TTCC--EEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHC-CCEEEcCCeEEEEEEE-CC---EE--E---E-eCCc--EEEeCEEEECCCHHH
Confidence 56888899888874 9999999999999876 44 44 2 2 2344 589999999999653
No 163
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.58 E-value=6.1e-07 Score=97.34 Aligned_cols=37 Identities=16% Similarity=0.263 Sum_probs=33.4
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC------CeEEEEecCCCC
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG------TVAVITKAEPHE 123 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G------~V~llEk~~~~~ 123 (647)
..+||+|||||+||+++|+.|++.| +|+|||+.+..+
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g 71 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR 71 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC
Confidence 4689999999999999999999987 899999988654
No 164
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.56 E-value=2.4e-07 Score=104.99 Aligned_cols=35 Identities=31% Similarity=0.503 Sum_probs=32.5
Q ss_pred cccCEEEECcchHHHHHHHHHHh-----cC-CeEEEEecCC
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAK-----HG-TVAVITKAEP 121 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~-----~G-~V~llEk~~~ 121 (647)
.++||||||||++||++|+.|++ .| +|+||||.+.
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 46899999999999999999999 99 9999999764
No 165
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.55 E-value=2.8e-07 Score=97.98 Aligned_cols=36 Identities=25% Similarity=0.418 Sum_probs=33.2
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCC
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPH 122 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~ 122 (647)
..+||+|||||++|+++|+.|++.| +|+|+||.+..
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 61 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDR 61 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSST
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCc
Confidence 4689999999999999999999999 99999998654
No 166
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.53 E-value=6.4e-07 Score=93.04 Aligned_cols=36 Identities=22% Similarity=0.298 Sum_probs=33.3
Q ss_pred cCEEEECcchHHHHHHHHHHh---cC-CeEEEEecCCCCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAK---HG-TVAVITKAEPHES 124 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~---~G-~V~llEk~~~~~G 124 (647)
+||+|||||++|+++|+.|++ .| +|+|+||....+|
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg 41 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGG 41 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCG
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCcc
Confidence 589999999999999999999 99 9999999886655
No 167
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.52 E-value=3.2e-07 Score=101.32 Aligned_cols=135 Identities=19% Similarity=0.123 Sum_probs=80.6
Q ss_pred cccCEEEECcchHHHHHHHHHH-hcC-CeEEEEecCCCCCCcccc--CCCeeeecCCCCCHHHHHHHHHHhcccCCCHHH
Q 006387 87 KYFDFSVIGSGVAGLCYALEVA-KHG-TVAVITKAEPHESNTNYA--QGGVSAVLCPSDSVESHMQDTIVAGAYLCDDET 162 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa-~~G-~V~llEk~~~~~G~t~~a--~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~ 162 (647)
..+||+|||||+||+++|+.|+ +.| +|+|+|+....+|....+ .|..+...... -.+...+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~-------------~~~~~~~~~ 73 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHL-------------YRFSFDRDL 73 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGG-------------SSCCSCHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcce-------------eeecccccc
Confidence 4689999999999999999999 889 999999987665532211 11111100000 000000000
Q ss_pred HHHHHHHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCc--EEEcceEEEE
Q 006387 163 VRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNI--SVFEHHFAID 240 (647)
Q Consensus 163 ~~~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv--~i~~~~~v~~ 240 (647)
...++. . ... ..+..+...+.+.+.+. ++ .+..++.|++
T Consensus 74 --------------~~~~~~--~------------------~~~----~~~~ei~~~l~~~~~~~-g~~~~i~~~~~V~~ 114 (540)
T 3gwf_A 74 --------------LQESTW--K------------------TTY----ITQPEILEYLEDVVDRF-DLRRHFKFGTEVTS 114 (540)
T ss_dssp --------------HHHCCC--S------------------BSE----EEHHHHHHHHHHHHHHT-TCGGGEEESCCEEE
T ss_pred --------------ccCCCC--c------------------ccC----CCHHHHHHHHHHHHHHc-CCcceeEeccEEEE
Confidence 001110 0 000 12456666666666664 77 8999999999
Q ss_pred EEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 241 LLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 241 l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
+..++++ ....|. ..+|+ ++.|+.||+|||.++
T Consensus 115 i~~~~~~---~~~~V~---~~~G~--~i~ad~lV~AtG~~s 147 (540)
T 3gwf_A 115 ALYLDDE---NLWEVT---TDHGE--VYRAKYVVNAVGLLS 147 (540)
T ss_dssp EEEETTT---TEEEEE---ETTSC--EEEEEEEEECCCSCC
T ss_pred EEEeCCC---CEEEEE---EcCCC--EEEeCEEEECCcccc
Confidence 9877543 222232 24565 589999999999754
No 168
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.51 E-value=1.3e-06 Score=94.23 Aligned_cols=39 Identities=18% Similarity=0.281 Sum_probs=34.1
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC---CeEEEEecCCCCCC
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG---TVAVITKAEPHESN 125 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G---~V~llEk~~~~~G~ 125 (647)
..+||+|||||++|++||+.|++.| +|+|+|+....+|.
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~ 46 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGV 46 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTT
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCe
Confidence 3589999999999999999999998 69999998766553
No 169
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.50 E-value=2.9e-07 Score=101.94 Aligned_cols=39 Identities=28% Similarity=0.436 Sum_probs=34.7
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G 124 (647)
...+||+|||||+||+++|+.|++.| +|+|||+....+|
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG 58 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGG 58 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCC
Confidence 34689999999999999999999999 9999999876654
No 170
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.49 E-value=4.6e-07 Score=94.96 Aligned_cols=33 Identities=27% Similarity=0.566 Sum_probs=31.3
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC--CeEEEEecC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAE 120 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~~ 120 (647)
++||+|||||+||+++|+.|++.| +|+|||+..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC
Confidence 589999999999999999999998 699999987
No 171
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.48 E-value=9.6e-07 Score=94.75 Aligned_cols=39 Identities=26% Similarity=0.434 Sum_probs=35.4
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCcc
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTN 127 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~ 127 (647)
+||+|||||++|++||+.|++.| +|+|||+....||.+.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 41 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAY 41 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCC
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeec
Confidence 79999999999999999999999 9999999877766553
No 172
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.48 E-value=5e-07 Score=100.13 Aligned_cols=39 Identities=28% Similarity=0.392 Sum_probs=35.3
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G 124 (647)
..++||+|||||++|+++|+.|++.| +|+|+|+....+|
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG 53 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGG 53 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCC
Confidence 34689999999999999999999999 9999999876655
No 173
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.47 E-value=5.7e-07 Score=96.68 Aligned_cols=58 Identities=7% Similarity=0.067 Sum_probs=39.3
Q ss_pred CceEECCCCC-cccCceeecccccCCCCCCCC-c-c-ch--hhhHHHHHHHHHHHHHHHHhhhccc
Q 006387 437 GGVRAGLQGE-TNVRGLYVAGEVACTGLHGAN-R-L-AS--NSLLEALVFARRAVQPSIDHKKSTS 496 (647)
Q Consensus 437 GGi~vD~~~~-T~ipGLyAaGe~a~~g~~Ga~-r-l-~g--~sl~~a~v~G~~Ag~~a~~~~~~~~ 496 (647)
|.|.||+++| |+.|++||+|||+ .+...+ + + .+ .+-..|.-.|+.+|++++..++..+
T Consensus 273 g~i~vd~~lq~t~~~~IfAiGD~a--~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g~~ 336 (430)
T 3hyw_A 273 KMVIVNRCFQNPTYKNIFGVGVVT--AIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNP 336 (430)
T ss_dssp CCBCCCTTSBCSSSTTEEECSTTB--CCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred eEEEecccccCCCCCCEEEeccEE--ecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4588999999 8999999999997 232111 0 0 01 1123466788999999988776543
No 174
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.45 E-value=1e-07 Score=94.56 Aligned_cols=38 Identities=26% Similarity=0.459 Sum_probs=35.1
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESN 125 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~ 125 (647)
++||+|||||||||+||+.|+++| +|+|+||.+..||.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~ 40 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGR 40 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCc
Confidence 489999999999999999999999 99999999877653
No 175
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.39 E-value=3.3e-06 Score=89.67 Aligned_cols=54 Identities=19% Similarity=0.139 Sum_probs=38.6
Q ss_pred cCceEECCC-CC-cccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhhcc
Q 006387 436 CGGVRAGLQ-GE-TNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKST 495 (647)
Q Consensus 436 ~GGi~vD~~-~~-T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~~ 495 (647)
.|.|.||++ .| |+.||+||+|||+ ++.. . ...-..|.-.|+.++++++..++..
T Consensus 271 ~G~i~VD~~tl~~t~~p~VfAiGDva-~~~~--~---pk~a~~A~~qa~v~A~ni~~~l~G~ 326 (401)
T 3vrd_B 271 SGWCPVDIRTFESSLQPGIHVIGDAC-NAAP--M---PKSAYSANSQAKVAAAAVVALLKGE 326 (401)
T ss_dssp TSSBCBCTTTCBBSSSTTEEECGGGB-CCTT--S---CBSHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCEEECCCcceecCCCCEEEecccc-cCCC--C---CchHHHHHHHHHHHHHHHHHHhcCC
Confidence 467999987 44 8899999999997 3321 1 1122346677999999998887654
No 176
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.39 E-value=7.1e-07 Score=98.69 Aligned_cols=38 Identities=32% Similarity=0.428 Sum_probs=34.6
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G 124 (647)
..+||+|||||+||+++|+.|++.| +|+|||+....+|
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GG 46 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGG 46 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCC
Confidence 4689999999999999999999999 9999999876654
No 177
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.37 E-value=7.8e-06 Score=93.72 Aligned_cols=38 Identities=26% Similarity=0.391 Sum_probs=35.1
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G 124 (647)
..+||+|||+|++|++||+.|++.| +|+|+|+....+|
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 4689999999999999999999999 9999999887766
No 178
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.33 E-value=1.8e-06 Score=91.57 Aligned_cols=34 Identities=29% Similarity=0.682 Sum_probs=31.1
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPH 122 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~ 122 (647)
..|+|||||++||++|+.|+++| +|+|+||.+..
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 36999999999999999999999 99999997643
No 179
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.26 E-value=1.7e-06 Score=94.12 Aligned_cols=39 Identities=18% Similarity=0.340 Sum_probs=35.1
Q ss_pred cCEEEECcchHHHHHHHHHHhcC---CeEEEEecCCCCCCcc
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG---TVAVITKAEPHESNTN 127 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G---~V~llEk~~~~~G~t~ 127 (647)
.||+|||||++||+||++|+++| +|+|+|+....||.+.
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~ 44 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIR 44 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCC
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceE
Confidence 69999999999999999999998 5999999888777553
No 180
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.17 E-value=1.1e-05 Score=91.82 Aligned_cols=41 Identities=20% Similarity=0.217 Sum_probs=36.2
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCc
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNT 126 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t 126 (647)
...+||+|||||+||++||+.|+++| +|+|+|+....+|..
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~ 430 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRV 430 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHH
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEe
Confidence 34689999999999999999999999 999999988766543
No 181
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.13 E-value=3.3e-05 Score=84.53 Aligned_cols=69 Identities=19% Similarity=0.157 Sum_probs=48.3
Q ss_pred hHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCC---CeEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006387 213 GREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPD---AVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 213 g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~---~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~ 282 (647)
..++..-|...+.+ .+..|.++++|+++..++.+.. ....-|...+..+|+..++.|+.||+|||+.+.
T Consensus 144 r~E~~~Yl~~~A~~-~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~P~ 215 (501)
T 4b63_A 144 RLEFEDYMRWCAQQ-FSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGTAK 215 (501)
T ss_dssp HHHHHHHHHHHHHT-TGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCEEC
T ss_pred HHHHHHHHHHHHHH-cCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCCCC
Confidence 34566666555554 4677899999999986533210 123456667777888889999999999997654
No 182
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.09 E-value=6.9e-06 Score=89.29 Aligned_cols=38 Identities=16% Similarity=0.303 Sum_probs=34.3
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC---CeEEEEecCCCCCC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG---TVAVITKAEPHESN 125 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G---~V~llEk~~~~~G~ 125 (647)
.+||+|||||++|++||+.|++.| +|+|+|+....+|.
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~ 44 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGK 44 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTT
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCce
Confidence 579999999999999999999987 79999998877663
No 183
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.08 E-value=1.7e-06 Score=94.88 Aligned_cols=41 Identities=24% Similarity=0.285 Sum_probs=37.2
Q ss_pred ccccCEEEECcchHHHHHHHHHHhc-C-CeEEEEecCCCCCCc
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKH-G-TVAVITKAEPHESNT 126 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~-G-~V~llEk~~~~~G~t 126 (647)
..++||||||||++||+||+.|+++ | +|+|+|+.+..||..
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~ 50 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLA 50 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGG
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCe
Confidence 4579999999999999999999985 8 999999999988854
No 184
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.93 E-value=6.2e-06 Score=89.17 Aligned_cols=58 Identities=12% Similarity=0.047 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHcCCCcEEEcceEEEEEEecC-CCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 214 REIERALLEAVVSDPNISVFEHHFAIDLLTTL-DGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 214 ~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~-~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
..+..+|.+.+++. |++|+.+++|++|..+. ++ ++.||.. +|+ .+.|+.||+|+|.++
T Consensus 242 ~~l~~al~~~~~~~-G~~i~~~~~V~~i~~~~~~~---~~~~V~~----~g~--~~~ad~VV~a~~~~~ 300 (453)
T 2bcg_G 242 GELPQGFARLSAIY-GGTYMLDTPIDEVLYKKDTG---KFEGVKT----KLG--TFKAPLVIADPTYFP 300 (453)
T ss_dssp THHHHHHHHHHHHT-TCEEECSCCCCEEEEETTTT---EEEEEEE----TTE--EEECSCEEECGGGCG
T ss_pred HHHHHHHHHHHHHc-CCEEECCCEEEEEEEECCCC---eEEEEEE----CCe--EEECCEEEECCCccc
Confidence 36888899888874 99999999999998762 34 6777754 254 589999999999764
No 185
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.86 E-value=0.0001 Score=75.16 Aligned_cols=100 Identities=16% Similarity=0.209 Sum_probs=73.5
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHHHHH
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
-.|+|||+|..|+-.|..+++.| +|.++++.+.... +
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~----------------------------------~-------- 183 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA----------------------------------E-------- 183 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCC----------------------------------C--------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcccc----------------------------------C--------
Confidence 46999999999999999999999 9999987653210 0
Q ss_pred HHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006387 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
..+...+.+.+++ .||+++.++.++++..+ ++
T Consensus 184 ----------------------------------------------~~~~~~l~~~l~~-~gv~i~~~~~v~~i~~~-~~ 215 (320)
T 1trb_A 184 ----------------------------------------------KILIKRLMDKVEN-GNIILHTNRTLEEVTGD-QM 215 (320)
T ss_dssp ----------------------------------------------HHHHHHHHHHHHT-SSEEEECSCEEEEEEEC-SS
T ss_pred ----------------------------------------------HHHHHHHHHhccc-CCeEEEcCceeEEEEcC-CC
Confidence 0122334445555 59999999999999875 33
Q ss_pred CCCeEEEEEEEecCC-CeEEEEEcCeEEECCCccc
Q 006387 248 PDAVCHGVDTLNVET-QEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~-g~~~~i~Ak~VVlAtGg~~ 281 (647)
++.++.+.+..+ |+...+.++.||+|+|-.+
T Consensus 216 ---~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 216 ---GVTGVRLRDTQNSDNIESLDVAGLFVAIGHSP 247 (320)
T ss_dssp ---SEEEEEEECCTTCCCCEEEECSEEEECSCEEE
T ss_pred ---ceEEEEEEeccCCCceEEEEcCEEEEEeCCCC
Confidence 577887765333 5445799999999999543
No 186
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.82 E-value=1.1e-05 Score=85.12 Aligned_cols=42 Identities=29% Similarity=0.479 Sum_probs=37.5
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCcc
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTN 127 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~ 127 (647)
...+||+|||||++|++||+.|++.| +|+|+|+.+..||...
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 69 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAY 69 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGC
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccc
Confidence 35689999999999999999999999 9999999887776554
No 187
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.77 E-value=0.00023 Score=72.24 Aligned_cols=54 Identities=7% Similarity=0.033 Sum_probs=41.8
Q ss_pred HHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 224 VVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 224 ~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
+.+..||+++.++.++++..+ ++ ++.++.+.+..+|+...+.++.||+|+|-.+
T Consensus 189 l~~~~gv~v~~~~~v~~i~~~-~~---~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 242 (310)
T 1fl2_A 189 LRSLKNVDIILNAQTTEVKGD-GS---KVVGLEYRDRVSGDIHNIELAGIFVQIGLLP 242 (310)
T ss_dssp HHTCTTEEEESSEEEEEEEES-SS---SEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred HhhCCCeEEecCCceEEEEcC-CC---cEEEEEEEECCCCcEEEEEcCEEEEeeCCcc
Confidence 333359999999999999865 34 6778888765567767899999999998543
No 188
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.76 E-value=0.00023 Score=73.02 Aligned_cols=97 Identities=14% Similarity=0.168 Sum_probs=74.8
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHHHHH
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
-.|+|||+|..|+-+|..+++.| +|.++++......
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~------------------------------------------- 210 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------------------------------------------- 210 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC-------------------------------------------
Confidence 46999999999999999999999 9999997653210
Q ss_pred HHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006387 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
...+.+.+.+..||+++.++.+.++..+ ++
T Consensus 211 -------------------------------------------------~~~~~~~l~~~~gv~i~~~~~v~~i~~~-~~ 240 (338)
T 3itj_A 211 -------------------------------------------------STIMQKRAEKNEKIEILYNTVALEAKGD-GK 240 (338)
T ss_dssp -------------------------------------------------CHHHHHHHHHCTTEEEECSEEEEEEEES-SS
T ss_pred -------------------------------------------------CHHHHHHHHhcCCeEEeecceeEEEEcc-cC
Confidence 0112233333349999999999999876 33
Q ss_pred CCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 248 PDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
++.++.+.+..+|+...+.++.||+|+|-.+
T Consensus 241 ---~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 271 (338)
T 3itj_A 241 ---LLNALRIKNTKKNEETDLPVSGLFYAIGHTP 271 (338)
T ss_dssp ---SEEEEEEEETTTTEEEEEECSEEEECSCEEE
T ss_pred ---cEEEEEEEECCCCceEEEEeCEEEEEeCCCC
Confidence 5888888876677777899999999999544
No 189
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.76 E-value=0.00025 Score=77.06 Aligned_cols=102 Identities=18% Similarity=0.192 Sum_probs=71.4
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHHHHH
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
-.|+|||||..|+-+|..+++.| +|+|+++.+..... .+
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------~~-------- 223 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS--------------------------------MD-------- 223 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS--------------------------------SC--------
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc--------------------------------cC--------
Confidence 47999999999999999999999 99999987632110 00
Q ss_pred HHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006387 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
..+...+.+.+++ .||+++.++.++++..++++
T Consensus 224 ----------------------------------------------~~~~~~l~~~l~~-~gv~i~~~~~v~~i~~~~~~ 256 (478)
T 1v59_A 224 ----------------------------------------------GEVAKATQKFLKK-QGLDFKLSTKVISAKRNDDK 256 (478)
T ss_dssp ----------------------------------------------HHHHHHHHHHHHH-TTCEEECSEEEEEEEEETTT
T ss_pred ----------------------------------------------HHHHHHHHHHHHH-CCCEEEeCCEEEEEEEecCC
Confidence 1222344555566 49999999999999862122
Q ss_pred CCCeEEEEEEEecCCCeEEEEEcCeEEECCCcc
Q 006387 248 PDAVCHGVDTLNVETQEVVRFISKVTLLASGGA 280 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~ 280 (647)
....+...+..+|+...+.++.||+|+|-.
T Consensus 257 ---~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 286 (478)
T 1v59_A 257 ---NVVEIVVEDTKTNKQENLEAEVLLVAVGRR 286 (478)
T ss_dssp ---TEEEEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred ---CeEEEEEEEcCCCCceEEECCEEEECCCCC
Confidence 234455443334555579999999999943
No 190
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.74 E-value=1.7e-05 Score=84.27 Aligned_cols=41 Identities=34% Similarity=0.440 Sum_probs=37.1
Q ss_pred cccCEEEECcchHHHHHHHHHHhc-C-CeEEEEecCCCCCCcc
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKH-G-TVAVITKAEPHESNTN 127 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~-G-~V~llEk~~~~~G~t~ 127 (647)
.++||+|||||++||+||+.|++. | +|+|+|+.+..||.+.
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~ 48 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAY 48 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeee
Confidence 368999999999999999999999 9 9999999988877653
No 191
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.72 E-value=1.9e-05 Score=85.16 Aligned_cols=40 Identities=33% Similarity=0.457 Sum_probs=36.4
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCc
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNT 126 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t 126 (647)
.++||+|||||++||+||+.|++.| +|+|+|+....||..
