BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006388
(647 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 1096 bits (2835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/647 (80%), Positives = 583/647 (90%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MPF DGVSWNL ISG+A++GS +DAV+VY LMLKD NL+RITFSTMLI+ S RCVDL
Sbjct: 97 MPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDL 156
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQI+G ILKFGFGS VFVGSPLVDMY KLGLIYDAKR FDE+PE+N+VM NTMITGL+R
Sbjct: 157 GRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMR 216
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G++EES+RLF G+K++DSISWT MITGLMQNGLEREA+D+FREMRL G AMDQFTFGSV
Sbjct: 217 CGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSV 276
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LTACG LLAL EGKQIHA++IR DHKDNVFVGSALVDMY KC+SIK AE+VF+ M KNV
Sbjct: 277 LTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNV 336
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SWTAMLVGYGQNG SEEAVKIF MQRNG+EPDDFTLGSVISSCANLASLEEG QFH R
Sbjct: 337 ISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCR 396
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+LV+GLISFITVSNAL+T YGKCG+ E+SHRLF EMN+RDEVSWTAL++GYA+FGKANET
Sbjct: 397 ALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANET 456
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
I LFE+ML+HGLKPD VT IGVLSACSRAGLVEKG YFE M+KE+GI PI DH TC+ID
Sbjct: 457 IGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIID 516
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAGRLEEA++FIN MP PD +GWATLLSSCR+HG++EIGKWAA+SL+ L+P NPAS
Sbjct: 517 LLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPAS 576
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLSS+YASKGKWD V+QLRR MR+K VRK+PG SWIKYK +VH+FSADD SSP+ QI
Sbjct: 577 YVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSADDQSSPFLGQI 636
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
YAELEKLN KMI+EGYVPDMSSVLHDVE SEKIKMLNHHSEKLAIAFGL+F+PPGLPIRV
Sbjct: 637 YAELEKLNYKMIEEGYVPDMSSVLHDVEESEKIKMLNHHSEKLAIAFGLIFVPPGLPIRV 696
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+KNLRVC DCHNATK+ISKITQREILVRDAVRFHLFK+G CSCGDFW
Sbjct: 697 IKNLRVCGDCHNATKFISKITQREILVRDAVRFHLFKDGTCSCGDFW 743
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 220/452 (48%), Gaps = 39/452 (8%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
++++L + + +++H ILK F+ + L+ Y KLG + A FD +P
Sbjct: 8 YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
+ N+ +NT+++ + GL+ + +++F M +D +SW I+G G +A+ +++
Sbjct: 68 QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127
Query: 165 M-RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
M + + +++ TF ++L C ++ G+QI+ I++ +VFVGS LVDMY K
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLG 187
Query: 224 SIKYAESVFRTMAWKNVV-------------------------------SWTAMLVGYGQ 252
I A+ F M +NVV SWT M+ G Q
Sbjct: 188 LIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQ 247
Query: 253 NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITV 312
NG EA+ +F M+ G D FT GSV+++C +L +L EG Q H + T + V
Sbjct: 248 NGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFV 307
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGL 372
+ALV Y KC +I+ + +F M ++ +SWTA++ GY + G + E + +F +M +G+
Sbjct: 308 GSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGV 367
Query: 373 KPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAK 432
+PD+ TL V+S+C+ +E+G F G+ +I + + G E +
Sbjct: 368 EPDDFTLGSVISSCANLASLEEGAQ-FHCRALVSGLISFITVSNALITLYGKCGSTENSH 426
Query: 433 SFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
+M D + W LL+ G + GK
Sbjct: 427 RLFTEMNI-RDEVSWTALLA-----GYAQFGK 452
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 1087 bits (2810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/647 (79%), Positives = 585/647 (90%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP DGVSWN LISG+ +GSV +AVK YN M+KDG+ NL+RITFSTML++ SS+ CVDL
Sbjct: 97 MPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGCVDL 156
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQIHG I+KFGFG+YVFVGS LVDMYAK+GL+ A + FDE+ E+N+VMYNTMITGLLR
Sbjct: 157 GRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLR 216
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G+V++S+RLF GMK++DSISWTTMITGL+QNGLE EA+DLFR+MR EG+AMDQ+TFGSV
Sbjct: 217 SGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSV 276
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LTACGGL AL+EGK+IH IIR+ + NVFVGSALVDMYCKC+S++YAE+VF+ MA KNV
Sbjct: 277 LTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNV 336
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWTAMLVGYGQNG SEEAV++FC+MQRNGIEPDDFTLGSVISSCANLASLEEG QFH +
Sbjct: 337 VSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQ 396
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+LV+GLISFITVSNAL+T YGKCG+IEDS++LF+EM+ RDEVSWTALVSGYA+FGKANET
Sbjct: 397 ALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANET 456
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
IDLFE+ML GLKPD VT I VLSACSRAGLVE+G+ YFE M+K++GI P DHYTCMID
Sbjct: 457 IDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMID 516
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+ RAGRLEEAK+FINKMPF PD+IGWATLLSSCR++GN EIGKWAAESLLELDP NPA
Sbjct: 517 LFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQNPAG 576
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
Y+LLSSIYA+KGKW +V+QLRR MREKG RK+PG SWIKYKS+V+IFSADD SSP+SDQI
Sbjct: 577 YILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWIKYKSKVYIFSADDQSSPFSDQI 636
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
YAELEKLN KMI+EGYVPD SSVLHDVE SEK+KMLNHHSEKLAIAFGLLFIP GLPIRV
Sbjct: 637 YAELEKLNHKMIEEGYVPDASSVLHDVEDSEKMKMLNHHSEKLAIAFGLLFIPHGLPIRV 696
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VKNLRVC DCHNATKYISKI+QREILVRDAVRFHLFK+G CSCGDFW
Sbjct: 697 VKNLRVCGDCHNATKYISKISQREILVRDAVRFHLFKDGTCSCGDFW 743
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 1066 bits (2758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/648 (77%), Positives = 579/648 (89%), Gaps = 1/648 (0%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLK-DGLGNLSRITFSTMLIMSSSRRCVD 59
MP DGVSWN LISG+A G + +VK YNLMLK DG NL+RITFST+LI++S R CV
Sbjct: 101 MPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASKRGCVK 160
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
LGRQIHGH++KFGF SYVFVGSPLVDMY+K+G+I A++ FDELPEKN+VMYNT+I GL+
Sbjct: 161 LGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLM 220
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
R G VE+S+RLF M+++DSISWT+MITG QNGL+R+AID+FREM+LE L MDQ+TFGS
Sbjct: 221 RCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGS 280
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VLTACGG++AL+EGKQ+HA+IIR D+KDN+FV SALVDMYCKCK+IK AE+VF+ M KN
Sbjct: 281 VLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKN 340
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VVSWTAMLVGYGQNG SEEAVK F +MQ+ GIEPDDFTLGSVISSCANLASLEEG QFH
Sbjct: 341 VVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHA 400
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
R+L +GLISFITVSNALVT YGKCG+IEDSHRLFNE++ +DEV+WTALVSGYA+FGKANE
Sbjct: 401 RALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANE 460
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
TI LFE ML+HGLKPD+VT IGVLSACSRAGLVEKG FE M+ E+GI PI DHYTCMI
Sbjct: 461 TIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMI 520
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+ SRAGR+EEA++FINKMPF PDAI WATLLSSCR +GN++IGKWAAE L+ELDP+N A
Sbjct: 521 DLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTA 580
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
SYVLLSS+YA+KGKW+ V++LR+ MR+KG+RK+PGCSWIKYK++VH+FSADD S+P+SDQ
Sbjct: 581 SYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQ 640
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY+ELEKLN KMIKEGYVPDM+SVLHDV SEKIKMLNHHSEKLAIAFGLLFIPPGLPIR
Sbjct: 641 IYSELEKLNYKMIKEGYVPDMNSVLHDVGDSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 700
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VVKNLRVCSDCHNATKYISKIT REILVRD RFHLFK+G CSCGDFW
Sbjct: 701 VVKNLRVCSDCHNATKYISKITNREILVRDTARFHLFKDGTCSCGDFW 748
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 219/437 (50%), Gaps = 40/437 (9%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+ +H HI+K F+ + L+ YAKLG I A + FD++P N+ +NT+++ +
Sbjct: 28 AKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSK 87
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEG-LAMDQFTFG 178
G V E LF M +D +SW ++I+G GL +++ + M + +G +++ TF
Sbjct: 88 LGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFS 147
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
++L ++ G+QIH +++ VFVGS LVDMY K I A VF + K
Sbjct: 148 TLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEK 207
Query: 239 NVV-------------------------------SWTAMLVGYGQNGCSEEAVKIFCNMQ 267
NVV SWT+M+ G+ QNG +A+ IF M+
Sbjct: 208 NVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMK 267
Query: 268 RNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIE 327
++ D +T GSV+++C + +L+EG Q H + T I V++ALV Y KC NI+
Sbjct: 268 LENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIK 327
Query: 328 DSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS 387
+ +F +M ++ VSWTA++ GY + G + E + F M +G++PD+ TL V+S+C+
Sbjct: 328 SAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCA 387
Query: 388 RAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGW 447
+E+G F G+ ++ + + G +E++ N++ F D + W
Sbjct: 388 NLASLEEGAQ-FHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISF-KDEVTW 445
Query: 448 ATLLSSCRIHGNVEIGK 464
L+S G + GK
Sbjct: 446 TALVS-----GYAQFGK 457
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 141/343 (41%), Gaps = 74/343 (21%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM- 235
+ ++L C + K +H+ II+ F+ + L+ Y K SI YA VF M
Sbjct: 12 YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71
Query: 236 -----AWKNV-------------------------VSWTAMLVGYGQNGCSEEAVKIFCN 265
+W + VSW +++ GY G ++VK +
Sbjct: 72 HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNL 131
Query: 266 MQRN--GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGK- 322
M +N + T +++ + ++ G Q HG + G +S++ V + LV Y K
Sbjct: 132 MLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKM 191
Query: 323 ------------------------------CGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
CG +EDS RLF EM RD +SWT++++G+
Sbjct: 192 GMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFT 251
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
+ G + ID+F +M L+ D+ T VL+AC +++G+ V Y IR +
Sbjct: 252 QNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQ-----VHAYIIRTDY 306
Query: 413 DH----YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
+ ++D+ + ++ A++ KM + + W +L
Sbjct: 307 KDNIFVASALVDMYCKCKNIKSAEAVFKKMT-CKNVVSWTAML 348
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 1063 bits (2750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/647 (76%), Positives = 573/647 (88%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN LIS +A G + +VK YNLML +G NL+RI STMLI++S + CV L
Sbjct: 101 MPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILASKQGCVHL 160
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+HGH++KFGF SYVFVGSPLVDMY+K GL++ A++ FDE+PEKN+VMYNT+I GL+R
Sbjct: 161 GLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMR 220
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+E+SR+LF M++KDSISWT MI G QNGL+REAIDLFREMRLE L MDQ+TFGSV
Sbjct: 221 CSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSV 280
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LTACGG++AL+EGKQ+HA+IIR D++DN+FVGSALVDMYCKCKSIK AE+VFR M KNV
Sbjct: 281 LTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNV 340
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWTAMLVGYGQNG SEEAVKIFC+MQ NGIEPDDFTLGSVISSCANLASLEEG QFH R
Sbjct: 341 VSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCR 400
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+LV+GLISFITVSNALVT YGKCG+IEDSHRLF+EM+ DEVSWTALVSGYA+FGKANET
Sbjct: 401 ALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANET 460
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LFE ML+HG KPD+VT IGVLSACSRAGLV+KG FE M+KE+ I PI DHYTCMID
Sbjct: 461 LRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMID 520
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+ SRAGRLEEA+ FINKMPF PDAIGWA+LLSSCR H N+EIGKWAAESLL+L+P+N AS
Sbjct: 521 LFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTAS 580
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
Y+LLSSIYA+KGKW+ V+ LR+ MR+KG+RK+PGCSWIKYK++VHIFSADD S+P+SDQI
Sbjct: 581 YILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQSNPFSDQI 640
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y+ELEKLN KM++EGYVPDM+SVLHDV+ SEKIKMLNHHSEKLAIAFGL+FIPPGLPIRV
Sbjct: 641 YSELEKLNYKMVQEGYVPDMNSVLHDVDDSEKIKMLNHHSEKLAIAFGLIFIPPGLPIRV 700
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VKNLRVC DCHNATKYISKITQREILVRDA RFHLFK+G CSCGDFW
Sbjct: 701 VKNLRVCGDCHNATKYISKITQREILVRDAARFHLFKDGRCSCGDFW 747
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 225/448 (50%), Gaps = 41/448 (9%)
Query: 55 RRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTM 114
+ C D ++IH HI+K +F+ + LV YAK I A+R FD++P++N+ +NT+
Sbjct: 23 KHCRDT-KKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTL 81
Query: 115 ITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG-LAMD 173
++ + + E R+F M +D +SW ++I+ G +++ + M G ++
Sbjct: 82 LSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLN 141
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK------------ 221
+ ++L + G Q+H +++ + VFVGS LVDMY K
Sbjct: 142 RIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFD 201
Query: 222 -------------------CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKI 262
C I+ + +F M K+ +SWTAM+ G+ QNG EA+ +
Sbjct: 202 EMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDL 261
Query: 263 FCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGK 322
F M+ +E D +T GSV+++C + +L+EG Q H + T I V +ALV Y K
Sbjct: 262 FREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCK 321
Query: 323 CGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGV 382
C +I+ + +F +MN ++ VSWTA++ GY + G + E + +F M ++G++PD+ TL V
Sbjct: 322 CKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSV 381
Query: 383 LSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPP 442
+S+C+ +E+G F G+ ++ + + G +E++ ++M +
Sbjct: 382 ISSCANLASLEEGAQ-FHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSY-V 439
Query: 443 DAIGWATLLSSCRIHGNVEIGKWAAESL 470
D + W L+S G + GK A E+L
Sbjct: 440 DEVSWTALVS-----GYAQFGK-ANETL 461
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 138/335 (41%), Gaps = 73/335 (21%)
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C L + K+IH II+ +F+ + LV Y K I YA VF M +N+ SW
Sbjct: 19 CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSW 78
Query: 244 TAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDD---------FTLGSV------------ 281
+L Y + C E ++F M R+ + + F L SV
Sbjct: 79 NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPF 138
Query: 282 ------ISSCANLAS----LEEGTQFHGRSLVTGLISFITVSNALVTFYGK--------- 322
+S+ LAS + G Q HG + G S++ V + LV Y K
Sbjct: 139 NLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQ 198
Query: 323 ----------------------CGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
C IEDS +LF +M +D +SWTA+++G+ + G E
Sbjct: 199 AFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREA 258
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY----T 416
IDLF +M L+ D+ T VL+AC +++G+ V Y IR + +
Sbjct: 259 IDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQ-----VHAYIIRTDYQDNIFVGS 313
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
++D+ + ++ A++ KM + + W +L
Sbjct: 314 ALVDMYCKCKSIKSAETVFRKMN-CKNVVSWTAML 347
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 1053 bits (2723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/647 (76%), Positives = 575/647 (88%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP HD VSWN L+SG+A +G ++++V+VYN+MLKDG NL+RITFSTMLI+SS+R VDL
Sbjct: 97 MPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDL 156
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQIHG I KFG+ SY+FVGSPLVDMYAK G I DA R F+E+PEKNIV+YNTMITGLLR
Sbjct: 157 GRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLR 216
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ E+ +LF M +KDSISWTT+ITGL QNGL +EA+D F+EM +EG MDQFTFGSV
Sbjct: 217 CRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSV 276
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LTACGG LAL+EGKQIHA+IIR D++DN+FVGSAL+DMYCKC+++KYAE+VFR M KNV
Sbjct: 277 LTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNV 336
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SWTAMLVGYGQNG SEEAV+IFC+MQRN I PDDFTLGSVISSCANLASLEEG QFHG+
Sbjct: 337 ISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQ 396
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+L +GLI F+TVSNAL+T YGKCG++E +H+LF+EM +RDEVSWTALVSGYA+FGKANET
Sbjct: 397 ALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANET 456
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
I LFE ML+HG+ PD VT +GVLSACSRAGLVEKG HYFE MVKE+ I PI DHYTCMID
Sbjct: 457 ISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMID 516
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+LSRAGRLEEAK+FIN+MPF PDAIGWATLLSSCR++GN+EIGKWAAESL +L+P NPAS
Sbjct: 517 LLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQNPAS 576
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
Y+LLSSIYA+KGKWD V++LR+ MRE GV+K+PG SWIKYK++VHIFSADD SSP+SDQI
Sbjct: 577 YILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIFSADDRSSPFSDQI 636
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
YA+LE L KMI+EGYVPDMS VLHDVE SEKIKMLNHHSEKLAIAFGLLFIP GL IRV
Sbjct: 637 YAKLESLYLKMIEEGYVPDMSFVLHDVEKSEKIKMLNHHSEKLAIAFGLLFIPDGLQIRV 696
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VKNLRVC DCHNATKYIS+ITQREILVRDAVRFHLFK+G CSCGDFW
Sbjct: 697 VKNLRVCGDCHNATKYISRITQREILVRDAVRFHLFKDGVCSCGDFW 743
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 219/435 (50%), Gaps = 39/435 (8%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+++H I++ F+ + L++ Y KLG + +A+ FD +P+ N+ +NT+++ +
Sbjct: 25 KKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYSKL 84
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG-LAMDQFTFGSV 180
G +++ +R+F M + D +SW ++++G NGL E++ ++ M +G + +++ TF ++
Sbjct: 85 GYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTM 144
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK------------------- 221
L ++ G+QIH I + ++ +FVGS LVDMY K
Sbjct: 145 LILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNI 204
Query: 222 ------------CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN 269
C+ I AE +F M K+ +SWT ++ G QNG +EAV F M
Sbjct: 205 VVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIE 264
Query: 270 GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
G D FT GSV+++C +L+EG Q H + T I V +AL+ Y KC N++ +
Sbjct: 265 GFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYA 324
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
+F +M ++ +SWTA++ GY + G + E + +F M + + PD+ TL V+S+C+
Sbjct: 325 EAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANL 384
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
+E+G F G+ +I + + G LE A ++M D + W
Sbjct: 385 ASLEEGAQ-FHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKI-RDEVSWTA 442
Query: 450 LLSSCRIHGNVEIGK 464
L+S G + GK
Sbjct: 443 LVS-----GYAQFGK 452
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 937 bits (2423), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/648 (67%), Positives = 540/648 (83%), Gaps = 1/648 (0%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLK-DGLGNLSRITFSTMLIMSSSRRCVD 59
M D VS+N +I+G + GS AV+VY +L+ D SRIT STM++ +S+
Sbjct: 98 MTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRA 157
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
LG+Q H IL+ GFG+ FVGSPLVDMYAK+ L+ DAKR FDE+ KN+VMYNTMITGLL
Sbjct: 158 LGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLL 217
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
R +VEE+RRLF M D+DSI+WTTM+TG QNGLE EA+++FR MR +G+A+DQ+TFGS
Sbjct: 218 RCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGS 277
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+LTACG L ALE+GKQIHA+IIR + DNVFVGSALVDMY KC+SIK AE+VFR M KN
Sbjct: 278 ILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKN 337
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
++SWTA++VGYGQNGCSEEAV++F MQR+GI+PDD+TLGSVISSCANLASLEEG QFH
Sbjct: 338 IISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHC 397
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+LV+GL+ +ITVSNALVT YGKCG+IED+HRLF+EM+ D+VSWTALVSGYA+FG+A E
Sbjct: 398 LALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKE 457
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
TIDLFEKML+ G+KPD VT IGVLSACSRAG VEKGR YF M K++GI PI DHYTCMI
Sbjct: 458 TIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMI 517
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+ SR+G+L+EA+ FI +MP PDAIGW TLLS+CR+ G++EIGKWAAE+LLE+DP NPA
Sbjct: 518 DLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNPA 577
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
SYVLL S++A+KG+W+ V+QLRR MR++ V+K+PGCSWIKYK++VHIFSADD S P S
Sbjct: 578 SYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPCSKG 637
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY +LE LN KM++EGY PD+SSVLHDV ++K+ M++HHSEKLAIAFGL+F+P +PIR
Sbjct: 638 IYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLIFVPQEMPIR 697
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+VKNLRVC DCHNATK+ISKIT R+ILVRDAVRFH F +G CSCGDFW
Sbjct: 698 IVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGVCSCGDFW 745
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 134/490 (27%), Positives = 222/490 (45%), Gaps = 68/490 (13%)
Query: 83 LVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISW 142
L+ Y K G A+R FD +P N+ YN +++ L L+ + LF M +D +S+
Sbjct: 47 LLTAYGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSY 106
Query: 143 TTMITGLMQNGLEREAIDLFREMRLEGLAM--DQFTFGSVLTACGGLLALEEGKQIHAFI 200
+I G G +A+ ++ + ++ + T +++ A L GKQ H I
Sbjct: 107 NAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQI 166
Query: 201 IRNDHKDNVFVGSALVDMYCK-------------------------------CKSIKYAE 229
+R N FVGS LVDMY K CK ++ A
Sbjct: 167 LRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEAR 226
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
+F M ++ ++WT M+ G+ QNG EA++IF M+ GI D +T GS++++C L+
Sbjct: 227 RLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALS 286
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
+LE+G Q H + T + V +ALV Y KC +I+ + +F M ++ +SWTAL+
Sbjct: 287 ALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIV 346
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR------------H 397
GY + G + E + +F +M G+ PD+ TL V+S+C+ +E+G H
Sbjct: 347 GYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMH 406
Query: 398 YFEI---MVKEYGI-------------RPIHDH--YTCMIDILSRAGRLEEAKSFINKM- 438
Y + +V YG HD +T ++ ++ GR +E KM
Sbjct: 407 YITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKML 466
Query: 439 --PFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS--YVLLSSIYASKGKW 494
PD + + +LS+C G VE G+ S+ + P Y + +Y+ GK
Sbjct: 467 AKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKL 526
Query: 495 DHVSQLRRTM 504
+ + M
Sbjct: 527 KEAEEFIKQM 536
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 930 bits (2404), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/647 (66%), Positives = 537/647 (82%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VS+N LI+G +S GS +V++Y +L++ +RIT S M++++S+ L
Sbjct: 105 MPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRAL 164
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +H +L+ GFG+Y FVGSPLVDMYAK+GLI DA+R F E+ K +VMYNT+ITGLLR
Sbjct: 165 GHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLR 224
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
++E+++ LF+ M D+DSI+WTTM+TGL QNGL+ EA+D+FR MR EG+ +DQ+TFGS+
Sbjct: 225 CKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSI 284
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LTACG L ALEEGKQIHA+I R ++DNVFVGSALVDMY KC+SI+ AE+VFR M +N+
Sbjct: 285 LTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNI 344
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SWTAM+VGYGQN CSEEAV+ F MQ +GI+PDDFTLGSVISSCANLASLEEG QFH
Sbjct: 345 ISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCL 404
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+LV+GL+ +ITVSNALVT YGKCG+IED+HRLF+EM+ D+VSWTALV+GYA+FGKA ET
Sbjct: 405 ALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKET 464
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
IDLFEKML++GLKPD VT IGVLSACSRAGLVEKG YF+ M K++GI PI DHYTCMID
Sbjct: 465 IDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMID 524
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+ SR+GR +EA+ FI +MP PDA GWATLLSSCR+ GN+EIGKWAAE+LLE DP NPAS
Sbjct: 525 LYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPAS 584
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLL S++A+KG+W V+ LRR MR++ V+K+PGCSWIKYK++VHIFSADD S P+S +I
Sbjct: 585 YVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRI 644
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y +LE LN KM +EGY PD+SSVLHDV ++K+ M++HHSEKLAIAFGL+F+P +PIR+
Sbjct: 645 YEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRI 704
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VKNLRVC DCHNATK+ISKIT R+ILVRDAVRFH F +G CSCGDFW
Sbjct: 705 VKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 214/443 (48%), Gaps = 40/443 (9%)
Query: 55 RRCVDLGRQIHGHILK-FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNT 113
R V + +H ILK F F+ + L+ YAK G + A+R FDE+P+ N+ N
Sbjct: 25 RTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNA 84
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE-MRLEGLAM 172
+++ L LV + RLF M ++D++S+ +ITG G ++ L+R +R E +
Sbjct: 85 LLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRP 144
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK----------- 221
+ T +++ L G +H ++R FVGS LVDMY K
Sbjct: 145 TRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVF 204
Query: 222 --------------------CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVK 261
CK I+ A+ +F+ M ++ ++WT M+ G QNG EA+
Sbjct: 205 QEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALD 264
Query: 262 IFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYG 321
+F M+ G+ D +T GS++++C LA+LEEG Q H T + V +ALV Y
Sbjct: 265 VFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYS 324
Query: 322 KCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIG 381
KC +I + +F M R+ +SWTA++ GY + + E + F +M G+KPD+ TL
Sbjct: 325 KCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGS 384
Query: 382 VLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFP 441
V+S+C+ +E+G F + G+ ++ + + G +E+A ++M F
Sbjct: 385 VISSCANLASLEEGAQ-FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSF- 442
Query: 442 PDAIGWATLLSSCRIHGNVEIGK 464
D + W L++ G + GK
Sbjct: 443 HDQVSWTALVT-----GYAQFGK 460
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 924 bits (2387), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/647 (66%), Positives = 534/647 (82%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VS+N LI+G +S GS +V++Y +L++ +RIT S M++++S+ L
Sbjct: 105 MPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRAL 164
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +H +L+ GFG+Y FVGSPLVDMYAK+GLI DA+R F E+ K +VMYNT+ITGLLR
Sbjct: 165 GHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLR 224
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
++E+++ LF+ M D+DSI+WTTM+TGL QNGL+ EA+D+FR MR EG+ +DQ+TFGS+
Sbjct: 225 CKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSI 284
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LTACG L A EEGKQIHA+I R ++DNVFVGSALVDMY KC+SI+ AE+VFR M +N+
Sbjct: 285 LTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNI 344
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SWTAM+VGYGQN CSEEAV+ F MQ +GI+PDDFTLGSVISSCANLASLEEG QFH
Sbjct: 345 ISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCL 404
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+LV+GL+ +ITVSNALVT YGKCG+IED+HRLF+EM+ D+VSWTALV+GYA+FGKA ET
Sbjct: 405 ALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKET 464
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
IDLFEKML +GLKPD VT IGVLSACSRAGLVEKG YF+ M K++ I PI DHYTCMID
Sbjct: 465 IDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMID 524
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+ SR+GR +EA+ FI +MP PDA GWATLLSSCR+ GN+EIGKWAAE+LLE DP NPAS
Sbjct: 525 LYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPAS 584
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLL S++A+KG+W V+ LRR MR++ V+K+PGCSWIKYK++VHIFSADD S P+S +I
Sbjct: 585 YVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRI 644
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y +LE LN KM +EGY PD+SSVLHDV ++K+ M++HHSEKLAIAFGL+F+P +PIR+
Sbjct: 645 YEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRI 704
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VKNLRVC DCHNATK+ISKIT R+ILVRDAVRFH F +G CSCGDFW
Sbjct: 705 VKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 213/443 (48%), Gaps = 40/443 (9%)
Query: 55 RRCVDLGRQIHGHILK-FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNT 113
R V + +H ILK F F+ + L+ YAK G + A+R FDE+P+ N+ N
Sbjct: 25 RTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNA 84
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE-MRLEGLAM 172
+++ L LV + RLF M ++D++S+ +ITG G ++ L+R +R E +
Sbjct: 85 LLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRP 144
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK----------- 221
+ T +++ L G +H ++R FVGS LVDMY K
Sbjct: 145 TRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVF 204
Query: 222 --------------------CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVK 261
CK I+ A+ +F+ M ++ ++WT M+ G QNG EA+
Sbjct: 205 QEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALD 264
Query: 262 IFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYG 321
+F M+ G+ D +T GS++++C LA+ EEG Q H T + V +ALV Y
Sbjct: 265 VFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYS 324
Query: 322 KCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIG 381
KC +I + +F M R+ +SWTA++ GY + + E + F +M G+KPD+ TL
Sbjct: 325 KCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGS 384
Query: 382 VLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFP 441
V+S+C+ +E+G F + G+ ++ + + G +E+A ++M F
Sbjct: 385 VISSCANLASLEEGAQ-FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSF- 442
Query: 442 PDAIGWATLLSSCRIHGNVEIGK 464
D + W L++ G + GK
Sbjct: 443 HDQVSWTALVT-----GYAQFGK 460
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 921 bits (2381), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/648 (67%), Positives = 533/648 (82%), Gaps = 1/648 (0%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLG-NLSRITFSTMLIMSSSRRCVD 59
M D VS+N +I+G + G+ AV++Y+ +L+ G SRIT S M++ +S+
Sbjct: 98 MAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRA 157
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
LGRQ H IL+ GFG FVGSPLV MYAK+GLI DAKR FDE+ KN+VMYNTMITGLL
Sbjct: 158 LGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLL 217
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
R +VEE+RRLF M D+D I+WTTM+TG QNGLE +A++ FR MR +G+A+DQ+TFGS
Sbjct: 218 RCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGS 277
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+LTACG L ALE+GKQIHA+IIR + DNVFVGSALVDMY KC+SIK AE+ FR M+ KN
Sbjct: 278 ILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKN 337
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
++SWTA++VGYGQNGCSEEAV++F MQR+GI+PDDFTLGSVISSCANLASLEEG QFH
Sbjct: 338 IISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHC 397
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+LV+GL+ +ITVSNALVT YGKCG+IED+HRLF+EM D+VSWTALV+GYA+FG+A E
Sbjct: 398 LALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKE 457
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
TIDLFEKML+ +KPD VT IGVLSACSRAG VEKG YF M K++GI PI DHYTCMI
Sbjct: 458 TIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMI 517
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+ SR+GRL+EA+ FI +MP PDAIGW TLLS+CR+ G++EIG+WAAE+LLE+DP NPA
Sbjct: 518 DLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLEIDPQNPA 577
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
SYVLL S++A+KG W+ V+QLRR MR++ V+K+PGCSWIKYK++VHIFSADD S P+S
Sbjct: 578 SYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSKG 637
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY +LE LN KM++EGY PD+SSVLHDV ++K+ M++HHSEKLAIAFGL+F+P +PIR
Sbjct: 638 IYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLMFVPHEMPIR 697
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+VKNLRVC DCHNATK ISKIT R+ILVRDAVRFH F NG CSCGDFW
Sbjct: 698 IVKNLRVCVDCHNATKLISKITGRDILVRDAVRFHKFSNGVCSCGDFW 745
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 194/403 (48%), Gaps = 35/403 (8%)
Query: 83 LVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISW 142
L+ Y K G A+R FD P N+ YN +++ L L+++ LF M +D++S+
Sbjct: 47 LLTAYGKAGRHARARRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSY 106
Query: 143 TTMITGLMQNGLEREAIDLFREMRLEGLAM--DQFTFGSVLTACGGLLALEEGKQIHAFI 200
+I G G A+ L+ + G ++ + T +++ A L G+Q H I
Sbjct: 107 NAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQI 166
Query: 201 IRNDHKDNVFVGSALVDMYCK-------------------------------CKSIKYAE 229
+R N FVGS LV MY K CK ++ A
Sbjct: 167 LRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEAR 226
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
+F M ++ ++WT M+ G+ QNG +A+ F M+ GI D +T GS++++C L+
Sbjct: 227 RLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALS 286
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
+LE+G Q H + T + V +ALV Y KC +I+ + F M+ ++ +SWTAL+
Sbjct: 287 ALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIV 346
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
GY + G + E + +F +M G+ PD+ TL V+S+C+ +E+G F + G+
Sbjct: 347 GYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQ-FHCLALVSGLM 405
Query: 410 PIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
++ + + G +E+A ++M F D + W L++
Sbjct: 406 HYITVSNALVTLYGKCGSIEDAHRLFDEMLF-HDQVSWTALVT 447
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 920 bits (2379), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/647 (66%), Positives = 531/647 (82%), Gaps = 1/647 (0%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P DGV+WN+LI G++ G V AVK YN M++D NL+R+T TML +SSS V L
Sbjct: 98 LPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSL 157
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIHG ++K GF SY+ VGSPL+ MYA +G I DAK+ F L ++N VMYN+++ GLL
Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLA 217
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G++E++ +LFRGM +KDS+SW MI GL QNGL +EAI+ FREM+++GL MDQ+ FGSV
Sbjct: 218 CGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSV 276
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L ACGGL A+ EGKQIHA IIR + +D+++VGSAL+DMYCKCK + YA++VF M KNV
Sbjct: 277 LPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNV 336
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWTAM+VGYGQ G +EEAVKIF +MQR+GI+PD +TLG IS+CAN++SLEEG+QFHG+
Sbjct: 337 VSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGK 396
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ +GLI ++TVSN+LVT YGKCG+I+DS RLFNEMNVRD VSWTA+VS YA+FG+A ET
Sbjct: 397 AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVET 456
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
I LF+KM+ HGLKPD VTL GV+SACSRAGLVEKG+ YF++M EYGI P HY+CMID
Sbjct: 457 IQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMID 516
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+ SR+GRLEEA FIN MPFPPDAIGW TLLS+CR GN+EIGKWAAESL+ELDP++PA
Sbjct: 517 LFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAG 576
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
Y LLSSIYASKGKWD V+QLRR MREK V+K+PG SWIK+K ++H FSADD SSPY DQI
Sbjct: 577 YTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQI 636
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
YA+LE+LN K+I GY PD S V HDVE + K+KMLN+HSE+LAIAFGL+F+P G PIRV
Sbjct: 637 YAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRV 696
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCHNATK+IS +T REILVRDAVRFH FK+G CSCGDFW
Sbjct: 697 GKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 209/443 (47%), Gaps = 51/443 (11%)
Query: 55 RRCVDLG--------RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEK 106
++C+ LG + IHG+I++ F+ + +V YA + A+R FD +P+
Sbjct: 11 KQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQP 70
Query: 107 NIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR 166
N+ +N ++ + GL+ E F + D+D ++W +I G +GL A+ + M
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 167 LEGLA-MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK---- 221
+ A + + T ++L + GKQIH +I+ + + VGS L+ MY
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 222 ---------------------------CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNG 254
C I+ A +FR M K+ VSW AM+ G QNG
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNG 249
Query: 255 CSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSN 314
++EA++ F M+ G++ D + GSV+ +C L ++ EG Q H + T I V +
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 315 ALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKP 374
AL+ Y KC + + +F+ M ++ VSWTA+V GY + G+A E + +F M G+ P
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDP 369
Query: 375 DEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC----MIDILSRAGRLEE 430
D TL +SAC+ +E+G + + I HY ++ + + G +++
Sbjct: 370 DHYTLGQAISACANVSSLEEGSQFHGKAITSGLI-----HYVTVSNSLVTLYGKCGDIDD 424
Query: 431 AKSFINKMPFPPDAIGWATLLSS 453
+ N+M DA+ W ++S+
Sbjct: 425 STRLFNEMNV-RDAVSWTAMVSA 446
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 918 bits (2373), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/648 (66%), Positives = 537/648 (82%), Gaps = 1/648 (0%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLG-NLSRITFSTMLIMSSSRRCVD 59
+P D VS+N L++G + G+ A Y +L+D G SRIT S +++++S+
Sbjct: 103 LPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASALGDRA 162
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
LGRQ+H IL+ GFG+Y F GSPLVDMYAK+G I DA+R FDE+ KN+VM NTMITGLL
Sbjct: 163 LGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLL 222
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
R +V E+R LF ++++DSI+WTTM+TGL QNGLE EA+D+FR MR EG+ +DQ+TFGS
Sbjct: 223 RCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGS 282
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+LTACG L ALEEGKQIHA+I R ++DNVFVGSALVDMY KC+S++ AE+VFR M WKN
Sbjct: 283 ILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKN 342
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
++SWTAM+VGYGQNGC EEAV++F MQR+GI+PDDFTLGSVISSCANLASLEEG QFH
Sbjct: 343 IISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHC 402
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+LV+GL ++TVSNALVT YGKCG+IED+HRLF+EM+ D+VSWTALV GYA+FGKA E
Sbjct: 403 LALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKE 462
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
TIDLFEKMLS G+KPD VT IGVLSACSR+GLV+KGR YF M +++ I P+ DHYTCMI
Sbjct: 463 TIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMI 522
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+ SR+G L++A+ FI +MP PDA GWATLLS+CR+ G++EIGKWAAE+LL+LDP NPA
Sbjct: 523 DLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPA 582
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
SYVLL S++ASKG+W+ V++LRR MR++ V+K+PGCSWIKYK++VHIFSADD S P+S
Sbjct: 583 SYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSRT 642
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY +L+ LN KM++EGY PD+SSVLHDV +EK+ ML+HHSEKLAIAFGL+F+PP +PIR
Sbjct: 643 IYEKLQWLNSKMVEEGYKPDVSSVLHDVADAEKVHMLSHHSEKLAIAFGLIFVPPEMPIR 702
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+VKNLRVC DCHNATK+ISKIT R+ILVRDAVRFH F NG CSCGDFW
Sbjct: 703 IVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSNGICSCGDFW 750
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 210/441 (47%), Gaps = 45/441 (10%)
Query: 60 LGRQIHGHILK-FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
L +H IL+ S ++ + L+ YA GL+ A+R FD +P +N+V N++++ L
Sbjct: 28 LTAAVHALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSAL 87
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREA----IDLFREMRLEGLAMDQ 174
R GLV + RLF + +D++S+ ++ G + G A + L R+ G+ +
Sbjct: 88 ARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDE--AGVRPSR 145
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
T V+ L G+Q+H I+R F GS LVDMY K I A VF
Sbjct: 146 ITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDE 205
Query: 235 MAWKNVV-------------------------------SWTAMLVGYGQNGCSEEAVKIF 263
M KNVV +WT M+ G QNG EA+ +F
Sbjct: 206 MEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVF 265
Query: 264 CNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKC 323
M+ G+ D +T GS++++C LA+LEEG Q H T + V +ALV Y KC
Sbjct: 266 RRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKC 325
Query: 324 GNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVL 383
++ + +F M ++ +SWTA++ GY + G E + +F +M G+KPD+ TL V+
Sbjct: 326 RSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVI 385
Query: 384 SACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPD 443
S+C+ +E+G F + G+RP ++ + + G +E+A ++M F D
Sbjct: 386 SSCANLASLEEGAQ-FHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSF-HD 443
Query: 444 AIGWATLLSSCRIHGNVEIGK 464
+ W L + G + GK
Sbjct: 444 QVSWTAL-----VMGYAQFGK 459
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 918 bits (2372), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/647 (67%), Positives = 534/647 (82%), Gaps = 1/647 (0%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P DGV+WN+LI G++ G V AVK YN M+KD NL+R+T TML +SSS V L
Sbjct: 95 LPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSL 154
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIHG ++K GF SY+ VGSPL+DMY+K+G I DAK+ F L ++N VMYNT++ GLL
Sbjct: 155 GKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLA 214
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G++E++ +LFRGM +KDS+SW+ MI GL QNG+E+EAI+ FREM++EGL MDQ+ FGSV
Sbjct: 215 CGMIEDALQLFRGM-EKDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSV 273
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L ACGGL A+ +G+QIHA IIR + +D+++VGSAL+DMYCKCK + YA++VF M KNV
Sbjct: 274 LPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNV 333
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWTAM+VGYGQ G + EAVKIF +MQR+GI+PD +TLG IS+CAN++SLEEG+QFHG+
Sbjct: 334 VSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGK 393
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ GLI +ITVSN+LVT YGKCG+I+DS RLFNEMNVRDEVSWTA+VS YA+FG+A E
Sbjct: 394 AITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEA 453
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
I LF+KM+ GLKPD VTL GV+SACSRAGLVEKG+ YFE+M+ EYGI P + HY+CMID
Sbjct: 454 IQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMID 513
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+ SR+GR+EEA FIN MPF PDAIGW TLLS+CR GN+EIGKWAAESL+ELDP++PA
Sbjct: 514 LFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAG 573
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
Y LLSSIYASKGKWD V+QLRR M+EK VRK+PG SWIK+K ++H FSADD SSPYSDQI
Sbjct: 574 YTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQSWIKWKGKLHSFSADDESSPYSDQI 633
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
YA+LE+L +K+I GY PD S V HDVE + KIKMLN HSE+LAIAFGL+F+P GLPIRV
Sbjct: 634 YAKLEELYQKIIDNGYKPDTSFVHHDVEEAVKIKMLNCHSERLAIAFGLIFVPSGLPIRV 693
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCHNATK+IS +T REILVRDAVRFH FK+G CSCGDFW
Sbjct: 694 GKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 740
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 134/480 (27%), Positives = 221/480 (46%), Gaps = 71/480 (14%)
Query: 55 RRCVDLG-----RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIV 109
++C+ LG + IHG+I++ F+ + +V YA + A+R FD +P+ N+
Sbjct: 11 KQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQPNLF 70
Query: 110 MYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE- 168
+N ++ + G + E R F + D+D ++W +I G +GL A+ + M +
Sbjct: 71 SWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDF 130
Query: 169 GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK------- 221
+ + T ++L + GKQIH +I+ + + VGS L+DMY K
Sbjct: 131 SSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDA 190
Query: 222 ------------------------CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSE 257
C I+ A +FR M K+ VSW+AM+ G QNG +
Sbjct: 191 KKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGME-KDSVSWSAMIKGLAQNGMEK 249
Query: 258 EAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALV 317
EA++ F M+ G++ D + GSV+ +C L ++ +G Q H + T L I V +AL+
Sbjct: 250 EAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALI 309
Query: 318 TFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEV 377
Y KC + + +F+ M ++ VSWTA+V GY + G+A E + +F M G+ PD
Sbjct: 310 DMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHY 369
Query: 378 TLIGVLSACSRAGLVEKGR------------HYFEI---MVKEYG-IRPIHD-------- 413
TL +SAC+ +E+G HY + +V YG I D
Sbjct: 370 TLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEM 429
Query: 414 ------HYTCMIDILSRAGRLEEAKSFINKM---PFPPDAIGWATLLSSCRIHGNVEIGK 464
+T M+ ++ GR EA +KM PD + ++S+C G VE G+
Sbjct: 430 NVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQ 489
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 138/341 (40%), Gaps = 72/341 (21%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
+ + + C GL A K IH IIR F+ + +V Y +S YA VF +
Sbjct: 6 YSAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIP 65
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPD--------------------- 274
N+ SW +L+ Y ++G E + F + R+G+ +
Sbjct: 66 QPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNT 125
Query: 275 ---DF-------TLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGK-- 322
DF TL +++ ++ + G Q HG+ + G S++ V + L+ Y K
Sbjct: 126 MMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVG 185
Query: 323 -----------------------------CGNIEDSHRLFNEMNVRDEVSWTALVSGYAK 353
CG IED+ +LF M +D VSW+A++ G A+
Sbjct: 186 CISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGME-KDSVSWSAMIKGLAQ 244
Query: 354 FGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
G E I+ F +M GLK D+ VL AC G + GR +++ + D
Sbjct: 245 NGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRT----NLQD 300
Query: 414 HY---TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
H + +ID+ + L AK+ ++M + + W ++
Sbjct: 301 HIYVGSALIDMYCKCKCLHYAKTVFDRMK-QKNVVSWTAMV 340
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/653 (66%), Positives = 527/653 (80%), Gaps = 6/653 (0%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLK-----DGLG-NLSRITFSTMLIMSSS 54
MP D VS+N LI+G + G+ A Y +L+ DG SRIT S M++ +S+
Sbjct: 102 MPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVMAASA 161
Query: 55 RRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTM 114
LGRQ+H I++ GFG+Y F SPLVDMYAK+GLI DAKR FDE+ KN+VMYNTM
Sbjct: 162 LGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTM 221
Query: 115 ITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
ITGLLR +VEE+R +F M D+DSI+WTTM+TGL QNGL+ EA+D+FR MR EG+ +DQ
Sbjct: 222 ITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQ 281
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
+TFGS+LTACG L A EEGKQIHA+ IR + N+FVGSALVDMY KC+SI+ AE+VFR
Sbjct: 282 YTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRR 341
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
M KN++SWTAM+VGYGQNGC EEAV++F MQ +GI+P+DFTLGSVISSCANLASLEEG
Sbjct: 342 MTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEG 401
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
QFH +LV+GL +ITVS+ALVT YGKCG+IED+HRLF+EM D+VS+TALVSGYA+F
Sbjct: 402 AQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQF 461
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
GKA ETIDLFEKML G+KP+ VT IGVLSACSR+GLVEKG YF M +++GI + DH
Sbjct: 462 GKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDH 521
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
YTCMID+ SR+GRL+EA+ FI +MP PDAIGWATLLS+CR+ G++EIGKWAAE+LL+ D
Sbjct: 522 YTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGDMEIGKWAAENLLKTD 581
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS 534
P NPASYVLL S++ASKG+W V+ LRR MR++ V+K+PGCSWIKYK+RVHIFSADD S
Sbjct: 582 PQNPASYVLLCSMHASKGEWSEVALLRRGMRDRQVKKEPGCSWIKYKNRVHIFSADDQSH 641
Query: 535 PYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPP 594
P+S IY +L+ LN KM +EGY PD+SSVLHDV +EK+ ML++HSEKLAIAFGL+F+P
Sbjct: 642 PFSGTIYEKLQWLNSKMAEEGYKPDVSSVLHDVADAEKVHMLSNHSEKLAIAFGLIFVPE 701
Query: 595 GLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+PIRVVKNLRVC DCHNATK+ISKIT R+ILVRDAVRFH F NG CSCGDFW
Sbjct: 702 EMPIRVVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSNGICSCGDFW 754
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 205/426 (48%), Gaps = 45/426 (10%)
Query: 77 VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKD 136
+V + L+ YA+ G + A+R FD +P+ N+ N +++ L L+ + RLF M
Sbjct: 45 TYVLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSALAHARLLPDMDRLFASMPQ 104
Query: 137 KDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD-------QFTFGSVLTACGGLLA 189
+D++S+ +I G G A +R + E +D + T ++ A L
Sbjct: 105 RDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVMAASALGD 164
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK---------------------------- 221
G+Q+H I+R F S LVDMY K
Sbjct: 165 RALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITG 224
Query: 222 ---CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
CK ++ A VF M ++ ++WT M+ G QNG EA+ +F M+ G+ D +T
Sbjct: 225 LLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTF 284
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
GS++++C LA+ EEG Q H ++ T I V +ALV Y KC +I + +F M
Sbjct: 285 GSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTC 344
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
++ +SWTA++ GY + G E + +F +M + G+KP++ TL V+S+C+ +E+G
Sbjct: 345 KNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQ- 403
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
F M G+RP + ++ + + G +E+A ++MPF D + + L+S G
Sbjct: 404 FHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPF-HDQVSYTALVS-----G 457
Query: 459 NVEIGK 464
+ GK
Sbjct: 458 YAQFGK 463
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/605 (65%), Positives = 500/605 (82%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VS+N LI+G +S GS +V++Y +L++ +RIT S M++++S+ L
Sbjct: 105 MPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRAL 164
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +H +L+ GFG+Y FVGSPLVDMYAK+GLI DA+R F E+ K +VMYNT+ITGLLR
Sbjct: 165 GHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLR 224
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
++E+++ LF+ M D+DSI+WTTM+TGL QNGL+ EA+D+FR MR EG+ +DQ+TFGS+
Sbjct: 225 CKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSI 284
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LTACG L ALEEGKQIHA+I R ++DNVFVGSALVDMY KC+SI+ AE+VFR M +N+
Sbjct: 285 LTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNI 344
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SWTAM+VGYGQN CSEEAV+ F MQ +GI+PDDFTLGSVISSCANLASLEEG QFH
Sbjct: 345 ISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCL 404
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+LV+GL+ +ITVSNALVT YGKCG+IED+HRLF+EM+ D+VSWTALV+GYA+FGKA ET
Sbjct: 405 ALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKET 464
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
IDLFEKML++GLKPD VT IGVLSACSRAGLVEKG YF+ M K++GI PI DHYTCMID
Sbjct: 465 IDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMID 524
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+ SR+GR +EA+ FI +MP PDA GWATLLSSCR+ GN+EIGKWAAE+LLE DP NPAS
Sbjct: 525 LYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPAS 584
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLL S++A+KG+W V+ LRR MR++ V+K+PGCSWIKYK++VHIFSADD S P+S +I
Sbjct: 585 YVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRI 644
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y +LE LN KM +EGY PD+SSVLHDV ++K+ M++HHSEKLAIAFGL+F+P +PIR+
Sbjct: 645 YEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRI 704
Query: 601 VKNLR 605
VKNLR
Sbjct: 705 VKNLR 709
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 214/443 (48%), Gaps = 40/443 (9%)
Query: 55 RRCVDLGRQIHGHILK-FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNT 113
R V + +H ILK F F+ + L+ YAK G + A+R FDE+P+ N+ N
Sbjct: 25 RTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNA 84
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE-MRLEGLAM 172
+++ L LV + RLF M ++D++S+ +ITG G ++ L+R +R E +
Sbjct: 85 LLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRP 144
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK----------- 221
+ T +++ L G +H ++R FVGS LVDMY K
Sbjct: 145 TRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVF 204
Query: 222 --------------------CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVK 261
CK I+ A+ +F+ M ++ ++WT M+ G QNG EA+
Sbjct: 205 QEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALD 264
Query: 262 IFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYG 321
+F M+ G+ D +T GS++++C LA+LEEG Q H T + V +ALV Y
Sbjct: 265 VFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYS 324
Query: 322 KCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIG 381
KC +I + +F M R+ +SWTA++ GY + + E + F +M G+KPD+ TL
Sbjct: 325 KCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGS 384
Query: 382 VLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFP 441
V+S+C+ +E+G F + G+ ++ + + G +E+A ++M F
Sbjct: 385 VISSCANLASLEEGAQ-FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSF- 442
Query: 442 PDAIGWATLLSSCRIHGNVEIGK 464
D + W L++ G + GK
Sbjct: 443 HDQVSWTALVT-----GYAQFGK 460
>gi|255547019|ref|XP_002514567.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546171|gb|EEF47673.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 515
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/416 (75%), Positives = 375/416 (90%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP DGVSWN ++SG+AS+GSV+DAVK YN M++DG+ NL+RITFSTMLI++SSR VDL
Sbjct: 100 MPNRDGVSWNTILSGYASYGSVSDAVKAYNSMMRDGVFNLNRITFSTMLILASSRELVDL 159
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQIHGHI+KFGFG YVFVGSPLVDMYAK GL+Y+AK+ FDE+P++N+VM+NTMITGLL+
Sbjct: 160 GRQIHGHIMKFGFGGYVFVGSPLVDMYAKTGLVYEAKKVFDEMPDRNVVMHNTMITGLLK 219
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G++E+S+RLF GMK++D+ISWTTMITGL+QNGLE EAID FR+MRL+G+ MDQ+TFGSV
Sbjct: 220 FGMMEDSKRLFHGMKERDNISWTTMITGLVQNGLEEEAIDFFRQMRLDGIGMDQYTFGSV 279
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LTACGGL AL EGKQ+HAFIIR+D DNVFVGSALVDMYCKCK ++YAE+VF+ M +KNV
Sbjct: 280 LTACGGLTALREGKQVHAFIIRSDCTDNVFVGSALVDMYCKCKILRYAEAVFKRMKYKNV 339
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWTA+LVGYGQNG SEEAVK+FC+MQRNGIEPDDFTLGSVISSCANLASLEEG QFH R
Sbjct: 340 VSWTAILVGYGQNGFSEEAVKVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCR 399
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+LV+GLIS ITVSNALVT YGKCG+IEDS RLFNEMN RDEVSWTAL+SGYA+FGKA ET
Sbjct: 400 ALVSGLISSITVSNALVTLYGKCGSIEDSDRLFNEMNFRDEVSWTALISGYAQFGKARET 459
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
I+LFE+ML+HGLKPD VT IGVL ACSRAGLV +G+ +F+ M++EYGI P+ + T
Sbjct: 460 IELFERMLAHGLKPDAVTFIGVLLACSRAGLVARGQQFFDSMLEEYGIIPVDNWST 515
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/445 (29%), Positives = 221/445 (49%), Gaps = 41/445 (9%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+++H HI+K F+ + L++ Y KLG I A+ FD +P++N +NT+++ +
Sbjct: 27 AKKLHCHIIKTLANPEPFLYNNLMNAYGKLGNIAYARHLFDGMPQRNSFSWNTILSAYSK 86
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL-AMDQFTFGS 179
G + + + +F M ++D +SW T+++G G +A+ + M +G+ +++ TF +
Sbjct: 87 SGHLPKMKEIFSLMPNRDGVSWNTILSGYASYGSVSDAVKAYNSMMRDGVFNLNRITFST 146
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L ++ G+QIH I++ VFVGS LVDMY K + A+ VF M +N
Sbjct: 147 MLILASSRELVDLGRQIHGHIMKFGFGGYVFVGSPLVDMYAKTGLVYEAKKVFDEMPDRN 206
Query: 240 VV-------------------------------SWTAMLVGYGQNGCSEEAVKIFCNMQR 268
VV SWT M+ G QNG EEA+ F M+
Sbjct: 207 VVMHNTMITGLLKFGMMEDSKRLFHGMKERDNISWTTMITGLVQNGLEEEAIDFFRQMRL 266
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIED 328
+GI D +T GSV+++C L +L EG Q H + + + V +ALV Y KC +
Sbjct: 267 DGIGMDQYTFGSVLTACGGLTALREGKQVHAFIIRSDCTDNVFVGSALVDMYCKCKILRY 326
Query: 329 SHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
+ +F M ++ VSWTA++ GY + G + E + +F M +G++PD+ TL V+S+C+
Sbjct: 327 AEAVFKRMKYKNVVSWTAILVGYGQNGFSEEAVKVFCDMQRNGIEPDDFTLGSVISSCAN 386
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
+E+G F G+ ++ + + G +E++ N+M F D + W
Sbjct: 387 LASLEEGAQ-FHCRALVSGLISSITVSNALVTLYGKCGSIEDSDRLFNEMNF-RDEVSWT 444
Query: 449 TLLSSCRIHGNVEIGKWAAESLLEL 473
L+S G + GK A +EL
Sbjct: 445 ALIS-----GYAQFGK--ARETIEL 462
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 281/682 (41%), Positives = 438/682 (64%), Gaps = 36/682 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSW +I G+ G +A+ ++ M+ D + ++ T + +L ++ C+ +
Sbjct: 105 MPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPP-TQFTLTNVLASCAAVECLGI 163
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR++H ++K G SY+ V + L++MYAK G AK FD + K+ +NTMI+ ++
Sbjct: 164 GRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQ 223
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM-DQFTFGS 179
GLV+ ++ F M ++D +SW MI+G Q+G +REA+D+F +M ++ + D+FT S
Sbjct: 224 SGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLAS 283
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV-------- 231
L+AC L L+ GKQIHA IIR + VG+AL+ MY K ++ A+ +
Sbjct: 284 ALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISN 343
Query: 232 -------------------------FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM 266
F ++ ++VV+WTAM+VGY QNG +++A+++F +M
Sbjct: 344 LDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSM 403
Query: 267 QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
+ G +P+++TL +++S ++LASL+ G Q H + +G S ++VSNAL+T Y K G+I
Sbjct: 404 IKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSI 463
Query: 327 EDSHRLFNEMN-VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
D+ +FN ++ RD ++WT+++ A+ G E + LFE+ML +G+KPD +T +GVLSA
Sbjct: 464 NDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSA 523
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
C+ GLVE+GR Y+ +M + I P HY CMID+ RAG L+EA +FI MP PD I
Sbjct: 524 CTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVI 583
Query: 446 GWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
W +LL+SC++H NVE+ + AAE LL ++P N +Y L+++Y++ G+W++ + +R++M+
Sbjct: 584 AWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSACGQWENAANIRKSMK 643
Query: 506 EKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLH 565
+KGV+KD G SW++ K++VHIF DD P D IY + K+ +++ K G+VPD SVLH
Sbjct: 644 DKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEMMAKIWKEIKKMGFVPDTESVLH 703
Query: 566 DVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREI 625
D+E K ++L+HHSEKLAIAFGL+ P +R++KNLRVC+DCH+A K+ISK+ REI
Sbjct: 704 DLEEELKEQILSHHSEKLAIAFGLICTPENTTLRIMKNLRVCNDCHSAIKFISKLVGREI 763
Query: 626 LVRDAVRFHLFKNGECSCGDFW 647
+VRDA RFH FKNG CSC D+W
Sbjct: 764 IVRDATRFHHFKNGLCSCRDYW 785
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 143/477 (29%), Positives = 232/477 (48%), Gaps = 66/477 (13%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ IH I+K G VF+ + L++ YAK G IYDA R FDE+P K++ +N +++G +
Sbjct: 32 GKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAK 91
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G +EE+ R+F M + DS+SWT MI G Q G AI +FREM + + QFT +V
Sbjct: 92 GGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNV 151
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS---------------- 224
L +C + L G+++H+F++++ + V ++L++MY K
Sbjct: 152 LASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKST 211
Query: 225 ---------------IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM-QR 268
+ A+ F M ++VVSW AM+ GY Q+G EA+ IF M
Sbjct: 212 SSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMD 271
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIE- 327
+ +PD FTL S +S+CANL +L+ G Q H + T +F V NAL++ Y K G +E
Sbjct: 272 SSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEI 331
Query: 328 --------------------------------DSHRLFNEMNVRDEVSWTALVSGYAKFG 355
+ R+F+ + VRD V+WTA++ GY + G
Sbjct: 332 AQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNG 391
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
+ ++LF M+ G KP+ TL +LS S ++ GR + +
Sbjct: 392 FNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSV-SVS 450
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLE 472
+I + +++G + +A+ N + + D I W +++ + HG E E +LE
Sbjct: 451 NALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLE 507
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 284/682 (41%), Positives = 420/682 (61%), Gaps = 36/682 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSW +I G+ G ++A+ ++ M+ + + S+ T S +L ++ + +D+
Sbjct: 102 MPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPP-SQFTVSNVLSSCAANQTLDI 160
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR+IH ++K G GS V V + L++MYAK G AK FD + KNI +N +I+ ++
Sbjct: 161 GRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQ 220
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQFTFGS 179
G E + F M D+D +SW +MI+G Q G EA+ +F +M E L D FT S
Sbjct: 221 SGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLAS 280
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK---------------- 223
+L+AC L L GKQIHA+I+R + + + VG+AL+ MY K
Sbjct: 281 ILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSN 340
Query: 224 -----------------SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM 266
++K A +F + ++VV+WTAM+VGY QNG +A+++F M
Sbjct: 341 LNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLM 400
Query: 267 QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
G EP+ +TL +++S ++L LE G Q H ++ G S +V+NAL+ Y K GNI
Sbjct: 401 VNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNI 460
Query: 327 EDSHRLFNEMNVRDE-VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+ R+F+ N + E VSWT+++ A+ G E I+LFE+MLS G+KPD +T +GVLSA
Sbjct: 461 NVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSA 520
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
C+ GLVE+GR Y+ +M + + I P HY CMID+ RAG L+EA FI MP PD I
Sbjct: 521 CTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNI 580
Query: 446 GWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
W +LL+SC+IH N ++ K AAE LL +DP N +Y+ L+++Y++ GKW++ +Q R+ M+
Sbjct: 581 AWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMK 640
Query: 506 EKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLH 565
++GVRK+ G SWI K+ VH F +D P D+IY + ++ ++ K G++PD SVLH
Sbjct: 641 DRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLH 700
Query: 566 DVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREI 625
D+E K ++L +HSEKLAIAFGLL P +R++KNLRVC+DCH+A K+ISK+ REI
Sbjct: 701 DLEEEVKEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREI 760
Query: 626 LVRDAVRFHLFKNGECSCGDFW 647
+VRDA RFH FK+G CSC D+W
Sbjct: 761 IVRDATRFHHFKDGSCSCRDYW 782
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 116/252 (46%), Gaps = 10/252 (3%)
Query: 262 IFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYG 321
+ C + + G+ + + ++++ A SL + S+ N L++ Y
Sbjct: 32 VHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSW----NTLISGYA 87
Query: 322 KCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIG 381
K GN E S RL EM D VSWTA++ GY +FG + I +F KM+S + P + T+
Sbjct: 88 KQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSN 147
Query: 382 VLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFP 441
VLS+C+ ++ GR +VK G+ T ++++ ++ G AK ++M
Sbjct: 148 VLSSCAANQTLDIGRKIHSFVVK-LGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTV- 205
Query: 442 PDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKG-KWDHVSQL 500
+ W L+S G E+ AA ++ + S+ + S Y+ +G + ++
Sbjct: 206 KNISTWNALISLYMQSGQFEL---AASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIF 262
Query: 501 RRTMREKGVRKD 512
+ + E ++ D
Sbjct: 263 SKMLNEPSLKPD 274
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 284/682 (41%), Positives = 420/682 (61%), Gaps = 36/682 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSW +I G+ G ++A+ ++ M+ + + S+ T S +L ++ + +D+
Sbjct: 102 MPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPP-SQFTVSNVLSSCAANQTLDI 160
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR+IH ++K G GS V V + L++MYAK G AK FD + KNI +N +I+ ++
Sbjct: 161 GRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQ 220
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQFTFGS 179
G E + F M D+D +SW +MI+G Q G EA+ +F +M E L D FT S
Sbjct: 221 SGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLAS 280
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK---------------- 223
+L+AC L L GKQIHA+I+R + + + VG+AL+ MY K
Sbjct: 281 ILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSN 340
Query: 224 -----------------SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM 266
++K A +F + ++VV+WTAM+VGY QNG +A+++F M
Sbjct: 341 LNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLM 400
Query: 267 QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
G EP+ +TL +++S ++L LE G Q H ++ G S +V+NAL+ Y K GNI
Sbjct: 401 VNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNI 460
Query: 327 EDSHRLFNEMNVRDE-VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+ R+F+ N + E VSWT+++ A+ G E I+LFE+MLS G+KPD +T +GVLSA
Sbjct: 461 NVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSA 520
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
C+ GLVE+GR Y+ +M + + I P HY CMID+ RAG L+EA FI MP PD I
Sbjct: 521 CTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNI 580
Query: 446 GWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
W +LL+SC+IH N ++ K AAE LL +DP N +Y+ L+++Y++ GKW++ +Q R+ M+
Sbjct: 581 AWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMK 640
Query: 506 EKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLH 565
++GVRK+ G SWI K+ VH F +D P D+IY + ++ ++ K G++PD SVLH
Sbjct: 641 DRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLH 700
Query: 566 DVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREI 625
D+E K ++L +HSEKLAIAFGLL P +R++KNLRVC+DCH+A K+ISK+ REI
Sbjct: 701 DLEEEVKEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREI 760
Query: 626 LVRDAVRFHLFKNGECSCGDFW 647
+VRDA RFH FK+G CSC D+W
Sbjct: 761 IVRDATRFHHFKDGSCSCRDYW 782
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 6/213 (2%)
Query: 262 IFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYG 321
+ C + + G+ + + ++++ A SL + S+ N L++ Y
Sbjct: 32 VHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSW----NTLISGYA 87
Query: 322 KCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIG 381
K GN E S RL EM D VSWTA++ GY +FG + I +F KM+S + P + T+
Sbjct: 88 KQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSN 147
Query: 382 VLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFP 441
VLS+C+ ++ GR +VK G+ T ++++ ++ G AK ++M
Sbjct: 148 VLSSCAANQTLDIGRKIHSFVVK-LGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTV- 205
Query: 442 PDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
+ W L+S G E+ E + + D
Sbjct: 206 KNISTWNALISLYMQSGQFELAASQFEKMPDRD 238
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 270/641 (42%), Positives = 404/641 (63%), Gaps = 34/641 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V W +++G+A +G AV+ + M G+ ++ TF T+L SS G Q+HG
Sbjct: 231 VLWTAMVTGYAQNGDGYKAVEFFRYMHAQGV-ECNQYTFPTILTACSSVLARCFGEQVHG 289
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
I+K GFGS V+V S LVDMYAK G + +AK
Sbjct: 290 FIVKSGFGSNVYVQSALVDMYAKCGDLKNAKN---------------------------- 321
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+ M+D D +SW +++ G +++GLE EA+ LF+ M + +D +TF SVL C
Sbjct: 322 ---MLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCC-- 376
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
++ K +H II+ ++ V +ALVDMY K + A +VF M K+V+SWT++
Sbjct: 377 VVGSINPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSL 436
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ GY QN EE++KIFC+M+ G+ PD F + S++S+CA L LE G Q H + +GL
Sbjct: 437 VTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGL 496
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+V N+LV Y KCG ++D+ +F M V+D ++WTA++ GYA+ GK ++ ++
Sbjct: 497 RWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDA 556
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M+S G +PD +T IG+L ACS AGLV++GR YF+ M K YGI+P +HY CMID+ R+G
Sbjct: 557 MVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSG 616
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+L+EAK +++M PDA W +LLS+CR+H N+E+ + AA +L EL+P N YV+LS+
Sbjct: 617 KLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSN 676
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
+Y++ KW+ V+++R+ M+ KG+ K+PGCSW++ SRV+ F +DD P +IY ++++
Sbjct: 677 MYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDE 736
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
+ ++ + GYVPDMS LHD++ K L +HSEKLA+AFGLL PP PIR+ KNLRV
Sbjct: 737 IILRIKEAGYVPDMSFSLHDMDKEGKEVGLAYHSEKLAVAFGLLAAPPSAPIRIFKNLRV 796
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCH+A KYIS++ R I++RD+ FH F+ GECSCGD+W
Sbjct: 797 CGDCHSAMKYISRVFTRHIILRDSNCFHHFREGECSCGDYW 837
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/484 (31%), Positives = 248/484 (51%), Gaps = 69/484 (14%)
Query: 1 MPFHDGVSWNLLIS-------------------------------GHASHGSVNDAVKVY 29
MP D SWN +IS G+ G +A ++
Sbjct: 91 MPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLF 150
Query: 30 NLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAK 89
M +G S+ T ++L + SS + G IHG ++K GF VFV + LVDMYAK
Sbjct: 151 RSMRLEGW-KASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAK 209
Query: 90 LGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMK--DKDSISWTTMIT 147
V E+ LF+G++ K+ + WT M+T
Sbjct: 210 CKC-------------------------------VSEAEFLFKGLEFDRKNHVLWTAMVT 238
Query: 148 GLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKD 207
G QNG +A++ FR M +G+ +Q+TF ++LTAC +LA G+Q+H FI+++
Sbjct: 239 GYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGS 298
Query: 208 NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQ 267
NV+V SALVDMY KC +K A+++ TM +VVSW +++VG+ ++G EEA+++F NM
Sbjct: 299 NVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMH 358
Query: 268 RNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIE 327
++ DD+T SV++ C + S+ + HG + TG ++ VSNALV Y K G+++
Sbjct: 359 GRNMKIDDYTFPSVLNCCV-VGSINPKS-VHGLIIKTGFENYKLVSNALVDMYAKTGDMD 416
Query: 328 DSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS 387
++ +F +M +D +SWT+LV+GYA+ E++ +F M G+ PD+ + +LSAC+
Sbjct: 417 CAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACA 476
Query: 388 RAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGW 447
L+E G+ +K G+R Y ++ + ++ G L++A + M D I W
Sbjct: 477 ELTLLEFGKQVHLDFIKS-GLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQV-KDVITW 534
Query: 448 ATLL 451
++
Sbjct: 535 TAII 538
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 130/378 (34%), Positives = 217/378 (57%), Gaps = 6/378 (1%)
Query: 77 VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKD 136
++ + L++ +K G + DA++ FD++P+K+ +NTMI+ + G + E+R LF G
Sbjct: 65 IYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSC 124
Query: 137 KDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQI 196
K SI+W+++I+G + G + EA DLFR MRLEG QFT GSVL C L ++ G+ I
Sbjct: 125 KSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMI 184
Query: 197 HAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW--KNVVSWTAMLVGYGQNG 254
H F+++N + NVFV + LVDMY KCK + AE +F+ + + KN V WTAM+ GY QNG
Sbjct: 185 HGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNG 244
Query: 255 CSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSN 314
+AV+ F M G+E + +T +++++C+++ + G Q HG + +G S + V +
Sbjct: 245 DGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQS 304
Query: 315 ALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKP 374
ALV Y KCG+++++ + M D VSW +L+ G+ + G E + LF+ M +K
Sbjct: 305 ALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKI 364
Query: 375 DEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSF 434
D+ T VL+ C + K H ++ + G ++D+ ++ G ++ A +
Sbjct: 365 DDYTFPSVLNCCVVGSINPKSVHG---LIIKTGFENYKLVSNALVDMYAKTGDMDCAYTV 421
Query: 435 INKMPFPPDAIGWATLLS 452
KM D I W +L++
Sbjct: 422 FEKM-LEKDVISWTSLVT 438
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 70/168 (41%), Gaps = 36/168 (21%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D ++W +I G+A +G +++K Y+ M+ G ITF +L S VD
Sbjct: 526 MQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGT-RPDFITFIGLLFACSHAGLVDE 584
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR+ + ++ +Y K G PE Y MI R
Sbjct: 585 GRK----------------------YFQQMNKVYGIKPG----PEH----YACMIDLFGR 614
Query: 121 RGLVEESRRLFRGMKDK-DSISWTTMITGL-MQNGL---EREAIDLFR 163
G ++E+++L M K D+ W ++++ + L ER A +LF
Sbjct: 615 SGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFE 662
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 280/650 (43%), Positives = 416/650 (64%), Gaps = 35/650 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + VSW L++G+ +G A+K+++ M +G+ + TF+ +L ++ V+
Sbjct: 153 MRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGI-KPNPFTFAAVLGGLAADGAVEK 211
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+H ++K G S +FVG+ +V+MY+K ++ DAK
Sbjct: 212 GVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKA---------------------- 249
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+F M++++++SW +MI G + NGL+ EA +LF MRLEG+ + Q F +V
Sbjct: 250 ---------VFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATV 300
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM-AWKN 239
+ C + + KQ+H +I+N ++ + +AL+ Y KC I A +F M +N
Sbjct: 301 IKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQN 360
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRN-GIEPDDFTLGSVISSCAN-LASLEEGTQF 297
VVSWTA++ GY QNG ++ A+ +FC M+R G+EP++FT SV+++CA AS+E+G QF
Sbjct: 361 VVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQF 420
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H S+ +G + + VS+ALVT Y K GNIE ++ +F RD VSW +++SGYA+ G
Sbjct: 421 HSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCG 480
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
+++ +FE+M S L+ D +T IGV+SAC+ AGLV +G+ YF++MVK+Y I P +HY+C
Sbjct: 481 KKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSC 540
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
M+D+ SRAG LE+A INKMPFP A W TLL++CR+H NV++G+ AAE L+ L P +
Sbjct: 541 MVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQD 600
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
A+YVLLS+IYA+ G W +++R+ M K V+K+ G SWI+ K++ F A D S P S
Sbjct: 601 SAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQS 660
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
D+IY +LE+L+ ++ GY PD VLHDVE K +L+ HSE+LAIAFGL+ PPG P
Sbjct: 661 DRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTP 720
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
I++VKNLRVC DCH K ISKI R+I+VRD+ RFH FK G CSCGD+W
Sbjct: 721 IQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 770
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/402 (31%), Positives = 212/402 (52%), Gaps = 36/402 (8%)
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+G+Q+H +K GF V VG+ LVDMY K + D +R FDE
Sbjct: 110 VGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDE----------------- 152
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
M+ K+ +SWT+++ G QNGL +A+ LF +M+LEG+ + FTF +
Sbjct: 153 --------------MRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAA 198
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL A+E+G Q+H +I++ +FVG+++V+MY K + A++VF +M +N
Sbjct: 199 VLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRN 258
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VSW +M+ G+ NG EA ++F M+ G++ +VI CAN+ + Q H
Sbjct: 259 AVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHC 318
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN-VRDEVSWTALVSGYAKFGKAN 358
+ + G + + AL+ Y KC I+D+ +LF M+ V++ VSWTA++SGY + G+ +
Sbjct: 319 QVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTD 378
Query: 359 ETIDLFEKM-LSHGLKPDEVTLIGVLSACSR-AGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
++LF +M G++P+E T VL+AC+ VE+G+ + +K G +
Sbjct: 379 RAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKS-GFSNALCVSS 437
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
++ + ++ G +E A + K D + W +++S HG
Sbjct: 438 ALVTMYAKRGNIESANE-VFKRQVDRDLVSWNSMISGYAQHG 478
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 136/237 (57%)
Query: 151 QNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVF 210
+N +EA++LF +R G D + VL CG L GKQ+H I+ ++V
Sbjct: 69 RNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVS 128
Query: 211 VGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
VG++LVDMY K +S++ E VF M KNVVSWT++L GY QNG +E+A+K+F MQ G
Sbjct: 129 VGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEG 188
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
I+P+ FT +V+ A ++E+G Q H + +GL S I V N++V Y K + D+
Sbjct: 189 IKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAK 248
Query: 331 RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS 387
+F+ M R+ VSW ++++G+ G E +LF +M G+K + V+ C+
Sbjct: 249 AVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCA 305
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 142/293 (48%), Gaps = 14/293 (4%)
Query: 227 YAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCA 286
+++ +F + + +L + +N ++EA+ +F ++R+G D +L V+ C
Sbjct: 44 HSQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCG 103
Query: 287 NLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTA 346
L G Q H + + G + ++V +LV Y K ++ED R+F+EM V++ VSWT+
Sbjct: 104 CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTS 163
Query: 347 LVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY 406
L++GY + G + + LF +M G+KP+ T VL + G VEKG +++K
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKS- 222
Query: 407 GIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWA 466
G+ M+++ S++ + +AK+ + M +A+ W ++++ +G
Sbjct: 223 GLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSME-NRNAVSWNSMIAGFVTNG-------- 273
Query: 467 AESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIK 519
L+L+ + + L + ++ + V +L ++E K C IK
Sbjct: 274 ----LDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIK 322
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 274/645 (42%), Positives = 418/645 (64%), Gaps = 9/645 (1%)
Query: 12 LISGHASHGSVNDAVKV--YNLMLKDGLGNLSRI------TFSTMLIMSSSRRCVDLGRQ 63
L+ +H ++A+ + LK+ L L +I +ST++ R + G++
Sbjct: 32 LVPHLCNHKRFDEAIHILCQQNRLKEALQILHQIDKPSASVYSTLIQSCIKSRLLQQGKK 91
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
+H HI GF +F+ + L++MYAK + D+++ FDE+PE+++ +N +I+G + GL
Sbjct: 92 VHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGL 151
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAMDQFTFGSVLT 182
++E++ LF M ++D+ SWT MI+G +++ EA++LFR M R + ++FT S L
Sbjct: 152 LQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALA 211
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
A + L GK+IH +I+R + V SAL DMY KC SI+ A +F M +++V+
Sbjct: 212 AAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVT 271
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL 302
WTAM+ Y Q+G +E +F ++ R+GI P++FT V+++CAN S E G + HG
Sbjct: 272 WTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMT 331
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
G F ++ALV Y KCGN+ + R+F E D SWT+L++GYA+ G+ +E I
Sbjct: 332 RVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIR 391
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL 422
FE ++ G +PD +T +GVLSAC+ AGLV+KG YF + ++YG+ DHY C+ID+L
Sbjct: 392 YFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLL 451
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYV 482
+R+G+ +EA++ I+KM PD WA+LL CRIHGN+++ + AAE+L E++P NPA+YV
Sbjct: 452 ARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYV 511
Query: 483 LLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYA 542
L++IYA+ G W V+++R+TM ++GV K PG SWI K VH+F D S P S +I
Sbjct: 512 TLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINE 571
Query: 543 ELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVK 602
L KL+++M +EG+VPD + VLHDVE +K + L++HSEKLA+AFG++ P G PI+V K
Sbjct: 572 FLGKLSKRMKEEGFVPDTNFVLHDVEDEQKEQNLSYHSEKLAVAFGIISTPEGTPIKVFK 631
Query: 603 NLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
NLR C DCH A K+ISKIT R+I+VRD+ RFH F++G CSC D+W
Sbjct: 632 NLRTCVDCHTAIKFISKITNRKIIVRDSNRFHFFEDGHCSCRDYW 676
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 181/352 (51%), Gaps = 33/352 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SW +ISG+ H N+A++++ +M + ++ T S+ L +++ C+ +
Sbjct: 162 MPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRI 221
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G++IHG+I++ G S V S L DMY K G I +A+ FD++ +++IV
Sbjct: 222 GKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIV----------- 270
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+WT MI Q+G +E DLF ++ G+ ++FTF V
Sbjct: 271 --------------------TWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGV 310
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC + E GK++H ++ R F SALV MY KC ++ AE VF+ ++
Sbjct: 311 LNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDL 370
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
SWT+++ GY QNG +EA++ F + ++G +PD T V+S+CA+ +++G FH
Sbjct: 371 FSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHS 430
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
GL ++ + G +++ + ++M+++ D+ W +L+ G
Sbjct: 431 IKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGG 482
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 276/647 (42%), Positives = 389/647 (60%), Gaps = 32/647 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN +I+G++ +G +A+ +++ M +G+ S S M + + ++
Sbjct: 181 MPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPV-CAHLLALEQ 239
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIH + ++ G S V V + LV+MYAK G + A + F+ +P +++
Sbjct: 240 GKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVA----------- 288
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SW +I G N EA+ F M++ G+ + T SV
Sbjct: 289 --------------------SWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSV 328
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L ALE+G+QIH + IR+ + N VG+ALV+MY KC ++ A +F M KNV
Sbjct: 329 LPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNV 388
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+W A++ GY Q+G EA+ +F MQ GI+PD F + SV+ +CA+ +LE+G Q HG
Sbjct: 389 VAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGY 448
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ +G S + V LV Y KCGN+ + +LF M +D VSWT ++ Y G +
Sbjct: 449 TIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDA 508
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LF KM G K D + +L+ACS AGLV++G YF+ M +YG+ P +HY C++D
Sbjct: 509 LALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVD 568
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG L+EA I M PDA W LL +CRIH N+E+G+ AA+ L ELDP N
Sbjct: 569 LLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGY 628
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS+IYA +W+ V++LR+ M+EKGV+K PGCS + V F D + P S+QI
Sbjct: 629 YVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQI 688
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
YA LE L +M K GYVP+ + L DVE K +L+ HSEKLAI+FG++ PG+PIR+
Sbjct: 689 YAMLEILYEQMRKAGYVPNTNLALQDVEEEAKENILSSHSEKLAISFGIINTSPGIPIRI 748
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+KNLRVCSDCHNATK+ISKI REI+VRDA RFH KNG CSCGD+W
Sbjct: 749 MKNLRVCSDCHNATKFISKIVGREIIVRDANRFHHVKNGFCSCGDYW 795
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 154/462 (33%), Positives = 249/462 (53%), Gaps = 42/462 (9%)
Query: 4 HDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQ 63
++ V W I G+ +G N A+++Y M + G+ N ++ F +++ S+ + GR+
Sbjct: 83 NNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGI-NPDKLVFLSVIKACGSQSDLQAGRK 141
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
+H I+ GF S V VG+ L MY K G +
Sbjct: 142 VHEDIIARGFESDVIVGTALASMYTKCGSL------------------------------ 171
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
E +R++F M +D +SW +I G QNG EA+ LF EM++ G+ + T SV+
Sbjct: 172 -ENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPV 230
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C LLALE+GKQIH + IR+ + +V V + LV+MY KC ++ A +F M ++V SW
Sbjct: 231 CAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASW 290
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
A++ GY N EA+ F MQ GI+P+ T+ SV+ +CA+L +LE+G Q HG ++
Sbjct: 291 NAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIR 350
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
+G S V NALV Y KCGN+ +++LF M ++ V+W A++SGY++ G +E + L
Sbjct: 351 SGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALAL 410
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY----TCMI 419
F +M + G+KPD ++ VL AC+ +E+G+ + Y IR + T ++
Sbjct: 411 FIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQ-----IHGYTIRSGFESNVVVGTGLV 465
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
DI ++ G + A+ +MP D + W T++ + IHG+ E
Sbjct: 466 DIYAKCGNVNTAQKLFERMP-EQDVVSWTTMILAYGIHGHGE 506
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 275/682 (40%), Positives = 423/682 (62%), Gaps = 36/682 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VSW +I G+ G AV + M+ G+ ++ TF+ +L ++ + +D+
Sbjct: 105 IPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISP-TQFTFTNVLASCAAAQALDV 163
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+++H ++K G V V + L++MYAK G AK FD + K+ +NTMI+ ++
Sbjct: 164 GKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQ 223
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAMDQFTFGS 179
+ + LF M D D +SW ++ITG G + A++ F M + L D+FT GS
Sbjct: 224 FCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGS 283
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE---------- 229
VL+AC +L+ GKQIHA I+R D VG+AL+ MY K +++ A
Sbjct: 284 VLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPS 343
Query: 230 -----------------------SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM 266
++F ++ ++VV+WTAM+VGY QNG +A+ +F M
Sbjct: 344 LNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLM 403
Query: 267 QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
R G +P+++TL +V+S ++LASL+ G Q H ++ +S ++V NAL+T Y + G+I
Sbjct: 404 IREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSI 463
Query: 327 EDSHRLFNEM-NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+D+ ++FN + + RD ++WT+++ A+ G NE I+LFEKML LKPD +T +GVLSA
Sbjct: 464 KDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSA 523
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
C+ GLVE+G+ YF +M + I P HY CMID+L RAG LEEA +FI MP PD +
Sbjct: 524 CTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVV 583
Query: 446 GWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
W +LLSSCR+H V++ K AAE LL +DP N +Y+ L++ ++ GKW+ +++R++M+
Sbjct: 584 AWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMK 643
Query: 506 EKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLH 565
+K V+K+ G SW++ K++VHIF +D P D IY + K+ +++ K G++PD +SVLH
Sbjct: 644 DKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIYCMISKIWKEIKKMGFIPDTNSVLH 703
Query: 566 DVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREI 625
D+E K ++L HHSEKLAIAF L+ P +R++KNLRVC+DCH+A +YIS + +REI
Sbjct: 704 DLEQEVKEQILRHHSEKLAIAFALINTPKHTTVRIMKNLRVCNDCHSAIRYISLLVEREI 763
Query: 626 LVRDAVRFHLFKNGECSCGDFW 647
+VRDA RFH FK+G CSC D+W
Sbjct: 764 IVRDATRFHHFKDGSCSCQDYW 785
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 138/465 (29%), Positives = 227/465 (48%), Gaps = 67/465 (14%)
Query: 60 LGRQIHGHILKFGFGSY-VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
+GR IH I+K G VF+ + L+++Y K G DA R FDE+P K +NT+++
Sbjct: 30 IGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAH 89
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+ G ++ +RR+F + DS+SWTTMI G GL + A+ F M G++ QFTF
Sbjct: 90 AKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFT 149
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
+VL +C AL+ GK++H+F+++ V V ++L++MY KC A+ VF M K
Sbjct: 150 NVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLK 209
Query: 239 -------------------------------NVVSWTAMLVGYGQNGCSEEAVKIFCNM- 266
++VSW +++ GY G A++ F M
Sbjct: 210 DTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFML 269
Query: 267 QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
+ + ++PD FTLGSV+S+CAN SL+ G Q H + + V NAL++ Y K G +
Sbjct: 270 KSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAV 329
Query: 327 EDSHR---------------------------------LFNEMNVRDEVSWTALVSGYAK 353
E +HR +F+ + RD V+WTA++ GYA+
Sbjct: 330 EVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQ 389
Query: 354 FGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
G ++ + LF M+ G KP+ TL VLS S ++ G+ + ++ + +
Sbjct: 390 NGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSV-S 448
Query: 414 HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+I + SR+G +++A+ N + D + W +++ S HG
Sbjct: 449 VGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHG 493
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/641 (41%), Positives = 404/641 (63%), Gaps = 32/641 (4%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW +I + +A K Y M G ++TF ++L ++ + +G+++H
Sbjct: 163 VSWTAMIEAFVAGNQNLEAYKCYETMKLAGC-KPDKVTFVSLLNAFTNPELLQVGQKVHM 221
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
I K G VG+ LV MYAK G I A+ FD+LPEKN+V
Sbjct: 222 EIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVV----------------- 264
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+WT +I G Q G A++L +M+ +A ++ T+ S+L C
Sbjct: 265 --------------TWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTT 310
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
LALE GK++H +II++ + ++V +AL+ MYCKC +K A +F + ++VV+WTAM
Sbjct: 311 PLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAM 370
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ GY Q G +EA+ +F MQ+ GI+PD T S ++SC++ A L+EG H + + G
Sbjct: 371 VTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGY 430
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ + +ALV+ Y KCG+++D+ +FN+M+ R+ V+WTA+++G A+ G+ E ++ FE+
Sbjct: 431 SLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQ 490
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M G+KPD+VT VLSAC+ GLVE+GR +F M +YGI+P+ +HY+C +D+L RAG
Sbjct: 491 MKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAG 550
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
LEEA++ I MPF P W LLS+CRIH +VE G+ AAE++L+LDP + +YV LS+
Sbjct: 551 HLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSN 610
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IYA+ G+++ ++R+ M ++ V K+PG SWI+ +VH+F +D S P + +IYAEL K
Sbjct: 611 IYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGK 670
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
L ++ ++GYVPD VLHDV+ +K++ L HSE+LAI +GL+ PPG PIR+VKNLRV
Sbjct: 671 LTEQIKEQGYVPDTRFVLHDVDEEQKVQTLCSHSERLAITYGLMKTPPGTPIRIVKNLRV 730
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCH A+K+ISK+ REI+ RDA RFH F +G CSCGDFW
Sbjct: 731 CGDCHTASKFISKVVGREIIARDAHRFHHFVDGVCSCGDFW 771
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 132/443 (29%), Positives = 229/443 (51%), Gaps = 40/443 (9%)
Query: 19 HGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVF 78
G + +A+ + N M+ G S + F +L + R ++ GR++H ILK G +
Sbjct: 74 QGRLKEALGILNTMILQGTRVYSDV-FRGLLQECARLRSLEQGREVHAAILKSGIQPNRY 132
Query: 79 VGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKD 138
+ + L+ MYAK G + DA RR+F G++D++
Sbjct: 133 LENTLLSMYAKCGSLTDA-------------------------------RRVFDGIRDRN 161
Query: 139 SISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHA 198
+SWT MI + EA + M+L G D+ TF S+L A L+ G+++H
Sbjct: 162 IVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHM 221
Query: 199 FIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEE 258
I + + VG++LV MY KC I A+ +F + KNVV+WT ++ GY Q G +
Sbjct: 222 EIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDV 281
Query: 259 AVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVT 318
A+++ MQ+ + P+ T S++ C +LE G + H + +G I V NAL+T
Sbjct: 282 ALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALIT 341
Query: 319 FYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVT 378
Y KCG ++++ +LF ++ RD V+WTA+V+GYA+ G +E IDLF +M G+KPD++T
Sbjct: 342 MYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMT 401
Query: 379 LIGVLSACSRAGLVEKGRHYFEIMVKE-YGIRPIHDHY--TCMIDILSRAGRLEEAKSFI 435
L++CS +++G+ + +V Y + D Y + ++ + ++ G +++A+
Sbjct: 402 FTSALTSCSSPAFLQEGKSIHQQLVHAGYSL----DVYLQSALVSMYAKCGSMDDARLVF 457
Query: 436 NKMPFPPDAIGWATLLSSCRIHG 458
N+M + + W +++ C HG
Sbjct: 458 NQMS-ERNVVAWTAMITGCAQHG 479
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 124/415 (29%), Positives = 214/415 (51%), Gaps = 42/415 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + V+W LLI+G+A G V+ A+++ M + + ++IT++++L ++ ++
Sbjct: 258 LPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAP-NKITYTSILQGCTTPLALEH 316
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+++H +I++ G+G ++V + L+ MY K G + +A++ F +LP +++V + M+TG +
Sbjct: 317 GKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQ 376
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G +E+ LFR M+ +G+ D+ TF S
Sbjct: 377 LGFHDEAIDLFRRMQQ-------------------------------QGIKPDKMTFTSA 405
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LT+C L+EGK IH ++ + +V++ SALV MY KC S+ A VF M+ +NV
Sbjct: 406 LTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNV 465
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
V+WTAM+ G Q+G EA++ F M++ GI+PD T SV+S+C ++ +EEG + F
Sbjct: 466 VAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRS 525
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKAN 358
L G+ + + V G+ G++E++ + M + S W AL+S
Sbjct: 526 MYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVE 585
Query: 359 ETIDLFEKMLSHGLKPDE----VTLIGVLSACSRAGLVEKGRHYFEI--MVKEYG 407
E +L L PD+ V L + +A R EK R E +VKE G
Sbjct: 586 RGERAAENVLK--LDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPG 638
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 198/414 (47%), Gaps = 40/414 (9%)
Query: 133 GMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEE 192
G + D+++ + ++ L + G +EA+ + M L+G + F +L C L +LE+
Sbjct: 55 GFRKVDTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQ 114
Query: 193 GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
G+++HA I+++ + N ++ + L+ MY KC S+ A VF + +N+VSWTAM+ +
Sbjct: 115 GREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVA 174
Query: 253 NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITV 312
+ EA K + M+ G +PD T S++++ N L+ G + H GL V
Sbjct: 175 GNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRV 234
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGL 372
+LV Y KCG+I + +F+++ ++ V+WT L++GYA+ G+ + ++L EKM +
Sbjct: 235 GTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEV 294
Query: 373 KPDEVTLIGVLSACSRAGLVEKGRHYFEIMV----------------------------K 404
P+++T +L C+ +E G+ ++ K
Sbjct: 295 APNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARK 354
Query: 405 EYGIRPIHD--HYTCMIDILSRAGRLEEAKSFINKMP---FPPDAIGWATLLSSCRIHGN 459
+G P D +T M+ ++ G +EA +M PD + + + L+SC
Sbjct: 355 LFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAF 414
Query: 460 VEIGKWAAESLLE----LDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
++ GK + L+ LD Y ++ V S+YA G D + M E+ V
Sbjct: 415 LQEGKSIHQQLVHAGYSLDVYLQSALV---SMYAKCGSMDDARLVFNQMSERNV 465
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 272/643 (42%), Positives = 402/643 (62%), Gaps = 32/643 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D ++WN +I G A G+ +A ++Y+ M ++G+ ++IT+ +L + + GR+I
Sbjct: 410 DLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMP-NKITYVILLNACVNPTALHWGREI 468
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H ++K GF + V + L+ MYA+ G I
Sbjct: 469 HSRVVKDGFMFDISVQNALISMYARCGSI------------------------------- 497
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+++R LF M KD ISWT MI GL ++GL EA+ +F++M+ GL ++ T+ S+L AC
Sbjct: 498 KDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNAC 557
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
AL+ G++IH +I + V + LV+MY C S+K A VF M +++V++
Sbjct: 558 SSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYN 617
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
AM+ GY + +EA+K+F +Q G++PD T +++++CAN SLE + H L
Sbjct: 618 AMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKD 677
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G +S ++ NALV+ Y KCG+ D+ +F++M R+ +SW A++ G A+ G+ + + LF
Sbjct: 678 GYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLF 737
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
E+M G+KPD VT + +LSACS AGL+E+GR YF M +++GI P +HY CM+D+L R
Sbjct: 738 ERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGR 797
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG+L+E ++ I MPF + W LL +CRIHGNV + + AAES L+LDP N A YV L
Sbjct: 798 AGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVAL 857
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S +YA+ G WD ++LR+ M ++GV K+PG SWI+ ++H F A+D S P S++IYAEL
Sbjct: 858 SHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAEL 917
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
+KL M EGYVPD SV+HDV+ EK + HHSE+LAIA+GL+ PG PIR+ KNL
Sbjct: 918 DKLTHAMKMEGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTLPGTPIRIFKNL 977
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RVC DCH ATK+I+KI REI+ RD RFH FK+G CSCGD+W
Sbjct: 978 RVCPDCHTATKFITKIVDREIVARDVNRFHHFKDGVCSCGDYW 1020
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 136/452 (30%), Positives = 247/452 (54%), Gaps = 34/452 (7%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW ++I G+A G A +++ M ++G+ +RIT+ +L S + G+ +H
Sbjct: 311 VSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVP-NRITYINVLNAFSGPAALKWGKTVHS 369
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
HIL G S + VG+ LV MYAK G D ++ F++L ++++ +NTMI GL G
Sbjct: 370 HILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGG---- 425
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+W EA +++ +M+ EG+ ++ T+ +L AC
Sbjct: 426 --------------NW-------------EEASEIYHQMQREGMMPNKITYVILLNACVN 458
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
AL G++IH+ ++++ ++ V +AL+ MY +C SIK A +F M K+++SWTAM
Sbjct: 459 PTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAM 518
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ G ++G EA+ +F +MQ+ G++P+ T S++++C++ A+L+ G + H + + GL
Sbjct: 519 IGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGL 578
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ V+N LV Y CG+++D+ ++F+ M RD V++ A++ GYA E + LF++
Sbjct: 579 ATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDR 638
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
+ GLKPD+VT I +L+AC+ +G +E + +++K+ G ++ ++ G
Sbjct: 639 LQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKD-GYLSDTSLGNALVSTYAKCG 697
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+A +KM + I W ++ C HG
Sbjct: 698 SFSDALLVFDKM-MKRNVISWNAIIGGCAQHG 728
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 147/505 (29%), Positives = 251/505 (49%), Gaps = 72/505 (14%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
SWN ++ G+ +G + +A+K+ M + GL L R T +L S ++ GR+IH
Sbjct: 211 SWNAMVVGYVQYGYIEEALKLLREMQQHGLA-LGRATTMRLLSSCKSPSALECGREIHVE 269
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
+K V V + +++MYAK G I+ E+
Sbjct: 270 AMKARLLFDVNVANCILNMYAKCGSIH-------------------------------EA 298
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
R +F M+ K +SWT +I G G A ++F++M+ EG+ ++ T+ +VL A G
Sbjct: 299 REVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGP 358
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
AL+ GK +H+ I+ H+ ++ VG+ALV MY KC S K VF + +++++W M+
Sbjct: 359 AALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMI 418
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
G + G EEA +I+ MQR G+ P+ T ++++C N +L G + H R + G +
Sbjct: 419 GGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFM 478
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
I+V NAL++ Y +CG+I+D+ LFN+M +D +SWTA++ G AK G E + +F+ M
Sbjct: 479 FDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDM 538
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
GLKP+ VT +L+ACS ++ GR + ++ E G+ ++++ S G
Sbjct: 539 QQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVI-EAGLATDAHVANTLVNMYSMCGS 597
Query: 428 LEEAKSFINKMP----------------------------------FPPDAIGWATLLSS 453
+++A+ ++M PD + + +L++
Sbjct: 598 VKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNA 657
Query: 454 CRIHGNVEIGKWAAE--SLLELDPY 476
C G++E WA E SL+ D Y
Sbjct: 658 CANSGSLE---WAKEIHSLVLKDGY 679
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 206/406 (50%), Gaps = 36/406 (8%)
Query: 51 MSSSRRCVDL-----GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPE 105
M +RC+++ GR++H HI++ + + L++MY + G I +A++ +++L
Sbjct: 145 MKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNH 204
Query: 106 KNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM 165
++ SW M+ G +Q G EA+ L REM
Sbjct: 205 TERTVH-----------------------------SWNAMVVGYVQYGYIEEALKLLREM 235
Query: 166 RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI 225
+ GLA+ + T +L++C ALE G++IH ++ +V V + +++MY KC SI
Sbjct: 236 QQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSI 295
Query: 226 KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
A VF M K+VVSWT ++ GY G SE A +IF MQ+ G+ P+ T +V+++
Sbjct: 296 HEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAF 355
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
+ A+L+ G H L G S + V ALV Y KCG+ +D ++F ++ RD ++W
Sbjct: 356 SGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWN 415
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE 405
++ G A+ G E +++ +M G+ P+++T + +L+AC + GR +VK+
Sbjct: 416 TMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKD 475
Query: 406 YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
+ I +I + +R G +++A+ NKM D I W ++
Sbjct: 476 GFMFDISVQ-NALISMYARCGSIKDARLLFNKM-VRKDIISWTAMI 519
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 183/367 (49%), Gaps = 18/367 (4%)
Query: 109 VMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE 168
+M++ L+R R F G + + T G +R A+D+ + ++ +
Sbjct: 77 LMHSQSRVKFLKRWFNSNGIRYFNGRSKANKLHSHTYKDERTITGKDR-AMDVVQYLQQQ 135
Query: 169 GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYA 228
G ++ + +L C + L G+++H II++ + + +AL++MY +C SI+ A
Sbjct: 136 GARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEA 195
Query: 229 ESVFRTM--AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCA 286
V+ + + V SW AM+VGY Q G EEA+K+ MQ++G+ T ++SSC
Sbjct: 196 RQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCK 255
Query: 287 NLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTA 346
+ ++LE G + H ++ L+ + V+N ++ Y KCG+I ++ +F++M + VSWT
Sbjct: 256 SPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTI 315
Query: 347 LVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY 406
++ GYA G + ++F+KM G+ P+ +T I VL+A S ++ G+ V +
Sbjct: 316 IIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGK-----TVHSH 370
Query: 407 GIRPIHDHY----TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
+ H+ T ++ + ++ G ++ + K+ D I W T+ I G E
Sbjct: 371 ILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKL-VNRDLIAWNTM-----IGGLAEG 424
Query: 463 GKWAAES 469
G W S
Sbjct: 425 GNWEEAS 431
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 122/249 (48%), Gaps = 34/249 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D V++N +I G+A+H +A+K+++ + ++GL ++T+ ML ++ ++
Sbjct: 608 MTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGL-KPDKVTYINMLNACANSGSLEW 666
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
++IH +LK G+ S +G+ LV YAK G DA FD++ ++N++ +N +I G
Sbjct: 667 AKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGG--- 723
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
Q+G ++ + LF M++EG+ D TF S+
Sbjct: 724 ----------------------------CAQHGRGQDVLQLFERMKMEGIKPDIVTFVSL 755
Query: 181 LTACGGLLALEEGKQIHAFIIRN-DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK- 238
L+AC LEEG++ + R+ + +VD+ + + E++ +TM ++
Sbjct: 756 LSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQA 815
Query: 239 NVVSWTAML 247
N W A+L
Sbjct: 816 NTRIWGALL 824
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 268/642 (41%), Positives = 404/642 (62%), Gaps = 33/642 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW +I + +A K Y M G ++TF ++L ++ + LG+++H
Sbjct: 114 VSWTAMIEAFVAGNKNLEAFKCYETMKLAGC-KPDKVTFVSLLNAFTNPELLQLGQKVHM 172
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
I++ G VG+ LV MYAK G I A+ FD LPEKN+
Sbjct: 173 EIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNV------------------ 214
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
++WT +I G Q G A++L M+ +A ++ TF S+L C
Sbjct: 215 -------------VTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTT 261
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
ALE GK++H +II++ + ++V ++L+ MYCKC ++ A +F + ++VV+WTAM
Sbjct: 262 PAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAM 321
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ GY Q G +EA+ +F MQ+ GI+PD T SV++SC++ A L+EG + H + + G
Sbjct: 322 VTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGY 381
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY-AKFGKANETIDLFE 365
+ + +ALV+ Y KCG+++D+ +FN+M+ R+ V+WTA+++G A+ G+ E ++ F+
Sbjct: 382 NLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFD 441
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
+M G+KPD+VT VLSAC+ GLVE+GR +F M +YGI+P+ +HY+C +D+L RA
Sbjct: 442 QMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRA 501
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
G LEEA++ I MPF P W LLS+CR+H +VE G+ AAE++L+LDP + +YV LS
Sbjct: 502 GHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALS 561
Query: 486 SIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELE 545
SIYA+ G+++ ++R+ M ++ V K+PG SWI+ +VH+F +D S P S+QIY EL
Sbjct: 562 SIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELG 621
Query: 546 KLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
KL ++ + GYVPD VLHDV+ +K ++L HSE+LAI +GL+ PPG+PIR+VKNLR
Sbjct: 622 KLTEQIKEMGYVPDTRFVLHDVDEEQKERILFSHSERLAITYGLMKTPPGMPIRIVKNLR 681
Query: 606 VCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VC DCH ATK+ISK+ REI+ RDA RFH F +G CSCGDFW
Sbjct: 682 VCGDCHTATKFISKVVGREIIARDAQRFHHFADGVCSCGDFW 723
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 131/438 (29%), Positives = 227/438 (51%), Gaps = 40/438 (9%)
Query: 20 GSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFV 79
G + +A+ + N M+ G S + F +L + R ++ GR++H ILK G ++
Sbjct: 26 GRLKEALGIMNTMILQGTRVYSDV-FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYL 84
Query: 80 GSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDS 139
+ L+ MYAK G + DA+R FD + ++NIV
Sbjct: 85 ENTLLSMYAKCGSLTDARRVFDSIRDRNIV------------------------------ 114
Query: 140 ISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAF 199
SWT MI + EA + M+L G D+ TF S+L A L+ G+++H
Sbjct: 115 -SWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHME 173
Query: 200 IIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEA 259
I+ + VG++LV MY KC I A +F + KNVV+WT ++ GY Q G + A
Sbjct: 174 IVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVA 233
Query: 260 VKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTF 319
+++ MQ+ + P+ T S++ C A+LE G + H + +G + V N+L+T
Sbjct: 234 LELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITM 293
Query: 320 YGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTL 379
Y KCG +E++ +LF+++ RD V+WTA+V+GYA+ G +E I+LF +M G+KPD++T
Sbjct: 294 YCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTF 353
Query: 380 IGVLSACSRAGLVEKGRHYFEIMVKE-YGIRPIHDHY--TCMIDILSRAGRLEEAKSFIN 436
VL++CS +++G+ + +V Y + D Y + ++ + ++ G +++A N
Sbjct: 354 TSVLTSCSSPAFLQEGKRIHQQLVHAGYNL----DVYLQSALVSMYAKCGSMDDASLVFN 409
Query: 437 KMPFPPDAIGWATLLSSC 454
+M + + W +++ C
Sbjct: 410 QMS-ERNVVAWTAIITGC 426
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 124/418 (29%), Positives = 220/418 (52%), Gaps = 47/418 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + V+W LLI+G+A G V+ A+++ M + + ++ITF+++L ++ ++
Sbjct: 209 LPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAP-NKITFASILQGCTTPAALEH 267
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+++H +I++ G+G ++V + L+ MY K G + +A++ F +LP +++V + M+TG +
Sbjct: 268 GKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQ 327
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G +E+ LFR M+ +G+ D+ TF SV
Sbjct: 328 LGFHDEAINLFRRMQQ-------------------------------QGIKPDKMTFTSV 356
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LT+C L+EGK+IH ++ + +V++ SALV MY KC S+ A VF M+ +NV
Sbjct: 357 LTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNV 416
Query: 241 VSWTAMLVG-YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FH 298
V+WTA++ G Q+G EA++ F M++ GI+PD T SV+S+C ++ +EEG + F
Sbjct: 417 VAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFR 476
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN-VRDEVSWTALVSGYAKFGKA 357
L G+ + + V G+ G++E++ + M + W AL+S +
Sbjct: 477 SMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSAC----RV 532
Query: 358 NETIDLFEKMLSHGLK--PDE----VTLIGVLSACSRAGLVEKGRHYFEI--MVKEYG 407
+ ++ E+ + LK PD+ V L + +A R EK R E +VKE G
Sbjct: 533 HSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPG 590
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 198/413 (47%), Gaps = 38/413 (9%)
Query: 133 GMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEE 192
G + ++++ + ++ L + G +EA+ + M L+G + F +L C L +LE+
Sbjct: 6 GFRKVETLANSRDVSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQ 65
Query: 193 GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
G+++HA I+++ + N ++ + L+ MY KC S+ A VF ++ +N+VSWTAM+ +
Sbjct: 66 GREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVA 125
Query: 253 NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITV 312
+ EA K + M+ G +PD T S++++ N L+ G + H + GL V
Sbjct: 126 GNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRV 185
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGL 372
+LV Y KCG+I + +F+ + ++ V+WT L++GYA+ G+ + ++L E M +
Sbjct: 186 GTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEV 245
Query: 373 KPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAK 432
P+++T +L C+ +E G+ +++ R + +I + + G LEEA+
Sbjct: 246 APNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWV-VNSLITMYCKCGGLEEAR 304
Query: 433 SFINKMP----------------------------------FPPDAIGWATLLSSCRIHG 458
+ +P PD + + ++L+SC
Sbjct: 305 KLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPA 364
Query: 459 NVEIGKWAAESLLELDPYNPASYV--LLSSIYASKGKWDHVSQLRRTMREKGV 509
++ GK + L+ YN Y+ L S+YA G D S + M E+ V
Sbjct: 365 FLQEGKRIHQQLVHAG-YNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNV 416
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 273/641 (42%), Positives = 400/641 (62%), Gaps = 32/641 (4%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V WN+++ +++++ +++ M GL ++ T+ ++L +S +DLG QIH
Sbjct: 381 VLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIP-NQFTYPSILRTCTSVGALDLGEQIHT 439
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++K GF V+V S L+DMYAK G ++
Sbjct: 440 QVIKTGFQFNVYVCSVLIDMYAK-------------------------------HGKLDT 468
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+ + R + + D +SWT +I+G Q+ L EA+ F+EM G+ D F S ++AC G
Sbjct: 469 AHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAG 528
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+ AL +G+QIHA + + +++ +G+ALV +Y +C IK A F + K+ +SW +
Sbjct: 529 IQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGL 588
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ G+ Q+G E+A+K+F M R +E FT GS +S+ AN+A++++G Q H + G
Sbjct: 589 ISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGF 648
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
S I VSNAL+TFY KCG+IED+ R F EM +++VSW A+++GY++ G NE ++LFEK
Sbjct: 649 DSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEK 708
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M G P+ VT +GVLSACS GLV KG YFE M KE+G+ P HY C++D++SRAG
Sbjct: 709 MKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAG 768
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
L A+ FI +MP PDA W TLLS+C +H NVE+G++AA+ LLEL+P + A+YVLLS+
Sbjct: 769 FLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSN 828
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
+YA GKWD Q R+ MR +GV+K+PG SWI+ K+ VH F D P +D+IY L +
Sbjct: 829 MYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAE 888
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
LN+K + GY D S+L+DVE +K + HSEKLAI FGLL + +PI V+KNLRV
Sbjct: 889 LNKKAAEIGYFQDRYSLLNDVEQEQKDPTVYIHSEKLAITFGLLSLSDTVPIHVMKNLRV 948
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCH+ K++SKI+ R I+VRDA RFH F+ G CSC D+W
Sbjct: 949 CKDCHSWIKFVSKISNRAIIVRDAYRFHHFEGGICSCKDYW 989
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 133/458 (29%), Positives = 235/458 (51%), Gaps = 34/458 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VS+N LISG A G + A++++ M +D L +T +++L +S +
Sbjct: 274 MQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYL-KPDCVTVASLLSACASNGALCK 332
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+H +++K G S + V L+D+Y I A F +N+V++N M+ +
Sbjct: 333 GEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGK 392
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ ES R+F R+M+++GL +QFT+ S+
Sbjct: 393 LDNLSESFRIF-------------------------------RQMQIKGLIPNQFTYPSI 421
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C + AL+ G+QIH +I+ + NV+V S L+DMY K + A + RT+ +V
Sbjct: 422 LRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDV 481
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWTA++ GY Q+ EA+K F M GI+ D+ S IS+CA + +L +G Q H +
Sbjct: 482 VSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQ 541
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
S V+G +++ NALV+ Y +CG I++++ F +++ +D +SW L+SG+A+ G +
Sbjct: 542 SYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDA 601
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ +F +M L+ T +SA + +++G+ +++K G + +I
Sbjct: 602 LKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKR-GFDSDIEVSNALIT 660
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
++ G +E+A+ +MP D + W +++ HG
Sbjct: 661 FYAKCGSIEDARREFCEMPEKND-VSWNAMITGYSQHG 697
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 131/450 (29%), Positives = 230/450 (51%), Gaps = 38/450 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW +ISG + +G +A+ ++ M G+ + FS++L + + D+G Q+
Sbjct: 177 DSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYV-FSSVLSGCTKIKLFDVGEQL 235
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H + K+G +V + LV +Y+++ N V
Sbjct: 236 HALVFKYGSSLETYVCNALVTLYSRM---------------PNFV--------------- 265
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ ++F M+ KD +S+ ++I+GL Q G A++LF +M+ + L D T S+L+AC
Sbjct: 266 -SAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSAC 324
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
AL +G+Q+H+++I+ ++ V AL+D+Y C IK A +F T +NVV W
Sbjct: 325 ASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWN 384
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
MLV +G+ E+ +IF MQ G+ P+ FT S++ +C ++ +L+ G Q H + + T
Sbjct: 385 VMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKT 444
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G + V + L+ Y K G ++ +H + + D VSWTAL+SGYA+ E + F
Sbjct: 445 GFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHF 504
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY--GIRPIHDHYTCMIDIL 422
++ML+ G++ D + +SAC+ + +GR +I + Y G ++ +
Sbjct: 505 KEMLNRGIQSDNIGFSSAISACAGIQALNQGR---QIHAQSYVSGYSEDLSIGNALVSLY 561
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+R GR++EA K+ D+I W L+S
Sbjct: 562 ARCGRIKEAYLEFEKID-AKDSISWNGLIS 590
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 129/460 (28%), Positives = 225/460 (48%), Gaps = 39/460 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRC-VD 59
MP SW+ +ISG N + +++ M+++ + + I+F+++L S R +
Sbjct: 71 MPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSP-TEISFASVLRACSGHRIGIR 129
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
QIH I+ G + +PL+ +YAK GLI A
Sbjct: 130 YAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISA----------------------- 166
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
R++F + KDS+SW MI+G QNG E EAI LF EM G+ + F S
Sbjct: 167 --------RKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSS 218
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL+ C + + G+Q+HA + + +V +ALV +Y + + AE VF M K+
Sbjct: 219 VLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKD 278
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VS+ +++ G Q G S+ A+++F M+R+ ++PD T+ S++S+CA+ +L +G Q H
Sbjct: 279 EVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHS 338
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ G+ S + V AL+ Y C +I+ +H +F + V W ++ + K +E
Sbjct: 339 YVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSE 398
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC-- 417
+ +F +M GL P++ T +L C+ G ++ G ++K G + + Y C
Sbjct: 399 SFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKT-GFQ--FNVYVCSV 455
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIH 457
+ID+ ++ G+L+ A + + D + W L+S H
Sbjct: 456 LIDMYAKHGKLDTAHVILRTLT-EDDVVSWTALISGYAQH 494
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 132/483 (27%), Positives = 220/483 (45%), Gaps = 66/483 (13%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+++HG ILK GFG+ + + LVD+Y LG + + F+++P +++
Sbjct: 30 KKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVR------------ 77
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
SW +I+G M+ + +DLF M E ++ + +F SVL
Sbjct: 78 -------------------SWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVL 118
Query: 182 TACGG-LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
AC G + + +QIHA II + + + + L+ +Y K I A VF + K+
Sbjct: 119 RACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDS 178
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW AM+ G+ QNG EEA+ +FC M GI P + SV+S C + + G Q H
Sbjct: 179 VSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHAL 238
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
G V NALVT Y + N + ++F++M +DEVS+ +L+SG A+ G ++
Sbjct: 239 VFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGA 298
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE--------------- 405
++LF KM LKPD VT+ +LSAC+ G + KG ++K
Sbjct: 299 LELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDL 358
Query: 406 ----YGIRPIHDHY-----------TCMIDILSRAGRLEEAKSFINKMPFP---PDAIGW 447
I+ H+ + M+ + L E+ +M P+ +
Sbjct: 359 YVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTY 418
Query: 448 ATLLSSCRIHGNVEIGKWAAESLLELD-PYNPASYVLLSSIYASKGKWDHVSQLRRTMRE 506
++L +C G +++G+ +++ +N +L +YA GK D + RT+ E
Sbjct: 419 PSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTE 478
Query: 507 KGV 509
V
Sbjct: 479 DDV 481
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 159/355 (44%), Gaps = 14/355 (3%)
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M G+ + T+ +L C +L E K++H I++ + + + LVD+Y
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ VF M ++V SW ++ G+ + S + +F M + P + + SV+ +
Sbjct: 61 LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120
Query: 285 CA-NLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
C+ + + Q H R + GL+ +SN L+ Y K G I + ++F+ + +D VS
Sbjct: 121 CSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVS 180
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
W A++SG+++ G E I LF +M + G+ P VLS C++ L + G ++
Sbjct: 181 WVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVF 240
Query: 404 KEYGIRPIHDHYTC--MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIH---- 457
K YG + Y C ++ + SR A+ +KM D + + +L+S
Sbjct: 241 K-YGSSL--ETYVCNALVTLYSRMPNFVSAEKVFSKMQ-SKDEVSFNSLISGLAQQGFSD 296
Query: 458 GNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKD 512
G +E+ L+ D AS L S AS G QL + + G+ D
Sbjct: 297 GALELFTKMKRDYLKPDCVTVAS---LLSACASNGALCKGEQLHSYVIKAGISSD 348
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 15/125 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSWN +I+G++ HG N+AV ++ M + G + +TF +L S V
Sbjct: 678 MPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVG-EMPNHVTFVGVLSACSHVGLVTK 736
Query: 61 G-------RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYN 112
G + HG + K + V VD+ ++ G + A++ +E+P E + ++
Sbjct: 737 GLGYFESMSKEHGLVPKPAHYACV------VDLISRAGFLSRARKFIEEMPIEPDATIWR 790
Query: 113 TMITG 117
T+++
Sbjct: 791 TLLSA 795
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 543 bits (1399), Expect = e-151, Method: Compositional matrix adjust.