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~ 44 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRT 44 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCce
Confidence 4689999999999999999999999 999999988777654
No 192
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.70 E-value=2.1e-05 Score=85.73 Aligned_cols=40 Identities=33% Similarity=0.523 Sum_probs=36.8
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCc
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNT 126 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t 126 (647)
..+||+|||||++||+||+.|++.| +|+|+|+....||.+
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRV 50 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCce
Confidence 4689999999999999999999999 999999998888754
No 193
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.69 E-value=1.9e-05 Score=82.80 Aligned_cols=38 Identities=34% Similarity=0.518 Sum_probs=35.2
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCc
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNT 126 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t 126 (647)
+||+|||||++|++||+.|++.| +|+|+|+....||.+
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~ 40 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNA 40 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGG
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcce
Confidence 79999999999999999999999 999999988777754
No 194
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.68 E-value=2.7e-05 Score=85.67 Aligned_cols=39 Identities=26% Similarity=0.425 Sum_probs=35.9
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCc
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNT 126 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t 126 (647)
.+||+|||||+|||+||+.|++.| +|+|+|+.+..||.+
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~ 43 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRT 43 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCce
Confidence 579999999999999999999999 999999998877754
No 195
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.67 E-value=0.00026 Score=72.21 Aligned_cols=50 Identities=14% Similarity=0.069 Sum_probs=39.7
Q ss_pred CCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 228 PNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 228 ~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
.||+++.++.++++..+ ++ ++.++.+.+..+|+...+.++.||+|+|-.+
T Consensus 203 ~gv~i~~~~~v~~i~~~-~~---~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 252 (319)
T 3cty_A 203 RNIPYIMNAQVTEIVGD-GK---KVTGVKYKDRTTGEEKLIETDGVFIYVGLIP 252 (319)
T ss_dssp TTCCEECSEEEEEEEES-SS---SEEEEEEEETTTCCEEEECCSEEEECCCEEE
T ss_pred CCcEEEcCCeEEEEecC-Cc---eEEEEEEEEcCCCceEEEecCEEEEeeCCcc
Confidence 49999999999999865 33 5778887654567766799999999998543
No 196
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.66 E-value=0.00049 Score=69.79 Aligned_cols=50 Identities=10% Similarity=0.037 Sum_probs=39.3
Q ss_pred CCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 228 PNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 228 ~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
.||+++.++.++++..+ ++ ++.++.+.+..+|+...+.++.||+|+|-.+
T Consensus 192 ~gv~v~~~~~v~~i~~~-~~---~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 241 (311)
T 2q0l_A 192 DKIEFLTPYVVEEIKGD-AS---GVSSLSIKNTATNEKRELVVPGFFIFVGYDV 241 (311)
T ss_dssp TTEEEETTEEEEEEEEE-TT---EEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred CCeEEEeCCEEEEEECC-CC---cEeEEEEEecCCCceEEEecCEEEEEecCcc
Confidence 59999999999999865 33 5667777654467766799999999999544
No 197
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.65 E-value=2.9e-05 Score=84.38 Aligned_cols=40 Identities=18% Similarity=0.395 Sum_probs=35.3
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCc
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNT 126 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t 126 (647)
..+||+|||||++||+||+.|++.| +|+|+|+....||.+
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~ 55 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAV 55 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee
Confidence 4689999999999999999999999 999999998877644
No 198
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.64 E-value=3.1e-05 Score=80.98 Aligned_cols=40 Identities=18% Similarity=0.310 Sum_probs=35.6
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEec-CCCCCCc
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKA-EPHESNT 126 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~-~~~~G~t 126 (647)
..+||+|||||++||+||+.|++.| +|+|+|+. ...||..
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~ 84 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRI 84 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCce
Confidence 4689999999999999999999999 99999998 7666543
No 199
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.64 E-value=0.00046 Score=70.53 Aligned_cols=51 Identities=16% Similarity=0.228 Sum_probs=39.6
Q ss_pred cCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 226 SDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 226 ~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
+..||+++.++.++++..+ + ++.++.+.+..+|+...+.++.||+|+|-.+
T Consensus 199 ~~~gv~i~~~~~v~~i~~~--~---~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 249 (325)
T 2q7v_A 199 ANPKMKFIWDTAVEEIQGA--D---SVSGVKLRNLKTGEVSELATDGVFIFIGHVP 249 (325)
T ss_dssp TCTTEEEECSEEEEEEEES--S---SEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred hcCCceEecCCceEEEccC--C---cEEEEEEEECCCCcEEEEEcCEEEEccCCCC
Confidence 3359999999999999864 3 5778887654567766799999999998443
No 200
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.63 E-value=3e-05 Score=83.49 Aligned_cols=58 Identities=9% Similarity=0.067 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcc
Q 006387 214 REIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGA 280 (647)
Q Consensus 214 ~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~ 280 (647)
..+..+|.+.+++. |++|+.++.|++|..++++ ++.||.. .+|+ +++|+.||.|+|-+
T Consensus 256 ~~L~~aL~r~~~~~-Gg~i~l~t~V~~I~~d~~g---~v~gV~~---~~G~--~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAIN-GGTFMLNKNVVDFVFDDDN---KVCGIKS---SDGE--IAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC---CEESSCCEEEEEECTTS---CEEEEEE---TTSC--EEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHc-CCEEEeCCeEEEEEEecCC---eEEEEEE---CCCc--EEECCEEEECCCcc
Confidence 46888999999885 9999999999999984455 7888865 3465 48999999999854
No 201
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.61 E-value=0.00031 Score=75.96 Aligned_cols=33 Identities=27% Similarity=0.341 Sum_probs=30.3
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+|||||..|+-+|..+++.| +|+|+|+.+.
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 203 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPE 203 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCc
Confidence 47999999999999999999999 9999998653
No 202
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.61 E-value=0.00044 Score=73.52 Aligned_cols=98 Identities=14% Similarity=0.132 Sum_probs=72.4
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHHHHH
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
-.|+|||+|..|+-+|..+++.| +|+++++.+...... .
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~-------------------------------~--------- 192 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARV-------------------------------A--------- 192 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT-------------------------------S---------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhh-------------------------------c---------
Confidence 46999999999999999999999 999999876421100 0
Q ss_pred HHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006387 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
+..+...+.+.+++ .||+++.++.|+++..+ ++
T Consensus 193 ---------------------------------------------~~~~~~~l~~~l~~-~GV~i~~~~~v~~i~~~-~~ 225 (415)
T 3lxd_A 193 ---------------------------------------------GEALSEFYQAEHRA-HGVDLRTGAAMDCIEGD-GT 225 (415)
T ss_dssp ---------------------------------------------CHHHHHHHHHHHHH-TTCEEEETCCEEEEEES-SS
T ss_pred ---------------------------------------------CHHHHHHHHHHHHh-CCCEEEECCEEEEEEec-CC
Confidence 11233445555566 49999999999999875 44
Q ss_pred CCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 248 PDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
++.+|.. .+|+ .+.|+.||+|+|-.+
T Consensus 226 ---~v~~v~l---~dG~--~i~aD~Vv~a~G~~p 251 (415)
T 3lxd_A 226 ---KVTGVRM---QDGS--VIPADIVIVGIGIVP 251 (415)
T ss_dssp ---BEEEEEE---SSSC--EEECSEEEECSCCEE
T ss_pred ---cEEEEEe---CCCC--EEEcCEEEECCCCcc
Confidence 6777765 3454 589999999999543
No 203
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.60 E-value=0.00045 Score=73.21 Aligned_cols=98 Identities=18% Similarity=0.202 Sum_probs=72.4
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHHHHH
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
-.|+|||+|..|+-+|..+++.| +|+++++.+...... .
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~-------------------------------~--------- 182 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARV-------------------------------V--------- 182 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT-------------------------------S---------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhc-------------------------------c---------
Confidence 46999999999999999999999 999999865321000 0
Q ss_pred HHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006387 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
+..+...+.+.+++ .||+++.++.|.++..+ ++
T Consensus 183 ---------------------------------------------~~~~~~~l~~~l~~-~GV~i~~~~~v~~i~~~-~~ 215 (404)
T 3fg2_P 183 ---------------------------------------------TPEISSYFHDRHSG-AGIRMHYGVRATEIAAE-GD 215 (404)
T ss_dssp ---------------------------------------------CHHHHHHHHHHHHH-TTCEEECSCCEEEEEEE-TT
T ss_pred ---------------------------------------------CHHHHHHHHHHHHh-CCcEEEECCEEEEEEec-CC
Confidence 11233445555666 49999999999999876 44
Q ss_pred CCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 248 PDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
++.+|.. .+|+ .+.|+.||+|+|-.+
T Consensus 216 ---~v~~V~~---~dG~--~i~aD~Vv~a~G~~p 241 (404)
T 3fg2_P 216 ---RVTGVVL---SDGN--TLPCDLVVVGVGVIP 241 (404)
T ss_dssp ---EEEEEEE---TTSC--EEECSEEEECCCEEE
T ss_pred ---cEEEEEe---CCCC--EEEcCEEEECcCCcc
Confidence 6777765 4565 589999999999543
No 204
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.60 E-value=3.4e-05 Score=84.81 Aligned_cols=41 Identities=22% Similarity=0.298 Sum_probs=36.8
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC--CeEEEEecCCCCCCc
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPHESNT 126 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~~~~~G~t 126 (647)
+..+||+|||||+|||+||+.|++.| +|+|+|+....||..
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCce
Confidence 34689999999999999999999998 899999999887754
No 205
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.60 E-value=0.00066 Score=73.85 Aligned_cols=98 Identities=14% Similarity=0.072 Sum_probs=71.1
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHHHHH
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
-.|+|||+|..|+-.|..+++.| +|+++++...... .++
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~~---------------------------------~d~------- 225 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLRG---------------------------------FDQ------- 225 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTT---------------------------------SCH-------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccccc---------------------------------CCH-------
Confidence 36999999999999999999999 9999997532110 011
Q ss_pred HHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006387 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
.+...+.+.+++ .||+++.++.+.++...+++
T Consensus 226 -----------------------------------------------~~~~~l~~~l~~-~gv~~~~~~~v~~i~~~~~~ 257 (488)
T 3dgz_A 226 -----------------------------------------------QMSSLVTEHMES-HGTQFLKGCVPSHIKKLPTN 257 (488)
T ss_dssp -----------------------------------------------HHHHHHHHHHHH-TTCEEEETEEEEEEEECTTS
T ss_pred -----------------------------------------------HHHHHHHHHHHH-CCCEEEeCCEEEEEEEcCCC
Confidence 222344455555 49999999999999875343
Q ss_pred CCCeEEEEEEEecCCCeEEEEEcCeEEECCC
Q 006387 248 PDAVCHGVDTLNVETQEVVRFISKVTLLASG 278 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtG 278 (647)
.+ .+...+..+|+...+.++.||+|+|
T Consensus 258 ---~~-~v~~~~~~~g~~~~~~~D~vi~a~G 284 (488)
T 3dgz_A 258 ---QL-QVTWEDHASGKEDTGTFDTVLWAIG 284 (488)
T ss_dssp ---CE-EEEEEETTTTEEEEEEESEEEECSC
T ss_pred ---cE-EEEEEeCCCCeeEEEECCEEEEccc
Confidence 23 3555554557766789999999999
No 206
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.58 E-value=0.0011 Score=71.39 Aligned_cols=146 Identities=11% Similarity=0.031 Sum_probs=82.4
Q ss_pred ccCEEEECcchHHHHHHHHHHhc--C-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHH
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKH--G-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVR 164 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~--G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~ 164 (647)
.-.|+|||+|..|+-+|..|++. + +|.++++...... .++++.. ....++....
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p--------------~~~~~~~---------~~~~~p~~~~ 283 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKP--------------ADDSPFV---------NEVFAPKFTD 283 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCB--------------CCCCHHH---------HGGGSHHHHH
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcC--------------ccCCccc---------hhccChhHHH
Confidence 35799999999999999999998 7 9999998763210 0111110 0112344443
Q ss_pred HHHHHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHH-HHHHHcCCCcEEEcceEEEEEEe
Q 006387 165 VVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERAL-LEAVVSDPNISVFEHHFAIDLLT 243 (647)
Q Consensus 165 ~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L-~~~~~~~~gv~i~~~~~v~~l~~ 243 (647)
.+.....+.-..+.+.-... ...++. ++ .-..+...+ .+.+....||+++.++.|+++..
T Consensus 284 ~~~~l~~~~~~~~~~~~~~~-----------~~~~~~-~~-------~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~ 344 (463)
T 3s5w_A 284 LIYSREHAERERLLREYHNT-----------NYSVVD-TD-------LIERIYGVFYRQKVSGIPRHAFRCMTTVERATA 344 (463)
T ss_dssp HHHHSCHHHHHHHHHHTGGG-----------TSSCBC-HH-------HHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEE
T ss_pred HHhcCCHHHHHHHHHHhhcc-----------CCCcCC-HH-------HHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEe
Confidence 33332222222221110000 000000 00 011122222 33344446999999999999987
Q ss_pred cCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcc
Q 006387 244 TLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGA 280 (647)
Q Consensus 244 ~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~ 280 (647)
+ ++ . ..+.+.+..+|+..++.+|.||+|||-.
T Consensus 345 ~-~~---~-~~v~~~~~~~g~~~~~~~D~Vv~AtG~~ 376 (463)
T 3s5w_A 345 T-AQ---G-IELALRDAGSGELSVETYDAVILATGYE 376 (463)
T ss_dssp E-TT---E-EEEEEEETTTCCEEEEEESEEEECCCEE
T ss_pred c-CC---E-EEEEEEEcCCCCeEEEECCEEEEeeCCC
Confidence 5 33 2 3466666667887789999999999944
No 207
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.58 E-value=0.0005 Score=74.09 Aligned_cols=33 Identities=27% Similarity=0.419 Sum_probs=30.3
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-+|+|||+|..|+-+|..+++.| +|+|+|+.+.
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 204 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGE 204 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 57999999999999999999999 9999998653
No 208
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.57 E-value=6.1e-05 Score=80.78 Aligned_cols=57 Identities=12% Similarity=0.061 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 214 REIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 214 ~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
..+..+|.+.+++. |++|+.+++|++|..+ ++ ++.++.. +|+ .++|+.||+|+|.+.
T Consensus 234 ~~l~~~l~~~~~~~-G~~i~~~~~V~~I~~~-~~---~v~~v~~----~g~--~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 234 GELPQGFARLSAIY-GGTYMLNKPVDDIIME-NG---KVVGVKS----EGE--VARCKQLICDPSYVP 290 (433)
T ss_dssp THHHHHHHHHHHHH-TCCCBCSCCCCEEEEE-TT---EEEEEEE----TTE--EEECSEEEECGGGCG
T ss_pred HHHHHHHHHHHHHc-CCEEECCCEEEEEEEe-CC---EEEEEEE----CCe--EEECCEEEECCCCCc
Confidence 46888888888774 9999999999999876 45 6777652 354 589999999999765
No 209
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.57 E-value=5.7e-05 Score=80.61 Aligned_cols=40 Identities=20% Similarity=0.402 Sum_probs=36.0
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC--CeEEEEecCCCCCCc
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPHESNT 126 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~~~~~G~t 126 (647)
..+||+|||||++||+||+.|++.| +|+|+|+.+..||.+
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~ 46 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKC 46 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcc
Confidence 3589999999999999999999998 899999998877754
No 210
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.56 E-value=3.9e-05 Score=83.74 Aligned_cols=39 Identities=21% Similarity=0.367 Sum_probs=35.8
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCc
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNT 126 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t 126 (647)
++||+|||||++||+||+.|++.| +|+|+|+.+..||.+
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~ 78 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRS 78 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcc
Confidence 489999999999999999999999 999999998777654
No 211
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.55 E-value=0.00061 Score=74.83 Aligned_cols=100 Identities=15% Similarity=0.247 Sum_probs=72.1
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHHHHH
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
-.|+|||+|..|+-.|..+++.| +|+++++.+..... .+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~--------------------------------~~-------- 254 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI--------------------------------KD-------- 254 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC--------------------------------CS--------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc--------------------------------cc--------
Confidence 57999999999999999999999 99999986532100 00
Q ss_pred HHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006387 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
..+...+.+.+++ .||+++.++.|+++..++++
T Consensus 255 ----------------------------------------------~~~~~~l~~~l~~-~GV~i~~~~~V~~i~~~~~~ 287 (523)
T 1mo9_A 255 ----------------------------------------------NETRAYVLDRMKE-QGMEIISGSNVTRIEEDANG 287 (523)
T ss_dssp ----------------------------------------------HHHHHHHHHHHHH-TTCEEESSCEEEEEEECTTS
T ss_pred ----------------------------------------------HHHHHHHHHHHHh-CCcEEEECCEEEEEEEcCCC
Confidence 1233445566666 49999999999999875444
Q ss_pred CCCeEEEEEEEecCCCeEEEEEcCeEEECCCcc
Q 006387 248 PDAVCHGVDTLNVETQEVVRFISKVTLLASGGA 280 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~ 280 (647)
++.++.+.. .+|+ ..+.|+.||+|+|-.
T Consensus 288 ---~v~~~~v~~-~~G~-~~i~aD~Vv~A~G~~ 315 (523)
T 1mo9_A 288 ---RVQAVVAMT-PNGE-MRIETDFVFLGLGEQ 315 (523)
T ss_dssp ---BEEEEEEEE-TTEE-EEEECSCEEECCCCE
T ss_pred ---ceEEEEEEE-CCCc-EEEEcCEEEECcCCc
Confidence 565554432 3454 368999999999943
No 212
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.54 E-value=0.00049 Score=75.57 Aligned_cols=54 Identities=9% Similarity=0.046 Sum_probs=42.5
Q ss_pred HHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 224 VVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 224 ~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
+.+..||+++.++.++++..+ ++ ++.++.+.+..+|+...+.++.||+|+|-.+
T Consensus 400 l~~~~gV~v~~~~~v~~i~~~-~~---~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 453 (521)
T 1hyu_A 400 VRSLKNVDIILNAQTTEVKGD-GS---KVVGLEYRDRVSGDIHSVALAGIFVQIGLLP 453 (521)
T ss_dssp HTTCTTEEEECSEEEEEEEEC-SS---SEEEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred HhcCCCcEEEeCCEEEEEEcC-CC---cEEEEEEEeCCCCceEEEEcCEEEECcCCCC
Confidence 333359999999999999865 34 6888888776667777899999999999543
No 213
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.54 E-value=0.00043 Score=71.92 Aligned_cols=49 Identities=14% Similarity=0.106 Sum_probs=38.2
Q ss_pred HHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCC
Q 006387 224 VVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASG 278 (647)
Q Consensus 224 ~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtG 278 (647)
.++ .||+++.++.++++..+ ++ ++.+|.+. ..+|+...+.++.||+|+|
T Consensus 212 ~~~-~gv~i~~~~~v~~i~~~-~~---~v~~v~~~-~~~g~~~~i~~D~vi~a~G 260 (360)
T 3ab1_A 212 RAN-GTIDVYLETEVASIEES-NG---VLTRVHLR-SSDGSKWTVEADRLLILIG 260 (360)
T ss_dssp HHH-TSEEEESSEEEEEEEEE-TT---EEEEEEEE-ETTCCEEEEECSEEEECCC
T ss_pred hhc-CceEEEcCcCHHHhccC-CC---ceEEEEEE-ecCCCeEEEeCCEEEECCC
Confidence 344 48999999999999875 44 67777765 3456656799999999999
No 214
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.53 E-value=4e-05 Score=82.19 Aligned_cols=34 Identities=29% Similarity=0.454 Sum_probs=31.0
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
..+||+|||||++|+++|+.|++.| +|+||||..
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3579999999999999999999999 999999976
No 215
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.52 E-value=0.00078 Score=69.05 Aligned_cols=99 Identities=13% Similarity=0.159 Sum_probs=72.1
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHHHHH
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
-.|+|||+|..|+-.|..+++.| +|.++++.+.... .+
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~----------------------------------~~------- 191 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA----------------------------------HE------- 191 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS----------------------------------CH-------
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc----------------------------------cH-------
Confidence 47999999999999999999999 9999998653210 00
Q ss_pred HHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006387 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
.....|.+.+++ .||+++.++.+.++..+ +
T Consensus 192 -----------------------------------------------~~~~~l~~~l~~-~gv~v~~~~~v~~i~~~--~ 221 (335)
T 2zbw_A 192 -----------------------------------------------ASVKELMKAHEE-GRLEVLTPYELRRVEGD--E 221 (335)
T ss_dssp -----------------------------------------------HHHHHHHHHHHT-TSSEEETTEEEEEEEES--S
T ss_pred -----------------------------------------------HHHHHHHhcccc-CCeEEecCCcceeEccC--C
Confidence 011223344455 49999999999999863 3
Q ss_pred CCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 248 PDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
++.++.+.+..+|+...+.++.||+|+|-.+
T Consensus 222 ---~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 252 (335)
T 2zbw_A 222 ---RVRWAVVFHNQTQEELALEVDAVLILAGYIT 252 (335)
T ss_dssp ---SEEEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred ---CeeEEEEEECCCCceEEEecCEEEEeecCCC
Confidence 4667776544357656799999999999544
No 216
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.52 E-value=0.00039 Score=74.78 Aligned_cols=34 Identities=38% Similarity=0.426 Sum_probs=31.2
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
..+|+|||+|++|+.+|..+++.| +|+|+|+.+.
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 183 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDR 183 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcc
Confidence 468999999999999999999999 9999998753
No 217
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.51 E-value=0.00071 Score=73.52 Aligned_cols=98 Identities=21% Similarity=0.202 Sum_probs=71.4
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHHHHH
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
-.|+|||+|..|+-.|..+++.| +|+++++...... .++
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~~---------------------------------~d~------- 227 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLRG---------------------------------FDQ------- 227 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSSTT---------------------------------SCH-------
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCcc---------------------------------cCH-------
Confidence 36999999999999999999999 9999987432110 011
Q ss_pred HHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006387 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
.+...+.+.+++ .||+++.++.+.++..++++
T Consensus 228 -----------------------------------------------~~~~~l~~~l~~-~Gv~i~~~~~v~~i~~~~~~ 259 (483)
T 3dgh_A 228 -----------------------------------------------QMAELVAASMEE-RGIPFLRKTVPLSVEKQDDG 259 (483)
T ss_dssp -----------------------------------------------HHHHHHHHHHHH-TTCCEEETEEEEEEEECTTS
T ss_pred -----------------------------------------------HHHHHHHHHHHh-CCCEEEeCCEEEEEEEcCCC
Confidence 222344455555 49999999999999875444
Q ss_pred CCCeEEEEEEEecCCCeEEEEEcCeEEECCC
Q 006387 248 PDAVCHGVDTLNVETQEVVRFISKVTLLASG 278 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtG 278 (647)
.+ .+...+..+++...+.++.||+|+|
T Consensus 260 ---~~-~v~~~~~~~~~~~~~~~D~vi~a~G 286 (483)
T 3dgh_A 260 ---KL-LVKYKNVETGEESEDVYDTVLWAIG 286 (483)
T ss_dssp ---CE-EEEEEETTTCCEEEEEESEEEECSC
T ss_pred ---cE-EEEEecCCCCceeEEEcCEEEECcc
Confidence 33 3666565456666899999999998
No 218
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.51 E-value=3.7e-05 Score=83.05 Aligned_cols=38 Identities=18% Similarity=0.305 Sum_probs=33.9
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-------CeEEEEecCCCCCC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-------TVAVITKAEPHESN 125 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-------~V~llEk~~~~~G~ 125 (647)
.+||+|||||++||+||+.|+++| +|+|+|+.+..||.
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~ 49 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGK 49 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCce
Confidence 479999999999999999999976 79999998776664
No 219
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.51 E-value=0.00095 Score=68.33 Aligned_cols=52 Identities=21% Similarity=0.215 Sum_probs=39.4
Q ss_pred CCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 228 PNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 228 ~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
.||+++.++.++++..++++ .++.++.+.+..+|+...+.++.||+|+|-.+
T Consensus 208 ~gv~i~~~~~v~~i~~~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 259 (333)
T 1vdc_A 208 PKIDVIWNSSVVEAYGDGER--DVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEP 259 (333)
T ss_dssp TTEEEECSEEEEEEEESSSS--SSEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred CCeeEecCCceEEEeCCCCc--cceeeEEEEecCCCceEEEecCEEEEEeCCcc
Confidence 59999999999999865321 14667777654457666899999999999554
No 220
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.50 E-value=0.00053 Score=72.09 Aligned_cols=33 Identities=21% Similarity=0.443 Sum_probs=30.3
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-+|+|||+|..|+..|..+++.| +|+|+|+.+.
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 179 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQ 179 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcc
Confidence 47999999999999999999999 9999998653
No 221
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.50 E-value=0.00069 Score=73.79 Aligned_cols=98 Identities=21% Similarity=0.220 Sum_probs=70.5
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHHHHH
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
-.|+|||||..|+-.|..+++.| +|+|+++.+..... .+
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------~d-------- 238 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG--------------------------------MD-------- 238 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS--------------------------------SC--------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc--------------------------------CC--------
Confidence 46999999999999999999999 99999986532100 01
Q ss_pred HHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006387 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
..+...+.+.+++ .||+++.++.++++..++ +
T Consensus 239 ----------------------------------------------~~~~~~l~~~l~~-~gV~v~~~~~v~~i~~~~-~ 270 (491)
T 3urh_A 239 ----------------------------------------------GEVAKQLQRMLTK-QGIDFKLGAKVTGAVKSG-D 270 (491)
T ss_dssp ----------------------------------------------HHHHHHHHHHHHH-TTCEEECSEEEEEEEEET-T
T ss_pred ----------------------------------------------HHHHHHHHHHHHh-CCCEEEECCeEEEEEEeC-C
Confidence 1223344555655 499999999999998763 3
Q ss_pred CCCeEEEEEEEecCCCeEEEEEcCeEEECCC
Q 006387 248 PDAVCHGVDTLNVETQEVVRFISKVTLLASG 278 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtG 278 (647)
.+ .+.+.+..+|+...+.++.||+|+|
T Consensus 271 ---~~-~v~~~~~~~g~~~~i~~D~Vi~a~G 297 (491)
T 3urh_A 271 ---GA-KVTFEPVKGGEATTLDAEVVLIATG 297 (491)
T ss_dssp ---EE-EEEEEETTSCCCEEEEESEEEECCC
T ss_pred ---EE-EEEEEecCCCceEEEEcCEEEEeeC
Confidence 23 3555443446445789999999998
No 222
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.50 E-value=0.00071 Score=73.31 Aligned_cols=33 Identities=24% Similarity=0.291 Sum_probs=30.1
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+|||+|..|+-+|..+++.| +|+|+++.+.
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 212 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGH 212 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCc
Confidence 46999999999999999999999 9999998653
No 223
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.47 E-value=5.8e-05 Score=82.55 Aligned_cols=40 Identities=30% Similarity=0.429 Sum_probs=35.8
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCc
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNT 126 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t 126 (647)
..+||+|||||++||+||+.|++.| +|+|+|+....||..
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~ 52 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKL 52 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCce
Confidence 3589999999999999999999999 999999998877643
No 224
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.46 E-value=0.001 Score=67.49 Aligned_cols=95 Identities=19% Similarity=0.205 Sum_probs=72.3
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeeeecCCCCCHHHHHHHHHHhcccCCCHHHHHHHH
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
-.|+|||+|..|+-+|..+++.| +|.++++.+.... +
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~----------------------------------~-------- 192 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA----------------------------------Q-------- 192 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS----------------------------------C--------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc----------------------------------C--------
Confidence 57999999999999999999999 9999997653210 0
Q ss_pred HHhHHHHHHHHHcCCCcccCCCCCccccccCCccccceeeccCCchHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006387 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
..+.+.+.+..||+++.++.++++..+ +
T Consensus 193 --------------------------------------------------~~~~~~~~~~~gv~~~~~~~v~~i~~~--~ 220 (323)
T 3f8d_A 193 --------------------------------------------------PIYVETVKKKPNVEFVLNSVVKEIKGD--K 220 (323)
T ss_dssp --------------------------------------------------HHHHHHHHTCTTEEEECSEEEEEEEES--S
T ss_pred --------------------------------------------------HHHHHHHHhCCCcEEEeCCEEEEEecc--C
Confidence 011223333359999999999999865 3
Q ss_pred CCCeEEEEEEEecCCCeEEEEEcCeEEECCCcc
Q 006387 248 PDAVCHGVDTLNVETQEVVRFISKVTLLASGGA 280 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~ 280 (647)
++.++.+.+..+|+...+.++.||+|+|-.
T Consensus 221 ---~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 250 (323)
T 3f8d_A 221 ---VVKQVVVENLKTGEIKELNVNGVFIEIGFD 250 (323)
T ss_dssp ---SEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred ---ceeEEEEEECCCCceEEEEcCEEEEEECCC
Confidence 477788877666877789999999999944
No 225
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.46 E-value=0.001 Score=72.18 Aligned_cols=33 Identities=12% Similarity=0.202 Sum_probs=29.9
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+|||+|..|+-.|..+++.| +|+++++.+.
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 221 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDK 221 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCc
Confidence 46999999999999999999999 9999998653
No 226
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.44 E-value=6.7e-05 Score=79.08 Aligned_cols=39 Identities=21% Similarity=0.412 Sum_probs=35.6
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCc
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNT 126 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t 126 (647)
++||+|||||++|+++|+.|++.| +|+|+|+....+|.+
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~ 42 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNS 42 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCcc
Confidence 479999999999999999999999 999999998777654
No 227
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.44 E-value=0.00085 Score=67.92 Aligned_cols=49 Identities=8% Similarity=-0.017 Sum_probs=39.9
Q ss_pred CCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 228 PNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 228 ~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
.||+++.++.+.++..+ ++ ++.++.+. ..+|+...+.++.||+|+|-.+
T Consensus 196 ~gv~~~~~~~v~~i~~~-~~---~~~~v~~~-~~~g~~~~~~~D~vv~a~G~~p 244 (315)
T 3r9u_A 196 EKIELITSASVDEVYGD-KM---GVAGVKVK-LKDGSIRDLNVPGIFTFVGLNV 244 (315)
T ss_dssp TTEEEECSCEEEEEEEE-TT---EEEEEEEE-CTTSCEEEECCSCEEECSCEEE
T ss_pred CCeEEEeCcEEEEEEcC-CC---cEEEEEEE-cCCCCeEEeecCeEEEEEcCCC
Confidence 59999999999999876 44 67788775 4567767899999999999554
No 228
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.44 E-value=0.00011 Score=79.92 Aligned_cols=42 Identities=17% Similarity=0.204 Sum_probs=37.1
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC--CeEEEEecCCCCCCccc
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPHESNTNY 128 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~~~~~G~t~~ 128 (647)
..+||+|||||++||+||+.|++.| +|+|+|+.+..||....
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~ 51 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRS 51 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCE
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeee
Confidence 4689999999999999999999997 89999999887775543
No 229
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.43 E-value=0.00052 Score=73.99 Aligned_cols=33 Identities=27% Similarity=0.394 Sum_probs=30.1
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+|||+|.+|+.+|..+++.| +|+|+|+.+.
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~ 201 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDR 201 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCc
Confidence 46999999999999999999999 9999998653
No 230
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.42 E-value=6.7e-05 Score=78.96 Aligned_cols=34 Identities=26% Similarity=0.535 Sum_probs=31.4
Q ss_pred cCEEEECcchHHHHHHHHHHhc--C-CeEEEEecCCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKH--G-TVAVITKAEPH 122 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~--G-~V~llEk~~~~ 122 (647)
.||+|||||++|+++|+.|++. | +|+|+||.+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 3899999999999999999999 9 99999998754
No 231
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.41 E-value=0.00073 Score=73.33 Aligned_cols=33 Identities=21% Similarity=0.314 Sum_probs=30.1
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+|||||..|+-.|..+++.| +|+++++.+.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 219 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGET 219 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCc
Confidence 46999999999999999999999 9999998653
No 232
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.40 E-value=0.00091 Score=71.50 Aligned_cols=33 Identities=30% Similarity=0.368 Sum_probs=30.0
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+|||+|..|+-+|..+++.| +|+|+++.+.
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~ 183 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAAR 183 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCc
Confidence 46999999999999999999999 9999998653
No 233
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.39 E-value=0.00068 Score=72.95 Aligned_cols=33 Identities=15% Similarity=0.236 Sum_probs=30.1
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+|||||..|+-.|..+++.| +|+|+|+.+.
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 201 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDA 201 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCc
Confidence 47999999999999999999999 9999998653
No 234
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.38 E-value=0.00065 Score=73.49 Aligned_cols=33 Identities=30% Similarity=0.365 Sum_probs=30.1
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+|||||..|+-.|..+++.| +|+|+++.+.
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 211 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASE 211 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 46999999999999999999999 9999998753
No 235
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.37 E-value=0.00092 Score=72.20 Aligned_cols=33 Identities=24% Similarity=0.377 Sum_probs=30.0
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+|||+|..|+-+|..+++.| +|+|+++.+.
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~ 200 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDR 200 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 36999999999999999999999 9999998653
No 236
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.34 E-value=0.00011 Score=80.28 Aligned_cols=40 Identities=28% Similarity=0.406 Sum_probs=36.0
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCc
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNT 126 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t 126 (647)
..+||+|||||++||+||+.|++.| +|+|+|+....+|..
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRV 72 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCce
Confidence 3579999999999999999999999 999999998777643
No 237
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.33 E-value=0.0013 Score=70.87 Aligned_cols=33 Identities=15% Similarity=0.337 Sum_probs=30.1
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+|||||..|+-.|..+++.| +|+|+++.+.
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 205 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPR 205 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 47999999999999999999999 9999998753
No 238
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.29 E-value=0.0012 Score=71.50 Aligned_cols=34 Identities=29% Similarity=0.459 Sum_probs=30.6
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
.-+|+|||+|..|+-+|..+++.| +|+|+++.+.
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 220 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDH 220 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCc
Confidence 357999999999999999999999 9999998653
No 239
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.28 E-value=0.0013 Score=70.68 Aligned_cols=33 Identities=27% Similarity=0.349 Sum_probs=30.0
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+|||+|..|+-.|..+++.| +|+++++.+.
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 183 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHER 183 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 46999999999999999999999 9999998653
No 240
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.26 E-value=0.0017 Score=70.15 Aligned_cols=33 Identities=36% Similarity=0.407 Sum_probs=30.0
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+|||+|..|+-.|..+++.| +|+|+++.+.
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 208 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPR 208 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCc
Confidence 46999999999999999999999 9999998653
No 241
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.26 E-value=0.00072 Score=72.92 Aligned_cols=33 Identities=30% Similarity=0.473 Sum_probs=30.3
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+|||||.+|+-+|..+++.| +|+|+|+.+.
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 205 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARER 205 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCc
Confidence 47999999999999999999999 9999998754
No 242
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.24 E-value=0.0032 Score=68.96 Aligned_cols=31 Identities=26% Similarity=0.226 Sum_probs=28.6
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
-.|+|||+|..|+-.|..+++.| +|+|+++.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 35999999999999999999999 99999974
No 243
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.24 E-value=0.0016 Score=71.06 Aligned_cols=33 Identities=12% Similarity=0.271 Sum_probs=30.0
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+|||||..|+-.|..+++.| +|+|+++.+.
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 210 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNR 210 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCc
Confidence 46999999999999999999999 9999998653
No 244
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.21 E-value=0.0011 Score=68.17 Aligned_cols=49 Identities=12% Similarity=0.150 Sum_probs=36.8
Q ss_pred CCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 228 PNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 228 ~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
.||+++.++.++++..+ + ++.++.+.+..+|+...+.++.||+|+|-.+
T Consensus 204 ~gV~v~~~~~v~~i~~~-~----~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 252 (335)
T 2a87_A 204 DKIRFLTNHTVVAVDGD-T----TVTGLRVRDTNTGAETTLPVTGVFVAIGHEP 252 (335)
T ss_dssp TTEEEECSEEEEEEECS-S----SCCEEEEEEETTSCCEEECCSCEEECSCEEE
T ss_pred CCcEEEeCceeEEEecC-C----cEeEEEEEEcCCCceEEeecCEEEEccCCcc
Confidence 59999999999999754 2 3456666554456555799999999999554
No 245
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.20 E-value=0.0029 Score=68.86 Aligned_cols=33 Identities=27% Similarity=0.455 Sum_probs=30.4
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+|||||..|+-.|..+++.| +|+++++.+.
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 208 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGS 208 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCc
Confidence 46999999999999999999999 9999998764
No 246
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.18 E-value=0.0018 Score=70.51 Aligned_cols=33 Identities=15% Similarity=0.173 Sum_probs=30.0
Q ss_pred cCEEEECcchHHHHHHHHHHhc---C-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKH---G-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~---G-~V~llEk~~~ 121 (647)
-.|+|||+|..|+-.|..+++. | +|+|+++.+.
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~ 224 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDM 224 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCC
Confidence 4799999999999999999999 9 9999998753
No 247
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.18 E-value=0.0018 Score=70.43 Aligned_cols=33 Identities=15% Similarity=0.182 Sum_probs=29.9
Q ss_pred cCEEEECcchHHHHHHHHHHhc---C-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKH---G-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~---G-~V~llEk~~~ 121 (647)
-.|+|||+|..|+-.|..+++. | +|+|+++.+.
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~ 228 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNL 228 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCc
Confidence 4699999999999999999999 9 9999998653
No 248
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.17 E-value=0.0026 Score=68.39 Aligned_cols=33 Identities=30% Similarity=0.273 Sum_probs=30.1
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+|||+|..|+-.|..+++.| +|+++++.+.
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 181 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLEN 181 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCc
Confidence 46999999999999999999999 9999998653
No 249
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.17 E-value=0.0033 Score=68.04 Aligned_cols=33 Identities=33% Similarity=0.449 Sum_probs=30.0
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+|||+|..|+-.|..+++.| +|+++++.+.
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 214 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDK 214 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Confidence 46999999999999999999999 9999998653
No 250
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.16 E-value=0.0018 Score=70.38 Aligned_cols=33 Identities=24% Similarity=0.422 Sum_probs=30.1
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+|||+|..|+-.|..+++.| +|+|+++.+.
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 228 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDT 228 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccc
Confidence 46999999999999999999999 9999998753
No 251
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.13 E-value=0.00097 Score=70.78 Aligned_cols=33 Identities=21% Similarity=0.417 Sum_probs=30.1
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+|||+|..|+-+|..+++.| +|+++++.+.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~ 177 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILEAGDE 177 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCc
Confidence 46999999999999999999999 9999998653
No 252
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.10 E-value=0.0038 Score=68.04 Aligned_cols=33 Identities=27% Similarity=0.442 Sum_probs=30.1
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+|||+|..|+-.|..+++.| +|+++++.+.
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 216 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDH 216 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 47999999999999999999999 9999998653
No 253
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.09 E-value=0.00031 Score=80.34 Aligned_cols=39 Identities=23% Similarity=0.251 Sum_probs=35.0
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCC
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESN 125 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~ 125 (647)
..+||+|||||+||++||+.|++.| +|+|+|+.+..+|.
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~ 427 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGH 427 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCe
Confidence 4589999999999999999999999 99999998776553
No 254
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.09 E-value=0.0028 Score=68.33 Aligned_cols=33 Identities=15% Similarity=0.198 Sum_probs=30.0
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
.-.|+|||+|..|+-.|..+++.| +|.++++.+
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~ 203 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGK 203 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC
Confidence 347999999999999999999999 999999865
No 255
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.08 E-value=0.0028 Score=64.54 Aligned_cols=52 Identities=21% Similarity=0.270 Sum_probs=40.6
Q ss_pred CceEECCCCCcccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhhc
Q 006387 437 GGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 437 GGi~vD~~~~T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
|+|.||++++|++|||||+|||+ .+++..+++ ..|+..|+.||.++..++..
T Consensus 265 g~i~vd~~~~t~~~~vya~GD~~--~~~~~~~~~----~~A~~~g~~aa~~i~~~l~~ 316 (332)
T 3lzw_A 265 NSIVVKSTMETNIEGFFAAGDIC--TYEGKVNLI----ASGFGEAPTAVNNAKAYMDP 316 (332)
T ss_dssp TEEECCTTSBCSSTTEEECGGGE--ECTTCCCCH----HHHHHHHHHHHHHHHHHHCT
T ss_pred CeEEeCCCCceecCCEEEcccee--cCCCCcceE----eeehhhHHHHHHHHHHhhCh
Confidence 67899999999999999999997 445544444 44566688899998888754
No 256
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.08 E-value=0.00034 Score=79.32 Aligned_cols=39 Identities=26% Similarity=0.495 Sum_probs=34.8
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCC
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESN 125 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~ 125 (647)
..+||+|||||+||+.||+.|++.| +|+|+|+.+..+|.
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~ 411 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQ 411 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCe
Confidence 4589999999999999999999999 99999998766543
No 257
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.04 E-value=0.00042 Score=75.05 Aligned_cols=40 Identities=15% Similarity=0.295 Sum_probs=34.4
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC--CeEEEEecCCCCCCc
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPHESNT 126 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~~~~~G~t 126 (647)
..+||+|||+|++|+++|+.|++.| +|+|+|+....+|..
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~ 44 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRM 44 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCce
Confidence 3589999999999999999999999 599999988776643
No 258
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.03 E-value=0.0034 Score=67.89 Aligned_cols=32 Identities=28% Similarity=0.473 Sum_probs=29.5
Q ss_pred cCEEEECcchHHHHHHHHHHhc-C-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKH-G-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~-G-~V~llEk~~ 120 (647)
-.|+|||+|..|+-.|..+++. | +|+++++.+
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~ 193 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELAD 193 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccC
Confidence 4799999999999999999999 9 999999865
No 259
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.01 E-value=0.0042 Score=65.78 Aligned_cols=33 Identities=24% Similarity=0.413 Sum_probs=30.3
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+|||+|..|+-.|..+++.| +|+|+++.+.