Identities = 264/682 (38%), Positives = 415/682 (60%), Gaps = 36/682 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VSW +I G+ G DA+K++ M+KD + ++ T + +L ++ +
Sbjct: 67 IPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLP-TQFTLTNVLASCAATGSRGI 125
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+++H ++K G + V V + L++MYAK G + AK FD + +N +N MI+ +
Sbjct: 126 GKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMN 185
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE-MRLEGLAMDQFTFGS 179
G V+ + F + ++D +SW +MI G Q+G + EA+ F ++ L D+F+ S
Sbjct: 186 CGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLAS 245
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY------------ 227
L+AC L L GKQIH +I+R + VG+AL+ MY K ++
Sbjct: 246 ALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISD 305
Query: 228 ---------------------AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM 266
A +F ++ +VV+WTAM+VGY QNG + +A+++F M
Sbjct: 306 LDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTM 365
Query: 267 QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
G P+ FTL +++S+ +++ SL G Q H ++ +G +V NAL T Y K G+I
Sbjct: 366 VSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSI 425
Query: 327 EDSHRLFNEMNV-RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+ ++FN + RD VSWT+++ A+ G E I+LFE+ML+ G+KPD +T +GVLSA
Sbjct: 426 NGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSA 485
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
C+ GLVE+GR YF++M + I P HY CM+D+ RAG L+EA F+ MP PD I
Sbjct: 486 CTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVI 545
Query: 446 GWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
W +LLSSC+++ NV++ K AAE LL ++P N +Y L+++Y+S GKWD +++R+ M+
Sbjct: 546 AWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMK 605
Query: 506 EKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLH 565
+GV+K+ G SW++ +++ H+F +D P D+IY ++K+ +++ K G+ PD SVLH
Sbjct: 606 ARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMGFAPDTESVLH 665
Query: 566 DVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREI 625
D+E+ K ++L +HSEKLAIAFG++ P +R++KNLRVC+DCHNA K+ISK+ REI
Sbjct: 666 DLEVEVKDQILRYHSEKLAIAFGIISTPENTTLRIMKNLRVCNDCHNAIKFISKLVDREI 725
Query: 626 LVRDAVRFHLFKNGECSCGDFW 647
+VRDA RFH FK+G CSC D+W
Sbjct: 726 IVRDATRFHHFKDGSCSCKDYW 747
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 223/458 (48%), Gaps = 70/458 (15%)
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
++K G V++ + L+++YAK G DA F+E+P K +NT+++G ++G +E++
Sbjct: 1 MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
++F + +DS+SWTT+I G Q G +AI +F +M + + QFT +VL +C
Sbjct: 61 HQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAAT 120
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN-------- 239
+ GK++H+F+++ V V ++L++MY K +K A+ VF M +N
Sbjct: 121 GSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMI 180
Query: 240 -----------------------VVSWTAMLVGYGQNGCSEEAVKIFCNMQRN-GIEPDD 275
+VSW +M+ G Q+G EA++ F ++ ++ ++PD
Sbjct: 181 SLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDR 240
Query: 276 FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHR---- 331
F+L S +S+CANL L G Q HG + T + V NAL++ Y K G +E + R
Sbjct: 241 FSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQ 300
Query: 332 -----------------------------LFNEMNVRDEVSWTALVSGYAKFGKANETID 362
+FN + D V+WTA++ GY + G N+ I+
Sbjct: 301 SGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIE 360
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR--HYFEIMVKEYGIRPIHDHYTCMID 420
+F+ M+S G +P+ TL +LSA S + G+ H I E + + T M
Sbjct: 361 VFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTM-- 418
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
++AG + A+ N + D + W +++ + HG
Sbjct: 419 -YAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHG 455
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 543 bits (1399), Expect = e-151, Method: Compositional matrix adjust.
Identities = 265/605 (43%), Positives = 395/605 (65%), Gaps = 1/605 (0%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
+ST++ R ++LGR++H H F VF+ + L+DMYAK G + DA+ FDE+
Sbjct: 89 VYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEM 148
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
+++ +NTMI G + G +E++R+LF M +D+ SW I+G + + REA++LFR
Sbjct: 149 GHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFR 208
Query: 164 EM-RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC 222
M R E + ++FT S L A + L GK+IH ++IR + + V SAL+D+Y KC
Sbjct: 209 VMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKC 268
Query: 223 KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
S+ A +F M ++VVSWT M+ ++G EE +F ++ ++G+ P+++T V+
Sbjct: 269 GSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVL 328
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
++CA+ A+ G + HG + G +ALV Y KCGN + R+FNEM+ D V
Sbjct: 329 NACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLV 388
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
SWT+L+ GYA+ G+ +E + FE +L G KPD+VT +GVLSAC+ AGLV+KG YF +
Sbjct: 389 SWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSI 448
Query: 403 VKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
+++G+ DHY C+ID+L+R+GR +EA++ I+ MP PD WA+LL CRIHGN+E+
Sbjct: 449 KEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLEL 508
Query: 463 GKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKS 522
K AA++L E++P NPA+Y+ L++IYA+ G W V+ +R+ M G+ K PG SWI+ K
Sbjct: 509 AKRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPGKSWIEIKR 568
Query: 523 RVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEK 582
+VH+F D S P + I+ L +L++K+ +EGYVPD + VLHDVE +K + L +HSEK
Sbjct: 569 QVHVFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEEEQKEQNLVYHSEK 628
Query: 583 LAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECS 642
LA+ FG++ PPG PI+V KNLR C DCH A KYISKI QR+I VRD+ RFH F++G CS
Sbjct: 629 LAVVFGIISTPPGTPIKVFKNLRTCVDCHTAIKYISKIVQRKITVRDSNRFHCFEDGSCS 688
Query: 643 CGDFW 647
C D+W
Sbjct: 689 CKDYW 693
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 180/352 (51%), Gaps = 33/352 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SWN ISG+ +H +A++++ +M + + ++ T S+ L S++ C+ L
Sbjct: 179 MPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRL 238
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G++IHG++++ V S L+D+Y K G + +A+ FD++ ++++V + TMI
Sbjct: 239 GKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMI----- 293
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
R F ++G E LFR++ G+ +++TF V
Sbjct: 294 -------HRCF-------------------EDGRREEGFLLFRDLMQSGVRPNEYTFAGV 327
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC A GK++H +++ + F SALV MY KC + + A VF M ++
Sbjct: 328 LNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDL 387
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
VSWT+++VGY QNG +EA+ F + ++G +PD T V+S+C + +++G + FH
Sbjct: 388 VSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHS 447
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
GL+ ++ + G +++ + + M V+ D+ W +L+ G
Sbjct: 448 IKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGG 499
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 108/249 (43%), Gaps = 44/249 (17%)
Query: 257 EEAVKIFCNMQR--NGIE--------PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
EEAV + C +R +E P ++I++C +LE G + H + +
Sbjct: 59 EEAVDVLCQQKRVKEAVELLHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNF 118
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ + +SN L+ Y KCG++ D+ LF+EM RD SW ++ GYAK G+ + LF++
Sbjct: 119 VPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDE 178
Query: 367 M---------------LSHGLKPDEVTLIGVL-----SACSRAGLVEKGRHYFEIMVKEY 406
M ++H + + L V+ S+ ++ L I
Sbjct: 179 MPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRL 238
Query: 407 GIRPIHDH------------YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
G + IH + ++ ++D+ + G L+EA+ ++M D + W T++ C
Sbjct: 239 G-KEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMK-DRDVVSWTTMIHRC 296
Query: 455 RIHGNVEIG 463
G E G
Sbjct: 297 FEDGRREEG 305
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 273/647 (42%), Positives = 409/647 (63%), Gaps = 18/647 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN ++SG A +G V +A K+++ ML + I+++ +L ++
Sbjct: 148 MPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVK-----NEISWNGLLSAYVQNGRIED 202
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
R++ + + S+ + L+ Y + + DA+ FD +P ++ + +N MITG +
Sbjct: 203 ARRLFDSKMDWEIVSW----NCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQ 258
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL+ E+RRLF + +D +WT M++G +QNG+ EA +F EM + ++ ++ ++
Sbjct: 259 NGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEK----NEVSWNAM 314
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ +E+ +++ + N + +V Y +C +I A+ +F M ++
Sbjct: 315 IAGYVQSQQIEKARELFDQM----PSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDC 370
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SW AM+ GY Q+G SEEA+ +F M+R+G + L +SSCA +A+LE G Q HGR
Sbjct: 371 ISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGR 430
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ G + NAL+ YGKCG+IE++ +F ++ +D VSW +++GYA+ G E
Sbjct: 431 LVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEA 490
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LFE M +KPD+VTL+GVLSACS GLV+KG YF M + YGI HYTCMID
Sbjct: 491 LALFESM-KMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMID 549
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAGRL+EA + + MPF PDA W LL + RIHG+ E+G+ AAE + E++P N
Sbjct: 550 LLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGM 609
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS++YA+ G+W V ++R MR+KGV+K PG SW++ +++ HIF+ D S P +++I
Sbjct: 610 YVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERI 669
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
YA LE+L+ ++ K+G+V VLHDVE EK ML +HSEKLA+AFG+L IPPG PIRV
Sbjct: 670 YAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRV 729
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+KNLRVC DCHNA K+ISKITQR+I+VRD+ RFH F G CSCGD+W
Sbjct: 730 IKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 219/455 (48%), Gaps = 29/455 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V WN IS + G A+ V+N G+ S +T++ M+ S D R++
Sbjct: 59 DIVKWNRKISAYMRKGQCESALSVFN-----GMRRRSTVTYNAMISGYLSNNKFDCARKV 113
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
+ S+ + ++ Y K G + A+ F+++PEK++V +N M++G + G V
Sbjct: 114 FEKMPDRDLISW----NVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFV 169
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
EE+R++F M K+ ISW +++ +QNG +A LF MD + S
Sbjct: 170 EEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDS------KMD-WEIVSWNCLM 222
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
GG + + + R +D + + ++ Y + + A +F + ++V +WT
Sbjct: 223 GGYVRKKRLDDARSLFDRMPVRDKI-SWNIMITGYAQNGLLSEARRLFEELPIRDVFAWT 281
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
AM+ G+ QNG +EA +IF M E ++ + ++I+ +E+ R L
Sbjct: 282 AMVSGFVQNGMLDEATRIFEEMP----EKNEVSWNAMIAGYVQSQQIEK-----ARELFD 332
Query: 305 GLISFITVS-NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
+ S T S N +VT Y +CGNI+ + LF+EM RD +SW A++SGYA+ G++ E + L
Sbjct: 333 QMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHL 392
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F KM G + L LS+C+ +E G+ +VK G + + ++ +
Sbjct: 393 FIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKA-GFQTGYIAGNALLAMYG 451
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ G +EEA + D + W T+++ HG
Sbjct: 452 KCGSIEEAFDVFEDIT-EKDIVSWNTMIAGYARHG 485
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 172/367 (46%), Gaps = 26/367 (7%)
Query: 95 DAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGL 154
++K + + +IV +N I+ +R+G E + +F GM+ + ++++ MI+G + N
Sbjct: 47 ESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNK 106
Query: 155 EREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSA 214
A +F +M D ++ +L+ G + A + KD V +A
Sbjct: 107 FDCARKVFEKMP----DRDLISWNVMLS---GYVKNGNLSAARALFNQMPEKD-VVSWNA 158
Query: 215 LVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD 274
++ + + ++ A +F M KN +SW +L Y QNG E+A ++F + I
Sbjct: 159 MLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSW 218
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN 334
+ +G + L++ R V IS+ N ++T Y + G + ++ RLF
Sbjct: 219 NCLMGGYVRK----KRLDDARSLFDRMPVRDKISW----NIMITGYAQNGLLSEARRLFE 270
Query: 335 EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEK 394
E+ +RD +WTA+VSG+ + G +E +FE+M + +EV+ +++ ++ +EK
Sbjct: 271 ELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEM----PEKNEVSWNAMIAGYVQSQQIEK 326
Query: 395 GRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
R F+ M + M+ ++ G +++AK ++MP D I WA ++S
Sbjct: 327 ARELFDQMPSRN-----TSSWNTMVTGYAQCGNIDQAKILFDEMP-QRDCISWAAMISGY 380
Query: 455 RIHGNVE 461
G E
Sbjct: 381 AQSGQSE 387
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 271/682 (39%), Positives = 423/682 (62%), Gaps = 36/682 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VSW +I G+ + G + A+++ M+++G+ S+ T + +L ++ RC++
Sbjct: 106 LPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGI-EPSQFTLTNVLASVAATRCLET 164
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+++H I+K G V V + L++MYAK G AK FD + K+I +N MI ++
Sbjct: 165 GKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQ 224
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAMDQFTFGS 179
G ++ + F M ++D ++W +MI+G Q G + A+D+F +M R L+ D+FT S
Sbjct: 225 VGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLAS 284
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYA----------- 228
VL+AC L L G+QIH+ I+ + V +AL+ MY +C ++ A
Sbjct: 285 VLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKD 344
Query: 229 ----------------------ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM 266
+++F ++ ++VV+WTAM+VGY Q+G EA+ +F +M
Sbjct: 345 LKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSM 404
Query: 267 QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
P+ +TL +++S ++LASL G Q HG ++ +G I ++VSNAL+T Y K G+I
Sbjct: 405 VGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSI 464
Query: 327 EDSHRLFNEMNV-RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+ R F+ + RD VSWT+++ A+ G A E ++LFE ML GL+PD +T +GV SA
Sbjct: 465 TSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSA 524
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
C+ AGLV +GR YF++M I P HY CM+D+ RAG L+EA+ FI KMP PD +
Sbjct: 525 CTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVV 584
Query: 446 GWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
W +LLS+CR++ N+++GK AAE LL L+P N +Y L+++Y++ GKW+ +++R++M+
Sbjct: 585 TWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMK 644
Query: 506 EKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLH 565
+ V+K+ G SWI+ K +VH F +D P ++IY ++K+ ++ K GYVPD +SVLH
Sbjct: 645 DGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTASVLH 704
Query: 566 DVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREI 625
D+E K ++L HHSEKLAIAFGL+ P +R++KNLRVC+DCH A K+ISK+ REI
Sbjct: 705 DLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREI 764
Query: 626 LVRDAVRFHLFKNGECSCGDFW 647
+VRD RFH FK+G CSC D+W
Sbjct: 765 IVRDTTRFHHFKDGFCSCRDYW 786
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 135/473 (28%), Positives = 222/473 (46%), Gaps = 66/473 (13%)
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
+H ++K G V++ + L+++Y+K G A++ FDE+P + +NT+++ +RG
Sbjct: 36 VHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGD 95
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
++ S F + +DS+SWTTMI G G +AI + EM EG+ QFT +VL +
Sbjct: 96 MDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLAS 155
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV------------ 231
LE GK++H+FI++ + NV V ++L++MY KC A+ V
Sbjct: 156 VAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSW 215
Query: 232 -------------------FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-I 271
F MA +++V+W +M+ GY Q G A+ +F M R+ +
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSML 275
Query: 272 EPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHR 331
PD FTL SV+S+CANL L G Q H + TG V NAL++ Y +CG +E + R
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 332 L---------------------------------FNEMNVRDEVSWTALVSGYAKFGKAN 358
L F+ + RD V+WTA++ GY + G
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYG 395
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
E I+LF M+ +P+ TL +LS S + G+ VK I + +
Sbjct: 396 EAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSV-SVSNAL 454
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL 471
I + ++AG + A + + D + W +++ + HG+ E E++L
Sbjct: 455 ITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETML 507
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 3/182 (1%)
Query: 294 GTQFHGRSLVTGLISFITVS-NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
G H R L + S N +++ Y K G+++ S F+ + RD VSWT ++ GY
Sbjct: 63 GYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYK 122
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
G+ ++ I + +M+ G++P + TL VL++ + +E G+ +VK G+R
Sbjct: 123 NIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVK-LGLRGNV 181
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLE 472
++++ ++ G AK ++M D W +++ G +++ E + E
Sbjct: 182 SVSNSLLNMYAKCGDPMMAKVVFDRM-VVKDISSWNAMIALHMQVGQMDLAMAQFEQMAE 240
Query: 473 LD 474
D
Sbjct: 241 RD 242
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 284/656 (43%), Positives = 399/656 (60%), Gaps = 22/656 (3%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P SW + +A+ Y M G F +L S + + G
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSG-ARPDNFAFPAVLKAVSGLQDLKTG 111
Query: 62 RQIHGHILKFGFGSY-VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
QIH +KFG+GS V V + LV+MY K G I D N ++ +
Sbjct: 112 EQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGD-----------KTFTNNALMAMYAK 160
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G V++S+ LF D+D +SW TMI+ Q+ EA+ FR M LEG+ +D T SV
Sbjct: 161 LGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASV 220
Query: 181 LTACGGLLALEEGKQIHAFIIRN-DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
L AC L L+ GK+IHA+++RN D +N FVGSALVDMYC C+ ++ VF + +
Sbjct: 221 LPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRR 280
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQR-NGIEPDDFTLGSVISSCA-NLASLEEGTQF 297
+ W AM+ GY +NG E+A+ +F M + G+ P+ T+ SV+ +C +LA++ +G +
Sbjct: 281 IELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEI 340
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H ++ L S ITV +ALV Y KCG + S R+FNEM ++ ++W L+ GK
Sbjct: 341 HAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKG 400
Query: 358 NETIDLFEKMLSHG-----LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
E ++LF+ M++ KP+EVT I V +ACS +GL+ +G + F M ++G+ P
Sbjct: 401 EEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTS 460
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIG-WATLLSSCRIHGNVEIGKWAAESLL 471
DHY C++D+L RAG+LEEA +N MP D +G W++LL +CRIH NVE+G+ AA++LL
Sbjct: 461 DHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLL 520
Query: 472 ELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADD 531
L+P + YVLLS+IY+S G W+ ++R+ MR+ GV+K+PGCSWI+++ VH F A D
Sbjct: 521 HLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGD 580
Query: 532 WSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLF 591
S P S+Q++ LE L+ KM KEGYVPD S VLH+V+ EK +L HSEKLAIAFG+L
Sbjct: 581 VSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILN 640
Query: 592 IPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
PPG IRV KNLRVC+DCH ATK+ISKI +REI+VRD RFH FK G CSCGD+W
Sbjct: 641 TPPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 696
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 275/682 (40%), Positives = 426/682 (62%), Gaps = 36/682 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VSW +I G+ + G + A++V M+K+G+ ++ T + +L ++ RC++
Sbjct: 106 LPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGI-EPTQFTLTNVLASVAATRCMET 164
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+++H I+K G V V + L++MYAK G AK FD + ++I +N MI ++
Sbjct: 165 GKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQ 224
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAMDQFTFGS 179
G ++ + F M ++D ++W +MI+G Q G + A+D+F +M R L+ D+FT S
Sbjct: 225 VGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLAS 284
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIK------------- 226
VL+AC L L GKQIH+ I+ + V +AL+ MY +C ++
Sbjct: 285 VLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKD 344
Query: 227 --------------------YAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM 266
A+++F ++ ++VV+WTAM+VGY Q+G EA+ +F +M
Sbjct: 345 LKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM 404
Query: 267 QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
G P+ +TL +++S ++LASL G Q HG ++ +G I ++VSNAL+T Y K GNI
Sbjct: 405 VGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNI 464
Query: 327 EDSHRLFNEMNV-RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+ R F+ + RD VSWT+++ A+ G A E ++LFE ML GL+PD +T +GV SA
Sbjct: 465 TSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSA 524
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
C+ AGLV +GR YF++M I P HY CM+D+ RAG L+EA+ FI KMP PD +
Sbjct: 525 CTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVV 584
Query: 446 GWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
W +LLS+CR+H N+++GK AAE LL L+P N +Y L+++Y++ GKW+ +++R++M+
Sbjct: 585 TWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMK 644
Query: 506 EKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLH 565
+ V+K+ G SWI+ K +VH+F +D + P ++IY ++K+ ++ K GYVPD +SVLH
Sbjct: 645 DGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLH 704
Query: 566 DVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREI 625
D+E K ++L HHSEKLAIAFGL+ P +R++KNLRVC+DCH A K+ISK+ REI
Sbjct: 705 DLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREI 764
Query: 626 LVRDAVRFHLFKNGECSCGDFW 647
+VRD RFH FK+G CSC D+W
Sbjct: 765 IVRDTTRFHHFKDGFCSCRDYW 786
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 133/473 (28%), Positives = 222/473 (46%), Gaps = 66/473 (13%)
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
+H ++K G V++ + L+++Y+K G A++ FDE+P + +NT+++ +RG
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
++ + F + +DS+SWTTMI G G +AI + +M EG+ QFT +VL +
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV------------ 231
+E GK++H+FI++ + NV V ++L++MY KC A+ V
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 232 -------------------FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-I 271
F MA +++V+W +M+ G+ Q G A+ IF M R+ +
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 272 EPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHR 331
PD FTL SV+S+CANL L G Q H + TG V NAL++ Y +CG +E + R
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 332 L---------------------------------FNEMNVRDEVSWTALVSGYAKFGKAN 358
L F + RD V+WTA++ GY + G
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYG 395
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
E I+LF M+ G +P+ TL +LS S + G+ VK I + +
Sbjct: 396 EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSV-SVSNAL 454
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL 471
I + ++AG + A + + D + W +++ + HG+ E E++L
Sbjct: 455 ITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETML 507
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 272/647 (42%), Positives = 408/647 (63%), Gaps = 18/647 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN ++SG A +G V +A K+++ ML + I+++ +L ++
Sbjct: 148 MPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVK-----NEISWNGLLSAYVQNGRIED 202
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
R++ + + S+ + L+ Y + + DA+ FD +P ++ + +N MITG +
Sbjct: 203 ARRLFDSKMDWEIVSW----NCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQ 258
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL+ E+RRLF + +D +WT M++G +QNG+ EA +F EM + ++ ++ ++
Sbjct: 259 NGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEK----NEVSWNAM 314
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ +E+ +++ + N + +V Y +C +I A+ +F M ++
Sbjct: 315 IAGYVQSQQIEKARELFDQM----PSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDC 370
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SW AM+ GY Q+G SEEA+ +F M+R+G + L +SSCA +A+LE G Q HGR
Sbjct: 371 ISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGR 430
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ G + NAL+ YGKCG+IE++ +F ++ +D VSW +++GYA+ G E
Sbjct: 431 LVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEA 490
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LFE M +KPD+VTL+GVLSACS G V+KG YF M + YGI HYTCMID
Sbjct: 491 LALFESM-KMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMID 549
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAGRL+EA + + MPF PDA W LL + RIHG+ E+G+ AAE + E++P N
Sbjct: 550 LLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGM 609
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS++YA+ G+W V ++R MR+KGV+K PG SW++ +++ HIF+ D S P +++I
Sbjct: 610 YVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERI 669
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
YA LE+L+ ++ K+G+V VLHDVE EK ML +HSEKLA+AFG+L IPPG PIRV
Sbjct: 670 YAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRV 729
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+KNLRVC DCHNA K+ISKITQR+I+VRD+ RFH F G CSCGD+W
Sbjct: 730 IKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 219/455 (48%), Gaps = 29/455 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V WN IS + G A+ V+N G+ S +T++ M+ S D R++
Sbjct: 59 DIVKWNRKISAYMRKGQCESALSVFN-----GMRRRSTVTYNAMISGYLSNNKFDCARKV 113
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
+ S+ + ++ Y K G + A+ F+++PEK++V +N M++G + G V
Sbjct: 114 FEKMPDRDLISW----NVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFV 169
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
EE+R++F M K+ ISW +++ +QNG +A LF MD + S
Sbjct: 170 EEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDS------KMD-WEIVSWNCLM 222
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
GG + + + R +D + + ++ Y + + A +F + ++V +WT
Sbjct: 223 GGYVRKKRLDDARSLFDRMPVRDKI-SWNIMITGYAQNGLLSEARRLFEELPIRDVFAWT 281
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
AM+ G+ QNG +EA +IF M E ++ + ++I+ +E+ R L
Sbjct: 282 AMVSGFVQNGMLDEATRIFEEMP----EKNEVSWNAMIAGYVQSQQIEK-----ARELFD 332
Query: 305 GLISFITVS-NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
+ S T S N +VT Y +CGNI+ + LF+EM RD +SW A++SGYA+ G++ E + L
Sbjct: 333 QMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHL 392
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F KM G + L LS+C+ +E G+ +VK G + + ++ +
Sbjct: 393 FIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKA-GFQTGYIAGNALLAMYG 451
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ G +EEA + D + W T+++ HG
Sbjct: 452 KCGSIEEAFDVFEDIT-EKDIVSWNTMIAGYARHG 485
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 172/367 (46%), Gaps = 26/367 (7%)
Query: 95 DAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGL 154
++K + + +IV +N I+ +R+G E + +F GM+ + ++++ MI+G + N
Sbjct: 47 ESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNK 106
Query: 155 EREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSA 214
A +F +M D ++ +L+ G + A + KD V +A
Sbjct: 107 FDCARKVFEKMP----DRDLISWNVMLS---GYVKNGNLSAARALFNQMPEKD-VVSWNA 158
Query: 215 LVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD 274
++ + + ++ A +F M KN +SW +L Y QNG E+A ++F + I
Sbjct: 159 MLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSW 218
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN 334
+ +G + L++ R V IS+ N ++T Y + G + ++ RLF
Sbjct: 219 NCLMGGYVRK----KRLDDARSLFDRMPVRDKISW----NIMITGYAQNGLLSEARRLFE 270
Query: 335 EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEK 394
E+ +RD +WTA+VSG+ + G +E +FE+M + +EV+ +++ ++ +EK
Sbjct: 271 ELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEM----PEKNEVSWNAMIAGYVQSQQIEK 326
Query: 395 GRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
R F+ M + M+ ++ G +++AK ++MP D I WA ++S
Sbjct: 327 ARELFDQMPSRN-----TSSWNTMVTGYAQCGNIDQAKILFDEMP-QRDCISWAAMISGY 380
Query: 455 RIHGNVE 461
G E
Sbjct: 381 AQSGQSE 387
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 268/682 (39%), Positives = 413/682 (60%), Gaps = 36/682 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSW +++ G G +A+K M DG ++ T + +L + + +
Sbjct: 18 MPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGF-TPTQFTLTNVLSSCAVTQAGAV 76
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR++H ++K G GS V V + +++MY K G A F+ +P +++ +N M++
Sbjct: 77 GRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTH 136
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQFTFGS 179
G ++ + LF M D+ +SW MI G QNGL+ +A+ LF M E +A D+FT S
Sbjct: 137 LGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITS 196
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV-------- 231
VL+AC L + GKQ+HA+I+R + N V +AL+ Y K S++ A +
Sbjct: 197 VLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETD 256
Query: 232 -------------------------FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM 266
F M ++VV+WTAM+VGY QNG ++EA+ +F +M
Sbjct: 257 LNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSM 316
Query: 267 QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
G EP+ +TL +V+S CA+LA L+ G Q H R++ + L +VSNA++T Y + G+
Sbjct: 317 ITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSF 376
Query: 327 EDSHRLFNEMNVRDE-VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+ R+F+++ R E ++WT+++ A+ G+ E + LFE+ML G++PD +T +GVLSA
Sbjct: 377 PWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSA 436
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
CS AG V +G+ Y++ + E+ I P HY CM+D+L+RAG EA+ FI +MP PDAI
Sbjct: 437 CSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAI 496
Query: 446 GWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
W +LLS+CR+H N E+ + AAE LL +DP N +Y ++++Y++ G+W +++ + +
Sbjct: 497 AWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARK 556
Query: 506 EKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLH 565
EK VRK+ G SW +S++H+F ADD P D +YA ++ ++ G+VPD+ SVLH
Sbjct: 557 EKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLH 616
Query: 566 DVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREI 625
DV+ K ++L+ HSEKLAIAFGL+ P +RV+KNLRVC+DCH A K ISK+T REI
Sbjct: 617 DVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREI 676
Query: 626 LVRDAVRFHLFKNGECSCGDFW 647
+VRDA RFH F++G CSC D+W
Sbjct: 677 IVRDATRFHHFRDGLCSCKDYW 698
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 202/411 (49%), Gaps = 74/411 (18%)
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ G + ++R +F M ++D++SWT M+ GL + G EAI +M +G QFT +
Sbjct: 4 KSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTN 63
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS--------------- 224
VL++C A G+++H+F+++ V V +++++MY KC
Sbjct: 64 VLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRS 123
Query: 225 ----------------IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM-Q 267
+ AES+F +M +++VSW AM+ GY QNG +A+K+F M
Sbjct: 124 VSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLH 183
Query: 268 RNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIE 327
+ + PD+FT+ SV+S+CANL ++ G Q H L T + V+NAL++ Y K G++E
Sbjct: 184 ESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVE 243
Query: 328 DSHR---------------------------------LFNEMNVRDEVSWTALVSGYAKF 354
++ R +F MN RD V+WTA++ GY +
Sbjct: 244 NARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQN 303
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G+ +E IDLF M++ G +P+ TL VLS C+ ++ G+ + IR + +
Sbjct: 304 GRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQ-----IHCRAIRSLLEQ 358
Query: 415 YT----CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+ +I + +R+G A+ +++ + + I W +++ + HG E
Sbjct: 359 SSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGE 409
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 148/326 (45%), Gaps = 49/326 (15%)
Query: 218 MYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFT 277
M+ K + A VF M ++ VSWT M+VG + G EA+K +M +G P FT
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 278 LGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN 337
L +V+SSCA + G + H + GL S + V+N+++ YGKCG+ E + +F M
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120
Query: 338 VRDE-------------------------------VSWTALVSGYAKFGKANETIDLFEK 366
VR VSW A+++GY + G + + LF +
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180
Query: 367 ML-SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT----CMIDI 421
ML + PDE T+ VLSAC+ G V G+ V Y +R + + +I
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQ-----VHAYILRTEMAYNSQVTNALIST 235
Query: 422 LSRAGRLEEAKSFINK-MPFPPDAIGWATLLSSCRIHGNVEIG--KWAAESLLELDPYNP 478
+++G +E A+ +++ M + I + LL G V+IG + A E ++ +
Sbjct: 236 YAKSGSVENARRIMDQSMETDLNVISFTALL-----EGYVKIGDMESAREMFGVMNNRDV 290
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTM 504
++ + Y G+ D L R+M
Sbjct: 291 VAWTAMIVGYEQNGRNDEAIDLFRSM 316
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 540 bits (1391), Expect = e-150, Method: Compositional matrix adjust.
Identities = 268/682 (39%), Positives = 413/682 (60%), Gaps = 36/682 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSW +++ G G +A+K M DG ++ T + +L + + +
Sbjct: 124 MPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGF-TPTQFTLTNVLSSCAVTQAGAV 182
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR++H ++K G GS V V + +++MY K G A F+ +P +++ +N M++
Sbjct: 183 GRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTH 242
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQFTFGS 179
G ++ + LF M D+ +SW MI G QNGL+ +A+ LF M E +A D+FT S
Sbjct: 243 LGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITS 302
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV-------- 231
VL+AC L + GKQ+HA+I+R + N V +AL+ Y K S++ A +
Sbjct: 303 VLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETD 362
Query: 232 -------------------------FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM 266
F M ++VV+WTAM+VGY QNG ++EA+ +F +M
Sbjct: 363 LNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSM 422
Query: 267 QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
G EP+ +TL +V+S CA+LA L+ G Q H R++ + L +VSNA++T Y + G+
Sbjct: 423 ITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSF 482
Query: 327 EDSHRLFNEMNVRDE-VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+ R+F+++ R E ++WT+++ A+ G+ E + LFE+ML G++PD +T +GVLSA
Sbjct: 483 PWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSA 542
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
CS AG V +G+ Y++ + E+ I P HY CM+D+L+RAG EA+ FI +MP PDAI
Sbjct: 543 CSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAI 602
Query: 446 GWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
W +LLS+CR+H N E+ + AAE LL +DP N +Y ++++Y++ G+W +++ + +
Sbjct: 603 AWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARK 662
Query: 506 EKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLH 565
EK VRK+ G SW +S++H+F ADD P D +YA ++ ++ G+VPD+ SVLH
Sbjct: 663 EKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLH 722
Query: 566 DVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREI 625
DV+ K ++L+ HSEKLAIAFGL+ P +RV+KNLRVC+DCH A K ISK+T REI
Sbjct: 723 DVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREI 782
Query: 626 LVRDAVRFHLFKNGECSCGDFW 647
+VRDA RFH F++G CSC D+W
Sbjct: 783 IVRDATRFHHFRDGLCSCKDYW 804
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 133/476 (27%), Positives = 237/476 (49%), Gaps = 80/476 (16%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKL----GLIYDAKRGFDELP--EKNIVMYNTM 114
GR IH +K G + ++ + L+ Y + G + DA+R FDE+P +N+ +N++
Sbjct: 45 GRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNSL 104
Query: 115 ITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
++ + G + ++R +F M ++D++SWT M+ GL + G EAI +M +G Q
Sbjct: 105 LSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQ 164
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS---------- 224
FT +VL++C A G+++H+F+++ V V +++++MY KC
Sbjct: 165 FTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFER 224
Query: 225 ---------------------IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIF 263
+ AES+F +M +++VSW AM+ GY QNG +A+K+F
Sbjct: 225 MPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLF 284
Query: 264 CNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGK 322
M + + PD+FT+ SV+S+CANL ++ G Q H L T + V+NAL++ Y K
Sbjct: 285 SRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAK 344
Query: 323 CGNIEDSHR---------------------------------LFNEMNVRDEVSWTALVS 349
G++E++ R +F MN RD V+WTA++
Sbjct: 345 SGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIV 404
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
GY + G+ +E IDLF M++ G +P+ TL VLS C+ ++ G+ + IR
Sbjct: 405 GYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQ-----IHCRAIR 459
Query: 410 PIHDHYT----CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+ + + +I + +R+G A+ +++ + + I W +++ + HG E
Sbjct: 460 SLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGE 515
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 156/338 (46%), Gaps = 49/338 (14%)
Query: 206 KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCN 265
+ NVF ++L+ M+ K + A VF M ++ VSWT M+VG + G EA+K +
Sbjct: 95 RRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLD 154
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M +G P FTL +V+SSCA + G + H + GL S + V+N+++ YGKCG+
Sbjct: 155 MTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGD 214
Query: 326 IEDSHRLFNEMNVRDE-------------------------------VSWTALVSGYAKF 354
E + +F M VR VSW A+++GY +
Sbjct: 215 SETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQN 274
Query: 355 GKANETIDLFEKML-SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
G + + LF +ML + PDE T+ VLSAC+ G V G+ V Y +R
Sbjct: 275 GLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQ-----VHAYILRTEMA 329
Query: 414 HYT----CMIDILSRAGRLEEAKSFINK-MPFPPDAIGWATLLSSCRIHGNVEIG--KWA 466
+ + +I +++G +E A+ +++ M + I + LL G V+IG + A
Sbjct: 330 YNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALL-----EGYVKIGDMESA 384
Query: 467 AESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTM 504
E ++ + ++ + Y G+ D L R+M
Sbjct: 385 REMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSM 422
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 113/325 (34%), Gaps = 106/325 (32%)
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGK----CGNIEDSHRLFN------ 334
C A+ G H R++ GL++ + N L+++YG+ G + D+ RLF+
Sbjct: 36 CQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLAR 95
Query: 335 ---------------------------EMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
EM RD VSWT +V G + G+ E I M
Sbjct: 96 RNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDM 155
Query: 368 LSHGLKPDEVTLIGVLSAC--SRAGLVEKGRHYFEIMVKEYGIRPIHD------------ 413
+ G P + TL VLS+C ++AG V + H F + + P+ +
Sbjct: 156 TADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDS 215
Query: 414 ----------------HYTCMIDILSRAGRLEEAKSFINKMP------------------ 439
+ M+ + + GR++ A+S MP
Sbjct: 216 ETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNG 275
Query: 440 -----------------FPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD-PYNPASY 481
PD ++LS+C GNV IGK +L + YN
Sbjct: 276 LDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVT 335
Query: 482 VLLSSIYASKGKWDHVSQLRRTMRE 506
L S YA G V RR M +
Sbjct: 336 NALISTYAKSGS---VENARRIMDQ 357
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 278/692 (40%), Positives = 412/692 (59%), Gaps = 54/692 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTML-----IMSSSRRCVD 59
D V +N +I+G++ + A++++ +L++G TF+++L I+ ++C
Sbjct: 113 DTVCYNAMITGYSHNNDGFGAIELFRDLLRNGF-RPDNFTFTSVLGALALIVEDEKQC-- 169
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGL---------IYDAKRGFDELPEKNIVM 110
+QIH ++K G G V + L+ ++ K + A++ FDE+ E++ +
Sbjct: 170 --QQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELS 227
Query: 111 YNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL 170
+ TMI G +R G ++ +R+ GM +K ++W MI+G + +G EA+++FR+M L G+
Sbjct: 228 WTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGI 287
Query: 171 AMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNV----FVGSALVDMYCKCKSIK 226
D+FT+ SVL+AC GKQ+HA+I+R + + ++ V +AL +Y KC +
Sbjct: 288 QWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVD 347
Query: 227 YAESVFRTMAWKNVVSWTAMLVGY-------------------------------GQNGC 255
A VF M K++VSW A+L GY QNG
Sbjct: 348 EARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGF 407
Query: 256 SEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNA 315
EE++K+F M+ G EP D+ I +CA LA+L G Q H + + G S ++ NA
Sbjct: 408 GEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNA 467
Query: 316 LVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPD 375
L+T Y KCG +E +H LF M D VSW A+++ + G + ++LFE ML + PD
Sbjct: 468 LITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPD 527
Query: 376 EVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFI 435
+T + VLS CS AGLVE+G YF+ M YGI P DHY MID+L RAG+ EAK I
Sbjct: 528 RITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMI 587
Query: 436 NKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWD 495
MP P W LL+ CRIHGN+++G AAE L EL P + +YVLLS++YA+ G+WD
Sbjct: 588 ETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWD 647
Query: 496 HVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEG 555
V+++R+ MR+KGV+K+PGCSWI+ +++VH+F DD P +Y LE+L KM K G
Sbjct: 648 DVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLG 707
Query: 556 YVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATK 615
Y+PD VLHD+E +K +L+ HSEKLA+ FGLL +P G +RV KNLR+C DCHNA K
Sbjct: 708 YIPDTKFVLHDMESEQKEYVLSTHSEKLAVGFGLLKLPLGATVRVFKNLRICGDCHNAFK 767
Query: 616 YISKITQREILVRDAVRFHLFKNGECSCGDFW 647
++SK+ +REI+VRD RFH FKNGECSCG++W
Sbjct: 768 FMSKVVEREIVVRDGKRFHHFKNGECSCGNYW 799
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/478 (26%), Positives = 216/478 (45%), Gaps = 80/478 (16%)
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+ R +H H++ GF ++ + L+D+Y K + A FDE+ + +IV T+I
Sbjct: 33 IARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHS 92
Query: 120 RRGLVEESRRLFRG--MKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
G +R +F + +D++ + MITG N AI+LFR++ G D FTF
Sbjct: 93 SAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTF 152
Query: 178 GSVLTACGGLLALE-EGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK---------SIKY 227
SVL A ++ E + +QIH ++++ V +AL+ ++ KC +
Sbjct: 153 TSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAA 212
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSE------------------------------ 257
A +F M ++ +SWT M+ GY +NG +
Sbjct: 213 ARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFF 272
Query: 258 -EAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT----GLISFITV 312
EA+++F M GI+ D+FT SV+S+CAN G Q H L T L ++V
Sbjct: 273 LEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSV 332
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN-------------- 358
+NAL T Y KCG ++++ ++FN+M V+D VSW A++SGY G+ +
Sbjct: 333 NNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNL 392
Query: 359 -----------------ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEI 401
E++ LF +M S G +P + G + AC+ + GR
Sbjct: 393 LTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQ 452
Query: 402 MVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+V+ G +I + ++ G +E A MP+ D++ W ++++ HG+
Sbjct: 453 LVR-LGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPY-LDSVSWNAMIAALGQHGH 508
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 171/394 (43%), Gaps = 83/394 (21%)
Query: 193 GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF----------RT-------- 234
+ +HA +I + K ++ + L+D+YCK + A +F RT
Sbjct: 34 ARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSS 93
Query: 235 ---------------MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLG 279
+ ++ V + AM+ GY N A+++F ++ RNG PD+FT
Sbjct: 94 AGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFT 153
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGLISFIT-VSNALVTFYGKCG---------NIEDS 329
SV+ + A + E+ Q ++V F+T V NAL++ + KC + +
Sbjct: 154 SVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAA 213
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGKAN------------------------------- 358
+LF+EM RDE+SWT +++GY + G+ +
Sbjct: 214 RKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFL 273
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
E +++F KM G++ DE T VLSAC+ AG G+ +++ RP D +
Sbjct: 274 EALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEP-RPSLDFSLSV 332
Query: 419 IDILS----RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
+ L+ + G+++EA+ N+MP D + W +LS G ++ K E E+
Sbjct: 333 NNALATLYWKCGKVDEARQVFNQMPV-KDLVSWNAILSGYVNAGRIDEAKSFFE---EMP 388
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
N ++ ++ S A G + +L M+ +G
Sbjct: 389 ERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEG 422
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 114/287 (39%), Gaps = 75/287 (26%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLM---------------LKDGLGNLSRITF 45
MP D VSWN ++SG+ + G +++A + M ++G G S F
Sbjct: 356 MPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLF 415
Query: 46 STM---------------LIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKL 90
+ M +I + + GRQ+H +++ GF S + G+ L+ MYAK
Sbjct: 416 NRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKC 475
Query: 91 GLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLM 150
G++ A F +P + V +N M I L
Sbjct: 476 GVVEAAHCLFLTMPYLDSVSWNAM-------------------------------IAALG 504
Query: 151 QNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQ-------IHAFIIRN 203
Q+G +A++LF M E + D+ TF +VL+ C +EEG + ++
Sbjct: 505 QHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGE 564
Query: 204 DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK-NVVSWTAMLVG 249
DH + ++D+ C+ A+ + TM + W A+L G
Sbjct: 565 DHY------ARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAG 605
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 19/150 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP+ D VSWN +I+ HG A++++ LMLK+ + RITF T+L S V+
Sbjct: 488 MPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILP-DRITFLTVLSTCSHAGLVEE 546
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKL-------GLIYDAKRGFDELP-EKNIVMYN 112
G + F S ++ P D YA++ G +AK + +P E ++
Sbjct: 547 GHRY------FKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWE 600
Query: 113 TMITGLLRRGL----VEESRRLFRGMKDKD 138
++ G G ++ + RLF M D
Sbjct: 601 ALLAGCRIHGNMDLGIQAAERLFELMPQHD 630
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 276/647 (42%), Positives = 390/647 (60%), Gaps = 32/647 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSW L +A G +++K Y+ ML++G+ SRIT+ +L S ++
Sbjct: 206 MASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGV-RPSRITYMNVLSACGSLAALEK 264
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIH I++ S V V + L MY K G + DA
Sbjct: 265 GKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDA------------------------ 300
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
R +F + ++D I+W TMI GL+ +G EA +F M E +A D+ T+ ++
Sbjct: 301 -------REVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAI 353
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+AC L GK+IHA +++ +V G+AL++MY K S+K A VF M ++V
Sbjct: 354 LSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDV 413
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWTA++ GY G E+ F M + G+E + T V+ +C+N +L+ G + H
Sbjct: 414 VSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAE 473
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ G+ + + V+NAL++ Y KCG++ED+ R+ M+ RD V+W L+ G A+ G+ E
Sbjct: 474 VVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEA 533
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ FE M S ++P+ T + V+SAC LVE+GR F M K+YGI P HY CM+D
Sbjct: 534 LQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVD 593
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
IL+RAG L EA+ I MPF P A W LL++CR HGNVEIG+ AAE L+L+P N +
Sbjct: 594 ILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGT 653
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YV LS IYA+ G W V++LR+ M+E+GV+K+PG SWI+ VH F A D S P +++I
Sbjct: 654 YVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEI 713
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y+ELE L +++ GYVPD V+HD++ K + + HHSEKLAIA+GL+ PP PIRV
Sbjct: 714 YSELEALTKQIKSLGYVPDTRFVMHDLDQEGKERAVCHHSEKLAIAYGLISTPPETPIRV 773
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC+DCH ATK+ISKIT REI+ RDA RFH FKNGECSCGD+W
Sbjct: 774 SKNLRVCTDCHTATKFISKITGREIIARDAHRFHHFKNGECSCGDYW 820
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 154/491 (31%), Positives = 253/491 (51%), Gaps = 65/491 (13%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSWN++ISG+A G +A ++ LM ++GL + TF ++L SS ++ GR++H
Sbjct: 111 VSWNVMISGYAHRGLGQEAFNLFTLMQQEGL-EPDKFTFVSILSACSSPAALNWGREVHV 169
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+++ G + VG+ L+ MYAK G + DA+R FD + ++ V + T+ TG
Sbjct: 170 RVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTL-TG--------- 219
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
++G +E++ + M EG+ + T+ +VL+ACG
Sbjct: 220 ---------------------AYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGS 258
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L ALE+GKQIHA I+ ++H +V V +AL MY KC ++K A VF + ++V++W M
Sbjct: 259 LAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTM 318
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ G +G EEA +F M + + PD T +++S+CA L G + H R++ GL
Sbjct: 319 IGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGL 378
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+S + NAL+ Y K G+++D+ ++F+ M RD VSWTALV GYA G+ E+ F+K
Sbjct: 379 VSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKK 438
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRH-----------------------YFEIMV 403
ML G++ +++T + VL ACS ++ G+ YF+
Sbjct: 439 MLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGS 498
Query: 404 KEYGIRPIHDHYT-------CMIDILSRAGR-LEEAKSF--INKMPFPPDAIGWATLLSS 453
E IR T +I L++ GR LE + F + P+A + ++S+
Sbjct: 499 VEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSA 558
Query: 454 CRIHGNVEIGK 464
CR+ VE G+
Sbjct: 559 CRVRNLVEEGR 569
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/410 (31%), Positives = 219/410 (53%), Gaps = 35/410 (8%)
Query: 44 TFSTMLIMSSSRRCVDL--GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFD 101
++ + ++ S + DL G+Q+H HIL+FG
Sbjct: 44 SYDYVKLLQSCVKAKDLAVGKQVHEHILRFGM---------------------------- 75
Query: 102 ELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDL 161
+ N+ + NT++ + G V E+RRLF +K +SW MI+G GL +EA +L
Sbjct: 76 ---KPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNL 132
Query: 162 FREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK 221
F M+ EGL D+FTF S+L+AC AL G+++H ++ +N VG+AL+ MY K
Sbjct: 133 FTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAK 192
Query: 222 CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
C S++ A VF MA ++ VSWT + Y ++G ++E++K + M + G+ P T +V
Sbjct: 193 CGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNV 252
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE 341
+S+C +LA+LE+G Q H + + + S + VS AL Y KCG ++D+ +F + RD
Sbjct: 253 LSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDV 312
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEI 401
++W ++ G G+ E +F +ML + PD VT + +LSAC+R G + G+
Sbjct: 313 IAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHAR 372
Query: 402 MVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
VK+ G+ +I++ S+AG +++A+ ++MP D + W L+
Sbjct: 373 AVKD-GLVSDVRFGNALINMYSKAGSMKDARQVFDRMP-KRDVVSWTALV 420
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/338 (33%), Positives = 179/338 (52%), Gaps = 33/338 (9%)
Query: 160 DLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMY 219
D+ + + +G +D + + +L +C L GKQ+H I+R K NV++ + L+ +Y
Sbjct: 30 DVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLY 89
Query: 220 CKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLG 279
C S+ A +F + K+VVSW M+ GY G +EA +F MQ+ G+EPD FT
Sbjct: 90 VHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFV 149
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
S++S+C++ A+L G + H R + GL + TV NAL++ Y KCG++ D+ R+F+ M R
Sbjct: 150 SILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASR 209
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR--- 396
DEVSWT L YA+ G A E++ + ML G++P +T + VLSAC +EKG+
Sbjct: 210 DEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIH 269
Query: 397 -------HYFEIMV-----KEY----GIRPIHDHYTC-----------MIDILSRAGRLE 429
H+ ++ V K Y ++ + + C MI L +G+LE
Sbjct: 270 AQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLE 329
Query: 430 EAKSFINKM---PFPPDAIGWATLLSSCRIHGNVEIGK 464
EA ++M PD + + +LS+C G + GK
Sbjct: 330 EAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGK 367
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 274/690 (39%), Positives = 413/690 (59%), Gaps = 44/690 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + VSWN L S + +AV ++ M+ G+ + + S+M+ + R
Sbjct: 218 IPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGI-KPNEFSLSSMVNACTGLRDSSR 276
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL- 119
G+ IHG+++K G+ F + LVDMYAK+G + DA F+++ + +IV +N +I G +
Sbjct: 277 GKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVL 336
Query: 120 ------------------------------------------RRGLVEESRRLFRGMKDK 137
+ L+E++R F + +K
Sbjct: 337 HEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEK 396
Query: 138 DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIH 197
D I+W +I+G Q + EA+ LF EM EG+ +Q T ++L + GL + +Q+H
Sbjct: 397 DLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVH 456
Query: 198 AFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSE 257
+++ +++V ++L+D Y KC ++ AE +F ++VS+T+M+ Y Q G E
Sbjct: 457 GLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGE 516
Query: 258 EAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALV 317
EA+K+F MQ ++PD F S++++CANL++ E+G Q H L G + I N+LV
Sbjct: 517 EALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLV 576
Query: 318 TFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEV 377
Y KCG+I+D+ R F+E+ R VSW+A++ G A+ G + + LF +ML G+ P+ +
Sbjct: 577 NMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHI 636
Query: 378 TLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINK 437
TL+ VL AC+ AGLV + + YFE M + +G +P+ +HY CMID+L RAG++ EA +NK
Sbjct: 637 TLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNK 696
Query: 438 MPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHV 497
MPF +A W LL + RIH +VE+G+ AAE L L+P ++VLL++IYAS GKW++V
Sbjct: 697 MPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENV 756
Query: 498 SQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYV 557
+++RR MR+ V+K+PG SWI+ K +V+ F D S S +IYA+L++L+ M K GYV
Sbjct: 757 AEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYV 816
Query: 558 PDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYI 617
P + LHDVE SEK +L HHSEKLA+AFGL+ P G PIRV KNLRVC DCH A KYI
Sbjct: 817 PMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYI 876
Query: 618 SKITQREILVRDAVRFHLFKNGECSCGDFW 647
KI REI+VRD RFH FK+G CSCGD+W
Sbjct: 877 CKIVSREIIVRDINRFHHFKDGSCSCGDYW 906
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 150/542 (27%), Positives = 244/542 (45%), Gaps = 99/542 (18%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW+ LISG+A +G A+ ++ M G+ + TFS++L S + + +G+Q+
Sbjct: 121 DLVSWSALISGYAQNGLGGGALMAFHEMHLLGV-KCNEFTFSSVLKACSIVKDLRIGKQV 179
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG ++ GF VFV + LV MYAK D+KR FDE+PE+N+V
Sbjct: 180 HGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVV--------------- 224
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
SW + + +Q EA+ LF EM L G+ ++F+ S++ AC
Sbjct: 225 ----------------SWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNAC 268
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
GL GK IH ++I+ + + F +ALVDMY K + A SVF + ++VSW
Sbjct: 269 TGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWN 328
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
A++ G + E+A+++ M+R Q H +
Sbjct: 329 AVIAGCVLHEHHEQALELLGQMKR---------------------------QLHSSLMKM 361
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
+ S + VS LV Y KC +ED+ FN + +D ++W A++SGY+++ + E + LF
Sbjct: 362 DMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLF 421
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE------YGIRPIHDHY--- 415
+M G+ ++ TL +L + + +V R + VK Y + + D Y
Sbjct: 422 VEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKC 481
Query: 416 ---------------------TCMIDILSRAGRLEEA-KSFI--NKMPFPPDAIGWATLL 451
T MI ++ G+ EEA K F+ M PD ++LL
Sbjct: 482 SHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLL 541
Query: 452 SSCRIHGNVEIGKWAAESLLE----LDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREK 507
++C E GK +L+ LD + S V ++YA G D + + E+
Sbjct: 542 NACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLV---NMYAKCGSIDDAGRAFSELTER 598
Query: 508 GV 509
G+
Sbjct: 599 GI 600
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 180/370 (48%), Gaps = 39/370 (10%)
Query: 41 SRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF 100
+ +++S +L + + + G QIH HI K G + + L+++Y+K R F
Sbjct: 55 TSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKC-------RXF 107
Query: 101 DELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAID 160
R LV+ES + D +SW+ +I+G QNGL A+
Sbjct: 108 G-----------------YARKLVDES-------SEPDLVSWSALISGYAQNGLGGGALM 143
Query: 161 LFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYC 220
F EM L G+ ++FTF SVL AC + L GKQ+H ++ + + +VFV + LV MY
Sbjct: 144 AFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYA 203
Query: 221 KCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGS 280
KC ++ +F + +NVVSW A+ Y Q EAV +F M +GI+P++F+L S
Sbjct: 204 KCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSS 263
Query: 281 VISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD 340
++++C L G HG + G +NALV Y K G++ D+ +F ++ D
Sbjct: 264 MVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPD 323
Query: 341 EVSWTALVSGYAKFGKANETIDLFEKM--------LSHGLKPDEVTLIGVLSACSRAGLV 392
VSW A+++G + ++L +M + ++ D +G++ S+ L+
Sbjct: 324 IVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLL 383
Query: 393 EKGRHYFEIM 402
E R F ++
Sbjct: 384 EDARMAFNLL 393
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 155/287 (54%), Gaps = 4/287 (1%)
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
++ +L+ C +L G QIHA I ++ D+ + + L+++Y KC+ YA +
Sbjct: 58 SYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDES 117
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
+ ++VSW+A++ GY QNG A+ F M G++ ++FT SV+ +C+ + L G
Sbjct: 118 SEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGK 177
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
Q HG +V+G + V+N LV Y KC DS RLF+E+ R+ VSW AL S Y +
Sbjct: 178 QVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXD 237
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK-EYGIRPIHDH 414
E + LF +M+ G+KP+E +L +++AC+ +G+ ++K Y P +
Sbjct: 238 FCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSAN 297
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
++D+ ++ G L +A S K+ PD + W +++ C +H + E
Sbjct: 298 --ALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAGCVLHEHHE 341
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%)
Query: 258 EAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALV 317
+ I + + P + ++S C SL G Q H +GL ++ N L+
Sbjct: 39 QTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLI 98
Query: 318 TFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEV 377
Y KC + +L +E + D VSW+AL+SGYA+ G + F +M G+K +E
Sbjct: 99 NLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEF 158
Query: 378 TLIGVLSACSRAGLVEKGRHYFEIMV 403
T VL ACS + G+ ++V
Sbjct: 159 TFSSVLKACSIVKDLRIGKQVHGVVV 184
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 267/682 (39%), Positives = 412/682 (60%), Gaps = 36/682 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSW +++ G G +A+K M DG ++ T + +L + + +
Sbjct: 124 MPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGF-TPTQFTLTNVLSSCAVTQAGAV 182
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR++H ++K G GS V V + +++MY K G A F+ +P +++ +N M++
Sbjct: 183 GRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTH 242
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQFTFGS 179
G ++ + LF M + +SW MI G QNGL+ +A+ LF M E +A D+FT S
Sbjct: 243 LGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITS 302
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV-------- 231
VL+AC L + GKQ+HA+I+R + N V +AL+ Y K S++ A +
Sbjct: 303 VLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETD 362
Query: 232 -------------------------FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM 266
F M ++VV+WTAM+VGY QNG ++EA+ +F +M
Sbjct: 363 LNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSM 422
Query: 267 QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
G EP+ +TL +V+S CA+LA L+ G Q H R++ + L +VSNA++T Y + G+
Sbjct: 423 ITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSF 482
Query: 327 EDSHRLFNEMNVRDE-VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+ R+F+++ R E ++WT+++ A+ G+ E + LFE+ML G++PD +T +GVLSA
Sbjct: 483 PWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSA 542
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
CS AG V +G+ Y++ + E+ I P HY CM+D+L+RAG EA+ FI +MP PDAI
Sbjct: 543 CSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAI 602
Query: 446 GWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
W +LLS+CR+H N E+ + AAE LL +DP N +Y ++++Y++ G+W +++ + +
Sbjct: 603 AWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARK 662
Query: 506 EKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLH 565
EK VRK+ G SW +S++H+F ADD P D +YA ++ ++ G+VPD+ SVLH
Sbjct: 663 EKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLH 722
Query: 566 DVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREI 625
DV+ K ++L+ HSEKLAIAFGL+ P +RV+KNLRVC+DCH A K ISK+T REI
Sbjct: 723 DVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREI 782
Query: 626 LVRDAVRFHLFKNGECSCGDFW 647
+VRDA RFH F++G CSC D+W
Sbjct: 783 IVRDATRFHHFRDGLCSCKDYW 804
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 133/476 (27%), Positives = 237/476 (49%), Gaps = 80/476 (16%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKL----GLIYDAKRGFDELP--EKNIVMYNTM 114
GR IH +K G + ++ + L+ Y + G + DA+R FDE+P +N+ +N++
Sbjct: 45 GRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNSL 104
Query: 115 ITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
++ + G + ++R +F M ++D++SWT M+ GL + G EAI +M +G Q
Sbjct: 105 LSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQ 164
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS---------- 224
FT +VL++C A G+++H+F+++ V V +++++MY KC
Sbjct: 165 FTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFER 224
Query: 225 ---------------------IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIF 263
+ AES+F +M +++VSW AM+ GY QNG +A+K+F
Sbjct: 225 MPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLF 284
Query: 264 CNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGK 322
M + + PD+FT+ SV+S+CANL ++ G Q H L T + V+NAL++ Y K
Sbjct: 285 SRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAK 344
Query: 323 CGNIEDSHR---------------------------------LFNEMNVRDEVSWTALVS 349
G++E++ R +F MN RD V+WTA++
Sbjct: 345 SGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIV 404
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
GY + G+ +E IDLF M++ G +P+ TL VLS C+ ++ G+ + IR
Sbjct: 405 GYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQ-----IHCRAIR 459
Query: 410 PIHDHYT----CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+ + + +I + +R+G A+ +++ + + I W +++ + HG E
Sbjct: 460 SLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGE 515
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 156/338 (46%), Gaps = 49/338 (14%)
Query: 206 KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCN 265
+ NVF ++L+ M+ K + A VF M ++ VSWT M+VG + G EA+K +
Sbjct: 95 RRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLD 154
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M +G P FTL +V+SSCA + G + H + GL S + V+N+++ YGKCG+
Sbjct: 155 MTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGD 214
Query: 326 IEDSHRLFNEMNVRDE-------------------------------VSWTALVSGYAKF 354
E + +F M VR VSW A+++GY +
Sbjct: 215 AETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQN 274
Query: 355 GKANETIDLFEKML-SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
G + + LF +ML + PDE T+ VLSAC+ G V G+ V Y +R
Sbjct: 275 GLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQ-----VHAYILRTEMA 329
Query: 414 HYT----CMIDILSRAGRLEEAKSFINK-MPFPPDAIGWATLLSSCRIHGNVEIG--KWA 466
+ + +I +++G +E A+ +++ M + I + LL G V+IG + A
Sbjct: 330 YNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALL-----EGYVKIGDMESA 384
Query: 467 AESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTM 504
E ++ + ++ + Y G+ D L R+M
Sbjct: 385 REMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSM 422
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 113/325 (34%), Gaps = 106/325 (32%)
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGK----CGNIEDSHRLFN------ 334
C A+ G H R++ GL++ + N L+++YG+ G + D+ RLF+
Sbjct: 36 CQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLAR 95
Query: 335 ---------------------------EMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
EM RD VSWT +V G + G+ E I M
Sbjct: 96 RNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDM 155
Query: 368 LSHGLKPDEVTLIGVLSAC--SRAGLVEKGRHYFEIMVKEYGIRPIHD------------ 413
+ G P + TL VLS+C ++AG V + H F + + P+ +
Sbjct: 156 TADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDA 215
Query: 414 ----------------HYTCMIDILSRAGRLEEAKSFINKMP------------------ 439
+ M+ + + GR++ A+S MP
Sbjct: 216 ETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNG 275
Query: 440 -----------------FPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD-PYNPASY 481
PD ++LS+C GNV IGK +L + YN
Sbjct: 276 LDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVT 335
Query: 482 VLLSSIYASKGKWDHVSQLRRTMRE 506
L S YA G V RR M +
Sbjct: 336 NALISTYAKSGS---VENARRIMDQ 357
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 268/641 (41%), Positives = 407/641 (63%), Gaps = 32/641 (4%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V WN+++ + G+++++ ++ M +GL ++ T+ ++L +S +DLG QIH
Sbjct: 381 VLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMP-NQYTYPSILRTCTSLGALDLGEQIHT 439
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++K GF V+V S L+DMYAK G + A+ G+L+R
Sbjct: 440 QVIKSGFQFNVYVCSVLIDMYAKHGELDTAR-------------------GILQR----- 475
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
++++D +SWT MI G Q+ L EA+ LF+EM +G+ D F S ++AC G
Sbjct: 476 -------LREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAG 528
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+ AL +G+QIHA + + +++ +G+ALV +Y +C + A F + K+ +SW A+
Sbjct: 529 IQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNAL 588
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ G+ Q+G EEA+++F M + G+E + FT GS +S+ AN A++++G Q H + TG
Sbjct: 589 ISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGY 648
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
S SN L+T Y KCG+IED+ R F EM ++ VSW A+++GY++ G +E + LFE+
Sbjct: 649 DSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEE 708
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M GL P+ VT +GVLSACS GLV +G YF M KE+G+ P +HY C++D+L RA
Sbjct: 709 MKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAA 768
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
L A+ FI +MP PDA+ W TLLS+C +H N+EIG++AA LLEL+P + A+YVLLS+
Sbjct: 769 LLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSN 828
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
+YA GKWD+ + R+ M+++GV+K+PG SWI+ K+ +H F D P ++QIY ++
Sbjct: 829 MYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDD 888
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
LN + + GYV D ++L+DVE +K HSEKLA+AFGLL + +PIRV+KNLRV
Sbjct: 889 LNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRV 948
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C+DCHN K++SKI+ R I+VRDA RFH F+ G CSC D+W
Sbjct: 949 CNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 989
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 134/458 (29%), Positives = 240/458 (52%), Gaps = 34/458 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +S+N LISG A G + A++++ M D + +T +++L +S
Sbjct: 274 MHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCM-KPDCVTVASLLSACASVGAGYK 332
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H +++K G S + + L+D+Y K I A F +N+V++N M+ +
Sbjct: 333 GKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQ 392
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G + ES W +F +M++EGL +Q+T+ S+
Sbjct: 393 LGNLSESY-------------W------------------IFLQMQIEGLMPNQYTYPSI 421
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C L AL+ G+QIH +I++ + NV+V S L+DMY K + A + + + ++V
Sbjct: 422 LRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDV 481
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWTAM+ GY Q+ EA+K+F M+ GI D+ S IS+CA + +L +G Q H +
Sbjct: 482 VSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQ 541
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
S ++G +++ NALV+ Y +CG +D++ F +++ +D +SW AL+SG+A+ G E
Sbjct: 542 SYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEA 601
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ +F +M G++ + T +SA + +++G+ +M+K G + +I
Sbjct: 602 LQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKT-GYDSETEASNVLIT 660
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ S+ G +E+AK +MP + + W +++ HG
Sbjct: 661 LYSKCGSIEDAKREFFEMP-EKNVVSWNAMITGYSQHG 697
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 131/459 (28%), Positives = 230/459 (50%), Gaps = 38/459 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW +ISG + +G ++A+ ++ M K + + FS++L + LG Q+
Sbjct: 177 DSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYV-FSSVLSACTKIELFKLGEQL 235
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG I+K+G S FV + LV +Y++ G + A++
Sbjct: 236 HGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQ-------------------------- 269
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+F M +D IS+ ++I+GL Q G A+ LF +M+L+ + D T S+L+AC
Sbjct: 270 -----IFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSAC 324
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+ A +GKQ+H+++I+ ++ + +L+D+Y KC I+ A F T +NVV W
Sbjct: 325 ASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWN 384
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
MLV YGQ G E+ IF MQ G+ P+ +T S++ +C +L +L+ G Q H + + +
Sbjct: 385 VMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKS 444
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G + V + L+ Y K G ++ + + + D VSWTA+++GY + E + LF
Sbjct: 445 GFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLF 504
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY--GIRPIHDHYTCMIDIL 422
++M + G++ D + +SAC+ + +G+ +I + Y G ++ +
Sbjct: 505 QEMENQGIRSDNIGFSSAISACAGIQALNQGQ---QIHAQSYISGYSEDLSIGNALVSLY 561
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+R GR ++A K+ D I W L+S G+ E
Sbjct: 562 ARCGRAQDAYLAFEKID-AKDNISWNALISGFAQSGHCE 599
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 146/553 (26%), Positives = 253/553 (45%), Gaps = 82/553 (14%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+++H I K GF +GS L+D+Y G + +A + FD++P N+
Sbjct: 29 AKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSF---------- 78
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
W +I+GL+ L + + LF M E + D+ TF SV
Sbjct: 79 ---------------------WNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASV 117
Query: 181 LTAC-GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
L AC GG + +QIHA II + + V + L+D+Y K + A+ VF + K+
Sbjct: 118 LRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKD 177
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VSW AM+ G QNG +EA+ +FC M ++ + P + SV+S+C + + G Q HG
Sbjct: 178 SVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHG 237
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ GL S V NALVT Y + GN+ + ++F++M+ RD +S+ +L+SG A+ G ++
Sbjct: 238 FIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDR 297
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH-------------------YFE 400
+ LFEKM +KPD VT+ +LSAC+ G KG+ +
Sbjct: 298 ALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLD 357
Query: 401 IMVKEYGIRPIHDHY-----------TCMIDILSRAGRLEEAKSFINKMPFP---PDAIG 446
+ VK + I H+++ M+ + G L E+ +M P+
Sbjct: 358 LYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYT 417
Query: 447 WATLLSSCRIHGNVEIGKWAAESLLELD-PYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
+ ++L +C G +++G+ +++ +N +L +YA G+ D + + +R
Sbjct: 418 YPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLR 477
Query: 506 EKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLH 565
E+ V + + + + ++ D ++AE KL ++M +G D
Sbjct: 478 EEDV--------VSWTAMIAGYTQHD--------LFAEALKLFQEMENQGIRSDNIGFSS 521
Query: 566 DVELSEKIKMLNH 578
+ I+ LN
Sbjct: 522 AISACAGIQALNQ 534
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 224/459 (48%), Gaps = 37/459 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + WN +ISG + + + +++LM+ + + S + S + +
Sbjct: 71 IPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQV 130
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
QIH I+ GFGS V +PL+D+Y+K G + AK F+ L K+ V + MI+G
Sbjct: 131 TEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISG--- 187
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
L QNG E EAI LF +M + + F SV
Sbjct: 188 ----------------------------LSQNGREDEAILLFCQMHKSAVIPTPYVFSSV 219
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+AC + + G+Q+H FI++ FV +ALV +Y + ++ AE +F M ++
Sbjct: 220 LSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDR 279
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+S+ +++ G Q G S+ A+++F MQ + ++PD T+ S++S+CA++ + +G Q H
Sbjct: 280 ISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSY 339
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ G+ S + + +L+ Y KC +IE +H F + V W ++ Y + G +E+
Sbjct: 340 VIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSES 399
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC--M 418
+F +M GL P++ T +L C+ G ++ G ++K G + + Y C +
Sbjct: 400 YWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKS-GFQ--FNVYVCSVL 456
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIH 457
ID+ ++ G L+ A+ + ++ D + W +++ H
Sbjct: 457 IDMYAKHGELDTARGILQRLR-EEDVVSWTAMIAGYTQH 494
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 160/353 (45%), Gaps = 10/353 (2%)
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M G+ + T+ + C +L + K++HA I ++ +GS L+D+Y
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A +F + NV W ++ G + + + +F M + PD+ T SV+ +
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 285 CA-NLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
C+ A + Q H + + G S V N L+ Y K G+++ + +F + ++D VS
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
W A++SG ++ G+ +E I LF +M + P VLSAC++ L + G +V
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIV 240
Query: 404 KEYGIRPIHDHYTC--MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
K +G+ + + C ++ + SR G L A+ +KM D I + +L+S G +
Sbjct: 241 K-WGLSS--ETFVCNALVTLYSRWGNLIAAEQIFSKM-HRRDRISYNSLISGLAQRGFSD 296
Query: 462 IGKWAAESLLELDPYNPASYVLLS--SIYASKGKWDHVSQLRRTMREKGVRKD 512
E ++LD P + S S AS G QL + + G+ D
Sbjct: 297 RALQLFEK-MQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSD 348
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 62/123 (50%), Gaps = 11/123 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSWN +I+G++ HG ++AV ++ M + GL + +TF +L S V+
Sbjct: 678 MPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMP-NHVTFVGVLSACSHVGLVNE 736
Query: 61 GRQIHGHILKFGFGSYVFVGSP-----LVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTM 114
G + K + V P +VD+ + L+ A+ +E+P E + +++ T+
Sbjct: 737 GLSYFRSMSK----EHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTL 792
Query: 115 ITG 117
++
Sbjct: 793 LSA 795
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 269/643 (41%), Positives = 394/643 (61%), Gaps = 32/643 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D ++WN +I G A G +A +VYN M ++G+ ++IT+ +L + + G++I
Sbjct: 292 DLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMP-NKITYVILLNACVNSAALHWGKEI 350
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H + K GF S + V + L+ MY++ G I DA
Sbjct: 351 HSRVAKAGFTSDIGVQNALISMYSRCGSIKDA---------------------------- 382
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
R +F M KD ISWT MI GL ++G EA+ +++EM+ G+ ++ T+ S+L AC
Sbjct: 383 ---RLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNAC 439
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
ALE G++IH ++ + VG+ LV+MY C S+K A VF M +++V++
Sbjct: 440 SSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYN 499
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
AM+ GY + +EA+K+F +Q G++PD T +++++CAN SLE + H
Sbjct: 500 AMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKG 559
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G S +V NALV+ Y KCG+ D+ +F +M R+ +SW A++ G A+ G+ + + LF
Sbjct: 560 GFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLF 619
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
E+M G+KPD VT + +LSACS AGL+E+GR YF M +++ I P +HY CM+D+L R
Sbjct: 620 ERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGR 679
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG+L+EA++ I MPF + W LL +CRIHGNV + + AAES L+LD N YV L
Sbjct: 680 AGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVAL 739
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S +YA+ G WD ++LR+ M ++GV K+PG SWI+ ++H F A+D S P S++IYAEL
Sbjct: 740 SHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAEL 799
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
++L M +GYVPD SV+HDV+ EK + HHSE+LAIA+GL+ PPG I + KNL
Sbjct: 800 DRLTHAMKMKGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTPPGTRIHIFKNL 859
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RVC DCH ATK+ISKI REI+ RD RFH FK+G CSCGD+W
Sbjct: 860 RVCPDCHTATKFISKIVDREIIARDVNRFHHFKDGVCSCGDYW 902
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 140/452 (30%), Positives = 238/452 (52%), Gaps = 34/452 (7%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW + I G+A G A +++ M ++G+ +RIT+ ++L SS + G+ +H
Sbjct: 193 VSWTITIGGYADCGRSETAFEIFQKMEQEGVVP-NRITYISVLNAFSSPAALKWGKAVHS 251
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
IL G S VG+ LV MYAK G D ++ F++L ++++ +NTMI GL G E
Sbjct: 252 RILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWE- 310
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
EA +++ +M+ EG+ ++ T+ +L AC
Sbjct: 311 ------------------------------EASEVYNQMQREGVMPNKITYVILLNACVN 340
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
AL GK+IH+ + + ++ V +AL+ MY +C SIK A VF M K+V+SWTAM
Sbjct: 341 SAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAM 400
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ G ++G EA+ ++ MQ+ G+EP+ T S++++C++ A+LE G + H + + GL
Sbjct: 401 IGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGL 460
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ V N LV Y CG+++D+ ++F+ M RD V++ A++ GYA E + LF++
Sbjct: 461 ATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDR 520
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
+ GLKPD+VT I +L+AC+ +G +E R +V++ G ++ ++ G
Sbjct: 521 LQEEGLKPDKVTYINMLNACANSGSLEWARE-IHTLVRKGGFFSDTSVGNALVSTYAKCG 579
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+A KM + I W ++ HG
Sbjct: 580 SFSDASIVFEKMT-KRNVISWNAIIGGSAQHG 610
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 145/509 (28%), Positives = 256/509 (50%), Gaps = 41/509 (8%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
SWN ++ G+ +G + A+K+ M + GL R T + L S ++ GR+IH
Sbjct: 93 SWNAMVVGYIQYGYIEKALKLLRQMQQHGLAP-DRTTIMSFLSSCKSPGALEWGREIHFQ 151
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
++ G V V + +++MYAK G I EE+
Sbjct: 152 AMQAGLLFDVKVANCILNMYAKCGSI-------------------------------EEA 180
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
R +F M+ K +SWT I G G A ++F++M EG+ ++ T+ SVL A