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 179 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQPR 179 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCc
Confidence 47999999999999999999999 9999998753
No 260
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.00 E-value=0.0029 Score=68.60 Aligned_cols=33 Identities=21% Similarity=0.349 Sum_probs=30.2
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+|||||..|+-.|..+++.| +|+|+|+.+.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~ 219 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDG 219 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCc
Confidence 47999999999999999999999 9999998653
No 261
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=96.98 E-value=0.00044 Score=78.23 Aligned_cols=39 Identities=28% Similarity=0.395 Sum_probs=35.5
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G 124 (647)
...+||+|||+|++|++||+.|++.| +|+|+|+....||
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg 144 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 144 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBT
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 34689999999999999999999999 9999999887766
No 262
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.97 E-value=0.0022 Score=66.95 Aligned_cols=33 Identities=30% Similarity=0.406 Sum_probs=30.3
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+|||+|..|+-+|..+++.| +|+|+++.+.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 177 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAM 177 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCe
Confidence 47999999999999999999999 9999998753
No 263
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=96.97 E-value=0.0078 Score=60.77 Aligned_cols=50 Identities=20% Similarity=0.154 Sum_probs=39.0
Q ss_pred CCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 228 PNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 228 ~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
.++..+..+.+.++...++ ...++.+.+..+++...+.++.||+|+|-.+
T Consensus 201 ~~~~~~~~~~~~~i~~~~~----~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~p 250 (314)
T 4a5l_A 201 PKIEVIWNSELVELEGDGD----LLNGAKIHNLVSGEYKVVPVAGLFYAIGHSP 250 (314)
T ss_dssp TTEEEECSEEEEEEEESSS----SEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred cceeeEeeeeeEEEEeeee----ccceeEEeecccccceeeccccceEeccccc
Confidence 4788888888888876532 4677887776777777899999999999554
No 264
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.95 E-value=0.00044 Score=74.56 Aligned_cols=51 Identities=20% Similarity=0.215 Sum_probs=38.4
Q ss_pred cCceEECCCCC-cccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhhc
Q 006387 436 CGGVRAGLQGE-TNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 436 ~GGi~vD~~~~-T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
.|+|.+|+++| |++|||||+|||+ .|..| .+..+...|+.++.++...+..
T Consensus 337 ~g~i~vn~~~rvt~~pgvya~GD~~-~gp~~-------~i~~a~~~g~~~a~~i~~~l~~ 388 (456)
T 1lqt_A 337 QSGTIPNVGGRINGSPNEYVVGWIK-RGPTG-------VIGTNKKDAQDTVDTLIKNLGN 388 (456)
T ss_dssp TTTBCCEETTEETTCSSEEECTHHH-HCSCS-------CTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeeECCCCcCCCCCCEEEEeccC-CCCch-------hHHHHHHHHHHHHHHHHHHHHh
Confidence 57899999999 8999999999997 44432 1234666788888888776643
No 265
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=96.94 E-value=0.0037 Score=67.86 Aligned_cols=32 Identities=16% Similarity=0.377 Sum_probs=29.6
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
-.|+|||+|..|+-.|..+++.| +|.++++.+
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~ 224 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGD 224 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCeEEEEECCC
Confidence 47999999999999999999999 999999865
No 266
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=96.92 E-value=0.0059 Score=67.54 Aligned_cols=31 Identities=23% Similarity=0.405 Sum_probs=29.3
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
.|+|||+|..|+-+|..+++.| +|+++++.+
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 184 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHLGIKTTLLELAD 184 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCcEEEEEcCC
Confidence 7999999999999999999999 999999865
No 267
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=96.91 E-value=0.0048 Score=66.55 Aligned_cols=32 Identities=34% Similarity=0.463 Sum_probs=29.5
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
-.|+|||+|..|+-.|..+++.| +|+++++.+
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 209 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNT 209 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECC
Confidence 46999999999999999999999 999999865
No 268
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.90 E-value=0.0006 Score=78.71 Aligned_cols=39 Identities=28% Similarity=0.412 Sum_probs=35.4
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCC
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESN 125 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~ 125 (647)
...||+|||+|++||+||+.|++.| +|+|+|+....||.
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~ 316 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGR 316 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCc
Confidence 4579999999999999999999999 99999998877663
No 269
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.87 E-value=0.0084 Score=66.85 Aligned_cols=30 Identities=30% Similarity=0.318 Sum_probs=28.6
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
.|+|||||..|+-+|..+++.| +|+|+++.
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 6999999999999999999999 99999976
No 270
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=96.72 E-value=0.011 Score=64.73 Aligned_cols=32 Identities=19% Similarity=0.131 Sum_probs=29.2
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
-.++|||||..|+-.|..+++.| +|+|+++..
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~ 256 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRSI 256 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESSC
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEecccc
Confidence 46999999999999999999999 999998754
No 271
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=96.71 E-value=0.0073 Score=67.22 Aligned_cols=32 Identities=25% Similarity=0.421 Sum_probs=29.5
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
-.|+|||+|..|+-.|..+++.| +|+++++.+
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 220 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMAN 220 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 46999999999999999999999 999999765
No 272
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.63 E-value=0.012 Score=63.79 Aligned_cols=51 Identities=12% Similarity=0.102 Sum_probs=36.0
Q ss_pred HHHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCc
Q 006387 218 RALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGG 279 (647)
Q Consensus 218 ~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg 279 (647)
..+.+.+++ .||+++.++.|+++..+ ++ ++ .+.. .+|+ .+.|+.||+|+|-
T Consensus 230 ~~~~~~l~~-~GV~v~~~~~V~~i~~~-~~---~~-~v~l---~dG~--~i~aD~Vv~a~G~ 280 (493)
T 1m6i_A 230 NWTMEKVRR-EGVKVMPNAIVQSVGVS-SG---KL-LIKL---KDGR--KVETDHIVAAVGL 280 (493)
T ss_dssp HHHHHHHHT-TTCEEECSCCEEEEEEE-TT---EE-EEEE---TTSC--EEEESEEEECCCE
T ss_pred HHHHHHHHh-cCCEEEeCCEEEEEEec-CC---eE-EEEE---CCCC--EEECCEEEECCCC
Confidence 344455565 49999999999999765 33 33 3433 3564 5899999999983
No 273
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.60 E-value=0.0017 Score=72.07 Aligned_cols=40 Identities=25% Similarity=0.298 Sum_probs=37.3
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCc
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNT 126 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t 126 (647)
.+|||||||+|..|...|..|++.| +|++|||+...||+.
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~ 47 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNW 47 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCcc
Confidence 4799999999999999999999999 999999999988854
No 274
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.52 E-value=0.0045 Score=66.53 Aligned_cols=32 Identities=19% Similarity=0.336 Sum_probs=28.8
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-C-eEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-T-VAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~-V~llEk~~ 120 (647)
-.|+|||||..|+-+|..+.+.| + |+++++..
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 46999999999999999999999 5 99998765
No 275
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=96.40 E-value=0.014 Score=62.91 Aligned_cols=33 Identities=27% Similarity=0.353 Sum_probs=30.1
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+|||+|..|+-.|..+++.| +|+++++.+.
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 206 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDR 206 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 46999999999999999999999 9999998653
No 276
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.40 E-value=0.014 Score=69.16 Aligned_cols=31 Identities=19% Similarity=0.306 Sum_probs=28.5
Q ss_pred CEEEECcchHHHHHHHHHHhcC--CeEEEEecC
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG--TVAVITKAE 120 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~~ 120 (647)
.|+|||||..|+-+|..+++.| +|+|+++..
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 7999999999999999999999 699999764
No 277
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.38 E-value=0.0092 Score=63.76 Aligned_cols=33 Identities=18% Similarity=0.293 Sum_probs=30.2
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+|||||..|+-.|..+++.| +|+|+++.+.
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 181 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDK 181 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSC
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeecc
Confidence 36999999999999999999999 9999998754
No 278
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.37 E-value=0.0018 Score=69.73 Aligned_cols=51 Identities=25% Similarity=0.296 Sum_probs=40.2
Q ss_pred cCceEECCCCCcc-cCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhhc
Q 006387 436 CGGVRAGLQGETN-VRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 436 ~GGi~vD~~~~T~-ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
.|||.+|+++||+ +|||||+|||+ .|..| .+..++..|+.++.+++.++..
T Consensus 345 ~g~i~vn~~~rt~~~p~vya~Gd~~-~g~~~-------~i~~a~~~g~~aa~~i~~~l~~ 396 (460)
T 1cjc_A 345 KLGVVPNMEGRVVDVPGLYCSGWVK-RGPTG-------VITTTMTDSFLTGQILLQDLKA 396 (460)
T ss_dssp TTTBCCEETTEETTCTTEEECTHHH-HCTTC-------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeeECCCCcCcCCCCEEEEEeCC-cCCCc-------cHHHHHHHHHHHHHHHHHHHHh
Confidence 4889999999999 89999999998 44322 2446777888899988887643
No 279
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.35 E-value=0.014 Score=68.89 Aligned_cols=51 Identities=16% Similarity=0.148 Sum_probs=37.2
Q ss_pred CCcEEEcceEEEEEEecCCCCCCeEEEEEEEe--cC--CCeEEEEEcCeEEECCCccc
Q 006387 228 PNISVFEHHFAIDLLTTLDGPDAVCHGVDTLN--VE--TQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 228 ~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~--~~--~g~~~~i~Ak~VVlAtGg~~ 281 (647)
.||+++.++.++++..++++ ++.+|.+.+ .. +|+..++.++.||+|+|-.+
T Consensus 329 ~GV~v~~~~~v~~i~~~~~~---~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P 383 (965)
T 2gag_A 329 DGVQVISGSVVVDTEADENG---ELSAIVVAELDEARELGGTQRFEADVLAVAGGFNP 383 (965)
T ss_dssp TTCCEEETEEEEEEEECTTS---CEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEE
T ss_pred CCeEEEeCCEeEEEeccCCC---CEEEEEEEeccccCCCCceEEEEcCEEEECCCcCc
Confidence 49999999999999863123 577787764 11 25456799999999999543
No 280
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.31 E-value=0.033 Score=61.21 Aligned_cols=33 Identities=21% Similarity=0.293 Sum_probs=30.4
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+|||+|..|+-.|..+++.+ +|+|+++.+.
T Consensus 186 krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 46999999999999999999999 9999999764
No 281
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.29 E-value=0.016 Score=63.06 Aligned_cols=48 Identities=17% Similarity=0.065 Sum_probs=33.7
Q ss_pred CceEECCCCCc-ccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHh
Q 006387 437 GGVRAGLQGET-NVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDH 491 (647)
Q Consensus 437 GGi~vD~~~~T-~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~ 491 (647)
|+|.||+++|| +.|++||+|||+..+.. ..+ ..|.-.|+.+|+++...
T Consensus 351 g~I~Vd~~lq~~~~~~IfAiGD~a~~~~p---~~a----~~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 351 RGLAVNDFLQVKGSNNIFAIGDNAFAGLP---PTA----QVAHQEAEYLAKNFDKM 399 (502)
T ss_dssp SSEEBCTTSBBTTCSSEEECGGGEESSSC---CCH----HHHHHHHHHHHHHHHHH
T ss_pred CceeECCccccCCCCCEEEEEcccCCCCC---Cch----HHHHHHHHHHHHHHHHH
Confidence 78999999998 79999999999832221 111 23555677777776553
No 282
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.22 E-value=0.017 Score=61.80 Aligned_cols=33 Identities=30% Similarity=0.485 Sum_probs=30.1
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+|||+|..|+-.|..+++.| +|+++++.+.
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 182 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGER 182 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCc
Confidence 37999999999999999999999 9999998653
No 283
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.02 E-value=0.07 Score=53.72 Aligned_cols=32 Identities=19% Similarity=0.317 Sum_probs=29.5
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
.|+|||||..|+-+|..+++.| +|+|+++.+.
T Consensus 147 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 6999999999999999999999 9999998653
No 284
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=95.86 E-value=0.088 Score=57.70 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=30.3
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+|||+|..|+-+|..+++.| +|+|+++.+.
T Consensus 179 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 46999999999999999999999 9999998764
No 285
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.81 E-value=0.005 Score=64.62 Aligned_cols=33 Identities=21% Similarity=0.261 Sum_probs=30.5
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+|||+|..|+-+|..+++.| +|+|+|+.+.
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~ 180 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEY 180 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCc
Confidence 47999999999999999999999 9999998764
No 286
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=95.80 E-value=0.037 Score=57.15 Aligned_cols=31 Identities=32% Similarity=0.551 Sum_probs=27.9
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
.|+|||+|..|+-+|..+++.| +|+++++.+
T Consensus 168 ~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~ 199 (369)
T 3d1c_A 168 QYVVIGGNESGFDAAYQLAKNGSDIALYTSTT 199 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred EEEEECCCcCHHHHHHHHHhcCCeEEEEecCC
Confidence 6999999999999999999999 999999865
No 287
>2lfc_A Fumarate reductase, flavoprotein subunit; structural genomics, northeast structural genomics consortiu PSI-biology; NMR {Lactobacillus plantarum}
Probab=95.53 E-value=0.0034 Score=57.10 Aligned_cols=78 Identities=18% Similarity=0.173 Sum_probs=51.1
Q ss_pred cceee-ecccCC--CceEEeCCCCccccccccccccCchhHHHHHHHHHHHhcCCCeEEEecCCCCh------------h
Q 006387 337 SFLIT-EAVRGD--GGILYNLGMERFMPLYDERAELAPRDVVARSIDDQLKKRNEKYVLLDISHKPT------------E 401 (647)
Q Consensus 337 ~~l~~-e~~~~~--g~~~vn~~G~rf~~~~~~~~~l~~rd~~~~~i~~~~~~~~~~~v~ld~~~~~~------------~ 401 (647)
..+++ +.+|+. |+++||.+|+||++ |+.+++.++.++..+. ++..++.+|...... .
T Consensus 7 ~~l~~~e~~rg~~~G~i~VN~~G~RFvn------E~~~~~~~~~ai~~q~--~~~~~~I~D~~~~~~~~~~~~~~~~~~~ 78 (160)
T 2lfc_A 7 AKLTTYASKQATDMGAIYVNSKGDRIVN------ESNVYTTFRNAILKQA--DKVAYLVMDERTWKKVYDLLILHDFTPE 78 (160)
T ss_dssp CSCCHHHHHHHHHHTCEEECSSSCEEES------SCSCHHHHHHHHHHSS--SCCEEEEEEHHHHHHHHHHHHHHTCCHH
T ss_pred ceeeechhhccccCCEEEECCCCcCccC------CCCcHHHHHHHHHhCC--CCeEEEEECcchHhhhccccccCcccch
Confidence 45566 888998 99999999999998 4567788888776532 223456677532211 1
Q ss_pred HHH-----------hhChhHHHHHHHcCCCCC
Q 006387 402 KIL-----------SHFPNIAAECLKYGLDIT 422 (647)
Q Consensus 402 ~l~-----------~~~~~~~~~~~~~G~d~~ 422 (647)
.+. .+.+++.+++++.|+|+.
T Consensus 79 ~~~~~~~~~~~g~~~kadTleeLA~~~gid~~ 110 (160)
T 2lfc_A 79 EIKSFFENKGKRPVFVKGSLESAAEQAGIVVD 110 (160)
T ss_dssp HHHHTTSCSSSSCSEECSSHHHHHHHHTCCHH
T ss_pred hhhHhhhhhhcCceEecCCHHHHHHHhCCCHH
Confidence 111 133677888888888753
No 288
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=95.37 E-value=0.091 Score=57.70 Aligned_cols=34 Identities=21% Similarity=0.292 Sum_probs=30.7
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
.-.|+|||+|..|+-+|..+++.+ +|+|+++.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 346999999999999999999999 9999999764
No 289
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=95.25 E-value=0.059 Score=57.74 Aligned_cols=49 Identities=10% Similarity=0.011 Sum_probs=36.0
Q ss_pred CCcEEEcceEEEEEEecCCCCCCeEEEEEEEec-------------CCCeEEEEEcCeEEECCCccc
Q 006387 228 PNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNV-------------ETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 228 ~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~-------------~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
.||++++++.++++..+ + ++.++.+.+. .+|+..++.|+.||+|+|-.+
T Consensus 265 ~gv~i~~~~~~~~i~~~--~---~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p 326 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGK--R---KVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRG 326 (456)
T ss_dssp EEEEEECSEEEEEEECS--S---SCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEEC
T ss_pred ceEEEEeCCCCeEEecC--C---cEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEcccccc
Confidence 48999999999999754 3 4556655421 246666899999999999554
No 290
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=95.25 E-value=0.0071 Score=68.08 Aligned_cols=35 Identities=14% Similarity=0.422 Sum_probs=30.8
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC---------CeEEEEecC-CC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG---------TVAVITKAE-PH 122 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G---------~V~llEk~~-~~ 122 (647)
..+|+|||||++||+||+.|++.| +|+|+|+.. ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 468999999999999999998764 599999987 55
No 291
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=95.19 E-value=0.029 Score=64.04 Aligned_cols=32 Identities=13% Similarity=0.199 Sum_probs=29.4
Q ss_pred cCEEEEC--cchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIG--SGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIG--gG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
-.|+||| ||..|+-+|..|++.| +|+|+++.+
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 4699999 9999999999999999 999999865
No 292
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=94.96 E-value=0.0094 Score=64.13 Aligned_cols=36 Identities=31% Similarity=0.308 Sum_probs=32.0
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC---CeEEEEecCCCC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG---TVAVITKAEPHE 123 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G---~V~llEk~~~~~ 123 (647)
.+||+|||+|+||+.||..|++.| +|+|+|+.+..+
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~g 44 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPF 44 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSC
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCC
Confidence 479999999999999999999876 799999987543
No 293
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=94.61 E-value=0.074 Score=60.03 Aligned_cols=50 Identities=10% Similarity=0.115 Sum_probs=35.6
Q ss_pred HHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 220 LLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 220 L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
+.+.+++ .||+++.++.++++.. + ++.+. .+|+...+.++.||+|+|-.+
T Consensus 579 ~~~~l~~-~GV~v~~~~~v~~i~~--~-------~v~~~--~~G~~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 579 HRTTLLS-RGVKMIPGVSYQKIDD--D-------GLHVV--INGETQVLAVDNVVICAGQEP 628 (671)
T ss_dssp HHHHHHH-TTCEEECSCEEEEEET--T-------EEEEE--ETTEEEEECCSEEEECCCEEE
T ss_pred HHHHHHh-cCCEEEeCcEEEEEeC--C-------eEEEe--cCCeEEEEeCCEEEECCCccc
Confidence 4455566 4999999999998862 2 23332 356656799999999999554
No 294
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=94.28 E-value=0.16 Score=50.22 Aligned_cols=33 Identities=18% Similarity=0.176 Sum_probs=28.5
Q ss_pred ccCEEEECcchHHHHHHHHHHhcCCeEEEEecC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHGTVAVITKAE 120 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G~V~llEk~~ 120 (647)
.-.|+|||+|..|+-.|..+++.|+|.++++..
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g~v~~v~~~~ 173 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWGETTFFTNGI 173 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTSEEEEECTTT
T ss_pred CCEEEEEecCccHHHHHHHhhhcCcEEEEECCC
Confidence 347999999999999999999988888887643
No 295
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=93.20 E-value=0.68 Score=50.59 Aligned_cols=32 Identities=25% Similarity=0.451 Sum_probs=29.2
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
-.|+|||+|..|+-.|..+++.| +|+++++.+
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~ 219 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTP 219 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CEEEEECCCccHHHHHHHHhhcCceEEEEEcCC
Confidence 46999999999999999999999 999999865
No 296
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=91.99 E-value=0.7 Score=48.88 Aligned_cols=51 Identities=10% Similarity=0.072 Sum_probs=33.3
Q ss_pred HHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEe-cCCCe---EEEEEcCeEEECCCcc
Q 006387 220 LLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLN-VETQE---VVRFISKVTLLASGGA 280 (647)
Q Consensus 220 L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~-~~~g~---~~~i~Ak~VVlAtGg~ 280 (647)
+.+.+++ .||+++.++.++++.. ++ +.+.+ ..+|+ ..++.++.||+|+|-.