Sbjct: 181 REVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSP 240
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
AL+ GK +H+ I+ H+ + VG+ALV MY KC S K VF + +++++W M+
Sbjct: 241 AALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMI 300
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
G + G EEA +++ MQR G+ P+ T ++++C N A+L G + H R G
Sbjct: 301 GGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFT 360
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
S I V NAL++ Y +CG+I+D+ +F++M +D +SWTA++ G AK G E + ++++M
Sbjct: 361 SDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEM 420
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
G++P+ VT +L+ACS +E GR + +V E G+ ++++ S G
Sbjct: 421 QQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVV-EAGLATDAHVGNTLVNMYSMCGS 479
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL--LELDPYNP--ASYVL 483
+++A+ ++M D + + ++ H +GK A + L+ + P +Y+
Sbjct: 480 VKDARQVFDRM-IQRDIVAYNAMIGGYAAH---NLGKEALKLFDRLQEEGLKPDKVTYIN 535
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKD 512
+ + A+ G + ++ +R+ G D
Sbjct: 536 MLNACANSGSLEWAREIHTLVRKGGFFSD 564
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 207/408 (50%), Gaps = 40/408 (9%)
Query: 51 MSSSRRCVDL-----GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP- 104
M +RC+++ GRQ+H HI++ + + L++MY + G I +A++ + +L
Sbjct: 27 MKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSY 86
Query: 105 -EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
E+ + +N M+ G ++ G +E +A+ L R
Sbjct: 87 MERTVHSWNAMVVGYIQYGYIE-------------------------------KALKLLR 115
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
+M+ GLA D+ T S L++C ALE G++IH ++ +V V + +++MY KC
Sbjct: 116 QMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCG 175
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
SI+ A VF M K+VVSWT + GY G SE A +IF M++ G+ P+ T SV++
Sbjct: 176 SIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLN 235
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+ ++ A+L+ G H R L G S V ALV Y KCG+ +D ++F ++ RD ++
Sbjct: 236 AFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIA 295
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
W ++ G A+ G E +++ +M G+ P+++T + +L+AC + + G+ +
Sbjct: 296 WNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVA 355
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
K G +I + SR G +++A+ +KM D I W ++
Sbjct: 356 KA-GFTSDIGVQNALISMYSRCGSIKDARLVFDKM-VRKDVISWTAMI 401
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 173/314 (55%), Gaps = 9/314 (2%)
Query: 158 AIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVD 217
A+D+ + ++ +G ++ + +L C + L G+Q+H II++ + + +AL++
Sbjct: 7 AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66
Query: 218 MYCKCKSIKYAESVFRTMAW--KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDD 275
MY +C SI+ A V++ +++ + V SW AM+VGY Q G E+A+K+ MQ++G+ PD
Sbjct: 67 MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126
Query: 276 FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNE 335
T+ S +SSC + +LE G + H +++ GL+ + V+N ++ Y KCG+IE++ +F++
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDK 186
Query: 336 MNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG 395
M + VSWT + GYA G++ ++F+KM G+ P+ +T I VL+A S ++ G
Sbjct: 187 MEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWG 246
Query: 396 RHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCR 455
+ ++ G T ++ + ++ G ++ + K+ D I W T+
Sbjct: 247 KAVHSRILNA-GHESDTAVGTALVKMYAKCGSYKDCRQVFEKL-VNRDLIAWNTM----- 299
Query: 456 IHGNVEIGKWAAES 469
I G E G W S
Sbjct: 300 IGGLAEGGYWEEAS 313
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 272/656 (41%), Positives = 416/656 (63%), Gaps = 12/656 (1%)
Query: 3 FHDGVSWN---LLISGHASHGSVNDAVKVY--NLMLKDGLGNLSRIT------FSTMLIM 51
FH ++ N +S H+ H + ++++ LK+ + L RI +ST++
Sbjct: 13 FHKNLNLNPKDTTLSHHSEHRRFEEIIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAA 72
Query: 52 SSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMY 111
R ++LG+++H H F + + + L+ MYAK G + DA+ FDE+P+K++ +
Sbjct: 73 CLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSW 132
Query: 112 NTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL-EGL 170
NTMI+G G +E++R+LF M +D+ SW +I+G + G EA+DLFR M+ E
Sbjct: 133 NTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESS 192
Query: 171 AMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAES 230
+ FT S L A + +L GK+IH ++IR+ + + V +AL+D+Y KC S+ A
Sbjct: 193 NCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARG 252
Query: 231 VFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS 290
+F MA K++VSWT M+ ++G +E +F ++ +G+ P+++T V+++CA+LA+
Sbjct: 253 IFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAA 312
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
+ G + HG G F ++ALV Y KCGN E + R+FN+M D VSWT+L+ G
Sbjct: 313 EQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVG 372
Query: 351 YAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP 410
YA+ G+ + + FE +L G KPDE+T +GVLSAC+ AGLV+ G YF + +++G+
Sbjct: 373 YAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVH 432
Query: 411 IHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL 470
DHY C+ID+L+R+GR +EA++ I+ MP PD WA+LL CRIHGN+E+ + AA++L
Sbjct: 433 TADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKAL 492
Query: 471 LELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSAD 530
EL+P NPA+Y+ LS+IYA+ G W +++R M +G+ K PG SWI+ K +VH+F
Sbjct: 493 FELEPENPATYITLSNIYANAGLWTEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVG 552
Query: 531 DWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLL 590
D S P I+ L +L++KM +EGYV D + VLHDVE +K + + +HSEKLA+AFG++
Sbjct: 553 DTSHPKISDIHEYLGELSKKMKEEGYVADTNFVLHDVEEEQKEQNIFYHSEKLAVAFGII 612
Query: 591 FIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDF 646
PG PI+V KNLR C DCHNA KYISKI QR+I+VRD+ RFH F +G CSC D+
Sbjct: 613 STSPGTPIKVFKNLRTCVDCHNAMKYISKIVQRKIIVRDSNRFHCFVDGSCSCKDY 668
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 184/352 (52%), Gaps = 33/352 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SWN +ISG+ S G +A+ ++ +M ++ N + T S+ L +++ +
Sbjct: 155 MPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRR 214
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G++IHG++++ G V + L+D+Y K G + +A+ FD++ +K+IV + TMI
Sbjct: 215 GKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMI----- 269
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
R F ++G ++E LFR++ G+ +++TF V
Sbjct: 270 -------HRCF-------------------EDGRKKEGFSLFRDLMGSGVRPNEYTFAGV 303
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L A + GK++H ++ R + F SALV +Y KC + + A VF M ++
Sbjct: 304 LNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDL 363
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
VSWT+++VGY QNG + A++ F ++ R+G +PD+ T V+S+C + ++ G + FH
Sbjct: 364 VSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHS 423
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
GL+ ++ + G +++ + + M ++ D+ W +L+ G
Sbjct: 424 VKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGG 475
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSW LI G+A +G + A++ + +L+ G ITF +L + VD+
Sbjct: 358 MPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGT-KPDEITFVGVLSACTHAGLVDI 416
Query: 61 GRQ-IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEK-NIVMYNTMITGL 118
G + H K G + ++D+ A+ G +A+ D +P K + ++ +++ G
Sbjct: 417 GLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGC 476
Query: 119 LRRGLVEESRRLFRG---MKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
G +E + R + ++ ++ ++ T+ GL E + +M G+
Sbjct: 477 RIHGNIELAERAAKALFELEPENPATYITLSNIYANAGLWTEETKVRNDMDNRGIVKKP- 535
Query: 176 TFGSVLTACGGLLALEEGKQIHAFII 201
G +E +Q+H F++
Sbjct: 536 ----------GKSWIEIKRQVHVFLV 551
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 260/603 (43%), Positives = 380/603 (63%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
FS +L S + LG+Q+H I+ G S F+ + L+++Y+K G + A F +P
Sbjct: 55 FSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMP 114
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
KNI+ N +I G R G +R++F M +++ +W M+ GL+Q E + LF
Sbjct: 115 RKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSR 174
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M G D+F GSVL C GL AL G+Q+H ++ + + N+ V S+L MY KC S
Sbjct: 175 MNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGS 234
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ E + R M +NVV+W ++ G QNG EE + + M+ G PD T SVISS
Sbjct: 235 LGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISS 294
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
C+ LA+L +G Q H + G ++V ++L++ Y +CG +E S ++F E D V W
Sbjct: 295 CSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCW 354
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
+++++ Y G+ E IDLF +M L+ ++VT + +L ACS GL EKG +F++MV+
Sbjct: 355 SSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVE 414
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
+YG++P +HYTCM+D+L R G +EEA++ I MP D I W TLLS+C+IH E+ +
Sbjct: 415 KYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMAR 474
Query: 465 WAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRV 524
+E + LDP +P YVLLS+I+AS +WD VS +R+ MR++ ++K+PG SW++ K+++
Sbjct: 475 RISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQI 534
Query: 525 HIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLA 584
H F D S P S +I + L +L +M K GYVPD+ SVLHD+++ +K L HHSEKLA
Sbjct: 535 HQFCMGDKSHPKSVEIASYLRELTSEMKKRGYVPDIDSVLHDMDVEDKEYSLVHHSEKLA 594
Query: 585 IAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCG 644
IAF LL+ P G PIRV+KNLRVCSDCH A KYIS+I+ REI+VRD+ RFH FKNG CSCG
Sbjct: 595 IAFALLYTPVGTPIRVIKNLRVCSDCHVAIKYISEISNREIIVRDSSRFHHFKNGRCSCG 654
Query: 645 DFW 647
D+W
Sbjct: 655 DYW 657
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 179/382 (46%), Gaps = 63/382 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLML--------------------KDGLGNL 40
MP + +S N+LI+G+ G A K+++ M ++GLG
Sbjct: 113 MPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLF 172
Query: 41 SRI----------TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKL 90
SR+ ++L + R + GRQ+HG++ K GF + V S L MY K
Sbjct: 173 SRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKC 232
Query: 91 GLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLM 150
G + + +R +P +N+V +NT+ I G
Sbjct: 233 GSLGEGERLIRAMPSQNVVAWNTL-------------------------------IAGRA 261
Query: 151 QNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVF 210
QNG E +D + M++ G D+ TF SV+++C L L +G+QIHA +I+ V
Sbjct: 262 QNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVS 321
Query: 211 VGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
V S+L+ MY +C ++Y+ VF +VV W++M+ YG +G EA+ +F M++
Sbjct: 322 VISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEK 381
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT-GLISFITVSNALVTFYGKCGNIEDS 329
+E +D T S++ +C++ E+G +F + G+ + +V G+ G++E++
Sbjct: 382 LEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEA 441
Query: 330 HRLFNEMNVR-DEVSWTALVSG 350
L M V+ D ++W L+S
Sbjct: 442 EALIRSMPVKADVITWKTLLSA 463
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 89/215 (41%), Gaps = 41/215 (19%)
Query: 272 EPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIE---- 327
EP F+ ++ SC + SL G Q H + +G S +SN L+ Y KCG ++
Sbjct: 51 EPSLFS--HLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAIT 108
Query: 328 ---------------------------DSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ ++F+EM R+ +W A+V+G +F E
Sbjct: 109 LFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEG 168
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK---EYGIRPIHDHYTC 417
+ LF +M G PDE L VL C+ + GR + K E+ + + +
Sbjct: 169 LGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVV----SS 224
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ + + G L E + I MP + + W TL++
Sbjct: 225 LAHMYMKCGSLGEGERLIRAMP-SQNVVAWNTLIA 258
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 273/683 (39%), Positives = 409/683 (59%), Gaps = 68/683 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + VSW +I +A H +N+A ++Y ML+ G+ + + +TF ++L ++ ++
Sbjct: 240 MKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGI-SPNAVTFVSLLNSCNTPEALNR 298
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR+IH HI ++RG E ++V+ N +IT +
Sbjct: 299 GRRIHSHI---------------------------SERGL----ETDVVVANALITMYCK 327
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLE-REAID----LFREMRLEGLAMDQF 175
++++R F M +D ISW+ MI G Q+G + +E++D L MR EG+ ++
Sbjct: 328 CNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKV 387
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
TF S+L AC ALE+G+QIHA I + + + + +A+ +MY KC SI AE VF M
Sbjct: 388 TFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKM 447
Query: 236 ------AW-------------------------KNVVSWTAMLVGYGQNGCSEEAVKIFC 264
AW +NVVSW M+ GY Q+G + ++
Sbjct: 448 ENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLS 507
Query: 265 NMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCG 324
+M+ G +PD T+ S++ +C L++LE G H ++ GL S V+ +L+ Y KCG
Sbjct: 508 SMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCG 567
Query: 325 NIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
+ ++ +F++++ RD V+W A+++GY + G E +DLF++ML + P+E+T V+S
Sbjct: 568 EVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVIS 627
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDA 444
AC RAGLV++GR F IM +++ ++P HY CM+D+L RAGRL+EA+ FI +MP PD
Sbjct: 628 ACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDI 687
Query: 445 IGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTM 504
W LL +C+ H NV++ +WAA +L L+P N + YV LS+IYA G+WD +++R+ M
Sbjct: 688 SVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVM 747
Query: 505 REKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVL 564
+KG++KD G S I+ R+H F A+D + P D I+AELE L ++M + GY PDM VL
Sbjct: 748 DDKGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEAGYTPDMRFVL 807
Query: 565 HDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQRE 624
HDV+ +K + L HHSEKLAIA+GLL PPG PIR++KNLRVC DCH ATK+ISKI +RE
Sbjct: 808 HDVDEVQKERALCHHSEKLAIAYGLLKTPPGTPIRIMKNLRVCGDCHTATKFISKIRKRE 867
Query: 625 ILVRDAVRFHLFKNGECSCGDFW 647
I+ RDA RFH FKNG CSCGDFW
Sbjct: 868 IVARDANRFHYFKNGTCSCGDFW 890
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 151/553 (27%), Positives = 261/553 (47%), Gaps = 76/553 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D V+W+ +I+ +A + A + M KD +RITF ++L ++ ++
Sbjct: 139 MTLRDVVTWSSMIAAYAGNNHPAKAFDTFERM-KDANIEPNRITFLSILKACNNYSMLEK 197
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
R+IH + G + V V + L+ MY+K G I A F ++ E+N+V
Sbjct: 198 AREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVV----------- 246
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SWT +I Q+ EA +L+ +M G++ + TF S+
Sbjct: 247 --------------------SWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSL 286
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L +C AL G++IH+ I + +V V +AL+ MYCKC I+ A F M+ ++V
Sbjct: 287 LNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDV 346
Query: 241 VSWTAMLVGYGQNGCS-----EEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
+SW+AM+ GY Q+G +E ++ M+R G+ P+ T S++ +C+ +LE+G
Sbjct: 347 ISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGR 406
Query: 296 QFHG----------RSLVTGLIS--------------FITVSN-------ALVTFYGKCG 324
Q H RSL T + + F + N +L+T Y KCG
Sbjct: 407 QIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCG 466
Query: 325 NIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
++ + ++F+EM+ R+ VSW +++GYA+ G + +L M G +PD VT+I +L
Sbjct: 467 DLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILE 526
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDA 444
AC +E+G+ VK G+ T +I + S+ G + EA++ +K+ D
Sbjct: 527 ACGALSALERGKLVHAEAVK-LGLESDTVVATSLIGMYSKCGEVTEARTVFDKIS-NRDT 584
Query: 445 IGWATLLSSCRIHGNVEIGKWAAESLLE-LDPYNPASYVLLSSIYASKGKWDHVSQLRRT 503
+ W +L+ HG IG A + L P + + +++ ++ G+ V + R
Sbjct: 585 VAWNAMLAGYGQHG---IGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREI 641
Query: 504 MR--EKGVRKDPG 514
R ++ R PG
Sbjct: 642 FRIMQEDFRMKPG 654
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 134/499 (26%), Positives = 250/499 (50%), Gaps = 44/499 (8%)
Query: 20 GSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFV 79
G + +A+++ ++ + GL ++ T+ ++ + R + G+ +H + + G +++
Sbjct: 57 GRLKEAIQLLGIIKQRGL-LVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYL 115
Query: 80 GSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDS 139
G+ L++ Y+K G + ++ +FR M +D
Sbjct: 116 GNSLINFYSKFGDVASVEQ-------------------------------VFRRMTLRDV 144
Query: 140 ISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAF 199
++W++MI N +A D F M+ + ++ TF S+L AC LE+ ++IH
Sbjct: 145 VTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTV 204
Query: 200 IIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEA 259
+ + + +V V +AL+ MY KC I A +F+ M +NVVSWTA++ Q+ EA
Sbjct: 205 VKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEA 264
Query: 260 VKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTF 319
+++ M + GI P+ T S+++SC +L G + H GL + + V+NAL+T
Sbjct: 265 FELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITM 324
Query: 320 YGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG-----KANETIDLFEKMLSHGLKP 374
Y KC I+D+ F+ M+ RD +SW+A+++GYA+ G +E L E+M G+ P
Sbjct: 325 YCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFP 384
Query: 375 DEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSF 434
++VT + +L ACS G +E+GR + + G T + ++ ++ G + EA+
Sbjct: 385 NKVTFMSILKACSVHGALEQGRQ-IHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQV 443
Query: 435 INKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL-ELDPYNPASYVLLSSIYASKGK 493
+KM + + WA+LL+ G++ +AE + E+ N S+ L+ + YA G
Sbjct: 444 FSKME-NKNVVAWASLLTMYIKCGDLT----SAEKVFSEMSTRNVVSWNLMIAGYAQSGD 498
Query: 494 WDHVSQLRRTMREKGVRKD 512
V +L +M+ +G + D
Sbjct: 499 IAKVFELLSSMKVEGFQPD 517
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 170/325 (52%), Gaps = 7/325 (2%)
Query: 149 LMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDN 208
L + G +EAI L ++ GL ++ T+G ++ C L E+GK +H + +
Sbjct: 53 LCKAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAID 112
Query: 209 VFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR 268
+++G++L++ Y K + E VFR M ++VV+W++M+ Y N +A F M+
Sbjct: 113 IYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKD 172
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIED 328
IEP+ T S++ +C N + LE+ + H +G+ + + V+ AL+T Y KCG I
Sbjct: 173 ANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISL 232
Query: 329 SHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
+ +F +M R+ VSWTA++ A+ K NE +L+EKML G+ P+ VT + +L++C+
Sbjct: 233 ACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNT 292
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
+ +GR + E G+ +I + + +++A+ ++M D I W+
Sbjct: 293 PEALNRGRRIHS-HISERGLETDVVVANALITMYCKCNCIQDARETFDRMS-KRDVISWS 350
Query: 449 TLLSSCRIHGNVEIGKWAAESLLEL 473
+++ G + G ESL E+
Sbjct: 351 AMIA-----GYAQSGYQDKESLDEV 370
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 276/647 (42%), Positives = 387/647 (59%), Gaps = 32/647 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSW L +A G +++K Y+ ML++ + SRIT+ +L S ++
Sbjct: 190 MASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERV-RPSRITYMNVLSACGSLAALEK 248
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIH HI++ + S V V + L MY K G DA
Sbjct: 249 GKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDA------------------------ 284
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
R +F + +D I+W TMI G + +G EA F M EG+A D+ T+ +V
Sbjct: 285 -------REVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTV 337
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+AC L GK+IHA ++ +V G+AL++MY K S+K A VF M ++V
Sbjct: 338 LSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDV 397
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWT +L Y E+ F M + G++ + T V+ +C+N +L+ G + H
Sbjct: 398 VSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAE 457
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ GL++ + V+NAL++ Y KCG++ED+ R+F M++RD V+W L+ G + G+ E
Sbjct: 458 VVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEA 517
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ +E M S G++P+ T + VLSAC LVE+GR F M K+YGI P HY CM+D
Sbjct: 518 LQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVD 577
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
IL+RAG L EA+ I +P P A W LL++CRIH NVEIG+ AAE L+L+P N
Sbjct: 578 ILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGL 637
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YV LS+IYA+ G W V++LR+ M+E+GV+K+PG SWI+ VH F A D S P + +I
Sbjct: 638 YVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEI 697
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
YAELE L ++M GYVPD V+HD++ K + + HHSEKLAIA+GL+ PPG PIR+
Sbjct: 698 YAELETLKKQMKSLGYVPDTRFVMHDLDDEGKERAVCHHSEKLAIAYGLISTPPGTPIRI 757
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC+DCH ATK+ISKIT+REI+ RDA RFH FKNGECSCGD+W
Sbjct: 758 SKNLRVCTDCHTATKFISKITKREIIARDAHRFHHFKNGECSCGDYW 804
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 142/445 (31%), Positives = 234/445 (52%), Gaps = 34/445 (7%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSWN++ISG+A G +A ++ LM ++ L + TF ++L SS ++ GR+IH
Sbjct: 95 VSWNVMISGYAHRGLAQEAFNLFTLMQQERL-EPDKFTFVSILSACSSPAVLNWGREIHV 153
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+++ G + VG+ L+ MYAK G + DA
Sbjct: 154 RVMEAGLANDTTVGNALISMYAKCGSVRDA------------------------------ 183
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
RR+F M +D +SWTT+ ++G E++ + M E + + T+ +VL+ACG
Sbjct: 184 -RRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGS 242
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L ALE+GKQIHA I+ +++ +V V +AL MY KC + K A VF +++++V++W M
Sbjct: 243 LAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTM 302
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ G+ +G EEA F M G+ PD T +V+S+CA L G + H R+ GL
Sbjct: 303 IRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGL 362
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+S + NAL+ Y K G+++D+ ++F+ M RD VSWT L+ YA + E+ F++
Sbjct: 363 VSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQ 422
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
ML G+K +++T + VL ACS ++ G+ +VK G+ ++ + + G
Sbjct: 423 MLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKA-GLLADLAVTNALMSMYFKCG 481
Query: 427 RLEEAKSFINKMPFPPDAIGWATLL 451
+E+A M D + W TL+
Sbjct: 482 SVEDAIRVFEGMSM-RDVVTWNTLI 505
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 129/410 (31%), Positives = 213/410 (51%), Gaps = 35/410 (8%)
Query: 44 TFSTMLIMSSSRRCVDL--GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFD 101
++ + ++ S + DL G+Q+H HIL+ G V++ + L+ +YA G
Sbjct: 28 SYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGS--------- 78
Query: 102 ELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDL 161
V E+R+LF +K +SW MI+G GL +EA +L
Sbjct: 79 ----------------------VNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNL 116
Query: 162 FREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK 221
F M+ E L D+FTF S+L+AC L G++IH ++ ++ VG+AL+ MY K
Sbjct: 117 FTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAK 176
Query: 222 CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
C S++ A VF MA ++ VSWT + Y ++G EE++K + M + + P T +V
Sbjct: 177 CGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNV 236
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE 341
+S+C +LA+LE+G Q H + + S + VS AL Y KCG +D+ +F ++ RD
Sbjct: 237 LSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDV 296
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEI 401
++W ++ G+ G+ E F +ML G+ PD T VLSAC+R G + +G+
Sbjct: 297 IAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHAR 356
Query: 402 MVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
K+ G+ +I++ S+AG +++A+ ++MP D + W TLL
Sbjct: 357 AAKD-GLVSDVRFGNALINMYSKAGSMKDARQVFDRMP-KRDVVSWTTLL 404
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 172/338 (50%), Gaps = 33/338 (9%)
Query: 160 DLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMY 219
D+ + + +G +D + + +L +C L GKQ+H I+R K NV++ + L+ +Y
Sbjct: 14 DVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLY 73
Query: 220 CKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLG 279
C S+ A +F + K+VVSW M+ GY G ++EA +F MQ+ +EPD FT
Sbjct: 74 AHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFV 133
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
S++S+C++ A L G + H R + GL + TV NAL++ Y KCG++ D+ R+F+ M R
Sbjct: 134 SILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASR 193
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH-Y 398
DEVSWT L YA+ G E++ + ML ++P +T + VLSAC +EKG+ +
Sbjct: 194 DEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIH 253
Query: 399 FEIMVKEY------------------GIRPIHDHYTC-----------MIDILSRAGRLE 429
I+ EY + + + C MI +G+LE
Sbjct: 254 AHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLE 313
Query: 430 EAKSFINKM---PFPPDAIGWATLLSSCRIHGNVEIGK 464
EA ++M PD + T+LS+C G + GK
Sbjct: 314 EAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGK 351
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 274/683 (40%), Positives = 404/683 (59%), Gaps = 68/683 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + VSW +I +A H +N+A ++Y ML+ G+ + + +TF ++L ++ ++
Sbjct: 218 MTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGI-SPNAVTFVSLLNSCNTPEALNR 276
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR+IH HI + G + + V + L+ MY K
Sbjct: 277 GRRIHSHISERGLETDMIVANALITMYCKCNS---------------------------- 308
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGL-EREAID----LFREMRLEGLAMDQF 175
V+E+R +F M +D ISW+ MI G Q+G ++E+ID L MR EG+ ++
Sbjct: 309 ---VQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKV 365
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
TF S+L AC ALE+G+QIHA + + + + + +A+ +MY KC SI AE VF M
Sbjct: 366 TFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKM 425
Query: 236 AWKNVVSWTA-------------------------------MLVGYGQNGCSEEAVKIFC 264
A KNVV+WT+ M+ GY QNG + ++
Sbjct: 426 ANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLS 485
Query: 265 NMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCG 324
+M+ G +PD T+ +++ +C LA LE G H ++ GL S V+ +L+ Y KCG
Sbjct: 486 SMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCG 545
Query: 325 NIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
+ ++ +F++M+ RD V+W A+++GY + G E +DLF++ML + P+E+TL V+S
Sbjct: 546 QVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVIS 605
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDA 444
ACSRAGLV++GR F +M +++ + P HY CM+D+L RAGRL+EA+ FI MP PD
Sbjct: 606 ACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDI 665
Query: 445 IGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTM 504
W LL +C+ H NV++ + AA +LEL+P + Y+ LS+IYA G+WD +++RR M
Sbjct: 666 SVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVM 725
Query: 505 REKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVL 564
++G++KD G S I+ R+H F A+D + P D I+AELE L ++M + GY PDM VL
Sbjct: 726 DDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPDMRFVL 785
Query: 565 HDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQRE 624
HDV+ +K K L HHSEKLAIA+GLL P G PIR++KNLRVC DCH ATK+ISKI +RE
Sbjct: 786 HDVDDVQKEKALCHHSEKLAIAYGLLKTPSGTPIRIMKNLRVCGDCHTATKFISKIRKRE 845
Query: 625 ILVRDAVRFHLFKNGECSCGDFW 647
I+ RDA RFH F NG CSCGDFW
Sbjct: 846 IVARDANRFHYFNNGTCSCGDFW 868
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 137/495 (27%), Positives = 240/495 (48%), Gaps = 70/495 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D V+W+ +I+ +A + A + M D +RITF ++L ++ ++
Sbjct: 117 MTLRDVVTWSSMIAAYAGNNHPAKAFDTFERM-TDANIEPNRITFLSILKACNNYSILEK 175
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR+IH + G + V V + L+ MY+K G I A F ++ E+N+V
Sbjct: 176 GRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVV----------- 224
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SWT +I Q+ EA +L+ +M G++ + TF S+
Sbjct: 225 --------------------SWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSL 264
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L +C AL G++IH+ I + ++ V +AL+ MYCKC S++ A +F M+ ++V
Sbjct: 265 LNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDV 324
Query: 241 VSWTAMLVGYGQNGCS-----EEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
+SW+AM+ GY Q+G +E ++ M+R G+ P+ T S++ +C +LE+G
Sbjct: 325 ISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGR 384
Query: 296 QFHG----------RSLVTGLIS--------------FITVSN-------ALVTFYGKCG 324
Q H RSL T + + F ++N + ++ Y KCG
Sbjct: 385 QIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCG 444
Query: 325 NIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
++ + ++F+EM R+ VSW +++GYA+ G + +L M + G +PD VT+I +L
Sbjct: 445 DLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILE 504
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDA 444
AC +E+G+ VK G+ T +I + S+ G++ EA++ +KM D
Sbjct: 505 ACGALAGLERGKLVHAEAVK-LGLESDTVVATSLIGMYSKCGQVAEARTVFDKMS-NRDT 562
Query: 445 IGWATLLSSCRIHGN 459
+ W +L+ HG+
Sbjct: 563 VAWNAMLAGYGQHGD 577
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/499 (27%), Positives = 253/499 (50%), Gaps = 44/499 (8%)
Query: 20 GSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFV 79
G + +A+++ ++ + GL ++ T+ ++ + R + G+ +H + + G +++
Sbjct: 35 GRLREAIQLLGIIKQRGLL-VNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYL 93
Query: 80 GSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDS 139
G+ L++ Y+K F++ V + ++FR M +D
Sbjct: 94 GNSLINFYSK----------FED---------------------VASAEQVFRRMTLRDV 122
Query: 140 ISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAF 199
++W++MI N +A D F M + ++ TF S+L AC LE+G++IH
Sbjct: 123 VTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTI 182
Query: 200 IIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEA 259
+ + +V V +AL+ MY KC I A VF M +NVVSWTA++ Q+ EA
Sbjct: 183 VKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEA 242
Query: 260 VKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTF 319
+++ M + GI P+ T S+++SC +L G + H GL + + V+NAL+T
Sbjct: 243 FELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITM 302
Query: 320 YGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG-KANETID----LFEKMLSHGLKP 374
Y KC +++++ +F+ M+ RD +SW+A+++GYA+ G K E+ID L E+M G+ P
Sbjct: 303 YCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFP 362
Query: 375 DEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSF 434
++VT + +L AC+ G +E+GR + K G T + ++ ++ G + EA+
Sbjct: 363 NKVTFMSILRACTAHGALEQGRQIHAELSK-VGFELDRSLQTAIFNMYAKCGSIYEAEQV 421
Query: 435 INKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL-ELDPYNPASYVLLSSIYASKGK 493
+KM + + W + LS G++ +AE + E+ N S+ L+ + YA G
Sbjct: 422 FSKMA-NKNVVAWTSFLSMYIKCGDLS----SAEKVFSEMPTRNVVSWNLMIAGYAQNGD 476
Query: 494 WDHVSQLRRTMREKGVRKD 512
V +L +M+ +G + D
Sbjct: 477 IVKVFELLSSMKAEGFQPD 495
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 164/304 (53%), Gaps = 2/304 (0%)
Query: 149 LMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDN 208
L + G REAI L ++ GL ++ T+G V+ C E+GK +H + + +
Sbjct: 31 LCKAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEID 90
Query: 209 VFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR 268
+++G++L++ Y K + + AE VFR M ++VV+W++M+ Y N +A F M
Sbjct: 91 IYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTD 150
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIED 328
IEP+ T S++ +C N + LE+G + H G+ + + V+ AL+T Y KCG I
Sbjct: 151 ANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISV 210
Query: 329 SHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
+ +F++M R+ VSWTA++ A+ K NE +L+E+ML G+ P+ VT + +L++C+
Sbjct: 211 ACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNT 270
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
+ +GR + E G+ +I + + ++EA+ ++M D I W+
Sbjct: 271 PEALNRGRRIHS-HISERGLETDMIVANALITMYCKCNSVQEAREIFDRMS-KRDVISWS 328
Query: 449 TLLS 452
+++
Sbjct: 329 AMIA 332
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 267/644 (41%), Positives = 400/644 (62%), Gaps = 33/644 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V +N LI+ A HG +A + Y M DG+ L+R T+ ++L S+ + ++ G+ I
Sbjct: 294 DVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVA-LNRTTYLSILNACSTSKALEAGKLI 352
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H HI + G S V +G+ L+ MYA+ G +LP+
Sbjct: 353 HSHISEDGHSSDVQIGNALISMYARCG----------DLPK------------------- 383
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+R LF M +D ISW +I G + EA+ L+++M+ EG+ + TF +L+AC
Sbjct: 384 --ARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSAC 441
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
A +GK IH I+R+ K N + +AL++MY +C S+ A++VF ++V+SW
Sbjct: 442 ANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWN 501
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
+M+ G+ Q+G E A K+F MQ +EPD+ T SV+S C N +LE G Q HGR +
Sbjct: 502 SMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITES 561
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
GL + + NAL+ Y +CG+++D+ +F+ + RD +SWTA++ G A G+ + I+LF
Sbjct: 562 GLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELF 621
Query: 365 EKMLSHGLKP-DEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
+M + G +P D T +LSAC+ AGLV +G F M EYG+ P +HY C++ +L
Sbjct: 622 WQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLG 681
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
RA R +EA++ IN+MPFPPDA W TLL +CRIHGN+ + + AA + L+L+ NPA Y+L
Sbjct: 682 RARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYIL 741
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LS++YA+ G+WD V+++RR M +G+RK+PG SWI+ + +H F A D S P + +IYAE
Sbjct: 742 LSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAE 801
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
L++L+ +M + GY PD VLHD+ + + L HSE+LAIA+GL+ PPG PIR+ KN
Sbjct: 802 LKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKN 861
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LR+C DCH A+K+ISK+ REI+ RD+ RFH FKNG+CSC D+W
Sbjct: 862 LRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 905
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 236/454 (51%), Gaps = 34/454 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VS+N ++ +A V + + ++ M +G+ + ++T+ +L ++ +D G++I
Sbjct: 193 DVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGI-SPDKVTYINLLDAFTTPSMLDEGKRI 251
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H ++ G S + VG+ LV M +R G V
Sbjct: 252 HKLTVEEGLNSDIRVGTALVTM-------------------------------CVRCGDV 280
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ +++ F+G+ D+D + + +I L Q+G EA + + MR +G+A+++ T+ S+L AC
Sbjct: 281 DSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNAC 340
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
ALE GK IH+ I + H +V +G+AL+ MY +C + A +F TM ++++SW
Sbjct: 341 STSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWN 400
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
A++ GY + EA++++ MQ G++P T ++S+CAN ++ +G H L +
Sbjct: 401 AIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS 460
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G+ S ++NAL+ Y +CG++ ++ +F RD +SW ++++G+A+ G LF
Sbjct: 461 GIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLF 520
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
++M + L+PD +T VLS C +E G+ + E G++ + +I++ R
Sbjct: 521 QEMQNEELEPDNITFASVLSGCKNPEALELGKQ-IHGRITESGLQLDVNLGNALINMYIR 579
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
G L++A++ + + D + W ++ C G
Sbjct: 580 CGSLQDARNVFHSLQH-RDVMSWTAMIGGCADQG 612
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 133/479 (27%), Positives = 239/479 (49%), Gaps = 36/479 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D +SWN LIS +A G A +++ M G ++IT+ ++L S ++
Sbjct: 88 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIP-NKITYISILTACYSPAELEN 146
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G++IH I+K G+ V + L+ MY K G + A++ F + +++V YNTM+ GL
Sbjct: 147 GKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTML-GL-- 203
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
Q +E + LF +M EG++ D+ T+ ++
Sbjct: 204 ----------------------------YAQKAYVKECLGLFGQMSSEGISPDKVTYINL 235
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A L+EGK+IH + ++ VG+ALV M +C + A+ F+ +A ++V
Sbjct: 236 LDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDV 295
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V + A++ Q+G + EA + + M+ +G+ + T S++++C+ +LE G H
Sbjct: 296 VVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSH 355
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
G S + + NAL++ Y +CG++ + LF M RD +SW A+++GYA+ E
Sbjct: 356 ISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEA 415
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ L+++M S G+KP VT + +LSAC+ + G+ E +++ GI+ +++
Sbjct: 416 MRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS-GIKSNGHLANALMN 474
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL--ELDPYN 477
+ R G L EA++ D I W ++++ HG+ E + + EL+P N
Sbjct: 475 MYRRCGSLMEAQNVFEGTQ-ARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDN 532
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 203/411 (49%), Gaps = 33/411 (8%)
Query: 42 RITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFD 101
R T+ +L + +R + ++IH +++ G G +F+ + L++MY K + DA + F
Sbjct: 27 RATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFK 86
Query: 102 ELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDL 161
E+P + D ISW ++I+ Q G +++A L
Sbjct: 87 EMPRR-------------------------------DVISWNSLISCYAQQGFKKKAFQL 115
Query: 162 FREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK 221
F EM+ G ++ T+ S+LTAC LE GK+IH+ II+ ++ + V ++L+ MY K
Sbjct: 116 FEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGK 175
Query: 222 CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
C + A VF ++ ++VVS+ ML Y Q +E + +F M GI PD T ++
Sbjct: 176 CGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINL 235
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE 341
+ + + L+EG + H ++ GL S I V ALVT +CG+++ + + F + RD
Sbjct: 236 LDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDV 295
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEI 401
V + AL++ A+ G E + + +M S G+ + T + +L+ACS + +E G+
Sbjct: 296 VVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGK-LIHS 354
Query: 402 MVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ E G +I + +R G L +A+ MP D I W +++
Sbjct: 355 HISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMP-KRDLISWNAIIA 404
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 161/290 (55%), Gaps = 3/290 (1%)
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
D+ T+ ++L C L E K+IHA ++ ++F+ + L++MY KC+S+ A VF
Sbjct: 26 DRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVF 85
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
+ M ++V+SW +++ Y Q G ++A ++F MQ G P+ T S++++C + A LE
Sbjct: 86 KEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELE 145
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
G + H + + G V N+L++ YGKCG++ + ++F ++ RD VS+ ++ YA
Sbjct: 146 NGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYA 205
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
+ E + LF +M S G+ PD+VT I +L A + ++++G+ ++ V+E G+
Sbjct: 206 QKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEE-GLNSDI 264
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG-NVE 461
T ++ + R G ++ AK + D + + L+++ HG NVE
Sbjct: 265 RVGTALVTMCVRCGDVDSAKQAFKGIA-DRDVVVYNALIAALAQHGHNVE 313
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 120/260 (46%), Gaps = 5/260 (1%)
Query: 255 CSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSN 314
C + + Q E D T +++ +C L E + H + + G+ I +SN
Sbjct: 7 CGPDREDVSNTHQPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSN 66
Query: 315 ALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKP 374
L+ Y KC ++ D+H++F EM RD +SW +L+S YA+ G + LFE+M + G P
Sbjct: 67 LLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIP 126
Query: 375 DEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSF 434
+++T I +L+AC +E G+ ++K G + ++ + + G L A+
Sbjct: 127 NKITYISILTACYSPAELENGKKIHSQIIKA-GYQRDPRVQNSLLSMYGKCGDLPRARQV 185
Query: 435 INKMPFPPDAIGWATLLSSCRIHGNVE--IGKWAAESLLELDPYNPASYVLLSSIYASKG 492
+ P D + + T+L V+ +G + S + P + +Y+ L + +
Sbjct: 186 FAGIS-PRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISP-DKVTYINLLDAFTTPS 243
Query: 493 KWDHVSQLRRTMREKGVRKD 512
D ++ + E+G+ D
Sbjct: 244 MLDEGKRIHKLTVEEGLNSD 263
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 266/682 (39%), Positives = 419/682 (61%), Gaps = 36/682 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSW +++ G G +A+K++ M+ DGL ++ T + +L ++ +
Sbjct: 122 MPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLSP-TQFTLTNVLSSCAATEARGV 180
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR++H ++K G S V V + +++MY K G A+ F+ +PE+++ +N M++
Sbjct: 181 GRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAH 240
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLF-REMRLEGLAMDQFTFGS 179
G ++ + LF M D+ +SW +I G QNGL +A+ F R + +A D+FT S
Sbjct: 241 LGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITS 300
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI-------------- 225
VL+AC L + GKQ+HA+I+R+ V +AL+ MY K S+
Sbjct: 301 VLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMAD 360
Query: 226 -------------------KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM 266
K+A +F M+ ++VV+WTAM+VGY QNG ++EA+++F M
Sbjct: 361 LNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLM 420
Query: 267 QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
R+G EP+ +T+ +V+S CA+LA LE G Q H +++ + +VSN++VT Y + G++
Sbjct: 421 IRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSL 480
Query: 327 EDSHRLFNEMNVRDE-VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+ R+F+ ++ R E V+WT+++ A+ G + + LFE+ML G+KPD +T +GVLSA
Sbjct: 481 PWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSA 540
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
C+ G V++G+ YF+ + ++GI P HY CM+D+L+RAG EA+ FI +MP PDAI
Sbjct: 541 CTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAI 600
Query: 446 GWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
W +LLS+CR+H N ++ + AAE LL +DP N +Y LS++Y++ G+W+ +++ + +
Sbjct: 601 AWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRK 660
Query: 506 EKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLH 565
+K V+K+ G SW +RVH+F ADD P D +Y K+ + K G+VPD+ SVLH
Sbjct: 661 DKSVKKETGFSWTHIGNRVHVFGADDVLHPQRDTVYRTAAKMWDDIKKAGFVPDLQSVLH 720
Query: 566 DVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREI 625
DV+ K +ML+ HSEKLAIAFGL+ P +R++KNLRVC+DCH A K+ISK+ REI
Sbjct: 721 DVDDELKEEMLSRHSEKLAIAFGLVSTPEKTTLRIMKNLRVCNDCHTAIKFISKVADREI 780
Query: 626 LVRDAVRFHLFKNGECSCGDFW 647
++RDA RFH FK+G CSC D+W
Sbjct: 781 ILRDATRFHHFKDGFCSCKDYW 802
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 127/474 (26%), Positives = 236/474 (49%), Gaps = 81/474 (17%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGL-----IYDAKRGFDELP--EKNIVMYNT 113
GR IH +K G + ++ + L+ YA +A+R FDE+P ++N+ +N+
Sbjct: 42 GRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFDEIPAAQRNVFTWNS 101
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
+++ + G + ++R +F M ++D +SWT M+ GL + G EAI +F +M +GL+
Sbjct: 102 LLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLSPT 161
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
QFT +VL++C A G+++H+F+++ V V +++++MY KC + A +VF
Sbjct: 162 QFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVFE 221
Query: 234 TM------AW-------------------------KNVVSWTAMLVGYGQNGCSEEAVKI 262
M +W + +VSW A++ GY QNG + +A+
Sbjct: 222 RMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWF 281
Query: 263 FCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYG 321
F M + + PD+FT+ SV+S+CANL + G Q H L + + V+NAL++ Y
Sbjct: 282 FSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYA 341
Query: 322 KCGNIED---------------------------------SHRLFNEMNVRDEVSWTALV 348
K G++E+ + +F+ M+ RD V+WTA++
Sbjct: 342 KSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMI 401
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
GY + G +E ++LF M+ G +P+ T+ VLS C+ +E G+ +I K I
Sbjct: 402 VGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGK---QIHCK--AI 456
Query: 409 RPIHDHYT----CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
R + + + ++ + +R+G L A+ +++ + + + W +++ + HG
Sbjct: 457 RSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHG 510
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 160/338 (47%), Gaps = 41/338 (12%)
Query: 206 KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCN 265
+ NVF ++L+ +Y K + A +VF M ++ VSWT M+VG + G EA+K+F +
Sbjct: 93 QRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLD 152
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M +G+ P FTL +V+SSCA + G + H + GL S + V+N+++ YGKCG+
Sbjct: 153 MVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGD 212
Query: 326 IE-----------------------DSH--------RLFNEMNVRDEVSWTALVSGYAKF 354
E D+H LF M R VSW A+++GY +
Sbjct: 213 AETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQN 272
Query: 355 GKANETIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
G + + F +MLS+ + PDE T+ VLSAC+ G+V G+ +++ + I
Sbjct: 273 GLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSR-MPYIGQ 331
Query: 414 HYTCMIDILSRAGRLEEAKSFINKMPFPP-DAIGWATLLSSCRIHGNVEIG--KWAAESL 470
+I + +++G +E A+ + + + I + LL G V++G K A E
Sbjct: 332 VTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALL-----EGYVKLGDMKHAREMF 386
Query: 471 LELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
+ + ++ + Y G D +L R M G
Sbjct: 387 DVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSG 424
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 39/197 (19%)
Query: 281 VISSCANLASLEEGTQFHGRSLVTGLISF------------------------------- 309
++ C A+ G H R++ GL++
Sbjct: 29 LLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFDE 88
Query: 310 -------ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
+ N+L++ Y K G + D+ +F EM RD VSWT +V G + G+ E I
Sbjct: 89 IPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIK 148
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL 422
+F M++ GL P + TL VLS+C+ GR +VK G+ ++++
Sbjct: 149 MFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVK-LGLSSCVPVANSVLNMY 207
Query: 423 SRAGRLEEAKSFINKMP 439
+ G E A++ +MP
Sbjct: 208 GKCGDAETARAVFERMP 224
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 271/648 (41%), Positives = 411/648 (63%), Gaps = 36/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + VSWN +I+G ++G +A +++ M +G+ L++ F+T++ + ++ + +
Sbjct: 254 MENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGV-KLTQTIFATVIKLCANIKEMSF 312
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+Q+H ++K G + + + L+ Y+K I DA + F M+ G+
Sbjct: 313 AKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLF------------CMMHGV-- 358
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
++ +SWT +I+G +QNG A++LF +MR EG+ + FT+ ++
Sbjct: 359 ----------------QNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTI 402
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LTA + QIHA +++ +++++ VG+AL D Y K A +F + K++
Sbjct: 403 LTANAAV----SPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDI 458
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN-LASLEEGTQFHG 299
V+W+AML GY Q G E AVKIF + + G+EP++FT SV+++CA AS+E+G QFH
Sbjct: 459 VAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHS 518
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
S+ +G + + VS+ALVT Y K GNIE ++ +F RD VSW +++SGYA+ G +
Sbjct: 519 CSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKK 578
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
++ +FE+M S L+ D +T IGV+SAC+ AGLV +G+ YF++MVK+Y I P +HY+CM+
Sbjct: 579 SLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMV 638
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+ SRAG LE+A INKMPFP A W TLL++CR+H NV++G+ AAE L+ L P + A
Sbjct: 639 DLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSA 698
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+YVLLS+IYA+ G W +++R+ M K V+K+ G SWI+ K++ F A D S P SD+
Sbjct: 699 AYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDR 758
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY +LE+L+ ++ GY PD VLHDVE K +L+ HSE+LAIAFGL+ PPG PI+
Sbjct: 759 IYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQ 818
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+VKNLRVC DCH K ISKI R+I+VRD+ RFH FK G CSCGD+W
Sbjct: 819 IVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 866
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 132/460 (28%), Positives = 244/460 (53%), Gaps = 40/460 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + VSW L++G+ +G A+K+++ M +G+ + TF+ +L ++ V+
Sbjct: 153 MRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGI-KPNPFTFAAVLGGLAADGAVEK 211
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+H ++K G S +FVG+ +V+MY+K ++ DAK
Sbjct: 212 GVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKA---------------------- 249
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+F M++++++SW +MI G + NGL+ EA +LF MRLEG+ + Q F +V
Sbjct: 250 ---------VFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATV 300
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM-AWKN 239
+ C + + KQ+H +I+N ++ + +AL+ Y KC I A +F M +N
Sbjct: 301 IKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQN 360
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VVSWTA++ GY QNG ++ A+ +FC M+R G+ P+ FT +++++ A ++ +Q H
Sbjct: 361 VVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSP----SQIHA 416
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ T + +V AL Y K G+ ++ ++F ++ +D V+W+A++SGYA+ G
Sbjct: 417 LVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEG 476
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSR-AGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
+ +F ++ G++P+E T VL+AC+ VE+G+ + +K G + +
Sbjct: 477 AVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKS-GFSNALCVSSAL 535
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ + ++ G +E A + K D + W +++S HG
Sbjct: 536 VTMYAKRGNIESANE-VFKRQVDRDLVSWNSMISGYAQHG 574
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 124/403 (30%), Positives = 208/403 (51%), Gaps = 38/403 (9%)
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+G+Q+H +K GF V VG+ LVDMY K + D +R FDE
Sbjct: 110 VGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDE----------------- 152
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
M+ K+ +SWT+++ G QNGL +A+ LF +M+LEG+ + FTF +
Sbjct: 153 --------------MRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAA 198
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL A+E+G Q+H +I++ +FVG+++V+MY K + A++VF +M +N
Sbjct: 199 VLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRN 258
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VSW +M+ G+ NG EA ++F M+ G++ +VI CAN+ + Q H
Sbjct: 259 AVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHC 318
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN-VRDEVSWTALVSGYAKFGKAN 358
+ + G + + AL+ Y KC I+D+ +LF M+ V++ VSWTA++SGY + G+ +
Sbjct: 319 QVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTD 378
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
++LF +M G++P+ T +L+A V + + ++ Y P T +
Sbjct: 379 RAMNLFCQMRREGVRPNHFTYSTILTA---NAAVSPSQIHALVVKTNYENSP--SVGTAL 433
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
D S+ G EA I ++ D + W+ +LS G++E
Sbjct: 434 SDSYSKIGDANEAAK-IFELIDEKDIVAWSAMLSGYAQMGDIE 475
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 187/398 (46%), Gaps = 44/398 (11%)
Query: 151 QNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVF 210
+N +EA++LF +R G D + VL CG L GKQ+H I+ ++V
Sbjct: 69 RNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVS 128
Query: 211 VGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
VG++LVDMY K +S++ E VF M KNVVSWT++L GY QNG +E+A+K+F MQ G
Sbjct: 129 VGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEG 188
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
I+P+ FT +V+ A ++E+G Q H + +GL S I V N++V Y K + D+
Sbjct: 189 IKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAK 248
Query: 331 RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
+F+ M R+ VSW ++++G+ G E +LF +M G+K + V+ C+
Sbjct: 249 AVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIK 308
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATL 450
+ + ++K ++ M+ S+ +++A
Sbjct: 309 EMSFAKQLHCQVIKNGSDFDLNIKTALMV-AYSKCSEIDDAFKLF--------------- 352
Query: 451 LSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVR 510
C +HG + W A + S Y G+ D L MR +GVR
Sbjct: 353 ---CMMHGVQNVVSWTA----------------IISGYVQNGRTDRAMNLFCQMRREGVR 393
Query: 511 KDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLN 548
+ + + I +A+ SP QI+A + K N
Sbjct: 394 PN-------HFTYSTILTANAAVSP--SQIHALVVKTN 422
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 142/293 (48%), Gaps = 14/293 (4%)
Query: 227 YAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCA 286
+++ +F + + +L + +N ++EA+ +F ++R+G D +L V+ C
Sbjct: 44 HSQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCG 103
Query: 287 NLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTA 346
L G Q H + + G + ++V +LV Y K ++ED R+F+EM V++ VSWT+
Sbjct: 104 CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTS 163
Query: 347 LVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY 406
L++GY + G + + LF +M G+KP+ T VL + G VEKG +++K
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKS- 222
Query: 407 GIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWA 466
G+ M+++ S++ + +AK+ + M +A+ W ++++ +G
Sbjct: 223 GLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSME-NRNAVSWNSMIAGFVTNG-------- 273
Query: 467 AESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIK 519
L+L+ + + L + ++ + V +L ++E K C IK
Sbjct: 274 ----LDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIK 322
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 269/648 (41%), Positives = 404/648 (62%), Gaps = 33/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW +ISG + + ++A++ + M G ++ FS+ + +S +++
Sbjct: 66 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICG-EVPTQFAFSSAIRACASLGSIEM 124
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H LKFG GS +FVGS L DMY+K G ++DA + F+E+P
Sbjct: 125 GKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP---------------- 168
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
KD +SWT MI G + G EA+ F++M E + +DQ S
Sbjct: 169 ---------------CKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCST 213
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA-WKN 239
L ACG L A + G+ +H+ +++ + ++FVG+AL DMY K ++ A +VF + +N
Sbjct: 214 LGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRN 273
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VVS+T ++ GY + E+ + +F ++R GIEP++FT S+I +CAN A+LE+GTQ H
Sbjct: 274 VVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHA 333
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ + VS+ LV YGKCG +E + + F+E+ E++W +LVS + + G +
Sbjct: 334 QVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKD 393
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
I +FE+M+ G+KP+ +T I +L+ CS AGLVE+G YF M K YG+ P +HY+C+I
Sbjct: 394 AIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVI 453
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L RAGRL+EAK FIN+MPF P+A GW + L +CRIHG+ E+GK AAE L++L+P N
Sbjct: 454 DLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSG 513
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+ VLLS+IYA++ +W+ V +R MR+ V+K PG SW+ + H+F A+DWS P
Sbjct: 514 ALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSA 573
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY +L+ L ++ GYVP SV D++ S K K+L+ HSE++A+AF L+ +P G PI
Sbjct: 574 IYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPII 633
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V KNLRVC DCH+A K+ISK+T R+I+VRD RFH F +G CSCGD+W
Sbjct: 634 VKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 198/400 (49%), Gaps = 36/400 (9%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H ++ G+ F+ + LV+MY+K G + A + FD +P++N+
Sbjct: 24 GKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNL------------ 71
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+SWT MI+GL QN EAI F MR+ G QF F S
Sbjct: 72 -------------------VSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSA 112
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ AC L ++E GKQ+H ++ +FVGS L DMY KC ++ A VF M K+
Sbjct: 113 IRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDE 172
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWTAM+ GY + G EEA+ F M + D L S + +C L + + G H
Sbjct: 173 VSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSS 232
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN-EMNVRDEVSWTALVSGYAKFGKANE 359
+ G S I V NAL Y K G++E + +F + R+ VS+T L+ GY + + +
Sbjct: 233 VVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEK 292
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH-YFEIMVKEYGIRPIHDHYTCM 418
+ +F ++ G++P+E T ++ AC+ +E+G + ++M + P + +
Sbjct: 293 GLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SIL 350
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+D+ + G LE+A +++ P + I W +L+S HG
Sbjct: 351 VDMYGKCGLLEQAIQAFDEIGDPTE-IAWNSLVSVFGQHG 389
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 143/272 (52%), Gaps = 6/272 (2%)
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
L GKQ+HA +I + F+ + LV+MY KC + +A +F TM +N+VSWTAM+ G
Sbjct: 21 LRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISG 80
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
QN EA++ FC M+ G P F S I +CA+L S+E G Q H +L G+ S
Sbjct: 81 LSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSE 140
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
+ V + L Y KCG + D+ ++F EM +DEVSWTA++ GY+K G+ E + F+KM+
Sbjct: 141 LFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMID 200
Query: 370 HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLE 429
+ D+ L L AC + GR +VK G + D+ S+AG +E
Sbjct: 201 EEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVK-LGFESDIFVGNALTDMYSKAGDME 259
Query: 430 EAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
A + F D+ + +C I G VE
Sbjct: 260 SASNV-----FGIDSECRNVVSYTCLIDGYVE 286
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 8/198 (4%)
Query: 274 DDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLF 333
D L VI + A L G Q H + G ++N LV Y KCG ++ + +LF
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 334 NEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVE 393
+ M R+ VSWTA++SG ++ K +E I F M G P + + AC+ G +E
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123
Query: 394 KGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
G+ + +K +GI + + D+ S+ G + +A +MP D + W +
Sbjct: 124 MGKQMHCLALK-FGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPC-KDEVSWTAM--- 178
Query: 454 CRIHGNVEIGKWAAESLL 471
I G +IG++ E+LL
Sbjct: 179 --IDGYSKIGEF-EEALL 193
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 255/643 (39%), Positives = 399/643 (62%), Gaps = 32/643 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +SWN +I+GHA HGS A K++ M K+GL +ITF+++L+ + ++LGRQI
Sbjct: 551 DIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGL-EPDKITFASVLVGCKNPEALELGRQI 609
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H I++ G V +G+ L++MY + G + DA
Sbjct: 610 HMLIIESGLQLDVNLGNALINMYIRCGSLQDAYE-------------------------- 643
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+F ++ ++ +SWT MI G G +R+A +LF +M+ +G + TF S+L AC
Sbjct: 644 -----VFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKAC 698
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L+EGK++ A I+ + ++ + VG+AL+ Y K S+ A VF M ++++SW
Sbjct: 699 MSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWN 758
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
M+ GY QNG A++ MQ G+ + F+ S++++C++ ++LEEG + H +
Sbjct: 759 KMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKR 818
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
+ + V AL++ Y KCG++E++ +F+ ++ V+W A+++ YA+ G A++ +D F
Sbjct: 819 KMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFF 878
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
M G+KPD T +LSAC+ +GLV +G F + ++G+ P +HY C++ +L R
Sbjct: 879 NCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGR 938
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AGR +EA++ IN+MPFPPDA W TLL +CRIHGNV + + AA + L+L+ NPA YVLL
Sbjct: 939 AGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVYVLL 998
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S++YA+ G+WD V+++RR M +G+RK+PG SWI+ + +H F A D S P + +IY EL
Sbjct: 999 SNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYEEL 1058
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
++L+ +M + GY PD VLH+++ + L HSE+LAIA+GLL PPG PIR+ KNL
Sbjct: 1059 KRLSLEMERAGYSPDTQYVLHNLDKEHQETSLCTHSERLAIAYGLLKTPPGTPIRIFKNL 1118
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R+C DCH A+K+ISK+ REI+ RD+ RFH FKNG+CSC DFW
Sbjct: 1119 RICGDCHTASKFISKLVGREIIARDSNRFHTFKNGKCSCEDFW 1161
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 147/507 (28%), Positives = 262/507 (51%), Gaps = 40/507 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V +N LI+ A HG +A + Y M DG+ ++R T+ ++L S+ + + G I
Sbjct: 349 DVVVYNALIAALAQHGHYEEAFEQYYQMRSDGV-VMNRTTYLSVLNACSTSKALGAGELI 407
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H HI + G S V +G+ L+ MYA+ G +LP
Sbjct: 408 HSHISEVGHSSDVQIGNSLISMYARCG----------DLPR------------------- 438
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+R LF M +D ISW +I G + EA+ L+++M+ EG+ + TF +L+AC
Sbjct: 439 --ARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSAC 496
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
A +GK IH I+R+ K N + +AL++MY +C SI A++VF ++++SW
Sbjct: 497 TNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWN 556
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
+M+ G+ Q+G E A K+F M++ G+EPD T SV+ C N +LE G Q H + +
Sbjct: 557 SMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIES 616
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
GL + + NAL+ Y +CG+++D++ +F+ + R+ +SWTA++ G+A G+ + +LF
Sbjct: 617 GLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELF 676
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+M + G KP + T +L AC + +++G+ ++ G +I S+
Sbjct: 677 WQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNS-GYELDTGVGNALISAYSK 735
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG----NVEIGKWAAESLLELDPYNPAS 480
+G + +A+ +KMP D + W +++ +G ++ E + L+ ++ S
Sbjct: 736 SGSMTDARKVFDKMP-NRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVS 794
Query: 481 YVLLSSIYAS--KGKWDHVSQLRRTMR 505
+ S +++ +GK H ++R M+
Sbjct: 795 ILNACSSFSALEEGKRVHAEIVKRKMQ 821
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 135/461 (29%), Positives = 237/461 (51%), Gaps = 40/461 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D +SWN +I+G+A +A+K+Y M +G+ R+TF +L ++
Sbjct: 446 MPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGV-KPGRVTFLHLLSACTNSSAYSD 504
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ IH IL+ G S + + L++MY + G I +A+ F+ ++I+ +N+MI G +
Sbjct: 505 GKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQ 564
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G E + +L F EM+ EGL D+ TF SV
Sbjct: 565 HGSYEAAYKL-------------------------------FLEMKKEGLEPDKITFASV 593
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C ALE G+QIH II + + +V +G+AL++MY +C S++ A VF ++ +NV
Sbjct: 594 LVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNV 653
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SWTAM+ G+ G +A ++F MQ +G +P T S++ +C + A L+EG +
Sbjct: 654 MSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAH 713
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
L +G V NAL++ Y K G++ D+ ++F++M RD +SW +++GYA+ G
Sbjct: 714 ILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTA 773
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY---TC 417
+ +M G+ ++ + + +L+ACS +E+G+ +VK R +
Sbjct: 774 LQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVK----RKMQGDVRVGAA 829
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+I + ++ G LEEA+ + + + W ++++ HG
Sbjct: 830 LISMYAKCGSLEEAQEVFDNFT-EKNVVTWNAMINAYAQHG 869
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 216/427 (50%), Gaps = 33/427 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VS+N ++ +A V + + ++ M +G+ ++T+ +L ++ +D G++I
Sbjct: 248 DVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPP-DKVTYINLLDAFTTPSMLDEGKRI 306
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H + G S + VG+ L M+ + G + AK+ +
Sbjct: 307 HKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALE----------------------- 343
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
D+D + + +I L Q+G EA + + +MR +G+ M++ T+ SVL AC
Sbjct: 344 --------AFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNAC 395
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
AL G+ IH+ I H +V +G++L+ MY +C + A +F TM ++++SW
Sbjct: 396 STSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWN 455
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
A++ GY + EA+K++ MQ G++P T ++S+C N ++ +G H L +
Sbjct: 456 AIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRS 515
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G+ S ++NAL+ Y +CG+I ++ +F RD +SW ++++G+A+ G LF
Sbjct: 516 GIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLF 575
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+M GL+PD++T VL C +E GR +++ E G++ + +I++ R
Sbjct: 576 LEMKKEGLEPDKITFASVLVGCKNPEALELGRQ-IHMLIIESGLQLDVNLGNALINMYIR 634
Query: 425 AGRLEEA 431
G L++A
Sbjct: 635 CGSLQDA 641
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 228/461 (49%), Gaps = 34/461 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D +SWN LIS +A G A +++ M G S+IT+ ++L S ++
Sbjct: 143 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIP-SKITYISILTACCSPAELEY 201
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G++IH I++ G+ V + L++MY K + A++ F + +++V YNTM+ +
Sbjct: 202 GKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQ 261
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ VE E I LF +M EG+ D+ T+ ++
Sbjct: 262 KAYVE-------------------------------ECIGLFGQMSSEGIPPDKVTYINL 290
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A L+EGK+IH + ++ VG+AL M+ +C + A+ A ++V
Sbjct: 291 LDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDV 350
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V + A++ Q+G EEA + + M+ +G+ + T SV+++C+ +L G H
Sbjct: 351 VVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSH 410
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
G S + + N+L++ Y +CG++ + LFN M RD +SW A+++GYA+ E
Sbjct: 411 ISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEA 470
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ L+++M S G+KP VT + +LSAC+ + G+ E +++ GI+ +++
Sbjct: 471 MKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRS-GIKSNGHLANALMN 529
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+ R G + EA++ D I W ++++ HG+ E
Sbjct: 530 MYRRCGSIMEAQNVFEGTR-ARDIISWNSMIAGHAQHGSYE 569
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 197/412 (47%), Gaps = 33/412 (8%)
Query: 41 SRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF 100
+R + ++ + +R + ++IH +++ G G +F+ + L++MY K + DA + F
Sbjct: 81 NRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVF 140
Query: 101 DELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAID 160
++P + D ISW ++I+ Q G +++A
Sbjct: 141 LKMPRR-------------------------------DVISWNSLISCYAQQGFKKKAFQ 169
Query: 161 LFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYC 220
LF EM+ G + T+ S+LTAC LE GK+IH+ II ++ + V ++L++MY
Sbjct: 170 LFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYG 229
Query: 221 KCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGS 280
KC+ + A VF + ++VVS+ ML Y Q EE + +F M GI PD T +
Sbjct: 230 KCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYIN 289
Query: 281 VISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD 340
++ + + L+EG + H ++ GL S I V AL T + +CG++ + + RD
Sbjct: 290 LLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRD 349
Query: 341 EVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
V + AL++ A+ G E + + +M S G+ + T + VL+ACS + + G
Sbjct: 350 VVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAG-ELIH 408
Query: 401 IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ E G +I + +R G L A+ N MP D I W +++
Sbjct: 409 SHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMP-KRDLISWNAIIA 459
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 180/358 (50%), Gaps = 16/358 (4%)
Query: 116 TGLLRR--GLVEESRRLFRGMKDKDSI------SWTTMITGLMQN----GLEREAIDLFR 163
TG LRR G+ E S R + +++ S S + +M++ G ERE DL
Sbjct: 14 TGSLRRVAGVCEFSVRPWPAEQNRSSTGAAGGASSNLVSVKVMRDEQHRGSERE--DLSN 71
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
+ ++ + ++ C +L E K+IHA ++ ++F+ + L++MY KC+
Sbjct: 72 AYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCR 131
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
S+ A VF M ++V+SW +++ Y Q G ++A ++F MQ G P T S+++
Sbjct: 132 SVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILT 191
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+C + A LE G + H + + G V N+L+ YGKC ++ + ++F+ + RD VS
Sbjct: 192 ACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVS 251
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
+ ++ YA+ E I LF +M S G+ PD+VT I +L A + ++++G+ ++ V
Sbjct: 252 YNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAV 311
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
E G+ T + + R G + AK + D + + L+++ HG+ E
Sbjct: 312 NE-GLNSDIRVGTALATMFVRCGDVAGAKQALEAFA-DRDVVVYNALIAALAQHGHYE 367
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 269/648 (41%), Positives = 404/648 (62%), Gaps = 33/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW +ISG + + ++A++ + M G ++ FS+ + +S +++
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICG-EVPTQFAFSSAIRACASLGSIEM 59
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H LKFG GS +FVGS L DMY+K G ++DA + F+E+P
Sbjct: 60 GKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP---------------- 103
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
KD +SWT MI G + G EA+ F++M E + +DQ S
Sbjct: 104 ---------------CKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCST 148
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA-WKN 239
L ACG L A + G+ +H+ +++ + ++FVG+AL DMY K ++ A +VF + +N
Sbjct: 149 LGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRN 208
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VVS+T ++ GY + E+ + +F ++R GIEP++FT S+I +CAN A+LE+GTQ H
Sbjct: 209 VVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHA 268
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ + VS+ LV YGKCG +E + + F+E+ E++W +LVS + + G +
Sbjct: 269 QVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKD 328
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
I +FE+M+ G+KP+ +T I +L+ CS AGLVE+G YF M K YG+ P +HY+C+I
Sbjct: 329 AIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVI 388
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L RAGRL+EAK FIN+MPF P+A GW + L +CRIHG+ E+GK AAE L++L+P N
Sbjct: 389 DLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSG 448
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+ VLLS+IYA++ +W+ V +R MR+ V+K PG SW+ + H+F A+DWS P
Sbjct: 449 ALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSA 508
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY +L+ L ++ GYVP SV D++ S K K+L+ HSE++A+AF L+ +P G PI
Sbjct: 509 IYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPII 568
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V KNLRVC DCH+A K+ISK+T R+I+VRD RFH F +G CSCGD+W
Sbjct: 569 VKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 616
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 269/643 (41%), Positives = 392/643 (60%), Gaps = 32/643 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSWN +I+G H A+++ M + G+ + T S+ L + +LGRQ+
Sbjct: 323 DIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICP-NIFTLSSALKACAGMGLKELGRQL 381
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H ++K S +FV LVDMY+K L+ DA+ F+ LPE
Sbjct: 382 HSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPE------------------- 422
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
KD I+W +I+G Q + EA+ LF EM EG+ +Q T ++L +
Sbjct: 423 ------------KDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKST 470
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
GL + +Q+H +++ +++V ++L+D Y KC ++ AE +F ++VS+T
Sbjct: 471 AGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFT 530
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
+M+ Y Q G EEA+K+F MQ ++PD F S++++CANL++ E+G Q H L
Sbjct: 531 SMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKY 590
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G + I N+LV Y KCG+I+D+ R F+E+ R VSW+A++ G A+ G + + LF
Sbjct: 591 GFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLF 650
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+ML G+ P+ +TL+ VL AC+ AGLV + + YFE M + +G +P+ +HY CMID+L R
Sbjct: 651 NQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGR 710
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG++ EA +NKMPF +A W LL + RIH +VE+G+ AAE L L+P ++VLL
Sbjct: 711 AGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLL 770
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
++IYAS GKW++V+++RR MR+ V+K+PG SWI+ K +V+ F D S S +IYA+L
Sbjct: 771 ANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKL 830
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
++L+ M K GYVP + LHDVE SEK +L HHSEKLA+AFGL+ P G PIRV KNL
Sbjct: 831 DELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNL 890
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RVC DCH A KYI KI REI+VRD RFH FK+G CSCGD+W
Sbjct: 891 RVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 933
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 149/540 (27%), Positives = 254/540 (47%), Gaps = 69/540 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + VSWN L S + +AV ++ M+ G+ + + S+M+ + R
Sbjct: 218 IPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGI-KPNEFSLSSMVNACTGLRDSSR 276
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ IHG+++K G+ F + LVDMYAK+G + DA F+++
Sbjct: 277 GKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKI----------------- 319
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
K D +SW +I G + + +A++L +M+ G+ + FT S
Sbjct: 320 --------------KQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSA 365
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC G+ E G+Q+H+ +++ D + ++FV LVDMY KC ++ A F + K++
Sbjct: 366 LKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDL 425
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
++W A++ GY Q EA+ +F M + GI + TL +++ S A L + Q HG
Sbjct: 426 IAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGL 485
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
S+ +G S I V N+L+ YGKC ++ED+ R+F E + D VS+T++++ YA++G+ E
Sbjct: 486 SVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEA 545
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI------------ 408
+ LF +M LKPD +L+AC+ E+G+ + + +YG
Sbjct: 546 LKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQ-LHVHILKYGFVLDIFAGNSLVN 604
Query: 409 -----RPIHD--------------HYTCMIDILSRAGRLEEAKSFINKM---PFPPDAIG 446
I D ++ MI L++ G +A N+M P+ I
Sbjct: 605 MYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHIT 664
Query: 447 WATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS--YVLLSSIYASKGKWDHVSQLRRTM 504
++L +C G V K ES+ EL + P Y + + GK + +L M
Sbjct: 665 LVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKM 724
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 161/542 (29%), Positives = 260/542 (47%), Gaps = 72/542 (13%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW+ LISG+A +G A+ ++ M G+ + TFS++L S + + +G+Q+
Sbjct: 121 DLVSWSALISGYAQNGLGGGALMAFHEMHLLGV-KCNEFTFSSVLKACSIVKDLRIGKQV 179
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG ++ GF VFV + LV MYAK D+KR FDE+PE+N+V
Sbjct: 180 HGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVV--------------- 224
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
SW + + +Q EA+ LF EM L G+ ++F+ S++ AC
Sbjct: 225 ----------------SWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNAC 268
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
GL GK IH ++I+ + + F +ALVDMY K + A SVF + ++VSW
Sbjct: 269 TGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWN 328
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
A++ G + E+A+++ M+R+GI P+ FTL S + +CA + E G Q H +
Sbjct: 329 AVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKM 388
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
+ S + VS LV Y KC +ED+ FN + +D ++W A++SGY+++ + E + LF
Sbjct: 389 DMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLF 448
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE------YGIRPIHDHY--- 415
+M G+ ++ TL +L + + +V R + VK Y + + D Y
Sbjct: 449 VEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKC 508
Query: 416 ---------------------TCMIDILSRAGRLEEA-KSFI--NKMPFPPDAIGWATLL 451
T MI ++ G+ EEA K F+ M PD ++LL
Sbjct: 509 SHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLL 568
Query: 452 SSCRIHGNVEIGKWAAESLLE----LDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREK 507
++C E GK +L+ LD + S V ++YA G D + + E+
Sbjct: 569 NACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLV---NMYAKCGSIDDAGRAFSELTER 625
Query: 508 GV 509
G+
Sbjct: 626 GI 627
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 204/414 (49%), Gaps = 37/414 (8%)
Query: 41 SRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF 100
+ +++S +L + + + G QIH HI K G + + L+++Y+K R F
Sbjct: 55 TSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKC-------RNF 107
Query: 101 DELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAID 160
R LV+ES + D +SW+ +I+G QNGL A+
Sbjct: 108 G-----------------YARKLVDES-------SEPDLVSWSALISGYAQNGLGGGALM 143
Query: 161 LFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYC 220
F EM L G+ ++FTF SVL AC + L GKQ+H ++ + + +VFV + LV MY
Sbjct: 144 AFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYA 203
Query: 221 KCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGS 280
KC ++ +F + +NVVSW A+ Y Q EAV +F M +GI+P++F+L S
Sbjct: 204 KCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSS 263
Query: 281 VISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD 340
++++C L G HG + G +NALV Y K G++ D+ +F ++ D
Sbjct: 264 MVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPD 323
Query: 341 EVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
VSW A+++G + ++L +M G+ P+ TL L AC+ GL E GR
Sbjct: 324 IVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHS 383
Query: 401 IMVKEYGIRPIHDHYTC--MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
++K + D + ++D+ S+ LE+A+ N +P D I W ++S
Sbjct: 384 SLMK---MDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLP-EKDLIAWNAIIS 433
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 156/287 (54%), Gaps = 4/287 (1%)
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
++ +L+ C +L G QIHA I ++ D+ + + L+++Y KC++ YA +
Sbjct: 58 SYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDES 117
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
+ ++VSW+A++ GY QNG A+ F M G++ ++FT SV+ +C+ + L G
Sbjct: 118 SEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGK 177
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
Q HG +V+G + V+N LV Y KC DS RLF+E+ R+ VSW AL S Y +
Sbjct: 178 QVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQID 237
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK-EYGIRPIHDH 414
E + LF +M+ G+KP+E +L +++AC+ +G+ ++K Y P +
Sbjct: 238 FCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSAN 297
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
++D+ ++ G L +A S K+ PD + W +++ C +H + E
Sbjct: 298 --ALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAGCVLHEHHE 341
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%)
Query: 258 EAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALV 317
+ I + + P + ++S C SL G Q H +GL ++ N L+
Sbjct: 39 QTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLI 98
Query: 318 TFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEV 377
Y KC N + +L +E + D VSW+AL+SGYA+ G + F +M G+K +E
Sbjct: 99 NLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEF 158
Query: 378 TLIGVLSACSRAGLVEKGRHYFEIMV 403
T VL ACS + G+ ++V
Sbjct: 159 TFSSVLKACSIVKDLRIGKQVHGVVV 184
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust.
Identities = 260/643 (40%), Positives = 399/643 (62%), Gaps = 32/643 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D ++N++I G+A G A +++ M ++G +RI+F ++L S+ + G+ +
Sbjct: 227 DVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGF-KPNRISFLSILDGCSTPEALAWGKAV 285
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H + G V V + L+ MY G I
Sbjct: 286 HAQCMNTGLVDDVRVATALIRMYMGCGSI------------------------------- 314
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
E +RR+F MK +D +SWT MI G +N +A LF M+ EG+ D+ T+ ++ AC
Sbjct: 315 EGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINAC 374
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L ++IH+ ++R ++ V +ALV MY KC +IK A VF M+ ++VVSW+
Sbjct: 375 ASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWS 434
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
AM+ Y +NGC EEA + F M+RN +EPD T +++++C +L +L+ G + + +++
Sbjct: 435 AMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKA 494
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
L+S I V NAL+ K G+IE + +F M RD V+W ++ GY+ G A E +DLF
Sbjct: 495 DLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLF 554
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
++ML +P+ VT +GVLSACSRAG VE+GR +F ++ GI P + Y CM+D+L R
Sbjct: 555 DRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGR 614
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG L+EA+ IN+MP P++ W+TLL++CRI+GN+++ + AAE L +PY+ A YV L
Sbjct: 615 AGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQL 674
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S +YA+ G W++V+++R+ M +GVRK+ GC+WI+ + ++H F +D S P + +IYAEL
Sbjct: 675 SHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAEL 734
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
+L + +EGY+P +VLH+V EK + +++HSEKLAIA+G+L +P G PIR+ KNL
Sbjct: 735 ARLMTAIKREGYIPVTQNVLHNVGEQEKEEAISYHSEKLAIAYGVLSLPSGAPIRIFKNL 794
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RVC DCH+A+K+ISK+T REI+ RDA RFH FKNG CSCGD+W
Sbjct: 795 RVCGDCHSASKFISKVTGREIIARDASRFHHFKNGVCSCGDYW 837
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 140/455 (30%), Positives = 230/455 (50%), Gaps = 38/455 (8%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V+WN +I+G+A G V +A ++ M+ + + S ITF +L SS + LG++ H
Sbjct: 128 VTWNAIIAGYAQLGHVKEAFALFRQMVDEAM-EPSIITFLIVLDACSSPAGLKLGKEFHA 186
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++K GF S +G+ LV MY K G ++
Sbjct: 187 QVIKVGFVSDFRIGTALVSMYVK-------------------------------GGSMDG 215
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+R++F G+ +D ++ MI G ++G +A LF M+ EG ++ +F S+L C
Sbjct: 216 ARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCST 275
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
AL GK +HA + D+V V +AL+ MY C SI+ A VF M ++VVSWT M
Sbjct: 276 PEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVM 335
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ GY +N E+A +F MQ GI+PD T +I++CA+ A L + H + + G
Sbjct: 336 IRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGF 395
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ + V ALV Y KCG I+D+ ++F+ M+ RD VSW+A++ Y + G E + F
Sbjct: 396 GTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHL 455
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR--PIHDHYTCMIDILSR 424
M + ++PD VT I +L+AC G ++ G + +K + P+ + +I++ +
Sbjct: 456 MKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGN---ALINMNVK 512
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
G +E A+ M D + W ++ +HGN
Sbjct: 513 HGSIERARYIFENM-VQRDVVTWNVMIGGYSLHGN 546
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 189/348 (54%), Gaps = 4/348 (1%)
Query: 107 NIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR 166
NI NT+I G + E+R+ F +++K ++W +I G Q G +EA LFR+M
Sbjct: 95 NIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMV 154
Query: 167 LEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIK 226
E + TF VL AC L+ GK+ HA +I+ + +G+ALV MY K S+
Sbjct: 155 DEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMD 214
Query: 227 YAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCA 286
A VF + ++V ++ M+ GY ++G E+A ++F MQ+ G +P+ + S++ C+
Sbjct: 215 GARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCS 274
Query: 287 NLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTA 346
+L G H + + TGL+ + V+ AL+ Y CG+IE + R+F++M VRD VSWT
Sbjct: 275 TPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTV 334
Query: 347 LVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE- 405
++ GYA+ + LF M G++PD +T I +++AC+ + + R +V+
Sbjct: 335 MIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAG 394
Query: 406 YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+G + D T ++ + ++ G +++A+ + M D + W+ ++ +
Sbjct: 395 FGTDLLVD--TALVHMYAKCGAIKDARQVFDAMS-RRDVVSWSAMIGA 439
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 182/357 (50%), Gaps = 34/357 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSW ++I G+A + ++ DA ++ M ++G+ RIT+ ++ +S + L
Sbjct: 324 MKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGI-QPDRITYIHIINACASSADLSL 382
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
R+IH +++ GFG+ + V + LV MYAK G I DA++ FD + +++V ++ MI +
Sbjct: 383 AREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYV- 441
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+NG EA + F M+ + D T+ ++
Sbjct: 442 ------------------------------ENGCGEEAFETFHLMKRNNVEPDVVTYINL 471
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L ACG L AL+ G +I+ I+ D ++ VG+AL++M K SI+ A +F M ++V
Sbjct: 472 LNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDV 531
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+W M+ GY +G + EA+ +F M + P+ T V+S+C+ +EEG +F
Sbjct: 532 VTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSY 591
Query: 301 SL-VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFG 355
L G++ + + +V G+ G ++++ L N M ++ S W+ L++ +G
Sbjct: 592 LLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYG 648
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 168/359 (46%), Gaps = 9/359 (2%)
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
+D T+ + C L GKQ+ II++ + N++ + L+ ++ C ++ A
Sbjct: 59 IDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQT 118
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASL 291
F ++ K VV+W A++ GY Q G +EA +F M +EP T V+ +C++ A L
Sbjct: 119 FDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGL 178
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
+ G +FH + + G +S + ALV+ Y K G+++ + ++F+ + RD ++ ++ GY
Sbjct: 179 KLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGY 238
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
AK G + LF +M G KP+ ++ + +L CS + G+ G+
Sbjct: 239 AKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKA-VHAQCMNTGLVDD 297
Query: 412 HDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE--IGKWAAES 469
T +I + G +E A+ +KM D + W ++ + N+E G +A
Sbjct: 298 VRVATALIRMYMGCGSIEGARRVFDKMKV-RDVVSWTVMIRGYAENSNIEDAFGLFATMQ 356
Query: 470 LLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFS 528
+ P + +Y+ + + AS L R + + VR G + + VH+++
Sbjct: 357 EEGIQP-DRITYIHIINACASSADLS----LAREIHSQVVRAGFGTDLLVDTALVHMYA 410
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 115/266 (43%), Gaps = 37/266 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSW+ +I + +G +A + ++LM ++ + +T+ +L +DL
Sbjct: 425 MSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNV-EPDVVTYINLLNACGHLGALDL 483
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +I+ +K S++ VG+ L++M K
Sbjct: 484 GMEIYTQAIKADLVSHIPVGNALINMNVK------------------------------- 512
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G +E +R +F M +D ++W MI G +G REA+DLF M E + TF V
Sbjct: 513 HGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGV 572
Query: 181 LTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK- 238
L+AC +EEG++ ++++ + + +VD+ + + AE + M K
Sbjct: 573 LSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKP 632
Query: 239 NVVSWTAMLVG---YGQNGCSEEAVK 261
N W+ +L YG +E A +
Sbjct: 633 NSSIWSTLLAACRIYGNLDVAERAAE 658
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 255/641 (39%), Positives = 408/641 (63%), Gaps = 32/641 (4%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V WNL++ + + + +++ M G+ + ++ T+ +L + ++LG QIH
Sbjct: 312 VLWNLMLVAYGQISDLAKSFEIFGQMQATGI-HPNKFTYPCILRTCTCTGQIELGEQIHS 370
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+K GF S ++V L+DMY+K + ++
Sbjct: 371 LSIKNGFESDMYVSGVLIDMYSKYRCL-------------------------------DK 399
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+R++ ++ +D +SWT+MI G +Q+ EA+ F+EM+ G+ D S +AC G
Sbjct: 400 ARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAG 459
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+ A+ +G QIHA + + + ++ + + LV++Y +C + A S+FR + K+ ++W +
Sbjct: 460 IKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGL 519
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ G+GQ+ E+A+ +F M + G + + FT S IS+ ANLA +++G Q HGR++ TG
Sbjct: 520 ISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGH 579
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
S V+NAL++ YGKCG+IED+ +F+EM++R+EVSW +++ ++ G+ E +DLF++
Sbjct: 580 TSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQ 639
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M GLKP++VT IGVL+ACS GLVE+G YF+ M YG+ PI DHY C++DIL RAG
Sbjct: 640 MKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAG 699
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+L+ A+ F+++MP +A+ W TLLS+C++H N+EIG+ AA+ LLEL+P++ ASYVLLS+
Sbjct: 700 QLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSN 759
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
YA GKW + Q+R+ M+++G+RK+PG SWI+ K+ VH F D P SDQIY L +
Sbjct: 760 AYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSE 819
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
LN ++ K GY + ++ H+ E +K HSEKLA+AFGL+ +PP +P+RV+KNLRV
Sbjct: 820 LNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRV 879
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCH+ K+ S++T+REI++RD RFH F +G CSCGD+W
Sbjct: 880 CDDCHSWMKFTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 135/459 (29%), Positives = 236/459 (51%), Gaps = 36/459 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M F D V++N LISGHA G A+++++ M GL +T +++L +S +
Sbjct: 205 MLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGL-RPDCVTVASLLAACASVGDLQK 263
Query: 61 GRQIHGHILKFGFG-SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G+Q+H ++LK G Y+ GS L+D+Y K G I A F+ N+V++N M L+
Sbjct: 264 GKQLHSYLLKAGMSFDYITEGS-LLDLYVKCGDIETAHDIFNLGDRTNVVLWNLM---LV 319
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
G + + + F ++F +M+ G+ ++FT+
Sbjct: 320 AYGQISDLAKSF----------------------------EIFGQMQATGIHPNKFTYPC 351
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L C +E G+QIH+ I+N + +++V L+DMY K + + A + + ++
Sbjct: 352 ILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRD 411
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VVSWT+M+ GY Q+ EEA+ F MQ G+ PD+ L S S+CA + ++ +G Q H
Sbjct: 412 VVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHA 471
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
R V+G + I++ N LV Y +CG E++ LF E++ +DE++W L+SG+ + +
Sbjct: 472 RVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQ 531
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ +F KM G K + T I +SA + +++G+ VK G + +I
Sbjct: 532 ALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKT-GHTSETEVANALI 590
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ + G +E+AK ++M + + W T+++SC HG
Sbjct: 591 SLYGKCGSIEDAKMIFSEMSL-RNEVSWNTIITSCSQHG 628
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 131/453 (28%), Positives = 213/453 (47%), Gaps = 44/453 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW ++SG+A G +A ++Y+ M + + S++L + + GR I
Sbjct: 108 DHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYV-LSSVLSACTKGKLFAQGRMI 166
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H + K F S FVG+ L+ +Y GF G
Sbjct: 167 HAQVYKQAFCSETFVGNALIALYL----------GF---------------------GSF 195
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ + R+F M D +++ T+I+G Q G A+ +F EM+L GL D T S+L AC
Sbjct: 196 KLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAAC 255
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+ L++GKQ+H+++++ + +L+D+Y KC I+ A +F NVV W
Sbjct: 256 ASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWN 315
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
MLV YGQ ++ +IF MQ GI P+ FT ++ +C +E G Q H S+
Sbjct: 316 LMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKN 375
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G S + VS L+ Y K ++ + ++ + RD VSWT++++GY + E + F
Sbjct: 376 GFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATF 435
Query: 365 EKMLSHGLKPDEVTLIGVLSACS-----RAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
++M G+ PD + L SAC+ R GL R Y + I + ++
Sbjct: 436 KEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISI------WNTLV 489
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
++ +R GR EEA S ++ D I W L+S
Sbjct: 490 NLYARCGRSEEAFSLFREIDH-KDEITWNGLIS 521
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 195/392 (49%), Gaps = 37/392 (9%)
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
+IH + G G+ +G+ L+D+YAK GL++ A
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQA-------------------------- 97
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
R++F+ + +D +SW M++G Q GL +EA L+ +M + + SVL+
Sbjct: 98 -----RQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLS 152
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
AC +G+ IHA + + FVG+AL+ +Y S K AE VF M + + V+
Sbjct: 153 ACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVT 212
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL 302
+ ++ G+ Q G E A++IF MQ +G+ PD T+ S++++CA++ L++G Q H L
Sbjct: 213 FNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLL 272
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
G+ +L+ Y KCG+IE +H +FN + + V W ++ Y + ++ +
Sbjct: 273 KAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFE 332
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT--CMID 420
+F +M + G+ P++ T +L C+ G +E G + +K G D Y +ID
Sbjct: 333 IFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKN-GFES--DMYVSGVLID 389
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ S+ L++A+ + +M D + W ++++
Sbjct: 390 MYSKYRCLDKARKIL-EMLEKRDVVSWTSMIA 420
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 264/643 (41%), Positives = 393/643 (61%), Gaps = 32/643 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+W+ +I+G G +A ++++LM + G ++ T S+++ +++ + G+ I
Sbjct: 116 DVVAWSAMITGLDQQGHGQEAAELFHLMRRKG-ARPNQFTLSSLVSTATNMGDLRYGQSI 174
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG I K+GF S V +PL+ MY ++ V
Sbjct: 175 HGCICKYGFESDNLVSNPLIMMY-------------------------------MKSRCV 203
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
E+ ++F M + D +SW +++G + +F +M LEG + FTF SVL +C
Sbjct: 204 EDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSC 263
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
LL E GKQ+HA II+N D+ FVG+ALVDMY K + ++ A F + +++ SWT
Sbjct: 264 SSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWT 323
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++ GY Q +E+AVK F MQR GI+P+++TL S +S C+++A+LE G Q H ++
Sbjct: 324 VIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKA 383
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G I V +ALV YGKCG +E + +F + RD VSW ++SGY++ G+ + ++ F
Sbjct: 384 GHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAF 443
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
MLS G+ PDE T IGVLSACS GLVE+G+ F+ M K YGI P +HY CM+DIL R
Sbjct: 444 RMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGR 503
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG+ E K FI +M P ++ W T+L +C++HGNV+ G+ AA+ L E++P +SY+LL
Sbjct: 504 AGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILL 563
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S+I+ASKG+WD V +R M +G++K+PGCSW++ +VH+F + D S P +IYA+L
Sbjct: 564 SNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKL 623
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
+KL + ++ GYVP VLH+V EK++ L +HSE+LA++F LL PIR+ KNL
Sbjct: 624 DKLGQSLMSIGYVPKTEVVLHNVSNKEKMEHLYYHSERLALSFALLSTNAVKPIRIFKNL 683
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R+C DCH+ K IS IT +EI+VRD RFH FK G CSC D W
Sbjct: 684 RICEDCHDFMKLISDITNQEIVVRDIRRFHHFKRGTCSCQDRW 726
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/461 (30%), Positives = 223/461 (48%), Gaps = 34/461 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP +GVSWN L++G+A G +K++ M K+ S+ T ST+L ++ +
Sbjct: 11 MPEKNGVSWNALLNGYAQLGDGKKVLKLFCKM-KECETKFSKFTLSTVLKGCANTGSLRE 69
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +H L+ G F+G LVDMY+K G +YDA
Sbjct: 70 GKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDA------------------------ 105
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
++F +++ D ++W+ MITGL Q G +EA +LF MR +G +QFT S+
Sbjct: 106 -------LKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSL 158
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
++ + L G+ IH I + + + V + L+ MY K + ++ VF M ++
Sbjct: 159 VSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDL 218
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW A+L G+ + +IF M G +P+ FT SV+ SC++L E G Q H
Sbjct: 219 VSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAH 278
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ V ALV Y K +ED+ F+ + RD SWT ++SGYA+ +A +
Sbjct: 279 IIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKA 338
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ F +M G+KP+E TL LS CS +E GR + VK I + ++D
Sbjct: 339 VKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVG-SALVD 397
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+ + G +E A++ I K D + W T++S HG E
Sbjct: 398 LYGKCGCMEHAEA-IFKGLISRDIVSWNTIISGYSQHGQGE 437
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 173/331 (52%), Gaps = 6/331 (1%)
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
+E + RLF GM +K+ +SW ++ G Q G ++ + LF +M+ +FT +VL
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C +L EGK +HA +R+ + + F+G +LVDMY KC ++ A VF + +VV+W
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
+AM+ G Q G +EA ++F M+R G P+ FTL S++S+ N+ L G HG
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
G S VSN L+ Y K +ED +++F M D VSW AL+SG+ +
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRI 240
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--TCMIDI 421
F +ML G KP+ T I VL +CS E G+ ++K D + T ++D+
Sbjct: 241 FYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKN---SSDDDDFVGTALVDM 297
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
++A LE+A +++ D W ++S
Sbjct: 298 YAKARCLEDAGVAFDRL-VNRDIFSWTVIIS 327
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 277/694 (39%), Positives = 418/694 (60%), Gaps = 58/694 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLM-----LKDGLGNLSRITFSTMLIMSSSRRCVD 59
D V +N +I+G++ + A++++ M D S ++ ST LI R+C
Sbjct: 111 DTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASVLSAST-LIFYDERQC-- 167
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGL---------IYDAKRGFDELPEKNIVM 110
Q+HG ++KFG + V + L+ +Y K + A++ FDE+P++N +
Sbjct: 168 --GQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFI 225
Query: 111 YNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL 170
+ T+ITG +R G + +R + M ++ I+W MI+G + +GL +A+ LFR+MRL G+
Sbjct: 226 WTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGV 285
Query: 171 AMDQFTFGSVLTAC--GGLLALEEGKQIHAFIIRND-HKDNVF---VGSALVDMYCK--- 221
+D+ T+ SV++AC GG L GKQ+HA+I++N+ + D F VG+ L+ +Y K
Sbjct: 286 QVDESTYTSVISACADGGFFLL--GKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGK 343
Query: 222 ---CKSIKY-------------------------AESVFRTMAWKNVVSWTAMLVGYGQN 253
+ I Y A+S F M KN+++WT M+ G QN
Sbjct: 344 VDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQN 403
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVS 313
G E+A+K+F M+ +G EP+D+ I++C+ L +LE G Q H + + G S ++V
Sbjct: 404 GFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVG 463
Query: 314 NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLK 373
NA++T Y +CG +E + +F M D VSW ++++ + G + I+L+E+ML G+
Sbjct: 464 NAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGIL 523
Query: 374 PDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKS 433
PD T + VLSACS AGLVE+G YF M++ YGI P DHY MID+ RAG+ +AK+
Sbjct: 524 PDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKN 583
Query: 434 FINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGK 493
I+ MPF A W LL+ CR HGN+++G AAE L +L P + +YVLLS++YAS G+
Sbjct: 584 VIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGR 643
Query: 494 WDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIK 553
W+ V++ R+ MR++GV+K+P CSW + +++VH+F DD P IY LEKLN +M K
Sbjct: 644 WNDVARTRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTVHPEVLSIYNYLEKLNLEMKK 703
Query: 554 EGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNA 613
GY+PD VLHD+E K L+ HSEKLA+AFGL+ +P G +RV KNLR+C DCHNA
Sbjct: 704 IGYIPDTKYVLHDMESEHKEYALSTHSEKLAVAFGLMKLPQGATVRVFKNLRICGDCHNA 763
Query: 614 TKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
K++SK+ REI+VRD RFH FKNGECSC ++W
Sbjct: 764 IKFMSKVVGREIVVRDGKRFHHFKNGECSCRNYW 797
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 123/478 (25%), Positives = 209/478 (43%), Gaps = 80/478 (16%)
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
L R +HGH++ GF + + L+D+Y K A++ FDE+P+ +++ T+IT
Sbjct: 31 LARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITAYS 90
Query: 120 RRGLVEESRRLFR--GMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
G ++ +R +F + +D++ + MITG AI+LFR MR D FTF
Sbjct: 91 ALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTF 150
Query: 178 GSVLTACGGLLALE-EGKQIHAFIIR---------------------------------- 202
SVL+A + E + Q+H +++
Sbjct: 151 ASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMAS 210
Query: 203 ------NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCS 256
K N F+ + L+ Y + + A + TM + ++W AM+ GY +G
Sbjct: 211 ARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLF 270
Query: 257 EEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS----FITV 312
E+A+ +F M+ G++ D+ T SVIS+CA+ G Q H L L ++V
Sbjct: 271 EDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSV 330
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE------------- 359
N L+T Y K G ++ + ++F EM V+D ++W L+SGY G+ E
Sbjct: 331 GNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNL 390
Query: 360 ------------------TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEI 401
+ LF +M G +P++ G ++ACS G +E GR
Sbjct: 391 LTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQ-LHA 449
Query: 402 MVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+ G MI + +R G +E A++ MPF D + W +++++ HG+
Sbjct: 450 QIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPF-VDPVSWNSMIAALGQHGH 506
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 266/688 (38%), Positives = 408/688 (59%), Gaps = 54/688 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLG----NLSRITFSTMLIMSSSRRCVDL 60
D V +N +I+G + + A+ ++ M +G + + L++ ++CV
Sbjct: 112 DTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCV-- 169
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLG----LIYDAKRGFDELPEKNIVMYNTMIT 116
Q H LK G G V + LV +Y++ L++ A++ FD++PEK+ + TM+T
Sbjct: 170 --QFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMT 227
Query: 117 GLLRRGLVEESRRLFRGMKDK-DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
G ++ G + + L +GM + +++ MI+G + GL +EA+++ R M G+ +D+F
Sbjct: 228 GYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEF 287
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRND----HKDNVFVGSALVDMYCKCKSIKYAESV 231
T+ SV+ AC L+ GKQ+HA+++R + H DN +LV +Y KC A ++
Sbjct: 288 TYPSVIRACANARLLQLGKQVHAYVLRREDFSFHFDN-----SLVTLYYKCGKFNEARAI 342
Query: 232 FRTMAWKNVVSWTAMLVGY-------------------------------GQNGCSEEAV 260
F M K++VSW A+L GY +NG EE +
Sbjct: 343 FEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGL 402
Query: 261 KIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFY 320
K+F M+R G EP D+ I SCA L + G QFH + + G S ++ NAL+T Y
Sbjct: 403 KLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMY 462
Query: 321 GKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLI 380
KCG +E++ ++F M D VSW AL++ + G E +D++E+ML G++PD +T +
Sbjct: 463 AKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFL 522
Query: 381 GVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF 440
VL+ACS AGLV++GR YF M Y I P DHY +ID+L R+G+ EA+S I +PF
Sbjct: 523 TVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPF 582
Query: 441 PPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQL 500
P A W LLS CR+HGN+E+G AA+ L L P + +Y+LLS++YA+ G+W+ V+++
Sbjct: 583 KPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARV 642
Query: 501 RRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDM 560
R+ MR++GV+K+ CSWI+ +++VH F DD S P ++ +Y L+ L ++M + GYVPD
Sbjct: 643 RKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYKYLQDLGKEMRRLGYVPDT 702
Query: 561 SSVLHDVELS-EKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISK 619
S VLHDVE K ML HSEK+A+AFGL+ +PPG IR+ KNLR C DCHN +++SK
Sbjct: 703 SFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSK 762
Query: 620 ITQREILVRDAVRFHLFKNGECSCGDFW 647
+ QR+I++RD RFH F+NGECSCG+FW
Sbjct: 763 VVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 139/491 (28%), Positives = 222/491 (45%), Gaps = 77/491 (15%)
Query: 41 SRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF 100
+R + L + R + L R +HG+I+ FGF + + + L+D+Y K + A++ F
Sbjct: 13 NRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLF 72
Query: 101 DELPEKNIVMYNTMITGLLRRGLVEESRRLFR--GMKDKDSISWTTMITGLMQNGLEREA 158
DE+ E + + TM++G G + +R +F + +D++ + MITG N A
Sbjct: 73 DEISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSA 132
Query: 159 IDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGK---QIHAFIIRNDHKDNVFVGSAL 215
I+LF +M+ EG D FT+ SVL G L +++ K Q HA +++ V +AL
Sbjct: 133 INLFCKMKHEGFKPDDFTYASVLA--GLALVVDDEKQCVQFHAAALKSGAGYVTSVSNAL 190
Query: 216 VDMYCKCKS----IKYAESVFRTMAWKNVVSWTAMLVGYGQNGC---------------- 255
V +Y +C S + A VF + K+ SWT M+ GY +NGC
Sbjct: 191 VSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMK 250
Query: 256 ----------------SEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+EA+++ M +GIE D+FT SVI +CAN L+ G Q H
Sbjct: 251 LVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHA 310
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY-------- 351
L SF N+LVT Y KCG ++ +F +M +D VSW AL+SGY
Sbjct: 311 YVLRREDFSF-HFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGE 369
Query: 352 -----------------------AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
A+ G E + LF M G +P + G + +C+
Sbjct: 370 AKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAV 429
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
G G+ + +VK G +I + ++ G +EEA+ MP D++ W
Sbjct: 430 LGAYCNGQQFHAQLVK-IGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPC-LDSVSWN 487
Query: 449 TLLSSCRIHGN 459
L+++ HG+
Sbjct: 488 ALIAALGQHGH 498
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 121/287 (42%), Gaps = 75/287 (26%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLM---------------LKDGLGNLSRITF 45
MP D VSWN L+SG+ S G + +A ++ M ++G G F
Sbjct: 346 MPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLF 405
Query: 46 STM----------LIMSSSRRCVDL-----GRQIHGHILKFGFGSYVFVGSPLVDMYAKL 90
S M + + C L G+Q H ++K GF S + G+ L+ MYAK
Sbjct: 406 SCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKC 465
Query: 91 GLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLM 150
G++ +A++ F +P + V SW +I L
Sbjct: 466 GVVEEAQQVFRTMPCLDSV-------------------------------SWNALIAALG 494
Query: 151 QNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQ-------IHAFIIRN 203
Q+G EA+D++ EM +G+ D+ TF +VLTAC +++G++ ++
Sbjct: 495 QHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGA 554
Query: 204 DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS-WTAMLVG 249
DH + L+D+ C+ AES+ ++ +K W A+L G
Sbjct: 555 DHY------ARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSG 595
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 90/213 (42%), Gaps = 31/213 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN LI+ HG +AV VY MLK G+ RITF T+L S VD
Sbjct: 478 MPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGI-RPDRITFLTVLTACSHAGLVDQ 536
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKL-------GLIYDAKRGFDELPEKNIV-MYN 112
GR+ F V+ P D YA+L G +A+ + LP K ++
Sbjct: 537 GRKY------FNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWE 590
Query: 113 TMITGLLRRGLVE----ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE 168
+++G G +E + +LF + + D ++ + G E + + MR
Sbjct: 591 ALLSGCRVHGNMELGIIAADKLFGLIPEHDG-TYMLLSNMYAATGQWEEVARVRKLMRDR 649
Query: 169 GLAMDQFTFGSVLTACGGLLALEEGKQIHAFII 201
G+ + AC +E Q+H F++
Sbjct: 650 GVKKE--------VACSW---IEMETQVHTFLV 671
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 264/604 (43%), Positives = 393/604 (65%), Gaps = 2/604 (0%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
+ T+L +R + G+Q+H HI G +++ + L+DMYAK G + DA++ FDE+
Sbjct: 122 YLTLLKFCLKQRALKEGKQVHAHIKTSG-SIGLYISNRLLDMYAKCGSLVDAEKVFDEMV 180
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
+++ +N MI+G ++ G E++R LF M ++D+ SWT +I+G +Q+ EA++L+R
Sbjct: 181 HRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRL 240
Query: 165 MRLEGLAM-DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
M+ + ++ T S L A + +L GK+IH I+R + V +L+DMY KC
Sbjct: 241 MQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCG 300
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
SI+ A +F M ++VVSWT M+ Y +NG EE +F ++ + I P+DFT V++
Sbjct: 301 SIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLN 360
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+CA+LA+ + G Q H + G SF + ++ALV Y KCG+IE++ +F + D S
Sbjct: 361 ACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFS 420
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
WT+L+ GYA+ G+ ++ + FE +L G KPD + IGVLSAC+ AGLV+KG YF +
Sbjct: 421 WTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIK 480
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
+++G+ DHY C+ID+L+RAG+ EA+S IN+MP PD WA LL CRIHGN+E+
Sbjct: 481 EKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELA 540
Query: 464 KWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSR 523
K AA+SL E++P NPA+YV L++IYAS G + +R TM +G+ K PG SWI+ +
Sbjct: 541 KRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGMSWIEIRRE 600
Query: 524 VHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKL 583
VH+FS D S P S +I L +L+++M + GYVPD + VLHDVEL +K + L++HSEKL
Sbjct: 601 VHVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFVLHDVELEQKEENLSYHSEKL 660
Query: 584 AIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSC 643
A+AFG++ P G PI+V KNLR C DCHNA K+IS IT R+I+VRD+ RFH F+ G CSC
Sbjct: 661 AVAFGIISTPSGTPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFHCFEGGSCSC 720
Query: 644 GDFW 647
D+W
Sbjct: 721 KDYW 724
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 114/352 (32%), Positives = 179/352 (50%), Gaps = 33/352 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SW +ISG H +A+++Y LM K ++ T S+ L S++ + +
Sbjct: 210 MPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHM 269
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G++IHGHI++ G S V L+DMY K G I +A+ FD++ E+++V + TMI L+
Sbjct: 270 GKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLK 329
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G EE LFR + M + +M N FTF V
Sbjct: 330 NGRREEGFALFRHL----------MNSNIMPN---------------------DFTFAGV 358
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L A + GKQIHA+++R SALV MY KC I+ A+SVF + ++
Sbjct: 359 LNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDL 418
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
SWT++LVGY Q+G ++A+ F + ++G +PD V+S+CA+ +++G + FH
Sbjct: 419 FSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHS 478
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
GL I ++ + G ++ + NEM ++ D+ W AL+ G
Sbjct: 479 IKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGG 530
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 256/643 (39%), Positives = 395/643 (61%), Gaps = 32/643 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +SWN +I+GHA HGS A K++ M + L ITF+++L + ++LG+QI
Sbjct: 496 DVISWNSMIAGHAQHGSYETAYKLFQEMQNEEL-EPDNITFASVLSGCKNPEALELGKQI 554
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG I + G V +G+ L++MY + G + DA
Sbjct: 555 HGRITESGLQLDVNLGNALINMYIRCGSLQDA---------------------------- 586
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
R +F ++ +D +SWT MI G G + +AI+LF +M+ EG + TF S+L C
Sbjct: 587 ---RNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVC 643
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L+EGK++ A+I+ + ++ + VG+AL+ Y K S+ A VF M +++VSW
Sbjct: 644 TSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWN 703
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++ GY QNG + AV+ MQ + P+ F+ S++++C++ ++LEEG + H +
Sbjct: 704 KIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKR 763
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
L + V AL++ Y KCG+ ++ +F+ + ++ V+W A+++ YA+ G A++ + F
Sbjct: 764 KLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFF 823
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
M G+KPD T +LSAC+ AGLV +G F M EYG+ P +HY C++ +L R
Sbjct: 824 NCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGR 883
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
A R +EA++ IN+MPFPPDA W TLL +CRIHGN+ + + AA + L+L+ NPA Y+LL
Sbjct: 884 ARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILL 943
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S++YA+ G+WD V+++RR M +G+RK+PG SWI+ + +H F A D S P + +IYAEL
Sbjct: 944 SNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAEL 1003
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
++L+ +M + GY PD VLHD+ + + L HSE+LAIA+GL+ PPG PIR+ KNL
Sbjct: 1004 KRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNL 1063
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R+C DCH A+K+ISK+ REI+ RD+ RFH FKNG+CSC D+W
Sbjct: 1064 RICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 1106
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 152/510 (29%), Positives = 265/510 (51%), Gaps = 46/510 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V +N LI+ A HG +A + Y M DG+ L+R T+ ++L S+ + ++ G+ I
Sbjct: 294 DVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVA-LNRTTYLSILNACSTSKALEAGKLI 352
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H HI + G S V +G+ L+ MYA+ G +LP+
Sbjct: 353 HSHISEDGHSSDVQIGNALISMYARCG----------DLPK------------------- 383
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+R LF M +D ISW +I G + EA+ L+++M+ EG+ + TF +L+AC
Sbjct: 384 --ARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSAC 441
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
A +GK IH I+R+ K N + +AL++MY +C S+ A++VF ++V+SW
Sbjct: 442 ANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWN 501
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
+M+ G+ Q+G E A K+F MQ +EPD+ T SV+S C N +LE G Q HGR +
Sbjct: 502 SMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITES 561
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
GL + + NAL+ Y +CG+++D+ +F+ + RD +SWTA++ G A G+ + I+LF
Sbjct: 562 GLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELF 621
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+M + G +P + T +L C+ + +++G+ ++ G +I S+
Sbjct: 622 WQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNS-GYELDTGVGNALISAYSK 680
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN--PASYV 482
+G + +A+ +KMP D + W +++ +G +G+ A E ++ + P +
Sbjct: 681 SGSMTDAREVFDKMP-SRDIVSWNKIIAGYAQNG---LGQTAVEFAYQMQEQDVVPNKFS 736
Query: 483 LLSSIYA-------SKGKWDHVSQLRRTMR 505
+S + A +GK H ++R ++
Sbjct: 737 FVSLLNACSSFSALEEGKRVHAEIVKRKLQ 766
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 235/454 (51%), Gaps = 34/454 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VS+N ++ +A V + + ++ M +G+ + ++T+ +L ++ +D G++I
Sbjct: 193 DVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGI-SPDKVTYINLLDAFTTPSMLDEGKRI 251
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H ++ G S + VG+ LV M +R G V
Sbjct: 252 HKLTVEEGLNSDIRVGTALVTM-------------------------------CVRCGDV 280
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ +++ F+G D+D + + +I L Q+G EA + + MR +G+A+++ T+ S+L AC
Sbjct: 281 DSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNAC 340
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
ALE GK IH+ I + H +V +G+AL+ MY +C + A +F TM ++++SW
Sbjct: 341 STSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWN 400
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
A++ GY + EA++++ MQ G++P T ++S+CAN ++ +G H L +
Sbjct: 401 AIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS 460
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G+ S ++NAL+ Y +CG++ ++ +F RD +SW ++++G+A+ G LF
Sbjct: 461 GIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLF 520
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
++M + L+PD +T VLS C +E G+ + E G++ + +I++ R
Sbjct: 521 QEMQNEELEPDNITFASVLSGCKNPEALELGKQ-IHGRITESGLQLDVNLGNALINMYIR 579
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
G L++A++ + + D + W ++ C G
Sbjct: 580 CGSLQDARNVFHSLQH-RDVMSWTAMIGGCADQG 612
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 131/479 (27%), Positives = 238/479 (49%), Gaps = 36/479 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D +SWN LIS +A G A +++ M G ++IT+ ++L S ++
Sbjct: 88 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIP-NKITYISILTACYSPAELEN 146
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G++IH I+K G+ V + L+ MY K G + A++ F + +++V YNTM+ +
Sbjct: 147 GKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQ 206
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ V +E + LF +M EG++ D+ T+ ++
Sbjct: 207 KAYV-------------------------------KECLGLFGQMSSEGISPDKVTYINL 235
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A L+EGK+IH + ++ VG+ALV M +C + A+ F+ A ++V
Sbjct: 236 LDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDV 295
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V + A++ Q+G + EA + + M+ +G+ + T S++++C+ +LE G H
Sbjct: 296 VVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSH 355
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
G S + + NAL++ Y +CG++ + LF M RD +SW A+++GYA+ E
Sbjct: 356 ISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEA 415
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ L+++M S G+KP VT + +LSAC+ + G+ E +++ GI+ +++
Sbjct: 416 MRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS-GIKSNGHLANALMN 474
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL--ELDPYN 477
+ R G L EA++ D I W ++++ HG+ E + + EL+P N
Sbjct: 475 MYRRCGSLMEAQNVFEGTQ-ARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDN 532
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 201/411 (48%), Gaps = 33/411 (8%)
Query: 42 RITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFD 101
R T+ +L + +R + ++IH +++ G +F+ + L++MY K + DA + F
Sbjct: 27 RATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFK 86
Query: 102 ELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDL 161
E+P + D ISW ++I+ Q G +++A L
Sbjct: 87 EMPRR-------------------------------DVISWNSLISCYAQQGFKKKAFQL 115
Query: 162 FREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK 221
F EM+ G ++ T+ S+LTAC LE GK+IH+ II+ ++ + V ++L+ MY K
Sbjct: 116 FEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGK 175
Query: 222 CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
C + A VF ++ ++VVS+ ML Y Q +E + +F M GI PD T ++
Sbjct: 176 CGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINL 235
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE 341
+ + + L+EG + H ++ GL S I V ALVT +CG+++ + + F RD
Sbjct: 236 LDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDV 295
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEI 401
V + AL++ A+ G E + + +M S G+ + T + +L+ACS + +E G+
Sbjct: 296 VVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGK-LIHS 354
Query: 402 MVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ E G +I + +R G L +A+ MP D I W +++
Sbjct: 355 HISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMP-KRDLISWNAIIA 404
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 161/290 (55%), Gaps = 3/290 (1%)
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
++ T+ ++L C L E K+IHA ++ ++F+ + L++MY KC+S+ A VF
Sbjct: 26 ERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVF 85
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
+ M ++V+SW +++ Y Q G ++A ++F MQ G P+ T S++++C + A LE
Sbjct: 86 KEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELE 145
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
G + H + + G V N+L++ YGKCG++ + ++F ++ RD VS+ ++ YA
Sbjct: 146 NGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYA 205
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
+ E + LF +M S G+ PD+VT I +L A + ++++G+ ++ V+E G+
Sbjct: 206 QKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEE-GLNSDI 264
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG-NVE 461
T ++ + R G ++ AK K D + + L+++ HG NVE
Sbjct: 265 RVGTALVTMCVRCGDVDSAKQAF-KGTADRDVVVYNALIAALAQHGHNVE 313
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 92/173 (53%), Gaps = 7/173 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVK-VYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
MP D VSWN +I+G+A +G AV+ Y + +D + N + +F ++L SS ++
Sbjct: 694 MPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPN--KFSFVSLLNACSSFSALE 751
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G+++H I+K V VG+ L+ MYAK G +A+ FD + EKN+V +N MI
Sbjct: 752 EGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYA 811
Query: 120 RRGLVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLE 168
+ GL ++ F M+ + D ++T++++ GL E +F M E
Sbjct: 812 QHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESE 864
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 119/260 (45%), Gaps = 5/260 (1%)
Query: 255 CSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSN 314
C + + Q E + T +++ +C L E + H + + + I +SN
Sbjct: 7 CGPDREDVSNTHQPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSN 66
Query: 315 ALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKP 374
L+ Y KC ++ D+H++F EM RD +SW +L+S YA+ G + LFE+M + G P
Sbjct: 67 LLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIP 126
Query: 375 DEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSF 434
+++T I +L+AC +E G+ ++K G + ++ + + G L A+
Sbjct: 127 NKITYISILTACYSPAELENGKKIHSQIIKA-GYQRDPRVQNSLLSMYGKCGDLPRARQV 185
Query: 435 INKMPFPPDAIGWATLLSSCRIHGNVE--IGKWAAESLLELDPYNPASYVLLSSIYASKG 492
+ P D + + T+L V+ +G + S + P + +Y+ L + +
Sbjct: 186 FAGIS-PRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISP-DKVTYINLLDAFTTPS 243
Query: 493 KWDHVSQLRRTMREKGVRKD 512
D ++ + E+G+ D
Sbjct: 244 MLDEGKRIHKLTVEEGLNSD 263
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 255/641 (39%), Positives = 408/641 (63%), Gaps = 32/641 (4%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V WNL++ + + + +++ M G+ + ++ T+ +L + ++LG QIH
Sbjct: 312 VLWNLMLVAYGQISDLAKSFEIFGQMQATGI-HPNQFTYPCILRTCTCTGQIELGEQIHS 370
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+K GF S ++V L+DMY+K G + ++
Sbjct: 371 LSIKNGFESDMYVSGVLIDMYSKYGCL-------------------------------DK 399
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+R++ ++ +D +SWT+MI G +Q+ EA+ F+EM+ G+ D S +AC G
Sbjct: 400 ARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAG 459
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+ A+ +G QIHA + + + ++ + + LV++Y +C + A S+FR + K+ ++W +
Sbjct: 460 IKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGL 519
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ G+GQ+ ++A+ +F M + G + + FT S IS+ ANLA +++G Q HGR++ TG
Sbjct: 520 ISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGH 579
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
S V+NAL++ YGKCG+IED+ +F+EM++R+EVSW +++ ++ G+ E +DLF++
Sbjct: 580 TSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQ 639
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M GLKP++VT IGVL+ACS GLVE+G YF+ M YG+ PI DHY C++DIL RAG
Sbjct: 640 MKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAG 699
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+L+ A+ F+++MP +A+ W TLLS+C++H N+EIG+ AA+ LLEL+P++ ASYVLLS+
Sbjct: 700 QLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSN 759
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
YA GKW + Q+R+ M+++G+RK+PG SWI+ K+ VH F D P SDQIY L +
Sbjct: 760 AYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSE 819
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
LN ++ K GY + ++ H+ E +K HSEKLA+AFGL+ +PP +P+RV+KNLRV
Sbjct: 820 LNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRV 879
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCH+ K S++T+REI++RD RFH F +G CSCGD+W
Sbjct: 880 CDDCHSWMKCTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 234/459 (50%), Gaps = 36/459 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M F D V++N LISGHA G A+++++ M GL +T +++L +S +
Sbjct: 205 MLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGL-RPDCVTVASLLAACASVGDLQK 263
Query: 61 GRQIHGHILKFGFG-SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G+Q+H ++LK G Y+ GS L+D+Y K G I A F+ N+V++N M L+
Sbjct: 264 GKQLHSYLLKAGMSFDYITEGS-LLDLYVKCGDIETAHDIFNLGDRTNVVLWNLM---LV 319
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
G + + + F ++F +M+ G+ +QFT+
Sbjct: 320 AYGQISDLAKSF----------------------------EIFGQMQATGIHPNQFTYPC 351
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L C +E G+QIH+ I+N + +++V L+DMY K + A + + ++
Sbjct: 352 ILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRD 411
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VVSWT+M+ GY Q+ EEA+ F MQ G+ PD+ L S S+CA + ++ +G Q H
Sbjct: 412 VVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHA 471
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
R V+G + I++ N LV Y +CG E++ LF E+ +DE++W L+SG+ + +
Sbjct: 472 RVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQ 531
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ +F KM G K + T I +SA + +++G+ VK G + +I
Sbjct: 532 ALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKT-GHTSETEVANALI 590
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ + G +E+AK ++M + + W T+++SC HG
Sbjct: 591 SLYGKCGSIEDAKMIFSEMSL-RNEVSWNTIITSCSQHG 628
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 132/453 (29%), Positives = 214/453 (47%), Gaps = 44/453 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW ++SG+A G +A ++Y+ M + + S++L + + GR I
Sbjct: 108 DHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYV-LSSVLSACTKGKLFAQGRMI 166
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H + K F S FVG+ L+ +Y GF G
Sbjct: 167 HAQVYKQAFCSETFVGNALIALYL----------GF---------------------GSF 195
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ + R+F M D +++ T+I+G Q G A+ +F EM+L GL D T S+L AC
Sbjct: 196 KLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAAC 255
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+ L++GKQ+H+++++ + +L+D+Y KC I+ A +F NVV W
Sbjct: 256 ASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWN 315
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
MLV YGQ ++ +IF MQ GI P+ FT ++ +C +E G Q H S+
Sbjct: 316 LMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKN 375
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G S + VS L+ Y K G ++ + ++ + RD VSWT++++GY + E + F
Sbjct: 376 GFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATF 435
Query: 365 EKMLSHGLKPDEVTLIGVLSACS-----RAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
++M G+ PD + L SAC+ R GL R Y + I + ++
Sbjct: 436 KEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISI------WNTLV 489
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
++ +R GR EEA S ++ D I W L+S
Sbjct: 490 NLYARCGRSEEAFSLFREIEH-KDEITWNGLIS 521
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 197/392 (50%), Gaps = 37/392 (9%)
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
+IH + G G+ +G+ L+D+YAK GL++ A
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQA-------------------------- 97
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
R++F+ + +D +SW M++G Q+GL +EA L+ +M + + SVL+
Sbjct: 98 -----RQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLS 152
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
AC +G+ IHA + + FVG+AL+ +Y S K AE VF M + + V+
Sbjct: 153 ACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVT 212
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL 302
+ ++ G+ Q G E A++IF MQ +G+ PD T+ S++++CA++ L++G Q H L
Sbjct: 213 FNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLL 272
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
G+ +L+ Y KCG+IE +H +FN + + V W ++ Y + ++ +
Sbjct: 273 KAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFE 332
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT--CMID 420
+F +M + G+ P++ T +L C+ G +E G + +K G D Y +ID
Sbjct: 333 IFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKN-GFES--DMYVSGVLID 389
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ S+ G L++A+ + +M D + W ++++
Sbjct: 390 MYSKYGCLDKARKIL-EMLEKRDVVSWTSMIA 420
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 266/647 (41%), Positives = 397/647 (61%), Gaps = 32/647 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VSWN +I+G H + A+K+ M + S T S+ L ++ V L
Sbjct: 249 IPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAP-SMFTLSSALKACAAIGLVKL 307
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H ++K FVG L+DMY+K GL+ DA+ FD +P K+++++N+
Sbjct: 308 GRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNS------- 360
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+I+G G + EA+ LF M EGL +Q T ++
Sbjct: 361 ------------------------IISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTI 396
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L + G A +Q+H I++ ++ + +V ++L+D Y KC ++ A VF +++
Sbjct: 397 LKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDL 456
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V++T+M+ Y Q G EEA+K++ MQ I+PD F S+ ++CANL++ E+G Q H
Sbjct: 457 VAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVH 516
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
L GL+S + N+LV Y KCG+I+D+ +FNE++ R VSW+A++ G A+ G +
Sbjct: 517 VLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKA 576
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LF +ML +G+ P+ +TL+ VLSAC+ AGLV + R +F +M K +GI P +HY CM+D
Sbjct: 577 LQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVD 636
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
IL R GRL+EA + +MPF A W LL + RIH N+E+G+ AAE LL L+P +
Sbjct: 637 ILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGT 696
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
++LL++IYAS G WD+V+++RR+M+ V+K+PG SWI+ K +V+ F D S P S +I
Sbjct: 697 HILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEI 756
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y +L+ L ++ GYVP + + LHDVE EK ++L HHSEKLA+AFGL+ PPG PIRV
Sbjct: 757 YVKLDDLRERLTSAGYVPMIETDLHDVEQIEKEQLLWHHSEKLAVAFGLIATPPGAPIRV 816
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCH A K+ISK+ REI+VRD RFH F++G CSCGD+W
Sbjct: 817 KKNLRVCIDCHTAFKFISKVASREIIVRDINRFHHFRDGSCSCGDYW 863
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 218/462 (47%), Gaps = 45/462 (9%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
+ +L+ ++ + V G IH I++ + + + LV++Y+K A++ +
Sbjct: 53 YPKLLLQFTASKDVSSGMAIHARIIRL---GLLGLRNRLVNLYSKCQCFRVARKLVIDSS 109
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGM----KDKDSISWTTMITGL-----MQNGLE 155
E ++V ++ +I+G ++ G EE+ + M + ++++++ G ++ G +
Sbjct: 110 EPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQ 169
Query: 156 REAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSAL 215
+ L EM G++ ++F+ +VL AC GL G ++H ++I+ + + F +AL
Sbjct: 170 IHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANAL 229
Query: 216 VDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDD 275
+DMY K + A +VF + ++VSW A++ G + ++ A+K+ M + P
Sbjct: 230 LDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSM 289
Query: 276 FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNE 335
FTL S + +CA + ++ G Q H + + V L+ Y KCG ++D+ +F+
Sbjct: 290 FTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDL 349
Query: 336 MNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVL--SACSRA-GLV 392
M +D + W +++SGY+ G E + LF M GL+ ++ TL +L +A S+A G
Sbjct: 350 MPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFC 409
Query: 393 EK--------GRHY-----------------FEIMVKEYGIRPIHD--HYTCMIDILSRA 425
E+ G Y E K + + P D YT MI S+
Sbjct: 410 EQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQY 469
Query: 426 GRLEEAKSFINKMP---FPPDAIGWATLLSSCRIHGNVEIGK 464
G EEA +M PDA +++L ++C E GK
Sbjct: 470 GLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGK 511
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 283/691 (40%), Positives = 400/691 (57%), Gaps = 50/691 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + S++ LI + + A+ ++ ML GL +R+ + S+ + C L
Sbjct: 74 VPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRV------LPSAVKACAGL 127
Query: 61 -----GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
RQ+HG GF S FV S LV MY K I DA R FD + E ++V ++ ++
Sbjct: 128 SALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALV 187
Query: 116 TGLLRRGLVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLEGLA 171
R+G V+E++RLF M D + ISW MI G +GL EA+ +F +M L G
Sbjct: 188 AAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFE 247
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
D T SVL A G L L G IH ++I+ + V SAL+DMY KC V
Sbjct: 248 PDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQV 307
Query: 232 FRTMAWK-----------------------------------NVVSWTAMLVGYGQNGCS 256
F M NVVSWT+M+ QNG
Sbjct: 308 FDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRD 367
Query: 257 EEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNAL 316
EA+++F MQ G++P+ T+ ++ +C N+A+L G H SL G+ + + V +AL
Sbjct: 368 IEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSAL 427
Query: 317 VTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDE 376
+ Y KCG I+ S F+ + ++ V W A+++GYA GKA E +++F+ M G KPD
Sbjct: 428 IDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDI 487
Query: 377 VTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFIN 436
++ VLSACS++GL E+G +YF M +YGI +HY CM+ +LSRAG+LE+A + I
Sbjct: 488 ISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIR 547
Query: 437 KMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDH 496
+MP PDA W LLSSCR+H NV +G+ AAE L EL+P NP +Y+LLS+IYASKG W+
Sbjct: 548 RMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNE 607
Query: 497 VSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGY 556
V+++R M+ KG+RK+PGCSWI+ K++VH+ A D S P QI +L+KL+ +M K GY
Sbjct: 608 VNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGY 667
Query: 557 VPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKY 616
P+++ VL DVE +K ++L HSEKLA+ FGLL PPG P++V+KNLR+C DCH K+
Sbjct: 668 FPEINFVLQDVEEQDKEQILCGHSEKLAVVFGLLNTPPGYPLQVIKNLRICGDCHVVIKF 727
Query: 617 ISKITQREILVRDAVRFHLFKNGECSCGDFW 647
IS +REI VRD RFH FK G CSCGD+W
Sbjct: 728 ISSFERREIFVRDTNRFHHFKEGACSCGDYW 758
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 126/501 (25%), Positives = 208/501 (41%), Gaps = 111/501 (22%)
Query: 35 DGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIY 94
L L + + ++S+ + RQ H HILK G + + + L+ YA
Sbjct: 6 QALALLDSVQHTIFNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFA 65
Query: 95 DAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGL 154
DA D +PE N+ S++T+I +
Sbjct: 66 DATLVLDLVPEPNV-------------------------------FSFSTLIYAFSKFHQ 94
Query: 155 EREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSA 214
A+ F +M GL D S + AC GL AL+ +Q+H + + FV S+
Sbjct: 95 FHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSS 154
Query: 215 LVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSE----------------- 257
LV MY KC I+ A VF M +VVSW+A++ Y + GC +
Sbjct: 155 LVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPN 214
Query: 258 ------------------EAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
EAV +F +M G EPD T+ SV+ + +L L G HG
Sbjct: 215 LISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHG 274
Query: 300 RSLVTGLISFITVSNALVTFYGKC-------------------------------GNIED 328
+ GL+S VS+AL+ YGKC G +E
Sbjct: 275 YVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVES 334
Query: 329 SHRLFNEMNVR----DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
S RLF ++ + + VSWT++++ ++ G+ E ++LF +M G+KP+ VT+ +L
Sbjct: 335 SLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLP 394
Query: 385 ACSRAGLVEKGR--HYFEIMVKEYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPF 440
AC + G+ H F + GI D Y + +ID+ ++ GR++ ++ + +P
Sbjct: 395 ACGNIAALMHGKAAHCFSL---RRGIST--DVYVGSALIDMYAKCGRIQASRICFDGIP- 448
Query: 441 PPDAIGWATLLSSCRIHGNVE 461
+ + W +++ +HG +
Sbjct: 449 TKNLVCWNAVIAGYAMHGKAK 469
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 4/186 (2%)
Query: 281 VISSCAN--LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
I +C N ASL + Q H L TGL + ++ L++ Y D+ + + +
Sbjct: 17 TIFNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPE 76
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
+ S++ L+ ++KF + + + F +ML+ GL PD L + AC+ ++ R
Sbjct: 77 PNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQV 136
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
I G + ++ + + ++ +A ++M F PD + W+ L+++ G
Sbjct: 137 HGI-ASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRM-FEPDVVSWSALVAAYARQG 194
Query: 459 NVEIGK 464
V+ K
Sbjct: 195 CVDEAK 200
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 276/648 (42%), Positives = 396/648 (61%), Gaps = 19/648 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLML-KDGLGNLSRITFSTMLIMSSSRRCVD 59
MP D V++N++IS HA+HG V+ A ++L KD ++++ ML V+
Sbjct: 126 MPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDA------VSWNGMLAAYVRNGRVE 179
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
R + ++ S+ + L+ Y + G + +A+ FD +P +++V +N M++G
Sbjct: 180 EARGLFNSRTEWDVISW----NALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYA 235
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
RRG + E+RRLF +D +WT +++G QNG+ EA +F M + ++ +
Sbjct: 236 RRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNA 291
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
++ A ++E K++ + NV + ++ Y + ++ A++VF TM K+
Sbjct: 292 MVAAYIQRRMMDEAKELFNMMPCR----NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKD 347
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VSW AML Y Q GCSEE +++F M R G + V+S+CA++A+LE G Q HG
Sbjct: 348 AVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHG 407
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
R + G V NAL+ Y KCGN+ED+ F EM RD VSW +++GYA+ G E
Sbjct: 408 RLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKE 467
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+++F+ M + KPD++TL+GVL+ACS +GLVEKG YF M ++G+ +HYTCMI
Sbjct: 468 ALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMI 527
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L RAGRL EA + MPF PD+ W LL + RIH N E+G+ AAE + EL+P N
Sbjct: 528 DLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAG 587
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
YVLLS+IYAS GKW ++R M E+GV+K PG SWI+ +++VH FSA D P ++
Sbjct: 588 MYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEK 647
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IYA LE L+ +M K GYV VLHDVE EK ML +HSEKLA+A+G+L IPPG PIR
Sbjct: 648 IYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIR 707
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V+KNLRVC DCHNA KYIS I R IL+RD+ RFH F+ G CSCGD+W
Sbjct: 708 VIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 215/461 (46%), Gaps = 34/461 (7%)
Query: 10 NLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHIL 69
N I+ H G V DA +++ M + S T++ ML S+ + L + I
Sbjct: 42 NKAITAHMRAGRVADAERLFAAMPRR-----STSTYNAMLAGYSANGRLPLAASLFRAIP 96
Query: 70 KFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRR 129
+ SY + L+ A + DA+ FDE+P ++ V YN MI+ GLV +R
Sbjct: 97 RPDNYSY----NTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARH 152
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
F +KD++SW M+ ++NG EA LF R E D ++ ++++
Sbjct: 153 YFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNS-RTE---WDVISWNALMSGYVQWGK 208
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
+ E +++ + D V + +V Y + + A +F ++V +WTA++ G
Sbjct: 209 MSEARELFDRMPGRD----VVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSG 264
Query: 250 YGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
Y QNG EEA ++F M +RN + + +++++ ++E + + S
Sbjct: 265 YAQNGMLEEARRVFDAMPERNAV-----SWNAMVAAYIQRRMMDEAKELFNMMPCRNVAS 319
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
+ N ++T Y + G +E++ +F+ M +D VSW A+++ Y++ G + ET+ LF +M
Sbjct: 320 W----NTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMG 375
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE-YGIRPIHDHYTCMIDILSRAGR 427
G + VLS C+ +E G +++ YG+ + ++ + + G
Sbjct: 376 RCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGN--ALLAMYFKCGN 433
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
+E+A++ +M D + W T+++ HG GK A E
Sbjct: 434 MEDARNAFEEME-ERDVVSWNTMIAGYARHG---FGKEALE 470
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 164/352 (46%), Gaps = 32/352 (9%)
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
E ++ N IT +R G V ++ RLF M + + ++ M+ G NG A LFR
Sbjct: 35 EPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRA 94
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQI-HAFIIRNDHKDNVFVGSALVDMYCKCK 223
+ D +++ ++L A +L + + + +R+ NV + S +
Sbjct: 95 IPRP----DNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISS-----HANHG 145
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
+ A F K+ VSW ML Y +NG EEA +F + E D + +++S
Sbjct: 146 LVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF----NSRTEWDVISWNALMS 201
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+ E + R ++S+ N +V+ Y + G++ ++ RLF+ VRD +
Sbjct: 202 GYVQWGKMSEARELFDRMPGRDVVSW----NIMVSGYARRGDMVEARRLFDAAPVRDVFT 257
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
WTA+VSGYA+ G E +F+ M + V+ +++A + ++++ + F +M
Sbjct: 258 WTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKELFNMM- 312
Query: 404 KEYGIRPIHD--HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
P + + M+ ++AG LEEAK+ + MP DA+ WA +L++
Sbjct: 313 ------PCRNVASWNTMLTGYAQAGMLEEAKAVFDTMP-QKDAVSWAAMLAA 357
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 261/691 (37%), Positives = 413/691 (59%), Gaps = 52/691 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLG----NLSRITFSTMLIMSSSRRCVDL 60
D V +N +I+G+A +G + A++++ M +D + + + +L + + ++C
Sbjct: 111 DSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQC--- 167
Query: 61 GRQIHGHILKFGFGSYVF-VGSPLVDMYAK----LGL----IYDAKRGFDELPEKNIVMY 111
Q+H ++K G G V + L+ +Y K LG+ + A++ FDE+P+++ + +
Sbjct: 168 -GQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTW 226
Query: 112 NTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLA 171
TMITG +R + +R +F M + +W MI+G + G +EA+ L R+MR G+
Sbjct: 227 TTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQ 286
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDN----VFVGSALVDMYCKCKSIKY 227
D T+ ++++AC + + + GKQ+HA+I++N+ N + V +AL+ +YCK +
Sbjct: 287 FDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDE 346
Query: 228 AESVFRTMAWKNVVSWTAMLVGY-------------------------------GQNGCS 256
A +F M +N+++W A+L GY QNG
Sbjct: 347 ARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFG 406
Query: 257 EEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNAL 316
+E +K+F M+ +G EP DF +++C+ L +LE G Q H + + G S ++V NA+
Sbjct: 407 DEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAM 466
Query: 317 VTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDE 376
++ Y KCG +E + +F M D VSW ++++ + G + I+LF++ML G+ PD
Sbjct: 467 ISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDR 526
Query: 377 VTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFIN 436
+T + VL+ACS AGLVEKGRHYF M++ YGI P DHY M+D+ RAG A+ I+
Sbjct: 527 ITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVID 586
Query: 437 KMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDH 496
MP P A W LL+ CRIHGN+++G AAE L +L P N +YVLLS+IYA G+W+
Sbjct: 587 SMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNE 646
Query: 497 VSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGY 556
V+++R+ MR++ VRK+P CSWI+ +++VH+F DD P +Y LE+L +M K GY
Sbjct: 647 VAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGY 706
Query: 557 VPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKY 616
+PD VLHD+E +K L+ HSEKLA+ FG++ +PPG +RV KN+R+C DCHNA K+
Sbjct: 707 IPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPGATVRVFKNIRICGDCHNAFKF 766
Query: 617 ISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+SK+ +REI+VRD RFH FKNG+CSC D+W
Sbjct: 767 MSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 132/478 (27%), Positives = 221/478 (46%), Gaps = 80/478 (16%)
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
L R +H H++ GF + L++MY K + A++ F+E+P + + T+IT
Sbjct: 31 LARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITAYC 90
Query: 120 RRGLVEESRRLFRG--MKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
G +E R +F G + +DS+ + MITG NG A++LFR MR + D FTF
Sbjct: 91 ALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTF 150
Query: 178 GSVLTACGGLLALEEG-KQIHAFIIRNDHK-DNVFVGSALVDMYCK--------CKSIKY 227
SVL+A + E+ Q+H +++ + V +AL+ +Y K C ++
Sbjct: 151 TSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVS 210
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQN-------------------------------GCS 256
A +F M ++ ++WT M+ GY +N GC
Sbjct: 211 ARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCF 270
Query: 257 EEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI---SF-ITV 312
+EA+ + M+ GI+ DD T ++IS+CAN+ S + G Q H L L SF ++V
Sbjct: 271 QEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSV 330
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK---------------- 356
SNAL+T Y K ++++ ++F M VR+ ++W A++SGY G+
Sbjct: 331 SNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNL 390
Query: 357 ---------------ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEI 401
+E + LF++M G +P + G L+ACS G +E GR
Sbjct: 391 LTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQ 450
Query: 402 MVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+V G MI + ++ G +E A+S MP D + W +++++ HG+
Sbjct: 451 LV-HLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMP-SVDLVSWNSMIAALGQHGH 506
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 9/145 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN +I+ HG A+++++ MLK+G+ RITF T+L S V+
Sbjct: 486 MPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFP-DRITFLTVLTACSHAGLVEK 544
Query: 61 GRQIHGHILK-FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEK------NIVMYNT 113
GR +L+ +G + +VD++ + G+ A+ D +P K ++
Sbjct: 545 GRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGC 604
Query: 114 MITGLLRRGLVEESRRLFRGMKDKD 138
I G + G +E + +LF+ M D
Sbjct: 605 RIHGNMDLG-IEAAEQLFKLMPQND 628
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 276/648 (42%), Positives = 396/648 (61%), Gaps = 19/648 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLML-KDGLGNLSRITFSTMLIMSSSRRCVD 59
MP D V++N++IS HA+HG V+ A ++L KD ++++ ML V+
Sbjct: 126 MPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDA------VSWNGMLAAYVRNGRVE 179
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
R + ++ S+ + L+ Y + G + +A+ FD +P +++V +N M++G
Sbjct: 180 EARGLFNSRTEWDAISW----NALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYA 235
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
RRG + E+RRLF +D +WT +++G QNG+ EA +F M + ++ +
Sbjct: 236 RRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNA 291
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
++ A ++E K++ + NV + ++ Y + ++ A++VF TM K+
Sbjct: 292 MVAAYIQRRMMDEAKELFNMMPCR----NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKD 347
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VSW AML Y Q GCSEE +++F M R G + V+S+CA++A+LE G Q HG
Sbjct: 348 AVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHG 407
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
R + G V NAL+ Y KCGN+ED+ F EM RD VSW +++GYA+ G E
Sbjct: 408 RLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKE 467
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+++F+ M + KPD++TL+GVL+ACS +GLVEKG YF M ++G+ +HYTCMI
Sbjct: 468 ALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMI 527
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L RAGRL EA + MPF PD+ W LL + RIH N E+G+ AAE + EL+P N
Sbjct: 528 DLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAG 587
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
YVLLS+IYAS GKW ++R M E+GV+K PG SWI+ +++VH FSA D P ++
Sbjct: 588 MYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEK 647
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IYA LE L+ +M K GYV VLHDVE EK ML +HSEKLA+A+G+L IPPG PIR
Sbjct: 648 IYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIR 707
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V+KNLRVC DCHNA KYIS I R IL+RD+ RFH F+ G CSCGD+W
Sbjct: 708 VIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 215/461 (46%), Gaps = 34/461 (7%)
Query: 10 NLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHIL 69
N I+ H G V DA +++ M + S T++ ML S+ + L + I
Sbjct: 42 NKAITAHMRAGRVADAERLFAAMPRR-----STSTYNAMLAGYSANGRLPLAASLFRAIP 96
Query: 70 KFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRR 129
+ SY + L+ A + DA+ FDE+P ++ V YN MI+ GLV +R
Sbjct: 97 RPDNYSY----NTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARH 152
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
F +KD++SW M+ ++NG EA LF R E D ++ ++++
Sbjct: 153 YFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNS-RTE---WDAISWNALMSGYVQWGK 208
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
+ E +++ + D V + +V Y + + A +F ++V +WTA++ G
Sbjct: 209 MSEARELFDRMPGRD----VVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSG 264
Query: 250 YGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
Y QNG EEA ++F M +RN + + +++++ ++E + + S
Sbjct: 265 YAQNGMLEEARRVFDAMPERNAV-----SWNAMVAAYIQRRMMDEAKELFNMMPCRNVAS 319
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
+ N ++T Y + G +E++ +F+ M +D VSW A+++ Y++ G + ET+ LF +M
Sbjct: 320 W----NTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMG 375
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE-YGIRPIHDHYTCMIDILSRAGR 427
G + VLS C+ +E G +++ YG+ + ++ + + G
Sbjct: 376 RCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGN--ALLAMYFKCGN 433
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
+E+A++ +M D + W T+++ HG GK A E
Sbjct: 434 MEDARNAFEEME-ERDVVSWNTMIAGYARHG---FGKEALE 470
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 164/352 (46%), Gaps = 32/352 (9%)
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
E ++ N IT +R G V ++ RLF M + + ++ M+ G NG A LFR
Sbjct: 35 EPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRA 94
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQI-HAFIIRNDHKDNVFVGSALVDMYCKCK 223
+ D +++ ++L A +L + + + +R+ NV + S +
Sbjct: 95 IPRP----DNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISS-----HANHG 145
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
+ A F K+ VSW ML Y +NG EEA +F + E D + +++S
Sbjct: 146 LVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF----NSRTEWDAISWNALMS 201
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+ E + R ++S+ N +V+ Y + G++ ++ RLF+ VRD +
Sbjct: 202 GYVQWGKMSEARELFDRMPGRDVVSW----NIMVSGYARRGDMVEARRLFDAAPVRDVFT 257
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
WTA+VSGYA+ G E +F+ M + V+ +++A + ++++ + F +M
Sbjct: 258 WTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKELFNMM- 312
Query: 404 KEYGIRPIHD--HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
P + + M+ ++AG LEEAK+ + MP DA+ WA +L++
Sbjct: 313 ------PCRNVASWNTMLTGYAQAGMLEEAKAVFDTMP-QKDAVSWAAMLAA 357
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 274/647 (42%), Positives = 395/647 (61%), Gaps = 17/647 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V++N++IS HA+HG V+ A ++L + ++++ ML V+
Sbjct: 1 MPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEK-----DAVSWNGMLAAYVRNGRVEE 55
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
R + ++ S+ + L+ Y + G + +A+ FD +P +++V +N M++G R
Sbjct: 56 ARGLFNSRTEWDVISW----NALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYAR 111
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
RG + E+RRLF +D +WT +++G QNG+ EA +F M + ++ ++
Sbjct: 112 RGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMP----ERNAVSWNAM 167
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ A ++E K++ + NV + ++ Y + ++ A++VF TM K+
Sbjct: 168 VAAYIQRRMMDEAKELFNMMPCR----NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDA 223
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW AML Y Q GCSEE +++F M R G + V+S+CA++A+LE G Q HGR
Sbjct: 224 VSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGR 283
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ G V NAL+ Y KCGN+ED+ F EM RD VSW +++GYA+ G E
Sbjct: 284 LIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEA 343
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+++F+ M + KPD++TL+GVL+ACS +GLVEKG YF M ++G+ +HYTCMID
Sbjct: 344 LEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMID 403
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAGRL EA + MPF PD+ W LL + RIH N E+G+ AAE + EL+P N
Sbjct: 404 LLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGM 463
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS+IYAS GKW ++R M E+GV+K PG SWI+ +++VH FSA D P ++I
Sbjct: 464 YVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKI 523
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
YA LE L+ +M K GYV VLHDVE EK ML +HSEKLA+A+G+L IPPG PIRV
Sbjct: 524 YAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRV 583
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+KNLRVC DCHNA KYIS I R IL+RD+ RFH F+ G CSCGD+W
Sbjct: 584 IKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 630
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 268/644 (41%), Positives = 398/644 (61%), Gaps = 38/644 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNL---MLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQ 63
V WNL++ ++G ++D K +++ ML G+ ++ T+ ML + + LG Q
Sbjct: 311 VLWNLML---VAYGQIDDLAKSFDIFYRMLAAGV-RPNKFTYPCMLRTCTHTGEIGLGEQ 366
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
IH +K GF S ++V L+DMY+K G + A+R D +
Sbjct: 367 IHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILD---------------------M 405
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
+EE KD +SWT+MI G +Q+ +EA++ F+EM+ G+ D S ++A
Sbjct: 406 IEE----------KDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISA 455
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C G+ A+ +G QIHA + + + +V + + LV +Y +C K A S F + K ++W
Sbjct: 456 CAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITW 515
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
++ G+ Q+G EEA+K+F M + G + + FT S IS+ ANLA +++G Q H R +
Sbjct: 516 NGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIK 575
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
TG S +SNAL++ YGKCG+IED+ F EM R+EVSW +++ ++ G+ E +DL
Sbjct: 576 TGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDL 635
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F++M GLKP +VT +GVL+ACS GLVE+G YF+ M E+GI P DHY C++DIL
Sbjct: 636 FDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILG 695
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
RAG+L+ AK F+ +MP P D++ W TLLS+C++H N+EIG++AA+ LLEL+P++ ASYVL
Sbjct: 696 RAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVL 755
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LS+ YA GKW Q+R+ M+++GVRK+PG SWI+ K+ VH F D P +DQIY
Sbjct: 756 LSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNF 815
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
L LN ++ K GY + + H+ E K HSEKLA+AFGL+ +P +P+RV+KN
Sbjct: 816 LSHLNDRLYKIGYKQENYHLFHEKEKEGKDPTAFVHSEKLAVAFGLMSLPSCMPLRVIKN 875
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LRVC+DCH K+ S + REI++RD RFH F NG CSCGD+W
Sbjct: 876 LRVCNDCHTWMKFTSGVMGREIVLRDVYRFHHFNNGSCSCGDYW 919
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 130/459 (28%), Positives = 232/459 (50%), Gaps = 36/459 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + D V++N LISGHA G + A+ +++ M GL S +T +++L S+ +
Sbjct: 204 MLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDS-VTIASLLAACSAVGDLRK 262
Query: 61 GRQIHGHILKFGFG-SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G+Q+H ++LK G Y+ GS L+D+Y K G I +A + FD N+V+
Sbjct: 263 GKQLHSYLLKAGMSLDYIMEGS-LLDLYVKSGDIEEALQIFDSGDRTNVVL--------- 312
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
W M+ Q ++ D+F M G+ ++FT+
Sbjct: 313 ----------------------WNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPC 350
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L C + G+QIH+ I+N + +++V L+DMY K + A+ + + K+
Sbjct: 351 MLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKD 410
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VVSWT+M+ GY Q+ +EA++ F MQ GI PD+ L S IS+CA + ++ +G+Q H
Sbjct: 411 VVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHA 470
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
R V+G + +++ N LV Y +CG +++ F + ++ ++W L+SG+A+ G E
Sbjct: 471 RVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEE 530
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ +F KM G K + T + +SA + +++G+ ++K G + +I
Sbjct: 531 ALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKT-GYTSETEISNALI 589
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ + G +E+AK +M + + W T+++ C HG
Sbjct: 590 SLYGKCGSIEDAKMDFFEMT-KRNEVSWNTIITCCSQHG 627
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/448 (26%), Positives = 219/448 (48%), Gaps = 48/448 (10%)
Query: 55 RRCVDLGR------QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNI 108
R C GR +IH + G Y +G+ L+D+YAK
Sbjct: 49 RACRGSGRRWPLVPEIHAKAIICGLSGYRIIGNLLIDLYAK------------------- 89
Query: 109 VMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE 168
+G V +RR+F + +D++SW +++G QNGL EA+ L+REM
Sbjct: 90 ------------KGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRS 137
Query: 169 GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYA 228
G+ + S+L+AC + G+ IH + + FVG+AL+ +Y +C+S + A
Sbjct: 138 GVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLA 197
Query: 229 ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL 288
+ VF M + + V++ ++ G+ Q G + A+ IF MQ +G+ PD T+ S++++C+ +
Sbjct: 198 DRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAV 257
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
L +G Q H L G+ + +L+ Y K G+IE++ ++F+ + + V W ++
Sbjct: 258 GDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLML 317
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
Y + ++ D+F +ML+ G++P++ T +L C+ G + G + +K G
Sbjct: 318 VAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKN-GF 376
Query: 409 RPIHDHYT--CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWA 466
+ D Y +ID+ S+ G L++A+ ++ M D + W ++++ H E K A
Sbjct: 377 QS--DMYVSGVLIDMYSKYGWLDKAQRILD-MIEEKDVVSWTSMIAGYVQH---EFCKEA 430
Query: 467 AESLLELDPYN--PASYVLLSSIYASKG 492
E+ E+ P + L S+I A G
Sbjct: 431 LETFKEMQACGIWPDNIGLASAISACAG 458
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 140/501 (27%), Positives = 238/501 (47%), Gaps = 47/501 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+ D VSW ++SG+A +G +AV++Y M + G+ + S++L + L
Sbjct: 103 LSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYV-LSSILSACTKTELFQL 161
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR IH + K GF S FVG+ L+ +Y LR
Sbjct: 162 GRLIHVQVYKQGFFSETFVGNALISLY-------------------------------LR 190
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ R+F M DS+++ T+I+G Q G A+ +F EM+L GL+ D T S+
Sbjct: 191 CRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASL 250
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC + L +GKQ+H+++++ + + +L+D+Y K I+ A +F + NV
Sbjct: 251 LAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNV 310
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V W MLV YGQ ++ IF M G+ P+ FT ++ +C + + G Q H
Sbjct: 311 VLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSL 370
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ G S + VS L+ Y K G ++ + R+ + + +D VSWT++++GY + E
Sbjct: 371 TIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEA 430
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY--GIRPIHDHYTCM 418
++ F++M + G+ PD + L +SAC+ V +G +I + Y G + +
Sbjct: 431 LETFKEMQACGIWPDNIGLASAISACAGIKAVHQGS---QIHARVYVSGYSADVSIWNGL 487
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD---- 474
+ + +R G +EA S + + I W L+S G E A + +++D
Sbjct: 488 VYLYARCGISKEAFSSFEAIEH-KEGITWNGLISGFAQSGLYE---EALKVFMKMDQAGA 543
Query: 475 PYNPASYVLLSSIYASKGKWD 495
YN ++V SSI AS D
Sbjct: 544 KYNVFTFV--SSISASANLAD 562
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 119/278 (42%), Gaps = 46/278 (16%)
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
M + S+ L G+ E+ + +F R + LG+V +CA A G
Sbjct: 1 MTPRGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYM-----VLGAVDFACALRACRGSG 55
Query: 295 ------TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
+ H ++++ GL + + N L+ Y K G + + R+F E++VRD VSW A++
Sbjct: 56 RRWPLVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVL 115
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
SGYA+ G E + L+ +M G+ P L +LSAC++ L + GR + V + G
Sbjct: 116 SGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGR-LIHVQVYKQGF 174
Query: 409 ------------------------RPIHDHYTC-------MIDILSRAGRLEEAKSFINK 437
R D C +I ++ G + A ++
Sbjct: 175 FSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDE 234
Query: 438 MP---FPPDAIGWATLLSSCRIHGNVEIGKWAAESLLE 472
M PD++ A+LL++C G++ GK LL+
Sbjct: 235 MQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLK 272
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 267/648 (41%), Positives = 401/648 (61%), Gaps = 33/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW +ISG + + ++A++ + M G ++ FS+ + +S +++
Sbjct: 66 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICG-EVPTQFAFSSAIRACASLGSIEM 124
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H LKFG GS +FVGS L DMY+K G ++DA + F+E+P
Sbjct: 125 GKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP---------------- 168
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
KD +SWT MI G + G EA+ F++M E + +DQ S
Sbjct: 169 ---------------CKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCST 213
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA-WKN 239
L ACG L A + G+ +H+ +++ + ++FVG+AL DMY K ++ A +VF + +N
Sbjct: 214 LGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRN 273
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VVS+T ++ GY + E+ + +F ++R GIEP++FT S+I +CAN A+LE+GTQ H
Sbjct: 274 VVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHA 333
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ + VS+ LV YGKCG +E + + F+E+ E++W +LVS + + G +
Sbjct: 334 QVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKD 393
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
I FE+M+ G+KP+ +T I +L+ CS AGLVE+G YF M K YG+ P +HY+C+I
Sbjct: 394 AIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVI 453
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L RAGRL+EAK FIN+MPF P+A GW + L +CRIHG+ E+GK AAE L++L+P N
Sbjct: 454 DLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSG 513
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+ VLLS+IYA++ +W+ V +R MR+ V+K PG SW+ + H+F A+DWS
Sbjct: 514 ALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHXRKSA 573
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY +L+ L ++ GYVP SV D++ K K+L+ HSE++A+AF L+ +P G PI
Sbjct: 574 IYEKLDXLLDQIKAAGYVPXTDSVPLDMDDXMKEKLLHRHSERIAVAFALISMPIGKPII 633
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V KNLRVC DCH+A K+ISK+T R+I+VRD RFH F +G CSCGD+W
Sbjct: 634 VKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 197/400 (49%), Gaps = 36/400 (9%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H ++ G+ F+ + LV+MY+K G + A + FD +P++N+
Sbjct: 24 GKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNL------------ 71
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+SWT MI+GL QN EAI F MR+ G QF F S
Sbjct: 72 -------------------VSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSA 112
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ AC L ++E GKQ+H ++ +FVGS L DMY KC ++ A VF M K+
Sbjct: 113 IRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDE 172
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWTAM+ GY + G EEA+ F M + D L S + +C L + + G H
Sbjct: 173 VSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSS 232
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN-EMNVRDEVSWTALVSGYAKFGKANE 359
+ G S I V NAL Y K G++E + +F + R+ VS+T L+ GY + + +
Sbjct: 233 VVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEK 292
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH-YFEIMVKEYGIRPIHDHYTCM 418
+ +F ++ G++P+E T ++ AC+ +E+G + ++M + P + +
Sbjct: 293 GLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SIL 350
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+D+ + G LE A +++ P + I W +L+S HG
Sbjct: 351 VDMYGKCGLLEHAIQAFDEIGDPTE-IAWNSLVSVFGQHG 389
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 143/272 (52%), Gaps = 6/272 (2%)
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
L GKQ+HA +I + F+ + LV+MY KC + +A +F TM +N+VSWTAM+ G
Sbjct: 21 LRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISG 80
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
QN EA++ FC M+ G P F S I +CA+L S+E G Q H +L G+ S
Sbjct: 81 LSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSE 140
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
+ V + L Y KCG + D+ ++F EM +DEVSWTA++ GY+K G+ E + F+KM+
Sbjct: 141 LFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMID 200
Query: 370 HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLE 429
+ D+ L L AC + GR +VK G + D+ S+AG +E
Sbjct: 201 EEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVK-LGFESDIFVGNALTDMYSKAGDME 259
Query: 430 EAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
A + F D+ + +C I G VE
Sbjct: 260 SASNV-----FGIDSECRNVVSYTCLIDGYVE 286
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 8/198 (4%)
Query: 274 DDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLF 333
D L VI + A L G Q H + G ++N LV Y KCG ++ + +LF
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 334 NEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVE 393
+ M R+ VSWTA++SG ++ K +E I F M G P + + AC+ G +E
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123
Query: 394 KGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
G+ + +K +GI + + D+ S+ G + +A +MP D + W +
Sbjct: 124 MGKQMHCLALK-FGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP-CKDEVSWTAM--- 178
Query: 454 CRIHGNVEIGKWAAESLL 471
I G +IG++ E+LL
Sbjct: 179 --IDGYSKIGEF-EEALL 193
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 260/691 (37%), Positives = 412/691 (59%), Gaps = 52/691 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLG----NLSRITFSTMLIMSSSRRCVDL 60
D V +N +I+G+A +G + A++++ M +D + + + +L + + ++C
Sbjct: 111 DSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQC--- 167
Query: 61 GRQIHGHILKFGFGSYVF-VGSPLVDMYAK----LGL----IYDAKRGFDELPEKNIVMY 111
Q+H ++K G G V + L+ +Y K LG+ + A++ FDE+P+++ + +
Sbjct: 168 -GQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTW 226
Query: 112 NTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLA 171
TMITG +R + +R +F M + +W MI+G + G +EA+ L R+MR G+
Sbjct: 227 TTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQ 286
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDN----VFVGSALVDMYCKCKSIKY 227
D T+ ++++AC + + + GKQ+HA+I++N+ N + V +AL+ +YCK +
Sbjct: 287 FDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDE 346
Query: 228 AESVFRTMAWKNVVSWTAMLVGY-------------------------------GQNGCS 256
A +F M +N+++W A+L GY QNG
Sbjct: 347 ARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFG 406
Query: 257 EEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNAL 316
+E +K+F M+ +G EP DF +++C+ L +LE G Q H + + G S ++V NA+
Sbjct: 407 DEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAM 466
Query: 317 VTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDE 376
++ Y KCG +E + +F M D VSW ++++ + G + I+LF++ML G+ PD
Sbjct: 467 ISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDR 526
Query: 377 VTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFIN 436
+T + VL+ACS AGLVEKGRHYF M++ YGI P DHY M+D+ RAG A+ I+
Sbjct: 527 ITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVID 586
Query: 437 KMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDH 496
MP P A W LL+ CRIHGN+++G AAE L +L P N +YVLLS+IYA G+W+
Sbjct: 587 SMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWND 646
Query: 497 VSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGY 556
V+++R+ MR++ VRK+P CSWI+ +++VH+F DD P +Y LE+L +M K GY
Sbjct: 647 VAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGY 706
Query: 557 VPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKY 616
+PD VLHD+E +K L+ HSEKLA+ FG++ +PP +RV KN+R+C DCHNA K+
Sbjct: 707 IPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPDATVRVFKNIRICGDCHNAFKF 766
Query: 617 ISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+SK+ +REI+VRD RFH FKNG+CSC D+W
Sbjct: 767 MSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 132/478 (27%), Positives = 221/478 (46%), Gaps = 80/478 (16%)
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
L R +H H++ GF + L++MY K + A++ F+E+P + + T+IT
Sbjct: 31 LARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITAYC 90
Query: 120 RRGLVEESRRLFRG--MKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
G +E R +F G + +DS+ + MITG NG A++LFR MR + D FTF
Sbjct: 91 ALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTF 150
Query: 178 GSVLTACGGLLALEEG-KQIHAFIIRNDHK-DNVFVGSALVDMYCK--------CKSIKY 227
SVL+A + E+ Q+H +++ + V +AL+ +Y K C ++
Sbjct: 151 TSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVS 210
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQN-------------------------------GCS 256
A +F M ++ ++WT M+ GY +N GC
Sbjct: 211 ARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCF 270
Query: 257 EEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI---SF-ITV 312
+EA+ + M+ GI+ DD T ++IS+CAN+ S + G Q H L L SF ++V
Sbjct: 271 QEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSV 330
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK---------------- 356
SNAL+T Y K ++++ ++F M VR+ ++W A++SGY G+
Sbjct: 331 SNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNL 390
Query: 357 ---------------ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEI 401
+E + LF++M G +P + G L+ACS G +E GR
Sbjct: 391 LTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQ 450
Query: 402 MVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+V G MI + ++ G +E A+S MP D + W +++++ HG+
Sbjct: 451 LV-HLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMP-SVDLVSWNSMIAALGQHGH 506
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 9/145 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN +I+ HG A+++++ MLK+G+ RITF T+L S V+
Sbjct: 486 MPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFP-DRITFLTVLTACSHAGLVEK 544
Query: 61 GRQIHGHILK-FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEK------NIVMYNT 113
GR +L+ +G + +VD++ + G+ A+ D +P K ++
Sbjct: 545 GRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGC 604
Query: 114 MITGLLRRGLVEESRRLFRGMKDKD 138
I G + G +E + +LF+ M D
Sbjct: 605 RIHGNMDLG-IEAAEQLFKLMPQND 628
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 267/634 (42%), Positives = 380/634 (59%), Gaps = 39/634 (6%)
Query: 53 SSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYN 112
+S R +D G+Q+H GF + V S L MY K I DA++ FD +P++++V+++
Sbjct: 115 ASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWS 174
Query: 113 TMITGLLRRGLVEESRRLFRGMK----DKDSISWTTMITGLMQNGLEREAIDLFREMRLE 168
MI G R GLVEE++ LF M+ + + +SW M+ G NG EA+ +FR M ++
Sbjct: 175 AMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQ 234
Query: 169 GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYA 228
G D T VL A G L + G Q+H ++I+ + FV SA++DMY KC +K
Sbjct: 235 GFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEM 294
Query: 229 ESVFRTMAWK-----------------------------------NVVSWTAMLVGYGQN 253
VF + NVV+WT+++ QN
Sbjct: 295 SRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQN 354
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVS 313
G EA+++F +MQ G+EP+ T+ S+I +C N+++L G + H SL G+ + V
Sbjct: 355 GKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVG 414
Query: 314 NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLK 373
+AL+ Y KCG I+ + R F++M+ + VSW A++ GYA GKA ET+++F ML G K
Sbjct: 415 SALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQK 474
Query: 374 PDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKS 433
PD VT VLSAC++ GL E+G + M +E+GI P +HY C++ +LSR G+LEEA S
Sbjct: 475 PDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYS 534
Query: 434 FINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGK 493
I +MPF PDA W LLSSCR+H N+ +G+ AAE L L+P NP +Y+LLS+IYASKG
Sbjct: 535 IIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGL 594
Query: 494 WDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIK 553
WD +++R M+ KG+RK+PG SWI+ +VH+ A D S P I +L+KLN +M K
Sbjct: 595 WDEENRIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKK 654
Query: 554 EGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNA 613
GY+P + VL DVE +K ++L HSEKLA+ GLL PG P++V+KNLR+C DCH
Sbjct: 655 SGYLPKTNFVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAV 714
Query: 614 TKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
K IS++ REI VRD RFH FK+G CSCGDFW
Sbjct: 715 IKVISRLEGREIYVRDTNRFHHFKDGVCSCGDFW 748
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/349 (35%), Positives = 200/349 (57%), Gaps = 7/349 (2%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSWN +++G ++G ++AV ++ +ML G T S +L V +G Q+HG
Sbjct: 206 VSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWP-DGSTVSCVLPAVGCLEDVVVGAQVHG 264
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+++K G GS FV S ++DMY K G + + R FDE+ E I N +TGL R G+V+
Sbjct: 265 YVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDT 324
Query: 127 SRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
+ +F KD+ + ++WT++I QNG + EA++LFR+M+ G+ + T S++
Sbjct: 325 ALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIP 384
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
ACG + AL GK+IH F +R D+V+VGSAL+DMY KC I+ A F M+ N+VS
Sbjct: 385 ACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVS 444
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHGRS 301
W A++ GY +G ++E +++F M ++G +PD T V+S+CA EEG + ++ S
Sbjct: 445 WNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMS 504
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVS 349
G+ + LVT + G +E+++ + EM D W AL+S
Sbjct: 505 EEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLS 553
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/486 (22%), Positives = 196/486 (40%), Gaps = 110/486 (22%)
Query: 51 MSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVM 110
+SSS + RQ H IL+ S + + L+ YA
Sbjct: 9 LSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYAN--------------------- 47
Query: 111 YNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL 170
L + S L + S++++I ++ + F + L
Sbjct: 48 -------ALSLSTPQLSLTLSSHLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRL 100
Query: 171 AMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAES 230
D F S + +C L AL+ G+Q+HAF + + V S+L MY KC I A
Sbjct: 101 IPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARK 160
Query: 231 VFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE------------------ 272
+F M ++VV W+AM+ GY + G EEA ++F M+ G+E
Sbjct: 161 LFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGF 220
Query: 273 -----------------PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNA 315
PD T+ V+ + L + G Q HG + GL S V +A
Sbjct: 221 YDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSA 280
Query: 316 LVTFYGKCGNIEDSHRLFNEM-----------------------------NVRDE----- 341
++ YGKCG +++ R+F+E+ +D+
Sbjct: 281 MLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELN 340
Query: 342 -VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR--HY 398
V+WT++++ ++ GK E ++LF M ++G++P+ VT+ ++ AC + G+ H
Sbjct: 341 VVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHC 400
Query: 399 FEIMVKEYGIRPIHDHY---TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCR 455
F + R I D + +ID+ ++ GR++ A+ +KM + + W ++
Sbjct: 401 FSLR------RGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMS-ALNLVSWNAVMKGYA 453
Query: 456 IHGNVE 461
+HG +
Sbjct: 454 MHGKAK 459
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 257/641 (40%), Positives = 400/641 (62%), Gaps = 33/641 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW +I+G A HG +++A +N M++ G+ +R+TF ++L SS + G+QI
Sbjct: 379 VSWTAMIAGFAQHGRIDEAFLFFNKMIESGI-EPNRVTFMSILGACSSPSALKRGQQIQD 437
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
HI++ G+GS V + L+ MYAK G + DA R F+++ ++N+
Sbjct: 438 HIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNV------------------ 479
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
++W MIT +Q+ A+ F+ + EG+ + TF S+L C
Sbjct: 480 -------------VAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKS 526
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+LE GK +H I++ + ++ V +ALV M+ C + A+++F M +++VSW +
Sbjct: 527 SDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTI 586
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ G+ Q+G ++ A F MQ +GI+PD T ++++CA+ +L EG + H
Sbjct: 587 IAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAF 646
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ V L++ Y KCG+IED+H++F+++ ++ SWT++++GYA+ G+ E ++LF +
Sbjct: 647 DCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQ 706
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M G+KPD +T +G LSAC+ AGL+E+G H+F+ M KE+ I P +HY CM+D+ RAG
Sbjct: 707 MQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAG 765
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
L EA FI KM PD+ W LL +C++H NVE+ + AA+ LELDP + +V+LS+
Sbjct: 766 LLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSN 825
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IYA+ G W V+++R+ M ++GV K PG SWI+ +VH F +DD + P +++I+AELE+
Sbjct: 826 IYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELER 885
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
L+ +M + GYVPD VLHDVE +EK + L +HSE+LAI +GLL PP PI + KNLRV
Sbjct: 886 LHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRV 945
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCH ATK+ISKIT+R+I+ RD+ RFH FK+G CSCGDFW
Sbjct: 946 CGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 145/459 (31%), Positives = 252/459 (54%), Gaps = 34/459 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D SWNLL+ G+ HG +A K++ M++D + R TF +ML + R VD GR++
Sbjct: 175 DVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKR-TFVSMLNACADARNVDKGREL 233
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
+ ILK G+ + +FVG+ L++M+ K G I DA + FD LP +++V
Sbjct: 234 YNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLV--------------- 278
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+WT+MITGL ++G ++A +LF+ M EG+ D+ F S+L AC
Sbjct: 279 ----------------TWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRAC 322
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
ALE+GK++HA + ++VG+A++ MY KC S++ A VF + +NVVSWT
Sbjct: 323 NHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWT 382
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
AM+ G+ Q+G +EA F M +GIEP+ T S++ +C++ ++L+ G Q +
Sbjct: 383 AMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEA 442
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G S V AL++ Y KCG+++D+HR+F +++ ++ V+W A+++ Y + + + + F
Sbjct: 443 GYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATF 502
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+ +L G+KP+ T +L+ C + +E G+ + ++ + G+ ++ +
Sbjct: 503 QALLKEGIKPNSSTFTSILNVCKSSDSLELGK-WVHFLIMKAGLESDLHVSNALVSMFVN 561
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
G L AK+ N MP D + W T+++ HG ++
Sbjct: 562 CGDLMSAKNLFNDMP-KRDLVSWNTIIAGFVQHGKNQVA 599
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 136/473 (28%), Positives = 239/473 (50%), Gaps = 37/473 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D V+W +I+G A HG A ++ M ++G+ ++ F ++L + ++
Sbjct: 272 LPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGV-QPDKVAFVSLLRACNHPEALEQ 330
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+++H + + G+ + ++VG+ ++ MY K G + DA FD + +N+V + MI G +
Sbjct: 331 GKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQ 390
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G ++ EA F +M G+ ++ TF S+
Sbjct: 391 HGRID-------------------------------EAFLFFNKMIESGIEPNRVTFMSI 419
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC AL+ G+QI II + + V +AL+ MY KC S+K A VF ++ +NV
Sbjct: 420 LGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNV 479
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+W AM+ Y Q+ + A+ F + + GI+P+ T S+++ C + SLE G H
Sbjct: 480 VAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFL 539
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ GL S + VSNALV+ + CG++ + LFN+M RD VSW +++G+ + GK
Sbjct: 540 IMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVA 599
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
D F+ M G+KPD++T G+L+AC+ + +GR ++ E T +I
Sbjct: 600 FDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRR-LHALITEAAFDCDVLVGTGLIS 658
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL 473
+ ++ G +E+A +K+P + W ++++ HG GK A E ++
Sbjct: 659 MYTKCGSIEDAHQVFHKLP-KKNVYSWTSMIAGYAQHGR---GKEALELFYQM 707
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 131/499 (26%), Positives = 257/499 (51%), Gaps = 42/499 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D N +++ + G N+A++V + + + R T+S +L + + + G +I
Sbjct: 74 DTQKANAVLNRLSKAGQFNEAMQVLERVDSSHI-QIYRQTYSALLQLCIKFKNLGDGERI 132
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
+ HI K G +F+ + L++MYAK G NT+
Sbjct: 133 YNHIKKSGVQPDIFMRNTLINMYAKCG--------------------NTI---------- 162
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
++++F M++KD SW ++ G +Q+GL EA L +M + + D+ TF S+L AC
Sbjct: 163 -SAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNAC 221
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+++G++++ I++ ++FVG+AL++M+ KC I A VF + +++V+WT
Sbjct: 222 ADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWT 281
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
+M+ G ++G ++A +F M+ G++PD S++ +C + +LE+G + H R
Sbjct: 282 SMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEV 341
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G + I V A+++ Y KCG++ED+ +F+ + R+ VSWTA+++G+A+ G+ +E F
Sbjct: 342 GWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFF 401
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
KM+ G++P+ VT + +L ACS +++G+ + ++ E G T ++ + ++
Sbjct: 402 NKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHII-EAGYGSDDRVRTALLSMYAK 460
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
G L++A K+ + + W ++++ H + ++LL+ + P S
Sbjct: 461 CGSLKDAHRVFEKIS-KQNVVAWNAMITAYVQHEQYDNALATFQALLK-EGIKPNSSTFT 518
Query: 485 SSIYASK-------GKWDH 496
S + K GKW H
Sbjct: 519 SILNVCKSSDSLELGKWVH 537
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 179/325 (55%), Gaps = 2/325 (0%)
Query: 137 KDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQI 196
KD+ ++ L + G EA+ + + + + + T+ ++L C L +G++I
Sbjct: 73 KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132
Query: 197 HAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCS 256
+ I ++ + ++F+ + L++MY KC + A+ +F M K+V SW +L GY Q+G
Sbjct: 133 YNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLY 192
Query: 257 EEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNAL 316
EEA K+ M ++ ++PD T S++++CA+ ++++G + + L G + + V AL
Sbjct: 193 EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTAL 252
Query: 317 VTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDE 376
+ + KCG+I D+ ++F+ + RD V+WT++++G A+ G+ + +LF++M G++PD+
Sbjct: 253 INMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDK 312
Query: 377 VTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFIN 436
V + +L AC+ +E+G+ M KE G T ++ + ++ G +E+A +
Sbjct: 313 VAFVSLLRACNHPEALEQGKKVHARM-KEVGWDTEIYVGTAILSMYTKCGSMEDALEVFD 371
Query: 437 KMPFPPDAIGWATLLSSCRIHGNVE 461
+ + + W +++ HG ++
Sbjct: 372 LVK-GRNVVSWTAMIAGFAQHGRID 395
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 123/285 (43%), Gaps = 66/285 (23%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN +I+G HG A + +M + G+ +ITF+ +L +S +
Sbjct: 575 MPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGI-KPDKITFTGLLNACASPEALTE 633
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR++H I + F V VG+ L+ MY K G I DA + F +LP+KN+ + +MI G +
Sbjct: 634 GRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQ 693
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G RG +EA++LF +M+ EG+ D TF
Sbjct: 694 HG---------RG----------------------KEALELFYQMQQEGVKPDWITFVGA 722
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+AC +EEG +H F +S+ +
Sbjct: 723 LSACAHAGLIEEG--LHHF-----------------------------QSMKEFNIEPRM 751
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
+ M+ +G+ G EAV+ MQ +EPD G+++ +C
Sbjct: 752 EHYGCMVDLFGRAGLLNEAVEFIIKMQ---VEPDSRVWGALLGAC 793
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 257/641 (40%), Positives = 400/641 (62%), Gaps = 33/641 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW +I+G A HG +++A +N M++ G+ +R+TF ++L SS + G+QI
Sbjct: 379 VSWTAMIAGFAQHGRIDEAFLFFNKMIESGI-EPNRVTFMSILGACSSPSALKRGQQIQD 437
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
HI++ G+GS V + L+ MYAK G + DA R F+++ ++N+
Sbjct: 438 HIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNV------------------ 479
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
++W MIT +Q+ A+ F+ + EG+ + TF S+L C
Sbjct: 480 -------------VAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKS 526
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+LE GK +H I++ + ++ V +ALV M+ C + A+++F M +++VSW +
Sbjct: 527 SDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTI 586
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ G+ Q+G ++ A F MQ +GI+PD T ++++CA+ +L EG + H