T Consensus 214 ~~~~l~~-~gI~~~~~~~v~~v~~--~~-------v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~ 268 (437)
T 3sx6_A 214 LTKGLKE-EGIEAYTNCKVTKVED--NK-------MYVTQVDEKGETIKEMVLPVKFGMMIPAFK 268 (437)
T ss_dssp HHHHHHH-TTCEEECSEEEEEEET--TE-------EEEEEECTTSCEEEEEEEECSEEEEECCEE
T ss_pred HHHHHHH-CCCEEEcCCEEEEEEC--Ce-------EEEEecccCCccccceEEEEeEEEEcCCCc
Confidence 4445555 4999999999999853 22 22222 12332 4578999999999843
No 297
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=91.54 E-value=0.48 Score=47.30 Aligned_cols=31 Identities=13% Similarity=0.099 Sum_probs=23.5
Q ss_pred cCEEEECcch-HHHHHHHHHHhcC-CeEEEEec
Q 006387 89 FDFSVIGSGV-AGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~-AGl~AA~~aa~~G-~V~llEk~ 119 (647)
-.++|||||. +++.+|..+.+.| +|++++++
T Consensus 147 ~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~ 179 (304)
T 4fk1_A 147 QPLIIISENEDHTLHMTKLVYNWSTDLVIATNG 179 (304)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCSCEEEECSS
T ss_pred CceeeecCCCchhhhHHHHHHhCCceEEEEecc
Confidence 4678888775 5678888888888 88888764
No 298
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.47 E-value=0.22 Score=43.64 Aligned_cols=33 Identities=15% Similarity=0.200 Sum_probs=30.2
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
.-.|+|||.|..|...|..|.+.| +|+++|+.+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 346999999999999999999999 999999865
No 299
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=91.41 E-value=0.64 Score=49.04 Aligned_cols=51 Identities=10% Similarity=0.010 Sum_probs=35.0
Q ss_pred HHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcc
Q 006387 219 ALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGA 280 (647)
Q Consensus 219 ~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~ 280 (647)
.+.+.+++ .||+++.++.|+++.. + ++.+.+.. ++..++.+|.||+|+|-.
T Consensus 205 ~l~~~l~~-~GV~i~~~~~v~~v~~---~------~v~~~~~~-~~g~~i~~D~vv~a~G~~ 255 (430)
T 3h28_A 205 LVEDLFAE-RNIDWIANVAVKAIEP---D------KVIYEDLN-GNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp HHHHHHHH-TTCEEECSCEEEEECS---S------EEEEECTT-SCEEEEECSEEEEECEEE
T ss_pred HHHHHHHH-CCCEEEeCCEEEEEeC---C------eEEEEecC-CCceEEeeeEEEECCCCc
Confidence 44455566 4999999999999852 2 23443322 344579999999999844
No 300
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=91.06 E-value=0.34 Score=51.88 Aligned_cols=41 Identities=15% Similarity=0.262 Sum_probs=37.1
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCc
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNT 126 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t 126 (647)
+.++||+|||+|++|+++|+.|++.| +|+|+||++..||.+
T Consensus 18 ~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~ 59 (475)
T 3p1w_A 18 GEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGET 59 (475)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCc
Confidence 35799999999999999999999999 999999998777654
No 301
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=90.62 E-value=2.3 Score=45.80 Aligned_cols=31 Identities=19% Similarity=0.363 Sum_probs=27.1
Q ss_pred CEEEECcchHHHHHHHHHHhc--C-CeEEEEecC
Q 006387 90 DFSVIGSGVAGLCYALEVAKH--G-TVAVITKAE 120 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~--G-~V~llEk~~ 120 (647)
.|+|||+|.+|.-.+..|++. + +|.++-+.+
T Consensus 248 rV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 248 NIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCC
Confidence 499999999999999999875 4 799988865
No 302
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=90.51 E-value=0.21 Score=44.61 Aligned_cols=32 Identities=28% Similarity=0.342 Sum_probs=29.4
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
..|+|||+|..|...|..|.+.| +|+++++.+
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 46999999999999999999999 999999864
No 303
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=89.76 E-value=0.27 Score=42.85 Aligned_cols=32 Identities=31% Similarity=0.581 Sum_probs=29.2
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
-.|+|+|+|.-|...|..|.+.| +|+++|+.+
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 36999999999999999999999 999999754
No 304
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=89.34 E-value=0.24 Score=47.62 Aligned_cols=42 Identities=19% Similarity=0.211 Sum_probs=33.4
Q ss_pred CCCCcccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhhc
Q 006387 443 LQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 443 ~~~~T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
...+|+.++||+|||++ + |.++..|+..|+.||+.++++++.
T Consensus 288 ~~~~~~~~~v~l~GDa~-~---------g~gv~~A~~sG~~aA~~I~~~L~~ 329 (336)
T 3kkj_A 288 GALSDADLGIYVCGDWC-L---------SGRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp SSEEETTTTEEECCGGG-T---------TSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred cceeeCCCCEEEEeccc-C---------CcCHHHHHHHHHHHHHHHHHHhhc
Confidence 34457899999999985 2 234777999999999999998753
No 305
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=89.23 E-value=0.28 Score=47.03 Aligned_cols=37 Identities=16% Similarity=0.227 Sum_probs=27.8
Q ss_pred CcccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhh
Q 006387 446 ETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHK 492 (647)
Q Consensus 446 ~T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~ 492 (647)
.|++|||||+|||+ .+| ....++-.|+.+|+++.+.+
T Consensus 195 ~t~~p~iya~G~~a---~~g-------~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 195 LKRLEGLYAVGLCV---REG-------DYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp ETTSBSEEECGGGT---SCC-------CHHHHHHHHHHHHHHHHHHC
T ss_pred ccccccceeeeecc---cCc-------cHHHHHHHHHHHHHHHHhhc
Confidence 37999999999997 233 34456778999998887643
No 306
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=88.72 E-value=1.3 Score=46.19 Aligned_cols=48 Identities=10% Similarity=0.090 Sum_probs=33.5
Q ss_pred HHHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcc
Q 006387 218 RALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGA 280 (647)
Q Consensus 218 ~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~ 280 (647)
..+.+.+++ .||+++.++.++++.. + ++.. .+|+ ++.+|.||+|+|-.
T Consensus 222 ~~~~~~l~~-~gV~~~~~~~v~~i~~---~------~v~~---~~g~--~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 222 KAVASIYNQ-LGIKLVHNFKIKEIRE---H------EIVD---EKGN--TIPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHH-HTCEEECSCCEEEECS---S------EEEE---TTSC--EEECSEEEEECCEE
T ss_pred HHHHHHHHH-CCCEEEcCCceEEECC---C------eEEE---CCCC--EEeeeEEEECCCCC
Confidence 344455555 4999999999998852 2 2333 3454 58999999999844
No 307
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=88.52 E-value=0.35 Score=41.72 Aligned_cols=31 Identities=19% Similarity=0.370 Sum_probs=28.5
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
..|+|||+|..|...|..|.+.| +|+++++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 46999999999999999999999 99999974
No 308
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=87.86 E-value=0.6 Score=41.37 Aligned_cols=31 Identities=26% Similarity=0.429 Sum_probs=28.9
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
-.|+|+|+|..|...|..|.+.| +|+++|+.
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 36999999999999999999999 99999985
No 309
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=87.17 E-value=0.55 Score=40.66 Aligned_cols=31 Identities=32% Similarity=0.451 Sum_probs=28.4
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
.|+|+|+|..|...|..|.+.| +|+++++..
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5999999999999999999999 999999753
No 310
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=86.24 E-value=0.56 Score=44.65 Aligned_cols=32 Identities=16% Similarity=0.219 Sum_probs=29.0
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
.-.|||||||..|...|..|.+.| +|+|++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 346999999999999999999999 99999863
No 311
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=86.20 E-value=0.64 Score=49.34 Aligned_cols=45 Identities=20% Similarity=0.248 Sum_probs=35.1
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCccccCCCeee
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSA 135 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t~~a~Ggi~~ 135 (647)
.|+|||.|.+|+++|..|+++| +|++.|......+..... -|+..
T Consensus 7 ~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~-~G~~~ 52 (439)
T 2x5o_A 7 NVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-EAVER 52 (439)
T ss_dssp CEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTGGGSC-TTSCE
T ss_pred EEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchhHHhh-CCCEE
Confidence 5899999999999999999999 999999876554433333 34443
No 312
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=85.57 E-value=0.72 Score=42.18 Aligned_cols=32 Identities=22% Similarity=0.176 Sum_probs=29.2
Q ss_pred cCEEEECcchHHHHHHHHHHhc-C-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKH-G-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~-G-~V~llEk~~ 120 (647)
-.|+|||.|..|...|..|.+. | +|+++|+.+
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 4699999999999999999999 9 999999754
No 313
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=85.54 E-value=0.72 Score=38.29 Aligned_cols=32 Identities=22% Similarity=0.359 Sum_probs=28.2
Q ss_pred cCEEEECcchHHHHHHHHHHhcC--CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG--TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~~ 120 (647)
..|+|+|+|..|...+..|.+.| +|+++++..
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 35999999999999999999998 788888753
No 314
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=85.16 E-value=0.54 Score=45.71 Aligned_cols=35 Identities=14% Similarity=0.164 Sum_probs=31.3
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC--CeEEEEecCCC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPH 122 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~~~~ 122 (647)
...|+|||+|..|..+|..|++.| +++|+|.....
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~ 67 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVS 67 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcc
Confidence 457999999999999999999999 78999987754
No 315
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=85.14 E-value=0.54 Score=46.28 Aligned_cols=32 Identities=19% Similarity=0.347 Sum_probs=29.2
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
--|||||||..|+..|..|.+.| +|+|++...
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 45999999999999999999999 999998754
No 316
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=84.90 E-value=0.81 Score=46.41 Aligned_cols=39 Identities=15% Similarity=0.267 Sum_probs=33.7
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC--CeEEEEecCCCCCCc
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPHESNT 126 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~~~~~G~t 126 (647)
...|+|||+|..|..+|..|+..| +++|+|.+...-++.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL 74 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNP 74 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTST
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEeccccc
Confidence 567999999999999999999999 899999887654443
No 317
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=84.28 E-value=1.6 Score=46.46 Aligned_cols=40 Identities=20% Similarity=0.306 Sum_probs=37.1
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCc
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNT 126 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t 126 (647)
.++||+|||+|++||+||+.|++.| +|+|+|+....||.+
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 50 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEA 50 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccc
Confidence 4689999999999999999999999 999999999888754
No 318
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=83.93 E-value=0.97 Score=49.96 Aligned_cols=44 Identities=25% Similarity=0.116 Sum_probs=35.4
Q ss_pred CCCCCcc-cCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhhcc
Q 006387 442 GLQGETN-VRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKST 495 (647)
Q Consensus 442 D~~~~T~-ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~~ 495 (647)
+...+|. +||||+||+++ |.. +..||+..|.+||.+|+.++++.
T Consensus 381 ~~tLe~k~~~gLf~AGqin--Gt~--------GyeEAaaqGl~AG~nAa~~~~~~ 425 (637)
T 2zxi_A 381 YPTLETKKIRGLFHAGNFN--GTT--------GYEEAAGQGIVAGINAALRAFGK 425 (637)
T ss_dssp CTTSBBSSSBTEEECGGGG--TBC--------SHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CccccccCCCCEEEeeecC--Ccc--------hHHHHHHHHHHHHHHHHHHhcCC
Confidence 4566664 99999999996 543 35699999999999999988654
No 319
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=83.91 E-value=0.71 Score=48.03 Aligned_cols=33 Identities=27% Similarity=0.327 Sum_probs=30.1
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
...|+|||+|.+|+.+|..|...| +|+++|+..
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 457999999999999999999999 999999865
No 320
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=83.41 E-value=0.74 Score=45.75 Aligned_cols=40 Identities=18% Similarity=0.309 Sum_probs=32.0
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC--CeEEEEecCCCCCCc
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPHESNT 126 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~~~~~G~t 126 (647)
....|+|||+|..|..+|..|++.| +++|+|.+...-++.
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL 76 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANM 76 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC-----
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhc
Confidence 3578999999999999999999999 899999887654443
No 321
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=83.29 E-value=0.84 Score=43.13 Aligned_cols=31 Identities=19% Similarity=0.285 Sum_probs=28.7
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
.|+|||+|..|...|..|.+.| +|+++|+.+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4899999999999999999999 999999754
No 322
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=82.91 E-value=0.77 Score=48.70 Aligned_cols=33 Identities=6% Similarity=-0.086 Sum_probs=29.7
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-C-eEEEEecC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-T-VAVITKAE 120 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~-V~llEk~~ 120 (647)
.-+|+|||+|..|+-.|..+++.| + |+|+++..
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 357999999999999999999999 8 99998864
No 323
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=82.81 E-value=0.84 Score=48.78 Aligned_cols=32 Identities=13% Similarity=0.037 Sum_probs=29.6
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
-.|+|||+|..|+-.|..+++.| +|+|+++.+
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~ 230 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRT 230 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSS
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECC
Confidence 46999999999999999999999 999999765
No 324
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=82.07 E-value=0.8 Score=47.25 Aligned_cols=33 Identities=24% Similarity=0.198 Sum_probs=29.9
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
...|+|||+|..|+.+|..|...| +|+++|+..
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 457999999999999999999999 999999764
No 325
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=81.87 E-value=1.3 Score=46.77 Aligned_cols=40 Identities=15% Similarity=0.257 Sum_probs=36.5
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCc
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNT 126 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t 126 (647)
.++||+|||+|++|+++|+.|++.| +|+|+|+....||.+
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~ 45 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGES 45 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccc
Confidence 4689999999999999999999999 999999998877654
No 326
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=81.67 E-value=1 Score=46.33 Aligned_cols=31 Identities=23% Similarity=0.265 Sum_probs=28.5
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
-.|+|+|+|.+|+.++..|...| +|+++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~ 199 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDIN 199 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 46999999999999999999999 99999874
No 327
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=80.95 E-value=0.92 Score=48.26 Aligned_cols=32 Identities=28% Similarity=0.201 Sum_probs=29.4
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
-.|+|||.|.+|+++|..|.++| +|.+.|+..
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 45999999999999999999999 999999854
No 328
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=80.87 E-value=1.1 Score=45.17 Aligned_cols=31 Identities=29% Similarity=0.448 Sum_probs=28.5
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
-.|.|||+|.-|...|..++..| +|+|+|..
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~ 38 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECC
Confidence 36999999999999999999999 99999964
No 329
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=80.62 E-value=1 Score=47.04 Aligned_cols=33 Identities=30% Similarity=0.324 Sum_probs=29.5
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
...|+|||+|.+|+.+|..|...| +|+++|+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 356999999999999999999999 999998754
No 330
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=80.09 E-value=1 Score=43.67 Aligned_cols=35 Identities=29% Similarity=0.307 Sum_probs=31.2
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC--CeEEEEecCCC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPH 122 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~~~~ 122 (647)
...|+|||.|..|..+|..|++.| +++|+|.....
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~ 64 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVH 64 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcc
Confidence 467999999999999999999999 78999987653
No 331
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=79.76 E-value=1.5 Score=47.92 Aligned_cols=39 Identities=15% Similarity=0.267 Sum_probs=33.7
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC--CeEEEEecCCCCCCc
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPHESNT 126 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~~~~~G~t 126 (647)
...|+|||+|..|..+|..|++.| +++|+|.+...-++.
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL 367 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNP 367 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCCTTST
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCccccccc
Confidence 467999999999999999999999 899999887654443
No 332
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=79.61 E-value=1.3 Score=45.41 Aligned_cols=35 Identities=17% Similarity=0.298 Sum_probs=31.6
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC--CeEEEEecCCC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPH 122 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~~~~ 122 (647)
...|+|||+|..|..+|..|++.| +++|+|.+...
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~Ve 154 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIE 154 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBCC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcCc
Confidence 467999999999999999999999 89999987654
No 333
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=79.54 E-value=1.5 Score=47.91 Aligned_cols=40 Identities=18% Similarity=0.287 Sum_probs=34.2
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC--CeEEEEecCCCCCCc
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPHESNT 126 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~~~~~G~t 126 (647)
....|+|||+|..|..+|..|++.| +++|+|.+...-++.
T Consensus 325 ~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL 366 (615)
T 4gsl_A 325 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNP 366 (615)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTGG
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCcccCc
Confidence 3567999999999999999999999 899999887654443
No 334
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=79.37 E-value=1.2 Score=45.83 Aligned_cols=35 Identities=29% Similarity=0.402 Sum_probs=30.9
Q ss_pred ccccCEEEECcchHHHHHHHHHHhcC--CeEEEEecC
Q 006387 86 VKYFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAE 120 (647)
Q Consensus 86 ~~~~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~~ 120 (647)
-.+..|+|+|+|.||+.+|..+...| +|+++|+..
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 34578999999999999999999989 799999864
No 335
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=79.36 E-value=1.3 Score=46.05 Aligned_cols=33 Identities=27% Similarity=0.260 Sum_probs=29.5
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
...|+|||+|.+|+.+|..|...| +|+++++..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 457999999999999999999999 999998754
No 336
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=78.99 E-value=1.4 Score=43.11 Aligned_cols=33 Identities=27% Similarity=0.526 Sum_probs=29.6
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
...++|||+|.+|.++|..|++.| +|.|+.|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 456999999999999999999999 999998764
No 337
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=78.98 E-value=1.3 Score=45.61 Aligned_cols=33 Identities=21% Similarity=0.266 Sum_probs=30.0
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC--CeEEEEec
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG--TVAVITKA 119 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~ 119 (647)
.+..|+|+|+|.+|..+|..|...| +|+|+|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 4578999999999999999999999 69999986
No 338
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=78.67 E-value=1.4 Score=43.27 Aligned_cols=31 Identities=19% Similarity=0.292 Sum_probs=28.0
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
..|+|+|+|.+|..+|..|++.| +|+++++.
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 35999999999999999999999 99998764
No 339
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=77.79 E-value=1.7 Score=44.59 Aligned_cols=31 Identities=23% Similarity=0.375 Sum_probs=28.6
Q ss_pred EEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 91 FSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 91 VlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
|+|||||.-|..+|+.|.+.| +|+++|..+.
T Consensus 4 I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 4 ICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 899999999999999999999 9999997653
No 340
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=76.88 E-value=4.7 Score=43.04 Aligned_cols=56 Identities=9% Similarity=0.075 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHcCCC-cEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcc
Q 006387 214 REIERALLEAVVSDPN-ISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGA 280 (647)
Q Consensus 214 ~~~~~~L~~~~~~~~g-v~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~ 280 (647)
..+...|.+.+.+. | ++|+.+++|++|..++++ + .+. ..+|+ .++|+.||+|+|..
T Consensus 255 ~~l~~~l~~~l~~~-g~~~i~~~~~V~~i~~~~~~----v---~v~-~~~g~--~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 255 SAFARRFWEEAAGT-GRLGYVFGCPVRSVVNERDA----A---RVT-ARDGR--EFVAKRVVCTIPLN 311 (495)
T ss_dssp HHHHHHHHHHHHTT-TCEEEESSCCEEEEEECSSS----E---EEE-ETTCC--EEEEEEEEECCCGG
T ss_pred HHHHHHHHHHhhhc-CceEEEeCCEEEEEEEcCCE----E---EEE-ECCCC--EEEcCEEEECCCHH
Confidence 46788888888875 6 999999999999876432 3 222 23454 58999999999953
No 341
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=76.64 E-value=2.3 Score=44.82 Aligned_cols=36 Identities=25% Similarity=0.233 Sum_probs=32.3
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC--CeEEEEecCCCC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPHE 123 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~~~~~ 123 (647)
...|+|||+|..|..+|..|+..| +++|+|.....-
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~Ve~ 77 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDV 77 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBCCG
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCEech
Confidence 468999999999999999999999 899999877643
No 342
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=76.59 E-value=1.8 Score=44.56 Aligned_cols=31 Identities=19% Similarity=0.290 Sum_probs=28.5
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
..|+|+|+|..|..+|..|+..| +|+++++.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~ 198 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVN 198 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 46999999999999999999999 99999874
No 343
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=76.45 E-value=1.8 Score=43.61 Aligned_cols=32 Identities=34% Similarity=0.674 Sum_probs=29.0
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
..|.|||+|.-|...|..|++.| +|.++++..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 35999999999999999999999 999998853
No 344
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=75.73 E-value=1.6 Score=46.76 Aligned_cols=38 Identities=24% Similarity=0.444 Sum_probs=29.9
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCCCCCCc
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNT 126 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~~~G~t 126 (647)
.+|||||||++||+||+.|+++| +|+|+|+.+..||.+
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~ 40 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRA 40 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcE
Confidence 37999999999999999999999 999999999888754
No 345
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=75.55 E-value=1.9 Score=43.23 Aligned_cols=32 Identities=22% Similarity=0.597 Sum_probs=28.8
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
..|.|||+|.-|...|..|++.| +|+++++..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 36999999999999999999999 999999854
No 346
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=75.54 E-value=2.1 Score=43.62 Aligned_cols=39 Identities=10% Similarity=0.105 Sum_probs=33.4
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC--CeEEEEecCCCCCCc
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPHESNT 126 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~~~~~G~t 126 (647)
...|+|||.|..|..+|..|+..| +++|+|.....-.+.