Sbjct: 587 IAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAF 646
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ V L++ Y KCG+IED+H++F+++ ++ SWT++++GYA+ G+ E ++LF +
Sbjct: 647 DCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQ 706
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M G+KPD +T +G LSAC+ AGL+E+G H+F+ M KE+ I P +HY CM+D+ RAG
Sbjct: 707 MQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAG 765
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
L EA FI KM PD+ W LL +C++H NVE+ + AA+ LELDP + +V+LS+
Sbjct: 766 LLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSN 825
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IYA+ G W V+++R+ M ++GV K PG SWI+ +VH F +DD + P +++I+AELE+
Sbjct: 826 IYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELER 885
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
L+ +M + GYVPD VLHDVE +EK + L +HSE+LAI +GLL PP PI + KNLRV
Sbjct: 886 LHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRV 945
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCH ATK+ISKIT+R+I+ RD+ RFH FK+G CSCGDFW
Sbjct: 946 CGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 145/459 (31%), Positives = 252/459 (54%), Gaps = 34/459 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D SWNLL+ G+ HG +A K++ M++D + R TF +ML + R VD GR++
Sbjct: 175 DVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKR-TFVSMLNACADARNVDKGREL 233
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
+ ILK G+ + +FVG+ L++M+ K G I DA + FD LP +++V
Sbjct: 234 YNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLV--------------- 278
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+WT+MITGL ++G ++A +LF+ M EG+ D+ F S+L AC
Sbjct: 279 ----------------TWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRAC 322
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
ALE+GK++HA + ++VG+A++ MY KC S++ A VF + +NVVSWT
Sbjct: 323 NHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWT 382
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
AM+ G+ Q+G +EA F M +GIEP+ T S++ +C++ ++L+ G Q +
Sbjct: 383 AMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEA 442
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G S V AL++ Y KCG+++D+HR+F +++ ++ V+W A+++ Y + + + + F
Sbjct: 443 GYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATF 502
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+ +L G+KP+ T +L+ C + +E G+ + ++ + G+ ++ +
Sbjct: 503 QALLKEGIKPNSSTFTSILNVCKSSDSLELGK-WVHFLIMKAGLESDLHVSNALVSMFVN 561
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
G L AK+ N MP D + W T+++ HG ++
Sbjct: 562 CGDLMSAKNLFNDMP-KRDLVSWNTIIAGFVQHGKNQVA 599
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 136/473 (28%), Positives = 239/473 (50%), Gaps = 37/473 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D V+W +I+G A HG A ++ M ++G+ ++ F ++L + ++
Sbjct: 272 LPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGV-QPDKVAFVSLLRACNHPEALEQ 330
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+++H + + G+ + ++VG+ ++ MY K G + DA FD + +N+V + MI G +
Sbjct: 331 GKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQ 390
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G ++ EA F +M G+ ++ TF S+
Sbjct: 391 HGRID-------------------------------EAFLFFNKMIESGIEPNRVTFMSI 419
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC AL+ G+QI II + + V +AL+ MY KC S+K A VF ++ +NV
Sbjct: 420 LGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNV 479
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+W AM+ Y Q+ + A+ F + + GI+P+ T S+++ C + SLE G H
Sbjct: 480 VAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFL 539
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ GL S + VSNALV+ + CG++ + LFN+M RD VSW +++G+ + GK
Sbjct: 540 IMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVA 599
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
D F+ M G+KPD++T G+L+AC+ + +GR ++ E T +I
Sbjct: 600 FDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRR-LHALITEAAFDCDVLVGTGLIS 658
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL 473
+ ++ G +E+A +K+P + W ++++ HG GK A E ++
Sbjct: 659 MYTKCGSIEDAHQVFHKLP-KKNVYSWTSMITGYAQHGR---GKEALELFYQM 707
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 129/494 (26%), Positives = 254/494 (51%), Gaps = 42/494 (8%)
Query: 10 NLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHIL 69
N +++ + G N+A++V + + + R T+S +L + + + G +I+ HI
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLERVDSSHI-QIYRQTYSALLQLCIKFKNLGDGERIYNHIK 137
Query: 70 KFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRR 129
K G +F+ + L++MYAK G AK+ FD++ EK++ +N ++ G ++ GL E
Sbjct: 138 KSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYE---- 193
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
EA L +M + + D+ TF S+L AC
Sbjct: 194 ---------------------------EAFKLHEQMVQDSVKPDKRTFVSMLNACADARN 226
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
+++G++++ I++ ++FVG+AL++M+ KC I A VF + +++V+WT+M+ G
Sbjct: 227 VDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITG 286
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
++G ++A +F M+ G++PD S++ +C + +LE+G + H R G +
Sbjct: 287 LARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTE 346
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
I V A+++ Y KCG++ED+ +F+ + R+ VSWTA+++G+A+ G+ +E F KM+
Sbjct: 347 IYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIE 406
Query: 370 HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLE 429
G++P+ VT + +L ACS +++G+ + ++ E G T ++ + ++ G L+
Sbjct: 407 SGIEPNRVTFMSILGACSSPSALKRGQQIQDHII-EAGYGSDDRVRTALLSMYAKCGSLK 465
Query: 430 EAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYA 489
+A K+ + + W ++++ H + ++LL+ + P S S +
Sbjct: 466 DAHRVFEKIS-KQNVVAWNAMITAYVQHEQYDNALATFQALLK-EGIKPNSSTFTSILNV 523
Query: 490 SK-------GKWDH 496
K GKW H
Sbjct: 524 CKSSDSLELGKWVH 537
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 179/325 (55%), Gaps = 2/325 (0%)
Query: 137 KDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQI 196
KD+ ++ L + G EA+ + + + + + T+ ++L C L +G++I
Sbjct: 73 KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132
Query: 197 HAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCS 256
+ I ++ + ++F+ + L++MY KC + A+ +F M K+V SW +L GY Q+G
Sbjct: 133 YNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLY 192
Query: 257 EEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNAL 316
EEA K+ M ++ ++PD T S++++CA+ ++++G + + L G + + V AL
Sbjct: 193 EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTAL 252
Query: 317 VTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDE 376
+ + KCG+I D+ ++F+ + RD V+WT++++G A+ G+ + +LF++M G++PD+
Sbjct: 253 INMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDK 312
Query: 377 VTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFIN 436
V + +L AC+ +E+G+ M KE G T ++ + ++ G +E+A +
Sbjct: 313 VAFVSLLRACNHPEALEQGKKVHARM-KEVGWDTEIYVGTAILSMYTKCGSMEDALEVFD 371
Query: 437 KMPFPPDAIGWATLLSSCRIHGNVE 461
+ + + W +++ HG ++
Sbjct: 372 LVK-GRNVVSWTAMIAGFAQHGRID 395
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 124/285 (43%), Gaps = 66/285 (23%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN +I+G HG A + +M + G+ +ITF+ +L +S +
Sbjct: 575 MPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGI-KPDKITFTGLLNACASPEALTE 633
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR++H I + F V VG+ L+ MY K G I DA + F +LP+KN+ + +MITG +
Sbjct: 634 GRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQ 693
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G RG +EA++LF +M+ EG+ D TF
Sbjct: 694 HG---------RG----------------------KEALELFYQMQQEGVKPDWITFVGA 722
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+AC +EEG +H F +S+ +
Sbjct: 723 LSACAHAGLIEEG--LHHF-----------------------------QSMKEFNIEPRM 751
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
+ M+ +G+ G EAV+ MQ +EPD G+++ +C
Sbjct: 752 EHYGCMVDLFGRAGLLNEAVEFIIKMQ---VEPDSRVWGALLGAC 793
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 264/648 (40%), Positives = 409/648 (63%), Gaps = 36/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D V+WN +I+G+ +G + +++N M G+ + +TF++++ +S R + L
Sbjct: 255 MEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGV-KPTHMTFASVIKSCASLRELAL 313
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+ + LK GF + V + L+ +K + DA F
Sbjct: 314 VKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLF-------------------- 353
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
L+EE K+ +SWT MI+G +QNG +A++LF +MR EG+ + FT+ ++
Sbjct: 354 -SLMEEG---------KNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAI 403
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LT + E +HA +I+ +++ + VG+AL+D Y K + A VF + K++
Sbjct: 404 LTVHYPVFVSE----MHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDL 459
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN-LASLEEGTQFHG 299
++W+AML GY Q G +EEA K+F + + GI+P++FT SVI++CA+ A+ E+G QFH
Sbjct: 460 MAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHA 519
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
++ L + + VS+ALVT Y K GNI+ +H +F RD VSW +++SGY++ G+A +
Sbjct: 520 YAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKK 579
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+++F++M + D VT IGV++AC+ AGLVEKG+ YF M+ ++ I P HY+CMI
Sbjct: 580 ALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMI 639
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+ SRAG LE+A IN+MPFPP A W TLL + R+H NVE+G+ AAE L+ L P + A
Sbjct: 640 DLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSA 699
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+YVLLS++YA+ G W + +R+ M ++ V+K+PG SWI+ K++ + F A D + P S+Q
Sbjct: 700 AYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQ 759
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY++L +L+ ++ GY PD +V HD+E +K +L+HHSE+LAIAFGL+ PP +PI+
Sbjct: 760 IYSKLSELSIRLKDAGYQPDTKNVFHDIEDEQKETILSHHSERLAIAFGLIATPPEIPIQ 819
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+VKNLRVC DCHN TK +S + QR I+VRD+ RFH FK+G CSCGD+W
Sbjct: 820 IVKNLRVCGDCHNFTKLVSLVEQRYIVVRDSNRFHHFKDGLCSCGDYW 867
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 127/477 (26%), Positives = 238/477 (49%), Gaps = 51/477 (10%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW L++G++ +G +++ M +G+ +R T ST++ + V +G Q+H
Sbjct: 160 VSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLP-NRYTVSTVIAALVNEGVVGIGLQVHA 218
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++K GF E+ I ++N++I+ R G++ +
Sbjct: 219 MVVKHGF-------------------------------EEAIPVFNSLISLYSRLGMLRD 247
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+R +F M+ +D ++W +MI G ++NG + E ++F +M+L G+ TF SV+ +C
Sbjct: 248 ARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCAS 307
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM-AWKNVVSWTA 245
L L K + +++ + V +AL+ KCK + A S+F M KNVVSWTA
Sbjct: 308 LRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTA 367
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
M+ G QNG +++AV +F M+R G++P+ FT ++++ + ++ H + T
Sbjct: 368 MISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFV----SEMHAEVIKTN 423
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
+V AL+ Y K GN D+ ++F + +D ++W+A+++GYA+ G+ E LF
Sbjct: 424 YERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFH 483
Query: 366 KMLSHGLKPDEVTLIGVLSAC-SRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC----MID 420
+++ G+KP+E T V++AC S E+G+ + Y I+ ++ C ++
Sbjct: 484 QLIKEGIKPNEFTFSSVINACASPTAAAEQGKQF-----HAYAIKMRLNNALCVSSALVT 538
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
+ ++ G ++ A + D + W +++S HG K A E E+ N
Sbjct: 539 MYAKRGNIDSAHEVFKRQK-ERDLVSWNSMISGYSQHGQ---AKKALEVFDEMQKRN 591
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 200/411 (48%), Gaps = 54/411 (13%)
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
LGRQ+H +KFG +V VG+ LVDMY K + D +R FDE+ E+N+V
Sbjct: 111 LGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVV---------- 160
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
SWT+++ G NGL +LF +M+ EG+ +++T +
Sbjct: 161 ---------------------SWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVST 199
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
V+ A + G Q+HA ++++ ++ + V ++L+ +Y + ++ A VF M ++
Sbjct: 200 VIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRD 259
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
V+W +M+ GY +NG E +IF MQ G++P T SVI SCA+L L
Sbjct: 260 WVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQC 319
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALVSGYAKFGKAN 358
++L +G + V AL+ KC ++D+ LF+ M ++ VSWTA++SG + G +
Sbjct: 320 KALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGND 379
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--- 415
+ ++LF +M G+KP+ T +L+ ++ + V E I +Y
Sbjct: 380 QAVNLFSQMRREGVKPNHFTYSAILTV------------HYPVFVSEMHAEVIKTNYERS 427
Query: 416 ----TCMIDILSRAGR-LEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
T ++D + G ++ K F ++ D + W+ +L+ G E
Sbjct: 428 SSVGTALLDAYVKLGNTIDAVKVF--EIIEAKDLMAWSAMLAGYAQTGETE 476
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 159/304 (52%), Gaps = 3/304 (0%)
Query: 156 REAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSAL 215
+EA++LF + L D+ T V C G L + G+Q+H ++ D+V VG++L
Sbjct: 75 KEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSL 134
Query: 216 VDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDD 275
VDMY K +++ VF M +NVVSWT++L GY NG ++FC MQ G+ P+
Sbjct: 135 VDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNR 194
Query: 276 FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNE 335
+T+ +VI++ N + G Q H + G I V N+L++ Y + G + D+ +F++
Sbjct: 195 YTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDK 254
Query: 336 MNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG 395
M +RD V+W ++++GY + G+ E ++F KM G+KP +T V+ +C A L E
Sbjct: 255 MEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSC--ASLRELA 312
Query: 396 R-HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
+ + G T ++ LS+ +++A S + M + + W ++S C
Sbjct: 313 LVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGC 372
Query: 455 RIHG 458
+G
Sbjct: 373 LQNG 376
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 112/207 (54%), Gaps = 2/207 (0%)
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
+L Y ++ ++EA+ +F ++ + ++PD+ TL V + CA + G Q H + + G
Sbjct: 64 LLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFG 123
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
L+ ++V +LV Y K N+ D R+F+EM R+ VSWT+L++GY+ G +LF
Sbjct: 124 LVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFC 183
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
+M G+ P+ T+ V++A G+V G ++VK +G + +I + SR
Sbjct: 184 QMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVK-HGFEEAIPVFNSLISLYSRL 242
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLS 452
G L +A+ +KM D + W ++++
Sbjct: 243 GMLRDARDVFDKMEI-RDWVTWNSMIA 268
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 265/648 (40%), Positives = 399/648 (61%), Gaps = 30/648 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+W L+I+ A G DA+ ++ M G R T+S++L + + L
Sbjct: 209 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVP-DRFTYSSVLSACTELGLLAL 267
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H +++ G V VG LVDMYAK
Sbjct: 268 GKQLHSRVIRLGLALDVCVGCSLVDMYAKCA----------------------------A 299
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNG-LEREAIDLFREMRLEGLAMDQFTFGS 179
G V++SR++F M + + +SWT +IT +Q+G ++EAI+LF +M + + F+F S
Sbjct: 300 DGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSS 359
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL ACG L G+Q++++ ++ VG++L+ MY + ++ A F + KN
Sbjct: 360 VLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKN 419
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+VS+ A++ GY +N SEEA +F + GI FT S++S A++ ++ +G Q HG
Sbjct: 420 LVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHG 479
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
R L G S + NAL++ Y +CGNIE + ++FNEM R+ +SWT++++G+AK G A
Sbjct: 480 RLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATR 539
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+++F KML G KP+E+T + VLSACS G++ +G+ +F M KE+GI P +HY CM+
Sbjct: 540 ALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMV 599
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L R+G L EA FIN MP DA+ W TLL +CR+HGN E+G+ AAE +LE +P +PA
Sbjct: 600 DLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPA 659
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+Y+LLS+++AS G+W V ++R++M+E+ + K+ GCSWI+ ++RVH F + S P + Q
Sbjct: 660 AYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQ 719
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY EL++L K+ + GY+PD VLHD+E +K + L HSEK+A+AFGL+ PIR
Sbjct: 720 IYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIR 779
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ KNLRVC DCH A KYIS T REI+VRD+ RFH KNG CSC D+W
Sbjct: 780 IFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 827
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 146/460 (31%), Positives = 235/460 (51%), Gaps = 40/460 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW+ ++S A++ A+ + ML+ G + F+ ++ S+ +G I
Sbjct: 110 DLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYP-NEYCFAAVIRACSNANYAWVGEII 168
Query: 65 HGHILKFGF-GSYVFVGSPLVDMYAK-LGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
+G ++K G+ + V VG L+DM+ K G + A + FD++PE+N+V
Sbjct: 169 YGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLV------------- 215
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
+WT MIT Q G R+AIDLF +M L G D+FT+ SVL+
Sbjct: 216 ------------------TWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLS 257
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK---SIKYAESVFRTMAWKN 239
AC L L GKQ+H+ +IR +V VG +LVDMY KC S+ + VF M N
Sbjct: 258 ACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHN 317
Query: 240 VVSWTAMLVGYGQNG-CSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
V+SWTA++ Y Q+G C +EA+++FC M I P+ F+ SV+ +C NL+ G Q +
Sbjct: 318 VMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY 377
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
++ G+ S V N+L++ Y + G +ED+ + F+ + ++ VS+ A+V GYAK K+
Sbjct: 378 SYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSE 437
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
E LF ++ G+ T +LS + G + KG ++K G + +
Sbjct: 438 EAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNAL 496
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
I + SR G +E A N+M + I W ++++ HG
Sbjct: 497 ISMYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKHG 535
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 187/335 (55%), Gaps = 8/335 (2%)
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDK-DSISWTTMITGLMQNGLEREAIDLFR 163
E + V+ NT+I+ + G E +R +F GM +K D +SW+ M++ N +E +AI F
Sbjct: 76 ELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFL 135
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCK- 221
+M G +++ F +V+ AC G+ I+ F+++ + + +V VG L+DM+ K
Sbjct: 136 DMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKG 195
Query: 222 CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
+ A VF M +N+V+WT M+ + Q GC+ +A+ +F +M+ +G PD FT SV
Sbjct: 196 SGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSV 255
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKC---GNIEDSHRLFNEMNV 338
+S+C L L G Q H R + GL + V +LV Y KC G+++DS ++F +M
Sbjct: 256 LSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE 315
Query: 339 RDEVSWTALVSGYAKFGKAN-ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH 397
+ +SWTA+++ Y + G+ + E I+LF KM+S ++P+ + VL AC G
Sbjct: 316 HNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQ 375
Query: 398 YFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAK 432
+ VK GI ++ +I + +R+GR+E+A+
Sbjct: 376 VYSYAVK-LGIASVNCVGNSLISMYARSGRMEDAR 409
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 114/285 (40%), Gaps = 42/285 (14%)
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M + PD T ++ SC + + G H + + +GL V N L++ Y KCG+
Sbjct: 35 MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 94
Query: 326 IEDSHRLFNEM-NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
E + +F M N RD VSW+A+VS +A + I F ML G P+E V+
Sbjct: 95 TETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIR 154
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC-MIDILSR-AGRLEEAKSFINKMP--- 439
ACS A G + +VK G C +ID+ + +G L A +KMP
Sbjct: 155 ACSNANYAWVGEIIYGFVVKT-GYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERN 213
Query: 440 -------------------------------FPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
+ PD ++++LS+C G + +GK
Sbjct: 214 LVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHS 273
Query: 469 SL----LELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
+ L LD S V + + A+ G D ++ M E V
Sbjct: 274 RVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNV 318
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 261/644 (40%), Positives = 403/644 (62%), Gaps = 38/644 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNL---MLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQ 63
V WNL++ ++G ++D K ++L M+ G+ + T+ +L + ++LG Q
Sbjct: 311 VLWNLML---VAYGQISDLAKSFDLFCQMVAAGV-RPNEFTYPCLLRTCTYAGEINLGEQ 366
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
IH +K GF S ++V L+DMY+K G +
Sbjct: 367 IHLLSIKTGFESDMYVSGVLIDMYSKYGWL------------------------------ 396
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
+++RR+ ++ KD +SWT+MI G +Q+ +EA++ F++M+L G+ D S ++A
Sbjct: 397 -DKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISA 455
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C G+ A+ +G+QIH+ + + + +V + +ALV++Y +C K A S+F + K+ ++W
Sbjct: 456 CAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITW 515
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
M+ G+ Q+G EEA+++F M + G++ + FT S IS+ ANLA +++G Q H +
Sbjct: 516 NGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIK 575
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
TG S V+NAL++ YGKCG+IED+ F EM+ R+ VSW +++ ++ G E +DL
Sbjct: 576 TGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDL 635
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F++M GLKP++VT IGVL+ACS GLVE+G YF+ M E+GI P DHY C++DIL
Sbjct: 636 FDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILG 695
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
RAG+L+ A+ F+ +MP +A+ W TLLS+CR+H N+EIG+ AA+ LLEL+P++ ASYVL
Sbjct: 696 RAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVL 755
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LS+ YA GKW +R+ M+++GVRK+PG SWI+ K+ VH F D P + QIY
Sbjct: 756 LSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKY 815
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
L L+ ++ K GY+ + H+ E +K HSEKLA+AFGL+ +PP +P+RV+KN
Sbjct: 816 LADLDDRLAKIGYIQGNYFLFHEKEKEQKDPTAFVHSEKLAVAFGLMSLPPSMPLRVIKN 875
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LRVC+DCH K+ S++ REI++RD RFH F NG CSCGDFW
Sbjct: 876 LRVCNDCHTWMKFTSEVMGREIVLRDVYRFHHFNNGNCSCGDFW 919
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 131/470 (27%), Positives = 235/470 (50%), Gaps = 40/470 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP+ D V++N LIS HA G+ A++++ M G +T +++L +S ++
Sbjct: 204 MPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGW-TPDCVTIASLLAACASIGDLNK 262
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H ++LK G + L+D+Y K G+I +A F N+V+
Sbjct: 263 GKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVL---------- 312
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
W M+ Q ++ DLF +M G+ ++FT+ +
Sbjct: 313 ---------------------WNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCL 351
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C + G+QIH I+ + +++V L+DMY K + A + + K+V
Sbjct: 352 LRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDV 411
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWT+M+ GY Q+ +EA++ F +MQ GI PD+ L S IS+CA + ++ +G Q H R
Sbjct: 412 VSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSR 471
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
V+G + +++ NALV Y +CG +++ LF + +D+++W +VSG+A+ G E
Sbjct: 472 VYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEA 531
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+++F KM G+K + T + +SA + +++G+ ++K G + +I
Sbjct: 532 LEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKT-GCTSETEVANALIS 590
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL 470
+ + G +E+AK +M + + W T+++SC HG W E+L
Sbjct: 591 LYGKCGSIEDAKMQFFEMS-ERNHVSWNTIITSCSQHG------WGLEAL 633
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 216/449 (48%), Gaps = 36/449 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW ++SG+A +G +AV +Y+ M G+ + S++L + + GR +
Sbjct: 107 DNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYV-LSSVLSACTKAALFEQGRLV 165
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H + K G S VG+ L+ +Y LR G +
Sbjct: 166 HAQVYKQGSCSETVVGNALIALY-------------------------------LRFGSL 194
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ R+F M D +++ T+I+ Q G A+++F EMRL G D T S+L AC
Sbjct: 195 SLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAAC 254
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+ L +GKQ+H+++++ + + +L+D+Y KC I A +F++ NVV W
Sbjct: 255 ASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWN 314
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
MLV YGQ ++ +FC M G+ P++FT ++ +C + G Q H S+ T
Sbjct: 315 LMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKT 374
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G S + VS L+ Y K G ++ + R+ + +D VSWT++++GY + E ++ F
Sbjct: 375 GFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETF 434
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH-YFEIMVKEYGIRPIHDHYTCMIDILS 423
+ M G+ PD + L +SAC+ + +G+ + + V Y + ++++ +
Sbjct: 435 KDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADV--SIWNALVNLYA 492
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLS 452
R GR +EA S + D I W ++S
Sbjct: 493 RCGRSKEAFSLFEAIEH-KDKITWNGMVS 520
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 207/433 (47%), Gaps = 42/433 (9%)
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
IH + G G G+ L+D+YAK GL+ A+R F++L ++ V + M++G R GL
Sbjct: 64 IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGL 123
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
E EA+ L+ +M G+ + SVL+A
Sbjct: 124 GE-------------------------------EAVGLYHQMHCSGVVPTPYVLSSVLSA 152
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C E+G+ +HA + + VG+AL+ +Y + S+ AE VF M + + V++
Sbjct: 153 CTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTF 212
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
++ + Q G E A++IF M+ +G PD T+ S++++CA++ L +G Q H L
Sbjct: 213 NTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLK 272
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
G+ + +L+ Y KCG I ++ +F + + V W ++ Y + ++ DL
Sbjct: 273 AGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDL 332
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT--CMIDI 421
F +M++ G++P+E T +L C+ AG + G + +K G D Y +ID+
Sbjct: 333 FCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKT-GFES--DMYVSGVLIDM 389
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN--PA 479
S+ G L++A+ + + D + W ++++ H E K A E+ ++ + P
Sbjct: 390 YSKYGWLDKARRILEVLE-AKDVVSWTSMIAGYVQH---EFCKEALETFKDMQLFGIWPD 445
Query: 480 SYVLLSSIYASKG 492
+ L S+I A G
Sbjct: 446 NIGLASAISACAG 458
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 149/299 (49%), Gaps = 2/299 (0%)
Query: 134 MKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC-GGLLALEE 192
M + + S +TG + + + + LF + + F L C G +
Sbjct: 1 MTRRAAASLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPL 60
Query: 193 GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
IHA I ++ G+ L+D+Y K ++ A VF ++ ++ VSW AML GY +
Sbjct: 61 VPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYAR 120
Query: 253 NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITV 312
NG EEAV ++ M +G+ P + L SV+S+C A E+G H + G S V
Sbjct: 121 NGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVV 180
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGL 372
NAL+ Y + G++ + R+F+EM D V++ L+S +A+ G +++FE+M G
Sbjct: 181 GNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGW 240
Query: 373 KPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEA 431
PD VT+ +L+AC+ G + KG+ ++K G+ P + ++D+ + G + EA
Sbjct: 241 TPDCVTIASLLAACASIGDLNKGKQLHSYLLKA-GMSPDYIIEGSLLDLYVKCGVIVEA 298
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 265/648 (40%), Positives = 398/648 (61%), Gaps = 30/648 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+W L+I+ A G DA+ ++ M G R T+S++L + + L
Sbjct: 11 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVP-DRFTYSSVLSACTELGLLAL 69
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H +++ G V VG LVDMYAK
Sbjct: 70 GKQLHSRVIRLGLALDVCVGCSLVDMYAKCA----------------------------A 101
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNG-LEREAIDLFREMRLEGLAMDQFTFGS 179
G V++SR++F M + + +SWT +IT Q+G ++EAI+LF +M + + F+F S
Sbjct: 102 DGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSS 161
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL ACG L G+Q++++ ++ VG++L+ MY + ++ A F + KN
Sbjct: 162 VLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKN 221
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+VS+ A++ GY +N SEEA +F + GI FT S++S A++ ++ +G Q HG
Sbjct: 222 LVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHG 281
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
R L G S + NAL++ Y +CGNIE + ++FNEM R+ +SWT++++G+AK G A
Sbjct: 282 RLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATR 341
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+++F KML G KP+E+T + VLSACS G++ +G+ +F M KE+GI P +HY CM+
Sbjct: 342 ALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMV 401
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L R+G L EA FIN MP DA+ W TLL +CR+HGN E+G+ AAE +LE +P +PA
Sbjct: 402 DLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPA 461
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+Y+LLS+++AS G+W V ++R++M+E+ + K+ GCSWI+ ++RVH F + S P + Q
Sbjct: 462 AYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQ 521
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY EL++L K+ + GY+PD VLHD+E +K + L HSEK+A+AFGL+ PIR
Sbjct: 522 IYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIR 581
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ KNLRVC DCH A KYIS T REI+VRD+ RFH KNG CSC D+W
Sbjct: 582 IFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 629
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 116/334 (34%), Positives = 184/334 (55%), Gaps = 6/334 (1%)
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
++F M +++ ++WT MIT Q G R+AIDLF +M L G D+FT+ SVL+AC L
Sbjct: 6 KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 65
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK---SIKYAESVFRTMAWKNVVSWTA 245
L GKQ+H+ +IR +V VG +LVDMY KC S+ + VF M NV+SWTA
Sbjct: 66 LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 125
Query: 246 MLVGYGQNG-CSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++ Y Q+G C +EA+++FC M I P+ F+ SV+ +C NL+ G Q + ++
Sbjct: 126 IITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL 185
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G+ S V N+L++ Y + G +ED+ + F+ + ++ VS+ A+V GYAK K+ E LF
Sbjct: 186 GIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 245
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
++ G+ T +LS + G + KG ++K G + +I + SR
Sbjct: 246 NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNALISMYSR 304
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
G +E A N+M + I W ++++ HG
Sbjct: 305 CGNIEAAFQVFNEME-DRNVISWTSMITGFAKHG 337
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 120/209 (57%), Gaps = 5/209 (2%)
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN 287
A VF M +N+V+WT M+ + Q GC+ +A+ +F +M+ +G PD FT SV+S+C
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKC---GNIEDSHRLFNEMNVRDEVSW 344
L L G Q H R + GL + V +LV Y KC G+++DS ++F +M + +SW
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 345 TALVSGYAKFGKAN-ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
TA+++ YA+ G+ + E I+LF KM+S ++P+ + VL AC G + V
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAK 432
K GI ++ +I + +R+GR+E+A+
Sbjct: 184 K-LGIASVNCVGNSLISMYARSGRMEDAR 211
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 265/648 (40%), Positives = 399/648 (61%), Gaps = 30/648 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+W L+I+ A G DA+ ++ M G R T+S++L + + L
Sbjct: 191 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVP-DRFTYSSVLSACTELGLLAL 249
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H +++ G V VG LVDMYAK
Sbjct: 250 GKQLHSRVIRLGLALDVCVGCSLVDMYAKCA----------------------------A 281
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNG-LEREAIDLFREMRLEGLAMDQFTFGS 179
G V++SR++F M + + +SWT +IT +Q+G ++EAI+LF +M + + F+F S
Sbjct: 282 DGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSS 341
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL ACG L G+Q++++ ++ VG++L+ MY + ++ A F + KN
Sbjct: 342 VLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKN 401
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+VS+ A++ GY +N SEEA +F + GI FT S++S A++ ++ +G Q HG
Sbjct: 402 LVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHG 461
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
R L G S + NAL++ Y +CGNIE + ++FNEM R+ +SWT++++G+AK G A
Sbjct: 462 RLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATR 521
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+++F KML G KP+E+T + VLSACS G++ +G+ +F M KE+GI P +HY CM+
Sbjct: 522 ALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMV 581
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L R+G L EA FIN MP DA+ W TLL +CR+HGN E+G+ AAE +LE +P +PA
Sbjct: 582 DLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPA 641
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+Y+LLS+++AS G+W V ++R++M+E+ + K+ GCSWI+ ++RVH F + S P + Q
Sbjct: 642 AYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQ 701
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY EL++L K+ + GY+PD VLHD+E +K + L HSEK+A+AFGL+ PIR
Sbjct: 702 IYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIR 761
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ KNLRVC DCH A KYIS T REI+VRD+ RFH KNG CSC D+W
Sbjct: 762 IFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 809
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 146/460 (31%), Positives = 235/460 (51%), Gaps = 40/460 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW+ ++S A++ A+ + ML+ G + F+ ++ S+ +G I
Sbjct: 92 DLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYP-NEYCFAAVIRACSNANYAWVGEII 150
Query: 65 HGHILKFGF-GSYVFVGSPLVDMYAK-LGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
+G ++K G+ + V VG L+DM+ K G + A + FD++PE+N+V
Sbjct: 151 YGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLV------------- 197
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
+WT MIT Q G R+AIDLF +M L G D+FT+ SVL+
Sbjct: 198 ------------------TWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLS 239
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK---SIKYAESVFRTMAWKN 239
AC L L GKQ+H+ +IR +V VG +LVDMY KC S+ + VF M N
Sbjct: 240 ACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHN 299
Query: 240 VVSWTAMLVGYGQNG-CSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
V+SWTA++ Y Q+G C +EA+++FC M I P+ F+ SV+ +C NL+ G Q +
Sbjct: 300 VMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY 359
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
++ G+ S V N+L++ Y + G +ED+ + F+ + ++ VS+ A+V GYAK K+
Sbjct: 360 SYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSE 419
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
E LF ++ G+ T +LS + G + KG ++K G + +
Sbjct: 420 EAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNAL 478
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
I + SR G +E A N+M + I W ++++ HG
Sbjct: 479 ISMYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKHG 517
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 187/335 (55%), Gaps = 8/335 (2%)
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDK-DSISWTTMITGLMQNGLEREAIDLFR 163
E + V+ NT+I+ + G E +R +F GM +K D +SW+ M++ N +E +AI F
Sbjct: 58 ELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFL 117
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCK- 221
+M G +++ F +V+ AC G+ I+ F+++ + + +V VG L+DM+ K
Sbjct: 118 DMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKG 177
Query: 222 CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
+ A VF M +N+V+WT M+ + Q GC+ +A+ +F +M+ +G PD FT SV
Sbjct: 178 SGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSV 237
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKC---GNIEDSHRLFNEMNV 338
+S+C L L G Q H R + GL + V +LV Y KC G+++DS ++F +M
Sbjct: 238 LSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE 297
Query: 339 RDEVSWTALVSGYAKFGKAN-ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH 397
+ +SWTA+++ Y + G+ + E I+LF KM+S ++P+ + VL AC G
Sbjct: 298 HNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQ 357
Query: 398 YFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAK 432
+ VK GI ++ +I + +R+GR+E+A+
Sbjct: 358 VYSYAVK-LGIASVNCVGNSLISMYARSGRMEDAR 391
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 114/285 (40%), Gaps = 42/285 (14%)
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M + PD T ++ SC + + G H + + +GL V N L++ Y KCG+
Sbjct: 17 MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 76
Query: 326 IEDSHRLFNEM-NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
E + +F M N RD VSW+A+VS +A + I F ML G P+E V+
Sbjct: 77 TETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIR 136
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC-MIDILSR-AGRLEEAKSFINKMP--- 439
ACS A G + +VK G C +ID+ + +G L A +KMP
Sbjct: 137 ACSNANYAWVGEIIYGFVVKT-GYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERN 195
Query: 440 -------------------------------FPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
+ PD ++++LS+C G + +GK
Sbjct: 196 LVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHS 255
Query: 469 SL----LELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
+ L LD S V + + A+ G D ++ M E V
Sbjct: 256 RVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNV 300
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 265/648 (40%), Positives = 398/648 (61%), Gaps = 30/648 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+W L+I+ A G DA+ ++ M G R T+S++L + + L
Sbjct: 16 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVP-DRFTYSSVLSACTELGLLAL 74
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H +++ G V VG LVDMYAK
Sbjct: 75 GKQLHSRVIRLGLALDVCVGCSLVDMYAKCA----------------------------A 106
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNG-LEREAIDLFREMRLEGLAMDQFTFGS 179
G V++SR++F M + + +SWT +IT Q+G ++EAI+LF +M + + F+F S
Sbjct: 107 DGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSS 166
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL ACG L G+Q++++ ++ VG++L+ MY + ++ A F + KN
Sbjct: 167 VLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKN 226
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+VS+ A++ GY +N SEEA +F + GI FT S++S A++ ++ +G Q HG
Sbjct: 227 LVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHG 286
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
R L G S + NAL++ Y +CGNIE + ++FNEM R+ +SWT++++G+AK G A
Sbjct: 287 RLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATR 346
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+++F KML G KP+E+T + VLSACS G++ +G+ +F M KE+GI P +HY CM+
Sbjct: 347 ALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMV 406
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L R+G L EA FIN MP DA+ W TLL +CR+HGN E+G+ AAE +LE +P +PA
Sbjct: 407 DLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPA 466
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+Y+LLS+++AS G+W V ++R++M+E+ + K+ GCSWI+ ++RVH F + S P + Q
Sbjct: 467 AYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQ 526
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY EL++L K+ + GY+PD VLHD+E +K + L HSEK+A+AFGL+ PIR
Sbjct: 527 IYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIR 586
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ KNLRVC DCH A KYIS T REI+VRD+ RFH KNG CSC D+W
Sbjct: 587 IFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 634
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 116/334 (34%), Positives = 184/334 (55%), Gaps = 6/334 (1%)
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
++F M +++ ++WT MIT Q G R+AIDLF +M L G D+FT+ SVL+AC L
Sbjct: 11 KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 70
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK---SIKYAESVFRTMAWKNVVSWTA 245
L GKQ+H+ +IR +V VG +LVDMY KC S+ + VF M NV+SWTA
Sbjct: 71 LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 130
Query: 246 MLVGYGQNG-CSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++ Y Q+G C +EA+++FC M I P+ F+ SV+ +C NL+ G Q + ++
Sbjct: 131 IITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL 190
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G+ S V N+L++ Y + G +ED+ + F+ + ++ VS+ A+V GYAK K+ E LF
Sbjct: 191 GIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 250
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
++ G+ T +LS + G + KG ++K G + +I + SR
Sbjct: 251 NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNALISMYSR 309
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
G +E A N+M + I W ++++ HG
Sbjct: 310 CGNIEAAFQVFNEME-DRNVISWTSMITGFAKHG 342
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 120/209 (57%), Gaps = 5/209 (2%)
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN 287
A VF M +N+V+WT M+ + Q GC+ +A+ +F +M+ +G PD FT SV+S+C
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKC---GNIEDSHRLFNEMNVRDEVSW 344
L L G Q H R + GL + V +LV Y KC G+++DS ++F +M + +SW
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128
Query: 345 TALVSGYAKFGKAN-ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
TA+++ YA+ G+ + E I+LF KM+S ++P+ + VL AC G + V
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAK 432
K GI ++ +I + +R+GR+E+A+
Sbjct: 189 K-LGIASVNCVGNSLISMYARSGRMEDAR 216
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 250/598 (41%), Positives = 382/598 (63%), Gaps = 5/598 (0%)
Query: 55 RRCVDLG-----RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIV 109
+ C+ LG +Q+H I+ G F+ + L++ Y+KLG + F +P +N++
Sbjct: 70 QSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMPRRNVM 129
Query: 110 MYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG 169
+N +I G L+ G +E +++LF M +++ +W MI GL Q ++A+ LF+EM G
Sbjct: 130 SFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLG 189
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
D+FT GSVL C GL +L G+++HA +++ + + VGS+L MY K S+ E
Sbjct: 190 FLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGE 249
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
+ ++M + VV+W ++ G QNGC EE + + M+ G PD T SV+S+C+ LA
Sbjct: 250 KLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELA 309
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
+L +G Q H + G S + V ++L++ Y + G +EDS + F + D V W+++++
Sbjct: 310 TLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIA 369
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
Y G+ E ++LF +M ++ +EVT + +L ACS +GL EKG YF++MVK+Y ++
Sbjct: 370 AYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLK 429
Query: 410 PIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAES 469
P +HYTC++D+L RAGRLEEA+ I MP PD I W TLL++C++H E+ + +E
Sbjct: 430 PRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERISEE 489
Query: 470 LLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSA 529
+++LDP + ASYVLLS+I+AS W +VSQ+R+ MR++ VRK+PG SW++ K+ VH FS
Sbjct: 490 IIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELKNLVHQFSM 549
Query: 530 DDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGL 589
D S P +I L++L ++ + GYVP++ SVLHD++ EK L HHSEK AIAF L
Sbjct: 550 GDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHSEKFAIAFAL 609
Query: 590 LFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ +PIRV+KNLRVC DCHNA K IS+I REI+VRDA RFH FK+GECSCG++W
Sbjct: 610 MNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFKDGECSCGNYW 667
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 167/347 (48%), Gaps = 39/347 (11%)
Query: 147 TGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHK 206
T L +G ++A D F + D F +L +C L +L GKQ+H+ II +
Sbjct: 39 TSLCNDGRIKQAYDTFTS----EIWSDPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGS 94
Query: 207 DNVFVGSALVDMYCKCKSIK-------------------------------YAESVFRTM 235
+ F+ + L++ Y K K A+ +F M
Sbjct: 95 KDKFISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEM 154
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
+ +N+ +W AM+ G Q +++A+ +F M G PD+FTLGSV+ CA L SL G
Sbjct: 155 SERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQ 214
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
+ H L G V ++L Y K G++ D +L M +R V+W L++G A+ G
Sbjct: 215 EVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNG 274
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
E ++ + M G +PD++T + VLSACS + +G+ ++K G +
Sbjct: 275 CPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKA-GASSVLAVV 333
Query: 416 TCMIDILSRAGRLEEA-KSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+ +I + SR+G LE++ K+F+++ F D + W++++++ HG E
Sbjct: 334 SSLISMYSRSGCLEDSIKAFVDRENF--DVVLWSSMIAAYGFHGRGE 378
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 163/347 (46%), Gaps = 36/347 (10%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNL-SRITFSTMLIMSSSRRCVDLGRQIH 65
+WN +I+G A+ ++ M GLG L T ++L + R + G+++H
Sbjct: 160 ATWNAMIAGLTQFEFNKQALSLFKEMY--GLGFLPDEFTLGSVLRGCAGLRSLLAGQEVH 217
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
+LK GF VGS L MY K G + D ++ +P + +V +NT+I
Sbjct: 218 ACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLI---------- 267
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
G QNG E ++ + M++ G D+ TF SVL+AC
Sbjct: 268 ---------------------AGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACS 306
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
L L +G+QIHA +I+ + V S+L+ MY + ++ + F +VV W++
Sbjct: 307 ELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSS 366
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT- 304
M+ YG +G EEA+++F M+ +E ++ T S++ +C++ E+GT++ +
Sbjct: 367 MIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKY 426
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
L I +V G+ G +E++ + M V+ D + W L++
Sbjct: 427 KLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAA 473
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 88/169 (52%), Gaps = 5/169 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP V+WN LI+G A +G + + YN+M G +ITF ++L S +
Sbjct: 255 MPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGF-RPDKITFVSVLSACSELATLGQ 313
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIH ++K G S + V S L+ MY++ G + D+ + F + ++V++++MI
Sbjct: 314 GQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGF 373
Query: 121 RGLVEESRRLFRGMKD----KDSISWTTMITGLMQNGLEREAIDLFREM 165
G EE+ LF M+D + +++ +++ +GL+ + + F M
Sbjct: 374 HGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLM 422
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 260/682 (38%), Positives = 415/682 (60%), Gaps = 36/682 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSW +++ G G DAVK + M+ +GL S+ + +L ++ +
Sbjct: 123 MPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAP-SQFMLTNVLSSCAATEARGI 181
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR++H ++K G S V V + ++ MY K G A+ F+ + ++ +N M++
Sbjct: 182 GRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTH 241
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLF-REMRLEGLAMDQFTFGS 179
+G ++ + +F M+++ +SW +I G QNGL+ A+ F R + + D+FT S
Sbjct: 242 QGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTS 301
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI-------------- 225
VL+AC L L+ GKQ+H++I+R + + +AL+ Y K S+
Sbjct: 302 VLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVAD 361
Query: 226 -------------------KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM 266
K A VF M ++V++WTAM+VGY QNG ++EA+++F +M
Sbjct: 362 LNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSM 421
Query: 267 QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
R+G EP+ TL +V+S+CA+LA L G Q H R++ + ++VSNA++T Y + G++
Sbjct: 422 IRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSV 481
Query: 327 EDSHRLFNEMNVRDE-VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+ R+F+++ R E V+WT+++ A+ G + I LFE+ML G+KPD VT IGV SA
Sbjct: 482 PLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSA 541
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
C+ AG ++KG+ Y+E M+ E+GI P HY CM+D+L+RAG L EA FI +MP PD +
Sbjct: 542 CTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTV 601
Query: 446 GWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
W +LL++CR+ N ++ + AAE LL +DP N +Y L+++Y++ G+W+ +++ + +
Sbjct: 602 VWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSALANVYSACGRWNDAARIWKLRK 661
Query: 506 EKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLH 565
+K V+K+ G SW +S+VH+F ADD P D I + ++ ++ K G+VPD++SVLH
Sbjct: 662 DKAVKKETGFSWTHVQSKVHVFGADDVLHPQRDAICKKAAEMWEEIKKAGFVPDLNSVLH 721
Query: 566 DVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREI 625
DV+ K ++L+ HSEKLAIAFGL+ P +R++KNLRVC+DCH A K+ISK+ REI
Sbjct: 722 DVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISKVVDREI 781
Query: 626 LVRDAVRFHLFKNGECSCGDFW 647
+VRDA RFH F++G CSC D+W
Sbjct: 782 IVRDATRFHHFRDGYCSCKDYW 803
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 135/489 (27%), Positives = 244/489 (49%), Gaps = 80/489 (16%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGL----IYDAKRGF 100
F+ +L +S + GR IH H +K G ++ + L+ YA+ G+ ++A+R F
Sbjct: 28 FARLLQLSQTAVNPSAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLF 87
Query: 101 DELP--EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREA 158
D++P +N +N++++ + G + ++R +F M ++D++SWT M+ GL + G +A
Sbjct: 88 DDIPYARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDA 147
Query: 159 IDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDM 218
+ F +M EGLA QF +VL++C A G+++H+F+I+ V V ++++ M
Sbjct: 148 VKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYM 207
Query: 219 YCKCKSIKYAESVFRTM------AW-------------------------KNVVSWTAML 247
Y KC + A +VF M +W +++VSW A++
Sbjct: 208 YGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAII 267
Query: 248 VGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
GY QNG + A+K F M + +EPD+FT+ SV+S+CANL L+ G Q H L TG+
Sbjct: 268 AGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGM 327
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRL---------------------------------F 333
+ NAL++ Y K G++E + R+ F
Sbjct: 328 PYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVF 387
Query: 334 NEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVE 393
+ MN RD ++WTA++ GY + G+ +E ++LF M+ G +P+ TL VLSAC+ +
Sbjct: 388 DVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLG 447
Query: 394 KGRHYFEIMVKEYGIRPIHDHYT----CMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
G+ + IR + + +I + +R+G + A+ +++ + + + W +
Sbjct: 448 YGKQ-----IHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTS 502
Query: 450 LLSSCRIHG 458
++ + HG
Sbjct: 503 MIVALAQHG 511
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 156/338 (46%), Gaps = 41/338 (12%)
Query: 206 KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCN 265
+ N F ++L+ MY K + A VF M ++ VSWT M+VG + G +AVK F +
Sbjct: 94 RRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLD 153
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M G+ P F L +V+SSCA + G + H + GL S + V+N+++ YGKCG+
Sbjct: 154 MVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGD 213
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM------------------ 367
E + +F M VR E SW A+VS Y G+ + + +FE M
Sbjct: 214 AETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQN 273
Query: 368 --------------LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
+ ++PDE T+ VLSAC+ +++ G+ +++ G+
Sbjct: 274 GLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRT-GMPYSSQ 332
Query: 414 HYTCMIDILSRAGRLEEAKSFINKMPFPP-DAIGWATLLSSCRIHGNVEIG--KWAAESL 470
+I +++G +E A+ ++K + I + LL G V++G K A E
Sbjct: 333 IMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALL-----EGYVKLGDTKQAREVF 387
Query: 471 LELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
++ + ++ + Y G+ D +L R+M G
Sbjct: 388 DVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSG 425
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 267/689 (38%), Positives = 407/689 (59%), Gaps = 56/689 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTML-----IMSSSRRCVD 59
D V +N +I+G + + A+ ++ M +G TF+++L + ++CV
Sbjct: 112 DTVMYNAMITGFSHNNDGYSAINLFCKMKHEGF-KPDNFTFASVLAGLALVADDEKQCV- 169
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLG----LIYDAKRGFDELPEKNIVMYNTMI 115
Q H LK G G V + LV +Y+K L++ A++ FDE+ EK+ + TM+
Sbjct: 170 ---QFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMM 226
Query: 116 TGLLRRGLVEESRRLFRGMKDK-DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
TG ++ G + L GM D +++ MI+G + G +EA+++ R M G+ +D+
Sbjct: 227 TGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDE 286
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRND----HKDNVFVGSALVDMYCKCKSIKYAES 230
FT+ SV+ AC L+ GKQ+HA+++R + H DN +LV +Y KC A +
Sbjct: 287 FTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDN-----SLVSLYYKCGKFDEARA 341
Query: 231 VFRTMAWKNVVSWTAMLVGY-------------------------------GQNGCSEEA 259
+F M K++VSW A+L GY +NG EE
Sbjct: 342 IFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEG 401
Query: 260 VKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTF 319
+K+F M+R G EP D+ I SCA L + G Q+H + L G S ++ NAL+T
Sbjct: 402 LKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITM 461
Query: 320 YGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTL 379
Y KCG +E++ ++F M D VSW AL++ + G E +D++E+ML G++PD +TL
Sbjct: 462 YAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITL 521
Query: 380 IGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP 439
+ VL+ACS AGLV++GR YF+ M Y I P DHY +ID+L R+G+ +A+S I +P
Sbjct: 522 LTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLP 581
Query: 440 FPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQ 499
F P A W LLS CR+HGN+E+G AA+ L L P + +Y+LLS+++A+ G+W+ V++
Sbjct: 582 FKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVAR 641
Query: 500 LRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPD 559
+R+ MR++GV+K+ CSWI+ +++VH F DD S P ++ +Y L+ L ++M + GYVPD
Sbjct: 642 VRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPD 701
Query: 560 MSSVLHDVELS-EKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYIS 618
S VLHDVE K ML HSEK+A+AFGL+ +PPG IR+ KNLR C DCHN +++S
Sbjct: 702 TSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLS 761
Query: 619 KITQREILVRDAVRFHLFKNGECSCGDFW 647
+ QR+I++RD RFH F+NGECSCG+FW
Sbjct: 762 WVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 138/490 (28%), Positives = 219/490 (44%), Gaps = 75/490 (15%)
Query: 41 SRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF 100
+R + L + R + L R +HG+I+ FGF + + L+D+Y K + A++ F
Sbjct: 13 NRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLF 72
Query: 101 DELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKD--KDSISWTTMITGLMQNGLEREA 158
DE+ E + + TM++G G + +R +F +D++ + MITG N A
Sbjct: 73 DEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSA 132
Query: 159 IDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGK--QIHAFIIRNDHKDNVFVGSALV 216
I+LF +M+ EG D FTF SVL L+A +E + Q HA +++ V +ALV
Sbjct: 133 INLFCKMKHEGFKPDNFTFASVLAGL-ALVADDEKQCVQFHAAALKSGAGYITSVSNALV 191
Query: 217 DMYCKCKS----IKYAESVFRTMAWKNVVSWTAMLVGYGQN------------------- 253
+Y KC S + A VF + K+ SWT M+ GY +N
Sbjct: 192 SVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKL 251
Query: 254 -------------GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
G +EA+++ M +GIE D+FT SVI +CA L+ G Q H
Sbjct: 252 VAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAY 311
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY--------- 351
L SF N+LV+ Y KCG +++ +F +M +D VSW AL+SGY
Sbjct: 312 VLRREDFSF-HFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEA 370
Query: 352 ----------------------AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
A+ G E + LF M G +P + G + +C+
Sbjct: 371 KLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVL 430
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
G G+ Y ++K G +I + ++ G +EEA+ MP D++ W
Sbjct: 431 GAYCNGQQYHAQLLK-IGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNA 488
Query: 450 LLSSCRIHGN 459
L+++ HG+
Sbjct: 489 LIAALGQHGH 498
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 120/287 (41%), Gaps = 75/287 (26%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLM---------------LKDGLGNLSRITF 45
MP D VSWN L+SG+ S G + +A ++ M ++G G F
Sbjct: 346 MPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLF 405
Query: 46 STM----------LIMSSSRRCVDL-----GRQIHGHILKFGFGSYVFVGSPLVDMYAKL 90
S M + + C L G+Q H +LK GF S + G+ L+ MYAK
Sbjct: 406 SCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKC 465
Query: 91 GLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLM 150
G++ +A++ F +P + V +N +I L
Sbjct: 466 GVVEEARQVFRTMPCLDSVSWN-------------------------------ALIAALG 494
Query: 151 QNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQ-------IHAFIIRN 203
Q+G EA+D++ EM +G+ D+ T +VLTAC +++G++ ++
Sbjct: 495 QHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGA 554
Query: 204 DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS-WTAMLVG 249
DH + L+D+ C+ AESV ++ +K W A+L G
Sbjct: 555 DHY------ARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSG 595
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 90/215 (41%), Gaps = 35/215 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN LI+ HG +AV VY MLK G+ RIT T+L S VD
Sbjct: 478 MPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGI-RPDRITLLTVLTACSHAGLVDQ 536
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKL-------GLIYDAKRGFDELPEKNIV-MYN 112
GR+ F V+ P D YA+L G DA+ + LP K ++
Sbjct: 537 GRKY------FDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWE 590
Query: 113 TMITGLLRRGLVE----ESRRLFRGMKDKDSISWTTMITGLMQ--NGLEREAIDLFREMR 166
+++G G +E + +LF + + D T M+ M G E + + MR
Sbjct: 591 ALLSGCRVHGNMELGIIAADKLFGLIPEHDG---TYMLLSNMHAATGQWEEVARVRKLMR 647
Query: 167 LEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFII 201
G+ + AC +E Q+H F++
Sbjct: 648 DRGVKKE--------VACSW---IEMETQVHTFLV 671
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 264/647 (40%), Positives = 402/647 (62%), Gaps = 17/647 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN ++SG+A +G V +A +++ D + + I+++ ML ++
Sbjct: 137 MPERDVVSWNAMLSGYAQNGYVKEAKEIF-----DEMPCKNSISWNGMLAAYVQNGRIED 191
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
R++ + S+ + ++ Y K + DA+ FD +PE++ V +NTMI+G +
Sbjct: 192 ARRLFESKADWELISW----NCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQ 247
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G + E++RLF +D +WT M++G +QNG+ EA +F M + + ++ ++
Sbjct: 248 NGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEK----NSVSWNAI 303
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ +++ +++ + NV + ++ Y + I A + F M ++
Sbjct: 304 IAGYVQCKRMDQARELFEAM----PCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDS 359
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SW A++ GY Q+G EEA+ +F M+R+G + T S +S+CA +A+LE G Q HGR
Sbjct: 360 ISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGR 419
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ GL S V NAL+ Y KCGNI+D++ +F + ++ VSW +++GYA+ G E
Sbjct: 420 VVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEA 479
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LFE M G+ PD+VT++GVLSACS GLV+KG YF M ++YGI HYTCMID
Sbjct: 480 LMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMID 539
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAGRL++A++ + MPF PDA W LL + RIHGN E+G+ AA+ + E++P N
Sbjct: 540 LLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGM 599
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS++YA+ G+W V ++R MR++GV+K PG SW++ ++++H F+ D P D+I
Sbjct: 600 YVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRI 659
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y LE+L+ KM KEGYV VLHDVE EK+ ML +HSEKLA+AFG+L IP G PIRV
Sbjct: 660 YTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRV 719
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+KNLRVC DCHNA K+ISKI R I++RD+ RFH F G+CSCGD+W
Sbjct: 720 IKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 766
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 106/478 (22%), Positives = 202/478 (42%), Gaps = 75/478 (15%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V WN+ I+ H +G + A++++N M + S I+++ M+ S L RQ+
Sbjct: 48 DIVKWNIAITNHMRNGQCDSALRLFNSMPRR-----SSISWNAMISGCLSNDKFYLARQL 102
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
F+++P +++V +N MI+G +R +
Sbjct: 103 -----------------------------------FEKMPTRDLVSWNVMISGCVRYRNL 127
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE------GLAMDQFTFG 178
+R LF M ++D +SW M++G QNG +EA ++F EM + G+ G
Sbjct: 128 RAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNG 187
Query: 179 SVLTA------------------CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYC 220
+ A GG + R +D V + ++ Y
Sbjct: 188 RIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEV-SWNTMISGYA 246
Query: 221 KCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGS 280
+ + A+ +F ++V +WTAM+ GY QNG +EA ++F M E + + +
Sbjct: 247 QNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMP----EKNSVSWNA 302
Query: 281 VISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD 340
+I+ +++ + + S+ N ++T Y + G+I + F+ M RD
Sbjct: 303 IIAGYVQCKRMDQARELFEAMPCQNVSSW----NTMITGYAQNGDIAQARNFFDRMPQRD 358
Query: 341 EVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
+SW A+++GYA+ G E + LF +M G + + T LS C+ +E G+
Sbjct: 359 SISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHG 418
Query: 401 IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+VK G+ ++ + + G +++A + + + W T+++ HG
Sbjct: 419 RVVKA-GLESGCYVGNALLVMYCKCGNIDDAYIVFEGIE-EKEVVSWNTMIAGYARHG 474
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 165/351 (47%), Gaps = 32/351 (9%)
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
+ +IV +N IT +R G + + RLF M + SISW MI+G + N A LF +
Sbjct: 46 DADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEK 105
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M D ++ +++ C L + + + D V +A++ Y +
Sbjct: 106 MPTR----DLVSWNVMISGCVRYRNLRAARLLFDQMPERD----VVSWNAMLSGYAQNGY 157
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+K A+ +F M KN +SW ML Y QNG E+A ++F + D+ L + +
Sbjct: 158 VKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFES-------KADWEL--ISWN 208
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVS-NALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
C ++ R + + VS N +++ Y + G + ++ RLF E VRD +
Sbjct: 209 CMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFT 268
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
WTA+VSGY + G +E +F+ M + + V+ +++ + +++ R FE M
Sbjct: 269 WTAMVSGYVQNGMLDEARRVFDGM----PEKNSVSWNAIIAGYVQCKRMDQARELFEAM- 323
Query: 404 KEYGIRPIHD--HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
P + + MI ++ G + +A++F ++MP D+I WA +++
Sbjct: 324 ------PCQNVSSWNTMITGYAQNGDIAQARNFFDRMP-QRDSISWAAIIA 367
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 265/643 (41%), Positives = 396/643 (61%), Gaps = 32/643 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSWN +I+G H + A+++ M K G+ + T S+ L + +LGRQ+
Sbjct: 176 DIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCP-NMFTLSSALKACAGMALRELGRQL 234
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H ++K GS F+G L+DMY+K N+M
Sbjct: 235 HSSLIKMDMGSDSFLGVGLIDMYSKC---------------------NSM---------- 263
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+++R +F+ M ++D I+W +I+G QN + EA LF M EG+ +Q T +VL +
Sbjct: 264 DDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSI 323
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L A +QIHA +++ + + +V ++L+D Y KC ++ A VF ++V +T
Sbjct: 324 AALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFT 383
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
+++ Y Q+G EEA++++ MQ GI+PD F S++++CA+L++ E+G Q H L
Sbjct: 384 SLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKF 443
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G +S I N+LV Y KCG+IED+ F+ + VR VSW+A++ G A+ G E + LF
Sbjct: 444 GFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLF 503
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
++ML G+ P+ +TL+ VL AC+ AGLV + +HYF M +GI P+ +HY CMID+L R
Sbjct: 504 KQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGR 563
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG+LE A +NKMPF +A+ W LL + RIH N+++G+ AAE LL L+P ++VLL
Sbjct: 564 AGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLLALEPEKSGTHVLL 623
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
++IYAS G WD V+++RR M++ V+K+PG SW++ K +V+ F D S S +IYA+L
Sbjct: 624 ANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSRSTEIYAKL 683
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
++L+ + K GYVP + LHDVE SEK ++L HHSEKLA+AFGL+ PPG PIRV KNL
Sbjct: 684 DELSDLLKKAGYVPMVEIDLHDVERSEKEQLLYHHSEKLAVAFGLIATPPGAPIRVKKNL 743
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R+C DCH K+ISKI REI+VRD RFH F+ G CSCG++W
Sbjct: 744 RICFDCHTVLKFISKIVSREIIVRDTNRFHHFREGSCSCGEYW 786
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 134/458 (29%), Positives = 232/458 (50%), Gaps = 34/458 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P VSWN L S + +AV +++ M+ G+ + + S+M+ + +
Sbjct: 71 IPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGI-RPNEFSLSSMINVCTGLEDSVQ 129
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR+IHG+++K G+ S F + LVDMYAK+G++ DA
Sbjct: 130 GRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASS---------------------- 167
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+F + D +SW +I G + + A++L REM G+ + FT S
Sbjct: 168 ---------VFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSA 218
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC G+ E G+Q+H+ +I+ D + F+G L+DMY KC S+ A VF+ M +++
Sbjct: 219 LKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDM 278
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
++W A++ G+ QN EEA +F M GI + TL +V+ S A L + Q H
Sbjct: 279 IAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHAL 338
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
SL +G V N+L+ YGKCG++ED+ R+F E + D V +T+LV+ YA+ G+ E
Sbjct: 339 SLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEA 398
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ L+ +M G+KPD +L+AC+ E+G+ + + ++G +++
Sbjct: 399 LRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQ-VHVHILKFGFMSDIFAGNSLVN 457
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ ++ G +E+A +++P + W+ ++ HG
Sbjct: 458 MYAKCGSIEDASCAFSRIPV-RGIVSWSAMIGGLAQHG 494
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 149/291 (51%), Gaps = 8/291 (2%)
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M L G+ ++F F SVL AC L GKQ+H ++ + FV ++LV +Y KC
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
A S+F + ++VVSW A+ Y + EAV +F +M +GI P++F+L S+I+
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
C L +G + HG + G S +NALV Y K G +ED+ +F+E+ D VSW
Sbjct: 121 CTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSW 180
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
A+++G + ++L +M G+ P+ TL L AC+ L E GR ++K
Sbjct: 181 NAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIK 240
Query: 405 -EYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ G D + +ID+ S+ +++A+ MP D I W ++S
Sbjct: 241 MDMG----SDSFLGVGLIDMYSKCNSMDDARLVFKLMP-ERDMIAWNAVIS 286
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 252/641 (39%), Positives = 403/641 (62%), Gaps = 3/641 (0%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN + GHA A+K+Y M+ GL S TF +L + + G+QIHGH+
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNS-YTFPFLLKSCAKSKAFKEGQQIHGHV 160
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
LK G+ +FV + L+ +Y + G + DA++ FD P +++V Y +I G RG +E ++
Sbjct: 161 LKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQ 220
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
+LF + KD +SW MI+G + G +EA++LF+EM + D+ T +V++AC
Sbjct: 221 KLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSG 280
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
++E G+Q+H++I + N+ + ++L+D+Y KC ++ A +F + +K+V+SW ++
Sbjct: 281 SIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIG 340
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG--RSLVTGL 306
GY +EA+ +F M R+G P+D T+ S++ +CA+L +++ G H +
Sbjct: 341 GYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSA 400
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ ++ +L+ Y KCG+IE +H++FN + + SW A++ G+A G+A+ D+F +
Sbjct: 401 TNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSR 460
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M G++PD++T +G+LSACSR+G+++ GRH F M ++Y I P +HY CMID+L +G
Sbjct: 461 MRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSG 520
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+EA+ IN M PD + W +LL +C+I GNVE+G+ A++L++++P NP YVLLS+
Sbjct: 521 LFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSN 580
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IYA+ G+W+ V+++R + +KG++K PGCS I+ S VH F D P + +IY LE+
Sbjct: 581 IYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEE 640
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
+ + K G+VPD S VL ++E K L HHSEKLAIAFGL+ PG + +VKNLRV
Sbjct: 641 MEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRV 700
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C +CH ATK ISKI +REI+ RD RFH F++G CSC D+W
Sbjct: 701 CRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 184/402 (45%), Gaps = 68/402 (16%)
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
+F +++ + + W TM G + A+ L+ M GL + +TF +L +C A
Sbjct: 90 VFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKA 149
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA---- 245
+EG+QIH +++ + ++FV ++L+ +Y + ++ A VF ++VVS+TA
Sbjct: 150 FKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKG 209
Query: 246 ---------------------------MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
M+ GY + G +EA+++F M + I PD+ T+
Sbjct: 210 YASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTM 269
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
+V+S+CA S+E G Q H G S + + N+L+ Y KCG +E + LF +
Sbjct: 270 VTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLY 329
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR-- 396
+D +SW L+ GY E + LF++ML G +P++VT++ +L AC+ G ++ GR
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWI 389
Query: 397 HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFIN-------------------- 436
H + I + T +ID+ ++ G +E A N
Sbjct: 390 HVY-IDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMH 448
Query: 437 --------------KMPFPPDAIGWATLLSSCRIHGNVEIGK 464
K+ PD I + LLS+C G +++G+
Sbjct: 449 GRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGR 490
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 200/436 (45%), Gaps = 77/436 (17%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSS---RRC 57
+P D VSWN +ISG+A G+ +A++++ M+K + R STM+ + S+
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNI----RPDESTMVTVVSACAQSGS 281
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
++LGRQ+H I GFGS + + + L+D+Y+K G + A F+ L K+++ +NT+I G
Sbjct: 282 IELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGG 341
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
+T M L +EA+ LF+EM G + T
Sbjct: 342 ------------------------YTHM-------NLYKEALLLFQEMLRSGERPNDVTM 370
Query: 178 GSVLTACGGLLALEEGKQIHAFIIR--NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
S+L AC L A++ G+ IH +I + + + ++L+DMY KC I+ A VF ++
Sbjct: 371 LSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSI 430
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
K++ SW AM+ G+ +G ++ A IF M++ GIEPDD T ++S+C+ L+ G
Sbjct: 431 LHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGR 490
Query: 296 Q-FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
F + + + ++ G G +++ + N M
Sbjct: 491 HIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNME----------------- 533
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
++PD V +L AC G VE G + + ++K P
Sbjct: 534 -----------------MEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENP--GC 574
Query: 415 YTCMIDILSRAGRLEE 430
Y + +I + AGR E
Sbjct: 575 YVLLSNIYATAGRWNE 590
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 147/307 (47%), Gaps = 39/307 (12%)
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYC---KCKSIKYAESVFRTM 235
S+L C L +L + IHA +I+ + + S L+++ + YA SVF T+
Sbjct: 38 SLLHNCKTLQSL---RLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETI 94
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
N++ W M G+ + A+K++ M G+ P+ +T ++ SCA + +EG
Sbjct: 95 QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQ 154
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL-------- 347
Q HG L G + V +L++ Y + G +ED+ ++F+ RD VS+TAL
Sbjct: 155 QIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRG 214
Query: 348 -----------------------VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
+SGYA+ G E ++LF++M+ ++PDE T++ V+S
Sbjct: 215 YIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVS 274
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDA 444
AC+++G +E GR + ++G ++D+ S+ G LE A + + D
Sbjct: 275 ACAQSGSIELGRQVHS-WIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLY-KDV 332
Query: 445 IGWATLL 451
I W TL+
Sbjct: 333 ISWNTLI 339
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Glycine max]
Length = 1047
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 267/641 (41%), Positives = 399/641 (62%), Gaps = 32/641 (4%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V WN+++ + ++N++ K++ M +G+ ++ T+ ++L SS R VDLG QIH
Sbjct: 439 VLWNVMLVAYGLLDNLNESFKIFTQMQMEGI-EPNQFTYPSILRTCSSLRAVDLGEQIHT 497
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+LK GF V+V S L+DMYAKLG + +
Sbjct: 498 QVLKTGFQFNVYVSSVLIDMYAKLGKL-------------------------------DH 526
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+ ++FR +K+KD +SWT MI G Q+ EA++LF+EM+ +G+ D F S ++AC G
Sbjct: 527 ALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAG 586
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+ AL +G+QIHA + + D++ VG+ALV +Y +C ++ A F + K+ +SW ++
Sbjct: 587 IQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSL 646
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ G+ Q+G EEA+ +F M + G E + FT G +S+ AN+A+++ G Q H + TG
Sbjct: 647 ISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGH 706
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
S VSN L+T Y KCGNI+D+ R F EM ++E+SW A+++GY++ G + + LFE
Sbjct: 707 DSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFED 766
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M G+ P+ VT +GVLSACS GLV++G YF+ M + +G+ P +HY C++D+L R+G
Sbjct: 767 MKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSG 826
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
L A+ F+ +MP PDA+ TLLS+C +H N++IG++AA LLEL+P + A+YVLLS+
Sbjct: 827 LLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLSN 886
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
+YA GKW + R+ M+++GV+K+PG SWI+ + VH F A D P D+IY L
Sbjct: 887 MYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLRD 946
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
LN + GY+P +S+L+D E +K HSEKLAIAFGLL + PI V KNLRV
Sbjct: 947 LNELAAENGYIPQTNSLLNDAERRQKGPTQIIHSEKLAIAFGLLSLSSSTPIHVFKNLRV 1006
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCHN KY+SKI+ R I+VRD+ RFH FK G CSC D+W
Sbjct: 1007 CGDCHNWIKYVSKISDRVIVVRDSYRFHHFKGGICSCKDYW 1047
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 140/461 (30%), Positives = 237/461 (51%), Gaps = 42/461 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW ++SG + G +AV ++ M G+ I FS++L + +G Q+
Sbjct: 235 DSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYI-FSSVLSACTKVEFYKVGEQL 293
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG +LK GF +V + LV +Y++LG A++
Sbjct: 294 HGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQ-------------------------- 327
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+F M +D +S+ ++I+GL Q G +A++LF++M L+ L D T S+L+AC
Sbjct: 328 -----VFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSAC 382
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+ AL GKQ H++ I+ ++ + AL+D+Y KC IK A F + +NVV W
Sbjct: 383 SSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWN 442
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
MLV YG E+ KIF MQ GIEP+ FT S++ +C++L +++ G Q H + L T
Sbjct: 443 VMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKT 502
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G + VS+ L+ Y K G ++ + ++F + +D VSWTA+++GYA+ K E ++LF
Sbjct: 503 GFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLF 562
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH-YFEIMVKEYGIRPIHDHYT---CMID 420
++M G+ D + +SAC+ + +G+ + + V Y D + ++
Sbjct: 563 KEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYS-----DDLSVGNALVS 617
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+ +R G++ +A +K+ F D I W +L+S G+ E
Sbjct: 618 LYARCGKVRDAYFAFDKI-FSKDNISWNSLISGFAQSGHCE 657
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 138/459 (30%), Positives = 239/459 (52%), Gaps = 42/459 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VS+N LISG + G + A++++ M D L +T +++L SS + +G+Q
Sbjct: 336 DEVSYNSLISGLSQQGYSDKALELFKKMCLDCL-KPDCVTVASLLSACSSVGALLVGKQF 394
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H + +K G S + + L+D+Y K I A F +N+V++N M+
Sbjct: 395 HSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAY------ 448
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
GL+ N E+ +F +M++EG+ +QFT+ S+L C
Sbjct: 449 -----------------------GLLDN--LNESFKIFTQMQMEGIEPNQFTYPSILRTC 483
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L A++ G+QIH +++ + NV+V S L+DMY K + +A +FR + K+VVSWT
Sbjct: 484 SSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWT 543
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
AM+ GY Q+ EA+ +F MQ GI D+ S IS+CA + +L +G Q H ++ V+
Sbjct: 544 AMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVS 603
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G ++V NALV+ Y +CG + D++ F+++ +D +SW +L+SG+A+ G E + LF
Sbjct: 604 GYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLF 663
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT----CMID 420
+M G + + T +SA + V+ G+ +++K HD T +I
Sbjct: 664 SQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTG-----HDSETEVSNVLIT 718
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+ ++ G +++A+ +MP + I W +L+ HG+
Sbjct: 719 LYAKCGNIDDAERQFFEMP-EKNEISWNAMLTGYSQHGH 756
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 137/484 (28%), Positives = 226/484 (46%), Gaps = 66/484 (13%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G ++HG ILK GF + V + L+D+Y G + A FDE+P + +
Sbjct: 87 GWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLS----------- 135
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
W ++ + + + LFR M E + D+ T+ V
Sbjct: 136 --------------------CWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGV 175
Query: 181 LTACGG-LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
L CGG + ++IHA I + +++++FV + L+D+Y K + A+ VF + ++
Sbjct: 176 LRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRD 235
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VSW AML G Q+GC EEAV +FC M +G+ P + SV+S+C + + G Q HG
Sbjct: 236 SVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHG 295
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
L G V NALVT Y + GN + ++FN M RDEVS+ +L+SG ++ G +++
Sbjct: 296 LVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDK 355
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY-------------------FE 400
++LF+KM LKPD VT+ +LSACS G + G+ + +
Sbjct: 356 ALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLD 415
Query: 401 IMVKEYGIRPIHDHY-----------TCMIDILSRAGRLEEAKSFINKMP---FPPDAIG 446
+ VK I+ H+ + M+ L E+ +M P+
Sbjct: 416 LYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFT 475
Query: 447 WATLLSSCRIHGNVEIGKWAAESLLELD-PYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
+ ++L +C V++G+ +L+ +N +L +YA GK DH ++ R ++
Sbjct: 476 YPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLK 535
Query: 506 EKGV 509
EK V
Sbjct: 536 EKDV 539
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 201/401 (50%), Gaps = 36/401 (8%)
Query: 57 CVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMIT 116
CV+ +IH + G+ + +FV +PL+D+Y
Sbjct: 188 CVE---KIHARTITHGYENSLFVCNPLIDLY----------------------------- 215
Query: 117 GLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
+ G + ++++F G++ +DS+SW M++GL Q+G E EA+ LF +M G+ +
Sbjct: 216 --FKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYI 273
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
F SVL+AC + + G+Q+H +++ +V +ALV +Y + + AE VF M
Sbjct: 274 FSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAML 333
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
++ VS+ +++ G Q G S++A+++F M + ++PD T+ S++S+C+++ +L G Q
Sbjct: 334 QRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQ 393
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
FH ++ G+ S I + AL+ Y KC +I+ +H F + V W ++ Y
Sbjct: 394 FHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDN 453
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
NE+ +F +M G++P++ T +L CS V+ G V + G + +
Sbjct: 454 LNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQ-IHTQVLKTGFQFNVYVSS 512
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIH 457
+ID+ ++ G+L+ A ++ D + W +++ H
Sbjct: 513 VLIDMYAKLGKLDHALKIFRRLK-EKDVVSWTAMIAGYAQH 552
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 135/307 (43%), Gaps = 7/307 (2%)
Query: 155 EREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSA 214
E I+ M G+ + T+ +L C +G ++H I++ V +
Sbjct: 49 EANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCER 108
Query: 215 LVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD 274
L+D+Y + A +VF M + + W +L + + + +F M + ++PD
Sbjct: 109 LMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPD 168
Query: 275 DFTLGSVISSCAN-LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLF 333
+ T V+ C + H R++ G + + V N L+ Y K G + + ++F
Sbjct: 169 ERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVF 228
Query: 334 NEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVE 393
+ + RD VSW A++SG ++ G E + LF +M + G+ P VLSAC++ +
Sbjct: 229 DGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYK 288
Query: 394 KGRHYFEIMVKEYGIRPIHDHYTC--MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
G +++K+ G + Y C ++ + SR G A+ N M D + + +L+
Sbjct: 289 VGEQLHGLVLKQ-GFSL--ETYVCNALVTLYSRLGNFIPAEQVFNAM-LQRDEVSYNSLI 344
Query: 452 SSCRIHG 458
S G
Sbjct: 345 SGLSQQG 351
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 102/192 (53%), Gaps = 8/192 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +SWN LISG A G +A+ +++ M K G ++ TF + +++ V LG+QI
Sbjct: 639 DNISWNSLISGFAQSGHCEEALSLFSQMSKAG-QEINSFTFGPAVSAAANVANVKLGKQI 697
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H I+K G S V + L+ +YAK G I DA+R F E+PEKN + +N M+TG + G
Sbjct: 698 HAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHG 757
Query: 125 EESRRLFRGMKD----KDSISWTTMITGLMQNGLEREAIDLFREMR-LEGLAMDQFTFGS 179
++ LF MK + +++ +++ GL E I F+ MR + GL +
Sbjct: 758 FKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYAC 817
Query: 180 VLTACG--GLLA 189
V+ G GLL+
Sbjct: 818 VVDLLGRSGLLS 829
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 90/215 (41%), Gaps = 13/215 (6%)
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
TA+ Y + + M+ G+ + T ++ C + +G + HG+ L
Sbjct: 37 TALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILK 96
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
G + + + L+ Y G+++ + +F+EM VR W ++ + A + L
Sbjct: 97 MGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGL 156
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH----YTC-- 417
F +ML +KPDE T GVL C G F + K + H + + C
Sbjct: 157 FRRMLQEKVKPDERTYAGVLRGCG------GGDVPFHCVEKIHARTITHGYENSLFVCNP 210
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ID+ + G L AK + + D++ W +LS
Sbjct: 211 LIDLYFKNGFLNSAKKVFDGLQ-KRDSVSWVAMLS 244
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 16/112 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNL-SRITFSTMLIMSSSRRCVD 59
MP + +SWN +++G++ HG A+ ++ M + LG L + +TF +L S VD
Sbjct: 736 MPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQ--LGVLPNHVTFVGVLSACSHVGLVD 793
Query: 60 LG-------RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
G R++HG + K + V VD+ + GL+ A+R +E+P
Sbjct: 794 EGIKYFQSMREVHGLVPKPEHYACV------VDLLGRSGLLSRARRFVEEMP 839
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 260/643 (40%), Positives = 391/643 (60%), Gaps = 32/643 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSWN +I+G H + A+ + + M G + T S+ L ++ +LGRQ+
Sbjct: 248 DVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGT-RPNMFTLSSALKACAAMGFKELGRQL 306
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H ++K S +F LVDMY+K ++ DA+R +D +P+
Sbjct: 307 HSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPK------------------- 347
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
KD I+W +I+G Q G +A+ LF +M E + +Q T +VL +
Sbjct: 348 ------------KDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSV 395
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L A++ KQIH I++ + +V ++L+D Y KC I A +F W+++V++T
Sbjct: 396 ASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYT 455
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
+M+ Y Q G EEA+K++ MQ I+PD F S++++CANL++ E+G Q H ++
Sbjct: 456 SMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKF 515
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G + I SN+LV Y KCG+IED+ R F+E+ R VSW+A++ GYA+ G E + LF
Sbjct: 516 GFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLF 575
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+ML G+ P+ +TL+ VL AC+ AGLV +G+ YFE M +GI+P +HY CMID+L R
Sbjct: 576 NQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGR 635
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
+G+L EA +N +PF D W LL + RIH N+E+G+ AA+ L +L+P ++VLL
Sbjct: 636 SGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLL 695
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
++IYAS G W++V+++R+ M++ V+K+PG SWI+ K +V+ F D S SD+IYA+L
Sbjct: 696 ANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKL 755
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
++L + K GY + +H+V+ SEK K+L HHSEKLA+AFGL+ PPG PIRV KNL
Sbjct: 756 DQLGDLLSKAGYSSIVEIDIHNVDKSEKEKLLYHHSEKLAVAFGLIATPPGGPIRVKKNL 815
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R+C DCH K++ KI REI+VRD RFH FK+G CSCGD+W
Sbjct: 816 RICVDCHTFFKFVCKIVSREIIVRDINRFHHFKDGSCSCGDYW 858
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 132/457 (28%), Positives = 237/457 (51%), Gaps = 34/457 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW+ L+SG+ +G V +A+ V+N M G+ + TF ++L S +R +++GR++
Sbjct: 46 DVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGV-KCNEFTFPSVLKACSMKRDLNMGRKV 104
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG + GF S FV + LV MYAK GL+
Sbjct: 105 HGMAVVTGFESDGFVANTLVVMYAKCGLL------------------------------- 133
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
++SRRLF G+ +++ +SW + + +Q+ L EA+ LF+EM G+ ++F+ +L AC
Sbjct: 134 DDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNAC 193
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
GL + G++IH +++ + F +ALVDMY K I+ A +VF+ +A +VVSW
Sbjct: 194 AGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWN 253
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
A++ G + C++ A+ + M+ +G P+ FTL S + +CA + E G Q H +
Sbjct: 254 AIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKM 313
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
S + + LV Y KC ++D+ R ++ M +D ++W AL+SGY++ G + + LF
Sbjct: 314 DAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLF 373
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
KM S + ++ TL VL + + ++ + I +K GI ++D +
Sbjct: 374 SKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKS-GIYSDFYVINSLLDTYGK 432
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
++EA + + D + + +++++ +G+ E
Sbjct: 433 CNHIDEASKIFEERTW-EDLVAYTSMITAYSQYGDGE 468
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 225/453 (49%), Gaps = 34/453 (7%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSWN L S + +AV ++ M++ G+ + + S +L + + DLGR+IHG
Sbjct: 149 VSWNALFSCYVQSELCGEAVGLFKEMVRSGIMP-NEFSISIILNACAGLQEGDLGRKIHG 207
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+LK G F + LVDMY+K G I E
Sbjct: 208 LMLKMGLDLDQFSANALVDMYSKAGEI-------------------------------EG 236
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+ +F+ + D +SW +I G + + A+ L EM+ G + FT S L AC
Sbjct: 237 AVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAA 296
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+ E G+Q+H+ +I+ D ++F LVDMY KC+ + A + +M K++++W A+
Sbjct: 297 MGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNAL 356
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ GY Q G +AV +F M I+ + TL +V+ S A+L +++ Q H S+ +G+
Sbjct: 357 ISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGI 416
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
S V N+L+ YGKC +I+++ ++F E D V++T++++ Y+++G E + L+ +
Sbjct: 417 YSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQ 476
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M +KPD +L+AC+ E+G+ + ++G ++++ ++ G
Sbjct: 477 MQDADIKPDPFICSSLLNACANLSAYEQGKQ-LHVHAIKFGFMCDIFASNSLVNMYAKCG 535
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+E+A +++P + W+ ++ HG+
Sbjct: 536 SIEDADRAFSEIP-NRGIVSWSAMIGGYAQHGH 567
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 198/392 (50%), Gaps = 37/392 (9%)
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
++H H++KFGF + + LV +Y+K R F G R+
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKC-------RRF----------------GYARK- 37
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
LV+ES L D +SW+++++G +QNG EA+ +F EM L G+ ++FTF SVL
Sbjct: 38 LVDESSEL-------DVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLK 90
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
AC L G+++H + + + FV + LV MY KC + + +F + +NVVS
Sbjct: 91 ACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVS 150
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL 302
W A+ Y Q+ EAV +F M R+GI P++F++ ++++CA L + G + HG L
Sbjct: 151 WNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLML 210
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
GL +NALV Y K G IE + +F ++ D VSW A+++G + +
Sbjct: 211 KMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALM 270
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC--MID 420
L ++M G +P+ TL L AC+ G E GR ++K + D + ++D
Sbjct: 271 LLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIK---MDAHSDLFAAVGLVD 327
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ S+ +++A+ + MP D I W L+S
Sbjct: 328 MYSKCEMMDDARRAYDSMP-KKDIIAWNALIS 358
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 192/378 (50%), Gaps = 36/378 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D ++WN LISG++ G DAV +++ M + + + ++ T ST+L +S + + +
Sbjct: 345 MPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDI-DFNQTTLSTVLKSVASLQAIKV 403
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+QIH +K G S +V + L+D Y K I +A + F+E +++V Y +MIT +
Sbjct: 404 CKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQ 463
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G EE+ +L+ M+D D + D F S+
Sbjct: 464 YGDGEEALKLYLQMQDAD-------------------------------IKPDPFICSSL 492
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L A E+GKQ+H I+ ++F ++LV+MY KC SI+ A+ F + + +
Sbjct: 493 LNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGI 552
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
VSW+AM+ GY Q+G +EA+++F M R+G+ P+ TL SV+ +C + + EG Q F
Sbjct: 553 VSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEK 612
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKAN 358
++ G+ ++ G+ G + ++ L N + D W AL+ G A+ K
Sbjct: 613 MEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALL-GAARIHKNI 671
Query: 359 ETIDLFEKMLSHGLKPDE 376
E KML L+P++
Sbjct: 672 ELGQKAAKML-FDLEPEK 688
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 257/641 (40%), Positives = 387/641 (60%), Gaps = 60/641 (9%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V W +++G++ +G + A++ + M +G+ ++ TF ++L S G Q+HG
Sbjct: 206 VLWTAMVTGYSQNGDGHKAIECFRDMRGEGI-ECNQFTFPSILTACGSISACGFGAQVHG 264
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
I++ GFG+ VFVGS LVDMY+K G + +A
Sbjct: 265 CIVRSGFGANVFVGSALVDMYSKCGDLSNA------------------------------ 294
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
RR+ M+ D +SW +MI G ++ GL EA+ LFR M L + +D+FT+ SVL
Sbjct: 295 -RRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSF 353
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
++ + +H+ I++ + V +ALVDMY K YA VF M K+V+SWT++
Sbjct: 354 VMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSL 413
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ G NG EEA+++FC M+ GI PD + +V+S+CA L LE G Q H L +GL
Sbjct: 414 VTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGL 473
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
S ++V N+LV+ Y KCG IED++++F+ M ++D ++WTAL+ GYA+ G+ +
Sbjct: 474 GSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRD------- 526
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
AGLVE GR YF+ M + YGI+P +HY CMID+L R+G
Sbjct: 527 ---------------------HAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSG 565
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+L EAK +N+M PDA W LL++CR+HGNVE+G+ AA +L EL+P N YVLLS+
Sbjct: 566 KLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSN 625
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
+Y++ GKW+ ++ RR M+ +GV K+PGCSWI+ S+VH F ++D S P + +IY+++++
Sbjct: 626 LYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDE 685
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
+ + + GYVPDM+ LHD++ K L +HSEKLA+AFGLL +PPG PIR+ KNLR+
Sbjct: 686 IMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRI 745
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCH A KY+S + R +++RD+ FH F+ G CSC D+W
Sbjct: 746 CGDCHTAMKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 786
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 161/513 (31%), Positives = 257/513 (50%), Gaps = 44/513 (8%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P ++W+ LISG+ +G +A++++ M +G ++ T+ ++L + S ++ G
Sbjct: 99 PIRSCITWSSLISGYCRYGCDVEALELFWEMQYEG-ERPNQFTWGSVLRVCSMYVLLEKG 157
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+QIH H +K F S FV + LVDMYAK I +A+ F+ P+K
Sbjct: 158 KQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDK--------------- 202
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
++ + WT M+TG QNG +AI+ FR+MR EG+ +QFTF S+L
Sbjct: 203 ---------------RNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSIL 247
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
TACG + A G Q+H I+R+ NVFVGSALVDMY KC + A + TM + V
Sbjct: 248 TACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPV 307
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW +M+VG + G EEA+ +F M ++ D+FT SV++ + + + H
Sbjct: 308 SWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLI 367
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ TG ++ V+NALV Y K G + + +F +M +D +SWT+LV+G G E +
Sbjct: 368 VKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEAL 427
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
LF +M G+ PD++ + VLSAC+ ++E G+ +K G+ ++ +
Sbjct: 428 RLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKS-GLGSSLSVDNSLVSM 486
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLL------SSCRIH-GNVEIGKWAAESLLE-- 472
++ G +E+A + M D I W L+ R H G VE G+ +S+ E
Sbjct: 487 YAKCGCIEDANKVFDSMEI-QDVITWTALIVGYAQNGRGRDHAGLVEHGRSYFQSMEEVY 545
Query: 473 -LDPYNPASYVLLSSIYASKGKWDHVSQLRRTM 504
+ P P Y + + GK +L M
Sbjct: 546 GIKP-GPEHYACMIDLLGRSGKLMEAKELLNQM 577
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 131/375 (34%), Positives = 207/375 (55%), Gaps = 3/375 (0%)
Query: 88 AKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMIT 147
+K G + DA++ FD +P+++ +NTMI G + E+R+LF + I+W+++I+
Sbjct: 52 SKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLIS 111
Query: 148 GLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKD 207
G + G + EA++LF EM+ EG +QFT+GSVL C + LE+GKQIHA I+
Sbjct: 112 GYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDS 171
Query: 208 NVFVGSALVDMYCKCKSIKYAESVFRTMAWK-NVVSWTAMLVGYGQNGCSEEAVKIFCNM 266
N FV + LVDMY KCK I AE +F K N V WTAM+ GY QNG +A++ F +M
Sbjct: 172 NAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDM 231
Query: 267 QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
+ GIE + FT S++++C ++++ G Q HG + +G + + V +ALV Y KCG++
Sbjct: 232 RGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDL 291
Query: 327 EDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSAC 386
++ R+ M V D VSW +++ G + G E + LF M +K DE T VL+
Sbjct: 292 SNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCF 351
Query: 387 SRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIG 446
S + ++VK G ++D+ ++ G + A KM D I
Sbjct: 352 SFVMDMRNAMSVHSLIVKT-GFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMT-DKDVIS 409
Query: 447 WATLLSSCRIHGNVE 461
W +L++ C +G+ E
Sbjct: 410 WTSLVTGCVHNGSYE 424
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 100/196 (51%), Gaps = 16/196 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +SW L++G +GS +A++++ M G+ + +I + +L + ++
Sbjct: 402 MTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGI-HPDQIVIAAVLSACAELTVLEF 460
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H + LK G GS + V + LV MYAK G I DA + FD + ++++ + +I G +
Sbjct: 461 GKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQ 520
Query: 121 R-------GLVEESRRLFRGMKDKDSIS-----WTTMITGLMQNGLEREAIDLFREMRLE 168
GLVE R F+ M++ I + MI L ++G EA +L +M ++
Sbjct: 521 NGRGRDHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQ 580
Query: 169 GLAMDQFTFGSVLTAC 184
D + ++L AC
Sbjct: 581 P---DATVWKALLAAC 593
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 42/199 (21%)
Query: 298 HGRSLVT--GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE-------------- 341
H R V G + + SN +++ KCG ++D+ +LF+ M RDE
Sbjct: 27 HIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSG 86
Query: 342 -----------------VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
++W++L+SGY ++G E ++LF +M G +P++ T VL
Sbjct: 87 RLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLR 146
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDH----YTCMIDILSRAGRLEEAKSFINKMPF 440
CS L+EKG+ + + I+ D T ++D+ ++ + EA+ P
Sbjct: 147 VCSMYVLLEKGKQ-----IHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPD 201
Query: 441 PPDAIGWATLLSSCRIHGN 459
+ + W +++ +G+
Sbjct: 202 KRNHVLWTAMVTGYSQNGD 220
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 271/643 (42%), Positives = 389/643 (60%), Gaps = 33/643 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +SWN +I G A +G ++A ++ M ++G S T+ ++L S + +++
Sbjct: 299 DVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDS-TTYLSLLNTHVSTGAWEWVKEV 357
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H H ++ G S + VGS V MY + G I DA+ FD+L +N+
Sbjct: 358 HKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVT--------------- 402
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+W MI G+ Q REA+ LF +MR EG D TF ++L+A
Sbjct: 403 ----------------TWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSAN 446
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G ALE K++H++ I D + VG+ALV MY KC + YA+ VF M +NV +WT
Sbjct: 447 VGEEALEWVKEVHSYAIDAGLVD-LRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWT 505
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
M+ G Q+GC EA +F M R GI PD T S++S+CA+ +LE + H ++
Sbjct: 506 VMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNA 565
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
GL+S + V NALV Y KCG+++D+ R+F++M RD SWT ++ G A+ G+ + +DLF
Sbjct: 566 GLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLF 625
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
KM G KP+ + + VLSACS AGLV++GR F + ++YGI P +HYTCM+D+L R
Sbjct: 626 VKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGR 685
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG+LEEAK FI MP P W LL +C +GN+E+ ++AA+ L+L P + ++YVLL
Sbjct: 686 AGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLL 745
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S+IYA+ G W+ +R M+ +G+RK+PG SWI+ +++H F D S P S +IYA+L
Sbjct: 746 SNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEIYAKL 805
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
+ L +++ EGYVPD VL + + K + L HSEKLAI +GL+ P PIRV KNL
Sbjct: 806 KDLIKRLKAEGYVPDTRLVLRNTDQEYKEQALCSHSEKLAIVYGLMHTPYRNPIRVYKNL 865
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RVCSDCH ATK+ISK+T REI+ RDA RFH FK+G CSCGD+W
Sbjct: 866 RVCSDCHTATKFISKVTGREIVARDAKRFHHFKDGVCSCGDYW 908
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 138/430 (32%), Positives = 220/430 (51%), Gaps = 35/430 (8%)
Query: 12 LISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKF 71
+I G+A +G DA+KVY+ M ++G G + IT+ ++L S + G++IH HI++
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREG-GQPNEITYLSILKACCSPVSLKWGKKIHAHIIQS 59
Query: 72 GFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLF 131
GF S V V + LV+MY K G I DA+ FD++ E+N+
Sbjct: 60 GFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNV----------------------- 96
Query: 132 RGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALE 191
ISWT MI GL G +EA F +M+ EG + +T+ S+L A ALE
Sbjct: 97 --------ISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALE 148
Query: 192 EGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYG 251
K++H+ + ++ VG+ALV MY K SI A VF M +++ SWT M+ G
Sbjct: 149 WVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLA 208
Query: 252 QNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCA--NLASLEEGTQFHGRSLVTGLISF 309
Q+G +EA +F M+R G P+ T S++++ A + +LE + H + G IS
Sbjct: 209 QHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISD 268
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
+ V NAL+ Y KCG+I+D+ +F+ M RD +SW A++ G A+ G +E +F KM
Sbjct: 269 LRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQ 328
Query: 370 HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLE 429
G PD T + +L+ G E + + V E G+ + + + R G ++
Sbjct: 329 EGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAV-EVGLVSDLRVGSAFVHMYIRCGSID 387
Query: 430 EAKSFINKMP 439
+A+ +K+
Sbjct: 388 DAQLIFDKLA 397
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 150/501 (29%), Positives = 240/501 (47%), Gaps = 80/501 (15%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDG-LGNLSRITFSTMLIMS--SSRRCVDLG 61
D SW ++I G A HG +A ++ M + G L NL+ T+ ++L S +S ++
Sbjct: 196 DIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLT--TYLSILNASAITSTGALEWV 253
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+++H H K GF S + VG+ L+ MYAK G I DA+ FD + +++++ +N MI G
Sbjct: 254 KEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGG---- 309
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
L QNG EA +F +M+ EG D T+ S+L
Sbjct: 310 ---------------------------LAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLL 342
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
A E K++H + ++ VGSA V MY +C SI A+ +F +A +NV
Sbjct: 343 NTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVT 402
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
+W AM+ G Q C EA+ +F M+R G PD T +++S+ +LE + H +
Sbjct: 403 TWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYA 462
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ GL+ + V NALV Y KCGN + ++F++M R+ +WT ++SG A+ G +E
Sbjct: 463 IDAGLVD-LRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAF 521
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSAC----------------------------------- 386
LF +ML G+ PD T + +LSAC
Sbjct: 522 SLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMY 581
Query: 387 SRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP---FPPD 443
++ G V+ R F+ M++ R ++ +T MI L++ GR +A KM F P+
Sbjct: 582 AKCGSVDDARRVFDDMLE----RDVYS-WTVMIGGLAQHGRGLDALDLFVKMKLEGFKPN 636
Query: 444 AIGWATLLSSCRIHGNVEIGK 464
+ +LS+C G V+ G+
Sbjct: 637 GYSFVAVLSACSHAGLVDEGR 657
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 150/501 (29%), Positives = 235/501 (46%), Gaps = 79/501 (15%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
+SW ++I G A +G +A + M ++G S T+ ++L ++S ++ +++H
Sbjct: 97 ISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNS-YTYVSILNANASAGALEWVKEVHS 155
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
H + G + VG+ LV MYAK G I DA
Sbjct: 156 HAVNAGLALDLRVGNALVHMYAKSGSIDDA------------------------------ 185
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG- 185
R +F GM ++D SWT MI GL Q+G +EA LF +M G + T+ S+L A
Sbjct: 186 -RVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAI 244
Query: 186 -GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
ALE K++H + ++ VG+AL+ MY KC SI A VF M ++V+SW
Sbjct: 245 TSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWN 304
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
AM+ G QNGC EA IF MQ+ G PD T S++++ + + E + H ++
Sbjct: 305 AMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEV 364
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
GL+S + V +A V Y +CG+I+D+ +F+++ VR+ +W A++ G A+ E + LF
Sbjct: 365 GLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLF 424
Query: 365 EKMLSHGLKPDEVTLIGVLSA----------------CSRAGLVE--------------- 393
+M G PD T + +LSA AGLV+
Sbjct: 425 LQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLRVGNALVHMYAKCG 484
Query: 394 ---KGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM---PFPPDAIGW 447
+ F+ MV+ R + +T MI L++ G EA S +M PDA +
Sbjct: 485 NTMYAKQVFDDMVE----RNV-TTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTY 539
Query: 448 ATLLSSCRIHGNVEIGKWAAE 468
++LS+C G +E W E
Sbjct: 540 VSILSACASTGALE---WVKE 557
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 194/386 (50%), Gaps = 35/386 (9%)
Query: 145 MITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRND 204