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL 76 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDP 76 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCcchhhC
Confidence 578999999999999999999999 899999877654433
No 347
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=75.39 E-value=1.1 Score=39.22 Aligned_cols=31 Identities=16% Similarity=0.140 Sum_probs=27.5
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
..|+|||+|..|...|..+.+.| +|+++++.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 46999999999999999999989 88888864
No 348
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=75.13 E-value=2.1 Score=44.24 Aligned_cols=32 Identities=38% Similarity=0.386 Sum_probs=28.8
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
...|+|||+|..|..+|..|...| +|+++++.
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 346999999999999999999999 99999864
No 349
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=75.11 E-value=2.3 Score=44.48 Aligned_cols=32 Identities=16% Similarity=0.214 Sum_probs=29.7
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
-.|||||.|..|...|..|.+.| +|++||+.+
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 46999999999999999999999 999999864
No 350
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=74.84 E-value=2 Score=42.32 Aligned_cols=30 Identities=33% Similarity=0.531 Sum_probs=27.8
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
.|.|||+|.-|...|..+++.| +|+++++.
T Consensus 6 kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 5999999999999999999999 99999864
No 351
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=74.61 E-value=1.7 Score=42.68 Aligned_cols=31 Identities=13% Similarity=0.216 Sum_probs=28.3
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
..|+|+|+|.+|..+|..|++.| +|+|+.+.
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 45999999999999999999999 99999875
No 352
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=74.33 E-value=0.9 Score=44.90 Aligned_cols=48 Identities=19% Similarity=0.269 Sum_probs=38.1
Q ss_pred CCcccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhhc
Q 006387 445 GETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 445 ~~T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
.+|++|++|++|+++ .-++|..+++. .+..++.+|..||+.+.++++.
T Consensus 229 ~~~~~p~i~a~G~~~-~~~~g~~~~gp-~~~~~~~sG~~~a~~i~~~l~~ 276 (284)
T 1rp0_A 229 TREVVPGMIVTGMEV-AEIDGAPRMGP-TFGAMMISGQKAGQLALKALGL 276 (284)
T ss_dssp CEEEETTEEECTHHH-HHHHTCEECCS-CCHHHHHHHHHHHHHHHHHTTC
T ss_pred cccccCCEEEEeeeh-hhhcCCCCcCh-HHHHHHHhHHHHHHHHHHHhhh
Confidence 357889999999987 55677666665 4677889999999999887743
No 353
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=74.18 E-value=2.1 Score=42.57 Aligned_cols=30 Identities=33% Similarity=0.524 Sum_probs=27.8
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
.|.|||+|.-|...|..+++.| +|+++++.
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 4999999999999999999999 99999864
No 354
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=74.05 E-value=2.5 Score=42.45 Aligned_cols=31 Identities=16% Similarity=0.411 Sum_probs=27.6
Q ss_pred cCEEEECcchHHHHHHHHHHhcC--CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG--TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~ 119 (647)
..++|+|+|.+|.++|..|++.| +|+|+.|.
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 45999999999999999999999 58888875
No 355
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=74.02 E-value=2.5 Score=41.91 Aligned_cols=32 Identities=22% Similarity=0.419 Sum_probs=29.2
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
..|.|||+|.-|...|..|++.| +|.++++..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 36999999999999999999999 999999863
No 356
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=73.67 E-value=2.3 Score=42.02 Aligned_cols=31 Identities=23% Similarity=0.320 Sum_probs=27.3
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-C-eEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-T-VAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~-V~llEk~ 119 (647)
..|+|+|+|.+|..+|..|++.| + |+|+.|.
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 46999999999999999999999 4 8888764
No 357
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=73.56 E-value=2.4 Score=42.85 Aligned_cols=31 Identities=19% Similarity=0.163 Sum_probs=27.9
Q ss_pred CEEEECcchHHHH-HHHHHHhcC-CeEEEEecC
Q 006387 90 DFSVIGSGVAGLC-YALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVlVIGgG~AGl~-AA~~aa~~G-~V~llEk~~ 120 (647)
.|.|||.|.+|++ +|..|.++| +|.+.|+..
T Consensus 6 ~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 6 HIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp EEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 5899999999996 788899999 999999865
No 358
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=73.02 E-value=1.9 Score=43.45 Aligned_cols=32 Identities=28% Similarity=0.391 Sum_probs=28.8
Q ss_pred cCEEEECcchHHHHHHHHHHhcCCeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHGTVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G~V~llEk~~ 120 (647)
-.|+|||+|..|+-+|..+++.|+|+++.+..
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVAETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSEEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhhCCEEEEECCC
Confidence 57999999999999999999988898888763
No 359
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=73.00 E-value=3 Score=42.23 Aligned_cols=31 Identities=19% Similarity=0.453 Sum_probs=28.5
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
..|.|||+|.-|...|..|++.| +|.++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 46999999999999999999999 99999873
No 360
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=72.94 E-value=2.5 Score=41.61 Aligned_cols=33 Identities=24% Similarity=0.159 Sum_probs=29.1
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC--CeEEEEecC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAE 120 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~~ 120 (647)
...++|||+|.+|..+|..|++.| +|.|+.|..
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 457999999999999999999999 788988764
No 361
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=72.83 E-value=2.5 Score=44.89 Aligned_cols=31 Identities=19% Similarity=0.173 Sum_probs=28.6
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
-.|||||+|..|...|..|.+.| +|+|++..
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 35999999999999999999999 99999974
No 362
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=72.75 E-value=2.8 Score=42.02 Aligned_cols=31 Identities=16% Similarity=0.334 Sum_probs=27.7
Q ss_pred cCEEEECcchHHHHHHHHHHhcC--CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG--TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~ 119 (647)
..++|+|+|.+|.++|..|++.| +|+|+.|.
T Consensus 149 k~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 46999999999999999999999 58888875
No 363
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=72.47 E-value=3.4 Score=40.01 Aligned_cols=31 Identities=19% Similarity=0.321 Sum_probs=28.1
Q ss_pred CEEEECcchHHHHHHHHHHhcC--CeEEEEecC
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG--TVAVITKAE 120 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~~ 120 (647)
.++|||+|.+|.+++..|.+.| +|.|++|..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 7999999999999999999999 788998753
No 364
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=71.35 E-value=2.9 Score=40.99 Aligned_cols=31 Identities=26% Similarity=0.365 Sum_probs=27.2
Q ss_pred cCEEEECcchHHHHHHHHHHhcC--CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG--TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~ 119 (647)
..++|+|+|.|+-++++.|++.| +|.|+.|.
T Consensus 126 ~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt 158 (269)
T 3tum_A 126 KRALVIGCGGVGSAIAYALAEAGIASITLCDPS 158 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred CeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCC
Confidence 46999999999999999999999 67788753
No 365
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=71.32 E-value=2.9 Score=41.06 Aligned_cols=31 Identities=23% Similarity=0.418 Sum_probs=28.4
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
.|.|||+|.-|...|..+++.| +|+++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 3899999999999999999999 999998865
No 366
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=71.05 E-value=2.7 Score=41.83 Aligned_cols=31 Identities=13% Similarity=0.194 Sum_probs=27.2
Q ss_pred cCEEEECcchHHHHHHHHHHhcC--CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG--TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~ 119 (647)
..|+|||+|.+|..+|..|++.| +|+|+.+.
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 45999999999999999999999 68888764
No 367
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=70.68 E-value=3 Score=40.90 Aligned_cols=32 Identities=16% Similarity=0.178 Sum_probs=27.6
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC--CeEEEEec
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG--TVAVITKA 119 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~ 119 (647)
...++|+|+|.+|..+|..|++.| +|+|+.|.
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 346999999999999999999999 68888764
No 368
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=70.58 E-value=3.6 Score=42.09 Aligned_cols=32 Identities=25% Similarity=0.433 Sum_probs=29.2
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
...|.|||+|.-|...|..+++.| +|.++++.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 357999999999999999999999 99999874
No 369
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=70.54 E-value=2.9 Score=41.03 Aligned_cols=31 Identities=16% Similarity=0.213 Sum_probs=28.0
Q ss_pred cCEEEECcchHHHHHHHHHHhcC--CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG--TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~ 119 (647)
..|+|||+|.+|..+|..|.+.| +|.|+.|.
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 46999999999999999999999 68888874
No 370
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=70.41 E-value=3.2 Score=38.84 Aligned_cols=32 Identities=16% Similarity=0.343 Sum_probs=29.1
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
..|.|||+|.-|...|..+++.| +|+++++..
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~ 52 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKD 52 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 46999999999999999999999 999998764
No 371
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=70.17 E-value=2.9 Score=44.43 Aligned_cols=31 Identities=26% Similarity=0.176 Sum_probs=28.0
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
--|+|+|+|..|..+|..|+..| +|+++|..
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~ 297 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEID 297 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 35899999999999999999999 99998864
No 372
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=70.11 E-value=2 Score=45.79 Aligned_cols=32 Identities=16% Similarity=0.375 Sum_probs=29.5
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
..|+|+|+|--|...|..|.+.| +|+|||+.+
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 35999999999999999999999 999999864
No 373
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=70.10 E-value=8.9 Score=42.45 Aligned_cols=55 Identities=16% Similarity=0.141 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHcCCCcEEEcceEEEEEEecCC-CCCCeEEEEEEEecCCCeEEEEEcCeEEECC
Q 006387 214 REIERALLEAVVSDPNISVFEHHFAIDLLTTLD-GPDAVCHGVDTLNVETQEVVRFISKVTLLAS 277 (647)
Q Consensus 214 ~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~-g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAt 277 (647)
..+..+|.+.++.. |.+++.++.|.+|+.+++ | +++||.. .+|+ +|+|+.||...
T Consensus 378 g~L~qaL~r~~~~~-Gg~i~l~~~V~~I~~~~~~g---~v~gV~~---~~Ge--~i~A~~VVs~~ 433 (650)
T 1vg0_A 378 GELPQCFCRMCAVF-GGIYCLRHSVQCLVVDKESR---KCKAVID---QFGQ--RIISKHFIIED 433 (650)
T ss_dssp THHHHHHHHHHHHT-TCEEESSCCEEEEEEETTTC---CEEEEEE---TTSC--EEECSEEEEEG
T ss_pred hHHHHHHHHHHHHc-CCEEEeCCEeeEEEEeCCCC---eEEEEEe---CCCC--EEEcCEEEECh
Confidence 36888898888885 999999999999998743 5 7888762 4565 58999998843
No 374
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=70.09 E-value=2.8 Score=41.32 Aligned_cols=32 Identities=22% Similarity=0.138 Sum_probs=28.0
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC--CeEEEEec
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG--TVAVITKA 119 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~ 119 (647)
...++|+|+|.+|.++|..|++.| +|+|+.|.
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt 155 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRN 155 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESC
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 346999999999999999999999 68888764
No 375
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=69.78 E-value=3.5 Score=40.67 Aligned_cols=31 Identities=23% Similarity=0.282 Sum_probs=27.8
Q ss_pred cCEEEEC-cchHHHHHHHHHHhcC-CeEEEEec
Q 006387 89 FDFSVIG-SGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIG-gG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
..++|+| +|.+|..+|..+++.| +|+++.+.
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 4599999 9999999999999999 98888864
No 376
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=69.53 E-value=3.2 Score=41.74 Aligned_cols=31 Identities=29% Similarity=0.448 Sum_probs=28.3
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
..|.|||+|.-|...|..+++.| +|++.|+.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35999999999999999999999 99999864
No 377
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=69.13 E-value=3.6 Score=40.55 Aligned_cols=31 Identities=16% Similarity=0.220 Sum_probs=27.3
Q ss_pred cCEEEECcchHHHHHHHHHHhcC--CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG--TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~ 119 (647)
..++|+|+|.+|..+|..|++.| +|.|+.|.
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred CEEEEECchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 46999999999999999999999 68888764
No 378
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=68.77 E-value=3.3 Score=45.66 Aligned_cols=38 Identities=21% Similarity=0.166 Sum_probs=33.0
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC--CeEEEEecCCCCCC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPHESN 125 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~~~~~G~ 125 (647)
...|+|||+|..|+.+|..|++.| +++|+|.....-++
T Consensus 17 ~s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~Ve~SN 56 (640)
T 1y8q_B 17 GGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSN 56 (640)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCBCCGGG
T ss_pred cCeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCEEChhh
Confidence 467999999999999999999999 89999988764433
No 379
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=68.72 E-value=3.1 Score=44.51 Aligned_cols=33 Identities=27% Similarity=0.453 Sum_probs=29.8
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
+..|.|||.|.-|+..|..+++.| +|+++++..
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 467999999999999999999999 999998753
No 380
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=68.42 E-value=3.8 Score=41.46 Aligned_cols=32 Identities=22% Similarity=0.249 Sum_probs=28.4
Q ss_pred cCEEEECcchHHHHHHHHHHhcC--CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG--TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~~ 120 (647)
..|.|||+|..|...|..++..| +|+|+|...
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 46999999999999999999988 788998753
No 381
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=68.30 E-value=3.4 Score=40.98 Aligned_cols=30 Identities=20% Similarity=0.419 Sum_probs=27.7
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
.|.|||+|.-|...|..+++.| +|+++++.
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 5999999999999999999999 99999864
No 382
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=66.63 E-value=3.8 Score=44.40 Aligned_cols=31 Identities=29% Similarity=0.442 Sum_probs=26.7
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
..++|+|+|.+|.++|..+++.| +|+++.+.
T Consensus 365 k~vlV~GaGGig~aia~~L~~~G~~V~i~~R~ 396 (523)
T 2o7s_A 365 KTVVVIGAGGAGKALAYGAKEKGAKVVIANRT 396 (523)
T ss_dssp -CEEEECCSHHHHHHHHHHHHHCC-CEEEESS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 36999999999999999999999 99998874
No 383
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=66.61 E-value=5 Score=42.50 Aligned_cols=32 Identities=22% Similarity=0.401 Sum_probs=29.1
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
..|.|||+|.-|...|..+++.| +|+++|...
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 35999999999999999999999 999999754
No 384
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=65.80 E-value=6.3 Score=36.90 Aligned_cols=31 Identities=23% Similarity=0.290 Sum_probs=28.3
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
..|.|||+|..|...|..+++.| +|.++++.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46999999999999999999999 99999874
No 385
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=65.77 E-value=4.7 Score=39.89 Aligned_cols=32 Identities=28% Similarity=0.360 Sum_probs=28.8
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
...|+|||.|..|..+|..|...| +|+++++.
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~ 187 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARE 187 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECC
Confidence 346999999999999999999999 99999874
No 386
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=65.53 E-value=4.8 Score=39.99 Aligned_cols=32 Identities=28% Similarity=0.346 Sum_probs=28.8
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
...|+|||.|..|..+|..|...| +|+++++.
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~ 189 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARS 189 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECC
Confidence 346999999999999999999999 99999874
No 387
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=65.09 E-value=4.2 Score=43.08 Aligned_cols=31 Identities=35% Similarity=0.500 Sum_probs=28.5
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
.|.|||.|.-|+..|..+++.| +|+++++..
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 5899999999999999999999 999999753
No 388
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=65.05 E-value=4 Score=43.44 Aligned_cols=31 Identities=26% Similarity=0.452 Sum_probs=28.3
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
.|.|||+|.-|...|..+++.| +|+++|+..
T Consensus 39 kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 5999999999999999999999 999998643
No 389
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=64.93 E-value=4.5 Score=40.38 Aligned_cols=32 Identities=22% Similarity=0.512 Sum_probs=29.2
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
..|.|||.|.-|...|..+++.| +|++.++..
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 46999999999999999999999 999998754
No 390
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=64.88 E-value=4.3 Score=41.20 Aligned_cols=31 Identities=26% Similarity=0.390 Sum_probs=28.4
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
..|.|||+|..|...|..+++.| +|+++++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 46999999999999999999999 99999875
No 391
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=64.88 E-value=4.7 Score=40.42 Aligned_cols=30 Identities=27% Similarity=0.555 Sum_probs=27.1
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
..|.|||+|.-|...|..|++.| +|.++ +.
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 46999999999999999999999 99988 53
No 392
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=64.67 E-value=4.1 Score=39.92 Aligned_cols=31 Identities=23% Similarity=0.320 Sum_probs=28.0
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
..|+|||+|.+|...|..|.+.| +|+++++.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 46999999999999999999999 89988864
No 393
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=64.59 E-value=4.8 Score=40.23 Aligned_cols=31 Identities=26% Similarity=0.488 Sum_probs=27.3
Q ss_pred CEEEECcchHHHHHHHHHHhc--C-CeEEEEecC
Q 006387 90 DFSVIGSGVAGLCYALEVAKH--G-TVAVITKAE 120 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~--G-~V~llEk~~ 120 (647)
.|.|||+|..|...|..+++. | +|+++|...
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 488999999999999999985 6 899999754
No 394
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=63.72 E-value=4.7 Score=40.24 Aligned_cols=31 Identities=29% Similarity=0.493 Sum_probs=27.5
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
..|+|||+|.-|...|..|+ .| +|.++++..
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 36999999999999999999 89 999998753
No 395
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=63.32 E-value=5.2 Score=42.09 Aligned_cols=32 Identities=28% Similarity=0.319 Sum_probs=29.2
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
...+.|||.|.-||..|..+++.| +|+.+|-.
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did 53 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVN 53 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECC
Confidence 457999999999999999999999 99999864
No 396
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=63.17 E-value=5.7 Score=36.89 Aligned_cols=30 Identities=27% Similarity=0.453 Sum_probs=27.1
Q ss_pred CEEEEC-cchHHHHHHHHHHhcC-CeEEEEec
Q 006387 90 DFSVIG-SGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVlVIG-gG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
.|+||| +|..|...|..+++.| +|.++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 389999 9999999999999999 99999874
No 397
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=63.16 E-value=5.4 Score=40.35 Aligned_cols=30 Identities=13% Similarity=-0.034 Sum_probs=25.7
Q ss_pred CEEEECcchHHHHHHHHHHhcC--CeEEEEec
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG--TVAVITKA 119 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~ 119 (647)
.|+|+|+|+.|+.++..|+..+ +|+.++..
T Consensus 166 ~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~ 197 (348)
T 4eez_A 166 WQVIFGAGGLGNLAIQYAKNVFGAKVIAVDIN 197 (348)
T ss_dssp EEEEECCSHHHHHHHHHHHHTSCCEEEEEESC
T ss_pred EEEEEcCCCccHHHHHHHHHhCCCEEEEEECc
Confidence 5999999999999999988764 88888754
No 398
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=62.58 E-value=5.4 Score=40.24 Aligned_cols=32 Identities=28% Similarity=0.370 Sum_probs=28.2
Q ss_pred cCEEEECcchHHHHHHHHHHhcC--CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG--TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~~ 120 (647)
..|.|||+|..|...|..++..| +|+++|...
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 46999999999999999999988 788888753
No 399
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=62.23 E-value=1.7 Score=44.16 Aligned_cols=49 Identities=22% Similarity=0.264 Sum_probs=39.4
Q ss_pred CCCcccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhhhc
Q 006387 444 QGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 444 ~~~T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
+.+--+||||++|-.+ .-++|.+|.|- -++..+.+|++||+.|.+.++.
T Consensus 288 ~t~~v~~gl~~~gm~~-~~~~g~~rmgp-~fg~m~~sg~~~a~~~~~~~~~ 336 (344)
T 3jsk_A 288 NTREIVPGLIVGGMEL-SEIDGANRMGP-TFGAMALSGVKAAHEAIRVFDL 336 (344)
T ss_dssp TCEEEETTEEECGGGH-HHHHTCEECCS-CCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCceEcCCEEEechhh-HhhcCCCCCCc-ccceeeecCHHHHHHHHHHHHh
Confidence 4445699999999988 68899999864 3566788999999999887643
No 400
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=62.08 E-value=5.2 Score=42.24 Aligned_cols=34 Identities=24% Similarity=0.403 Sum_probs=30.9
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
+..+.|||.|.-|+..|..+++.| +|+++++...
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 467999999999999999999999 9999998753
No 401
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=62.07 E-value=4.9 Score=43.46 Aligned_cols=34 Identities=12% Similarity=0.155 Sum_probs=31.0
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC--CeEEEEecCC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEP 121 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~~~ 121 (647)
...|+|||.|..|..+|..|+..| +++|+|....
T Consensus 32 ~~~VlvvG~GGlGseiak~La~aGVg~itlvD~D~V 67 (531)
T 1tt5_A 32 SAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQV 67 (531)
T ss_dssp HCEEEEECCSHHHHHHHHHHHTTTCSEEEEECCCBB
T ss_pred cCeEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEe
Confidence 578999999999999999999999 8999997764
No 402
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=61.64 E-value=6.2 Score=40.60 Aligned_cols=33 Identities=30% Similarity=0.436 Sum_probs=29.5
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
.-|+|||+|.-|...|..|.+.| +|++++..+.