MI G + G +A+ ++ +MR EG ++ T+ S+L AC ++L+ GK+IHA II++
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 205 HKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFC 264
+ +V V +ALV+MY KC SI A+ +F M +NV+SWT M+ G G +EA F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 265 NMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCG 324
MQR G P+ +T S++++ A+ +LE + H ++ GL + V NALV Y K G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180
Query: 325 NIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVL- 383
+I+D+ +F+ M RD SWT ++ G A+ G+ E LF +M G P+ T + +L
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240
Query: 384 -SACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY------------TCMIDILSRAGRLEE 430
SA + G +E ++ +H H +I + ++ G +++
Sbjct: 241 ASAITSTGALE-------------WVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDD 287
Query: 431 AKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY----NPASYVLLSS 486
A+ + M D I W ++ +G G A L++ + +Y+ L +
Sbjct: 288 ARLVFDGMC-DRDVISWNAMIGGLAQNG---CGHEAFTIFLKMQQEGFVPDSTTYLSLLN 343
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKD 512
+ S G W+ V ++ + E G+ D
Sbjct: 344 THVSTGAWEWVKEVHKHAVEVGLVSD 369
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 261/641 (40%), Positives = 392/641 (61%), Gaps = 33/641 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW +I+G A HG + +A +N M++ G+ +R+TF ++L S + GRQIH
Sbjct: 373 VSWTAMIAGFAQHGRMEEAFLFFNKMIESGI-EPNRVTFMSILGACSRPSALKQGRQIHD 431
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
I+K G+ + V + L+ MYAK G + DA+ F+ + ++N+V
Sbjct: 432 RIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVV----------------- 474
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+W MIT +Q+ A+ F+ + EG+ D TF S+L C
Sbjct: 475 --------------AWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKS 520
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
ALE GK + + IIR + ++ + +ALV M+ C + A ++F M +++VSW +
Sbjct: 521 PDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTI 580
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ G+ Q+G ++ A F MQ +G++PD T ++++CA+ +L EG + H L
Sbjct: 581 IAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAAL 640
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ V L++ Y KCG+I+D+H +F+ + ++ SWT++++GYA+ G+ E ++LF +
Sbjct: 641 DCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQ 700
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M G+KPD +T +G LSAC+ AGL+++G H+FE M K++ I P +HY CM+D+ RAG
Sbjct: 701 MQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESM-KDFNIEPRMEHYGCMVDLFGRAG 759
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
L EA FINKM PD+ W LL +C++H +VE+ + A+ LELDP + YV+LS+
Sbjct: 760 LLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSN 819
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IYA+ G W V+++R+ M ++GV K PG SWI+ RVHIF +DD + P ++I+AEL +
Sbjct: 820 IYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGR 879
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
L+ +M K GYVPD VLHDVE SEK L HHSE+LAIA+GLL PP PI + KNLRV
Sbjct: 880 LHMEMKKLGYVPDTRYVLHDVEDSEKEHALCHHSERLAIAYGLLKTPPLTPIVISKNLRV 939
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCH ATK ISKIT+R+I+ RD+ RFH FK+G CSCGDFW
Sbjct: 940 CGDCHTATKLISKITKRQIIARDSNRFHHFKDGVCSCGDFW 980
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 143/458 (31%), Positives = 242/458 (52%), Gaps = 34/458 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SWNLL+ G+ H +A +++ M++DG+ + TF ML + + VD
Sbjct: 165 MPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGV-KPDKYTFVYMLNACADAKNVDK 223
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G ++ IL G+ + +FVG+ L++M+ K G + DA + F+ LP +
Sbjct: 224 GGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRR-------------- 269
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
D I+WT+MITGL ++ ++A +LF+ M EG+ D+ F S+
Sbjct: 270 -----------------DLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSL 312
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC ALE+GK++HA + ++VG+AL+ MY KC S++ A VF + +NV
Sbjct: 313 LKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNV 372
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWTAM+ G+ Q+G EEA F M +GIEP+ T S++ +C+ ++L++G Q H R
Sbjct: 373 VSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDR 432
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ G I+ V AL++ Y KCG++ D+ +F ++ ++ V+W A+++ Y + K +
Sbjct: 433 IIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNA 492
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ F+ +L G+KPD T +L+ C +E G+ + + ++ G ++
Sbjct: 493 VATFQALLKEGIKPDSSTFTSILNVCKSPDALELGK-WVQSLIIRAGFESDLHIRNALVS 551
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ G L A + N MP D + W T+++ HG
Sbjct: 552 MFVNCGDLMSAMNLFNDMP-ERDLVSWNTIIAGFVQHG 588
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 132/473 (27%), Positives = 239/473 (50%), Gaps = 37/473 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D ++W +I+G A H A ++ +M ++G+ ++ F ++L + ++
Sbjct: 266 LPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGV-QPDKVAFVSLLKACNHPEALEQ 324
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+++H + + G + ++VG+ L+ MY K G + DA F+ + +N+V
Sbjct: 325 GKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVV----------- 373
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SWT MI G Q+G EA F +M G+ ++ TF S+
Sbjct: 374 --------------------SWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSI 413
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC AL++G+QIH II+ + + V +AL+ MY KC S+ A +VF ++ +NV
Sbjct: 414 LGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNV 473
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+W AM+ Y Q+ + AV F + + GI+PD T S+++ C + +LE G
Sbjct: 474 VAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSL 533
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ G S + + NALV+ + CG++ + LFN+M RD VSW +++G+ + G+
Sbjct: 534 IIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFA 593
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
D F+ M G+KPD++T G+L+AC+ + +GR ++ E + T +I
Sbjct: 594 FDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRR-LHALITEAALDCDVVVGTGLIS 652
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL 473
+ ++ G +++A + +P + W ++++ HG GK A E ++
Sbjct: 653 MYTKCGSIDDAHLVFHNLP-KKNVYSWTSMITGYAQHGR---GKEALELFCQM 701
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 124/492 (25%), Positives = 248/492 (50%), Gaps = 25/492 (5%)
Query: 14 SGHASHGSVNDAVKVYNLMLKDG----LGNLSRITFSTMLIMSSSRRCVDLGRQIHGHIL 69
SG S G N+ V + N + L +++ + ++++S + + RQ + +L
Sbjct: 52 SGSYSKGQGNEFVDIKNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLL 111
Query: 70 KFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRR 129
+ + + K I + +I M+N +I+ + G +++
Sbjct: 112 QLCIKHKNLGDGERIHNHIKFSKI-----------QPDIFMWNMLISMYAKCGNTNSAKQ 160
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
+F M DKD SW ++ G +Q+ EA L +M +G+ D++TF +L AC
Sbjct: 161 IFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKN 220
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
+++G ++ + I+ ++FVG+AL++M+ KC + A VF + +++++WT+M+ G
Sbjct: 221 VDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITG 280
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
++ ++A +F M+ G++PD S++ +C + +LE+G + H R GL +
Sbjct: 281 LARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTE 340
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
I V AL++ Y KCG++ED+ +FN + R+ VSWTA+++G+A+ G+ E F KM+
Sbjct: 341 IYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIE 400
Query: 370 HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLE 429
G++P+ VT + +L ACSR +++GR + ++K G T ++ + ++ G L
Sbjct: 401 SGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKA-GYITDDRVRTALLSMYAKCGSLM 459
Query: 430 EAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYA 489
+A++ ++ + + W ++++ H + ++LL+ + P S S +
Sbjct: 460 DARNVFERIS-KQNVVAWNAMITAYVQHEKYDNAVATFQALLK-EGIKPDSSTFTSILNV 517
Query: 490 SK-------GKW 494
K GKW
Sbjct: 518 CKSPDALELGKW 529
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 122/285 (42%), Gaps = 66/285 (23%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN +I+G HG A + +M + G+ +ITF+ +L +S +
Sbjct: 569 MPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGV-KPDQITFTGLLNACASPEALTE 627
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR++H I + V VG+ L+ MY K G I DA F LP+KN+ + +MITG +
Sbjct: 628 GRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQ 687
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G RG +EA++LF +M+ EG+ D TF
Sbjct: 688 HG---------RG----------------------KEALELFCQMQQEGVKPDWITFVGA 716
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+AC ++EG +H F ++ D + + Y
Sbjct: 717 LSACAHAGLIKEG--LHHF-------------ESMKDFNIEPRMEHYG------------ 749
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
M+ +G+ G EAV+ MQ ++PD G+++ +C
Sbjct: 750 ----CMVDLFGRAGLLHEAVEFINKMQ---VKPDSRLWGALLGAC 787
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 264/647 (40%), Positives = 402/647 (62%), Gaps = 17/647 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN ++SG+A +G V +A +++ D + + I+++ ML ++
Sbjct: 56 MPERDVVSWNAMLSGYAQNGYVKEAKEIF-----DEMPCKNSISWNGMLAAYVQNGRIED 110
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
R++ + S+ + ++ Y K + DA+ FD +PE++ V +NTMI+G +
Sbjct: 111 ARRLFESKADWELISW----NCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQ 166
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G + E++RLF +D +WT M++G +QNG+ EA +F M + + ++ ++
Sbjct: 167 NGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEK----NSVSWNAI 222
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ +++ +++ + NV + ++ Y + I A + F M ++
Sbjct: 223 IAGYVQCKRMDQARELFEAM----PCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDS 278
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SW A++ GY Q+G EEA+ +F M+R+G + T S +S+CA +A+LE G Q HGR
Sbjct: 279 ISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGR 338
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ GL S V NAL+ Y KCGNI+D++ +F + ++ VSW +++GYA+ G E
Sbjct: 339 VVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEA 398
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LFE M G+ PD+VT++GVLSACS GLV+KG YF M ++YGI HYTCMID
Sbjct: 399 LMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMID 458
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAGRL++A++ + MPF PDA W LL + RIHGN E+G+ AA+ + E++P N
Sbjct: 459 LLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGM 518
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS++YA+ G+W V ++R MR++GV+K PG SW++ ++++H F+ D P D+I
Sbjct: 519 YVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRI 578
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y LE+L+ KM KEGYV VLHDVE EK+ ML +HSEKLA+AFG+L IP G PIRV
Sbjct: 579 YTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRV 638
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+KNLRVC DCHNA K+ISKI R I++RD+ RFH F G+CSCGD+W
Sbjct: 639 IKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 685
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 166/359 (46%), Gaps = 18/359 (5%)
Query: 100 FDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAI 159
FD++PE+++V +N M++G + G V+E++ +F M K+SISW M+ +QNG +A
Sbjct: 53 FDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDAR 112
Query: 160 DLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMY 219
LF + + S GG + R +D V + ++ Y
Sbjct: 113 RLFE-------SKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEV-SWNTMISGY 164
Query: 220 CKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLG 279
+ + A+ +F ++V +WTAM+ GY QNG +EA ++F M E + +
Sbjct: 165 AQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMP----EKNSVSWN 220
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
++I+ +++ + + S+ N ++T Y + G+I + F+ M R
Sbjct: 221 AIIAGYVQCKRMDQARELFEAMPCQNVSSW----NTMITGYAQNGDIAQARNFFDRMPQR 276
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
D +SW A+++GYA+ G E + LF +M G + + T LS C+ +E G+
Sbjct: 277 DSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVH 336
Query: 400 EIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+VK G+ ++ + + G +++A + + + W T+++ HG
Sbjct: 337 GRVVKA-GLESGCYVGNALLVMYCKCGNIDDAYIVFEGIE-EKEVVSWNTMIAGYARHG 393
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 269/648 (41%), Positives = 402/648 (62%), Gaps = 36/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSWN L++G +G +A+++++ + + L++ T++T++ + ++ + + L
Sbjct: 266 METRDMVSWNTLMAGLVLNGHDLEALQLFHDS-RSSITMLTQSTYATVIKLCANIKQLGL 324
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
RQ+H +LK GF SY V + L+D Y+K G + +A F LL
Sbjct: 325 ARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIF-----------------LLM 367
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G ++ +SWT MI G +QNG A LF MR +G+A + FT+ ++
Sbjct: 368 SG-------------SQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTI 414
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LTA L QIHA +I+ +++ VG+AL+ Y K + + A S+F+ + K+V
Sbjct: 415 LTASVASLP----PQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDV 470
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN-LASLEEGTQFHG 299
VSW+AML Y Q G S+ A IF M +G++P++FT+ SVI +CA+ A ++ G QFH
Sbjct: 471 VSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHA 530
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
S+ + VS+ALV+ Y + G+IE + +F RD VSW +++SGYA+ G + +
Sbjct: 531 ISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQK 590
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+D+F +M + G++ D VT + V+ C+ AGLVE+G+ YF+ M ++YGI P +HY CM+
Sbjct: 591 ALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMV 650
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+ SRAG+L+EA S I M FP + W TLL +C++H NVE+GK AAE LL L+P++ A
Sbjct: 651 DLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSA 710
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+YVLLS+IY++ GKW ++R+ M K V+K+ GCSWI+ K++VH F A D S P S+Q
Sbjct: 711 TYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQ 770
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IYA+L + K+ +EGY PD S LH+V +K ML HSE+LA+AFGL+ PPG P+
Sbjct: 771 IYAKLRAMTTKLKQEGYCPDTSFALHEVAEEQKEAMLAMHSERLALAFGLIATPPGAPLH 830
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ KNLRVC DCH K +SKI REI++RD RFH F +G CSCGDFW
Sbjct: 831 IFKNLRVCGDCHTVIKMVSKIEDREIVMRDCSRFHHFNSGVCSCGDFW 878
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 139/463 (30%), Positives = 244/463 (52%), Gaps = 46/463 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+W L++G+ G+++D ++++ M +G+ S +TF+++L + +S+ VDL
Sbjct: 165 MPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNS-VTFASVLSVVASQGMVDL 223
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR++H +KFG S VFV + L++MYAK GL+ +A+ F + +++V +NT++ GL+
Sbjct: 224 GRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVL 283
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
NG + EA+ LF + R + Q T+ +V
Sbjct: 284 -------------------------------NGHDLEALQLFHDSRSSITMLTQSTYATV 312
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW-KN 239
+ C + L +Q+H+ +++ V +AL+D Y K + A +F M+ +N
Sbjct: 313 IKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQN 372
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VVSWTAM+ G QNG A +F M+ +G+ P+DFT ++++ A++ASL Q H
Sbjct: 373 VVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILT--ASVASLPP--QIHA 428
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ + T V AL+ Y K N E++ +F ++ +D VSW+A+++ YA+ G ++
Sbjct: 429 QVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDG 488
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSAC-SRAGLVEKGRHYFEIMVKEYGIRPIHDHY--- 415
++F KM HGLKP+E T+ V+ AC S V+ GR + I +K HD
Sbjct: 489 ATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHR----CHDALCVS 544
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ ++ + +R G +E A+ + D + W ++LS HG
Sbjct: 545 SALVSMYARKGSIESAQCIFERQT-DRDLVSWNSMLSGYAQHG 586
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 180/397 (45%), Gaps = 37/397 (9%)
Query: 96 AKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLE 155
A++ FDE+P +N L L + +RR G
Sbjct: 57 ARQAFDEIPHRNT----------LDHALFDHARR-----------------------GSV 83
Query: 156 REAIDLFREM-RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGS 213
+A+D F ++ R G + VL CG + GKQ+H IR H + +V VG+
Sbjct: 84 HQALDHFLDVHRCHGGRVGGGALVGVLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGT 143
Query: 214 ALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEP 273
+LVDMY K S+ VF M +NVV+WT++L GY Q+G + +++F M+ G+ P
Sbjct: 144 SLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWP 203
Query: 274 DDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLF 333
+ T SV+S A+ ++ G + H +S+ G S + V N+L+ Y KCG +E++ +F
Sbjct: 204 NSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVF 263
Query: 334 NEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVE 393
M RD VSW L++G G E + LF S + T V+ C+ +
Sbjct: 264 CGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLG 323
Query: 394 KGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
R ++K G + T ++D S+AG+L A M + + W +++
Sbjct: 324 LARQLHSSVLKR-GFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMING 382
Query: 454 CRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYAS 490
C +G+V + A S + D P + + + AS
Sbjct: 383 CIQNGDVPLAA-ALFSRMREDGVAPNDFTYSTILTAS 418
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 196/395 (49%), Gaps = 39/395 (9%)
Query: 60 LGRQIHGHILKFGFG-SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
LG+Q+HG ++ G V VG+ LVDMY K +++++ G
Sbjct: 121 LGKQLHGLCIRCGHDRGDVGVGTSLVDMYMK---------------------WHSVVDG- 158
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
R++F M ++ ++WT+++TG +Q+G + ++LF MR EG+ + TF
Sbjct: 159 ---------RKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFA 209
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
SVL+ ++ G+++HA ++ VFV ++L++MY KC ++ A VF M +
Sbjct: 210 SVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETR 269
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
++VSW ++ G NG EA+++F + + + T +VI CAN+ L Q H
Sbjct: 270 DMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLH 329
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN-VRDEVSWTALVSGYAKFGKA 357
L G S+ V AL+ Y K G + ++ +F M+ ++ VSWTA+++G + G
Sbjct: 330 SSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDV 389
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
LF +M G+ P++ T +L+A S A L + + +++ Y I T
Sbjct: 390 PLAAALFSRMREDGVAPNDFTYSTILTA-SVASL--PPQIHAQVIKTNYECTSIVG--TA 444
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
++ S+ EEA S I KM D + W+ +L+
Sbjct: 445 LLASYSKLCNTEEALS-IFKMIDQKDVVSWSAMLT 478
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 261/668 (39%), Positives = 403/668 (60%), Gaps = 25/668 (3%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLML-----KDGLGNLSRITFSTMLIMSSSRRCVD 59
D +SWN ++S H + A+ +++ M K I+ +L S + V
Sbjct: 230 DVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVP 289
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+++HG+ ++ G VFVG+ L+D YAK GL+ +A + F+ + K++V +N M+ G
Sbjct: 290 QTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYS 349
Query: 120 RRGLVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
+ G E + LF+ M+ + D ++WT +I G Q G EA++LFR+M G +
Sbjct: 350 QSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCV 409
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRN----------DHKDNVFVGSALVDMYCKCKSI 225
T SVL+AC L A +G +IHA+ ++N +++ V +AL+DMY KC+S
Sbjct: 410 TIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSF 469
Query: 226 KYAESVFRTMAW--KNVVSWTAMLVGYGQNGCSEEAVKIFCNM--QRNGIEPDDFTLGSV 281
K A S+F + +NVV+WT M+ G+ Q G S +A+K+F M + G+ P+ +T+ +
Sbjct: 470 KAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCI 529
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLI--SFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
+ +CA+LA++ G Q H L S V+N L+ Y KCG+++ + +F+ M+ +
Sbjct: 530 LMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQK 589
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
+SWT++++GY G+ +E +D+F+KM G PD++T + VL ACS G+V++G YF
Sbjct: 590 SAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYF 649
Query: 400 EIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+ M +YG+ P +HY C ID+L+R+GRL++A + MP P A+ W LLS+CR+H N
Sbjct: 650 DSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSN 709
Query: 460 VEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIK 519
VE+ + A L+E++ N SY L+S+IYA+ G+W V+++R M++ G++K PGCSW++
Sbjct: 710 VELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQ 769
Query: 520 YKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHH 579
+ F D S P S QIYA LE L ++ GYVP+ + LHDV+ EK +L H
Sbjct: 770 GQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEH 829
Query: 580 SEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNG 639
SEKLA+A+GLL PG PIR+ KNLRVC DCH+A YISKI EI+VRD RFH FKNG
Sbjct: 830 SEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNG 889
Query: 640 ECSCGDFW 647
CSCG +W
Sbjct: 890 SCSCGGYW 897
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 145/516 (28%), Positives = 241/516 (46%), Gaps = 100/516 (19%)
Query: 6 GVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIH 65
V WNLLI H G ++ A+ V ML+ G T +L G H
Sbjct: 127 AVWWNLLIREHIKQGRLDSAINVSCRMLRAGT-RPDHFTLPHVLKACGELPSYRCGSAFH 185
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
G I GF S VF+ + LV MY++ G + +A FDE+ ++ I
Sbjct: 186 GLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGI----------------- 228
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL------EGLAMDQFTFGS 179
D ISW ++++ +++ A+DLF +M L D + +
Sbjct: 229 -----------DDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 277
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L ACG L A+ + K++H IRN +VFVG+AL+D Y KC ++ A VF M +K+
Sbjct: 278 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 337
Query: 240 VVSWTAMLVGYGQN-----------------------------------GCSEEAVKIFC 264
VVSW AM+ GY Q+ GCS EA+ +F
Sbjct: 338 VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFR 397
Query: 265 NMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF----------ITVSN 314
M +G P+ T+ SV+S+CA+L + +GT+ H SL L++ + V N
Sbjct: 398 QMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYN 457
Query: 315 ALVTFYGKCGNIEDSHRLFNEMNV--RDEVSWTALVSGYAKFGKANETIDLFEKMLS--H 370
AL+ Y KC + + + +F+++ + R+ V+WT ++ G+A++G +N+ + LF +M+S +
Sbjct: 458 ALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPY 517
Query: 371 GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--------TCMIDIL 422
G+ P+ T+ +L AC+ + G+ + Y +R H Y C+ID+
Sbjct: 518 GVAPNAYTISCILMACAHLAAIRIGKQ-----IHAYVLR--HHRYESSAYFVANCLIDMY 570
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
S+ G ++ A+ + M AI W ++++ +HG
Sbjct: 571 SKCGDVDTARHVFDSMS-QKSAISWTSMMTGYGMHG 605
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 127/542 (23%), Positives = 228/542 (42%), Gaps = 88/542 (16%)
Query: 103 LPEKNIVMYNTMITGL----LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREA 158
LP + + ++ TG+ L G + + + + ++ W +I ++ G A
Sbjct: 87 LPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSA 146
Query: 159 IDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDM 218
I++ M G D FT VL ACG L + G H I N + NVF+ +ALV M
Sbjct: 147 INVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAM 206
Query: 219 YCKCKSIKYAESVFRTMAWK---NVVSWTAMLVGYGQNGCSEEAVKIFCNM------QRN 269
Y +C S++ A +F + + +V+SW +++ + ++ + A+ +F M +
Sbjct: 207 YSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPT 266
Query: 270 GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
D ++ +++ +C +L ++ + + HG ++ G + V NAL+ Y KCG +E++
Sbjct: 267 NERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENA 326
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGK--------------------------------- 356
++FN M +D VSW A+V+GY++ G
Sbjct: 327 VKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQR 386
Query: 357 --ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
++E ++LF +M+ G P+ VT+I VLSAC+ G +G +K + +D
Sbjct: 387 GCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDF 446
Query: 415 ---------YTCMIDILSRAGRLEEAKSFINKMPFPP-DAIGWATLLSSCRIHGNVEIGK 464
Y +ID+ S+ + A+S + +P + + W ++ H
Sbjct: 447 GGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGG---HAQYGDSN 503
Query: 465 WAAESLLEL--DPYN--PASYVLLSSIYASK-------GKWDHVSQLRRTMREKGVRKDP 513
A + +E+ +PY P +Y + + A GK H LR E
Sbjct: 504 DALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVA 563
Query: 514 GCSWIKYK------SRVHIF------SADDWSSPYSDQIY----AELEKLNRKMIKEGYV 557
C Y + H+F SA W+S + +E + KM K G+V
Sbjct: 564 NCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFV 623
Query: 558 PD 559
PD
Sbjct: 624 PD 625
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 261/647 (40%), Positives = 399/647 (61%), Gaps = 17/647 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SWN ++SG+A +G V+DA +V++ M + + + + + + CV
Sbjct: 147 MPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLF 206
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G + + ++ + + L+ + K I +A++ FD + +++V +NT+ITG +
Sbjct: 207 GSRENWALVSW---------NCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQ 257
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G ++E+R+LF D +WT M++G +QN + EA +LF M ++ ++ ++
Sbjct: 258 NGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRM----PERNEVSWNAM 313
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L +E K++ + NV + ++ Y +C I A+++F M ++
Sbjct: 314 LAGYVQGERVEMAKELFDVMPCR----NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDP 369
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW AM+ GY Q+G S EA+++F M+R G + + S +S+CA++ +LE G Q HGR
Sbjct: 370 VSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGR 429
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ G + V NAL+ Y KCG+IE+++ LF EM +D VSW +++GY++ G E
Sbjct: 430 LVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEA 489
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ FE M GLKPD+ T++ VLSACS GLV+KGR YF M ++YG+RP HY CM+D
Sbjct: 490 LRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVD 549
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG LEEA + + MPF PDA W TLL + R+HGN E+ + AA+ + ++P N
Sbjct: 550 LLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGM 609
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS++YAS G+W V +LR MR+KGV+K PG SWI+ +++ H FS D P D+I
Sbjct: 610 YVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEI 669
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
+A LE L+ +M K GYV S VLHDVE EK +M+ +HSE+LA+A+G++ + G PIRV
Sbjct: 670 FAFLEDLDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRV 729
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+KNLRVC DCHNA KY++K+T R I++RD RFH FK+G CSCGD+W
Sbjct: 730 IKNLRVCEDCHNAIKYMAKVTGRLIILRDNNRFHHFKDGSCSCGDYW 776
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 214/463 (46%), Gaps = 47/463 (10%)
Query: 81 SPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSI 140
+ ++ Y + G A+ FDE+PE+++V +N MI G +R + ++R LF M ++D
Sbjct: 94 NAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVC 153
Query: 141 SWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFI 200
SW T+++G QNG +A +F M + + ++ ++L+A LEE A +
Sbjct: 154 SWNTILSGYAQNGCVDDARRVFDRMPEK----NDVSWNALLSAYVQNSKLEE-----ACV 204
Query: 201 IRNDHKDNVFVG-SALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEA 259
+ ++ V + L+ + K K I A F +M ++VVSW ++ GY QNG +EA
Sbjct: 205 LFGSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEA 264
Query: 260 VKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR----------SLVTGLIS- 308
++F + D FT +++S +EE + R +++ G +
Sbjct: 265 RQLFDESPVH----DVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQG 320
Query: 309 ----------------FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
++ N ++T Y +CG I ++ LF++M RD VSW A+++GY+
Sbjct: 321 ERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYS 380
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
+ G + E + LF M G + + + LS C+ +E G+ +VK G
Sbjct: 381 QSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKG-GYETGC 439
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLE 472
++ + + G +EEA +M D + W T+++ HG E ES+
Sbjct: 440 FVGNALLLMYCKCGSIEEANDLFKEMA-GKDIVSWNTMIAGYSRHGFGEEALRFFESMKR 498
Query: 473 --LDPYNPASYVLLSSIYASKGKWDHVSQLRRTM-REKGVRKD 512
L P + A+ V + S + G D Q TM ++ GVR +
Sbjct: 499 EGLKP-DDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPN 540
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 164/350 (46%), Gaps = 30/350 (8%)
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
+ +I +N I+ +R G E+ R+F+ M S+S+ MI+G ++NG A LF E
Sbjct: 56 DSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDE 115
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M D ++ ++ L + +++ + D V + ++ Y +
Sbjct: 116 M----PERDLVSWNVMIKGYVRNRNLGKARELFERMPERD----VCSWNTILSGYAQNGC 167
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A VF M KN VSW A+L Y QN EEA +F + + + + LG +
Sbjct: 168 VDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKK 227
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
+ E QF V ++S+ N ++T Y + G I+++ +LF+E V D +W
Sbjct: 228 ----KKIVEARQFFDSMKVRDVVSW----NTIITGYAQNGEIDEARQLFDESPVHDVFTW 279
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
TA+VSGY + E +LF++M +EV+ +L+ + VE + F++M
Sbjct: 280 TAMVSGYIQNRMVEEARELFDRMPER----NEVSWNAMLAGYVQGERVEMAKELFDVM-- 333
Query: 405 EYGIRPIHD--HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
P + + MI ++ G++ EAK+ +KMP D + WA +++
Sbjct: 334 -----PCRNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIA 377
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 261/668 (39%), Positives = 403/668 (60%), Gaps = 25/668 (3%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLML-----KDGLGNLSRITFSTMLIMSSSRRCVD 59
D +SWN ++S H + A+ +++ M K I+ +L S + V
Sbjct: 223 DVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVP 282
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+++HG+ ++ G VFVG+ L+D YAK GL+ +A + F+ + K++V +N M+ G
Sbjct: 283 QTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYS 342
Query: 120 RRGLVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
+ G E + LF+ M+ + D ++WT +I G Q G EA++LFR+M G +
Sbjct: 343 QSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCV 402
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRN----------DHKDNVFVGSALVDMYCKCKSI 225
T SVL+AC L A +G +IHA+ ++N +++ V +AL+DMY KC+S
Sbjct: 403 TIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSF 462
Query: 226 KYAESVFRTMAW--KNVVSWTAMLVGYGQNGCSEEAVKIFCNM--QRNGIEPDDFTLGSV 281
K A S+F + +NVV+WT M+ G+ Q G S +A+K+F M + G+ P+ +T+ +
Sbjct: 463 KAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCI 522
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLI--SFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
+ +CA+LA++ G Q H L S V+N L+ Y KCG+++ + +F+ M+ +
Sbjct: 523 LMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQK 582
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
+SWT++++GY G+ +E +D+F+KM G PD++T + VL ACS G+V++G YF
Sbjct: 583 SAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYF 642
Query: 400 EIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+ M +YG+ P +HY C ID+L+R+GRL++A + MP P A+ W LLS+CR+H N
Sbjct: 643 DSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSN 702
Query: 460 VEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIK 519
VE+ + A L+E++ N SY L+S+IYA+ G+W V+++R M++ G++K PGCSW++
Sbjct: 703 VELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQ 762
Query: 520 YKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHH 579
+ F D S P S QIYA LE L ++ GYVP+ + LHDV+ EK +L H
Sbjct: 763 GQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEH 822
Query: 580 SEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNG 639
SEKLA+A+GLL PG PIR+ KNLRVC DCH+A YISKI EI+VRD RFH FKNG
Sbjct: 823 SEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNG 882
Query: 640 ECSCGDFW 647
CSCG +W
Sbjct: 883 SCSCGGYW 890
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 145/516 (28%), Positives = 241/516 (46%), Gaps = 100/516 (19%)
Query: 6 GVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIH 65
V WNLLI H G ++ A+ V ML+ G T +L G H
Sbjct: 120 AVWWNLLIREHIKQGRLDSAINVSCRMLRAGT-RPDHFTLPHVLKACGELPSYRCGSAFH 178
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
G I GF S VF+ + LV MY++ G + +A FDE+ ++ I
Sbjct: 179 GLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGI----------------- 221
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL------EGLAMDQFTFGS 179
D ISW ++++ +++ A+DLF +M L D + +
Sbjct: 222 -----------DDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 270
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L ACG L A+ + K++H IRN +VFVG+AL+D Y KC ++ A VF M +K+
Sbjct: 271 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 330
Query: 240 VVSWTAMLVGYGQN-----------------------------------GCSEEAVKIFC 264
VVSW AM+ GY Q+ GCS EA+ +F
Sbjct: 331 VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFR 390
Query: 265 NMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF----------ITVSN 314
M +G P+ T+ SV+S+CA+L + +GT+ H SL L++ + V N
Sbjct: 391 QMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYN 450
Query: 315 ALVTFYGKCGNIEDSHRLFNEMNV--RDEVSWTALVSGYAKFGKANETIDLFEKMLS--H 370
AL+ Y KC + + + +F+++ + R+ V+WT ++ G+A++G +N+ + LF +M+S +
Sbjct: 451 ALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPY 510
Query: 371 GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--------TCMIDIL 422
G+ P+ T+ +L AC+ + G+ + Y +R H Y C+ID+
Sbjct: 511 GVAPNAYTISCILMACAHLAAIRIGKQ-----IHAYVLR--HHRYESSAYFVANCLIDMY 563
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
S+ G ++ A+ + M AI W ++++ +HG
Sbjct: 564 SKCGDVDTARHVFDSMS-QKSAISWTSMMTGYGMHG 598
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 127/542 (23%), Positives = 228/542 (42%), Gaps = 88/542 (16%)
Query: 103 LPEKNIVMYNTMITGL----LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREA 158
LP + + ++ TG+ L G + + + + ++ W +I ++ G A
Sbjct: 80 LPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSA 139
Query: 159 IDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDM 218
I++ M G D FT VL ACG L + G H I N + NVF+ +ALV M
Sbjct: 140 INVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAM 199
Query: 219 YCKCKSIKYAESVFRTMAWK---NVVSWTAMLVGYGQNGCSEEAVKIFCNM------QRN 269
Y +C S++ A +F + + +V+SW +++ + ++ + A+ +F M +
Sbjct: 200 YSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPT 259
Query: 270 GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
D ++ +++ +C +L ++ + + HG ++ G + V NAL+ Y KCG +E++
Sbjct: 260 NERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENA 319
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGK--------------------------------- 356
++FN M +D VSW A+V+GY++ G
Sbjct: 320 VKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQR 379
Query: 357 --ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
++E ++LF +M+ G P+ VT+I VLSAC+ G +G +K + +D
Sbjct: 380 GCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDF 439
Query: 415 ---------YTCMIDILSRAGRLEEAKSFINKMPFPP-DAIGWATLLSSCRIHGNVEIGK 464
Y +ID+ S+ + A+S + +P + + W ++ H
Sbjct: 440 GGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGG---HAQYGDSN 496
Query: 465 WAAESLLEL--DPYN--PASYVLLSSIYASK-------GKWDHVSQLRRTMREKGVRKDP 513
A + +E+ +PY P +Y + + A GK H LR E
Sbjct: 497 DALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVA 556
Query: 514 GCSWIKYK------SRVHIF------SADDWSSPYSDQIY----AELEKLNRKMIKEGYV 557
C Y + H+F SA W+S + +E + KM K G+V
Sbjct: 557 NCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFV 616
Query: 558 PD 559
PD
Sbjct: 617 PD 618
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 249/562 (44%), Positives = 369/562 (65%)
Query: 86 MYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTM 145
MY K+G I +A F+ +P +NI+ +N +I G ++ G ++ + ++F M +++ +W M
Sbjct: 1 MYFKMGEIQEAIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAM 60
Query: 146 ITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH 205
++GL+Q + LFREM G D+FT GSVL C GL A GKQ+HA++++ +
Sbjct: 61 VSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGY 120
Query: 206 KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCN 265
+ N+ VGS+L MY K S+ E V + M +NVV+W ++ G QNG E + ++
Sbjct: 121 EFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNM 180
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M+ +G+ PD TL SVISS A LA+L +G Q H ++ G S + V ++L++ Y KCG
Sbjct: 181 MKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGC 240
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+EDS + + D V W+++++ Y G+ E + LFE+M GL ++VT + +L A
Sbjct: 241 LEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYA 300
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
CS GL EKG +F++MV++YG++P +HYTC++D+L R+G L+EA++ I MP D +
Sbjct: 301 CSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVV 360
Query: 446 GWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
W TLLS+CRIH N ++ AE +L L+P + A+YVLLS+I+AS +W VS++R TMR
Sbjct: 361 IWKTLLSACRIHRNADMATRTAEEILRLNPQDSATYVLLSNIHASAKRWKDVSKVRTTMR 420
Query: 506 EKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLH 565
++ V+K+PG SW++ K+RV FS D S P S++I L++L +M GYVPD ++V H
Sbjct: 421 DRNVKKEPGVSWLEVKNRVFQFSMGDKSHPMSEEIDLYLKELMEEMKLRGYVPDTATVFH 480
Query: 566 DVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREI 625
D + EK L +HSEKLAIAFGL+ IPPG PIRV+KNLR+CSDCH A K IS I REI
Sbjct: 481 DTDSEEKENSLVNHSEKLAIAFGLMNIPPGSPIRVMKNLRICSDCHVAIKLISDINNREI 540
Query: 626 LVRDAVRFHLFKNGECSCGDFW 647
+VRD RFH FK+G+CSCGD+W
Sbjct: 541 IVRDTSRFHHFKHGKCSCGDYW 562
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 171/382 (44%), Gaps = 63/382 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLS------------------- 41
MP + +S N+LI+GH HG ++ A+KV++ ML+ + +
Sbjct: 18 MPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLF 77
Query: 42 -----------RITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKL 90
T ++L + R G+Q+H ++LK+G+ + VGS L MY K
Sbjct: 78 REMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKS 137
Query: 91 GLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLM 150
G + + ++ + +N+V +NT +I G
Sbjct: 138 GSLGEGEKVIKAMRIRNVVAWNT-------------------------------LIAGNA 166
Query: 151 QNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVF 210
QNG +DL+ M++ GL D+ T SV+++ L L +G+QIHA I+ V
Sbjct: 167 QNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVA 226
Query: 211 VGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
V S+L+ MY KC ++ + + V W++M+ YG +G EEAV +F M++ G
Sbjct: 227 VLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEG 286
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT-GLISFITVSNALVTFYGKCGNIEDS 329
+ +D T S++ +C++ E+G F + GL + +V G+ G ++++
Sbjct: 287 LGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEA 346
Query: 330 HRLFNEMNVR-DEVSWTALVSG 350
+ M + D V W L+S
Sbjct: 347 EAMIRSMPLEADVVIWKTLLSA 368
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 267/648 (41%), Positives = 401/648 (61%), Gaps = 36/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSWN +I+GH +G +A + +N M G + TF++++ +S + + L
Sbjct: 264 MENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAG-AKPTHATFASVIKSCASLKELGL 322
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
R +H LK G + V + L+ K I DA F
Sbjct: 323 VRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFS------------------- 363
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
L G++ +SWT MI+G +QNG +A++LF MR EG+ + FT+ ++
Sbjct: 364 ---------LMHGVQS--VVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTI 412
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LT + E IHA +I+ +++ + VG+AL+D + K +I A VF + K+V
Sbjct: 413 LTVQHAVFISE----IHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDV 468
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC-ANLASLEEGTQFHG 299
++W+AML GY Q G +EEA KIF + R GI+P++FT S+I++C A AS+E+G QFH
Sbjct: 469 IAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHA 528
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
++ L + + VS++LVT Y K GNIE +H +F RD VSW +++SGYA+ G+A +
Sbjct: 529 YAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKK 588
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+++FE+M L+ D +T IGV+SAC+ AGLV KG++YF IM+ ++ I P +HY+CMI
Sbjct: 589 ALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMI 648
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+ SRAG L +A IN MPFPP A W +L++ R+H N+E+GK AAE ++ L+P + A
Sbjct: 649 DLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSA 708
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+YVLLS+IYA+ G W +R+ M ++ V+K+PG SWI+ K++ + F A D S P SD
Sbjct: 709 AYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDH 768
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY++L +LN ++ GY PD + V HD+E +K +L+HHSE+LAIAFGL+ P +P++
Sbjct: 769 IYSKLSELNTRLRDVGYQPDTNYVFHDIEDEQKETILSHHSERLAIAFGLIATLPEIPLQ 828
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+VKNLRVC DCH+ K +S + +R I+VRD+ RFH FK G CSCGD+W
Sbjct: 829 IVKNLRVCGDCHSFIKLVSLVEKRYIVVRDSNRFHHFKGGLCSCGDYW 876
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 242/480 (50%), Gaps = 53/480 (11%)
Query: 5 DGVSWNLLISGHASHGSVNDAV-KVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQ 63
D VSWN L++G+ S ND V +++ LM +G T ST++ +++ V +G Q
Sbjct: 167 DVVSWNSLLTGY-SWNRFNDQVWELFCLMQVEGY-RPDYYTVSTVIAALANQGAVAIGMQ 224
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
IH ++K GF E ++ N++I+ L + G+
Sbjct: 225 IHALVVKLGF-------------------------------ETERLVCNSLISMLSKSGM 253
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
+ ++R +F M++KDS+SW +MI G + NG + EA + F M+L G TF SV+ +
Sbjct: 254 LRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKS 313
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM-AWKNVVS 242
C L L + +H +++ N V +AL+ KCK I A S+F M ++VVS
Sbjct: 314 CASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVS 373
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL 302
WTAM+ GY QNG +++AV +F M+R G++P+ FT ++++ + ++ H +
Sbjct: 374 WTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILT----VQHAVFISEIHAEVI 429
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
T +V AL+ + K GNI D+ ++F + +D ++W+A+++GYA+ G+ E
Sbjct: 430 KTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAK 489
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSR-AGLVEKGRHYFEIMVKEYGIRPIHDHYTC---- 417
+F ++ G+KP+E T +++AC+ VE+G+ + Y I+ ++ C
Sbjct: 490 IFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQF-----HAYAIKLRLNNALCVSSS 544
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
++ + ++ G +E A + D + W +++S HG K A E E+ N
Sbjct: 545 LVTLYAKRGNIESAHEIFKRQK-ERDLVSWNSMISGYAQHGQ---AKKALEVFEEMQKRN 600
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 218/468 (46%), Gaps = 53/468 (11%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P D N L+ ++ +A+ ++ + + GL S T S +L + + +G
Sbjct: 63 PLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDS-YTMSCVLSVCAGSFNGTVG 121
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
Q+H +K G ++ VG+ LVDMY K G + D +R FDE+ ++++V
Sbjct: 122 EQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVV------------ 169
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
SW +++TG N + +LF M++EG D +T +V+
Sbjct: 170 -------------------SWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVI 210
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
A A+ G QIHA +++ + V ++L+ M K ++ A VF M K+ V
Sbjct: 211 AALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSV 270
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW +M+ G+ NG EA + F NMQ G +P T SVI SCA+L L H ++
Sbjct: 271 SWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKT 330
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN-VRDEVSWTALVSGYAKFGKANET 360
L +GL + V AL+ KC I+D+ LF+ M+ V+ VSWTA++SGY + G ++
Sbjct: 331 LKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQA 390
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY----- 415
++LF M G+KP+ T +L+ +H + + E I +Y
Sbjct: 391 VNLFSLMRREGVKPNHFTYSTILTV----------QH--AVFISEIHAEVIKTNYEKSSS 438
Query: 416 --TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
T ++D + G + +A + ++ D I W+ +L+ G E
Sbjct: 439 VGTALLDAFVKIGNISDAVK-VFELIETKDVIAWSAMLAGYAQAGETE 485
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 126/234 (53%), Gaps = 2/234 (0%)
Query: 226 KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
++A+ +F +++ +L Y + ++EA+ +F ++ R+G+ PD +T+ V+S C
Sbjct: 53 RFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVC 112
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
A + G Q H + + GL+ ++V N+LV Y K GN+ D R+F+EM RD VSW
Sbjct: 113 AGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWN 172
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE 405
+L++GY+ ++ +LF M G +PD T+ V++A + G V G ++VK
Sbjct: 173 SLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVK- 231
Query: 406 YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
G +I +LS++G L +A+ + M D++ W ++++ I+G
Sbjct: 232 LGFETERLVCNSLISMLSKSGMLRDARVVFDNME-NKDSVSWNSMIAGHVINGQ 284
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 270/666 (40%), Positives = 400/666 (60%), Gaps = 28/666 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKV-------YNLMLKDGLGNLSRITFSTMLIMSSSRRC 57
D VSWN +++ + G A+++ Y+L L+ IT +L +S
Sbjct: 195 DIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRP-----DAITLVNILPACASVFA 249
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
+ G+Q+HG ++ G VFVG+ LV MYAK + +A + F+ + +K++V +N M+TG
Sbjct: 250 LQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTG 309
Query: 118 LLRRGLVEESRRLFRGMKDKD----SISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
+ G + + LF+ M+++D I+W+ +I G Q G EA+D+FR+M+L GL +
Sbjct: 310 YSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPN 369
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRN-------DHKDNVFVGSALVDMYCKCKSIK 226
T S+L+ C + AL GKQ HA++I+N D +D++ V + L+DMY KCKS +
Sbjct: 370 VVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYR 429
Query: 227 YAESVFRTMAWK--NVVSWTAMLVGYGQNGCSEEAVKIFCNM--QRNGIEPDDFTLGSVI 282
A S+F ++ K NVV+WT M+ GY Q+G + +A+K+F + Q+ ++P+ FTL +
Sbjct: 430 VARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCAL 489
Query: 283 SSCANLASLEEGTQFHGRSLVTGLIS-FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE 341
+CA L L G Q H +L S + V N L+ Y K G+I+ + +F+ M +R+
Sbjct: 490 MACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNV 549
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEI 401
VSWT+L++GY G+ E + LF++M G D +T + VL ACS +G+V++G YF
Sbjct: 550 VSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHD 609
Query: 402 MVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
MVK +GI P +HY CM+D+L RAGRL EA I M P A+ W LLS+ RIH N+E
Sbjct: 610 MVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIE 669
Query: 462 IGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYK 521
+G++AA L EL N SY LLS++YA+ +W V+++R M+ G+RK PGCSWI+ K
Sbjct: 670 LGEYAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGK 729
Query: 522 SRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSE 581
F D S P S+QIY L L +++ GYVP S LHDV+ EK +L HSE
Sbjct: 730 KSTTTFFVGDRSHPESEQIYNLLLDLIKRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSE 789
Query: 582 KLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGEC 641
KLA+A+G+L PG PIR+ KNLR+C DCH+A YIS I EI++RD+ RFH FK G C
Sbjct: 790 KLAVAYGILTTAPGQPIRIHKNLRICGDCHSALTYISMIIDHEIVLRDSSRFHHFKKGSC 849
Query: 642 SCGDFW 647
SC +W
Sbjct: 850 SCRSYW 855
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 146/513 (28%), Positives = 238/513 (46%), Gaps = 84/513 (16%)
Query: 1 MPFHDGVSW-NLLISGHASHGSVNDAVKVYNLMLKDGLGNL-SRITFSTMLIMSSSRRCV 58
+P H V W N LI G ++D + Y M + LG L TF +L +
Sbjct: 86 IPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQR--LGWLPDHYTFPFVLKACGEIPSL 143
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G +H + G GS VF+ + +V MY + G + DA + FDE+ E+ I
Sbjct: 144 RHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKI---------- 193
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDL-FREMRLEGLAM--DQF 175
+D +SW +++ +Q G R A+ + FR L + D
Sbjct: 194 ------------------EDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAI 235
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
T ++L AC + AL+ GKQ+H F +RN D+VFVG+ALV MY KC + A VF +
Sbjct: 236 TLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGI 295
Query: 236 AWKNVVSWTAMLVGYGQNGCSE-----------------------------------EAV 260
K+VVSW AM+ GY Q G + EA+
Sbjct: 296 KKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEAL 355
Query: 261 KIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF--------ITV 312
+F MQ G+EP+ TL S++S CA++ +L G Q H ++ +++ + V
Sbjct: 356 DVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAY-VIKNILNLNWNDKEDDLLV 414
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDE--VSWTALVSGYAKFGKANETIDLFEKMLSH 370
N L+ Y KC + + +F+ + +D+ V+WT ++ GYA+ G+AN+ + LF ++
Sbjct: 415 LNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQ 474
Query: 371 --GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
LKP+ TL L AC+R G + GR ++ + C+ID+ S++G +
Sbjct: 475 KTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDI 534
Query: 429 EEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+ A++ + M + + W +L++ +HG E
Sbjct: 535 DAARAVFDNMKL-RNVVSWTSLMTGYGMHGRGE 566
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 177/343 (51%), Gaps = 20/343 (5%)
Query: 82 PLVDMYAKLGLIYDAKRGFDELPEKNIV-MYNTMITGLLRRGLVEESRRLFRGMKDKDSI 140
PL+ + + + +AK ++ M++ + + G E+ L + + S
Sbjct: 32 PLISLLRQCKTLINAKLAHQQIFVHGFTEMFSYAVGAYIECGASAEAVSLLQRLIPSHST 91
Query: 141 S--WTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHA 198
W +I ++ GL + + + +M+ G D +TF VL ACG + +L G +HA
Sbjct: 92 VFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHA 151
Query: 199 FIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK---NVVSWTAMLVGYGQNGC 255
+ N NVF+ +++V MY +C ++ A +F + + ++VSW ++L Y Q G
Sbjct: 152 IVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQ 211
Query: 256 SEEAVKIFCNMQRN---GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITV 312
S A++I M + + PD TL +++ +CA++ +L+ G Q HG S+ GL+ + V
Sbjct: 212 SRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFV 271
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGL 372
NALV+ Y KC + +++++F + +D VSW A+V+GY++ G + + LF+ M +
Sbjct: 272 GNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDI 331
Query: 373 KPDEVTLIGVLSACSRAGLVEKGRHYFEIM-----VKEYGIRP 410
K D +T V+ AG +KG H FE + ++ YG+ P
Sbjct: 332 KLDVITWSAVI-----AGYAQKG-HGFEALDVFRQMQLYGLEP 368
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 148/312 (47%), Gaps = 17/312 (5%)
Query: 213 SALVDMYCKCKSIKYAESVFRTM--AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
S V Y +C + A S+ + + + V W A++ + G ++ + +C MQR G
Sbjct: 63 SYAVGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLG 122
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
PD +T V+ +C + SL G H GL S + + N++V YG+CG ++D+H
Sbjct: 123 WLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAH 182
Query: 331 RLFNEM---NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH---GLKPDEVTLIGVLS 384
++F+E+ + D VSW ++++ Y + G++ + + +M +H L+PD +TL+ +L
Sbjct: 183 QMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILP 242
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDA 444
AC+ ++ G+ V+ + + ++ + ++ ++ EA + D
Sbjct: 243 ACASVFALQHGKQVHGFSVRNGLVDDVFVG-NALVSMYAKCSKMNEANKVFEGIK-KKDV 300
Query: 445 IGWATLLSSCRIHGNVE----IGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQL 500
+ W +++ G+ + + K E ++LD ++ + + YA KG +
Sbjct: 301 VSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVI---AGYAQKGHGFEALDV 357
Query: 501 RRTMREKGVRKD 512
R M+ G+ +
Sbjct: 358 FRQMQLYGLEPN 369
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 266/641 (41%), Positives = 395/641 (61%), Gaps = 4/641 (0%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN +I G++ S A+ Y ML G+ + TF +L + G+QIHGH+
Sbjct: 100 WNTMIRGNSLSSSPVGAIDFYVRMLLCGV-EPNSYTFPFLLKSCAKVGATQEGKQIHGHV 158
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
LK G S FV + L++MYA+ G + A+ F + ++ V + +ITG RG ++++R
Sbjct: 159 LKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDAR 218
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
RLF + +D++SW MI G Q+G EA+ F+EM+ +A ++ T +VL+AC
Sbjct: 219 RLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSG 278
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
+LE G + ++I + N+ + +AL+DMY KC + A +F + K+++SW M+
Sbjct: 279 SLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIG 338
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG--RSLVTGL 306
GY +EA+ +F MQ++ +EP+D T S++ +CA L +L+ G H GL
Sbjct: 339 GYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGL 398
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ ++ +L+ Y KCGNIE + ++F M + SW A++SG A G AN ++LF +
Sbjct: 399 TN-TSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQ 457
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M G +PD++T +GVLSACS AGLVE GR F MV++Y I P HY CMID+L RAG
Sbjct: 458 MRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAG 517
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+EA++ + M PD W +LL +CR+HGNVE+G++AA+ L EL+P NP +YVLLS+
Sbjct: 518 LFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSN 577
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IYA+ G+WD V+++R + +KG++K PGCS I+ S VH F D S IY L++
Sbjct: 578 IYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDE 637
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
+++ + K G+VPD S VL+D++ K L+HHSEKLAIAFGL+ P IR+VKNLRV
Sbjct: 638 IDQLLEKAGHVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKNLRV 697
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C +CH+A K ISKI REI+ RD RFH FK+G CSC D+W
Sbjct: 698 CGNCHSAIKLISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 196/455 (43%), Gaps = 100/455 (21%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VSWN +I+G+A G +A+ + M + + + T T+L + ++L
Sbjct: 224 IPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAP-NESTMVTVLSACAQSGSLEL 282
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G + I G GS + + + L+DMY+K G + A+ F+ + EK+I+ +N MI G
Sbjct: 283 GNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSH 342
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+E A+ LFR+M+ + + TF S+
Sbjct: 343 MNSYKE-------------------------------ALALFRKMQQSNVEPNDVTFVSI 371
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVG-------SALVDMYCKCKSIKYAESVFR 233
L AC L AL+ GK IHA+I D F+G ++L+DMY KC +I+ A+ VF
Sbjct: 372 LPACAYLGALDLGKWIHAYI------DKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFA 425
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE 293
M K++ SW AM+ G +G + A+++F M+ G EPDD T V+S+C++ +E
Sbjct: 426 GMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVE- 484
Query: 294 GTQFHGRSLVTGLISFITVSNAL------VTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
GR + ++ +S L + G+ G +++ L M
Sbjct: 485 ----LGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNME---------- 530
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG----RHYFEIMV 403
+KPD +L AC G VE G +H FE+
Sbjct: 531 ------------------------MKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEP 566
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
+ G Y + +I + AGR ++ K+
Sbjct: 567 ENPGA------YVLLSNIYATAGRWDDVARIRTKL 595
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 176/401 (43%), Gaps = 75/401 (18%)
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK---SIKYAESVFRTM 235
++L+ C L KQIH+ II+ + F S L++ +C ++ YA +F ++
Sbjct: 37 TLLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIE-FCAISPFGNLSYALLLFESI 92
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
N W M+ G + A+ + M G+EP+ +T ++ SCA + + +EG
Sbjct: 93 EQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGK 152
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS------ 349
Q HG L GL S V +L+ Y + G + + +F++ ++RD VS+TAL++
Sbjct: 153 QIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRG 212
Query: 350 -------------------------GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
GYA+ G+ E + F++M + P+E T++ VLS
Sbjct: 213 CLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLS 272
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSF---------- 434
AC+++G +E G ++ ++++G+ +ID+ S+ G L++A+
Sbjct: 273 ACAQSGSLELG-NWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDII 331
Query: 435 ------------------------INKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL 470
+ + P+ + + ++L +C G +++GKW +
Sbjct: 332 SWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYI 391
Query: 471 LE--LDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
+ L N + + L +YA G + Q+ M+ K +
Sbjct: 392 DKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSL 432
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 264/647 (40%), Positives = 381/647 (58%), Gaps = 33/647 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN +++G+A +G AV+V L +++ IT ++L + + + +
Sbjct: 203 MPQRDLVSWNTVVAGYAQNGFARRAVQVV-LQMQEAGQKPDSITLVSVLPAVADLKALRI 261
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR IHG+ + GF V V + ++D Y K G
Sbjct: 262 GRSIHGYAFRAGFEYMVNVATAMLDTYFKCGS---------------------------- 293
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
V +R +F+GM ++ +SW TMI G QNG EA F +M EG+ +
Sbjct: 294 ---VRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGA 350
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L LE G+ +H + +V V ++L+ MY KCK + A SVF + K V
Sbjct: 351 LHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTV 410
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+W AM++GY QNGC EA+ +FC MQ + I+PD FTL SVI++ A+L+ + HG
Sbjct: 411 VTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGL 470
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ T + + V AL+ + KCG I+ + +LF+ M R ++W A++ GY G E
Sbjct: 471 AIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREA 530
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+DLF +M + +KP+E+T + V++ACS +GLVE+G +YFE M + YG+ P DHY M+D
Sbjct: 531 LDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVD 590
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAGRL++A FI MP P +L +CRIH NVE+G+ A+ L +LDP +
Sbjct: 591 LLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGY 650
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
+VLL+++YAS WD V+++R M +KG++K PGCS ++ ++ VH F + + P S +I
Sbjct: 651 HVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKRI 710
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
YA LE L +M GYVPD +S+ HDVE K ++L+ HSE+LAIAFGLL G I +
Sbjct: 711 YAYLETLGDEMKAAGYVPDTNSI-HDVEEDVKEQLLSSHSERLAIAFGLLNTRHGTAIHI 769
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCH ATKYIS +T REI+VRD RFH FKNG CSCGD+W
Sbjct: 770 RKNLRVCGDCHEATKYISLVTGREIIVRDLRRFHHFKNGICSCGDYW 816
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 151/511 (29%), Positives = 248/511 (48%), Gaps = 80/511 (15%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V ++ ++ G+A + ++ DAV+ Y M D + + F+ +L +S + GR+IHG
Sbjct: 108 VLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVV-YDFTYLLQLSGENLDLRRGREIHG 166
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++ GF S +F + +V++YAK I DA + F+ +P++++V +NT
Sbjct: 167 MVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNT------------- 213
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
++ G QNG R A+ + +M+ G D T SVL A
Sbjct: 214 ------------------VVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVAD 255
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L AL G+ IH + R + V V +A++D Y KC S++ A VF+ M+ +NVVSW M
Sbjct: 256 LKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTM 315
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ GY QNG SEEA F M G+EP + ++ + +CANL LE G H R L
Sbjct: 316 IDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVH-RLLDEKK 374
Query: 307 ISF-ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
I F ++V N+L++ Y KC ++ + +F + + V+W A++ GYA+ G NE ++LF
Sbjct: 375 IGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFC 434
Query: 366 KMLSHGLKPDEVTLIGVLSAC-----------------------------------SRAG 390
+M SH +KPD TL+ V++A ++ G
Sbjct: 435 EMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCG 494
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM---PFPPDAIGW 447
++ R F++M + + I + MID G EA N+M P+ I +
Sbjct: 495 AIQTARKLFDLMQERHVIT-----WNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITF 549
Query: 448 ATLLSSCRIHGNVEIGKWAAESLLE---LDP 475
+++++C G VE G + ES+ E L+P
Sbjct: 550 LSVIAACSHSGLVEEGMYYFESMKENYGLEP 580
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 203/395 (51%), Gaps = 15/395 (3%)
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
+ E+ R+F ++ K + + TM+ G +N R+A+ + MR + + + F +L
Sbjct: 92 ITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQL 151
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
G L L G++IH +I N + N+F +A+V++Y KC+ I+ A +F M +++VSW
Sbjct: 152 SGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSW 211
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
++ GY QNG + AV++ MQ G +PD TL SV+ + A+L +L G HG +
Sbjct: 212 NTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFR 271
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
G + V+ A++ Y KCG++ + +F M+ R+ VSW ++ GYA+ G++ E
Sbjct: 272 AGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFAT 331
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F KML G++P V+++G L AC+ G +E+GR Y ++ E I +I + S
Sbjct: 332 FLKMLDEGVEPTNVSMMGALHACANLGDLERGR-YVHRLLDEKKIGFDVSVMNSLISMYS 390
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN--PASY 481
+ R++ A S + + W ++ +G V A E+ ++ P S+
Sbjct: 391 KCKRVDIAASVFGNLKHKT-VVTWNAMILGYAQNGCV---NEALNLFCEMQSHDIKPDSF 446
Query: 482 VLLSSIYA-------SKGKWDHVSQLRRTMREKGV 509
L+S I A + KW H + RT+ +K V
Sbjct: 447 TLVSVITALADLSVTRQAKWIHGLAI-RTLMDKNV 480
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 147/326 (45%), Gaps = 5/326 (1%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
+L+E QI II+N + + L+ ++CK SI A VF + K V + ML
Sbjct: 56 SLKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLK 115
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
GY +N +AV+ + M+ + + P + ++ L G + HG + G S
Sbjct: 116 GYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQS 175
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
+ A+V Y KC IED++++F M RD VSW +V+GYA+ G A + + +M
Sbjct: 176 NLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQ 235
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
G KPD +TL+ VL A + + GR + G + + T M+D + G +
Sbjct: 236 EAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRA-GFEYMVNVATAMLDTYFKCGSV 294
Query: 429 EEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIY 488
A+ M + + W T++ +G E +L+ + P + ++ +++
Sbjct: 295 RSARLVFKGMS-SRNVVSWNTMIDGYAQNGESEEAFATFLKMLD-EGVEPTNVSMMGALH 352
Query: 489 ASK--GKWDHVSQLRRTMREKGVRKD 512
A G + + R + EK + D
Sbjct: 353 ACANLGDLERGRYVHRLLDEKKIGFD 378
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 255/641 (39%), Positives = 402/641 (62%), Gaps = 3/641 (0%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN ++ G+A A+K+Y +M+ GL S TF +L + + + G+QIHGH+
Sbjct: 34 WNTMLRGYALSSDPVSALKLYVVMISLGLLPNS-YTFPFLLKSCAKSKAFEEGQQIHGHV 92
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
LK G+ ++V + L+ MYA+ G + DA + FD +++V Y +ITG G + ++
Sbjct: 93 LKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQ 152
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
+F + KD +SW MI+G + G +EA++LF+EM + D+ T +VL+AC
Sbjct: 153 EMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSR 212
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
++E G+Q+H++I + N+ + +AL+D+Y KC ++ A +F ++ K+VVSW ++
Sbjct: 213 SVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIG 272
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG--RSLVTGL 306
GY +EA+ +F M R+G P+D T+ S++ +CA+L +++ G H + +
Sbjct: 273 GYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDV 332
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ ++ +L+ Y KCG+IE +H++FN M + SW A++ G+A G+AN DLF +
Sbjct: 333 TNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSR 392
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M +G++PD++T +G+LSACS +G ++ GRH F+ M ++Y I P +HY CMID+L +G
Sbjct: 393 MRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSG 452
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+EAK I MP PD + W +LL +CR HGN+E+ + A +L++++P NP SYVLLS+
Sbjct: 453 LFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSN 512
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IYA+ G+WD V+++R + KG++K PGCS I+ S VH F D P + +IY LE+
Sbjct: 513 IYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVGDKLHPRNREIYGMLEE 572
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
+ + + G+VPD S VL ++E K L HHSEKLAIAFGL+ PG + +VKNLRV
Sbjct: 573 MEALLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRV 632
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C +CH ATK +SKI +REI+ RD RFH F++G CSC DFW
Sbjct: 633 CRNCHEATKLVSKIYKREIIARDRTRFHHFRDGVCSCNDFW 673
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 180/368 (48%), Gaps = 37/368 (10%)
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
+F +++ + + W TM+ G + A+ L+ M GL + +TF +L +C A
Sbjct: 22 VFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKA 81
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA---- 245
EEG+QIH +++ ++ +++V ++L+ MY + ++ A VF + ++VVS+TA
Sbjct: 82 FEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITG 141
Query: 246 ---------------------------MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
M+ GY + G +EA+++F M + + PD+ T+
Sbjct: 142 YASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTM 201
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
+V+S+CA S+E G Q H G S + + NAL+ Y KCG +E + LF ++
Sbjct: 202 VTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSC 261
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH- 397
+D VSW L+ GY E + LF++ML G P++VT++ +L AC+ G ++ GR
Sbjct: 262 KDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWI 321
Query: 398 --YFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCR 455
Y + +K+ P T +ID+ ++ G +E A N M W ++
Sbjct: 322 HVYIDKKLKDVTNAP--SLRTSLIDMYAKCGDIEAAHQVFNSM-LHKSLSSWNAMIFGFA 378
Query: 456 IHGNVEIG 463
+HG G
Sbjct: 379 MHGRANAG 386
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 180/359 (50%), Gaps = 36/359 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VSWN +ISG+A GS +A++++ M+K + T T+L + R V+L
Sbjct: 158 IPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNV-RPDEGTMVTVLSACAQSRSVEL 216
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H I GFGS + + + L+D+Y+K G + A F+ L K++V +NT+I G
Sbjct: 217 GRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGG--- 273
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+T M L +EA+ LF+EM G + + T S+
Sbjct: 274 ---------------------YTHM-------NLYKEALLLFQEMLRSGESPNDVTIVSI 305
Query: 181 LTACGGLLALEEGKQIHAFIIR--NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
L AC L A++ G+ IH +I + D + + ++L+DMY KC I+ A VF +M K
Sbjct: 306 LPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHK 365
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-F 297
++ SW AM+ G+ +G + +F M++NGIEPDD T ++S+C++ L+ G F
Sbjct: 366 SLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIF 425
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFG 355
+ + + ++ G G +++ + M + D V W +L+ + G
Sbjct: 426 KSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHG 484
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 126/256 (49%), Gaps = 33/256 (12%)
Query: 227 YAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCA 286
YA SVF T+ N + W ML GY + A+K++ M G+ P+ +T ++ SCA
Sbjct: 18 YAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCA 77
Query: 287 NLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTA 346
+ EEG Q HG L G + V +L++ Y + G +ED+H++F+ + RD VS+TA
Sbjct: 78 KSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTA 137
Query: 347 L-------------------------------VSGYAKFGKANETIDLFEKMLSHGLKPD 375
L +SGYA+ G E ++LF++M+ ++PD
Sbjct: 138 LITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPD 197
Query: 376 EVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFI 435
E T++ VLSAC+++ VE GR + ++G +ID+ S+ G++E A
Sbjct: 198 EGTMVTVLSACAQSRSVELGRQVHS-WIDDHGFGSNLKIVNALIDLYSKCGQVETACGLF 256
Query: 436 NKMPFPPDAIGWATLL 451
+ D + W TL+
Sbjct: 257 EGLSC-KDVVSWNTLI 271
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 86/198 (43%), Gaps = 15/198 (7%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
SWN +I G A HG N +++ M K+G+ ITF +L S +DLGR I
Sbjct: 369 SWNAMIFGFAMHGRANAGFDLFSRMRKNGI-EPDDITFVGLLSACSHSGKLDLGRHIFKS 427
Query: 68 ILK-FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITGLLRRGLVE 125
+ + + + ++D+ GL +AK +P E + V++ +++ R G +E
Sbjct: 428 MTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLE 487
Query: 126 ESRRLFRGMK--DKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
+ R + + ++ +++ + E + + R + L G M +
Sbjct: 488 LAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRAL-LNGKGMKKVP------- 539
Query: 184 CGGLLALEEGKQIHAFII 201
G ++E ++H FI+
Sbjct: 540 --GCSSIEIDSEVHEFIV 555
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 259/648 (39%), Positives = 394/648 (60%), Gaps = 30/648 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+W L+I+ G +A+ ++ M+ G R T S ++ ++ + L
Sbjct: 231 MPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGY-EPDRFTLSGVISACANMELLLL 289
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H ++ G VG L++MYAK +
Sbjct: 290 GQQLHSQAIRHGLTLDRCVGCCLINMYAKCSV---------------------------- 321
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNG-LEREAIDLFREMRLEGLAMDQFTFGS 179
G + +R++F + D + SWT MITG +Q G + EA+DLFR M L + + FTF S
Sbjct: 322 DGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSS 381
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
L AC L AL G+Q+ ++ V ++L+ MY + I A F + KN
Sbjct: 382 TLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKN 441
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
++S+ ++ Y +N SEEA+++F ++ G+ FT S++S A++ ++ +G Q H
Sbjct: 442 LISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHA 501
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
R + +GL +V NAL++ Y +CGNIE + ++F +M R+ +SWT++++G+AK G A +
Sbjct: 502 RVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQ 561
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
++LF KML G++P+ VT I VLSACS GLV +G +F+ M E+G+ P +HY CM+
Sbjct: 562 ALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMV 621
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
DIL R+G L EA FIN MP+ DA+ W T L +CR+HGN+E+GK AA+ ++E +P++PA
Sbjct: 622 DILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPA 681
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+Y+LLS++YAS KWD VS +R+ M+EK + K+ GCSW++ +++VH F D S P + +
Sbjct: 682 AYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAE 741
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY EL+ L+ K+ K GYVP++ VLHDVE +K K+L HSEK+A+AFGL+ PIR
Sbjct: 742 IYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIR 801
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V KNLR+C DCH+A KYIS T REI+VRDA RFH K+G CSC ++W
Sbjct: 802 VFKNLRICGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 134/459 (29%), Positives = 225/459 (49%), Gaps = 38/459 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +SW+ ++S A++ A+ + M+++G + F+ S+ V +G I
Sbjct: 132 DLISWSAMVSCFANNNMGFRALLTFVDMIENGYYP-NEYCFAAATRACSTAEFVSVGDSI 190
Query: 65 HGHILKFGF-GSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
G ++K G+ S V VG L+DM+ K RG
Sbjct: 191 FGFVVKTGYLQSDVCVGCGLIDMFVK------------------------------GRGD 220
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
+ + ++F M ++++++WT MIT LMQ G EAIDLF EM L G D+FT V++A
Sbjct: 221 LVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISA 280
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK---SIKYAESVFRTMAWKNV 240
C + L G+Q+H+ IR+ + VG L++MY KC S+ A +F + NV
Sbjct: 281 CANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNV 340
Query: 241 VSWTAMLVGYGQN-GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
SWTAM+ GY Q G EEA+ +F M + P+ FT S + +CANLA+L G Q
Sbjct: 341 FSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFT 400
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
++ G S V+N+L++ Y + G I+D+ + F+ + ++ +S+ ++ YAK + E
Sbjct: 401 HAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEE 460
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
++LF ++ G+ T +LS + G + KG ++K G++ +I
Sbjct: 461 ALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKS-GLKLNQSVCNALI 519
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ SR G +E A M + I W ++++ HG
Sbjct: 520 SMYSRCGNIESAFQVFEDME-DRNVISWTSIITGFAKHG 557
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 180/352 (51%), Gaps = 9/352 (2%)
Query: 109 VMYNTMITGLLRRGLVEESRRLFRGM-KDKDSISWTTMITGLMQNGLEREAIDLFREMRL 167
V N++I+ + G E++ +F+ M +D ISW+ M++ N + A+ F +M
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 168 EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCK-SI 225
G +++ F + AC + G I F+++ + + +V VG L+DM+ K + +
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDL 221
Query: 226 KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
A VF M +N V+WT M+ Q G + EA+ +F M +G EPD FTL VIS+C
Sbjct: 222 VSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISAC 281
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKC---GNIEDSHRLFNEMNVRDEV 342
AN+ L G Q H +++ GL V L+ Y KC G++ + ++F+++ +
Sbjct: 282 ANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVF 341
Query: 343 SWTALVSGYA-KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEI 401
SWTA+++GY K G E +DLF M+ + P+ T L AC+ + G F
Sbjct: 342 SWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTH 401
Query: 402 MVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
VK G ++ +I + +R+GR+++A+ + + F + I + T++ +
Sbjct: 402 AVK-LGFSSVNCVANSLISMYARSGRIDDARKAFDIL-FEKNLISYNTVIDA 451
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 161/327 (49%), Gaps = 13/327 (3%)
Query: 150 MQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNV 209
+ NG +AI M +G D T+ L C + + G +H + ++D + +
Sbjct: 42 INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101
Query: 210 FVGSALVDMYCKCKSIKYAESVFRTM-AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR 268
++L+ +Y KC + A S+F+ M + ++++SW+AM+ + N A+ F +M
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG-LISFITVSNALVTFYGKC-GNI 326
NG P+++ + +C+ + G G + TG L S + V L+ + K G++
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDL 221
Query: 327 EDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSAC 386
+ ++F +M R+ V+WT +++ +FG A E IDLF +M+ G +PD TL GV+SAC
Sbjct: 222 VSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISAC 281
Query: 387 SRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA---GRLEEAKSFINKMPFPPD 443
+ L+ G+ ++ +G+ C+I++ ++ G + A+ +++ +
Sbjct: 282 ANMELLLLGQQLHSQAIR-HGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQI-LDHN 339
Query: 444 AIGWATLLSSCRIHGNVEIGKWAAESL 470
W +++ G V+ G + E+L
Sbjct: 340 VFSWTAMIT-----GYVQKGGYDEEAL 361
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 104/253 (41%), Gaps = 14/253 (5%)
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
T L+ NG +A+ +M G PD T + C S + GT H +
Sbjct: 35 TGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQ 94
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEM-NVRDEVSWTALVSGYAKFGKANETID 362
+ L N+L++ Y KCG E + +F M + RD +SW+A+VS +A +
Sbjct: 95 SDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALL 154
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL 422
F M+ +G P+E ACS A V G F +VK ++ +ID+
Sbjct: 155 TFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMF 214
Query: 423 SRA-GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL-----LELDPY 476
+ G L A KMP +A+ W +++ G +A E++ + L Y
Sbjct: 215 VKGRGDLVSAFKVFEKMP-ERNAVTWTLMITRLMQFG------YAGEAIDLFLEMILSGY 267
Query: 477 NPASYVLLSSIYA 489
P + L I A
Sbjct: 268 EPDRFTLSGVISA 280
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 256/682 (37%), Positives = 413/682 (60%), Gaps = 36/682 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSW ++I G G DAVK + M+ +G S+ T + +L ++ +
Sbjct: 307 MPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFAP-SQFTLTNVLSSCAAMEACGV 365
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR++H ++K G S V V + ++ MY K G A+ F+ + +++ +N M++
Sbjct: 366 GRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTH 425
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLF-REMRLEGLAMDQFTFGS 179
+G +E + +F M ++ +SW T+I G QNGL+ A+ F R + + D FT S
Sbjct: 426 QGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTS 485
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI-------------- 225
VL+AC L L+ GKQ+H++I+R + + +AL+ Y K S+
Sbjct: 486 VLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVAD 545
Query: 226 -------------------KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM 266
K A +F M ++V++WTAM+VGY QNG ++EA+++F +M
Sbjct: 546 LNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSM 605
Query: 267 QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
G EP+ TL +V+S+CA+LA L+ G Q H +++ + ++VSNA++T Y + G++
Sbjct: 606 ILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSV 665
Query: 327 EDSHRLFNEMNVRDE-VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+ R+F+++ R E ++WT+++ A+ G + + LFE+M+ G+KPD +T +GVLSA
Sbjct: 666 PLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSA 725
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
C+ AG V+KG+ Y+E M E+GI P HY CM+D+ +RAG L EA FI +MP PD +
Sbjct: 726 CAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTV 785
Query: 446 GWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
W +LL++CR+ N ++ + AA LL +DP+N +Y L+++Y++ G+W+ +++ + +
Sbjct: 786 VWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGAYSALANVYSACGRWNDAARIWKLRK 845
Query: 506 EKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLH 565
+KGV+K+ G SW + +VH+F ADD P D IY + ++ ++ K G+VPD++SVLH
Sbjct: 846 DKGVKKETGFSWTHVRGKVHVFGADDVLHPQRDSIYRKAAEMWEEIKKAGFVPDLNSVLH 905
Query: 566 DVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREI 625
DV+ K ++L+ HSEKLAIAFGL+ P +R++KNLRVC+DCH A K+ISK REI
Sbjct: 906 DVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISKFVDREI 965
Query: 626 LVRDAVRFHLFKNGECSCGDFW 647
+VRDA RFH F++G CSC D+W
Sbjct: 966 IVRDATRFHHFRDGYCSCKDYW 987
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/473 (28%), Positives = 235/473 (49%), Gaps = 80/473 (16%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGL----IYDAKRGFDELP--EKNIVMYNTM 114
GR IH H +K G ++ + L+ YA +G+ +A+ FD++P +N +N++
Sbjct: 228 GRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLFDDIPYARRNAFTWNSL 287
Query: 115 ITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
++ + G + ++ +F M D+D++SWT MI GL ++G +A+ F +M EG A Q
Sbjct: 288 LSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFAPSQ 347
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
FT +VL++C + A G+++H F+++ V V ++++ MY KC + A +VF
Sbjct: 348 FTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVFER 407
Query: 235 M------AW-------------------------KNVVSWTAMLVGYGQNGCSEEAVKIF 263
M +W +++VSW ++ GY QNG A+K F
Sbjct: 408 MQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFF 467
Query: 264 CNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGK 322
M + +EPD FT+ SV+S+CANL L+ G Q H L TG+ + NAL++ Y K
Sbjct: 468 SRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAK 527
Query: 323 CGNIEDSHR---------------------------------LFNEMNVRDEVSWTALVS 349
G++E + R +F+ MN RD ++WTA++
Sbjct: 528 SGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIV 587
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
GY + G+ +E ++LF M+ G +P+ TL VLSAC+ ++ G+ +I K IR
Sbjct: 588 GYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGK---QIHCK--AIR 642
Query: 410 PIHDH----YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ + +I + +R+G + A+ +++ + + I W +++ + HG
Sbjct: 643 SLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHG 695
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 154/334 (46%), Gaps = 41/334 (12%)
Query: 206 KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCN 265
+ N F ++L+ +Y K + A VF M ++ VSWT M+VG ++G +AVK F +
Sbjct: 278 RRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLD 337
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M G P FTL +V+SSCA + + G + H + GL S + V+N+++ YGKCG+
Sbjct: 338 MVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGD 397
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML----------------- 368
E + +F M VR SW +VS Y G+ + +FE M+
Sbjct: 398 AETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQN 457
Query: 369 ---------------SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
+ ++PD T+ VLSAC+ +++ G+ +++ G+
Sbjct: 458 GLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRT-GMPCSSQ 516
Query: 414 HYTCMIDILSRAGRLEEAKSFINKMPFPP-DAIGWATLLSSCRIHGNVEIG--KWAAESL 470
+I +++G +E A+ +++ + I + LL G V++G K A E
Sbjct: 517 IMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLE-----GYVKLGDTKQAREIF 571
Query: 471 LELDPYNPASYVLLSSIYASKGKWDHVSQLRRTM 504
++ + ++ + Y G+ D +L R+M
Sbjct: 572 DIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSM 605
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 259/648 (39%), Positives = 395/648 (60%), Gaps = 30/648 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+W L+I+ G +A+ ++ M+ G R T S ++ ++ + L
Sbjct: 231 MPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGY-EPDRFTLSGVISACANMELLLL 289
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H ++ G VG L++MYAK +
Sbjct: 290 GQQLHSQAIRHGLTLDRCVGCCLINMYAKCSV---------------------------- 321
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNG-LEREAIDLFREMRLEGLAMDQFTFGS 179
G + +R++F + D + SWT MITG +Q G + EA+DLFR M L + + FTF S
Sbjct: 322 DGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSS 381
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
L AC L AL G+Q+ ++ V ++L+ MY + I A F + KN
Sbjct: 382 TLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKN 441
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
++S+ ++ Y +N SEEA+++F ++ G+ FT S++S A++ ++ +G Q H
Sbjct: 442 LISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHA 501
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
R + +GL +V NAL++ Y +CGNIE + ++F +M R+ +SWT++++G+AK G A +
Sbjct: 502 RVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQ 561
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
++LF KML G++P+EVT I VLSACS GLV +G +F+ M E+G+ P +HY C++
Sbjct: 562 ALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIV 621
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
DIL R+G L EA FIN MP+ DA+ W T L +CR+HGN+E+GK AA+ ++E +P++PA
Sbjct: 622 DILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPA 681
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+Y+LLS++YAS KWD VS +R+ M+EK + K+ GCSW++ +++VH F D S P + +
Sbjct: 682 AYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAE 741
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY EL+ L+ K+ K GYVP++ VLHDVE +K K+L HSEK+A+AFGL+ PIR
Sbjct: 742 IYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIR 801
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V KNLR+C DCH+A KYIS T REI+VRDA RFH K+G CSC ++W
Sbjct: 802 VFKNLRICGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/459 (28%), Positives = 224/459 (48%), Gaps = 38/459 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +SW+ ++S A++ A+ + M+++G + F+ S+ V +G I
Sbjct: 132 DLISWSAMVSCFANNNMGFRALLTFVDMIENGYYP-NEYCFAAATRACSTAEFVSVGDSI 190
Query: 65 HGHILKFGF-GSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
G ++K G+ S V VG L+DM+ K RG
Sbjct: 191 FGFVIKTGYLQSDVCVGCGLIDMFVK------------------------------GRGD 220
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
+ + ++F M ++++++WT MIT LMQ G EAIDLF +M G D+FT V++A
Sbjct: 221 LVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISA 280
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK---SIKYAESVFRTMAWKNV 240
C + L G+Q+H+ IR+ + VG L++MY KC S+ A +F + NV
Sbjct: 281 CANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNV 340
Query: 241 VSWTAMLVGYGQN-GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
SWTAM+ GY Q G EEA+ +F M + P+ FT S + +CANLA+L G Q
Sbjct: 341 FSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFT 400
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
++ G S V+N+L++ Y + G I+D+ + F+ + ++ +S+ ++ YAK + E
Sbjct: 401 HAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEE 460
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
++LF ++ G+ T +LS + G + KG ++K G++ +I
Sbjct: 461 ALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKS-GLKLNQSVCNALI 519
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ SR G +E A M + I W ++++ HG
Sbjct: 520 SMYSRCGNIESAFQVFEDME-DRNVISWTSIITGFAKHG 557
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 181/352 (51%), Gaps = 9/352 (2%)
Query: 109 VMYNTMITGLLRRGLVEESRRLFRGM-KDKDSISWTTMITGLMQNGLEREAIDLFREMRL 167
V N++I+ + G E++ +FR M +D ISW+ M++ N + A+ F +M
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 168 EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCK-SI 225
G +++ F + AC + G I F+I+ + + +V VG L+DM+ K + +
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDL 221
Query: 226 KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
A VF M +N V+WT M+ Q G + EA+ +F +M +G EPD FTL VIS+C
Sbjct: 222 VSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISAC 281
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKC---GNIEDSHRLFNEMNVRDEV 342
AN+ L G Q H +++ GL V L+ Y KC G++ + ++F+++ +
Sbjct: 282 ANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVF 341
Query: 343 SWTALVSGYA-KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEI 401
SWTA+++GY K G E +DLF M+ + P+ T L AC+ + G F
Sbjct: 342 SWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTH 401
Query: 402 MVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
VK G ++ +I + +R+GR+++A+ + + F + I + T++ +
Sbjct: 402 AVK-LGFSSVNCVANSLISMYARSGRIDDARKAFDIL-FEKNLISYNTVIDA 451
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 160/327 (48%), Gaps = 13/327 (3%)
Query: 150 MQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNV 209
+ NG +AI M +G D T+ L C + + G +H + ++D + +
Sbjct: 42 INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101
Query: 210 FVGSALVDMYCKCKSIKYAESVFRTM-AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR 268
++L+ +Y KC + A S+FR M + ++++SW+AM+ + N A+ F +M
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG-LISFITVSNALVTFYGKC-GNI 326
NG P+++ + +C+ + G G + TG L S + V L+ + K G++
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDL 221
Query: 327 EDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSAC 386
+ ++F +M R+ V+WT +++ +FG A E IDLF M+ G +PD TL GV+SAC
Sbjct: 222 VSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISAC 281
Query: 387 SRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA---GRLEEAKSFINKMPFPPD 443
+ L+ G+ ++ +G+ C+I++ ++ G + A+ +++ +
Sbjct: 282 ANMELLLLGQQLHSQAIR-HGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQI-LDHN 339
Query: 444 AIGWATLLSSCRIHGNVEIGKWAAESL 470
W +++ G V+ G + E+L
Sbjct: 340 VFSWTAMIT-----GYVQKGGYDEEAL 361
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 3/211 (1%)
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
T L+ NG +A+ +M G PD T + C S + GT H +
Sbjct: 35 TGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQ 94
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEM-NVRDEVSWTALVSGYAKFGKANETID 362
+ L N+L++ Y KCG E + +F M + RD +SW+A+VS +A +
Sbjct: 95 SDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALL 154
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL 422
F M+ +G P+E ACS A V G F ++K ++ +ID+
Sbjct: 155 TFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMF 214
Query: 423 SRA-GRLEEAKSFINKMPFPPDAIGWATLLS 452
+ G L A KMP +A+ W +++
Sbjct: 215 VKGRGDLVSAFKVFEKMP-ERNAVTWTLMIT 244
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 257/642 (40%), Positives = 395/642 (61%), Gaps = 33/642 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW +I+G A + +A+ + M +G ++ S++L +S + G Q+H
Sbjct: 142 VSWTSIITGFAHNSRFQEALSSFCQMRIEG-EIATQFALSSVLQACTSLGAIQFGTQVHC 200
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++K GFG +FVGS L DMY+K G + DA + F+E+P
Sbjct: 201 LVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMP---------------------- 238
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
KD++ WT+MI G ++NG ++A+ + +M + + +DQ S L+AC
Sbjct: 239 ---------CKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSA 289
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA-WKNVVSWTA 245
L A GK +HA I++ + F+G+AL DMY K + A +VF+ + ++VS TA
Sbjct: 290 LKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTA 349
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
++ GY + E+A+ F +++R GIEP++FT S+I +CAN A LE G+Q HG+ +
Sbjct: 350 IIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFN 409
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
VS+ LV YGKCG + S +LF+E+ DE++W LV +++ G I+ F
Sbjct: 410 FKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFN 469
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
M+ GLKP+ VT + +L CS AG+VE G +YF M K YG+ P +HY+C+ID+L RA
Sbjct: 470 GMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRA 529
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
G+L+EA+ FIN MPF P+ GW + L +C+IHG++E K+AA+ L++L+P N ++VLLS
Sbjct: 530 GKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLS 589
Query: 486 SIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELE 545
+IYA + +W+ V LR+ +++ + K PG SW+ +++ H+F +DWS P +IY +L+
Sbjct: 590 NIYAKEKQWEDVQSLRKMIKDGNMNKLPGYSWVDIRNKTHVFGVEDWSHPQKKEIYEKLD 649
Query: 546 KLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
L ++ + GYVP SVL D++ + K K+L++HSE++A+AF LL P G+PI V KNLR
Sbjct: 650 NLLDQIKRIGYVPQTESVLIDMDDNLKEKLLHYHSERIAVAFSLLTCPTGMPIIVKKNLR 709
Query: 606 VCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VCSDCH+A K+ISK+T+R I+VRD RFH F NG CSCGD+W
Sbjct: 710 VCSDCHSALKFISKVTERNIIVRDISRFHHFSNGSCSCGDYW 751
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 200/424 (47%), Gaps = 38/424 (8%)
Query: 49 LIMSSSR-RCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKN 107
LI + +R + ++ G+Q+H +++ G F+ + +++Y+K G + + FD++ ++N
Sbjct: 81 LIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRN 140
Query: 108 IVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL 167
+V SWT++ITG N +EA+ F +MR+
Sbjct: 141 MV-------------------------------SWTSIITGFAHNSRFQEALSSFCQMRI 169
Query: 168 EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY 227
EG QF SVL AC L A++ G Q+H +++ +FVGS L DMY KC +
Sbjct: 170 EGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSD 229
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN 287
A F M K+ V WT+M+ G+ +NG ++A+ + M + + D L S +S+C+
Sbjct: 230 ACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSA 289
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN-EMNVRDEVSWTA 346
L + G H L G + NAL Y K G++ + +F + VS TA
Sbjct: 290 LKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTA 349
Query: 347 LVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY 406
++ GY + + + + F + G++P+E T ++ AC+ +E G +VK +
Sbjct: 350 IIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVK-F 408
Query: 407 GIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWA 466
+ + ++D+ + G + + +++ PD I W TL+ HG +G+ A
Sbjct: 409 NFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIE-NPDEIAWNTLVGVFSQHG---LGRNA 464
Query: 467 AESL 470
E+
Sbjct: 465 IETF 468
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 163/331 (49%), Gaps = 14/331 (4%)
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
L +GKQ+HA +IR N F+ + +++Y KC + Y +F M+ +N+VSWT+++ G
Sbjct: 91 LNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITG 150
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
+ N +EA+ FC M+ G F L SV+ +C +L +++ GTQ H + G
Sbjct: 151 FAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCE 210
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
+ V + L Y KCG + D+ + F EM +D V WT+++ G+ K G + + + KM++
Sbjct: 211 LFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVT 270
Query: 370 HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLE 429
+ D+ L LSACS G+ ++K G + D+ S++G +
Sbjct: 271 DDVFIDQHVLCSTLSACSALKASSFGKSLHATILK-LGFEYETFIGNALTDMYSKSGDMV 329
Query: 430 EAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKW--AAESLLEL-----DPYNPASYV 482
A N D I +L + I G VE+ + A + ++L +P N ++
Sbjct: 330 SAS---NVFQIHSDCISIVSL--TAIIDGYVEMDQIEKALSTFVDLRRRGIEP-NEFTFT 383
Query: 483 LLSSIYASKGKWDHVSQLRRTMREKGVRKDP 513
L A++ K +H SQL + + ++DP
Sbjct: 384 SLIKACANQAKLEHGSQLHGQVVKFNFKRDP 414
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 157/350 (44%), Gaps = 33/350 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V W +I G +G A+ Y M+ D + + ST L S+ +
Sbjct: 237 MPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCST-LSACSALKASSF 295
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +H ILK GF F+G+ L DMY+K G D + N+ ++ +
Sbjct: 296 GKSLHATILKLGFEYETFIGNALTDMYSKSG---------DMVSASNVFQIHSDCISI-- 344
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+S T +I G ++ +A+ F ++R G+ ++FTF S+
Sbjct: 345 -------------------VSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSL 385
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ AC LE G Q+H +++ + K + FV S LVDMY KC ++ +F + +
Sbjct: 386 IKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDE 445
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
++W ++ + Q+G A++ F M G++P+ T +++ C++ +E+G F
Sbjct: 446 IAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSS 505
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV-SWTALV 348
+ G++ + ++ G+ G ++++ N M V W + +
Sbjct: 506 MEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFL 555
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 106/217 (48%), Gaps = 5/217 (2%)
Query: 274 DDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLF 333
D T+ +I + A L +G Q H + G + +SN + Y KCG ++ + +LF
Sbjct: 74 DTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLF 133
Query: 334 NEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVE 393
++M+ R+ VSWT++++G+A + E + F +M G + L VL AC+ G ++
Sbjct: 134 DKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQ 193
Query: 394 KGRHYFEIMVK-EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
G ++VK +G + + D+ S+ G L +A +MP DA+ W +++
Sbjct: 194 FGTQVHCLVVKCGFGCELFVG--SNLTDMYSKCGELSDACKAFEEMP-CKDAVLWTSMID 250
Query: 453 SCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYA 489
+G+ + A ++ D + +VL S++ A
Sbjct: 251 GFVKNGDFKKALTAYMKMVTDDVF-IDQHVLCSTLSA 286
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 266/652 (40%), Positives = 395/652 (60%), Gaps = 43/652 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMS----SSRRCVDL 60
D V WN+++ G+ G +A ++++ + GL FS LI++ + ++L
Sbjct: 248 DVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGL---RPDEFSVQLILNGCLWAGTDDLEL 304
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+HG +K G S V V + LV+MY+K+G Y A+ F+++ +++ +N+MI+ +
Sbjct: 305 GKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQ 364
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
L EES LF IDL EGL D FT S+
Sbjct: 365 SSLEEESVNLF---------------------------IDLLH----EGLKPDHFTLASI 393
Query: 181 L-----TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
ACG L+ L++GKQIHA I+ ++ V S ++DMY KC + A VF +
Sbjct: 394 TLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYI 453
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
+ + V+WT+M+ G NG ++A++I+ M+++ + PD++T ++I + + + +LE+G
Sbjct: 454 SAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGR 513
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
Q H + +S V +LV Y KCGNIED++RLF +MNVR+ W A++ G A+ G
Sbjct: 514 QLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHG 573
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
A E ++LF+ M SHG++PD V+ IG+LSACS AGL + Y M +YGI P +HY
Sbjct: 574 NAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHY 633
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
+C++D L RAG ++EA I MPF A LL +CRI G+VE GK A L L+P
Sbjct: 634 SCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEP 693
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSP 535
++ A+YVLLS+IYA+ +WD V+ R+ M+ K V+KDPG SWI K+ +H+F DD S P
Sbjct: 694 FDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHP 753
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
+D IY ++E++ + + ++GYVPD VL DVE EK + L +HSEKLAIA+GL+ P
Sbjct: 754 QADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPAS 813
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
IRV+KNLRVC DCHNA KYISK+ +REI++RDA RFH F++G CSCGD+W
Sbjct: 814 TTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 865
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/473 (28%), Positives = 235/473 (49%), Gaps = 48/473 (10%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNL----MLKDGLGNLSRITFSTMLIMSSSRRC 57
P D V+WN ++ +A+ ND L +L+ LG+ +R+T + +L + + C
Sbjct: 139 PERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGC 198
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
+ +HG+ +K G VFV LV++Y+K G + DA
Sbjct: 199 LWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDA--------------------- 237
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
R LF M+++D + W M+ G +Q GLE+EA LF E GL D+F+
Sbjct: 238 ----------RLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSV 287
Query: 178 GSVLTAC--GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
+L C G LE GKQ+H +++ +V V ++LV+MY K +A VF M
Sbjct: 288 QLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDM 347
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI-----SSCANLAS 290
+++SW +M+ Q+ EE+V +F ++ G++PD FTL S+ +C L
Sbjct: 348 KHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVL 407
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
L++G Q H ++ G S + V++ ++ Y KCG++ ++ +FN ++ D+V+WT+++SG
Sbjct: 408 LDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISG 467
Query: 351 YAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP 410
G ++ + ++ +M + PDE T ++ A S +E+GR ++K +
Sbjct: 468 CVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIK---LDC 524
Query: 411 IHDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+ D + T ++D+ ++ G +E+A KM A+ W +L HGN E
Sbjct: 525 VSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIAL-WNAMLVGLAQHGNAE 576
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 122/460 (26%), Positives = 217/460 (47%), Gaps = 51/460 (11%)
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
LG+ H I+ G F+ + L+ MY+K G + A++ FD P
Sbjct: 95 LGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTP--------------- 139
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLM-----QNGLEREAIDLFREMRLEGLAMDQ 174
++D ++W ++ +G +E + LFR +R + +
Sbjct: 140 ----------------ERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTR 183
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
T VL C L + +H + I+ + +VFV ALV++Y KC ++ A +F
Sbjct: 184 MTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDW 243
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC--ANLASLE 292
M ++VV W ML GY Q G +EA ++F R+G+ PD+F++ +++ C A LE
Sbjct: 244 MRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLE 303
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
G Q HG ++ +GL S ++V+N+LV Y K G + +FN+M D +SW +++S A
Sbjct: 304 LGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCA 363
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVL-----SACSRAGLVEKGRHYFEIMVKEYG 407
+ E+++LF +L GLKPD TL + AC L+++G+ +K
Sbjct: 364 QSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGF 423
Query: 408 IRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN----VEIG 463
+H + + ++D+ + G + A N + PD + W +++S C +GN + I
Sbjct: 424 DSDLHVN-SGILDMYIKCGDMVNAGIVFNYIS-APDDVAWTSMISGCVDNGNEDQALRIY 481
Query: 464 KWAAESLLELDPYNPASYVLLSSIYAS--KGKWDHVSQLR 501
+S + D Y A+ + SS + +G+ H + ++
Sbjct: 482 HRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIK 521
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 263/651 (40%), Positives = 405/651 (62%), Gaps = 25/651 (3%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN ++SG+A +G V++A +V+N M + + I+++ +L +
Sbjct: 134 MPKKDVVSWNAMLSGYAQNGFVDEAREVFNKM-----PHRNSISWNGLLAAYVHNGRLKE 188
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
R++ + S+ + L+ Y K ++ DA++ FD +P ++++ +NTMI+G +
Sbjct: 189 ARRLFESQSNWELISW----NCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQ 244
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G + +++RLF +D +WT M++G +QNG+ EA F EM ++ ++ ++ ++
Sbjct: 245 VGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVK----NEISYNAM 300
Query: 181 LTACGGLLALEE----GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
L G + ++ G+ A RN + + ++ Y + I A +F M
Sbjct: 301 LA---GYVQYKKMVIAGELFEAMPCRN-----ISSWNTMITGYGQNGGIAQARKLFDMMP 352
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
++ VSW A++ GY QNG EEA+ +F M+R+G + T +S+CA++A+LE G Q
Sbjct: 353 QRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQ 412
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
HG+ + G + V NAL+ Y KCG+ ++++ +F + +D VSW +++GYA+ G
Sbjct: 413 VHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGF 472
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
+ + LFE M G+KPDE+T++GVLSACS +GL+++G YF M ++Y ++P HYT
Sbjct: 473 GRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYT 532
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY 476
CMID+L RAGRLEEA++ + MPF P A W LL + RIHGN E+G+ AAE + +++P
Sbjct: 533 CMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQ 592
Query: 477 NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPY 536
N YVLLS++YA+ G+W V ++R MRE GV+K G SW++ ++++H FS D P
Sbjct: 593 NSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPE 652
Query: 537 SDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGL 596
D+IYA LE+L+ KM +EGYV VLHDVE EK ML +HSEKLA+AFG+L IP G
Sbjct: 653 KDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGR 712
Query: 597 PIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
PIRV+KNLRVC DCHNA K+ISKI R I++RD+ RFH F G CSCGD+W
Sbjct: 713 PIRVMKNLRVCQDCHNAIKHISKIVGRLIILRDSHRFHHFSEGICSCGDYW 763
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 180/423 (42%), Gaps = 76/423 (17%)
Query: 96 AKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLE 155
A R F+ +P ++ V YN MI+G LR +R LF M ++D SW M+TG ++N
Sbjct: 65 ALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRL 124
Query: 156 REAIDLFREM----------RLEGLAMDQF------TFGSVL----TACGGLLA------ 189
EA LF M L G A + F F + + GLLA
Sbjct: 125 GEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNG 184
Query: 190 -LEEGKQIH----------------AFIIRNDHKD-----------NVFVGSALVDMYCK 221
L+E +++ ++ RN D +V + ++ Y +
Sbjct: 185 RLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQ 244
Query: 222 CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
+ A+ +F ++V +WTAM+ GY QNG +EA K F D+ + +
Sbjct: 245 VGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYF----------DEMPVKNE 294
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLI------SFITVSNALVTFYGKCGNIEDSHRLFNE 335
IS A LA G + + ++ G + I+ N ++T YG+ G I + +LF+
Sbjct: 295 ISYNAMLA----GYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDM 350
Query: 336 MNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG 395
M RD VSW A++SGYA+ G E +++F +M G + T LS C+ +E G
Sbjct: 351 MPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELG 410
Query: 396 RHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCR 455
+ +VK G ++ + + G +EA + D + W T+++
Sbjct: 411 KQVHGQVVKA-GFETGCFVGNALLGMYFKCGSTDEANDVFEGIE-EKDVVSWNTMIAGYA 468
Query: 456 IHG 458
HG
Sbjct: 469 RHG 471
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 167/360 (46%), Gaps = 26/360 (7%)
Query: 102 ELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDL 161
+ + +IV +N I+ +R G + + R+F M + S+S+ MI+G ++N A DL
Sbjct: 40 KFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDL 99
Query: 162 FREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK 221
F +M D F++ +LT L E ++ + + D V +A++ Y +
Sbjct: 100 FDKMP----ERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKD----VVSWNAMLSGYAQ 151
Query: 222 CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
+ A VF M +N +SW +L Y NG +EA ++F + + + +G
Sbjct: 152 NGFVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGY 211
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE 341
+ N+ L + Q R V +IS+ N +++ Y + G++ + RLFNE +RD
Sbjct: 212 VKR--NM--LGDARQLFDRMPVRDVISW----NTMISGYAQVGDLSQAKRLFNESPIRDV 263
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEI 401
+WTA+VSGY + G +E F++M +E++ +L+ + + FE
Sbjct: 264 FTWTAMVSGYVQNGMVDEARKYFDEMPV----KNEISYNAMLAGYVQYKKMVIAGELFEA 319
Query: 402 MVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
M R I + MI + G + +A+ + MP D + WA ++S +G+ E
Sbjct: 320 MP----CRNI-SSWNTMITGYGQNGGIAQARKLFDMMP-QRDCVSWAAIISGYAQNGHYE 373
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 169/386 (43%), Gaps = 53/386 (13%)
Query: 135 KDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAMDQFTFGSVLTACGGLLALEEG 193
KD D ++W I+ M+NG A+ +F M R ++ + G + A
Sbjct: 42 KDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNA---------- 91
Query: 194 KQIHAFIIRNDHKD-----NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
F + D D ++F + ++ Y + + + A +F M K+VVSW AML
Sbjct: 92 ----KFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLS 147
Query: 249 GYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
GY QNG +EA ++F M RN I + ++++ + L+E + LI
Sbjct: 148 GYAQNGFVDEAREVFNKMPHRNSI-----SWNGLLAAYVHNGRLKEARRLFESQSNWELI 202
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
S+ N L+ Y K + D+ +LF+ M VRD +SW ++SGYA+ G ++ LF +
Sbjct: 203 SW----NCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNE- 257
Query: 368 LSHGLKP--DEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH--YTCMIDILS 423
P D T ++S + G+V++ R YF+ M P+ + Y M+
Sbjct: 258 -----SPIRDVFTWTAMVSGYVQNGMVDEARKYFDEM-------PVKNEISYNAMLAGYV 305
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY-NPASYV 482
+ ++ A MP + W T+++ +G + A L ++ P + S+
Sbjct: 306 QYKKMVIAGELFEAMPC-RNISSWNTMITGYGQNGGIA----QARKLFDMMPQRDCVSWA 360
Query: 483 LLSSIYASKGKWDHVSQLRRTMREKG 508
+ S YA G ++ + M+ G
Sbjct: 361 AIISGYAQNGHYEEALNMFVEMKRDG 386
>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 260/603 (43%), Positives = 381/603 (63%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
FS +L + V LG+Q+H I G S F+ + L+++Y+K G + A FD +P
Sbjct: 72 FSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMP 131
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
+NI+ N MI L G +E ++ LF M D++ +W M+TGL + + EA+ LF
Sbjct: 132 RRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSR 191
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M D+++ GSVL C L AL G+Q+HA++++ + N+ VG +L MY K S
Sbjct: 192 MNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGS 251