T Consensus 13 ~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 13 ATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 45999999999999999999999 9999987543
No 403
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=61.43 E-value=5.6 Score=39.74 Aligned_cols=31 Identities=29% Similarity=0.489 Sum_probs=27.2
Q ss_pred cCEEEECcchHHHHHHHHHHhcC---CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG---TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G---~V~llEk~ 119 (647)
..|.|||+|..|...|..+++.| +|+++++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 46999999999999999999987 58888864
No 404
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=61.40 E-value=6.8 Score=37.95 Aligned_cols=30 Identities=30% Similarity=0.401 Sum_probs=27.7
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
.|+|||+|..|...|..+.+.| +|+++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 7999999999999999999999 99998864
No 405
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=61.39 E-value=6.2 Score=40.70 Aligned_cols=32 Identities=28% Similarity=0.470 Sum_probs=29.0
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
.-|+|||+|..|...|..|.+.| +|++++..+
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~ 47 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTK 47 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 36999999999999999999999 999998754
No 406
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=61.39 E-value=4.2 Score=41.61 Aligned_cols=30 Identities=30% Similarity=0.357 Sum_probs=27.7
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
.|.|||+|.-|...|..+++.| +|.++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 6999999999999999999999 99999864
No 407
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=61.37 E-value=4.9 Score=41.97 Aligned_cols=33 Identities=21% Similarity=0.128 Sum_probs=29.1
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
.-.|+|||.|..|..+|..|...| +|++.|+.+
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 346999999999999999999999 999998643
No 408
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=61.35 E-value=7.1 Score=42.61 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=30.9
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+|||+|..|...|..|.+.| +|+++|+.+.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~ 382 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQES 382 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChH
Confidence 57999999999999999999999 9999998875
No 409
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=61.03 E-value=4.8 Score=43.03 Aligned_cols=32 Identities=22% Similarity=0.203 Sum_probs=28.6
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
-.|+|||.|..|..+|..|...| +|+++|+.+
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45999999999999999999999 999998643
No 410
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=60.82 E-value=5.1 Score=40.20 Aligned_cols=29 Identities=21% Similarity=0.446 Sum_probs=27.0
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEe
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITK 118 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk 118 (647)
.|.|||+|.-|...|..+++.| +|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 3889999999999999999999 9999987
No 411
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=60.61 E-value=6.2 Score=39.67 Aligned_cols=31 Identities=19% Similarity=0.320 Sum_probs=27.6
Q ss_pred cCEEEECcchHHHHHHHHHHhcC--CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG--TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~ 119 (647)
..|.|||+|..|...|..++..| +|+|+|..
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~ 37 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIV 37 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 36999999999999999999988 78888864
No 412
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=60.55 E-value=6 Score=39.39 Aligned_cols=30 Identities=20% Similarity=0.498 Sum_probs=26.4
Q ss_pred CEEEECcchHHHHHHHHHHhcC---CeEEEEec
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG---TVAVITKA 119 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G---~V~llEk~ 119 (647)
.|.|||+|..|...|..++..| .|+++|..
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4899999999999999999987 58888864
No 413
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=60.46 E-value=6.2 Score=40.01 Aligned_cols=32 Identities=25% Similarity=0.257 Sum_probs=27.4
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
-.|+|+|+|..|+.++..|...| +|++++..+
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~ 210 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNE 210 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 35999999999999998888889 999887643
No 414
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=60.43 E-value=4.7 Score=42.50 Aligned_cols=30 Identities=23% Similarity=0.317 Sum_probs=27.6
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
.|.|||.|.-|+..|..+++.| +|+++++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 4889999999999999999999 99999874
No 415
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=60.32 E-value=4.7 Score=36.99 Aligned_cols=30 Identities=10% Similarity=0.117 Sum_probs=25.9
Q ss_pred CEEEEC-cchHHHHHHHHHHhcC-CeEEEEec
Q 006387 90 DFSVIG-SGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVlVIG-gG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
-|+|+| +|..|..++..+...| +|+++++.
T Consensus 41 ~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~ 72 (198)
T 1pqw_A 41 RVLIHSATGGVGMAAVSIAKMIGARIYTTAGS 72 (198)
T ss_dssp EEEETTTTSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred EEEEeeCCChHHHHHHHHHHHcCCEEEEEeCC
Confidence 489999 5999999999999899 99888753
No 416
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=60.32 E-value=7.4 Score=35.97 Aligned_cols=30 Identities=30% Similarity=0.473 Sum_probs=27.4
Q ss_pred EEEECc-chHHHHHHHHHHhcC-CeEEEEecC
Q 006387 91 FSVIGS-GVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 91 VlVIGg-G~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
|+|+|+ |..|...+..|.++| +|+++.+..
T Consensus 3 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred EEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 899995 999999999999999 999998864
No 417
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=59.92 E-value=6.2 Score=40.42 Aligned_cols=30 Identities=20% Similarity=0.276 Sum_probs=27.2
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEe
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITK 118 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk 118 (647)
..|+|+|.|..|..+|..|.+.| +|++.|.
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVvv~D~ 204 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLVVTDV 204 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEcC
Confidence 45999999999999999999999 9998763
No 418
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=59.70 E-value=6 Score=45.33 Aligned_cols=38 Identities=26% Similarity=0.245 Sum_probs=33.4
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC--CeEEEEecCCCCC
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPHES 124 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~~~~~G 124 (647)
....|+|||+|..|+.+|..|++.| +++|+|.....-+
T Consensus 410 ~~~~vlvvG~GglG~~~~~~L~~~Gvg~i~l~D~d~v~~s 449 (805)
T 2nvu_B 410 DTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVS 449 (805)
T ss_dssp HTCCEEEECCSSHHHHHHHHHHTTTCCEEEEEECCBCCGG
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCcEEEECCCeeccc
Confidence 3578999999999999999999999 8999998876443
No 419
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=59.58 E-value=5.9 Score=39.68 Aligned_cols=32 Identities=38% Similarity=0.391 Sum_probs=28.0
Q ss_pred cCEEEECcchHHHHHHHHHHhcC--CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG--TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~~ 120 (647)
..|.|||+|..|...|..+++.| +|+++|...
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 35999999999999999999988 788888753
No 420
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=59.38 E-value=7.5 Score=37.22 Aligned_cols=33 Identities=27% Similarity=0.397 Sum_probs=29.6
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
...|.|||.|.-|...|..+++.| +|++.++..
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 456999999999999999999999 999998754
No 421
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=59.35 E-value=6.5 Score=40.07 Aligned_cols=32 Identities=22% Similarity=0.278 Sum_probs=27.5
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
-.|+|+|+|..|+.++..|...| +|+++++..
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~ 213 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAMGAETYVISRSS 213 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 35999999999999998888889 998888643
No 422
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=59.34 E-value=6.4 Score=39.01 Aligned_cols=33 Identities=27% Similarity=0.385 Sum_probs=28.5
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
.+-.|.|||+|.-|...|..++ .| +|++.|+.+
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 3457999999999999999999 99 999998743
No 423
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=59.33 E-value=7.1 Score=41.69 Aligned_cols=31 Identities=35% Similarity=0.444 Sum_probs=28.5
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
.|.|||+|.-|...|..+++.| +|+++|+..
T Consensus 7 kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 5999999999999999999999 999998753
No 424
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=59.28 E-value=6.8 Score=40.05 Aligned_cols=31 Identities=23% Similarity=0.302 Sum_probs=27.2
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
-.|+|+|+|..|+.++..|...| +|+++++.
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~ 220 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAFGSKVTVISTS 220 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35999999999999999998899 99888764
No 425
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=59.23 E-value=9 Score=37.28 Aligned_cols=32 Identities=22% Similarity=0.373 Sum_probs=29.2
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
.|+|.|+|..|...+..|.++| +|+++.+...
T Consensus 5 ~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 5 KILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 5999999999999999999999 9999998653
No 426
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=59.10 E-value=7.4 Score=36.65 Aligned_cols=32 Identities=19% Similarity=0.343 Sum_probs=28.7
Q ss_pred cCEEEECc-chHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGS-GVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGg-G~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
.-|+|.|+ |..|...+..|.++| +|+++.+..
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 45999998 999999999999999 999998864
No 427
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=58.81 E-value=6.6 Score=38.56 Aligned_cols=31 Identities=29% Similarity=0.571 Sum_probs=28.4
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
.|.|||.|.-|...|..+++.| +|++.++.+
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 4899999999999999999999 999998764
No 428
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=58.76 E-value=5.4 Score=38.54 Aligned_cols=31 Identities=23% Similarity=0.153 Sum_probs=27.1
Q ss_pred CEEEECc-c-hHHHHHHHHHHhcC-CeEEEEecC
Q 006387 90 DFSVIGS-G-VAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVlVIGg-G-~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
-|||.|| | .-|...|..++++| +|+++++..
T Consensus 24 ~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 24 VVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp EEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 4899998 7 59999999999999 999998753
No 429
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=58.68 E-value=7.4 Score=39.73 Aligned_cols=31 Identities=23% Similarity=0.164 Sum_probs=27.0
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
-.|||+|+|..|+.++..|...| +|++++..
T Consensus 191 ~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~ 222 (363)
T 3uog_A 191 DRVVVQGTGGVALFGLQIAKATGAEVIVTSSS 222 (363)
T ss_dssp CEEEEESSBHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEecC
Confidence 35999999999999998888889 99988753
No 430
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=58.46 E-value=7.2 Score=39.96 Aligned_cols=30 Identities=23% Similarity=0.232 Sum_probs=26.3
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
.|+|+|+|+.|+.++..|...| +|++++..
T Consensus 197 ~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~ 227 (369)
T 1uuf_A 197 KVGVVGIGGLGHMGIKLAHAMGAHVVAFTTS 227 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5999999999999998888889 98888854
No 431
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=58.42 E-value=8.1 Score=35.20 Aligned_cols=31 Identities=23% Similarity=0.515 Sum_probs=28.2
Q ss_pred CEEEECc-chHHHHHHHHHHhcC-CeEEEEecC
Q 006387 90 DFSVIGS-GVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVlVIGg-G~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
-|+|+|+ |..|...+..|.++| +|+++.+..
T Consensus 5 ~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 5 KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 4899998 999999999999999 999998864
No 432
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=58.36 E-value=10 Score=37.78 Aligned_cols=32 Identities=25% Similarity=0.370 Sum_probs=28.9
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
..|.|||+|.-|...|..+++.| +|+++++..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 46999999999999999999999 999998753
No 433
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=58.36 E-value=6 Score=41.19 Aligned_cols=31 Identities=26% Similarity=0.379 Sum_probs=26.8
Q ss_pred cCEEEECcchHHHHHHHHHHhcC--CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG--TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~ 119 (647)
-.|+|||+|..|..+|..|...| +|+++++.
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~ 200 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRT 200 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCSEEEEECSS
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 45999999999999999999888 68887763
No 434
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=58.14 E-value=8.1 Score=35.87 Aligned_cols=30 Identities=27% Similarity=0.516 Sum_probs=27.5
Q ss_pred EEEECc-chHHHHHHHHHHhcC-CeEEEEecC
Q 006387 91 FSVIGS-GVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 91 VlVIGg-G~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
|+|+|+ |..|...+..|.++| +|+++.+..
T Consensus 3 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 899998 999999999999999 999998753
No 435
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=58.05 E-value=5.8 Score=39.08 Aligned_cols=29 Identities=24% Similarity=0.463 Sum_probs=24.5
Q ss_pred CEEEECcchHHHHHHHHHHhcCCeEEEEe
Q 006387 90 DFSVIGSGVAGLCYALEVAKHGTVAVITK 118 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G~V~llEk 118 (647)
.++|+|+|..|..+|..|++.|+|+++++
T Consensus 130 ~vlV~GaGgiG~aia~~L~~~G~V~v~~r 158 (287)
T 1nvt_A 130 NIVIYGAGGAARAVAFELAKDNNIIIANR 158 (287)
T ss_dssp EEEEECCSHHHHHHHHHHTSSSEEEEECS
T ss_pred EEEEECchHHHHHHHHHHHHCCCEEEEEC
Confidence 59999999999999999998885666654
No 436
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=57.72 E-value=6.8 Score=39.50 Aligned_cols=32 Identities=25% Similarity=0.450 Sum_probs=29.0
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
+..|.|||+|.-|...|..|++.| +|.++++.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 467999999999999999999999 99999864
No 437
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=57.46 E-value=7.6 Score=38.74 Aligned_cols=30 Identities=23% Similarity=0.368 Sum_probs=27.0
Q ss_pred CEEEECcchHHHHHHHHHHhcC--CeEEEEec
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG--TVAVITKA 119 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~ 119 (647)
.|.|||+|..|...|..++..| +|+++|..
T Consensus 4 kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~ 35 (309)
T 1ur5_A 4 KISIIGAGFVGSTTAHWLAAKELGDIVLLDIV 35 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 5999999999999999999988 78888864
No 438
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=57.34 E-value=4 Score=41.11 Aligned_cols=43 Identities=23% Similarity=0.351 Sum_probs=35.5
Q ss_pred ccCceeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHHHhh
Q 006387 448 NVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHK 492 (647)
Q Consensus 448 ~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~ 492 (647)
-+||||++|-.+ .-++|.+|.+- -++..+++|++||+.|.+.+
T Consensus 282 ~~~~~~~~g~~~-~~~~~~~r~g~-~fg~m~~sg~~~a~~~~~~~ 324 (326)
T 2gjc_A 282 GVDNMYFAGMEV-AELDGLNRMGP-TFGAMALSGVHAAEQILKHF 324 (326)
T ss_dssp TSTTEEECTHHH-HHHHTCCBCCS-CCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCEEECChHH-HHhcCCCCCCh-hhhhhhhhhHHHHHHHHHHh
Confidence 799999999987 57889888753 35667889999999988765
No 439
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=57.34 E-value=6.8 Score=40.05 Aligned_cols=31 Identities=23% Similarity=0.375 Sum_probs=27.3
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
-.|+|+|+|..|+.++..|...| +|+++++.
T Consensus 182 ~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~ 213 (366)
T 2cdc_A 182 RKVLVVGTGPIGVLFTLLFRTYGLEVWMANRR 213 (366)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHTCEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 35999999999999999998889 99988864
No 440
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=56.95 E-value=8.4 Score=39.31 Aligned_cols=30 Identities=20% Similarity=0.341 Sum_probs=27.3
Q ss_pred EEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 91 FSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 91 VlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
|+|||+|..|...|..|.+.| +|++++...
T Consensus 2 iliiG~g~~g~~~~~a~~~~G~~v~~~~~~~ 32 (369)
T 3aw8_A 2 IGILGGGQLGRMLALAGYPLGLSFRFLDPSP 32 (369)
T ss_dssp EEEECCSHHHHHHHHHHTTBTCCEEEEESCT
T ss_pred EEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 899999999999999999999 999998653
No 441
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=56.94 E-value=8.4 Score=38.14 Aligned_cols=31 Identities=16% Similarity=0.444 Sum_probs=28.2
Q ss_pred CEEEEC-cchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 90 DFSVIG-SGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVlVIG-gG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
.|.||| .|.-|.+.|..+++.| +|.++++..
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 599999 9999999999999999 999998643
No 442
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=56.57 E-value=7.3 Score=36.58 Aligned_cols=31 Identities=16% Similarity=0.352 Sum_probs=27.3
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEE-EEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAV-ITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~l-lEk~ 119 (647)
..|.|||+|.-|...|..+++.| +|++ +++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~ 56 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRG 56 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence 47999999999999999999999 9887 6653
No 443
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=56.16 E-value=7 Score=38.65 Aligned_cols=32 Identities=22% Similarity=0.218 Sum_probs=29.6
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
..|.|||.|.-|...|..+++.| +|+++++.+
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 47999999999999999999999 999998865
No 444
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=55.96 E-value=9 Score=38.73 Aligned_cols=32 Identities=22% Similarity=0.147 Sum_probs=27.6
Q ss_pred cCEEEECc-chHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGS-GVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGg-G~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
-.|||+|+ |..|+.++..|...| +|+++++..
T Consensus 171 ~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~ 204 (347)
T 2hcy_A 171 HWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGE 204 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECST
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCH
Confidence 35999999 899999999999899 999988643
No 445
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=55.59 E-value=8.2 Score=39.28 Aligned_cols=30 Identities=23% Similarity=0.248 Sum_probs=26.6
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
.|+|+|+|+.|+.++..|...| +|++++..
T Consensus 183 ~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~ 213 (357)
T 2cf5_A 183 RGGILGLGGVGHMGVKIAKAMGHHVTVISSS 213 (357)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 5999999999999998888889 99888864
No 446
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=55.45 E-value=8.2 Score=38.25 Aligned_cols=31 Identities=19% Similarity=0.301 Sum_probs=28.3
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
..|.|||.|.-|...|..+++.| +|+++++.
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 46999999999999999999999 99999864
No 447
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=55.42 E-value=7.3 Score=39.29 Aligned_cols=31 Identities=19% Similarity=0.095 Sum_probs=26.8
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
--|+|+|+|..|+.++..|...| +|+.++..
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~ 199 (340)
T 3s2e_A 168 QWVVISGIGGLGHVAVQYARAMGLRVAAVDID 199 (340)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 35999999999999998888889 99988753
No 448
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=55.33 E-value=6.5 Score=39.39 Aligned_cols=33 Identities=24% Similarity=0.156 Sum_probs=28.7
Q ss_pred cccCEEEECcc-hHHHHHHHHHHhcC-CeEEEEec
Q 006387 87 KYFDFSVIGSG-VAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 87 ~~~DVlVIGgG-~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
....|+|||+| ..|..+|..|...| .|+++++.
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 34679999999 67999999999999 99999875
No 449
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=55.22 E-value=8.5 Score=38.42 Aligned_cols=30 Identities=27% Similarity=0.349 Sum_probs=26.7
Q ss_pred CEEEECc-chHHHHHHHHHHhcC-CeEEEEec
Q 006387 90 DFSVIGS-GVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVlVIGg-G~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
+|+|+|+ |..|+.++..|...| +|+.++..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~ 180 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGR 180 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCC
Confidence 4999998 999999998888899 99998854
No 450
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=55.20 E-value=7.2 Score=38.26 Aligned_cols=31 Identities=23% Similarity=0.445 Sum_probs=28.5
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
.|.|||.|.-|...|..+++.| +|++.++.+
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 5899999999999999999999 999998754
No 451
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=55.10 E-value=9.1 Score=38.80 Aligned_cols=30 Identities=30% Similarity=0.431 Sum_probs=25.9
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
.|+|+|+|..|+.++..|...| +|+++++.
T Consensus 171 ~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~ 201 (352)
T 1e3j_A 171 TVLVIGAGPIGLVSVLAAKAYGAFVVCTARS 201 (352)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEcCC
Confidence 5999999999999998888889 98888753
No 452
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=55.00 E-value=6.6 Score=40.74 Aligned_cols=28 Identities=29% Similarity=0.334 Sum_probs=26.0
Q ss_pred CEEEECcchHHHHHHHHHHh-cC-CeEEEE
Q 006387 90 DFSVIGSGVAGLCYALEVAK-HG-TVAVIT 117 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~-~G-~V~llE 117 (647)
.|.|||+|.-|...|..|++ .| +|++++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 58999999999999999998 49 999998
No 453
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=54.94 E-value=8.8 Score=39.36 Aligned_cols=32 Identities=22% Similarity=0.323 Sum_probs=26.7
Q ss_pred cCEEEECcchHHHHHHHHHHhcC--CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG--TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~~ 120 (647)
-.|+|+|+|+.|+.++..|...| +|++++..+
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~ 228 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDS 228 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCH
Confidence 46999999999999998888888 588887543
No 454
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=54.92 E-value=9.4 Score=38.21 Aligned_cols=31 Identities=29% Similarity=0.416 Sum_probs=27.6
Q ss_pred cCEEEECcchHHHHHHHHHHhcC--CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG--TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~ 119 (647)
-.|.|||+|..|...|+.++..| .|+++|..
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 46999999999999999999988 68888875
No 455
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=54.92 E-value=8.7 Score=37.32 Aligned_cols=31 Identities=13% Similarity=0.245 Sum_probs=28.4
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
.|+|+|+|..|...+..|.++| +|+++.+..
T Consensus 7 ~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 7 TLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp EEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 5999999999999999999999 999998754
No 456
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=54.71 E-value=11 Score=37.82 Aligned_cols=30 Identities=27% Similarity=0.247 Sum_probs=26.7
Q ss_pred CEEEECc-chHHHHHHHHHHhcC-CeEEEEec
Q 006387 90 DFSVIGS-GVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVlVIGg-G~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
.|+|+|+ |..|+.++..|...| +|+++++.