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ E V M ++V+W ++ G Q G E + +C M+ G PD T SVISS
Sbjct: 252 MHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISS 311
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
C+ LA L +G Q H ++ G S ++V ++LV+ Y +CG ++DS + F E RD V W
Sbjct: 312 CSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVVLW 371
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
+++++ Y G+ E I LF +M L +E+T + +L ACS GL +KG F++MVK
Sbjct: 372 SSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDMMVK 431
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
+YG++ HYTC++D+L R+G LEEA++ I MP DAI W TLLS+C+IH N EI +
Sbjct: 432 KYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAEIAR 491
Query: 465 WAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRV 524
A+ +L +DP + ASYVLL++IY+S +W +VS++RR M++K V+K+PG SW++ K++V
Sbjct: 492 RVADEVLRIDPQDSASYVLLANIYSSANRWQNVSEVRRAMKDKMVKKEPGISWVEVKNQV 551
Query: 525 HIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLA 584
H F D P +I LE+L ++ ++GYVPD SSVLHD++ EK ++L HHSEKLA
Sbjct: 552 HQFHMGDECHPKHVEINQYLEELTSEIKRQGYVPDTSSVLHDMDNEEKEQILRHHSEKLA 611
Query: 585 IAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCG 644
IAF L+ P G+PIRV+KNLRVCSDCH A KYIS+I + EI+VRD+ RFH FKNG CSCG
Sbjct: 612 IAFALMNTPEGVPIRVMKNLRVCSDCHVAIKYISEIKKLEIIVRDSSRFHHFKNGTCSCG 671
Query: 645 DFW 647
D+W
Sbjct: 672 DYW 674
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 131/292 (44%), Gaps = 39/292 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP V+WN L+SG A G + Y +M G +ITF +++ S +
Sbjct: 262 MPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGF-RPDKITFVSVISSCSELAILCQ 320
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIH +K G S V V S LV MY++ G + D+ + F E E+++V++++MI
Sbjct: 321 GKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVVLWSSMIAAYGF 380
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G E EAI LF EM E L ++ TF S+
Sbjct: 381 HGQGE-------------------------------EAIKLFNEMEQENLPGNEITFLSL 409
Query: 181 LTACGGLLALEEGKQIHAFIIRN-DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK- 238
L AC ++G + +++ K + + LVD+ + ++ AE++ R+M K
Sbjct: 410 LYACSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKA 469
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDD---FTLGSVISSCAN 287
+ + W +L + +E A ++ + R I+P D + L + I S AN
Sbjct: 470 DAIIWKTLLSACKIHKNAEIARRVADEVLR--IDPQDSASYVLLANIYSSAN 519
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 255/641 (39%), Positives = 402/641 (62%), Gaps = 3/641 (0%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN + GHA + A+K+Y M+ GL S +F +L + + + G+QIHGH+
Sbjct: 33 WNTMFRGHALNSDSVTALKLYVCMISLGLLPNS-YSFPFLLKSCAKSKALIEGQQIHGHV 91
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
LK G+ ++V + L+ MYA+ G + DA + FD +++V Y +ITG RG + +R
Sbjct: 92 LKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNAR 151
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
+LF + KD +SW MI+G ++ +EA++L+++M + D+ T +V++AC
Sbjct: 152 KLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSG 211
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
++E G+Q+H++I + N+ + + L+D+Y KC ++ A +F+ +A K+V+SW ++
Sbjct: 212 SIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIG 271
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG--RSLVTGL 306
G+ +EA+ +F M R+G P+D T+ SV+ +CA+L +++ G H + G+
Sbjct: 272 GHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGV 331
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ ++ +L+ Y KCG+IE + ++F+ M R SW A++ G+A GKAN DLF K
Sbjct: 332 TNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSK 391
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M +G+ PD++T +G+LSACS +G+++ GRH F M ++Y I P +HY CMID+L G
Sbjct: 392 MRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCG 451
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+EAK I MP PD + W +LL +C++H NVE+G+ A++L++++P NP SYVLLS+
Sbjct: 452 LFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENPGSYVLLSN 511
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IYA+ G+WD V+++R + +KG++K PGCS I+ S VH F D P + +IY LE+
Sbjct: 512 IYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFIIGDKFHPRNREIYRMLEE 571
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
+ M + G+VPD S VL ++E K L HHSEKLAIAFGL+ PG + +VKNLRV
Sbjct: 572 MEMLMEETGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRV 631
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C +CH ATK ISKI +REI+ RD R HL K+G SC D+W
Sbjct: 632 CRNCHEATKLISKIYKREIIARDRTRLHLLKDGVWSCHDYW 672
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 199/412 (48%), Gaps = 38/412 (9%)
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
+F +++ + + W TM G N A+ L+ M GL + ++F +L +C A
Sbjct: 21 IFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKA 80
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
L EG+QIH +++ + +++V ++L+ MY + ++ A VF + ++VVS+TA++ G
Sbjct: 81 LIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITG 140
Query: 250 YGQNG------------------------------CS-EEAVKIFCNMQRNGIEPDDFTL 278
Y G C+ +EA++++ +M + ++PD+ T+
Sbjct: 141 YASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTM 200
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
+V+S+CA S+E G Q H G S I + N L+ Y KCG +E + LF +
Sbjct: 201 VTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAK 260
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR-- 396
+D +SW L+ G+ E + LF++ML G P++VT++ VL AC+ G ++ GR
Sbjct: 261 KDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWI 320
Query: 397 HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRI 456
H + I + G+ T +ID+ ++ G +E AK + M W ++ +
Sbjct: 321 HVY-INKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSM-LTRSLSSWNAMIFGFAM 378
Query: 457 HG--NVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMRE 506
HG N ++ +DP + ++V L S + G D + R+M +
Sbjct: 379 HGKANAAFDLFSKMRKNGIDP-DDITFVGLLSACSHSGMLDLGRHIFRSMSQ 429
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 192/431 (44%), Gaps = 75/431 (17%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSWN +ISG+ + +A+++Y M+K + T T++ + ++LGRQ+
Sbjct: 161 DVVSWNAMISGYVETCNFKEALELYKDMMKTNV-KPDESTMVTVVSACAQSGSIELGRQL 219
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H I GFGS + + + L+D+Y+K G + A F L +K+++ +NT+I G L
Sbjct: 220 HSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLY 279
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+EA+ LF+EM G + + T SVL AC
Sbjct: 280 -------------------------------KEALLLFQEMLRSGESPNDVTMLSVLPAC 308
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGS----ALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A++ G+ IH +I N V S +L+DMY KC I+ A+ VF +M +++
Sbjct: 309 AHLGAIDIGRWIHVYI--NKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSL 366
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
SW AM+ G+ +G + A +F M++NGI+PDD T ++S+C++ L+ G F
Sbjct: 367 SSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRS 426
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
S + + ++ G CG +++ + M
Sbjct: 427 MSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTM----------------------- 463
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
++PD V +L AC VE G Y + ++K P Y +
Sbjct: 464 -----------PMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENP--GSYVLLS 510
Query: 420 DILSRAGRLEE 430
+I + AGR ++
Sbjct: 511 NIYATAGRWDQ 521
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 150/318 (47%), Gaps = 45/318 (14%)
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ YA S+F T+ N++ W M G+ N S A+K++ M G+ P+ ++ ++ S
Sbjct: 15 LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
CA +L EG Q HG L G + V+ +L++ Y + G +ED+H++F+ + R VS+
Sbjct: 75 CAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSY 134
Query: 345 TALVSGYAKFGKAN-------------------------------ETIDLFEKMLSHGLK 373
TAL++GYA G N E ++L++ M+ +K
Sbjct: 135 TALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVK 194
Query: 374 PDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKS 433
PDE T++ V+SAC+++G +E GR ++++G +ID+ S+ G +E A
Sbjct: 195 PDESTMVTVVSACAQSGSIELGRQ-LHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACG 253
Query: 434 FINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL--DPYNPASYVLLSSIYASK 491
+ D I W TL+ H ++ + K A E+ +P +LS + A
Sbjct: 254 LFQGLA-KKDVISWNTLIGG---HTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACA 309
Query: 492 -------GKWDHVSQLRR 502
G+W HV +R
Sbjct: 310 HLGAIDIGRWIHVYINKR 327
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 269/642 (41%), Positives = 378/642 (58%), Gaps = 32/642 (4%)
Query: 6 GVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIH 65
G SWN +I+G+ H DA++++ M +G+ + T+ +L +S + G+++H
Sbjct: 94 GASWNAMIAGYVEHKHAEDAMRLFREMCHEGV-QPNAGTYMIILKACASLSALKWGKEVH 152
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
I G S V VG+ L+ MY K G I
Sbjct: 153 ACIRHGGLESDVRVGTALLRMYGKCGSI-------------------------------N 181
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
E+RR+F + + D ISWT MI Q+G +EA L +M EG + T+ S+L AC
Sbjct: 182 EARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACA 241
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
AL+ K++H + + +V VG+ALV MY K SI A VF M ++VVSW
Sbjct: 242 SEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNV 301
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
M+ + ++G EA +F MQ G +PD S++++CA+ +LE + H +L +G
Sbjct: 302 MIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSG 361
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
L + V ALV Y K G+I+D+ +F+ M VR+ VSW A++SG A+ G + +++F
Sbjct: 362 LEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFR 421
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
+M +HG+KPD VT + VLSACS AGLV++GR + M + YGI P H CM+D+L RA
Sbjct: 422 RMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRA 481
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
GRL EAK FI+ M PD W LL SCR +GNVE+G+ A+ L+LDP N A+YVLLS
Sbjct: 482 GRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLS 541
Query: 486 SIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELE 545
+IYA GKWD VS +R MRE+G+RK+PG SWI+ +++H F D S P +I +
Sbjct: 542 NIYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKD 601
Query: 546 KLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
K+ K+ EGY+PD VL + + +K + HSEKLAI +GL+ PPG PIRV KNLR
Sbjct: 602 KVIEKIKAEGYIPDTRLVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVFKNLR 661
Query: 606 VCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VC+DCH ATK ISK+ REI+VRDA RFH FK+G CSCGD+W
Sbjct: 662 VCTDCHGATKLISKVEGREIIVRDANRFHHFKDGVCSCGDYW 703
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 113/366 (30%), Positives = 199/366 (54%), Gaps = 26/366 (7%)
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
E+N + N ++ + G ++E+R +F + K SW MI G +++ +A+ LFRE
Sbjct: 60 EQNAHVMNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFRE 119
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M EG+ + T+ +L AC L AL+ GK++HA I + +V VG+AL+ MY KC S
Sbjct: 120 MCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGS 179
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
I A +F + +++SWT M+ Y Q+G +EA ++ M++ G +P+ T S++++
Sbjct: 180 INEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNA 239
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
CA+ +L+ + H +L GL + V ALV Y K G+I+D+ +F+ M VRD VSW
Sbjct: 240 CASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSW 299
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
++ +A+ G+ +E DLF +M + G KPD + + +L+AC+ AG +E
Sbjct: 300 NVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALE----------- 348
Query: 405 EYGIRPIHDHY------------TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
++ IH H T ++ + S++G +++A+ ++M + + W ++S
Sbjct: 349 --WVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKV-RNVVSWNAMIS 405
Query: 453 SCRIHG 458
HG
Sbjct: 406 GLAQHG 411
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 203/414 (49%), Gaps = 48/414 (11%)
Query: 4 HDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQ 63
HD +SW ++I +A G+ +A ++ M ++G + IT+ ++L +S + ++
Sbjct: 193 HDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGF-KPNAITYVSILNACASEGALKWVKR 251
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
+H H L G V VG+ LV MYAK G I DA+ FD + +++V +N MI G
Sbjct: 252 VHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHG- 310
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
RG EA DLF +M+ EG D F S+L A
Sbjct: 311 --------RG----------------------HEAYDLFLQMQTEGCKPDAIMFLSILNA 340
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C ALE K+IH + + + +V VG+ALV MY K SI A VF M +NVVSW
Sbjct: 341 CASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSW 400
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQFHGRSL 302
AM+ G Q+G ++A+++F M +G++PD T +V+S+C++ ++EG +Q+ +
Sbjct: 401 NAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQ 460
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKANETI 361
V G+ ++ N +V G+ G + ++ + M V DE +W AL+ +G +
Sbjct: 461 VYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYG----NV 516
Query: 362 DLFEKMLSHGLKPDE------VTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
+L E + LK D V L + + + +V + M++E GIR
Sbjct: 517 ELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVS----WVRTMMRERGIR 566
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 186/364 (51%), Gaps = 17/364 (4%)
Query: 157 EAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALV 216
EAI + GL D F + VL C L KQ+H II++ + N V + L+
Sbjct: 11 EAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLL 70
Query: 217 DMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDF 276
+Y +C ++ A VF + K+ SW AM+ GY ++ +E+A+++F M G++P+
Sbjct: 71 HVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAG 130
Query: 277 TLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
T ++ +CA+L++L+ G + H GL S + V AL+ YGKCG+I ++ R+F+ +
Sbjct: 131 TYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNL 190
Query: 337 NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVE--- 393
D +SWT ++ YA+ G E L +M G KP+ +T + +L+AC+ G ++
Sbjct: 191 MNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVK 250
Query: 394 -KGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
RH + + E +R T ++ + +++G +++A+ ++M D + W ++
Sbjct: 251 RVHRHALDAGL-ELDVRV----GTALVQMYAKSGSIDDARVVFDRMKV-RDVVSWNVMIG 304
Query: 453 SCRIHGNVEIGKWAAESLLEL--DPYNPASYVLLS--SIYASKGKWDHVSQLRRTMREKG 508
+ HG G A + L++ + P + + LS + AS G + V ++ R + G
Sbjct: 305 AFAEHGR---GHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSG 361
Query: 509 VRKD 512
+ D
Sbjct: 362 LEVD 365
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 161/391 (41%), Gaps = 82/391 (20%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSWN++I A HG ++A ++ M +G I F ++L +S ++
Sbjct: 291 MKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGC-KPDAIMFLSILNACASAGALEW 349
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
++IH H L G V VG+ LV MY+K G I DA+ FD + +N+V +N MI+GL +
Sbjct: 350 VKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQ 409
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G L ++A+++FR M G+ D+ TF +V
Sbjct: 410 HG-------------------------------LGQDALEVFRRMTAHGVKPDRVTFVAV 438
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+AC ++EG+ + + + G +C C
Sbjct: 439 LSACSHAGLVDEGRSQYLAMTQ-------VYGIEPDVSHCNC------------------ 473
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
M+ G+ G EA NM ++PD+ T G+++ SC ++E G
Sbjct: 474 -----MVDLLGRAGRLMEAKLFIDNM---AVDPDEATWGALLGSCRTYGNVELGELVAKE 525
Query: 301 SL---VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV--SWTAL-------- 347
L +++ +SN + GK + + E +R E SW +
Sbjct: 526 RLKLDPKNAATYVLLSN-IYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFL 584
Query: 348 --VSGYAKFGKANETID-LFEKMLSHGLKPD 375
S + + + NE+ D + EK+ + G PD
Sbjct: 585 VADSSHPECKEINESKDKVIEKIKAEGYIPD 615
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 271/649 (41%), Positives = 397/649 (61%), Gaps = 21/649 (3%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLML-KDGLGNLSRITFSTMLIMSSSRRCVD 59
MP D VS+N++IS HA+HG V+ A ++L KD ++++ ML +
Sbjct: 195 MPVKDSVSYNVMISSHANHGLVSLARHYFDLAPEKDA------VSWNGMLAAYVRNGRIQ 248
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
R++ ++ S+ + L+ Y + I +A++ F+++P++++V +NTM++G
Sbjct: 249 EARELFDSRTEWDAISW----NALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYA 304
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
RRG + E+RRLF +D +WT +++G QNG+ EA +F M + + ++ +
Sbjct: 305 RRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDK----NAVSWNA 360
Query: 180 VLTACGGLLALEEGKQI-HAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
++ A +EE K++ A RN V + ++ Y + + A ++F M K
Sbjct: 361 MMAAYVQRRMMEEAKELFDAMPCRN-----VASWNTMLTGYAQAGMLDEARAIFGMMPQK 415
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+ VSW AML Y Q G SEE +++F M R G + V+S+CA++A+LE G Q H
Sbjct: 416 DAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLH 475
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
R + G V NAL+ Y KCG++E++H F EM RD VSW +++GYA+ G
Sbjct: 476 SRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGK 535
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
E +++F+ M KPD++TL+GVL+ACS +GLVEKG YF M +++G+ +HYTCM
Sbjct: 536 EALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCM 595
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
ID+L RAGRL+EA + + MPF PD+ W LL + RIH N E+G+ AAE + EL+P N
Sbjct: 596 IDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENA 655
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
YVLLS+IYAS GKW V ++R M E+GV+K PG SWI+ +++VH FS D P +
Sbjct: 656 GMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPERE 715
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
IYA LE L+ +M K GYV VLHDVE EK ML +HSEKLA+A+G+L IPPG PI
Sbjct: 716 DIYAFLEDLDIRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILKIPPGRPI 775
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RV+KNLRVC DCH A K IS I R I++RD+ RFH F++G CSCGD+W
Sbjct: 776 RVIKNLRVCRDCHTAFKCISAIEGRLIILRDSNRFHHFRDGSCSCGDYW 824
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/468 (24%), Positives = 216/468 (46%), Gaps = 32/468 (6%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P + + N I+ H G V DA +++ M + S T++TML ++ +
Sbjct: 103 PDMEVIRRNRAITAHMRAGRVPDAERLFAAMPRR-----STSTYNTMLAGYAANGRLPQA 157
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
I + SY + L+ + D + FDE+P K+ V YN MI+
Sbjct: 158 LSFFRSIPRPDSFSY----NTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANH 213
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
GLV +R F +KD++SW M+ ++NG +EA +LF + R E D ++ +++
Sbjct: 214 GLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELF-DSRTE---WDAISWNALM 269
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+EE +++ + + D V + +V Y + + A +F ++V
Sbjct: 270 AGYVQRSQIEEAQKMFNKMPQRD----VVSWNTMVSGYARRGDMAEARRLFDVAPIRDVF 325
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
+WTA++ GY QNG EEA ++F M + + + +++++ +EE +
Sbjct: 326 TWTAIVSGYAQNGMLEEAKRVFDAMP----DKNAVSWNAMMAAYVQRRMMEEAKELFDAM 381
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ S+ N ++T Y + G ++++ +F M +D VSW A+++ Y++ G + ET+
Sbjct: 382 PCRNVASW----NTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETL 437
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE-YGIRPIHDHYTCMID 420
LF++M G + VLS C+ +E G ++K YG+ + ++
Sbjct: 438 QLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGN--ALLA 495
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
+ + G +EEA S +M D + W T+++ HG GK A E
Sbjct: 496 MYFKCGSMEEAHSAFEEME-ERDVVSWNTMIAGYARHG---FGKEALE 539
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 270/647 (41%), Positives = 383/647 (59%), Gaps = 33/647 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V WN +ISG+A +G A+++ M ++G IT ++L + + +
Sbjct: 236 MPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEG-KRPDSITIVSILPAVADVGSLRI 294
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR IHG+ ++ GF S+V V + LVDMY+K G + A+ FD + K +V
Sbjct: 295 GRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVV----------- 343
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SW +MI G +QNG A+++F++M E + M T
Sbjct: 344 --------------------SWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGA 383
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L +E+G+ +H + + + +V V ++L+ MY KCK + A +F + K +
Sbjct: 384 LHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTL 443
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW AM++GY QNG EA+ FC MQ I+PD FT+ SVI + A L+ L + HG
Sbjct: 444 VSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGL 503
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ T L + V+ ALV Y KCG + + +LF+ M+ R +W A++ GY G
Sbjct: 504 VIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAA 563
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++LFEKM +KP+EVT + VLSACS +GLVE+G YF M K+YG+ P DHY M+D
Sbjct: 564 LELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVD 623
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RA RL EA FI KMP P + +L +CRIH NVE+G+ AA + +LDP +
Sbjct: 624 LLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGY 683
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
+VLL++IYA+ WD V+++R TM +KG++K PG S ++ ++ VH F + S P + +I
Sbjct: 684 HVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKI 743
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
YA LE L ++ GY+PD +SV HDVE K ++LN HSEKLAIAF LL PG I +
Sbjct: 744 YAFLETLGNRIKAAGYMPDTNSV-HDVEDVVKEQLLNSHSEKLAIAFSLLNTSPGTTIHL 802
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCHNATKYIS +T+REI+VRD RFH FK+G CSCGD+W
Sbjct: 803 RKNLRVCGDCHNATKYISLVTKREIIVRDMRRFHHFKDGTCSCGDYW 849
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 134/469 (28%), Positives = 234/469 (49%), Gaps = 39/469 (8%)
Query: 2 PFHDGVS--WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
P D + ++ ++ G+A + S++DAV + M DG+ + F+ +L + +
Sbjct: 134 PIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVV-YNFTYLLKVCGDNADLR 192
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G++IH ++ GF S VF + +V+MYAK L+ +A + FD +PE+++V +NT
Sbjct: 193 KGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNT------ 246
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+I+G QNG + A++L M+ EG D T S
Sbjct: 247 -------------------------IISGYAQNGFGKTALELVLRMQEEGKRPDSITIVS 281
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L A + +L G+ IH + +R + V V +ALVDMY KC S+ A +F M K
Sbjct: 282 ILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKT 341
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VVSW +M+ GY QNG A++IF M +E + T+ + +CA+L +E+G H
Sbjct: 342 VVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHK 401
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
L S ++V N+L++ Y KC ++ + +F + + VSW A++ GYA+ G+ NE
Sbjct: 402 LLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINE 461
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
ID F KM +KPD T++ V+ A + ++ + + ++++ + + T ++
Sbjct: 462 AIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFV-ATALV 520
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
D+ ++ G + A+ + M W ++ HG +GK A E
Sbjct: 521 DMYAKCGAVHTARKLFDMMD-ERHVTTWNAMIDGYGTHG---LGKAALE 565
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 165/294 (56%), Gaps = 1/294 (0%)
Query: 110 MYNTMITGLL-RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE 168
++ T + L + G + E+ R+F+ ++DK + TM+ G +N +A+ F MR +
Sbjct: 110 LFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYD 169
Query: 169 GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYA 228
G+ + F +L CG L +GK+IH +I N NVF + +V+MY KC+ ++ A
Sbjct: 170 GVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEA 229
Query: 229 ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL 288
+F M +++V W ++ GY QNG + A+++ MQ G PD T+ S++ + A++
Sbjct: 230 YKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADV 289
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
SL G HG S+ G SF+ VS ALV Y KCG++ + +F+ M + VSW +++
Sbjct: 290 GSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMI 349
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
GY + G +++F+KM+ ++ VT++G L AC+ G VE+GR +++
Sbjct: 350 DGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLL 403
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 194 KQIHAFI---IRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGY 250
K++H FI I+N + LV ++CK S+ A VF+ + K + ML GY
Sbjct: 91 KELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGY 150
Query: 251 GQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFI 310
+N ++AV FC M+ +G+ P + ++ C + A L +G + H + +V G S +
Sbjct: 151 ARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNV 210
Query: 311 TVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH 370
+V Y KC +E+++++F+ M RD V W ++SGYA+ G ++L +M
Sbjct: 211 FAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEE 270
Query: 371 GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY----TCMIDILSRAG 426
G +PD +T++ +L A + G + GR + Y +R + + T ++D+ S+ G
Sbjct: 271 GKRPDSITIVSILPAVADVGSLRIGRS-----IHGYSMRAGFESFVNVSTALVDMYSKCG 325
Query: 427 RLEEAKSFINKM 438
+ A+ ++M
Sbjct: 326 SVGTARLIFDRM 337
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 95/204 (46%), Gaps = 9/204 (4%)
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
S++E QF + GL S LV+ + K G++ ++ R+F + + + + ++
Sbjct: 88 TSMKELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTML 147
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH-YFEIMVKEYG 407
GYA+ ++ + F +M G++P +L C + KG+ + +++V +
Sbjct: 148 KGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFA 207
Query: 408 IRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAA 467
T ++++ ++ +EEA ++MP D + W T++S +G GK A
Sbjct: 208 SNVF--AMTGVVNMYAKCRLVEEAYKMFDRMP-ERDLVCWNTIISGYAQNG---FGKTAL 261
Query: 468 ESLLEL--DPYNPASYVLLSSIYA 489
E +L + + P S ++S + A
Sbjct: 262 ELVLRMQEEGKRPDSITIVSILPA 285
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 255/648 (39%), Positives = 385/648 (59%), Gaps = 33/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D V++N L++G++ G +DA+ ++ M G S TF+ +L ++
Sbjct: 200 MAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGF-RPSEFTFAAVLTAGIQMDDIEF 258
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H ++K F VFV + L+D Y+K I
Sbjct: 259 GQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIV-------------------------- 292
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
E+R+LF M + D IS+ +IT NG E+++LFRE++ QF F ++
Sbjct: 293 -----EARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATL 347
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+ L LE G+QIH+ I D V VG++LVDMY KC A +F +A ++
Sbjct: 348 LSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSS 407
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V WTA++ GY Q G E+ +K+F M R I D T S++ +CANLASL G Q H R
Sbjct: 408 VPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSR 467
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ +G +S + +ALV Y KCG+I+++ ++F EM VR+ VSW AL+S YA+ G
Sbjct: 468 IIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHA 527
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ FE+M+ GL+P+ V+ + +L ACS GLVE+G YF M + Y + P +HY M+D
Sbjct: 528 LRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVD 587
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY-NPA 479
+L R+GR +EA+ + +MPF PD I W+++L+SCRIH N E+ AA+ L + + A
Sbjct: 588 MLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAA 647
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
YV +S+IYA+ G+WD V ++++ +RE+G+RK P SW++ K + H+FSA+D S P + +
Sbjct: 648 PYVSMSNIYAAAGEWDSVGKVKKALRERGIRKVPAYSWVEIKQKTHVFSANDTSHPQTKE 707
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
I +L++L ++M ++GY PD + LH+V+ K++ L +HSE++AIAF L+ P G PI
Sbjct: 708 ITRKLDELEKQMEEQGYKPDSTCALHNVDEEVKVESLKYHSERIAIAFALISTPKGSPIL 767
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V+KNLR C+DCH A K ISKI REI VRD+ RFH F +G CSC D+W
Sbjct: 768 VMKNLRACNDCHAAIKVISKIVNREITVRDSSRFHHFTDGSCSCKDYW 815
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 126/453 (27%), Positives = 231/453 (50%), Gaps = 34/453 (7%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V+W +LI G+A H +A ++ M + G+ IT +T+L + V+ Q+HG
Sbjct: 105 VTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVP-DHITLATLLSGFTEFESVNEVAQVHG 163
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
H++K G+ S + V + L+D Y K T GL
Sbjct: 164 HVVKVGYDSTLMVCNSLLDSYCK-----------------------TRSLGL-------- 192
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+ LF+ M +KD++++ ++TG + G +AI+LF +M+ G +FTF +VLTA
Sbjct: 193 ACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQ 252
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+ +E G+Q+H+F+++ + NVFV +AL+D Y K I A +F M + +S+ +
Sbjct: 253 MDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVL 312
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ NG EE++++F +Q + F +++S AN +LE G Q H +++VT
Sbjct: 313 ITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDA 372
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
IS + V N+LV Y KC +++R+F ++ + V WTAL+SGY + G + + LF +
Sbjct: 373 ISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVE 432
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M + D T +L AC+ + G+ +++ + + + ++D+ ++ G
Sbjct: 433 MHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSG-SALVDMYAKCG 491
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
++EA +MP +++ W L+S+ +G+
Sbjct: 492 SIKEALQMFQEMPV-RNSVSWNALISAYAQNGD 523
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 197/391 (50%), Gaps = 2/391 (0%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+ + ++K GF + V + + G + A++ FDE+P KN++ NTMI G L+
Sbjct: 27 QHVDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKS 86
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G + +R LF M + ++WT +I G Q+ EA +LF +M G+ D T ++L
Sbjct: 87 GNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLL 146
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+ ++ E Q+H +++ + + V ++L+D YCK +S+ A +F+ MA K+ V
Sbjct: 147 SGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNV 206
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
++ A+L GY + G + +A+ +F MQ G P +FT +V+++ + +E G Q H
Sbjct: 207 TFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFV 266
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ + + V+NAL+ FY K I ++ +LF EM D +S+ L++ A G+ E++
Sbjct: 267 VKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESL 326
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
+LF ++ + +LS + + +E GR + I + + ++D+
Sbjct: 327 ELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNS-LVDM 385
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
++ + EA + ++ W L+S
Sbjct: 386 YAKCDKFGEANRIFADLAH-QSSVPWTALIS 415
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 253/641 (39%), Positives = 399/641 (62%), Gaps = 3/641 (0%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN + GHA A+K+Y M+ GL S TF +L + + G+QIHGH+
Sbjct: 71 WNTMFRGHALSSDPVSAIKLYVCMISLGLLPNS-YTFPFLLKSCAKLKVSKEGQQIHGHV 129
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
LK G+ ++V + L+ MY K G DA + FD +++V Y +ITG RG +E ++
Sbjct: 130 LKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQ 189
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
++F + KD +SW +I+G G +EA+DLF+EM + D+ T +V++AC
Sbjct: 190 KMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSG 249
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
+++ G+Q+H++I + N+ + +AL+D+Y KC ++ A +F+ ++ K+V+SW M+
Sbjct: 250 SIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIG 309
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG--RSLVTGL 306
GY +EA+ +F M R+G P+D T+ S++ +CA L +++ G H + G+
Sbjct: 310 GYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGV 369
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ ++ +L+ Y KCG+IE +H++FN M+ R + A++ G+A G+AN D+F +
Sbjct: 370 TNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSR 429
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M +G++PD++T +G+LSACS +G+++ GR F M + Y I P +HY CMID+L G
Sbjct: 430 MRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLG 489
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+EA+ IN M PD + W +LL +C++HGNVE+G+ A+ L++++P NP SYVLLS+
Sbjct: 490 LFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSN 549
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IYA+ G+W+ V+ +R + +KG++K PGCS I+ S VH F D P + +IY LE+
Sbjct: 550 IYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEE 609
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
+ + + G+VPD S VL ++E K L HHSEKLAIAFGL+ PG + +VKNLRV
Sbjct: 610 MEVLLEEAGFVPDTSEVLQEMEEEFKQGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRV 669
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C +CH ATK ISKI +REI+ RD RFH F++G CSC D+W
Sbjct: 670 CRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 190/411 (46%), Gaps = 70/411 (17%)
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
+F +++ + + W TM G + AI L+ M GL + +TF +L +C L
Sbjct: 59 VFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKV 118
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
+EG+QIH +++ ++ +++V ++L+ MY K K A VF + ++VVS+TA++ G
Sbjct: 119 SKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITG 178
Query: 250 YGQNGCSE-------------------------------EAVKIFCNMQRNGIEPDDFTL 278
Y G E EA+ +F M + ++PD+ T+
Sbjct: 179 YASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTM 238
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
+V+S+CA S++ G Q H GL S + + NAL+ Y KCG +E + LF ++
Sbjct: 239 VTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSN 298
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH- 397
+D +SW ++ GY E + LF++ML G P++VT++ +L AC++ G ++ GR
Sbjct: 299 KDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWI 358
Query: 398 --YFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP---------------- 439
Y + +K G+ T +ID+ ++ G +E A N M
Sbjct: 359 HVYIDKRIK--GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAM 416
Query: 440 ------------------FPPDAIGWATLLSSCRIHGNVEIGKWAAESLLE 472
PD I + LLS+C G +++G+ S+ +
Sbjct: 417 HGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQ 467
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 193/433 (44%), Gaps = 71/433 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VSWN +ISG+A G+ +A+ ++ M+K + T T++ + + L
Sbjct: 195 IPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNV-KPDESTMVTVVSACAQSGSIQL 253
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H I G GS + + + L+D+Y+K G + A F L K+++ +NTMI G
Sbjct: 254 GRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGG--- 310
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+T + L +EA+ LF+EM G + T S+
Sbjct: 311 ---------------------YTHL-------NLYKEALLLFQEMLRSGENPNDVTMLSI 342
Query: 181 LTACGGLLALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
L AC L A++ G+ IH +I + + + ++L+DMY KC I+ A VF +M +
Sbjct: 343 LPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHR 402
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-F 297
+ + AM+ G+ +G + A IF M++NGIEPDD T ++S+C++ L+ G + F
Sbjct: 403 TLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIF 462
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
+ + + ++ G G +++ + N M
Sbjct: 463 RSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMT-------------------- 502
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
++PD V +L AC G VE G + + ++K P Y
Sbjct: 503 --------------MEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENP--GSYVL 546
Query: 418 MIDILSRAGRLEE 430
+ +I + AGR E
Sbjct: 547 LSNIYATAGRWNE 559
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 168/363 (46%), Gaps = 53/363 (14%)
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYC----KCKSIKYAESVFRT 234
S+L C L +L + IHA +I+ + + S L++ +C + YA SVF T
Sbjct: 7 SLLHNCKTLQSL---RIIHAQMIKTGLHNTNYALSRLLE-FCILSPNFDGLPYAISVFET 62
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
+ N++ W M G+ + A+K++ M G+ P+ +T ++ SCA L +EG
Sbjct: 63 IQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEG 122
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL------- 347
Q HG L G + V +L++ Y K G +D+H++F+ + RD VS+TAL
Sbjct: 123 QQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASR 182
Query: 348 ------------------------VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVL 383
+SGYA G E +DLF++M+ +KPDE T++ V+
Sbjct: 183 GYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVV 242
Query: 384 SACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPD 443
SAC+++G ++ GR + ++G+ +ID+ S+ G +E A + D
Sbjct: 243 SACAQSGSIQLGRQVHS-WIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLS-NKD 300
Query: 444 AIGWATLLSSCRIHGNVEIGKWAAESLLEL--DPYNPASYVLLSSIYASK-------GKW 494
I W T++ + ++ + K A E+ NP +LS + A G+W
Sbjct: 301 VISWNTMIGG---YTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRW 357
Query: 495 DHV 497
HV
Sbjct: 358 IHV 360
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 249/641 (38%), Positives = 404/641 (63%), Gaps = 3/641 (0%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN + GHA A+ +Y M+ GL + TF +L + + G+QIHGH+
Sbjct: 56 WNTMFRGHALSSDPVSALYLYVCMISLGLLP-NCYTFPFLLKSCAKSKAFREGQQIHGHV 114
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
LK G+ ++V + L+ MY + G + DA++ FD+ +++V Y +ITG +G + ++
Sbjct: 115 LKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQ 174
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
++F + KD +SW MI+G + G +EA++LF+EM + D+ T SV++AC
Sbjct: 175 KMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSA 234
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
++E G+Q+H++I + N+ + +AL+D+Y KC ++ A +F +++K+V+SW ++
Sbjct: 235 SIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIG 294
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG--RSLVTGL 306
GY +EA+ +F M R+G P+D T+ S++ +CA+L ++E G H + G+
Sbjct: 295 GYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGV 354
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ + +L+ Y KCG+IE + ++F+ + R SW A++ G+A G+AN D+F +
Sbjct: 355 ANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSR 414
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M + ++PD++T +G+LSACS +G+++ GRH F M ++Y I P +HY CMID+L +G
Sbjct: 415 MRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSG 474
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+EA+ IN M PD + W +LL +C++HGNVE+G+ A++L++++P NP SYVLLS+
Sbjct: 475 LFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSN 534
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IYA+ G+W+ V+++R + +KG++K PGCS I+ S VH F D P + +IY LE+
Sbjct: 535 IYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEE 594
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
+ + + G+VPD S VL ++E K L HHSEKLAIAFGL+ PG + +VKNLRV
Sbjct: 595 MEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRV 654
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C +CH ATK ISKI +REI+ RD RFH F++G CSC D+W
Sbjct: 655 CRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 695
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 202/412 (49%), Gaps = 38/412 (9%)
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
+F +++ + + W TM G + A+ L+ M GL + +TF +L +C A
Sbjct: 44 VFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKA 103
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA---- 245
EG+QIH +++ + +++V ++L+ MY + ++ A VF + ++VVS+TA
Sbjct: 104 FREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITG 163
Query: 246 ---------------------------MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
M+ GY + G ++EA+++F M + + PD+ T+
Sbjct: 164 YASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTM 223
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
SV+S+CA AS+E G Q H G S + + NAL+ Y KCG +E + LF ++
Sbjct: 224 VSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSY 283
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR-- 396
+D +SW L+ GY E + LF++ML G P++VT++ +L AC+ G +E GR
Sbjct: 284 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWI 343
Query: 397 HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRI 456
H + I + G+ H T +ID+ ++ G +E A+ + + W ++ +
Sbjct: 344 HVY-INKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSI-LNRSLSSWNAMIFGFAM 401
Query: 457 HG--NVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMRE 506
HG N ++ E++P + ++V L S + G D + R+M+E
Sbjct: 402 HGRANAAFDIFSRMRKNEIEP-DDITFVGLLSACSHSGMLDLGRHIFRSMKE 452
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 128/437 (29%), Positives = 204/437 (46%), Gaps = 79/437 (18%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSS---RRC 57
+P D VSWN +ISG+A G+ +A++++ M+K + R STM+ + S+
Sbjct: 180 IPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNV----RPDESTMVSVVSACAQSAS 235
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
++LGRQ+H I GFGS + + + L+D+Y K G + A F+ L K+++ +NT+I G
Sbjct: 236 IELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGG 295
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
+T M L +EA+ LF+EM G + + T
Sbjct: 296 ------------------------YTHM-------NLYKEALLLFQEMLRSGESPNDVTM 324
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGS----ALVDMYCKCKSIKYAESVFR 233
S+L AC L A+E G+ IH +I N V S +L+DMY KC I+ A+ VF
Sbjct: 325 LSILPACAHLGAIEIGRWIHVYI--NKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFD 382
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE 293
++ +++ SW AM+ G+ +G + A IF M++N IEPDD T ++S+C++ L+
Sbjct: 383 SILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDL 442
Query: 294 GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK 353
GR + + ++ L YG ++ LF E
Sbjct: 443 -----GRHIFRSMKEDYKITPKL-EHYGCMIDLLGHSGLFKE------------------ 478
Query: 354 FGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
A E I+ E ++PD V +L AC G VE G Y + ++K P
Sbjct: 479 ---AEEMINTME------MEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNP--G 527
Query: 414 HYTCMIDILSRAGRLEE 430
Y + +I + AGR E
Sbjct: 528 SYVLLSNIYATAGRWNE 544
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 139/293 (47%), Gaps = 38/293 (12%)
Query: 194 KQIHAFIIRNDHKDNVFVGSALVDMYCKCKS----IKYAESVFRTMAWKNVVSWTAMLVG 249
+ IHA +I+ + + S L++ +C + YA SVF T+ N++ W M G
Sbjct: 4 RMIHAQMIKTGLHNTNYALSKLIE-FCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRG 62
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
+ + A+ ++ M G+ P+ +T ++ SCA + EG Q HG L G
Sbjct: 63 HALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLD 122
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL---------------------- 347
+ V +L++ Y + G +ED+ ++F++ + RD VS+TAL
Sbjct: 123 LYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPI 182
Query: 348 ---------VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
+SGYA+ G E ++LF++M+ ++PDE T++ V+SAC+++ +E GR
Sbjct: 183 KDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQV 242
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
+ ++G +ID+ + G +E A + + D I W TL+
Sbjct: 243 HS-WIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSY-KDVISWNTLI 293
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 267/697 (38%), Positives = 397/697 (56%), Gaps = 54/697 (7%)
Query: 1 MPFHDGVSWNLLISG----HASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRR 56
M D VS+N +I+ H H ++ V++ L S + + LI
Sbjct: 90 MSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFSSVLGALSLIADEETH 149
Query: 57 CVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLG---------LIYDAKRGFDELP--E 105
C +Q+H + K+G S V + L+ Y L+ A++ FDE P
Sbjct: 150 C----QQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAARKLFDEAPPGR 205
Query: 106 KNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM 165
++ + T+I G +R + +R L GM D +++W MI+G + G EA DL R M
Sbjct: 206 RDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRM 265
Query: 166 RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDN----VFVGSALVDMYCK 221
G+ +D++T+ SV++A G+Q+HA+++R + + + V +AL+ +Y +
Sbjct: 266 HSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTR 325
Query: 222 C-------------------------------KSIKYAESVFRTMAWKNVVSWTAMLVGY 250
C + I+ A S+FR M +++++WT M+ G
Sbjct: 326 CGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGL 385
Query: 251 GQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFI 310
QNG EE +K+F M+ G+EP D+ I+SC+ L SL+ G Q H + + G S +
Sbjct: 386 AQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSL 445
Query: 311 TVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH 370
+V NAL+T Y +CG +E + +F M D VSW A+++ A+ G + I L+EKML
Sbjct: 446 SVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKE 505
Query: 371 GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEE 430
+ PD +T + +LSACS AGLV++GRHYF+ M YGI P DHY+ +ID+L RAG E
Sbjct: 506 DILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSE 565
Query: 431 AKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYAS 490
AK+ MPF P A W LL+ C IHGN+E+G AA+ LLEL P +Y+ LS++YA+
Sbjct: 566 AKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQDGTYISLSNMYAA 625
Query: 491 KGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRK 550
G+WD V+++R+ MRE+GV+K+PGCSWI+ ++ VH+F DD P +Y LE+L +
Sbjct: 626 LGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPEVHAVYRYLEQLVHE 685
Query: 551 MIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDC 610
M K GYVPD VLHD+E +K L+ HSEKLA+ +G++ +P G IRV KNLR+C DC
Sbjct: 686 MRKLGYVPDTKFVLHDMESEQKEYALSTHSEKLAVVYGIMKLPLGATIRVFKNLRICGDC 745
Query: 611 HNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
HNA KYISK+ REI+VRD RFH F+NGECSC ++W
Sbjct: 746 HNAFKYISKVVDREIIVRDRKRFHHFRNGECSCSNYW 782
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 214/481 (44%), Gaps = 84/481 (17%)
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
R +H HIL GF + + + L+D Y K I A+ FD++P+ +IV TM++
Sbjct: 14 FARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYS 73
Query: 120 RRGLVEESRRLFRG--MKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
G ++ + +LF M +D++S+ MIT + A+ LF +M+ G D FTF
Sbjct: 74 AAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTF 133
Query: 178 GSVLTACGGLLALEEG--KQIHAFIIRNDHKDNVFVGSALVDMYCKCKS---------IK 226
SVL A L+A EE +Q+H + + V +AL+ Y C S +
Sbjct: 134 SSVLGAL-SLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMA 192
Query: 227 YAESVFRTM--------AWKNV-------------------------VSWTAMLVGYGQN 253
A +F AW + V+W AM+ GY
Sbjct: 193 AARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHR 252
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG---RSLVTGLISFI 310
G EEA + M GI+ D++T SVIS+ +N G Q H R++V F+
Sbjct: 253 GFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFV 312
Query: 311 -TVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-------------------------- 343
+V+NAL+T Y +CG + ++ R+F++M V+D VS
Sbjct: 313 LSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPV 372
Query: 344 -----WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
WT ++SG A+ G E + LF +M GL+P + G +++CS G ++ G+
Sbjct: 373 RSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQL 432
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
++ + G +I + SR G +E A + MP+ D++ W ++++ HG
Sbjct: 433 HSQII-QLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPY-VDSVSWNAMIAALAQHG 490
Query: 459 N 459
+
Sbjct: 491 H 491
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 17/216 (7%)
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFN--EMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
I + +++ Y GNI+ +H+LFN M++RD VS+ A+++ ++ + + LF +M
Sbjct: 62 IVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQM 121
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD--------HYTCMI 419
G PD T VL A S E V ++G + + +C
Sbjct: 122 KRLGFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCAS 181
Query: 420 DILSRAGRLEEA--KSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLE-LDPY 476
L + L A K F P D W T+++ + ++ AA LLE + +
Sbjct: 182 SPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLV----AARELLEGMTDH 237
Query: 477 NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKD 512
++ + S Y +G ++ L R M G++ D
Sbjct: 238 IAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLD 273
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 266/663 (40%), Positives = 406/663 (61%), Gaps = 17/663 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTML-IMSSSRRCVD 59
+P D SW +LISG A G D + ++ M G+ ++ T S +L SS+
Sbjct: 347 IPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCP-NQFTLSIVLKSCSSNVNDSR 405
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+G+ IHG IL+ G + + ++D Y K A++ F + EK+ V +N M++ L
Sbjct: 406 IGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYL 465
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ G +++S LFR + KD+ SW TMI GLM+NG ER A++L +M G A ++ TF
Sbjct: 466 QIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSI 525
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM---- 235
L L L GKQIH +++ D+ FV ++L+DMYCKC ++ A +F+ +
Sbjct: 526 ALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQES 585
Query: 236 -----------AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
A VSW++M+ GY QNG E+A+K F M + +E D FTL SV+S+
Sbjct: 586 SMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSA 645
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
CA+ LE G Q HG G + + ++++ Y KCG++ D+ +FN+ R+ V W
Sbjct: 646 CASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLW 705
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
T+++SG A G+ E + LFE M++ G+ P+EV+ +GVL+ACS AGL+E+G YF +M +
Sbjct: 706 TSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMRE 765
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
YGIRP +H+TCM+D+ RAGRL E K FI+ + W + LSSCR+H N+E+G
Sbjct: 766 VYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGI 825
Query: 465 WAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRV 524
W + LLEL+P++ Y+L SSI A++ +W+ +++R M+++GV+K+P SWI+ K++V
Sbjct: 826 WVCKKLLELEPFDAGPYILFSSICATEHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQV 885
Query: 525 HIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLA 584
H F D S P +IY+ L++L ++ + GY D++ V+ DVE ++ +L +HSEKLA
Sbjct: 886 HSFVMGDRSHPQDTKIYSYLDELIGRLKEIGYSTDVTPVMQDVEQEQRQVLLGYHSEKLA 945
Query: 585 IAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCG 644
IA+G++ PG PIRV+KNLRVC DCHN KY S++ REI++RD RFH FK+G CSC
Sbjct: 946 IAYGIISTAPGTPIRVMKNLRVCIDCHNFIKYASELLGREIIIRDIHRFHHFKHGHCSCA 1005
Query: 645 DFW 647
D+W
Sbjct: 1006 DYW 1008
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 207/446 (46%), Gaps = 65/446 (14%)
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
+E++ ++F + D SWT +I+G + GL + + LF +M+ +G+ +QFT VL +
Sbjct: 337 LEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKS 396
Query: 184 CGGLLALEE-GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
C + GK IH +I+RN + + ++++D Y KC+ YAE +F MA K+ VS
Sbjct: 397 CSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVS 456
Query: 243 WTAMLVGYGQ-------------------------------NGCSEEAVKIFCNMQRNGI 271
W M+ Y Q NGC A+++ M G
Sbjct: 457 WNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGP 516
Query: 272 EPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHR 331
+ T + ++L+ L G Q H + L G++ V N+L+ Y KCG +E +
Sbjct: 517 AFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASV 576
Query: 332 LFNEM---------------NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDE 376
+F + V + VSW+++VSGY + G+ + + F M+ ++ D+
Sbjct: 577 IFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDK 636
Query: 377 VTLIGVLSACSRAGLVEKGRHYFEIMVK-EYGIRPIHDHYTCMIDILSRAGRLEEAKSFI 435
TL V+SAC+ AG++E GR + K +G+ + +ID+ + G L +A
Sbjct: 637 FTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLG--SSIIDMYVKCGSLNDAWLIF 694
Query: 436 NKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL------DPYNPASYVLLSSIYA 489
N+ + + W +++S C +HG G+ A L EL P N S+V + + +
Sbjct: 695 NQAK-DRNVVLWTSMISGCALHGQ---GREAVR-LFELMINEGITP-NEVSFVGVLTACS 748
Query: 490 SKGKWDHVSQLRRTMRE-KGVRKDPG 514
G + + R MRE G+R PG
Sbjct: 749 HAGLLEEGCKYFRLMREVYGIR--PG 772
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 103/198 (52%), Gaps = 4/198 (2%)
Query: 196 IHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGC 255
+HA +I+N G+ L+++Y K ++++ A +F + +V SWT ++ G+ + G
Sbjct: 310 LHAKLIKNGCVG--IRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGL 367
Query: 256 SEEAVKIFCNMQRNGIEPDDFTLGSVISSC-ANLASLEEGTQFHGRSLVTGLISFITVSN 314
S + + +F MQ G+ P+ FTL V+ SC +N+ G HG L GL ++N
Sbjct: 368 SADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNN 427
Query: 315 ALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKP 374
+++ +Y KC + +LF M +D VSW ++S Y + G +++DLF ++
Sbjct: 428 SILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAAS 487
Query: 375 DEVTLIGVL-SACSRAGL 391
+ G++ + C R L
Sbjct: 488 WNTMIDGLMRNGCERVAL 505
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 255/641 (39%), Positives = 404/641 (63%), Gaps = 3/641 (0%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN + GHA A+K+Y M+ GL S TF +L + + G+QIHGH+
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNS-YTFPFVLKSCAKSKAFKEGQQIHGHV 160
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
LK G ++V + L+ MY + G + DA + FD+ P +++V Y +I G RG +E ++
Sbjct: 161 LKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQ 220
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
+LF + KD +SW MI+G + G +EA++LF++M + D+ T +V++AC
Sbjct: 221 KLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSG 280
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
++E G+Q+H +I + N+ + +AL+D+Y KC ++ A +F + +K+V+SW ++
Sbjct: 281 SIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIG 340
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG--RSLVTGL 306
GY +EA+ +F M R+G P+D T+ S++ +CA+L +++ G H + G+
Sbjct: 341 GYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGV 400
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ ++ +L+ Y KCG+IE +H++FN + + SW A++ G+A G+A+ + DLF +
Sbjct: 401 TNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSR 460
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M G++PD++T +G+LSACS +G+++ GRH F M ++Y + P +HY CMID+L +G
Sbjct: 461 MRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSG 520
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+EA+ IN M PD + W +LL +C++HGNVE+G+ AE+L++++P NP SYVLLS+
Sbjct: 521 LFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSN 580
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IYAS G+W+ V++ R + +KG++K PGCS I+ S VH F D P + +IY LE+
Sbjct: 581 IYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEE 640
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
+ + K G+VPD S VL ++E K L HHSEKLAIAFGL+ PG + +VKNLRV
Sbjct: 641 MEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRV 700
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C +CH ATK ISKI +REI+ RD RFH F++G CSC D+W
Sbjct: 701 CRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 186/402 (46%), Gaps = 68/402 (16%)
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
+F+ +++ + + W TM G + A+ L+ M GL + +TF VL +C A
Sbjct: 90 VFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKA 149
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA---- 245
+EG+QIH +++ +++V ++L+ MY + ++ A VF ++VVS+TA
Sbjct: 150 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKG 209
Query: 246 ---------------------------MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
M+ GY + G +EA+++F +M + + PD+ T+
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
+V+S+CA S+E G Q H G S + + NAL+ Y KCG +E + LF +
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR-- 396
+D +SW L+ GY E + LF++ML G P++VT++ +L AC+ G ++ GR
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389
Query: 397 HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFIN-------------------- 436
H + I + G+ T +ID+ ++ G +E A N
Sbjct: 390 HVY-IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMH 448
Query: 437 --------------KMPFPPDAIGWATLLSSCRIHGNVEIGK 464
K+ PD I + LLS+C G +++G+
Sbjct: 449 GRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGR 490
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 160/299 (53%), Gaps = 40/299 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSS---RRC 57
+P D VSWN +ISG+A G+ +A++++ M+K + R STM+ + S+
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNV----RPDESTMVTVVSACAQSGS 281
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
++LGRQ+H I GFGS + + + L+D+Y+K G + A F+ LP K+++ +NT+I G
Sbjct: 282 IELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGG 341
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
+T M L +EA+ LF+EM G + T
Sbjct: 342 ------------------------YTHM-------NLYKEALLLFQEMLRSGETPNDVTM 370
Query: 178 GSVLTACGGLLALEEGKQIHAFIIR--NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
S+L AC L A++ G+ IH +I + + + ++L+DMY KC I+ A VF ++
Sbjct: 371 LSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 430
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
K++ SW AM+ G+ +G ++ + +F M++ GI+PDD T ++S+C++ L+ G
Sbjct: 431 LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLG 489
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 154/308 (50%), Gaps = 41/308 (13%)
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYC----KCKSIKYAESVFRT 234
S+L C L +L + IHA +I+ + + S L++ +C + + YA SVF+T
Sbjct: 38 SLLHNCKTLQSL---RIIHAQMIKIGLHNTNYALSKLIE-FCILSPHFEGLPYAISVFKT 93
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
+ N++ W M G+ + A+K++ M G+ P+ +T V+ SCA + +EG
Sbjct: 94 IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEG 153
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL------- 347
Q HG L G + V +L++ Y + G +ED+H++F++ RD VS+TAL
Sbjct: 154 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213
Query: 348 ------------------------VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVL 383
+SGYA+ G E ++LF+ M+ ++PDE T++ V+
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273
Query: 384 SACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPD 443
SAC+++G +E GR + + ++G +ID+ S+ G LE A ++P+ D
Sbjct: 274 SACAQSGSIELGRQ-VHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY-KD 331
Query: 444 AIGWATLL 451
I W TL+
Sbjct: 332 VISWNTLI 339
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 7/171 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P+ D +SWN LI G+ +A+ ++ ML+ G + +T ++L + +D+
Sbjct: 327 LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG-ETPNDVTMLSILPACAHLGAIDI 385
Query: 61 GRQIHGHILKF--GFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
GR IH +I K G + + + L+DMYAK G I A + F+ + K++ +N MI G
Sbjct: 386 GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGF 445
Query: 119 LRRGLVEESRRLFRGMK----DKDSISWTTMITGLMQNGLEREAIDLFREM 165
G + S LF M+ D I++ +++ +G+ +FR M
Sbjct: 446 AMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTM 496
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 260/653 (39%), Positives = 393/653 (60%), Gaps = 16/653 (2%)
Query: 3 FHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGR 62
F ++W +I + SHG + ++ + ML GL + F ++L + ++LG
Sbjct: 68 FPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV-FPSVLKSCALLMDLNLGE 126
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRG-------FDELPEKNIVMYNTMI 115
+HG+I++ G ++ G+ L++MY+KL + ++ R FDE+ E+ + +
Sbjct: 127 SLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSV 186
Query: 116 TGLLRRGLVEES-RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
L E+S R++F M +KD +SW T+I G +NGL E + + REM L D
Sbjct: 187 -------LSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDS 239
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
FT SVL + + GK+IH IR +++V S+L+DMY KC + + VF
Sbjct: 240 FTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTL 299
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
+ ++ +SW +++ G QNG +E ++ F M I+P ++ S++ +CA+L +L G
Sbjct: 300 LTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLG 359
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
Q HG G I ++++LV Y KCGNI + ++F+ M +RD VSWTA++ G A
Sbjct: 360 KQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALH 419
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G+A + I+LFE+M + G+KP+ V + VL+ACS GLV++ YF M +++GI P +H
Sbjct: 420 GQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEH 479
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
Y + D+L RAGRLEEA FI M P WATLLS+CR+H N+++ + A +LE+D
Sbjct: 480 YAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRILEVD 539
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS 534
P N +Y+LL++IY++ +W ++ R +MR G+RK P CSWI+ K++V+ F A D S
Sbjct: 540 PNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESH 599
Query: 535 PYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPP 594
P ++I +E L M KEGYVPD S V HDVE +K ++ HSE+LAI FG++ P
Sbjct: 600 PCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPA 659
Query: 595 GLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G+ IRV KNLRVC+DCH ATK+ISKI REI+VRD RFH FKNG CSCGD+W
Sbjct: 660 GMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 712
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 204/398 (51%), Gaps = 48/398 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLS--RITFSTMLIMSSSRRCV 58
MP D VSWN +I+G+A +G + +++ M G NL T S++L + + +
Sbjct: 199 MPEKDLVSWNTIIAGNARNGLYEETLRMIREM---GGANLKPDSFTLSSVLPLIAENVDI 255
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G++IHG ++ G + ++V S L+DMYAK + D+ R F L E++ + +N++I G
Sbjct: 256 SRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGC 315
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
++ GL +E R FR+M + + ++F
Sbjct: 316 VQNGLFDEGLR-------------------------------FFRQMLMAKIKPKSYSFS 344
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
S++ AC L L GKQ+H +I RN +N+F+ S+LVDMY KC +I+ A+ +F M +
Sbjct: 345 SIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLR 404
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-F 297
++VSWTAM++G +G + +A+++F M+ GI+P+ +V+++C++ ++E + F
Sbjct: 405 DMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYF 464
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGK 356
+ + G+ + A+ G+ G +E+++ M++ S W L+S +
Sbjct: 465 NSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSA----CR 520
Query: 357 ANETIDLFEKMLSHGLKPDE------VTLIGVLSACSR 388
+ ID+ EK+ + L+ D + L + SA R
Sbjct: 521 VHXNIDMAEKVANRILEVDPNNTGAYILLANIYSAARR 558
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 175/370 (47%), Gaps = 34/370 (9%)
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
L+ +S RLF + +++W ++I +GL +++ F M GL D F SVL
Sbjct: 55 LLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLK 114
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYA-------------- 228
+C L+ L G+ +H +IIR +++ G+AL++MY K + ++ +
Sbjct: 115 SCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEM 174
Query: 229 ------------------ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
+F M K++VSW ++ G +NG EE +++ M
Sbjct: 175 TERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGAN 234
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
++PD FTL SV+ A + G + HG S+ GL + I V+++L+ Y KC + DS
Sbjct: 235 LKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSC 294
Query: 331 RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
R+F + RD +SW ++++G + G +E + F +ML +KP + ++ AC+
Sbjct: 295 RVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLT 354
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATL 450
+ G+ + + G + ++D+ ++ G + AK ++M D + W +
Sbjct: 355 TLHLGKQLHGYITRN-GFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRL-RDMVSWTAM 412
Query: 451 LSSCRIHGNV 460
+ C +HG
Sbjct: 413 IMGCALHGQA 422
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 121/283 (42%), Gaps = 35/283 (12%)
Query: 231 VFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS 290
+F T+ + ++W +++ Y +G +++ F M +G+ PD SV+ SCA L
Sbjct: 62 LFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMD 121
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHR-------LFNEMNVR---- 339
L G HG + GL + NAL+ Y K +E+S R +F+EM R
Sbjct: 122 LNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSV 181
Query: 340 ---------------------DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVT 378
D VSW +++G A+ G ET+ + +M LKPD T
Sbjct: 182 RTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFT 241
Query: 379 LIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
L VL + + +G+ +++ G+ + +ID+ ++ R+ ++ +
Sbjct: 242 LSSVLPLIAENVDISRGKEIHGCSIRQ-GLDADIYVASSLIDMYAKCTRVADSCRVFTLL 300
Query: 439 PFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
D I W ++++ C +G + G +L + P SY
Sbjct: 301 T-ERDGISWNSIIAGCVQNGLFDEGLRFFRQML-MAKIKPKSY 341
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 252/643 (39%), Positives = 407/643 (63%), Gaps = 7/643 (1%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN + GHA A+K+Y M+ GL S TF +L + G+Q+HG +
Sbjct: 71 WNTMFRGHALSSDPVSALKLYVCMVSLGLLPNS-YTFPFLLKSCAKSXAFKEGQQLHGQV 129
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
LKFGF +++ + L+ MY + G + DA++ D+ +++V Y +ITG RG +E +
Sbjct: 130 LKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAH 189
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
++F + KD +SW I+G + G +EA++LF++M + D+ T +VL+AC
Sbjct: 190 KMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSG 249
Query: 189 ALEEGKQIHAFIIRNDHK--DNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
++E G+Q+H++I NDH N+ + +AL+D+Y KC ++ A +F+ ++ K+V+SW +
Sbjct: 250 SIELGRQVHSWI--NDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTL 307
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG--RSLVT 304
+ GY +EA+ +F +M R+G +P+D T+ S++S+CA+L +++ G H +
Sbjct: 308 IGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLK 367
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G+ + ++ +L+ Y KCG+IE + ++F+ M R SW A++ G+A G+AN D+F
Sbjct: 368 GVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIF 427
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+M +G++PD++T +G+LSACS +G+++ GRH F M ++Y + P +HY CMID+
Sbjct: 428 SRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGH 487
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
+G +EA+ IN M PD + W +LL +C++HGNVE+G+ A++L++++P NP SYVLL
Sbjct: 488 SGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLL 547
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S+IYA+ +W+ V++ R + +KG++K PGCS I+ S VH F D P + +IY L
Sbjct: 548 SNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 607
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
E++ + + G+VPD S VL ++E K L HHSEKLAIAFGL+ PG + +VKNL
Sbjct: 608 EEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNL 667
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RVC +CH ATK ISKI +REI+ RD RFH F++GECSC D+W
Sbjct: 668 RVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGECSCNDYW 710
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 198/433 (45%), Gaps = 71/433 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VSWN ISG+A G+ +A++++ M+K + T T+L + ++L
Sbjct: 195 IPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNV-RPDESTMVTVLSACAQSGSIEL 253
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H I GFG + + + L+D+Y+K G + A F L K+++ +NT+I G
Sbjct: 254 GRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGG--- 310
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+T M L +EA+ LF++M G + T S+
Sbjct: 311 ---------------------YTHM-------NLYKEALLLFQDMLRSGEKPNDVTMLSI 342
Query: 181 LTACGGLLALEEGKQIHAFIIR--NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
L+AC L A++ G+ IH +I + + + ++L+DMY KC I+ A+ VF +M +
Sbjct: 343 LSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNR 402
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-F 297
++ SW AM+ G+ +G + A IF M++NGIEPDD T ++S+C++ L+ G F
Sbjct: 403 SLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIF 462
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
+ L+ + ++ G G +++ ++ N M
Sbjct: 463 RSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTME-------------------- 502
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
++PD V +L AC G VE G Y + ++K P Y
Sbjct: 503 --------------MEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENP--GSYVL 546
Query: 418 MIDILSRAGRLEE 430
+ +I + A R E
Sbjct: 547 LSNIYATAERWNE 559
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 198/435 (45%), Gaps = 73/435 (16%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKL----GLIYDAKRGFDELPEKNIVMYNTMITG 117
R IH ++K G + + S L++ GL Y A FD + E ++++NTM
Sbjct: 19 RIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPY-AISVFDTIQEPXLLIWNTM--- 74
Query: 118 LLRRGLVEESRRLFRGMK-DKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
FRG D +S A+ L+ M GL + +T
Sbjct: 75 -------------FRGHALSSDPVS----------------ALKLYVCMVSLGLLPNSYT 105
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV----- 231
F +L +C A +EG+Q+H +++ ++++ ++L+ MY + ++ A+ V
Sbjct: 106 FPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSS 165
Query: 232 --------------------------FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCN 265
F + K+VVSW A + GY + G +EA+++F
Sbjct: 166 HRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKK 225
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M + + PD+ T+ +V+S+CA S+E G Q H G + + NAL+ Y KCG
Sbjct: 226 MMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGE 285
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+E + LF ++ +D +SW L+ GY E + LF+ ML G KP++VT++ +LSA
Sbjct: 286 LETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSA 345
Query: 386 CSRAGLVEKGR--HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPD 443
C+ G ++ GR H + I + G+ T +ID+ ++ G +E A+ + M
Sbjct: 346 CAHLGAIDIGRWIHVY-IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSM-LNRS 403
Query: 444 AIGWATLLSSCRIHG 458
W ++ +HG
Sbjct: 404 LSSWNAMIFGFAMHG 418
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 147/307 (47%), Gaps = 39/307 (12%)
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVD---MYCKCKSIKYAESVFRTM 235
S+L C L +L + IHA +I+ + + S L++ + + YA SVF T+
Sbjct: 7 SLLHXCKTLQSL---RIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTI 63
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
++ W M G+ + A+K++ M G+ P+ +T ++ SCA + +EG
Sbjct: 64 QEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQ 123
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL-------- 347
Q HG+ L G + + +L++ Y + G +ED+ ++ ++ + RD VS+TAL
Sbjct: 124 QLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRG 183
Query: 348 -----------------------VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
+SGYA+ G E ++LF+KM+ ++PDE T++ VLS
Sbjct: 184 XIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLS 243
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDA 444
AC+++G +E GR + ++G +ID+ S+ G LE A + D
Sbjct: 244 ACAQSGSIELGRQVHS-WINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLS-NKDV 301
Query: 445 IGWATLL 451
I W TL+
Sbjct: 302 ISWNTLI 308
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 256/651 (39%), Positives = 402/651 (61%), Gaps = 16/651 (2%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL-----G 61
VSW LI+G +G +A+ V+ M+ +G + +++ I S+ C +L G
Sbjct: 328 VSWTALIAGSEQNGYDFEALSVFRKMVLEG------VKPNSITIASAVSACTNLSLLRHG 381
Query: 62 RQIHGHILKFG-FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
R+IHG+ +K S + VG+ LVD YAK + A+R F + + ++V +N M+ G
Sbjct: 382 REIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYAL 441
Query: 121 RGLVEESRRLFRGMK----DKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
RG EE+ L MK + D I+W ++TG Q G + A++ F+ M G+ + T
Sbjct: 442 RGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTT 501
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
L ACG + L+ GK+IH +++RN + + VGSAL+ MY C S++ A SVF ++
Sbjct: 502 ISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELS 561
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
++VV W +++ Q+G S A+ + M + +E + T+ S + +C+ LA+L +G +
Sbjct: 562 TRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKE 621
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H + GL + + N+L+ YG+CG+I+ S R+F+ M RD VSW ++S Y G
Sbjct: 622 IHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGF 681
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
+ ++LF++ + GLKP+ +T +LSACS +GL+E+G YF++M EY + P + Y
Sbjct: 682 GMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYA 741
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY 476
CM+D+LSRAG+ E FI KMPF P+A W +LL +CRIH N ++ ++AA L EL+P
Sbjct: 742 CMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQ 801
Query: 477 NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPY 536
+ +YVL+++IY++ G+W+ +++R M+E+GV K PGCSWI+ K ++H F D S P
Sbjct: 802 SSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPL 861
Query: 537 SDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGL 596
+QI A++E L + + GYVPD + VL DV+ EK L HSEK+A+AFGL+ G
Sbjct: 862 MEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGT 921
Query: 597 PIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
P+R++KNLRVC DCH+ATK+ISK+ +R+I++RD RFH F +G CSCGD+W
Sbjct: 922 PLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 972
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 179/396 (45%), Gaps = 63/396 (15%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
SW ++ + G + +K++ LM+ +G+ F + S + +G+ ++ +
Sbjct: 157 SWTAIMEMYCGLGDYEETIKLFYLMVNEGV-RPDHFVFPKVFKACSELKNYRVGKDVYDY 215
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
+L GF V ++DM+ K G + + +
Sbjct: 216 MLSIGFEGNSCVKGSILDMFIKCGRM-------------------------------DIA 244
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
RR F ++ KD W M++G G ++A+ +M+L G+ DQ T+ ++++
Sbjct: 245 RRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQS 304
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
EE + F+ KD F+ NVVSWTA++
Sbjct: 305 GQFEEASKY--FLEMGGLKD------------------------FK----PNVVSWTALI 334
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL-VTGL 306
G QNG EA+ +F M G++P+ T+ S +S+C NL+ L G + HG + V L
Sbjct: 335 AGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEEL 394
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
S + V N+LV +Y KC ++E + R F + D VSW A+++GYA G E I+L +
Sbjct: 395 DSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSE 454
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
M G++PD +T G+++ ++ G + +F+ M
Sbjct: 455 MKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRM 490
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 190/443 (42%), Gaps = 98/443 (22%)
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
LG Q+H ++ G F+GS L+++Y +
Sbjct: 107 LGFQVHAQLVVNGVDVCEFLGSRLLEVYCQ------------------------------ 136
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
G VE++RR+F M +++ SWT ++ G E I LF M EG+ D F F
Sbjct: 137 -TGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPK 195
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
V AC L GK ++ +++ + N V +++DM+ KC + A F + +K+
Sbjct: 196 VFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKD 255
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
V W M+ GY G ++A+K +M+ +G++PD T ++IS A EE ++
Sbjct: 256 VFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASK--- 312
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
++ + G ++D + NV VSWTAL++G + G E
Sbjct: 313 -------------------YFLEMGGLKDF-----KPNV---VSWTALIAGSEQNGYDFE 345
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH---------------------- 397
+ +F KM+ G+KP+ +T+ +SAC+ L+ GR
Sbjct: 346 ALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLV 405
Query: 398 -YF------EIMVKEYGIRPIHD--HYTCMIDILSRAGRLEEAKSFINKMPFP---PDAI 445
Y+ E+ +++G+ D + M+ + G EEA +++M F PD I
Sbjct: 406 DYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDII 465
Query: 446 GWATLLSSCRIHGNVEIGKWAAE 468
W L++ +G+ GK A E
Sbjct: 466 TWNGLVTGFTQYGD---GKAALE 485
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 145/307 (47%), Gaps = 3/307 (0%)
Query: 151 QNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVF 210
+NG+ A L M L + S+L C L L G Q+HA ++ N F
Sbjct: 66 RNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEF 125
Query: 211 VGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
+GS L+++YC+ ++ A +F M+ +NV SWTA++ Y G EE +K+F M G
Sbjct: 126 LGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEG 185
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
+ PD F V +C+ L + G + L G V +++ + KCG ++ +
Sbjct: 186 VRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIAR 245
Query: 331 RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
R F E+ +D W +VSGY G+ + + M G+KPD+VT ++S +++G
Sbjct: 246 RFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSG 305
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF---PPDAIGW 447
E+ YF M +P +T +I + G EA S KM P++I
Sbjct: 306 QFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITI 365
Query: 448 ATLLSSC 454
A+ +S+C
Sbjct: 366 ASAVSAC 372
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 98/233 (42%), Gaps = 18/233 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN++IS + HG DAV ++ GL + ITF+ +L S ++
Sbjct: 661 MPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGL-KPNHITFTNLLSACSHSGLIEE 719
Query: 61 GRQIHGHI-LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITGL 118
G + + ++ V + +VD+ ++ G + +++P E N ++ +++
Sbjct: 720 GWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGAC 779
Query: 119 ---LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
L E + R ++ + S ++ M G +A + M+ G
Sbjct: 780 RIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERG------ 833
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRN-DHKDNVFVGSALVDMYCKCKSIKY 227
+T G +E +++H+F++ + H + + + +Y K I Y
Sbjct: 834 -----VTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGY 881
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 266/663 (40%), Positives = 403/663 (60%), Gaps = 21/663 (3%)
Query: 4 HDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQ 63
D VSWN ++S + N A+ +++ M L + I+ +L +S GRQ
Sbjct: 326 QDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQ 385
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
+HG ++ G VFVG+ +VDMYAK G + +A + F + K++V +N M+TG + G
Sbjct: 386 VHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGR 445
Query: 124 VEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+E + LF M ++ D ++WT +ITG Q G EA+D+FR+M G + T S
Sbjct: 446 LEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVS 505
Query: 180 VLTACGGLLALEEGKQIHAFIIR--------NDHKDNVFVGSALVDMYCKCKSIKYAESV 231
+L+AC + AL GK+ H + I+ + D++ V + L+DMY KC+S + A +
Sbjct: 506 LLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKM 565
Query: 232 FRTMAWKN--VVSWTAMLVGYGQNGCSEEAVKIFCNMQR--NGIEPDDFTLGSVISSCAN 287
F +++ K+ VV+WT M+ GY Q+G + A+++F M + I+P+DFTL + +CA
Sbjct: 566 FDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACAR 625
Query: 288 LASLEEGTQFHG---RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
LA+L G Q H R+ ++ F V+N L+ Y K G+++ + +F+ M R+ VSW
Sbjct: 626 LAALRFGRQVHAYVLRNFYGSVMLF--VANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSW 683
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
T+L++GY G+ + + +F++M L PD +T + VL ACS +G+V+ G ++F M K
Sbjct: 684 TSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSK 743
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
++G+ P +HY CM+D+ RAGRL EA IN+MP P + W LLS+CR+H NVE+G+
Sbjct: 744 DFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGE 803
Query: 465 WAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRV 524
+AA LLEL+ N SY LLS+IYA+ +W V+++R TM+ G++K PGCSWI+ + V
Sbjct: 804 FAANRLLELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGV 863
Query: 525 HIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLA 584
F D S P S QIY L L +++ GYVP S LHDV+ EK +L HSEKLA
Sbjct: 864 ATFYVGDRSHPQSQQIYETLADLIQRIKAIGYVPQTSFALHDVDDEEKGDLLFEHSEKLA 923
Query: 585 IAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCG 644
+A+G+L + P PIR+ KNLR+C DCH+A YISKI + EI++RD+ RFH FKNG CSC
Sbjct: 924 LAYGILTLHPRAPIRITKNLRICGDCHSAITYISKIIEHEIILRDSSRFHHFKNGSCSCK 983
Query: 645 DFW 647
+W
Sbjct: 984 GYW 986
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 155/557 (27%), Positives = 252/557 (45%), Gaps = 84/557 (15%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN LI GS D +Y M G TF + ++ + LG +H +
Sbjct: 227 WNQLIRRALHLGSPRDVFTLYRQMKSLGW-TPDHYTFPFVFKACANLSSLSLGASLHATV 285
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+ GF S VFV + +V MY K G + A FD+L + I
Sbjct: 286 SRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGI-------------------- 325
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL-AMDQFTFGSVLTACGGL 187
+D +SW ++++ M A+ LF +M L + D + ++L AC L
Sbjct: 326 --------QDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASL 377
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
A G+Q+H F IR+ D+VFVG+A+VDMY KC ++ A VF+ M +K+VVSW AM+
Sbjct: 378 AASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMV 437
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIE----------------------------------- 272
GY Q G E A+ +F M IE
Sbjct: 438 TGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSR 497
Query: 273 PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL--------ISFITVSNALVTFYGKCG 324
P+ TL S++S+C ++ +L G + H ++ L + V N L+ Y KC
Sbjct: 498 PNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQ 557
Query: 325 NIEDSHRLFNEMNV--RDEVSWTALVSGYAKFGKANETIDLFEKM--LSHGLKPDEVTLI 380
+ E + ++F+ ++ RD V+WT ++ GYA+ G AN + LF M + +KP++ TL
Sbjct: 558 STEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLS 617
Query: 381 GVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF 440
L AC+R + GR +++ + + C+ID+ S++G ++ A+ + MP
Sbjct: 618 CALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMP- 676
Query: 441 PPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYAS--KGKWDH-V 497
+A+ W +L++ +HG E + + ++ P P L +YA G DH +
Sbjct: 677 QRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKV-PLVPDGITFLVVLYACSHSGMVDHGI 735
Query: 498 SQLRRTMREKGVRKDPG 514
+ R ++ GV DPG
Sbjct: 736 NFFNRMSKDFGV--DPG 750
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 172/365 (47%), Gaps = 34/365 (9%)
Query: 170 LAMDQFTFGSVLT-ACGGLLALEEGKQI-HAFIIRNDHKDNVFVG------SALVDMYCK 221
L QFT +L+ A + AL+E + HA ++ H+ ++ G + L+ Y
Sbjct: 147 LLQSQFTNTRLLSCATIPITALKECNSLAHAKLL---HQQSIMQGLLFHLATNLIGTYIA 203
Query: 222 CKSIKYAESVFRTM--AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLG 279
S YA + + + +V W ++ G + ++ M+ G PD +T
Sbjct: 204 SNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFP 263
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM--- 336
V +CANL+SL G H +G S + V NA+V+ YGKCG + +H +F+++
Sbjct: 264 FVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHR 323
Query: 337 NVRDEVSWTALVSGYAKFGKANETIDLFEKMLS-HGLKPDEVTLIGVLSACSRAGLVEKG 395
++D VSW ++VS Y AN + LF KM + H + PD ++L+ +L AC+ +G
Sbjct: 324 GIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRG 383
Query: 396 RHYFEIMVKEYGIRP--IHDHYT--CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
R V + IR + D + ++D+ ++ G++EEA +M F D + W ++
Sbjct: 384 RQ-----VHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKF-KDVVSWNAMV 437
Query: 452 SSCRIHGNVE----IGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREK 507
+ G +E + + E +ELD ++ + + YA +G+ + R M +
Sbjct: 438 TGYSQAGRLEHALSLFERMTEENIELD---VVTWTAVITGYAQRGQGCEALDVFRQMCDC 494
Query: 508 GVRKD 512
G R +
Sbjct: 495 GSRPN 499
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW L++G+ HG DA++V++ M K L ITF +L S VD
Sbjct: 675 MPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVP-DGITFLVVLYACSHSGMVDH 733
Query: 61 GRQIHGHILK-FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITG 117
G + K FG + +VD++ + G + +A + +E+P E V++ +++
Sbjct: 734 GINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSA 792
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 261/687 (37%), Positives = 395/687 (57%), Gaps = 48/687 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMS------SSRRCV 58
D V N +IS +A AV V+ +L G +F+ +L S R C
Sbjct: 120 DTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHCA 179
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLG---LIYDAKRGFDELPEKNIVMYNTMI 115
Q+H +LK G G + V + LV +Y K DA++ DE+P K+ + + TM+
Sbjct: 180 ----QLHCSVLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMV 235
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
G +RRG V +R +F + K + W MI+G + +G+ EA +LFR M LE + +D+F
Sbjct: 236 VGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEF 295
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDH----KDNVFVGSALVDMYCKCKSIKYAESV 231
TF SVL+AC + GK +H IIR + + V +ALV Y KC +I A +
Sbjct: 296 TFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRI 355
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGC-------------------------------SEEAV 260
F M K+VVSW +L GY ++ C +E+A+
Sbjct: 356 FDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDAL 415
Query: 261 KIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFY 320
K+F M+ ++P D+T I++C L +L+ G Q HG + G + NAL+T Y
Sbjct: 416 KLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMY 475
Query: 321 GKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLI 380
+CG ++++H +F M D VSW A++S + G E ++LF++M++ G+ PD ++ +
Sbjct: 476 ARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFL 535
Query: 381 GVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF 440
VL+AC+ +GLV++G YFE M +++GI P DHYT +ID+L RAGR+ EA+ I MPF
Sbjct: 536 TVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPF 595
Query: 441 PPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQL 500
P W +LS CR G++E+G AA+ L ++ P + +Y+LLS+ Y++ G W +++
Sbjct: 596 EPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARV 655
Query: 501 RRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDM 560
R+ MR++GV+K+PGCSWI+ ++VH+F D P + ++Y LE + KM K GYVPD
Sbjct: 656 RKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGAKMRKLGYVPDT 715
Query: 561 SSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKI 620
VLHD+E +K +L HSE+LA+ FGLL +PPG + V+KNLR+C DCH A ++SK
Sbjct: 716 KVVLHDMEPHQKEHILFAHSERLAVGFGLLNLPPGATVTVLKNLRICDDCHAAIMFMSKA 775
Query: 621 TQREILVRDAVRFHLFKNGECSCGDFW 647
REI+VRD RFH FK+GECSCG++W
Sbjct: 776 VGREIVVRDVRRFHHFKDGECSCGNYW 802
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 40/259 (15%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP+ + +SW +++SG+ G DA+K++N M + + T++ + +
Sbjct: 390 MPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCD-YTYAGAIAACGELGALKH 448
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+HGHI++ GF G+ L+ MYA+ G + +A F +P + V +N MI+ L +
Sbjct: 449 GKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQ 508
Query: 121 RGLVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
G E+ LF M + D IS+ T++T +GL E F M+ +
Sbjct: 509 HGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRD-------- 560
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
FG I DH + L+D+ + I A + +TM
Sbjct: 561 FG--------------------IIPGEDHY------TRLIDLLGRAGRIGEARDLIKTMP 594
Query: 237 WKNVVS-WTAMLVGYGQNG 254
++ S W A+L G +G
Sbjct: 595 FEPTPSIWEAILSGCRTSG 613
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN +IS HG +A+++++ M+ +G+ RI+F T+L + VD
Sbjct: 491 MPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGI-YPDRISFLTVLTACNHSGLVDE 549
Query: 61 G-RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITGL 118
G R FG + L+D+ + G I +A+ +P E ++ +++G
Sbjct: 550 GFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGC 609
Query: 119 LRRGLVE----ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
G +E + +LF+ D ++ + G +A + + MR G+ +
Sbjct: 610 RTSGDMELGAHAADQLFKMTPQHDG-TYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEP 668
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFII 201
G +E G ++H F++
Sbjct: 669 -----------GCSWIEAGNKVHVFLV 684
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 262/643 (40%), Positives = 392/643 (60%), Gaps = 5/643 (0%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN LI H+ + ++ +++ ML GL S TF ++ + + +Q+H H
Sbjct: 95 WNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSH-TFPSLFKSCAKSKATHEAKQLHAHA 153
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
LK + V + L+ MY+++G + A+ FD+ ++ V + +ITG + G V+++R
Sbjct: 154 LKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDAR 213
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
RLF + KD +SW MI G +Q+G EA+ F M+ ++ +Q T SVL+ACG L
Sbjct: 214 RLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLR 273
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
+LE GK I +++ N+ + +ALVDMY KC I A +F M K+V+ W M+
Sbjct: 274 SLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIG 333
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG---RSLV-T 304
GY EEA+ +F M R + P+D T +V+ +CA+L +L+ G H ++L T
Sbjct: 334 GYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGT 393
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G ++ +++ +++ Y KCG +E + ++F M R SW A++SG A G A + LF
Sbjct: 394 GNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLF 453
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
E+M++ G +PD++T +GVLSAC++AG VE G YF M K+YGI P HY CMID+L+R
Sbjct: 454 EEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLAR 513
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
+G+ +EAK + M PD W +LL++CRIHG VE G++ AE L EL+P N +YVLL
Sbjct: 514 SGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLL 573
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S+IYA G+WD V+++R + +KG++K PGC+ I+ VH F D P S+ I+ L
Sbjct: 574 SNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRML 633
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
++++R + + G+VPD S VL+D++ K L HSEKLAIAFGL+ PG IR+VKNL
Sbjct: 634 DEVDRLLEETGFVPDTSEVLYDMDEEWKEGALTQHSEKLAIAFGLISTKPGSTIRIVKNL 693
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RVC +CH+ATK ISKI REI+ RD RFH FK+G CSC D W
Sbjct: 694 RVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDRW 736
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 204/448 (45%), Gaps = 83/448 (18%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VSWN +I+G+ G +A+ + M + + ++ T ++L R ++L
Sbjct: 219 IPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSP-NQSTMVSVLSACGHLRSLEL 277
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ I + GFG + + + LVDMY+K G I A++ FD + +K+++++NTMI G
Sbjct: 278 GKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCH 337
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
L E EA+ LF M E + + TF +V
Sbjct: 338 LSLYE-------------------------------EALVLFEVMLRENVTPNDVTFLAV 366
Query: 181 LTACGGLLALEEGKQIHAFIIRN----DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
L AC L AL+ GK +HA+I +N + +NV + ++++ MY KC ++ AE VFR+M
Sbjct: 367 LPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMG 426
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
+++ SW AM+ G NG +E A+ +F M G +PDD T V+S+C
Sbjct: 427 SRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACT---------- 476
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-----WTALVSGY 351
+ G +E HR F+ MN +S + ++
Sbjct: 477 -------------------------QAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLL 511
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
A+ GK +E L M ++PD +L+AC G VE G + E + + + P
Sbjct: 512 ARSGKFDEAKVLMGNM---EMEPDGAIWGSLLNACRIHGQVEFGEYVAE---RLFELEPE 565
Query: 412 HD-HYTCMIDILSRAGRLEEAKSFINKM 438
+ Y + +I + AGR ++ K+
Sbjct: 566 NSGAYVLLSNIYAGAGRWDDVAKIRTKL 593
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 129/523 (24%), Positives = 209/523 (39%), Gaps = 101/523 (19%)
Query: 56 RCVDLG--RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNT 113
+C D+ +QIH I+K G + +F S L++ A P +++ +
Sbjct: 34 KCPDIPSLKQIHSLIIKSGLHNTLFAQSKLIEFCAL-------------SPSRDLSYALS 80
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
+ + + + W T+I ++ LF +M GL +
Sbjct: 81 LFHSIHH--------------QPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPN 126
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
TF S+ +C A E KQ+HA ++ + V ++L+ MY + +++A VF
Sbjct: 127 SHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFD 186
Query: 234 T-------------------------------MAWKNVVSWTAMLVGYGQNGCSEEAVKI 262
+ K+VVSW AM+ GY Q+G EEA+
Sbjct: 187 KSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALAC 246
Query: 263 FCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGK 322
F MQ + P+ T+ SV+S+C +L SLE G G + + NALV Y K
Sbjct: 247 FTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSK 306
Query: 323 CGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGV 382
CG I + +LF+ M +D + W ++ GY E + LFE ML + P++VT + V
Sbjct: 307 CGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAV 366
Query: 383 LSACSRAGLVEKGR--HYF---------------------------------EIMVKEYG 407
L AC+ G ++ G+ H + E + + G
Sbjct: 367 LPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMG 426
Query: 408 IRPIHDHYTCMIDILSRAGRLEEAKSFINKM---PFPPDAIGWATLLSSCRIHGNVEIGK 464
R + + MI L+ G E A +M F PD I + +LS+C G VE+G
Sbjct: 427 SRSLAS-WNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGH 485
Query: 465 WAAESLLELDPYNP--ASYVLLSSIYASKGKWDHVSQLRRTMR 505
S+ + +P Y + + A GK+D L M
Sbjct: 486 RYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNME 528
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 137/309 (44%), Gaps = 42/309 (13%)
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYC---KCKSIKYAESVFRTM 235
++L C + +L KQIH+ II++ + +F S L++ +C + + YA S+F ++
Sbjct: 30 NLLAKCPDIPSL---KQIHSLIIKSGLHNTLFAQSKLIE-FCALSPSRDLSYALSLFHSI 85
Query: 236 AWK--NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE 293
+ N+ W ++ + ++ +F M +G+ P+ T S+ SCA + E
Sbjct: 86 HHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHE 145
Query: 294 GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS---- 349
Q H +L L V +L+ Y + G + + +F++ +RD VS+TAL++
Sbjct: 146 AKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVS 205
Query: 350 ---------------------------GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGV 382
GY + G+ E + F +M + P++ T++ V
Sbjct: 206 EGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSV 265
Query: 383 LSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPP 442
LSAC +E G+ + V++ G ++D+ S+ G + A+ + M
Sbjct: 266 LSACGHLRSLELGK-WIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGME-DK 323
Query: 443 DAIGWATLL 451
D I W T++
Sbjct: 324 DVILWNTMI 332
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 255/648 (39%), Positives = 390/648 (60%), Gaps = 33/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D V++N L++G++ G +A+ ++ M + G + TF+ +L ++
Sbjct: 259 IPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGY-RPTEFTFAAILTAGIQLDDIEF 317
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+HG ++K F VFV + L+D Y+K
Sbjct: 318 GQQVHGFVVKCNFVWNVFVANALLDFYSK------------------------------- 346
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
V E+ +LF M + D IS+ ++T NG +E+++LF+E++ G F F ++
Sbjct: 347 HDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATL 406
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+ L L+ G+QIH+ I D + VG++LVDMY KC A +F +A ++
Sbjct: 407 LSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSS 466
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V WTAM+ Y Q G E+ +K+F MQR I D T S++ +CA+LASL G Q H
Sbjct: 467 VPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSH 526
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ +G IS + +ALV Y KCG+I+D+ ++F EM VR+ VSW AL+S YA+ G + T
Sbjct: 527 IIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCT 586
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LFE+M+ GL+PD V+L+ +L ACS GLVE+G YF+ M + Y + P +HY ID
Sbjct: 587 LRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTID 646
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY-NPA 479
+L R GR +EA+ + +MPF PD I W+++L+SC IH N E+ K AA L + + A
Sbjct: 647 MLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAA 706
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
YV +S+IYA+ G+WD+V ++++ MRE+GV+K P SW++ K + H+F+A+D + P +
Sbjct: 707 PYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMRE 766
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
I +L++L KM+K+GY PD S LH+V+ K++ L +HSE++AIAF L+ P G PI
Sbjct: 767 IMKKLDELEEKMVKKGYKPDSSCALHNVDEEVKVESLKYHSERIAIAFALISTPEGSPIL 826
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V+KNLR C+DCH A K ISKI +REI VRD+ RFH F++G C+C D+W
Sbjct: 827 VMKNLRACTDCHAAIKVISKIVRREITVRDSSRFHHFRDGFCTCRDYW 874
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 235/454 (51%), Gaps = 34/454 (7%)
Query: 6 GVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIH 65
V+W +LI G+A + +A ++ M + G+ + ++ +T+L + V+ RQ+H
Sbjct: 163 AVTWTMLIGGYAQNNQFREAFGLFIEMGRHGI-DPDHVSLATLLSGFTEFDSVNEVRQVH 221
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
H++K G+ S + V + L+D Y K + A + F+++PE+
Sbjct: 222 SHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPER------------------- 262
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
DS+++ ++TG + G REAI+LF +M+ G +FTF ++LTA
Sbjct: 263 ------------DSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGI 310
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
L +E G+Q+H F+++ + NVFV +AL+D Y K + A +F M + +S+
Sbjct: 311 QLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNV 370
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
++ Y NG +E++++F +Q G + +F +++S A +L+ G Q H +++VT
Sbjct: 371 LVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTD 430
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
IS I V N+LV Y KCG +++R+F+++ ++ V WTA++S Y + G + + LF
Sbjct: 431 AISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFV 490
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
+M + D T ++ AC+ + G+ ++ I + + ++D+ ++
Sbjct: 491 EMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSG-SALVDMYAKC 549
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
G +++A +MP +++ W L+S+ +G+
Sbjct: 550 GSIKDALQMFQEMPV-RNSVSWNALISAYAQNGD 582
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 127/458 (27%), Positives = 233/458 (50%), Gaps = 17/458 (3%)
Query: 11 LLISGHASHGSVNDAVKVYNLMLKDGLGNLS-------RITFSTM--LIMSSSRRCVDL- 60
LL+ G +++ + ND++KV+ ++ N +T S M +I +R V
Sbjct: 20 LLLDGWSNYLNKNDSIKVWTCVICLIFTNAGHFGSKQYELTLSLMNNIIKPCTRNLVTTL 79
Query: 61 -GRQIHGH----ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
+ H H I+K GF + + LV + + G + A++ FDE+P KNI NTMI
Sbjct: 80 TAPKPHLHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMI 139
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
G ++ G + E+R LF M + +++WT +I G QN REA LF EM G+ D
Sbjct: 140 MGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHV 199
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
+ ++L+ ++ E +Q+H+ +I+ + + V ++L+D YCK +S+ A +F +
Sbjct: 200 SLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDI 259
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
++ V++ A+L GY + G + EA+ +F MQ G P +FT +++++ L +E G
Sbjct: 260 PERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQ 319
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
Q HG + + + V+NAL+ FY K + ++ +LF EM D +S+ LV+ YA G
Sbjct: 320 QVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNG 379
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
+ E+++LF+++ G +LS + + ++ GR + I I
Sbjct: 380 RVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGN 439
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+ ++D+ ++ G EA + + ++ W ++SS
Sbjct: 440 S-LVDMYAKCGEFGEANRIFSDLAI-QSSVPWTAMISS 475
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 259/692 (37%), Positives = 403/692 (58%), Gaps = 54/692 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTML-----IMSSSRRCVD 59
D V +N +I+ ++ + + A++++ M +D TF+++L + + C
Sbjct: 111 DSVFYNAMITAYSHNHDGHAAIELFCDMQRDNF-RPDNYTFTSVLGALALVAEKEKHC-- 167
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLG---------LIYDAKRGFDELPEKNIVM 110
+Q+H ++K G G V + L+ Y K L+ +A++ FDE+P ++ +
Sbjct: 168 --QQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELS 225
Query: 111 YNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL 170
+ T+ITG ++ ++ ++ G K ++W MI+G GL EA ++FR+M + +
Sbjct: 226 WTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKI 285
Query: 171 AMDQFTFGSVLTACGGLLALEEGKQIHAFIIR---NDHKDNVF-VGSALVDMYCKCKSIK 226
+D+FTF SV++ C GK++HA+ ++ N D V +AL+ Y KC +
Sbjct: 286 QLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVD 345
Query: 227 YAESVFRTM------AW-------------------------KNVVSWTAMLVGYGQNGC 255
A+ +F M +W KN++SW M+ G Q G
Sbjct: 346 IAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGF 405
Query: 256 SEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNA 315
+EEA+K F M+ G EP D+ I SC+ L SL+ G Q H + + G S ++ NA
Sbjct: 406 AEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNA 465
Query: 316 LVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPD 375
L+T Y +CG ++ +H LF M D +SW A+++ + G+ + I+LFE+ML G+ PD
Sbjct: 466 LITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPD 525
Query: 376 EVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFI 435
++ + V+SACS AGLV++GR YF+ M YG+ P +HY +ID+L RAG+ EAK +
Sbjct: 526 RISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVM 585
Query: 436 NKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWD 495
MPF P A W LL+ CRIHGN+++G AAE L EL P + +YVLLS++YA G+W+
Sbjct: 586 ESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDGTYVLLSNMYAVAGQWN 645
Query: 496 HVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEG 555
++++R+ MR++GV+K+PGCSWI+ +++VH F D + P QIY LE+L +M K G
Sbjct: 646 DMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGDANHPEVRQIYNYLEQLVLEMRKIG 705
Query: 556 YVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATK 615
YVPD VLHDVE K L+ HSEKLA+A+G + +P G +RV KNLR+C DCHNA K
Sbjct: 706 YVPDTKCVLHDVESDLKEHELSTHSEKLAVAYGFMKLPHGATVRVFKNLRICGDCHNAFK 765
Query: 616 YISKITQREILVRDAVRFHLFKNGECSCGDFW 647
++SK+ REI+VRD RFH F++G+CSCGD+W
Sbjct: 766 FMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 797
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 134/481 (27%), Positives = 213/481 (44%), Gaps = 86/481 (17%)
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
L R +H H++ GF + + L+D+Y+K + A+ FDE+P+ +IV T+I
Sbjct: 31 LARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYS 90
Query: 120 RRGLVEESRRLFR----GMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
G ++ SR++F GM +DS+ + MIT N AI+LF +M+ + D +
Sbjct: 91 AAGDLKLSRKIFSDTPLGM--RDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNY 148
Query: 176 TFGSVLTACGGLLALEEG--KQIHAFIIRNDHKDNVFVGSALVDMYCKCKS--------- 224
TF SVL A L+A +E +Q+H ++++ V +AL+ Y KC +
Sbjct: 149 TFTSVLGAL-ALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSL 207
Query: 225 IKYAESVFRTM------AWKNV-------------------------VSWTAMLVGYGQN 253
+ A +F M +W + V+W AM+ GY
Sbjct: 208 MAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHR 267
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT----GLISF 309
G EA ++F M + I+ D+FT SVIS CAN G + H L T
Sbjct: 268 GLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVA 327
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY------------------ 351
+ V+NAL+TFY KCG ++ + +FN+M RD VSW ++SGY
Sbjct: 328 MPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPE 387
Query: 352 -------------AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
A+ G A E + F +M G +P + G + +CS G ++ GR
Sbjct: 388 KNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQL 447
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+V+ YG +I + +R G ++ A MP DAI W ++++ HG
Sbjct: 448 HAQVVR-YGYESSLSAGNALITMYARCGVVDAAHCLFINMPC-VDAISWNAMIAALGQHG 505
Query: 459 N 459
Sbjct: 506 Q 506
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 119/285 (41%), Gaps = 71/285 (24%)
Query: 1 MPFHDGVSWNLLISGH-------------------------------ASHGSVNDAVKVY 29
MP D VSWN+++SG+ A G +A+K +
Sbjct: 354 MPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFF 413
Query: 30 NLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAK 89
N M G F+ +I S + GRQ+H ++++G+ S + G+ L+ MYA+
Sbjct: 414 NRMKLQGFEPCD-YAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYAR 472
Query: 90 LGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGL 149
G++ A F +P + + +N MI L
Sbjct: 473 CGVVDAAHCLFINMPCVDAISWNAMIAAL------------------------------- 501
Query: 150 MQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQ----IHAFIIRNDH 205
Q+G +AI+LF EM EG+ D+ +F +V++AC ++EG++ +H N
Sbjct: 502 GQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPD 561
Query: 206 KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK-NVVSWTAMLVG 249
+++ + ++D+ C+ A+ V +M ++ W A+L G
Sbjct: 562 EEHY---ARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAG 603
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 7/137 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D +SWN +I+ HG A++++ MLK+G+ RI+F T++ S V
Sbjct: 486 MPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILP-DRISFLTVISACSHAGLVKE 544
Query: 61 GRQIHGHILK-FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITGL 118
GR+ + +G + ++D+ + G +AK + +P E ++ ++ G
Sbjct: 545 GRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGC 604
Query: 119 LRRGL----VEESRRLF 131
G +E + RLF
Sbjct: 605 RIHGNIDLGIEAAERLF 621
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 269/643 (41%), Positives = 382/643 (59%), Gaps = 33/643 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +SWN ++ G A +G ++A V+ M ++GL S T+ ++L S ++ ++
Sbjct: 488 DVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDS-TTYLSLLNTHGSTDALEWVNEV 546
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H H ++ G S VGS + MY + G I DA+ FD+L +++
Sbjct: 547 HKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVT--------------- 591
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+W MI G Q REA+ LF +M+ EG D TF ++L+A
Sbjct: 592 ----------------TWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSAN 635
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
ALE K++H+ D + VG+ALV Y KC ++KYA+ VF M +NV +WT
Sbjct: 636 VDEEALEWVKEVHSHATDAGLVD-LRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWT 694
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
M+ G Q+GC +A F M R GI PD T S++S+CA+ +LE + H ++
Sbjct: 695 MMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSA 754
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
GL+S + V NALV Y KCG+I+D+ +F++M RD SWT ++ G A+ G+ E +D F
Sbjct: 755 GLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFF 814
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
KM S G KP+ + + VL+ACS AGLV++GR F M ++YGI P +HYTCM+D+L R
Sbjct: 815 VKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGR 874
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG LEEA+ FI MP PD W LL +C +GN+E+ ++AA+ L+L P + ++YVLL
Sbjct: 875 AGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLL 934
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S+IYA+ GKW+ +R M+ KG+RK+PG SWI+ +R+H F D S P S +IYA+L
Sbjct: 935 SNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQL 994
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
L ++ +GYVPD VL + + K + L HSEKLAI +GL+ PIRV KNL
Sbjct: 995 NDLIERLKAKGYVPDTRLVLRNTDQEHKEQALCSHSEKLAIVYGLMHTQSKDPIRVYKNL 1054
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RVCSDCH ATK+ISKIT REI+ RDA RFH FK+G CSCGD+W
Sbjct: 1055 RVCSDCHTATKFISKITGREIVARDAKRFHHFKDGVCSCGDYW 1097
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 148/500 (29%), Positives = 241/500 (48%), Gaps = 70/500 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDG-LGNLSRITFSTMLIMS--SSRRC 57