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~ 184 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGN 184 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESS
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5999998 999999999888889 99888864
No 457
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=54.48 E-value=7.1 Score=40.62 Aligned_cols=29 Identities=24% Similarity=0.419 Sum_probs=26.6
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
.|.|||.|.-|+..|..+++ | +|+++++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECC
Confidence 48899999999999999999 9 99999874
No 458
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=54.42 E-value=7.9 Score=40.62 Aligned_cols=31 Identities=19% Similarity=0.451 Sum_probs=27.8
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
..|.|||.|.-|+..|..+++ | +|+++++.+
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 469999999999999999998 9 999998753
No 459
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=54.39 E-value=8.6 Score=40.18 Aligned_cols=32 Identities=22% Similarity=0.390 Sum_probs=28.5
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
..|+|||+|.-|...+..|.+.| +|++++..+
T Consensus 36 ~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~ 68 (419)
T 4e4t_A 36 AWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDP 68 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 46999999999999999999999 999998543
No 460
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=54.39 E-value=8.8 Score=37.33 Aligned_cols=30 Identities=20% Similarity=0.453 Sum_probs=26.9
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
.|.|||+|.-|...|..+.+.| +|+++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 3889999999999999999999 89988764
No 461
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=54.18 E-value=9.4 Score=38.25 Aligned_cols=31 Identities=23% Similarity=0.358 Sum_probs=28.0
Q ss_pred cCEEEECcchHHHHHHHHHHhcC---CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG---TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G---~V~llEk~ 119 (647)
..|.|||+|..|...|+.++..+ .|+++|..
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 41 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 57999999999999999999987 58899864
No 462
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=54.15 E-value=11 Score=40.31 Aligned_cols=34 Identities=35% Similarity=0.532 Sum_probs=30.7
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
.+..|.|||.|.-|...|..++++| +|++.++..
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3568999999999999999999999 999998764
No 463
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=54.09 E-value=16 Score=38.60 Aligned_cols=56 Identities=7% Similarity=0.086 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHcC-------CCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcc
Q 006387 215 EIERALLEAVVSD-------PNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGA 280 (647)
Q Consensus 215 ~~~~~L~~~~~~~-------~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~ 280 (647)
.+...|.+.+.+. .+++|+.++.|++|..++++ +. |. ..+|+ +++|+.||+|++..
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~----v~-v~---~~~g~--~~~ad~vI~a~~~~ 269 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGG----VT-VK---TEDNS--VYSADYVMVSASLG 269 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSC----EE-EE---ETTSC--EEEESEEEECSCHH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCc----EE-EE---ECCCC--EEEcCEEEEecCHH
Confidence 4566776666542 26789999999999886432 32 32 24564 58999999999853
No 464
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=54.08 E-value=11 Score=35.79 Aligned_cols=30 Identities=27% Similarity=0.368 Sum_probs=26.9
Q ss_pred EEEECc-chHHHHHHHHHHhcC-CeEEEEecC
Q 006387 91 FSVIGS-GVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 91 VlVIGg-G~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
|||.|| |.-|...|..|+++| +|+++.+..
T Consensus 4 vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~ 35 (255)
T 2dkn_A 4 IAITGSASGIGAALKELLARAGHTVIGIDRGQ 35 (255)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCh
Confidence 789987 888999999999999 999998864
No 465
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=53.81 E-value=10 Score=40.41 Aligned_cols=34 Identities=26% Similarity=0.478 Sum_probs=30.0
Q ss_pred cccCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 87 ~~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
...+|.|||.|.-|...|..+++.| +|++.++..
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 3468999999999999999999999 999998753
No 466
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=53.67 E-value=7.3 Score=39.31 Aligned_cols=30 Identities=17% Similarity=0.155 Sum_probs=26.7
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
.|+|+|+|..|+.++..|...| +|+++++.
T Consensus 167 ~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~ 197 (339)
T 1rjw_A 167 WVAIYGIGGLGHVAVQYAKAMGLNVVAVDIG 197 (339)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 5999999999999999998899 99888753
No 467
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=53.48 E-value=10 Score=38.02 Aligned_cols=30 Identities=17% Similarity=0.141 Sum_probs=26.6
Q ss_pred CEEEECc-chHHHHHHHHHHhcC-CeEEEEec
Q 006387 90 DFSVIGS-GVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVlVIGg-G~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
-|+|+|+ |..|+.++..|+..| +|+++++.
T Consensus 148 ~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~ 179 (333)
T 1v3u_A 148 TVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGS 179 (333)
T ss_dssp EEEEESTTBHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEecCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 4999997 999999999999999 99988753
No 468
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=53.18 E-value=8.1 Score=40.48 Aligned_cols=32 Identities=28% Similarity=0.156 Sum_probs=28.6
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
--|+|||.|..|..+|..|...| +|++.|..+
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp 280 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDP 280 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 46999999999999999999999 999998643
No 469
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=53.03 E-value=7.6 Score=43.54 Aligned_cols=33 Identities=21% Similarity=0.166 Sum_probs=29.7
Q ss_pred cCEEEEC--cchHHHHHHHHHHhcC-CeEEEEecCC
Q 006387 89 FDFSVIG--SGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVlVIG--gG~AGl~AA~~aa~~G-~V~llEk~~~ 121 (647)
-.|+||| +|..|+-+|..+++.| +|+++++.+.
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~ 559 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQ 559 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccc
Confidence 3599999 9999999999999999 9999998654
No 470
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=52.87 E-value=9.4 Score=38.84 Aligned_cols=31 Identities=26% Similarity=0.232 Sum_probs=27.5
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC-CeEEEEe
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITK 118 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk 118 (647)
..-|+|+|.|..|..+|..|.+.| +|++.|.
T Consensus 175 GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~ 206 (355)
T 1c1d_A 175 GLTVLVQGLGAVGGSLASLAAEAGAQLLVADT 206 (355)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEeC
Confidence 356999999999999999999999 9997763
No 471
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=52.80 E-value=12 Score=39.57 Aligned_cols=56 Identities=11% Similarity=-0.036 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 215 EIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 215 ~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
.+.+.|.+.+ |++|+.+++|++|..++ + . +.|...+..+|+ +++|+.||+|++...
T Consensus 239 ~l~~~l~~~l----g~~i~~~~~V~~i~~~~-~---~-~~v~~~~~~~g~--~~~ad~vV~a~~~~~ 294 (478)
T 2ivd_A 239 VLIDALAASL----GDAAHVGARVEGLARED-G---G-WRLIIEEHGRRA--ELSVAQVVLAAPAHA 294 (478)
T ss_dssp HHHHHHHHHH----GGGEESSEEEEEEECC------C-CEEEEEETTEEE--EEECSEEEECSCHHH
T ss_pred HHHHHHHHHh----hhhEEcCCEEEEEEecC-C---e-EEEEEeecCCCc--eEEcCEEEECCCHHH
Confidence 4666666655 57899999999998763 3 2 234432212333 589999999998653
No 472
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=52.79 E-value=15 Score=36.51 Aligned_cols=32 Identities=41% Similarity=0.595 Sum_probs=29.0
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
..|.|||.|.-|...|..+++.| +|++.++..
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 57999999999999999999999 999998653
No 473
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=52.70 E-value=9.4 Score=38.84 Aligned_cols=31 Identities=16% Similarity=0.108 Sum_probs=26.6
Q ss_pred cCEEEECcchHHHHHHHHHHhc-C-CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKH-G-TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~-G-~V~llEk~ 119 (647)
-.|+|+|+|+.|+.++..|... | +|++++..
T Consensus 188 ~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~ 220 (359)
T 1h2b_A 188 AYVAIVGVGGLGHIAVQLLKVMTPATVIALDVK 220 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 3599999999999999888888 9 99888753
No 474
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=52.43 E-value=12 Score=39.13 Aligned_cols=52 Identities=13% Similarity=0.017 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcc
Q 006387 215 EIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGA 280 (647)
Q Consensus 215 ~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~ 280 (647)
.+.+.|.+.+ |++|+.+++|++|..+ ++ .. +.+. . +|+ ++.|+.||+|++..
T Consensus 216 ~l~~~l~~~l----g~~i~~~~~V~~i~~~-~~---~~--v~v~-~-~~~--~~~ad~VI~a~p~~ 267 (453)
T 2yg5_A 216 QVSIRMAEAL----GDDVFLNAPVRTVKWN-ES---GA--TVLA-D-GDI--RVEASRVILAVPPN 267 (453)
T ss_dssp HHHHHHHHHH----GGGEECSCCEEEEEEE-TT---EE--EEEE-T-TTE--EEEEEEEEECSCGG
T ss_pred HHHHHHHHhc----CCcEEcCCceEEEEEe-CC---ce--EEEE-E-CCe--EEEcCEEEEcCCHH
Confidence 4555565543 6899999999999876 33 21 2222 2 343 58999999999864
No 475
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=52.17 E-value=9.9 Score=42.85 Aligned_cols=32 Identities=22% Similarity=0.274 Sum_probs=29.1
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
..|.|||+|.-|...|..+++.| +|+++|+..
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 35999999999999999999999 999999753
No 476
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=52.09 E-value=11 Score=38.56 Aligned_cols=31 Identities=32% Similarity=0.497 Sum_probs=27.9
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
.|+|||+|..|...|..|.+.| +|++++..+
T Consensus 3 ~Ililg~g~~g~~~~~a~~~~G~~v~~~~~~~ 34 (380)
T 3ax6_A 3 KIGIIGGGQLGKMMTLEAKKMGFYVIVLDPTP 34 (380)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4999999999999999999999 999998754
No 477
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=51.85 E-value=10 Score=36.77 Aligned_cols=30 Identities=20% Similarity=0.138 Sum_probs=26.7
Q ss_pred EEEECc---chHHHHHHHHHHhcC-CeEEEEecC
Q 006387 91 FSVIGS---GVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 91 VlVIGg---G~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
|||.|+ |.-|...|..++++| +|+++.+..
T Consensus 9 vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~ 42 (275)
T 2pd4_A 9 GLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE 42 (275)
T ss_dssp EEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST
T ss_pred EEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 899997 588999999999999 999998764
No 478
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=51.67 E-value=12 Score=39.22 Aligned_cols=30 Identities=23% Similarity=0.459 Sum_probs=27.0
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC----CeEEEE
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG----TVAVIT 117 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G----~V~llE 117 (647)
...|+|+|+|.||..+|..|.+.| +|.|++
T Consensus 186 ~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 186 EITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 357999999999999999999988 488998
No 479
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=51.66 E-value=12 Score=37.98 Aligned_cols=30 Identities=17% Similarity=0.298 Sum_probs=26.7
Q ss_pred cCEEEECc-chHHHHHHHHHHhcC---CeEEEEe
Q 006387 89 FDFSVIGS-GVAGLCYALEVAKHG---TVAVITK 118 (647)
Q Consensus 89 ~DVlVIGg-G~AGl~AA~~aa~~G---~V~llEk 118 (647)
..|.|||+ |..|..+|+.++..| .|+++|.
T Consensus 9 ~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi 42 (343)
T 3fi9_A 9 EKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDP 42 (343)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECS
T ss_pred CEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeC
Confidence 46999997 999999999999888 6899985
No 480
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=51.66 E-value=8.3 Score=38.62 Aligned_cols=32 Identities=22% Similarity=0.418 Sum_probs=28.8
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
..|.|||.|.-|...|..+++.| +|+++++.+
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 46999999999999999999999 999998753
No 481
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=51.62 E-value=12 Score=39.87 Aligned_cols=32 Identities=28% Similarity=0.486 Sum_probs=29.1
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
.+|.|||.|.-|...|..+++.| +|+++++..
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 46999999999999999999999 999998754
No 482
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=51.48 E-value=9.1 Score=38.65 Aligned_cols=30 Identities=17% Similarity=0.047 Sum_probs=26.1
Q ss_pred cCEEEECcchHHHHHHHHHHhc--C-CeEEEEe
Q 006387 89 FDFSVIGSGVAGLCYALEVAKH--G-TVAVITK 118 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~--G-~V~llEk 118 (647)
-.|+|+|+|..|+.++..|... | +|++++.
T Consensus 172 ~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~ 204 (344)
T 2h6e_A 172 PVVIVNGIGGLAVYTIQILKALMKNITIVGISR 204 (344)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeC
Confidence 3599999999999999888888 9 9888874
No 483
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=51.28 E-value=11 Score=37.90 Aligned_cols=33 Identities=27% Similarity=0.280 Sum_probs=28.4
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC--CeEEEEecC
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAE 120 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk~~ 120 (647)
...|.|||+|..|.+.|..++..| .|+|+|...
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 346999999999999999999988 688888654
No 484
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=51.22 E-value=9.7 Score=37.17 Aligned_cols=30 Identities=23% Similarity=0.272 Sum_probs=26.8
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
.|.|||.|.-|...|..+++ | +|+++++..
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 48999999999999999999 9 999998643
No 485
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=51.07 E-value=13 Score=37.68 Aligned_cols=31 Identities=19% Similarity=0.228 Sum_probs=26.1
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-C-eEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-T-VAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~-V~llEk~ 119 (647)
-.|+|+|+|..|+.++..|...| + |++++..
T Consensus 181 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~ 213 (363)
T 3m6i_A 181 DPVLICGAGPIGLITMLCAKAAGACPLVITDID 213 (363)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 36999999999999998888889 6 7777753
No 486
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=51.04 E-value=13 Score=37.56 Aligned_cols=32 Identities=25% Similarity=0.348 Sum_probs=28.4
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
..|.|||.|.-|.+.|..+++.| +|++.++..
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 35999999999999999999999 999888653
No 487
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=50.95 E-value=29 Score=36.56 Aligned_cols=56 Identities=5% Similarity=-0.082 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCcc
Q 006387 215 EIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGA 280 (647)
Q Consensus 215 ~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~ 280 (647)
.+.+.|.+.+.+ .+|+.+++|++|..++ + .+. |...+ .++..+++||.||+|+...
T Consensus 240 ~l~~~l~~~l~~---~~i~~~~~V~~i~~~~-~---~v~-v~~~~--g~~~~~~~ad~vI~a~p~~ 295 (489)
T 2jae_A 240 RIYYAFQDRIGT---DNIVFGAEVTSMKNVS-E---GVT-VEYTA--GGSKKSITADYAICTIPPH 295 (489)
T ss_dssp HHHHHHHHHHCG---GGEETTCEEEEEEEET-T---EEE-EEEEE--TTEEEEEEESEEEECSCHH
T ss_pred HHHHHHHHhcCC---CeEEECCEEEEEEEcC-C---eEE-EEEec--CCeEEEEECCEEEECCCHH
Confidence 466777776632 6799999999998863 3 343 33322 2334479999999999743
No 488
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=50.88 E-value=12 Score=39.78 Aligned_cols=30 Identities=43% Similarity=0.716 Sum_probs=28.1
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
+|.|||.|.-|...|..+++.| +|+++++.
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~ 33 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRT 33 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 6999999999999999999999 99999875
No 489
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=50.81 E-value=9 Score=38.67 Aligned_cols=31 Identities=19% Similarity=0.206 Sum_probs=27.1
Q ss_pred cCEEEECc-chHHHHHHHHHHhcC-CeEEEEec
Q 006387 89 FDFSVIGS-GVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGg-G~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
-.|+|+|+ |..|+.++..|...| +|+++++.
T Consensus 161 ~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~ 193 (342)
T 4eye_A 161 ETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNR 193 (342)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 35999998 999999999999999 99988864
No 490
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=50.71 E-value=9.7 Score=38.13 Aligned_cols=31 Identities=23% Similarity=0.439 Sum_probs=26.7
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC---CeEEEEe
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG---TVAVITK 118 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G---~V~llEk 118 (647)
...|.|||+|..|.+.|+.++..+ .|+++|.
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di 39 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDL 39 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 357999999999999999999877 5778875
No 491
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=50.70 E-value=11 Score=36.88 Aligned_cols=30 Identities=20% Similarity=0.361 Sum_probs=27.5
Q ss_pred CEEEECc-chHHHHHHHHHHhcC-CeEEEEec
Q 006387 90 DFSVIGS-GVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVlVIGg-G~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
.|.|||+ |.-|...|..+++.| +|+++++.
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSSSEEEEECCS
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 5999999 999999999999999 99988864
No 492
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=50.60 E-value=12 Score=37.78 Aligned_cols=31 Identities=19% Similarity=0.435 Sum_probs=27.1
Q ss_pred ccCEEEECcchHHHHHHHHHHhcC---CeEEEEe
Q 006387 88 YFDFSVIGSGVAGLCYALEVAKHG---TVAVITK 118 (647)
Q Consensus 88 ~~DVlVIGgG~AGl~AA~~aa~~G---~V~llEk 118 (647)
...|.|||+|..|.+.|+.++.+| .++|+|.
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di 52 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADELALVDV 52 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeC
Confidence 357999999999999999999887 5888885
No 493
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=50.60 E-value=12 Score=37.45 Aligned_cols=30 Identities=33% Similarity=0.310 Sum_probs=26.6
Q ss_pred CEEEECc-chHHHHHHHHHHhcC-CeEEEEec
Q 006387 90 DFSVIGS-GVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVlVIGg-G~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
.|+|+|+ |..|+.++..|...| +|+++++.
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~ 183 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGK 183 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 5999998 999999999888889 99888864
No 494
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=50.54 E-value=11 Score=37.02 Aligned_cols=31 Identities=26% Similarity=0.319 Sum_probs=27.8
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEecC
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~~ 120 (647)
.|.|||.|.-|...|..+++.| +|+++++..
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4889999999999999999999 999998753
No 495
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=50.51 E-value=9.4 Score=37.68 Aligned_cols=31 Identities=16% Similarity=0.101 Sum_probs=27.0
Q ss_pred cCEEEECc-chHHHHHHHHHHhcC-CeEEEEec
Q 006387 89 FDFSVIGS-GVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGg-G~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
-.|+|+|+ |..|+.++..|...| +|+++++.
T Consensus 127 ~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~ 159 (302)
T 1iz0_A 127 EKVLVQAAAGALGTAAVQVARAMGLRVLAAASR 159 (302)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35999998 999999999888899 99988864
No 496
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=50.46 E-value=12 Score=37.99 Aligned_cols=31 Identities=23% Similarity=0.375 Sum_probs=24.9
Q ss_pred CEEEECcchHHHHH-HHHH-HhcC-C-eEEEEecC
Q 006387 90 DFSVIGSGVAGLCY-ALEV-AKHG-T-VAVITKAE 120 (647)
Q Consensus 90 DVlVIGgG~AGl~A-A~~a-a~~G-~-V~llEk~~ 120 (647)
.|+|+|+|+.|+.+ +..| ...| + |+.++...
T Consensus 175 ~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~ 209 (357)
T 2b5w_A 175 SAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRD 209 (357)
T ss_dssp EEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCC
T ss_pred EEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCc
Confidence 59999999999999 6666 5578 7 88888643
No 497
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=50.46 E-value=9.5 Score=39.87 Aligned_cols=31 Identities=26% Similarity=0.207 Sum_probs=28.3
Q ss_pred cCEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
..|+|||.|..|..+|..|...| +|++.|..
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~ 243 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFGARVVVTEVD 243 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCC
Confidence 46999999999999999999999 99998864
No 498
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=50.40 E-value=21 Score=37.22 Aligned_cols=54 Identities=4% Similarity=0.040 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCCeEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006387 215 EIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 215 ~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~ 281 (647)
.+.+.|.+.+. .++|+.+++|++|..++++ + .|.. .+|+ ++.|+.||+|+....
T Consensus 236 ~l~~~l~~~l~---~~~i~~~~~V~~i~~~~~~----~-~v~~---~~g~--~~~ad~vi~a~p~~~ 289 (470)
T 3i6d_A 236 TLVEEIEKQLK---LTKVYKGTKVTKLSHSGSC----Y-SLEL---DNGV--TLDADSVIVTAPHKA 289 (470)
T ss_dssp HHHHHHHHTCC---SEEEECSCCEEEEEECSSS----E-EEEE---SSSC--EEEESEEEECSCHHH
T ss_pred HHHHHHHHhcC---CCEEEeCCceEEEEEcCCe----E-EEEE---CCCC--EEECCEEEECCCHHH
Confidence 34455544432 1799999999999886433 2 2322 4564 489999999998653
No 499
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=50.39 E-value=9 Score=37.84 Aligned_cols=30 Identities=27% Similarity=0.355 Sum_probs=27.7
Q ss_pred CEEEECcchHHHHHHHHHHhcC-CeEEEEec
Q 006387 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVlVIGgG~AGl~AA~~aa~~G-~V~llEk~ 119 (647)
.|.|||.|.-|...|..+++.| +|+++++.
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEEeecHHHHHHHHHHHhCCCeEEEEcCC
Confidence 5899999999999999999999 99999864
No 500
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=50.05 E-value=12 Score=37.82 Aligned_cols=30 Identities=23% Similarity=0.297 Sum_probs=25.2
Q ss_pred cCEEEECcchHHHHHHHHHHhcC--CeEEEEe
Q 006387 89 FDFSVIGSGVAGLCYALEVAKHG--TVAVITK 118 (647)
Q Consensus 89 ~DVlVIGgG~AGl~AA~~aa~~G--~V~llEk 118 (647)
-.|+|+|+|+.|+.++..|...| +|++++.
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~ 199 (352)
T 3fpc_A 168 DTVCVIGIGPVGLMSVAGANHLGAGRIFAVGS 199 (352)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCSSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCcEEEEECC
Confidence 45999999999999888888888 5777764
Done!