M D SW ++I G A HG +A ++ M ++G L NL+ T+ ++L S +S
Sbjct: 381 MTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLT--TYLSILNASAIASTSA 438
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
++ + +H H + GF S + +G+ L+ MYAK G I DA+ FD + +++++ +N M+ G
Sbjct: 439 LEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGG 498
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
L QNG EA +F +M+ EGL D T+
Sbjct: 499 -------------------------------LAQNGCGHEAFTVFLQMQQEGLVPDSTTY 527
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
S+L G ALE ++H + + VGSA + MY +C SI A +F ++
Sbjct: 528 LSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSV 587
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
++V +W AM+ G Q C EA+ +F MQR G PD T +++S+ + +LE +
Sbjct: 588 RHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEV 647
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H + GL+ + V NALV Y KCGN++ + ++F++M R+ +WT ++ G A+ G
Sbjct: 648 HSHATDAGLVD-LRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCG 706
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVE--KGRHYFEI-------------M 402
++ F +ML G+ PD T + +LSAC+ G +E K H + +
Sbjct: 707 HDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNAL 766
Query: 403 VKEYG-------IRPIHD--------HYTCMIDILSRAGRLEEAKSFINKMP---FPPDA 444
V Y R + D +T MI L++ GR EA F KM F P+
Sbjct: 767 VHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNG 826
Query: 445 IGWATLLSSCRIHGNVEIGK 464
+ +L++C G V+ G+
Sbjct: 827 YSYVAVLTACSHAGLVDEGR 846
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/432 (31%), Positives = 221/432 (51%), Gaps = 35/432 (8%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
W +I G+A +G DA++VY+ M ++ G + IT+ ++L + G++IH HI
Sbjct: 187 WTTMIGGYAEYGHAEDAMRVYDKMRQE-CGQPNEITYLSILKACCCPVNLKWGKKIHAHI 245
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
++ GF S V V + LV+MY K G I DA+ FD++ E+N++ + MI GL G
Sbjct: 246 IQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYG------ 299
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
RG +EA LF +M+ EG + +T+ S+L A
Sbjct: 300 ---RG----------------------QEAFHLFLQMQREGFIPNSYTYVSILNANASAG 334
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
ALE K++H+ + ++ VG+ALV MY K SI A VF M +++ SWT M+
Sbjct: 335 ALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIG 394
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI--SSCANLASLEEGTQFHGRSLVTGL 306
G Q+G +EA +F MQRNG P+ T S++ S+ A+ ++LE H + G
Sbjct: 395 GLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGF 454
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
IS + + NAL+ Y KCG+I+D+ +F+ M RD +SW A++ G A+ G +E +F +
Sbjct: 455 ISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQ 514
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M GL PD T + +L+ +E + V E G+ + I + R G
Sbjct: 515 MQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAV-ETGLISDFRVGSAFIHMYIRCG 573
Query: 427 RLEEAKSFINKM 438
+++A+ +K+
Sbjct: 574 SIDDARLLFDKL 585
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 156/555 (28%), Positives = 255/555 (45%), Gaps = 74/555 (13%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
+SW ++I G A +G +A ++ M ++G S T+ ++L ++S ++ +++H
Sbjct: 286 ISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNS-YTYVSILNANASAGALEWVKEVHS 344
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
H + G + VG+ LV MYAK G I DA
Sbjct: 345 HAVNAGLALDLRVGNALVHMYAKSGSIDDA------------------------------ 374
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL--TAC 184
R +F GM ++D SWT MI GL Q+G +EA LF +M+ G + T+ S+L +A
Sbjct: 375 -RVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAI 433
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
ALE K +H ++ +G+AL+ MY KC SI A VF M ++V+SW
Sbjct: 434 ASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWN 493
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
AM+ G QNGC EA +F MQ+ G+ PD T S++++ + +LE + H ++ T
Sbjct: 494 AMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVET 553
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
GLIS V +A + Y +CG+I+D+ LF++++VR +W A++ G A+ E + LF
Sbjct: 554 GLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLF 613
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT-------- 416
+M G PD T I +LSA +E ++ +H H T
Sbjct: 614 LQMQREGFIPDATTFINILSANVDEEALE-------------WVKEVHSHATDAGLVDLR 660
Query: 417 ---CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL 473
++ S+ G ++ AK + M + W ++ HG G A L++
Sbjct: 661 VGNALVHTYSKCGNVKYAKQVFDDM-VERNVTTWTMMIGGLAQHG---CGHDAFSHFLQM 716
Query: 474 DPY----NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF-- 527
+ +YV + S AS G + V ++ G+ D + VH++
Sbjct: 717 LREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVG----NALVHMYAK 772
Query: 528 --SADDWSSPYSDQI 540
S DD S + D +
Sbjct: 773 CGSIDDARSVFDDMV 787
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 162/639 (25%), Positives = 297/639 (46%), Gaps = 80/639 (12%)
Query: 21 SVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVG 80
+ DAV + + ++ G+ + ++ +L + + L +Q+H I+K G ++V
Sbjct: 98 TAKDAVAMLKIRVQQGIA-IDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVA 156
Query: 81 SPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSI 140
+ L+ +Y + G + A++ FD+L +KNI +
Sbjct: 157 NKLLRVYIRCGRLQCARQVFDKLLKKNIYI------------------------------ 186
Query: 141 SWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFI 200
WTTMI G + G +A+ ++ +MR E ++ T+ S+L AC + L+ GK+IHA I
Sbjct: 187 -WTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHI 245
Query: 201 IRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAV 260
I++ + +V V +ALV+MY KC SI+ A+ +F M +NV+SWT M+ G G +EA
Sbjct: 246 IQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAF 305
Query: 261 KIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFY 320
+F MQR G P+ +T S++++ A+ +LE + H ++ GL + V NALV Y
Sbjct: 306 HLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMY 365
Query: 321 GKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLI 380
K G+I+D+ +F+ M RD SWT ++ G A+ G+ E LF +M +G P+ T +
Sbjct: 366 AKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYL 425
Query: 381 GVLSACSRAGLVEKGRHYFEIMVK---EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINK 437
+L+A + A + +++ K E G +I + ++ G +++A+ +
Sbjct: 426 SILNASAIAS--TSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDG 483
Query: 438 MPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY----NPASYVLLSSIYASKGK 493
M D I W ++ +G G A L++ + +Y+ L + + S
Sbjct: 484 MC-DRDVISWNAMMGGLAQNG---CGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDA 539
Query: 494 WDHVSQLRRTMREKGVRKD--PGCSWIKYKSRVHIFSADD---------------WSS-- 534
+ V+++ + E G+ D G ++I R S DD W++
Sbjct: 540 LEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCG--SIDDARLLFDKLSVRHVTTWNAMI 597
Query: 535 --PYSDQIYAELEKLNRKMIKEGYVPDMSSVLH------DVELSEKIKMLNHHSEKLAIA 586
+ E L +M +EG++PD ++ ++ D E E +K ++ H A
Sbjct: 598 GGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSH----ATD 653
Query: 587 FGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREI 625
GL+ + G + V C + A + + +R +
Sbjct: 654 AGLVDLRVGNAL--VHTYSKCGNVKYAKQVFDDMVERNV 690
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 258/668 (38%), Positives = 401/668 (60%), Gaps = 25/668 (3%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLML-----KDGLGNLSRITFSTMLIMSSSRRCVD 59
D +SWN ++S H + A+ +++ M K I+ +L S + V
Sbjct: 78 DVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVP 137
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+++HG+ ++ G VFVG+ L+D YAK GL+ +A + F+ + K++V +N M+ G
Sbjct: 138 QTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYS 197
Query: 120 RRGLVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
+ G + + LF+ M+ + D ++WT +I G Q G EA+++FR+M G +
Sbjct: 198 QSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCV 257
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRN----------DHKDNVFVGSALVDMYCKCKSI 225
T SVL+AC L A +G +IHA+ ++N +++ V +AL+DMY KC+S
Sbjct: 258 TIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSF 317
Query: 226 KYAESVFRTMAW--KNVVSWTAMLVGYGQNGCSEEAVKIFCNM--QRNGIEPDDFTLGSV 281
K A S+F + +NVV+WT M+ G+ Q G S +A+K+F M + G+ P+ +T+ +
Sbjct: 318 KAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCI 377
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLI--SFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
+ +CA+LA++ G Q H L S V+N L+ Y KCG+++ + +F+ M+ +
Sbjct: 378 LMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQK 437
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
+SWT++++GY G+ +E +D+F+KM G PD++T + VL ACS G+V++G YF
Sbjct: 438 SAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYF 497
Query: 400 EIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+ M +YG+ P +HY ID+L+R GRL++A + MP P A+ W LLS+CR+H N
Sbjct: 498 DSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSN 557
Query: 460 VEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIK 519
VE+ + A L+E++ N SY L+S+IYA+ G+W V+++R M++ G++K PGCSW++
Sbjct: 558 VELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQ 617
Query: 520 YKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHH 579
+ F D S P S QIYA LE L ++ GYVP+ + LHDV+ EK +L H
Sbjct: 618 GQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEH 677
Query: 580 SEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNG 639
SEKLA+A+GLL PG PIR+ KNLRVC DCH+A YISKI EI+VRD RFH FKNG
Sbjct: 678 SEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNG 737
Query: 640 ECSCGDFW 647
CSCG +W
Sbjct: 738 SCSCGGYW 745
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 231/492 (46%), Gaps = 108/492 (21%)
Query: 54 SRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNT 113
S RC G HG I GF S VF+ + LV MY++ G + +A FDE+ ++ I
Sbjct: 25 SYRC---GSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGI----- 76
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL------ 167
D ISW ++++ +++ A+DLF +M L
Sbjct: 77 -----------------------DDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKP 113
Query: 168 EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY 227
D + ++L ACG L A+ + K++H IRN +VFVG+AL+D Y KC ++
Sbjct: 114 TNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMEN 173
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQN---------------------------------- 253
A VF M +K+VVSW AM+ GY Q+
Sbjct: 174 AVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQ 233
Query: 254 -GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF--- 309
GCS EA+ +F M +G P+ T+ SV+S+CA+L + +G + H SL L++
Sbjct: 234 RGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDND 293
Query: 310 -------ITVSNALVTFYGKCGNIEDSHRLFNEMNV--RDEVSWTALVSGYAKFGKANET 360
+ V NAL+ Y KC + + + +F+++ + R+ V+WT ++ G+A++G +N+
Sbjct: 294 FGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDA 353
Query: 361 IDLFEKMLS--HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--- 415
+ LF +M+S +G+ P+ T+ +L AC+ + G+ + Y +R H Y
Sbjct: 354 LKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQ-----IHAYVLR--HHQYDSS 406
Query: 416 -----TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL 470
C+I++ S+ G ++ A+ + M AI W ++++ +HG +E+L
Sbjct: 407 AYFVANCLINMYSKCGDVDTARHVFDSMS-QKSAISWTSMMTGYGMHGR------GSEAL 459
Query: 471 LELDPYNPASYV 482
D A +V
Sbjct: 460 DIFDKMRKAGFV 471
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/476 (23%), Positives = 202/476 (42%), Gaps = 84/476 (17%)
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M G +D FT VL ACG L + G H I N + NVF+ +ALV MY +C S
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 225 IKYAESVFRTMAWK---NVVSWTAMLVGYGQNGCSEEAVKIFCNM------QRNGIEPDD 275
++ A +F + + +V+SW +++ + ++ + A+ +F M + D
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 276 FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNE 335
++ +++ +C +L ++ + + HG ++ G + V NAL+ Y KCG +E++ ++FN
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180
Query: 336 MNVRDEVSWTALVSGYAKFGK-----------------------------------ANET 360
M +D VSW A+V+GY++ G ++E
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH------ 414
+++F +M+ G P+ VT+I VLSAC+ G +G +K + +D
Sbjct: 241 LNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDED 300
Query: 415 ---YTCMIDILSRAGRLEEAKSFINKMPFPP-DAIGWATLLSSCRIHGNVEIGKWAAESL 470
Y +ID+ S+ + A+S + +P + + W ++ H A +
Sbjct: 301 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGG---HAQYGDSNDALKLF 357
Query: 471 LEL--DPYN--PASYVLLSSIYASK-------GKWDHVSQLRRTMREKGVRKDPGCSWIK 519
+E+ +PY P +Y + + A GK H LR + C
Sbjct: 358 VEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINM 417
Query: 520 YK------SRVHIF------SADDWSSPYSDQIY----AELEKLNRKMIKEGYVPD 559
Y + H+F SA W+S + +E + KM K G+VPD
Sbjct: 418 YSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPD 473
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 266/655 (40%), Positives = 395/655 (60%), Gaps = 42/655 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VS+N LI+ +A G A+ ++ M + GL + TFS ++ + V L
Sbjct: 100 IPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLV-MDGFTFSGVITACCNH--VGL 156
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
RQ+H GF SYV V + L+ Y+K
Sbjct: 157 IRQLHSLAFSSGFDSYVSVKNSLLTYYSK------------------------------- 185
Query: 121 RGLVEESRRLFRGMKD--KDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
G++EE+ +F GM + +D +SW +MI Q+ +A+ L+R+M G +D FT
Sbjct: 186 NGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLA 245
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS-IKYAESVFRTMAW 237
SVLT + L G Q HA I+ N VGS L+DMY KC + + + VF +
Sbjct: 246 SVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICG 305
Query: 238 KNVVSWTAMLVGYGQNG-CSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
++V W M+ GY QN S EA++ F MQR G PDD + IS+C+NL+S +G Q
Sbjct: 306 SDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQ 365
Query: 297 FHGRSLVTGLIS-FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
FH ++ + + S I+V+NALVT Y KCGN++D+ +LF M + V+ ++++GYA+ G
Sbjct: 366 FHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHG 425
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
E+++LFE+ML+ + P +TL+ +LSAC+ G VE+G+ YF +M +GI P +HY
Sbjct: 426 IGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHY 485
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
+CMID+L RAG+L EA+ I+ MPF P + WA LL +CR +GN+E+ + AA L+L+P
Sbjct: 486 SCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEP 545
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSP 535
N Y++L+S+Y++ KW+ +++R+ MR++G+RK PGCSWI+ RVH+F A+D S P
Sbjct: 546 TNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHP 605
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMS-SVLHDVELSEKIK--MLNHHSEKLAIAFGLLFI 592
+I+ L+++ KM + GYVPD+ + + D E E+ K ML HHSEKLA+AFGLLF
Sbjct: 606 RIKEIHMYLDEMFVKMKRAGYVPDVRWAFVKDDETGEQEKEIMLAHHSEKLAVAFGLLFT 665
Query: 593 PPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G P+ VVKNLR+C DCHNA K++S I +R+I VRDA RFH F++G CSCGD+W
Sbjct: 666 KHGEPLLVVKNLRICGDCHNAIKFMSAIARRKITVRDAYRFHCFEDGRCSCGDYW 720
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 143/320 (44%), Gaps = 43/320 (13%)
Query: 172 MDQFT-----FGSVLTACGGLLALEEGKQIHAFIIRN----------------------- 203
M QF+ F +L +C L GK +H +++
Sbjct: 1 MTQFSWTLQSFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLT 60
Query: 204 --------DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGC 255
H+ NVF +AL+ Y K I A +F + ++VS+ ++ Y G
Sbjct: 61 TAHHAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGD 120
Query: 256 SEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNA 315
+ A+ +F M+ G+ D FT VI++C N L Q H + +G S+++V N+
Sbjct: 121 TLSALSLFGEMREMGLVMDGFTFSGVITACCNHVGLIR--QLHSLAFSSGFDSYVSVKNS 178
Query: 316 LVTFYGKCGNIEDSHRLFNEM--NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLK 373
L+T+Y K G +E++ +FN M VRDEVSW +++ Y + + + + L+ M+ G +
Sbjct: 179 LLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFE 238
Query: 374 PDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR-LEEAK 432
D TL VL+ S + G + +K G + +ID+ ++ G + E++
Sbjct: 239 IDMFTLASVLTTFSCVEDLSGGLQFHAKAIKT-GFNKNRHVGSGLIDMYAKCGAGMSESR 297
Query: 433 SFINKMPFPPDAIGWATLLS 452
++ D + W T++S
Sbjct: 298 KVFEEIC-GSDLVVWNTMIS 316
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 254/594 (42%), Positives = 374/594 (62%), Gaps = 7/594 (1%)
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKL---GLIYDAKRGFDELPEKNIVMYNTMI- 115
G +HG I++ G ++ G+ L++MYAKL G FDE+P++ + +
Sbjct: 123 FGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVK 182
Query: 116 --TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
T ++ G ++ RR+F M KD +S+ T+I G Q+G+ +A+ + REM L D
Sbjct: 183 AETCIMPFG-IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
FT SVL + + +GK+IH ++IR +V++GS+LVDMY K I+ +E VF
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 301
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE 293
+ ++ +SW +++ GY QNG EA+++F M ++P SVI +CA+LA+L
Sbjct: 302 RLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHL 361
Query: 294 GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK 353
G Q HG L G S I +++ALV Y KCGNI+ + ++F+ MNV DEVSWTA++ G+A
Sbjct: 362 GKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHAL 421
Query: 354 FGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
G +E + LFE+M G+KP++V + VL+ACS GLV++ YF M K YG+ +
Sbjct: 422 HGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELE 481
Query: 414 HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL 473
HY + D+L RAG+LEEA +FI+KM P W+TLLSSC +H N+E+ + AE + +
Sbjct: 482 HYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTV 541
Query: 474 DPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWS 533
D N +YVL+ ++YAS G+W +++LR MR+KG+RK P CSWI+ K++ H F + D S
Sbjct: 542 DSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRS 601
Query: 534 SPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIP 593
P D+I L+ + +M KEGYV D S VLHDV+ K ++L HSE+LA+AFG++
Sbjct: 602 HPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTE 661
Query: 594 PGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
PG IRV KN+R+C+DCH A K+ISKIT+REI+VRD RFH F G CSCGD+W
Sbjct: 662 PGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 196/369 (53%), Gaps = 38/369 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VS+N +I+G+A G DA+++ M L S T S++L + S V
Sbjct: 202 MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDS-FTLSSVLPIFSEYVDVIK 260
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G++IHG++++ G S V++GS LVDMYAK I D++R F L ++ + +N+++ G ++
Sbjct: 261 GKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQ 320
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G E+ RLFR M+T ++ G F SV
Sbjct: 321 NGRYNEALRLFR-----------QMVTAKVKPG--------------------AVAFSSV 349
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ AC L L GKQ+H +++R N+F+ SALVDMY KC +IK A +F M +
Sbjct: 350 IPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDE 409
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQFHG 299
VSWTA+++G+ +G EAV +F M+R G++P+ +V+++C+++ ++E F+
Sbjct: 410 VSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNS 469
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKAN 358
+ V GL + A+ G+ G +E+++ ++M V S W+ L+S + +
Sbjct: 470 MTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCS----VH 525
Query: 359 ETIDLFEKM 367
+ ++L EK+
Sbjct: 526 KNLELAEKV 534
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 174/365 (47%), Gaps = 38/365 (10%)
Query: 131 FRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLAL 190
F+ +K ++W ++I L +A+ F EMR G D F SVL +C ++ L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 191 EEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK--------------------------- 223
G+ +H FI+R +++ G+AL++MY K
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 224 ---------SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD 274
I VF M K+VVS+ ++ GY Q+G E+A+++ M ++PD
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN 334
FTL SV+ + + +G + HG + G+ S + + ++LV Y K IEDS R+F+
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 301
Query: 335 EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEK 394
+ RD +SW +LV+GY + G+ NE + LF +M++ +KP V V+ AC+ +
Sbjct: 302 RLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHL 361
Query: 395 GRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
G+ +++ G + ++D+ S+ G ++ A+ ++M D + W ++
Sbjct: 362 GKQLHGYVLRG-GFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMGH 419
Query: 455 RIHGN 459
+HG+
Sbjct: 420 ALHGH 424
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 139/312 (44%), Gaps = 48/312 (15%)
Query: 192 EGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYG 251
+ KQ+HA IR + S ++ +Y K + A +F+T+ V++W +++ +
Sbjct: 23 QAKQLHAQFIRTQSLSHT-SASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFT 81
Query: 252 QNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFIT 311
+A+ F M+ +G PD SV+ SC + L G HG + G+ +
Sbjct: 82 DQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLY 141
Query: 312 VSNALVTFYGK---------CGNIEDS---------------------------HRLFNE 335
NAL+ Y K GN+ D R+F
Sbjct: 142 TGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEV 201
Query: 336 MNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG 395
M +D VS+ +++GYA+ G + + + +M + LKPD TL VL S V KG
Sbjct: 202 MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG 261
Query: 396 RHYFEIMVKEYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+ ++++ GI D Y + ++D+ +++ R+E+++ +++ + D I W +L++
Sbjct: 262 KEIHGYVIRK-GIDS--DVYIGSSLVDMYAKSARIEDSERVFSRL-YCRDGISWNSLVA- 316
Query: 454 CRIHGNVEIGKW 465
G V+ G++
Sbjct: 317 ----GYVQNGRY 324
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 257/647 (39%), Positives = 399/647 (61%), Gaps = 17/647 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SWN ++SG+A +G V+DA V++ M + + ++++ +L ++
Sbjct: 152 MPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK-----NDVSWNALLSAYVQNSKMEE 206
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+ + S+ + L+ + K I +A++ FD + +++V +NT+ITG +
Sbjct: 207 ACMLFKSRENWALVSW----NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQ 262
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G ++E+R+LF +D +WT M++G +QN + EA +LF +M ++ ++ ++
Sbjct: 263 SGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAM 318
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L +E K++ + NV + ++ Y +C I A+++F M ++
Sbjct: 319 LAGYVQGERMEMAKELFDVMPCR----NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDP 374
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW AM+ GY Q+G S EA+++F M+R G + + S +S+CA++ +LE G Q HGR
Sbjct: 375 VSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGR 434
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ G + V NAL+ Y KCG+IE+++ LF EM +D VSW +++GY++ G
Sbjct: 435 LVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVA 494
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ FE M GLKPD+ T++ VLSACS GLV+KGR YF M ++YG+ P HY CM+D
Sbjct: 495 LRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVD 554
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG LE+A + + MPF PDA W TLL + R+HGN E+ + AA+ + ++P N
Sbjct: 555 LLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGM 614
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS++YAS G+W V +LR MR+KGV+K PG SWI+ +++ H FS D P D+I
Sbjct: 615 YVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEI 674
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
+A LE+L+ +M K GYV S VLHDVE EK +M+ +HSE+LA+A+G++ + G PIRV
Sbjct: 675 FAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRV 734
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+KNLRVC DCHNA KY+++IT R I++RD RFH FK+G CSCGD+W
Sbjct: 735 IKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 119/508 (23%), Positives = 223/508 (43%), Gaps = 85/508 (16%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN+ IS + G N+A++V+ M + S ++++ M
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPR-----WSSVSYNGM-------------------- 101
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+ Y + G A++ FDE+PE+++V +N MI G +R + ++R
Sbjct: 102 ---------------ISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKAR 146
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
LF M ++D SW TM++G QNG +A +F M + + ++ ++L+A
Sbjct: 147 ELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSA----- 197
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVG-SALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
++ K A ++ ++ V + L+ + K K I A F +M ++VVSW ++
Sbjct: 198 YVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTII 257
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR------- 300
GY Q+G +EA ++F D FT +++S +EE + +
Sbjct: 258 TGYAQSGKIDEARQLF----DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEV 313
Query: 301 ---SLVTGLIS-----------------FITVSNALVTFYGKCGNIEDSHRLFNEMNVRD 340
+++ G + ++ N ++T Y +CG I ++ LF++M RD
Sbjct: 314 SWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRD 373
Query: 341 EVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
VSW A+++GY++ G + E + LF +M G + + + LS C+ +E G+
Sbjct: 374 PVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHG 433
Query: 401 IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
+VK G ++ + + G +EEA +M D + W T+++ HG
Sbjct: 434 RLVKG-GYETGCFVGNALLLMYCKCGSIEEANDLFKEMA-GKDIVSWNTMIAGYSRHGFG 491
Query: 461 EIGKWAAESLLE--LDPYNPASYVLLSS 486
E+ ES+ L P + +LS+
Sbjct: 492 EVALRFFESMKREGLKPDDATMVAVLSA 519
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 258/668 (38%), Positives = 401/668 (60%), Gaps = 25/668 (3%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLML-----KDGLGNLSRITFSTMLIMSSSRRCVD 59
D +SWN ++S H + A+ +++ M K I+ +L S + V
Sbjct: 185 DVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVP 244
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+++HG+ ++ G VFVG+ L+D YAK GL+ +A + F+ + K++V +N M+ G
Sbjct: 245 QTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYS 304
Query: 120 RRGLVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
+ G + + LF+ M+ + D ++WT +I G Q G EA+++FR+M G +
Sbjct: 305 QSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCV 364
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRN----------DHKDNVFVGSALVDMYCKCKSI 225
T SVL+AC L A +G +IHA+ ++N +++ V +AL+DMY KC+S
Sbjct: 365 TIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSF 424
Query: 226 KYAESVFRTMAW--KNVVSWTAMLVGYGQNGCSEEAVKIFCNM--QRNGIEPDDFTLGSV 281
K A S+F + +NVV+WT M+ G+ Q G S +A+K+F M + G+ P+ +T+ +
Sbjct: 425 KAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCI 484
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLI--SFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
+ +CA+LA++ G Q H L S V+N L+ Y KCG+++ + +F+ M+ +
Sbjct: 485 LMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQK 544
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
+SWT++++GY G+ +E +D+F+KM G PD++T + VL ACS G+V++G YF
Sbjct: 545 SAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYF 604
Query: 400 EIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+ M +YG+ P +HY ID+L+R GRL++A + MP P A+ W LLS+CR+H N
Sbjct: 605 DSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSN 664
Query: 460 VEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIK 519
VE+ + A L+E++ N SY L+S+IYA+ G+W V+++R M++ G++K PGCSW++
Sbjct: 665 VELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQ 724
Query: 520 YKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHH 579
+ F D S P S QIYA LE L ++ GYVP+ + LHDV+ EK +L H
Sbjct: 725 GQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEH 784
Query: 580 SEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNG 639
SEKLA+A+GLL PG PIR+ KNLRVC DCH+A YISKI EI+VRD RFH FKNG
Sbjct: 785 SEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNG 844
Query: 640 ECSCGDFW 647
CSCG +W
Sbjct: 845 SCSCGGYW 852
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 144/516 (27%), Positives = 241/516 (46%), Gaps = 100/516 (19%)
Query: 6 GVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIH 65
V WNLLI H G ++ A+ V ML+ G L T +L G H
Sbjct: 82 AVWWNLLIREHIKQGRLDSAINVSCRMLRAGT-RLDHFTLPHVLKACGELPSYRCGSAFH 140
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
G I GF S VF+ + LV MY++ G + +A FDE+ ++ I
Sbjct: 141 GLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGI----------------- 183
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL------EGLAMDQFTFGS 179
D ISW ++++ +++ A+DLF +M L D + +
Sbjct: 184 -----------DDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 232
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L ACG L A+ + K++H IRN +VFVG+AL+D Y KC ++ A VF M +K+
Sbjct: 233 ILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 292
Query: 240 VVSWTAMLVGYGQN-----------------------------------GCSEEAVKIFC 264
VVSW AM+ GY Q+ GCS EA+ +F
Sbjct: 293 VVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFR 352
Query: 265 NMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF----------ITVSN 314
M +G P+ T+ SV+S+CA+L + +G + H SL L++ + V N
Sbjct: 353 QMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYN 412
Query: 315 ALVTFYGKCGNIEDSHRLFNEMNV--RDEVSWTALVSGYAKFGKANETIDLFEKMLS--H 370
AL+ Y KC + + + +F+++ + R+ V+WT ++ G+A++G +N+ + LF +M+S +
Sbjct: 413 ALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPY 472
Query: 371 GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--------TCMIDIL 422
G+ P+ T+ +L AC+ + G+ + Y +R H Y C+I++
Sbjct: 473 GVAPNAYTISCILMACAHLAAIRIGKQ-----IHAYVLR--HHQYDSSAYFVANCLINMY 525
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
S+ G ++ A+ + M AI W ++++ +HG
Sbjct: 526 SKCGDVDTARHVFDSMS-QKSAISWTSMMTGYGMHG 560
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 125/542 (23%), Positives = 229/542 (42%), Gaps = 88/542 (16%)
Query: 103 LPEKNIVMYNTMITGL----LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREA 158
LP + + ++ TG+ L G + + + + ++ W +I ++ G A
Sbjct: 42 LPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSA 101
Query: 159 IDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDM 218
I++ M G +D FT VL ACG L + G H I N + NVF+ +ALV M
Sbjct: 102 INVSCRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAM 161
Query: 219 YCKCKSIKYAESVFRTMAWK---NVVSWTAMLVGYGQNGCSEEAVKIFCNM------QRN 269
Y +C S++ A +F + + +V+SW +++ + ++ + A+ +F M +
Sbjct: 162 YSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPT 221
Query: 270 GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
D ++ +++ +C +L ++ + + HG ++ G + V NAL+ Y KCG +E++
Sbjct: 222 NERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENA 281
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGK--------------------------------- 356
++FN M +D VSW A+V+GY++ G
Sbjct: 282 VKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQR 341
Query: 357 --ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
++E +++F +M+ G P+ VT+I VLSAC+ G +G +K + +D
Sbjct: 342 GCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDF 401
Query: 415 ---------YTCMIDILSRAGRLEEAKSFINKMPFPP-DAIGWATLLSSCRIHGNVEIGK 464
Y +ID+ S+ + A+S + +P + + W ++ H
Sbjct: 402 GGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGG---HAQYGDSN 458
Query: 465 WAAESLLEL--DPYN--PASYVLLSSIYASK-------GKWDHVSQLRRTMREKGVRKDP 513
A + +E+ +PY P +Y + + A GK H LR +
Sbjct: 459 DALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVA 518
Query: 514 GCSWIKYK------SRVHIF------SADDWSSPYSDQIY----AELEKLNRKMIKEGYV 557
C Y + H+F SA W+S + +E + KM K G+V
Sbjct: 519 NCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFV 578
Query: 558 PD 559
PD
Sbjct: 579 PD 580
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 260/687 (37%), Positives = 396/687 (57%), Gaps = 48/687 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMS------SSRRCV 58
D V N +IS +A AV V+ +L G +F+ +L + S R C
Sbjct: 120 DTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCA 179
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAK---LGLIYDAKRGFDELPEKNIVMYNTMI 115
Q+ +LK G G + V + LV +Y K L DA++ DE+P+K+ + + TM+
Sbjct: 180 ----QLQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMV 235
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
G +RRG V +R +F + K + W MI+G + +G+ EA +LFR M LE + +D+F
Sbjct: 236 VGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEF 295
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDH----KDNVFVGSALVDMYCKCKSIKYAESV 231
TF SVL+AC GK +H I R + + V +ALV +Y KC +I A +
Sbjct: 296 TFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRI 355
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGC-------------------------------SEEAV 260
F M K+VVSW +L GY ++ C SE+A+
Sbjct: 356 FDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDAL 415
Query: 261 KIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFY 320
K+F M+ ++P D+T IS+C L SL+ G Q HG + G + NAL+T Y
Sbjct: 416 KLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMY 475
Query: 321 GKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLI 380
+CG +++++ +F M D VSW A++S + G E ++LF++M++ G+ PD ++ +
Sbjct: 476 ARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFL 535
Query: 381 GVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF 440
VL+AC+ +GLV++G YFE M +++GI P DHYT +ID+L RAGR+ EA+ I MPF
Sbjct: 536 TVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPF 595
Query: 441 PPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQL 500
P W +LS CR G++E+G AA+ L ++ P + +Y+LLS+ Y++ G+W +++
Sbjct: 596 EPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARV 655
Query: 501 RRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDM 560
R+ MR++GV+K+PGCSWI+ ++VH+F D P + ++Y LE + +M K GYVPD
Sbjct: 656 RKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDTKHPEAHKVYKFLEMVGARMRKLGYVPDT 715
Query: 561 SSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKI 620
VLHD+E +K +L HSE+LA+ FGLL +PPG + V+KNLR+C DCH ++SK
Sbjct: 716 KVVLHDMEPHQKEHILFAHSERLAVGFGLLKLPPGATVTVLKNLRICDDCHAVMMFMSKA 775
Query: 621 TQREILVRDAVRFHLFKNGECSCGDFW 647
REI+VRD RFH FK+GECSCG++W
Sbjct: 776 VGREIVVRDVRRFHHFKDGECSCGNYW 802
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 115/259 (44%), Gaps = 40/259 (15%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP+ + +SW +++SG+ G DA+K++N M + + T++ + +
Sbjct: 390 MPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCD-YTYAGAISACGELGSLKH 448
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+HGH+++ GF G+ L+ MYA+ G + +A F +P + V +N MI+ L +
Sbjct: 449 GKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQ 508
Query: 121 RGLVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
G E+ LF M + D IS+ T++T +GL E F M+ +
Sbjct: 509 HGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRD-------- 560
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
FG I DH + L+D+ + I A + +TM
Sbjct: 561 FG--------------------IIPGEDHY------TRLIDLLGRAGRIGEARDLIKTMP 594
Query: 237 WKNVVS-WTAMLVGYGQNG 254
++ S W A+L G +G
Sbjct: 595 FEPTPSIWEAILSGCRTSG 613
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%), Gaps = 25/210 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN +IS HG +A+++++ M+ +G+ RI+F T+L + VD
Sbjct: 491 MPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGI-YPDRISFLTVLTACNHSGLVDE 549
Query: 61 GRQIHGHILKFGFGSYVFVG----SPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMI 115
G Q + +K FG + G + L+D+ + G I +A+ +P E ++ ++
Sbjct: 550 GFQ-YFESMKRDFG--IIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAIL 606
Query: 116 TGLLRRGLVE----ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLA 171
+G G +E + +LF+ D ++ + G +A + + MR G+
Sbjct: 607 SGCRTSGDMELGAHAADQLFKMTPQHDG-TYILLSNTYSAAGRWVDAARVRKLMRDRGVK 665
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFII 201
+ G +E G ++H F++
Sbjct: 666 KEP-----------GCSWIEAGNKVHVFVV 684
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 250/641 (39%), Positives = 398/641 (62%), Gaps = 3/641 (0%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN + GHA A+K+Y M+ GL S TF +L + + G QIHGH+
Sbjct: 31 WNTMFRGHALSPDPVSALKLYVCMISLGLLPNS-YTFPFLLKSCAKLKASKEGLQIHGHV 89
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
LK G+ ++V + L+ MY + + DA + FD +++V Y ++TG RG +E +R
Sbjct: 90 LKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIESAR 149
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
+F + KD +SW MI+G ++ G +EA++LF+EM + D+ T +V++A
Sbjct: 150 NMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSG 209
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
++E G+Q+H++I + N+ + +AL+D Y KC ++ A +F +++K+V+SW ++
Sbjct: 210 SIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIG 269
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG--RSLVTGL 306
GY +EA+ +F M R+G P+D T+ S++ +CA+L +++ G H + G+
Sbjct: 270 GYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGV 329
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ ++ +L+ Y KCG+IE +H++FN M + +W A++ G+A G+AN D+F +
Sbjct: 330 TNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSR 389
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M + +KPD++T +G+LSACS AG+++ GRH F M Y I P +HY CMID+L +G
Sbjct: 390 MRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSG 449
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+EA+ I+ M PD + W +LL +C++HGNVE+G+ A++L +++P NP SYVLLS+
Sbjct: 450 LFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSN 509
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IYA+ G+W+ V+++R + +KG++K PGCS I+ S VH F D P + +IY LE+
Sbjct: 510 IYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEE 569
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
+ + + G+VPD S VL ++E K L HHSEKLAIAFGL+ P + +VKNLRV
Sbjct: 570 MEVLLQEAGFVPDTSEVLQEMEEEFKEGALRHHSEKLAIAFGLISTKPETKLTIVKNLRV 629
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C +CH ATK ISKI +REI+ RD RFH F++G CSC D+W
Sbjct: 630 CRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 670
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 178/362 (49%), Gaps = 35/362 (9%)
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
+F +++ + + W TM G + A+ L+ M GL + +TF +L +C L A
Sbjct: 19 VFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKA 78
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
+EG QIH +++ ++ +++V ++L+ MY + + ++ A VF + ++VVS+TA++ G
Sbjct: 79 SKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTG 138
Query: 250 YGQNGCSE-------------------------------EAVKIFCNMQRNGIEPDDFTL 278
Y G E EA+++F M + + PD+ T+
Sbjct: 139 YASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTM 198
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
+VIS+ A S+E G Q H G S + + NAL+ FY KCG +E + LF ++
Sbjct: 199 VTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSY 258
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR-- 396
+D +SW L+ GY E + LF++ML G P++VT++ +L AC+ G ++ GR
Sbjct: 259 KDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWI 318
Query: 397 HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRI 456
H + I + G+ T +ID+ S+ G +E A N M W ++ +
Sbjct: 319 HVY-IDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSM-LHKSLPAWNAMIFGFAM 376
Query: 457 HG 458
HG
Sbjct: 377 HG 378
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 203/435 (46%), Gaps = 75/435 (17%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTML-IMSSSRR--C 57
+P D VSWN +ISG+ G+ +A++++ M+K + R STM+ ++S+S R
Sbjct: 155 IPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNV----RPDESTMVTVISASARSGS 210
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
++LGRQ+H I GFGS + + + L+D Y+K G + A F L K+++ +N +I G
Sbjct: 211 IELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGG 270
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
+T + L +EA+ LF+EM G + + T
Sbjct: 271 ------------------------YTHL-------NLYKEALLLFQEMLRSGESPNDVTM 299
Query: 178 GSVLTACGGLLALEEGKQIHAFIIR--NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
S+L AC L A++ G+ IH +I + + + ++L+DMY KC I+ A VF +M
Sbjct: 300 LSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSM 359
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
K++ +W AM+ G+ +G + A IF M++N I+PDD T ++S+C++ L+ G
Sbjct: 360 LHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGR 419
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
F N + + +L + + D + + L F
Sbjct: 420 HI---------------------FRSMTHNYKITPKLEHYGCMIDLLGHSGL------FK 452
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
+A E I + ++PD V +L AC G VE G + + + K P Y
Sbjct: 453 EAEEMIS------TMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNP--GSY 504
Query: 416 TCMIDILSRAGRLEE 430
+ +I + AGR E
Sbjct: 505 VLLSNIYATAGRWNE 519
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 147/315 (46%), Gaps = 45/315 (14%)
Query: 223 KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
+ + YA SVF T+ N++ W M G+ + A+K++ M G+ P+ +T ++
Sbjct: 11 EGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLL 70
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
SCA L + +EG Q HG L G + V +L++ Y + +ED+H++F+ + RD V
Sbjct: 71 KSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVV 130
Query: 343 SWTALVSGYA-------------------------------KFGKANETIDLFEKMLSHG 371
S+TALV+GYA + G E ++LF++M+
Sbjct: 131 SYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTN 190
Query: 372 LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEA 431
++PDE T++ V+SA +R+G +E GR + ++G +ID S+ G +E A
Sbjct: 191 VRPDESTMVTVISASARSGSIELGRQVHS-WIADHGFGSNLKIVNALIDFYSKCGEMETA 249
Query: 432 KSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL--DPYNPASYVLLSSIYA 489
+ + D I W L+ + ++ + K A E+ +P +LS ++A
Sbjct: 250 CGLFLGLSY-KDVISWNILIGG---YTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHA 305
Query: 490 SK-------GKWDHV 497
G+W HV
Sbjct: 306 CAHLGAIDIGRWIHV 320
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 266/648 (41%), Positives = 376/648 (58%), Gaps = 34/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V WN +I G+ G + A +++ M G+ S IT ++++ + L
Sbjct: 191 MPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGI-KPSPITMTSLIQACGGIGNLKL 249
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +HG++L G G+ + V + VDMY+K+G I
Sbjct: 250 GKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDI--------------------------- 282
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
E +R +F M ++ +SW MI+G ++NGL E+ DLF + D T S+
Sbjct: 283 ----ESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSL 338
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C +L GK +H IR+ + N+ + +A+VD+Y KC S+K A VF M +NV
Sbjct: 339 LQGCSQTASLATGKILHGCAIRS-FESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNV 397
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
++WTAMLVG QNG +E+A+++F MQ GI + T S++ SCA+L SL+ G HG
Sbjct: 398 ITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGH 457
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALVSGYAKFGKANE 359
G I ALV Y KCG I + R+F+ ++ +D V W ++++GY G +
Sbjct: 458 LFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQ 517
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ ++ KM+ GLKP++ T + +LSACS + LVE+G F M +++ IRPI HY C++
Sbjct: 518 AVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLV 577
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+LSRAGR EEA++ I KMPF P LLS CR H N+ +G ++ LL LD NP
Sbjct: 578 DLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPG 637
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
Y++LS+IYA +WD V +R MR +G++K PG S ++ + VH F A D S P ++
Sbjct: 638 IYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEE 697
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY LE L + GYVPD S VL DV+ K++ML HSE+LAIAFGLL P G IR
Sbjct: 698 IYHFLESLRSAVETSGYVPDTSCVLRDVDEEMKVRMLWGHSERLAIAFGLLTTPAGSLIR 757
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ KNLRVC DCH TKYISKI +REI+VRDA RFH F NGECSCGD+W
Sbjct: 758 ITKNLRVCGDCHTVTKYISKIVKREIIVRDANRFHHFSNGECSCGDYW 805
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 215/415 (51%), Gaps = 18/415 (4%)
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
EKN + ++MI+ L++ G + E++R+F GM +KD + W ++I G +Q G A LF E
Sbjct: 162 EKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFE 221
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M G+ T S++ ACGG+ L+ GK +H +++ +++ V ++ VDMY K
Sbjct: 222 MHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGD 281
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
I+ A VF M +N+VSW AM+ G +NG E+ +F + R+ D T+ S++
Sbjct: 282 IESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQG 341
Query: 285 CANLASLEEGTQFHG---RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE 341
C+ ASL G HG RS + LI +S A+V Y KCG+++ + +FN M R+
Sbjct: 342 CSQTASLATGKILHGCAIRSFESNLI----LSTAIVDLYSKCGSLKQATFVFNRMKDRNV 397
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR----H 397
++WTA++ G A+ G A + + LF +M G+ + VT + ++ +C+ G +++GR H
Sbjct: 398 ITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGH 457
Query: 398 YFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIH 457
F + G + T ++D+ ++ G++ A+ + D + W ++++ +H
Sbjct: 458 LFRL-----GFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMH 512
Query: 458 GNVEIGKWAAESLLE--LDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVR 510
G+ ++E L P LLS+ S+ +S R+ +R
Sbjct: 513 GHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIR 567
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/430 (27%), Positives = 199/430 (46%), Gaps = 35/430 (8%)
Query: 33 LKDGLGN-LSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLG 91
LKDG N L I + + ++ S + + + H I+ + FV + LV Y+ L
Sbjct: 19 LKDGQFNQLPTIIHNFLSLLRESSKNLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLR 78
Query: 92 LIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQ 151
+ A+ FD+ + ++ N M+ G L Q
Sbjct: 79 SLEAARYVFDQFFQPKGLLCNAMLCGYL-------------------------------Q 107
Query: 152 NGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFV 211
+G RE ++LF MR L +D + L AC L E G +I + + + N FV
Sbjct: 108 SGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFV 167
Query: 212 GSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGI 271
GS+++ K I A+ VF M K+VV W +++ GY Q GC + A ++F M +GI
Sbjct: 168 GSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGI 227
Query: 272 EPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHR 331
+P T+ S+I +C + +L+ G HG L GL + I V + V Y K G+IE +
Sbjct: 228 KPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARW 287
Query: 332 LFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGL 391
+F +M R+ VSW A++SG + G E+ DLF +++ D T++ +L CS+
Sbjct: 288 VFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTAS 347
Query: 392 VEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
+ G+ ++ + I T ++D+ S+ G L++A N+M + I W +L
Sbjct: 348 LATGKILHGCAIRSFESNLILS--TAIVDLYSKCGSLKQATFVFNRMK-DRNVITWTAML 404
Query: 452 SSCRIHGNVE 461
+G+ E
Sbjct: 405 VGLAQNGHAE 414
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 259/685 (37%), Positives = 400/685 (58%), Gaps = 44/685 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG--- 61
D V N ++S A AV V++ +L G G+L +S ++S+ + +L
Sbjct: 126 DTVLHNAMMSAFARASLAAPAVSVFHALL--GSGSLRPDDYSFTALISAVGQMHNLAAPH 183
Query: 62 -RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLI---YDAKRGFDELPEKNIVMYNTMITG 117
Q+H +LK G + + V + L+ +Y K +DA++ DE+P+K+ + + TM+ G
Sbjct: 184 CTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVG 243
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
+RRG V +R +F + K + W MI+G +Q+G+ +A +LFR M E + +D+FTF
Sbjct: 244 YVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTF 303
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDH----KDNVFVGSALVDMYCKCKSIKYAESVFR 233
SVL+AC GK +H IIR + + V +ALV +Y K I A+ +F
Sbjct: 304 TSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFD 363
Query: 234 TMAWKNVVSWTAMLVGYGQNGC-------------------------------SEEAVKI 262
TM K+VVSW +L GY +GC SE+A+K+
Sbjct: 364 TMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKL 423
Query: 263 FCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGK 322
F M+ ++P D+T I++C L +L+ G Q H + G + + NAL+T Y K
Sbjct: 424 FNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAK 483
Query: 323 CGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGV 382
CG + D+ +F M D VSW A++S + G E ++LF++M++ G+ PD ++ + +
Sbjct: 484 CGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTI 543
Query: 383 LSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPP 442
L+AC+ AGLV++G HYFE M +++GI P DHY +ID+L R+GR+ EA+ I MPF P
Sbjct: 544 LTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEP 603
Query: 443 DAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRR 502
W +LS CR +G++E G +AA+ L + P + +Y+LLS+ Y++ G+W +++R+
Sbjct: 604 TPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRK 663
Query: 503 TMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSS 562
MR++GV+K+PGCSWI+ S++H+F D P + ++Y LE + +M K GYVPD
Sbjct: 664 LMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKF 723
Query: 563 VLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQ 622
VLHD+E EK +L HSEKLA+ FGLL +PPG + V+KNLR+C DCH A ++SK
Sbjct: 724 VLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVG 783
Query: 623 REILVRDAVRFHLFKNGECSCGDFW 647
REI+VRD RFH FK+GECSCG++W
Sbjct: 784 REIVVRDVRRFHHFKDGECSCGNYW 808
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/434 (23%), Positives = 185/434 (42%), Gaps = 76/434 (17%)
Query: 100 FDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKD--KDSISWTTMITGLMQNGLERE 157
F P+ V +++ G + ++ F + +D++ M++ + L
Sbjct: 86 FRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAP 145
Query: 158 AIDLFREMRLEG-LAMDQFTFGSVLTACGGL--LALEEGKQIHAFIIRNDHKDNVFVGSA 214
A+ +F + G L D ++F ++++A G + LA Q+H ++++ + V +A
Sbjct: 146 AVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNA 205
Query: 215 LVDMYCKCKS----------------------------------IKYAESVFRTMAWKNV 240
L+ +Y KC + + A SVF + K
Sbjct: 206 LIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFD 265
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V W AM+ GY Q+G +A ++F M + D+FT SV+S+CAN G HG+
Sbjct: 266 VVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQ 325
Query: 301 --SLVTGLI--SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTA---------- 346
L + + + V+NALVT Y K G I + R+F+ MN++D VSW
Sbjct: 326 IIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGC 385
Query: 347 ---------------------LVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+VSGY G + + + LF +M + +KP + T G ++A
Sbjct: 386 LDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAA 445
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
C G ++ GR +V + G + ++ + ++ G + +A+ MP D++
Sbjct: 446 CGELGALKHGRQLHAHLV-QCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMP-NLDSV 503
Query: 446 GWATLLSSCRIHGN 459
W ++S+ HG+
Sbjct: 504 SWNAMISALGQHGH 517
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 117/259 (45%), Gaps = 40/259 (15%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP+ + +SW +++SG+ G DA+K++N M + + T++ + +
Sbjct: 396 MPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCD-YTYAGAIAACGELGALKH 454
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H H+++ GF + G+ L+ MYAK G + DA+ F +P + V +N MI+ L +
Sbjct: 455 GRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQ 514
Query: 121 RGLVEESRRLFRGMK----DKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
G E+ LF M D D IS+ T++T GL E F M+ +
Sbjct: 515 HGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRD-------- 566
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
FG + G+ DH + L+D+ + I A + +TM
Sbjct: 567 FG-----------ISPGE---------DHY------ARLIDLLGRSGRIGEARDLIKTMP 600
Query: 237 WKNVVS-WTAMLVGYGQNG 254
++ S W A+L G NG
Sbjct: 601 FEPTPSIWEAILSGCRTNG 619
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 93/207 (44%), Gaps = 19/207 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN +IS HG +A+++++ M+ +G+ + RI+F T+L + VD
Sbjct: 497 MPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGI-DPDRISFLTILTACNHAGLVDE 555
Query: 61 GRQIHGHILK-FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITGL 118
G + + FG + L+D+ + G I +A+ +P E ++ +++G
Sbjct: 556 GFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGC 615
Query: 119 LRRGLVE----ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
G +E + +LFR + D ++ + G +A + + MR G+ +
Sbjct: 616 RTNGDMEFGAYAADQLFRMIPQHDG-TYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEP 674
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFII 201
G +E G +IH F++
Sbjct: 675 -----------GCSWIEVGSKIHVFLV 690
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 247/641 (38%), Positives = 403/641 (62%), Gaps = 3/641 (0%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN + GHA A+ +Y M+ GL + TF +L + + G+QIHGH+
Sbjct: 71 WNTMFRGHALSSDPVSALYLYVCMISLGLLP-NCYTFPFLLKSCAKSKAFREGQQIHGHV 129
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
LK G+ ++V + L+ MY + G + DA++ FD+ +++V Y +ITG +G + ++
Sbjct: 130 LKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQ 189
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
++F + KD +SW MI+G + G +EA++LF+EM + D+ T SV++AC
Sbjct: 190 KMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSA 249
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
++E G+Q+H++I + N+ + +AL+D+Y KC ++ A +F +++K+V+SW ++
Sbjct: 250 SIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIG 309
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG--RSLVTGL 306
GY +EA+ +F M R+G P+D T+ S++ +CA+L ++E G H + G+
Sbjct: 310 GYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGV 369
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ + +L+ Y KCG+IE + ++F+ + R SW A++ G+A G+AN D+F +
Sbjct: 370 ANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSR 429
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M + ++PD++T +G+LSACS +G+++ GRH F M ++Y I P +HY CMID+L +G
Sbjct: 430 MRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSG 489
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+EA+ IN M PD + W +LL +C+++ NVE+G+ A++L++++P NP SYVLLS+
Sbjct: 490 LFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSN 549
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IYA+ G+W+ V+++R + +KG++K PGCS I+ S VH F D P + +IY LE+
Sbjct: 550 IYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEE 609
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
+ + + G+VPD S VL ++E K L HHSEKLAIAFGL+ PG + +VKNLRV
Sbjct: 610 MEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRV 669
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C +CH ATK ISKI +REI+ RD RFH F++G CSC D+W
Sbjct: 670 CRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 202/412 (49%), Gaps = 38/412 (9%)
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
+F +++ + + W TM G + A+ L+ M GL + +TF +L +C A
Sbjct: 59 VFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKA 118
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA---- 245
EG+QIH +++ + +++V ++L+ MY + ++ A VF + ++VVS+TA
Sbjct: 119 FREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITG 178
Query: 246 ---------------------------MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
M+ GY + G ++EA+++F M + + PD+ T+
Sbjct: 179 YASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTM 238
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
SV+S+CA AS+E G Q H G S + + NAL+ Y KCG +E + LF ++
Sbjct: 239 VSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSY 298
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR-- 396
+D +SW L+ GY E + LF++ML G P++VT++ +L AC+ G +E GR
Sbjct: 299 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWI 358
Query: 397 HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRI 456
H + I + G+ H T +ID+ ++ G +E A+ + + W ++ +
Sbjct: 359 HVY-INKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSI-LNRSLSSWNAMIFGFAM 416
Query: 457 HG--NVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMRE 506
HG N ++ E++P + ++V L S + G D + R+M+E
Sbjct: 417 HGRANAAFDIFSRMRKNEIEP-DDITFVGLLSACSHSGMLDLGRHIFRSMKE 467
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 203/437 (46%), Gaps = 79/437 (18%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSS---RRC 57
+P D VSWN +ISG+A G+ +A++++ M+K + R STM+ + S+
Sbjct: 195 IPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNV----RPDESTMVSVVSACAQSAS 250
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
++LGRQ+H I GFGS + + + L+D+Y K G + A F+ L K+++ +NT+I G
Sbjct: 251 IELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGG 310
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
+T M L +EA+ LF+EM G + + T
Sbjct: 311 ------------------------YTHM-------NLYKEALLLFQEMLRSGESPNDVTM 339
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGS----ALVDMYCKCKSIKYAESVFR 233
S+L AC L A+E G+ IH +I N V S +L+DMY KC I+ A+ VF
Sbjct: 340 LSILPACAHLGAIEIGRWIHVYI--NKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFD 397
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE 293
++ +++ SW AM+ G+ +G + A IF M++N IEPDD T ++S+C++ L+
Sbjct: 398 SILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDL 457
Query: 294 GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK 353
GR + + ++ L YG ++ LF E
Sbjct: 458 -----GRHIFRSMKEDYKITPKL-EHYGCMIDLLGHSGLFKE------------------ 493
Query: 354 FGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
A E I+ E ++PD V +L AC VE G Y + ++K P
Sbjct: 494 ---AEEMINTME------MEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNP--G 542
Query: 414 HYTCMIDILSRAGRLEE 430
Y + +I + AGR E
Sbjct: 543 SYVLLSNIYATAGRWNE 559
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 146/308 (47%), Gaps = 41/308 (13%)
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS----IKYAESVFRT 234
S+L C L +L + IHA +I+ + + S L++ +C + YA SVF T
Sbjct: 7 SLLHNCKTLQSL---RMIHAQMIKTGLHNTNYALSKLIE-FCVLSPHFDGLPYAISVFET 62
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
+ N++ W M G+ + A+ ++ M G+ P+ +T ++ SCA + EG
Sbjct: 63 IQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREG 122
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL------- 347
Q HG L G + V +L++ Y + G +ED+ ++F++ + RD VS+TAL
Sbjct: 123 QQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASK 182
Query: 348 ------------------------VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVL 383
+SGYA+ G E ++LF++M+ ++PDE T++ V+
Sbjct: 183 GYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVV 242
Query: 384 SACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPD 443
SAC+++ +E GR + ++G +ID+ + G +E A + + D
Sbjct: 243 SACAQSASIELGRQVHS-WIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSY-KD 300
Query: 444 AIGWATLL 451
I W TL+
Sbjct: 301 VISWNTLI 308
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 260/651 (39%), Positives = 399/651 (61%), Gaps = 36/651 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+W L+I+ G DAV ++ M+ G R T S ++ + + L
Sbjct: 105 MPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVP-DRFTLSGVVSACAEMGLLSL 163
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKL---GLIYDAKRGFDELPEKNIVMYNTMITG 117
GRQ H ++K G V VG LVDMYAK G + DA++ FD +P ++N M
Sbjct: 164 GRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMP-----VHNVM--- 215
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNG-LEREAIDLFREMRLEGLAMDQFT 176
SWT +ITG +Q+G +REAI+LF EM + + FT
Sbjct: 216 -----------------------SWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFT 252
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
F SVL AC L + G+Q++A +++ VG++L+ MY +C +++ A F +
Sbjct: 253 FSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLF 312
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
KN+VS+ ++ Y ++ SEEA ++F ++ G + FT S++S +++ ++ +G Q
Sbjct: 313 EKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQ 372
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H R L +G S + + NAL++ Y +CGNIE + ++FNEM + +SWT++++G+AK G
Sbjct: 373 IHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGF 432
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
A ++ F KML G+ P+EVT I VLSACS GL+ +G +F+ M E+GI P +HY
Sbjct: 433 ATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYA 492
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY 476
C++D+L R+G LEEA +N MPF DA+ T L +CR+HGN+++GK AAE +LE DP+
Sbjct: 493 CVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDPH 552
Query: 477 NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPY 536
+PA+Y+LLS+++AS G+W+ V+++R+ M+E+ + K+ GCSWI+ +++VH F D S P
Sbjct: 553 DPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKVHKFYVGDTSHPQ 612
Query: 537 SDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGL 596
+ +IY EL++L K+ + GY+P VLHDVE +K + L HSEK+A+A+G +
Sbjct: 613 AQEIYDELDQLALKIKELGYIPSTDFVLHDVEEEQKEQYLFQHSEKIAVAYGFISTSTSR 672
Query: 597 PIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
PIRV KNLRVC DCH A KY S + ++EI++RDA RFH FK+G CSC D+W
Sbjct: 673 PIRVFKNLRVCGDCHTAFKYFSIVRRKEIVLRDANRFHHFKDGTCSCNDYW 723
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 143/460 (31%), Positives = 234/460 (50%), Gaps = 40/460 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW+ LIS +A++ +A+ + ML+ G + F+ + S++ + LG+ I
Sbjct: 6 DLVSWSALISCYANNEKAFEAISAFFDMLECGF-YPNEYCFTGVFRACSNKENISLGKII 64
Query: 65 HGHILKFG-FGSYVFVGSPLVDMYAK-LGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
G +LK G F S V VG L+DM+ K G + A + FD +P++N+V + M
Sbjct: 65 FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLM-------- 116
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
IT Q G R+A+DLF +M L G D+FT V++
Sbjct: 117 -----------------------ITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVS 153
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC---KSIKYAESVFRTMAWKN 239
AC + L G+Q H ++++ +V VG +LVDMY KC S+ A VF M N
Sbjct: 154 ACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHN 213
Query: 240 VVSWTAMLVGYGQN-GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
V+SWTA++ GY Q+ GC EA+++F M + ++P+ FT SV+ +CANL+ + G Q +
Sbjct: 214 VMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVY 273
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
+ L S V N+L++ Y +CGN+E++ + F+ + ++ VS+ +V+ YAK +
Sbjct: 274 ALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSE 333
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
E +LF ++ G + T +LS S G + KG ++K G + +
Sbjct: 334 EAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKS-GFKSNLHICNAL 392
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
I + SR G +E A N+M + I W ++++ HG
Sbjct: 393 ISMYSRCGNIEAAFQVFNEMG-DGNVISWTSMITGFAKHG 431
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 177/323 (54%), Gaps = 8/323 (2%)
Query: 137 KDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQI 196
+D +SW+ +I+ N EAI F +M G +++ F V AC + GK I
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64
Query: 197 HAFIIRNDH-KDNVFVGSALVDMYCKCK-SIKYAESVFRTMAWKNVVSWTAMLVGYGQNG 254
F+++ + + +V VG AL+DM+ K ++ A VF M +NVV+WT M+ + Q G
Sbjct: 65 FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLG 124
Query: 255 CSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSN 314
S +AV +F +M +G PD FTL V+S+CA + L G QFH + +GL + V
Sbjct: 125 FSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGC 184
Query: 315 ALVTFYGKC---GNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN-ETIDLFEKMLSH 370
+LV Y KC G+++D+ ++F+ M V + +SWTA+++GY + G + E I+LF +M+
Sbjct: 185 SLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQG 244
Query: 371 GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEE 430
+KP+ T VL AC+ + G + ++VK + I+ +I + SR G +E
Sbjct: 245 QVKPNHFTFSSVLKACANLSDIWLGEQVYALVVK-MRLASINCVGNSLISMYSRCGNMEN 303
Query: 431 AKSFINKMPFPPDAIGWATLLSS 453
A+ + + F + + + T++++
Sbjct: 304 ARKAFDVL-FEKNLVSYNTIVNA 325
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 127/245 (51%), Gaps = 17/245 (6%)
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
+++VSW+A++ Y N + EA+ F +M G P+++ V +C+N ++ G
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64
Query: 298 HGRSLVTGLI-SFITVSNALVTFYGKC-GNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
G L TG S + V AL+ + K G++E ++++F+ M R+ V+WT +++ + + G
Sbjct: 65 FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLG 124
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE-------YGI 408
+ + +DLF M+ G PD TL GV+SAC+ GL+ GR + +++K G
Sbjct: 125 FSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGC 184
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
+ + C+ D G +++A+ ++MP + + W +++ G + + A E
Sbjct: 185 SLVDMYAKCVAD-----GSVDDARKVFDRMPV-HNVMSWTAIITGYVQSGGCD--REAIE 236
Query: 469 SLLEL 473
LE+
Sbjct: 237 LFLEM 241
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
Query: 337 NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR 396
N RD VSW+AL+S YA KA E I F ML G P+E GV ACS + G+
Sbjct: 3 NKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGK 62
Query: 397 HYFEIMVKEYGIRPIHDHYTCMIDILSRA-GRLEEAKSFINKMPFPPDAIGWATLLS 452
F ++K +ID+ + G LE A ++MP + + W +++
Sbjct: 63 IIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMP-DRNVVTWTLMIT 118
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 250/647 (38%), Positives = 392/647 (60%), Gaps = 32/647 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+ D ++N+++ G+A G A +++ M + GL ++I+F ++L + +
Sbjct: 219 LHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGL-KPNKISFLSILDGCWTPEALAW 277
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +H + G + V + L+ MY G I
Sbjct: 278 GKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSI--------------------------- 310
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
E +RR+F MK +D +SWT MI G +NG +A LF M+ EG+ D+ T+ +
Sbjct: 311 ----EGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHI 366
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ AC L ++IH+ + ++ V +ALV MY KC +IK A VF M ++V
Sbjct: 367 MNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDV 426
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW+AM+ Y +NG EA + F M+R+ IEPD T +++++C +L +L+ G + + +
Sbjct: 427 VSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQ 486
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ L+S + + NAL+ K G++E + +F+ M RD ++W A++ GY+ G A E
Sbjct: 487 AIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREA 546
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LF++ML +P+ VT +GVLSACSRAG V++GR +F +++ GI P Y CM+D
Sbjct: 547 LYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVD 606
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG L+EA+ I MP P + W++LL +CRIHGN+++ + AAE L +DPY+ A
Sbjct: 607 LLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAV 666
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YV LS +YA+ G W++V+++R+ M +G+RK+ GC+WI+ +VH F +D S P +I
Sbjct: 667 YVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEI 726
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
YAEL +L + +EGY+P +VLHDV +K + +++HSEKLAIA+G+L +P G PIR+
Sbjct: 727 YAELARLMNAIKREGYIPITQNVLHDVGEQQKEEAISYHSEKLAIAYGVLSLPSGTPIRI 786
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVCSDCH+A+K+ISK+T REI+ RDA RFH FK+G CSCGD+W
Sbjct: 787 YKNLRVCSDCHSASKFISKVTGREIIARDASRFHHFKDGVCSCGDYW 833
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/485 (30%), Positives = 246/485 (50%), Gaps = 39/485 (8%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V+WN LI+G+A G V +A ++ M+ +GL S ITF ++L SS ++ G+++H
Sbjct: 124 VTWNALIAGYAQVGHVKEAFALFRQMVDEGL-EPSIITFLSVLDACSSPAGLNWGKEVHA 182
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++ GF S +G+ LV MY K G + DA++ FD L +++ +N M+ G + G
Sbjct: 183 QVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSG---- 238
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
W +A +LF M+ GL ++ +F S+L C
Sbjct: 239 --------------DW-------------EKAFELFYRMQQVGLKPNKISFLSILDGCWT 271
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
AL GK +HA + D++ V ++L+ MY C SI+ A VF M ++VVSWT M
Sbjct: 272 PEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVM 331
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ GY +NG E+A +F MQ GI+PD T ++++CA A+L + H + + G
Sbjct: 332 IEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGF 391
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ + VS ALV Y KCG I+D+ ++F+ M RD VSW+A++ Y + G E + F
Sbjct: 392 GTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHL 451
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR--PIHDHYTCMIDILSR 424
M ++PD VT I +L+AC G ++ G + +K + P+ + +I + ++
Sbjct: 452 MKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGN---ALIIMNAK 508
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
G +E A+ + M D I W ++ +HGN + + +L+ + + P S +
Sbjct: 509 HGSVERARYIFDTM-VRRDVITWNAMIGGYSLHGNAREALYLFDRMLK-ERFRPNSVTFV 566
Query: 485 SSIYA 489
+ A
Sbjct: 567 GVLSA 571
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 191/348 (54%), Gaps = 4/348 (1%)
Query: 107 NIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR 166
NI NT+I G V E+R++F +++K ++W +I G Q G +EA LFR+M
Sbjct: 91 NIYELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMV 150
Query: 167 LEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIK 226
EGL TF SVL AC L GK++HA ++ + +G+ALV MY K S+
Sbjct: 151 DEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMD 210
Query: 227 YAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCA 286
A VF + ++V ++ M+ GY ++G E+A ++F MQ+ G++P+ + S++ C
Sbjct: 211 DARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCW 270
Query: 287 NLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTA 346
+L G H + + GL+ I V+ +L+ Y CG+IE + R+F+ M VRD VSWT
Sbjct: 271 TPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTV 330
Query: 347 LVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH-YFEIMVKE 405
++ GYA+ G + LF M G++PD +T + +++AC+ + + R + ++ +
Sbjct: 331 MIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAG 390
Query: 406 YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+G + T ++ + ++ G +++A+ + MP D + W+ ++ +
Sbjct: 391 FGTDLLVS--TALVHMYAKCGAIKDARQVFDAMP-RRDVVSWSAMIGA 435
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 166/337 (49%), Gaps = 35/337 (10%)
Query: 158 AIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVD 217
A D+ + + G +D T+ + C L GKQ+ II+ + N++ + L+
Sbjct: 41 ANDVLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIK 100
Query: 218 MYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFT 277
+Y C ++ A +F ++ K VV+W A++ GY Q G +EA +F M G+EP T
Sbjct: 101 LYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIIT 160
Query: 278 LGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN 337
SV+ +C++ A L G + H + + G +S + ALV+ Y K G+++D+ ++F+ ++
Sbjct: 161 FLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLH 220
Query: 338 VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVL-------------- 383
+RD ++ +V GYAK G + +LF +M GLKP++++ + +L
Sbjct: 221 IRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKA 280
Query: 384 --SACSRAGLVEKGRHYFEIMVKEY-------GIRPIHDH--------YTCMIDILSRAG 426
+ C AGLV+ R +++ Y G R + D+ +T MI+ + G
Sbjct: 281 VHAQCMNAGLVDDIR-VATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENG 339
Query: 427 RLEEAKSFINKMP---FPPDAIGWATLLSSCRIHGNV 460
+E+A M PD I + ++++C I N+
Sbjct: 340 NIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANL 376
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 261/647 (40%), Positives = 384/647 (59%), Gaps = 31/647 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +SWN +IS A ++V ++ +L +GL S + SS +++
Sbjct: 965 MKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNI 1024
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
RQIH H LK G + FV + L+D+Y+K
Sbjct: 1025 SRQIHVHALKTGNIADSFVATTLIDVYSK------------------------------- 1053
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G +EE+ LF+ D D W M+ G + ++A++LF + G DQ T +
Sbjct: 1054 SGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATA 1113
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
ACG L+ L++GKQIHA I+ ++ V S ++DMY KC + A VF ++ +
Sbjct: 1114 AKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDD 1173
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+WT+M+ G NG ++A++I+ M+++ + PD++T ++I + + + +LE+G Q H
Sbjct: 1174 VAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHAN 1233
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ +S V +LV Y KCGNIED++RLF +MNVR+ W A++ G A+ G A E
Sbjct: 1234 VIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEA 1293
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++LF+ M SHG++PD V+ IG+LSACS AGL + Y M +YGI P +HY+C++D
Sbjct: 1294 VNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVD 1353
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
L RAG ++EA I MPF A LL +CRI G+VE GK A L L+P++ A+
Sbjct: 1354 ALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAA 1413
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS+IYA+ +WD V+ R+ M+ K V+KDPG SWI K+ +H+F DD S P +D I
Sbjct: 1414 YVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADII 1473
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y ++E++ + + ++GYVPD VL DVE EK + L +HSEKLAIA+GL+ P IRV
Sbjct: 1474 YDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRV 1533
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+KNLRVC DCHNA KYISK+ +REI++RDA RFH F++G CSCGD+W
Sbjct: 1534 IKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 1580
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 214/422 (50%), Gaps = 38/422 (9%)
Query: 43 ITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDE 102
+T +L + ++LG+Q+HG +K G S V V + LV+MY+K+G Y A
Sbjct: 905 VTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFA------ 958
Query: 103 LPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLF 162
R +F MK D ISW +MI+ Q+ LE E+++LF
Sbjct: 959 -------------------------REVFNDMKHLDLISWNSMISSCAQSSLEEESVNLF 993
Query: 163 REMRLEGLAMDQFTFGSVLTACGGLL-ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK 221
++ EGL D FT SVL AC L+ L +QIH ++ + + FV + L+D+Y K
Sbjct: 994 IDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSK 1053
Query: 222 CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
++ AE +F+ ++ W AM+ GY ++A+++F + ++G + D TL +
Sbjct: 1054 SGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATA 1113
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE 341
+C L L++G Q H ++ G S + V++ ++ Y KCG++ ++ +FN ++ D+
Sbjct: 1114 AKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDD 1173
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEI 401
V+WT+++SG G ++ + ++ +M + PDE T ++ A S +E+GR
Sbjct: 1174 VAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHAN 1233
Query: 402 MVKEYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
++K + + D + T ++D+ ++ G +E+A KM A+ W +L HGN
Sbjct: 1234 VIK---LDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIAL-WNAMLVGLAQHGN 1289
Query: 460 VE 461
E
Sbjct: 1290 AE 1291
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 130/450 (28%), Positives = 209/450 (46%), Gaps = 79/450 (17%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNL----MLKDGLGNLSRITFSTMLIMSSSRRC 57
P D V+WN ++ +A+ ND L +L+ LG+ +R+T + +L + + C
Sbjct: 683 PERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGC 742
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
+ +HG+ +K G VFV LV++Y+K G + DA
Sbjct: 743 LWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDA--------------------- 781
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
R LF M+++D + W M+ G +Q GLE+EA LF E GL D+F+
Sbjct: 782 ----------RLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSV 831
Query: 178 GSVLTACGGLLALEEGK----QIHAFIIR---NDHKDNVFVGSALVDMYCKCKSIKYAES 230
+L + +EGK Q+ A+ + +D +VF C + K +E
Sbjct: 832 QLILNGVSEV-NWDEGKWLADQVQAYAAKLSLSDDNPDVF-----------CWNKKLSEC 879
Query: 231 VFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS 290
++ W A++ F NM I+ D TL V+++ A
Sbjct: 880 LWAGDNWG--------------------AIECFVNMNGLNIDYDAVTLLVVLAAVAGTDD 919
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
LE G Q HG ++ +GL S ++V+N+LV Y K G + +FN+M D +SW +++S
Sbjct: 920 LELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISS 979
Query: 351 YAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP 410
A+ E+++LF +L GLKPD TL VL ACS L++ +I V
Sbjct: 980 CAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACS--SLIDGLNISRQIHVHALKTGN 1037
Query: 411 IHDHY--TCMIDILSRAGRLEEAKS-FINK 437
I D + T +ID+ S++G++EEA+ F NK
Sbjct: 1038 IADSFVATTLIDVYSKSGKMEEAEFLFQNK 1067
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 175/397 (44%), Gaps = 57/397 (14%)
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
LG+ H I+ G F+ + L+ MY+K G + A++ FD PE+++V +N ++
Sbjct: 639 LGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGA-- 696
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ D + +G +E + LFR +R + + T
Sbjct: 697 -----------YAASVDSN-------------DGNAQEGLHLFRLLRASLGSTTRMTLAP 732
Query: 180 VLTAC--GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
VL C G L EG +H + I+ + +VFV ALV++Y KC ++ A +F M
Sbjct: 733 VLKLCLNSGCLWAAEG--VHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRE 790
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
++VV W ML GY Q G +EA ++F R+G+ PD+F++ +++ + + + +EG
Sbjct: 791 RDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEV-NWDEGKW- 848
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
+++ + + K +D+ +F W +S G
Sbjct: 849 --------------LADQVQAYAAKLSLSDDNPDVF---------CWNKKLSECLWAGDN 885
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
I+ F M + D VTL+ VL+A + +E G+ I VK G+
Sbjct: 886 WGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKS-GLDSDVSVANS 944
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
++++ S+ G A+ N M D I W +++SSC
Sbjct: 945 LVNMYSKMGCAYFAREVFNDMKH-LDLISWNSMISSC 980
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 294 GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK 353
G H R +V+G +SN L+T Y KCG++ + ++F+ RD V+W A++ YA
Sbjct: 640 GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 699
Query: 354 F-----GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLV--EKGRHYFEIMVKEY 406
G A E + LF + + +TL VL C +G + +G H + I +
Sbjct: 700 SVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKI--- 756
Query: 407 GIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
G+ +++I S+ GR+ +A+ + M D + W +L G V++G
Sbjct: 757 GLEWDVFVSGALVNIYSKCGRMRDARLLFDWMR-ERDVVLWNMMLK-----GYVQLG 807
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Cucumis sativus]
Length = 1037
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 268/641 (41%), Positives = 396/641 (61%), Gaps = 32/641 (4%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V WN+++ + +++D+ +++ M +G+ ++ T+ ++L +S + LG QIH
Sbjct: 429 VLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIP-NQFTYPSILRTCTSLGALYLGEQIHT 487
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
H++K GF V+V S L+DMYAK G + A R LPE ++V
Sbjct: 488 HVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVV----------------- 530
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
SWT MI G +Q+ + EA+ LF EM G+ D F S ++AC G
Sbjct: 531 --------------SWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAG 576
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+ AL +G+QIHA ++ + +AL+ +Y +C I+ A F + KN +SW ++
Sbjct: 577 IRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSL 636
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ G Q+G EEA+++F M R E + FT GS IS+ A+LA++++G Q H L TG
Sbjct: 637 VSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGY 696
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
S VSN+L++ Y K G+I D+ R FN+M+ R+ +SW A+++GY++ G E + LFE+
Sbjct: 697 DSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEE 756
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M G+ P+ VT +GVLSACS GLV++G YFE M K + + P +HY C++D+L RAG
Sbjct: 757 MKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAG 816
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+L+ A +I +MP P DA+ W TLLS+C IH N+EIG+ AA LLEL+P + A+YVL+S+
Sbjct: 817 QLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISN 876
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IYA +W H R+ M+++GV+K+PG SWI+ K+ VH F A D P ++QIY +
Sbjct: 877 IYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGH 936
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
LNR+ + GYV D S+L++ E +K + + HSEKLAIAFGLL + +PIRV+KNLRV
Sbjct: 937 LNRRTSEIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRV 996
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C+DCHN KY+SKI+ R I+VRDA RFH F G CSC DFW
Sbjct: 997 CNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 132/458 (28%), Positives = 237/458 (51%), Gaps = 34/458 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M DGVS+N LISG G + A++++ M +D L IT +++L +S +
Sbjct: 322 MNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCL-KPDCITVASLLSACASVGALHK 380
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+H H +K G + + + L+D+Y+K + A + F +NIV++N M+
Sbjct: 381 GMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAY-- 438
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G D S ++ ++FR+M++EG+ +QFT+ S+
Sbjct: 439 ------------GQLDNLS-----------------DSFEIFRQMQMEGMIPNQFTYPSI 469
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C L AL G+QIH +I+ + NV+V S L+DMY K + A + R + +V
Sbjct: 470 LRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDV 529
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWTAM+ GY Q+ EA+++F M+ GI+ D+ S IS+CA + +L +G Q H +
Sbjct: 530 VSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQ 589
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
S G + ++++NAL++ Y +CG I++++ F ++ ++ +SW +LVSG A+ G E
Sbjct: 590 SYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEA 649
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ +F +ML + + T +SA + +++G+ +++K G + +I
Sbjct: 650 LQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKT-GYDSEREVSNSLIS 708
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ +++G + +A N M + I W +++ HG
Sbjct: 709 LYAKSGSISDAWREFNDMS-ERNVISWNAMITGYSQHG 745
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/459 (27%), Positives = 228/459 (49%), Gaps = 38/459 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+W +ISG + +G +A+ ++ M + + S++L S+ + +LG Q+
Sbjct: 225 DIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYV-LSSVLSASTKIQLFELGEQL 283
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H ++K+GF S +V + LV +Y++ R L+
Sbjct: 284 HCLVIKWGFHSETYVCNGLVALYSR------------------------------SRKLI 313
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ R+F M +D +S+ ++I+GL+Q G A++LF +M+ + L D T S+L+AC
Sbjct: 314 S-AERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSAC 372
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+ AL +G Q+H+ I+ ++ + +L+D+Y KC ++ A F T +N+V W
Sbjct: 373 ASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWN 432
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
MLV YGQ ++ +IF MQ G+ P+ FT S++ +C +L +L G Q H + T
Sbjct: 433 VMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKT 492
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G + V + L+ Y K G + + R+ + D VSWTA+++GY + +E + LF
Sbjct: 493 GFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLF 552
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY--GIRPIHDHYTCMIDIL 422
E+M G++ D + +SAC+ + +G+ +I + Y G +I +
Sbjct: 553 EEMEYRGIQFDNIGFASAISACAGIRALRQGQ---QIHAQSYAAGFGADLSINNALISLY 609
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+R GR++EA K+ + I W +L+S G E
Sbjct: 610 ARCGRIQEAYLAFEKIG-DKNNISWNSLVSGLAQSGYFE 647
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 224/453 (49%), Gaps = 49/453 (10%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCV------DLG 61
SWN +I + S ++ ML +G+ + TF+ +L + CV +
Sbjct: 126 SWNKMIHVFVAQKSNFQVFCLFRRMLAEGI-TPNGYTFAGVL-----KACVGGDIAFNYV 179
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+Q+H +GF S V + L+D+Y+K
Sbjct: 180 KQVHSRTFYYGFDSSPLVANLLIDLYSK-------------------------------N 208
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G +E ++++F + KD ++W MI+GL QNGLE EAI LF +M + + SVL
Sbjct: 209 GYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVL 268
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+A + E G+Q+H +I+ +V + LV +Y + + + AE +F TM ++ V
Sbjct: 269 SASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGV 328
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
S+ +++ G Q G S+ A+++F MQR+ ++PD T+ S++S+CA++ +L +G Q H +
Sbjct: 329 SYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHA 388
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ G+ + I + +L+ Y KC ++E +H+ F + V W ++ Y + +++
Sbjct: 389 IKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSF 448
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC--MI 419
++F +M G+ P++ T +L C+ G + G ++K G + + Y C +I
Sbjct: 449 EIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKT-GFQL--NVYVCSVLI 505
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
D+ ++ G+L A + ++P D + W +++
Sbjct: 506 DMYAKYGQLALALRILRRLP-EDDVVSWTAMIA 537
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 171/340 (50%), Gaps = 6/340 (1%)
Query: 96 AKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLE 155
+K GFD P ++ ++++ R G + ++F ++ SW MI +
Sbjct: 85 SKSGFDGEP----LLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSN 140
Query: 156 REAIDLFREMRLEGLAMDQFTFGSVLTAC-GGLLALEEGKQIHAFIIRNDHKDNVFVGSA 214
+ LFR M EG+ + +TF VL AC GG +A KQ+H+ + V +
Sbjct: 141 FQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANL 200
Query: 215 LVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD 274
L+D+Y K I+ A+ VF + K++V+W AM+ G QNG EEA+ +FC+M + I P
Sbjct: 201 LIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPT 260
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN 334
+ L SV+S+ + E G Q H + G S V N LV Y + + + R+F+
Sbjct: 261 PYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFS 320
Query: 335 EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEK 394
MN RD VS+ +L+SG + G ++ ++LF KM LKPD +T+ +LSAC+ G + K
Sbjct: 321 TMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHK 380
Query: 395 GRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSF 434
G +K G+ ++D+ S+ +E A F
Sbjct: 381 GMQLHSHAIKA-GMSADIILEGSLLDLYSKCADVETAHKF 419
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 146/323 (45%), Gaps = 11/323 (3%)
Query: 133 GMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEE 192
G + S TT+ M+ G + I L M G+ + + +L C +L E
Sbjct: 21 GATNSHSFDQTTL---HMEQGKSKR-IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFE 76
Query: 193 GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
++H I ++ + +LVD Y + A VF + ++V SW M+ +
Sbjct: 77 TMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVA 136
Query: 253 NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC-ANLASLEEGTQFHGRSLVTGLISFIT 311
+ + +F M GI P+ +T V+ +C + Q H R+ G S
Sbjct: 137 QKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPL 196
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG 371
V+N L+ Y K G IE + ++FN + ++D V+W A++SG ++ G E I LF M +
Sbjct: 197 VANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASE 256
Query: 372 LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC--MIDILSRAGRLE 429
+ P L VLSA ++ L E G +++K +G + Y C ++ + SR+ +L
Sbjct: 257 IFPTPYVLSSVLSASTKIQLFELGEQLHCLVIK-WGFHS--ETYVCNGLVALYSRSRKLI 313
Query: 430 EAKSFINKMPFPPDAIGWATLLS 452
A+ + M D + + +L+S
Sbjct: 314 SAERIFSTMN-SRDGVSYNSLIS 335
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 93/165 (56%), Gaps = 5/165 (3%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
+ +SWN L+SG A G +A++V+ ML+ ++ T+ + + ++S + G+QI
Sbjct: 629 NNISWNSLVSGLAQSGYFEEALQVFVRMLRTE-AEVNMFTYGSAISAAASLANIKQGQQI 687
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +LK G+ S V + L+ +YAK G I DA R F+++ E+N++ +N MITG + G
Sbjct: 688 HSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCG 747
Query: 125 EESRRLFRGMKD----KDSISWTTMITGLMQNGLEREAIDLFREM 165
E+ RLF MK + +++ +++ GL +E +D F M
Sbjct: 748 MEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESM 792
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 95/235 (40%), Gaps = 10/235 (4%)
Query: 260 VKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTF 319
+++ M+ G+ + ++ C SL E + H R +G + ++LV
Sbjct: 43 IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102
Query: 320 YGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTL 379
Y + G+ + ++F+E + R SW ++ + + LF +ML+ G+ P+ T
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162
Query: 380 IGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP 439
GVL AC + YG +ID+ S+ G +E AK N +
Sbjct: 163 AGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCIC 222
Query: 440 FPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN----PASYVLLSSIYAS 490
D + W ++S +G E LL D + P YVL S + AS
Sbjct: 223 M-KDIVTWVAMISGLSQNGLEE-----EAILLFCDMHASEIFPTPYVLSSVLSAS 271
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 261/651 (40%), Positives = 388/651 (59%), Gaps = 7/651 (1%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P W L ISG A G D ++ + ML +G + + ++ + V+ G
Sbjct: 72 PTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAGMGDVESG 131
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+++HG +L+ G V + + ++DMYAK G A+R F + E++ V +N I ++
Sbjct: 132 KRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIGACIQS 191
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G + S +LF +D+ SW T+I+GLM++G +A+ R M G+ + +T+ +
Sbjct: 192 GDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAF 251
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
G LL + G+Q+H ++ + + FV S+L+DMYCKC ++ A SVF W +
Sbjct: 252 VLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDH--WSPLT 309
Query: 242 -----SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
+W+ M+ GY QNG EEA+ +F M R G+ D FTL SV ++CAN+ +E+G Q
Sbjct: 310 RDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQ 369
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
HG +++A+V Y KCGN+ED+ +F+ ++ WT+++ YA G+
Sbjct: 370 VHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQ 429
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
I+LFE+M + + P+E+TL+GVLSACS GLV +G YF+ M +EYGI P +HY
Sbjct: 430 GRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYN 489
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY 476
C++D+ R+G L++AK+FI + +AI W TLLS+CR+H + E K A+E L++L+
Sbjct: 490 CIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLEQC 549
Query: 477 NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPY 536
+ SYV+LS+IYA+ KW +LR +M+E+ VRK PG SWI K+ VH F A D S P
Sbjct: 550 DAGSYVMLSNIYATNNKWHDTFELRVSMQERKVRKQPGRSWIHLKNTVHTFVAGDASHPQ 609
Query: 537 SDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGL 596
S +IYA LEKL ++ + GY V+HDVE ++ L HSEKLAIAFG++ P G
Sbjct: 610 SAEIYAYLEKLVERLKEIGYTSRTDLVVHDVEDEQRETALKFHSEKLAIAFGIISTPSGT 669
Query: 597 PIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
P+R+ KNLRVC DCH A KYIS T REI+VRD RFH FK+ CSC DFW
Sbjct: 670 PLRIFKNLRVCEDCHEAIKYISLATGREIVVRDLYRFHHFKDASCSCEDFW 720
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 193/438 (44%), Gaps = 68/438 (15%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR G L+ + + ++ + + +DA+ FDE P + ++ I+G R
Sbjct: 29 GRAARGGSLEARLATVPHERASVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCAR 88
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM-DQFTFGS 179
RG R GM+ F EM EG A + F +
Sbjct: 89 RG------RYADGMR-------------------------AFAEMLAEGEATPNAFVLAA 117
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
V+ C G+ +E GK++H +++RN +V + +A++DMY KC + A VF MA ++
Sbjct: 118 VVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERD 177
Query: 240 VV-------------------------------SWTAMLVGYGQNGCSEEAVKIFCNMQR 268
V SW ++ G ++G + +A+ M +
Sbjct: 178 AVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQ 237
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIED 328
G+ + +T + L + G Q HGR L+ L V ++L+ Y KCG +E
Sbjct: 238 AGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEA 297
Query: 329 SHRLFNEMN--VRD-EVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+ +F+ + RD +W+ +V+GY + G+ E +DLF +ML G+ D TL V +A
Sbjct: 298 AASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAA 357
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
C+ G+VE+GR + K + + + ++D+ ++ G LE+A+S ++ A+
Sbjct: 358 CANVGMVEQGRQVHGCVEKLW-YKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAV 416
Query: 446 GWATLLSSCRIHGNVEIG 463
W ++L S HG I
Sbjct: 417 -WTSMLCSYASHGQGRIA 433
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 99/227 (43%), Gaps = 16/227 (7%)
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
A L G G SL L + +++ F+ + D+ +F+E R WT +
Sbjct: 24 ALLLRGRAARGGSLEARLATVPHERASVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTI 83
Query: 349 SGYAKFGKANETIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYG 407
SG A+ G+ + + F +ML+ G P+ L V+ C+ G VE G+ M++
Sbjct: 84 SGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRN-- 141
Query: 408 IRPIH-DHYTC--MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
+H D C ++D+ ++ G+ E A+ M DA+ W + +C G++
Sbjct: 142 --GVHLDVVLCNAVLDMYAKCGQFERARRVFGAMA-ERDAVSWNIAIGACIQSGDI---- 194
Query: 465 WAAESLLELDPYNPASY--VLLSSIYASKGKWDHVSQLRRTMREKGV 509
+ L + P + ++S + S D +S LRR M + GV
Sbjct: 195 LGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRR-MAQAGV 240
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 252/646 (39%), Positives = 404/646 (62%), Gaps = 9/646 (1%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNL-SRITFSTMLIMSSSRRCVDLGRQIHGH 67
WN ++ GHAS A+++Y M+ LG+L + +F +L + + + GRQIH
Sbjct: 32 WNTMLRGHASSSDPVSALEMYVRMVS--LGHLPNSYSFPFLLKSCAKSKAFEEGRQIHAQ 89
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
+LK G G +V + L+ MYA+ G + DA++ FD +++V +ITG RG +
Sbjct: 90 VLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFRSA 149
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
R++F + ++D +SW MITG ++NG EA++LF+EM + D+ T SV++AC
Sbjct: 150 RKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQS 209
Query: 188 LALEEGKQIHAFIIR----NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
++E G+Q+H+++ + ++ + +AL+D+Y KC ++ A +F ++ K+VVSW
Sbjct: 210 GSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSW 269
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG--RS 301
++ GY +EA+ +F M R+G P+D TL SV+ +CA+L +++ G H
Sbjct: 270 NTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDK 329
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ G+ + ++ +L+ Y KCG+IE +H++FN M R SW A++ G+A G+AN
Sbjct: 330 KLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAF 389
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
DLF +M + ++PD++T +G+LSACS +GL++ GR F+ M ++Y + P +HY CMID+
Sbjct: 390 DLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDL 449
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
L +G +EA+ I+ MP PD + W +LL +C+ HGN+E+ + A+ L++++P N SY
Sbjct: 450 LGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSY 509
Query: 482 VLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIY 541
VLLS+IYA+ G+W+ V+++R + KG++K PGCS I+ S VH F D P +IY
Sbjct: 510 VLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIY 569
Query: 542 AELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVV 601
LE+++ ++ + G+ PD S VL ++E K L HHSEKLAIAFGL+ PG + +V
Sbjct: 570 HMLEEMDVQLEEAGFAPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIV 629
Query: 602 KNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC +CH ATK ISKI +REI+ RD RFH F++G CSC D+W
Sbjct: 630 KNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCCDYW 675
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 176/372 (47%), Gaps = 40/372 (10%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSWN +I+G+ +G +A++++ M++ + T +++ + ++LGRQ+
Sbjct: 160 DVVSWNAMITGYVENGRYEEALELFKEMMRTNV-RPDEGTLVSVVSACAQSGSIELGRQV 218
Query: 65 HGHI----LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
H + GF S + + + L+D+Y+K G + A F+ L K++V +NT+I
Sbjct: 219 HSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLI----- 273
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G L +EA+ LF+EM G + T SV
Sbjct: 274 --------------------------GGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSV 307
Query: 181 LTACGGLLALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
L AC L A++ G+ IH +I + + + ++L+DMY KC I+ A VF +M ++
Sbjct: 308 LPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYR 367
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-F 297
++ SW AM+ G+ +G + A +F M+ N +EPDD T ++S+C++ L+ G Q F
Sbjct: 368 SLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIF 427
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGK 356
+ L + ++ G G +++ + + M + D V W +L+ K G
Sbjct: 428 KSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGN 487
Query: 357 ANETIDLFEKML 368
+K++
Sbjct: 488 LELAESFAQKLI 499
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 126/261 (48%), Gaps = 35/261 (13%)
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ YA SVF T+ N++ W ML G+ + A++++ M G P+ ++ ++ S
Sbjct: 14 LPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKS 73
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
CA + EEG Q H + L G V +L++ Y + G +ED+ ++F+ + RD VS
Sbjct: 74 CAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSC 133
Query: 345 TALVSGYA-------------------------------KFGKANETIDLFEKMLSHGLK 373
TAL++GYA + G+ E ++LF++M+ ++
Sbjct: 134 TALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVR 193
Query: 374 PDEVTLIGVLSACSRAGLVEKGRH---YFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEE 430
PDE TL+ V+SAC+++G +E GR + + ++G +ID+ S+ G +E
Sbjct: 194 PDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVET 253
Query: 431 AKSFINKMPFPPDAIGWATLL 451
A + D + W TL+
Sbjct: 254 AFGLFEGLSC-KDVVSWNTLI 273
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 265/647 (40%), Positives = 380/647 (58%), Gaps = 33/647 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V WN +ISG+A +G A+ + M ++G IT ++L + R + +
Sbjct: 91 MPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEG-HRPDSITIVSILPAVADTRLLRI 149
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +HG++L+ GF S V V + LVDMY+K G
Sbjct: 150 GMAVHGYVLRAGFESLVNVSTALVDMYSKCGS---------------------------- 181
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
V +R +F GM + +SW +MI G +Q+G A+ +F++M EG+ T
Sbjct: 182 ---VSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGA 238
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L LE GK +H + + +V V ++L+ MY KCK + A +F+ + K +
Sbjct: 239 LHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTL 298
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW AM++GY QNGC EA+ FC MQ I+PD FT+ SVI + A L+ + HG
Sbjct: 299 VSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGL 358
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ L + V ALV Y KCG I + +LF+ MN R ++W A++ GY G +
Sbjct: 359 VIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTS 418
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++LF++M +KP+++T + LSACS +GLVE+G +FE M K+YGI P DHY M+D
Sbjct: 419 VELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVD 478
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAGRL +A FI KMP P + +L +C+IH NV++G+ AA + +L+P +
Sbjct: 479 LLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGY 538
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
+VLL++IYA+ W V+++R M + G++K PGCS ++ + VH F + S P S +I
Sbjct: 539 HVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKI 598
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y+ LE L ++ GYVPD +S+ HDVE K+++LN HSEKLAIAFGLL G PI +
Sbjct: 599 YSYLETLVDEIRAAGYVPDTNSI-HDVEDDVKVQLLNTHSEKLAIAFGLLNTSTGTPIHI 657
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCHNATKYIS +T REI+VRD RFHLFK+G CSCGD+W
Sbjct: 658 RKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHLFKDGVCSCGDYW 704
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 129/462 (27%), Positives = 224/462 (48%), Gaps = 37/462 (8%)
Query: 12 LISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKF 71
++ G+A S++ A+ ++ M D + + F+ +L + + G++IHG ++
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVV-YNFTYLLKLCGDNSDLKRGKEIHGSVITS 59
Query: 72 GFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLF 131
GF +F + +V+MYAK I DA FD +PE+
Sbjct: 60 GFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPER------------------------- 94
Query: 132 RGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALE 191
D + W TMI+G QNG + A+ L M EG D T S+L A L
Sbjct: 95 ------DLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLR 148
Query: 192 EGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYG 251
G +H +++R + V V +ALVDMY KC S+ A +F M + VVSW +M+ GY
Sbjct: 149 IGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYV 208
Query: 252 QNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFIT 311
Q+G +E A+ IF M G++P + T+ + +CA+L LE G H L S ++
Sbjct: 209 QSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVS 268
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG 371
V N+L++ Y KC ++ + +F + + VSW A++ GYA+ G NE ++ F +M S
Sbjct: 269 VMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRN 328
Query: 372 LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEA 431
+KPD T++ V+ A + + + + ++++ + + + T ++D+ ++ G + A
Sbjct: 329 IKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVF-VMTALVDMYAKCGAIHTA 387
Query: 432 KSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL 473
+ + M I W ++ HG +GK + E E+
Sbjct: 388 RKLFDMMN-ARHVITWNAMIDGYGTHG---LGKTSVELFKEM 425
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 180/367 (49%), Gaps = 14/367 (3%)
Query: 145 MITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRND 204
M+ G ++ A+ F M+ + + + F +L CG L+ GK+IH +I +
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 205 HKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFC 264
N+F + +V+MY KC+ I A ++F M +++V W M+ GY QNG ++ A+ +
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 265 NMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCG 324
M G PD T+ S++ + A+ L G HG L G S + VS ALV Y KCG
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180
Query: 325 NIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
++ + +F+ M+ R VSW +++ GY + G A + +F+KML G++P VT++G L
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDA 444
AC+ G +E+G+ + +V + + +I + S+ R++ A +
Sbjct: 241 ACADLGDLERGK-FVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLR-NKTL 298
Query: 445 IGWATLLSSCRIHGNVEIGKWAAESLLELDPYN--PASYVLLSSIYA-------SKGKWD 495
+ W ++ +G V A + E+ N P S+ ++S I A + KW
Sbjct: 299 VSWNAMILGYAQNGCVN---EALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWI 355
Query: 496 HVSQLRR 502
H +RR
Sbjct: 356 HGLVIRR 362
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 259/639 (40%), Positives = 390/639 (61%), Gaps = 1/639 (0%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN +I G + S A+ + M+ G+ + TF +L + G+QIH H+
Sbjct: 97 WNSMIRGLSMSLSPALALVFFVRMIYSGV-EPNSYTFPFLLKSCAKLASAHEGKQIHAHV 155
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
LK GF S VF+ + L++MYA+ G + +A+ FD+ ++ + + +I G G ++ +R
Sbjct: 156 LKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRAR 215
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
+LF M KD +SW MI G Q G +EA+ LF +MR + ++ T SVL+AC
Sbjct: 216 QLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSN 275
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
AL+ G + ++I N+ + +AL+DMY KC ++ A +F M ++V+SW M+
Sbjct: 276 ALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIG 335
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
GY +EA+ +F M +G+EP + T S++ SCA+L +++ G H
Sbjct: 336 GYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSV 395
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
++S +L+ Y KCGNI + ++F+ M ++ SW A++ G A G+A++ +LF KM
Sbjct: 396 STSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMS 455
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
S G++P+E+T +G+LSAC AGLV+ G+ +F MV++Y I P HY CMID+L RAG
Sbjct: 456 SDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLF 515
Query: 429 EEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIY 488
EEA+S + M PD W +LL +CR HG VE+G+ AE L EL+P NP +YVLLS+IY
Sbjct: 516 EEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIY 575
Query: 489 ASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLN 548
A GKWD V+++R + ++G++K PGC+ I+ + VH F D P S+ IY LE+++
Sbjct: 576 AGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVD 635
Query: 549 RKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCS 608
++ G+V D S VL+D++ K L+HHSEKLAIAFGL+ PG PIR++KNLRVC
Sbjct: 636 EQLKVFGFVADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCR 695
Query: 609 DCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+CH+ATK ISKI REI+ RD RFH FK+G CSC D+W
Sbjct: 696 NCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 734
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 187/377 (49%), Gaps = 36/377 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN +I+G+A G +A+ ++ M K + + T ++L + +DL
Sbjct: 221 MPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPP-NESTIVSVLSACAQSNALDL 279
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G + I G S + + + L+DMY+K G + A+ FD++ E++++ +N MI G
Sbjct: 280 GNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGG--- 336
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+T M + +EA+ LFREM G+ + TF S+
Sbjct: 337 ---------------------YTHMCS-------YKEALALFREMLASGVEPTEITFLSI 368
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L +C L A++ GK IHA+I +N + + + ++L+D+Y KC +I A VF M K++
Sbjct: 369 LPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSL 428
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
SW AM+ G +G +++A ++F M +GIEP++ T ++S+C + ++ G QF
Sbjct: 429 ASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSS 488
Query: 301 SLVTGLISFITVS-NALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKAN 358
+ IS + ++ G+ G E++ L M V+ D W +L+ G+
Sbjct: 489 MVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVE 548
Query: 359 ETIDLFEKMLSHGLKPD 375
+ E++ L+PD
Sbjct: 549 LGELVAERLFE--LEPD 563
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 142/291 (48%), Gaps = 35/291 (12%)
Query: 194 KQIHAFIIRNDHKDNVFVGSALVDMYCKCKS--IKYAESVFRTMAWKNVVSWTAMLVGYG 251
KQIHA II+ + +F S L++ +S I YA S+F ++ N+ W +M+ G
Sbjct: 46 KQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLS 105
Query: 252 QNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFIT 311
+ A+ F M +G+EP+ +T ++ SCA LAS EG Q H L G +S +
Sbjct: 106 MSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVF 165
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL------------------------ 347
+ +L+ Y + G + ++ +F++ N RD +S+TAL
Sbjct: 166 IHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKD 225
Query: 348 -------VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
++GYA+ G++ E + LFE M + P+E T++ VLSAC+++ ++ G +
Sbjct: 226 VVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLG-NSMR 284
Query: 401 IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
+++ G+ +ID+ S+ G L+ A+ + M D I W ++
Sbjct: 285 SWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDM-LERDVISWNVMI 334
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 252/627 (40%), Positives = 383/627 (61%), Gaps = 45/627 (7%)
Query: 21 SVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVG 80
++N + +++ M +G+ ++ T+ ++L ++ DLG QIH +LK GF V+V
Sbjct: 418 NLNKSFQIFTQMQIEGIVP-NQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVS 476
Query: 81 SPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSI 140
S L+DMYAK G ++ + ++FR +K+ D +
Sbjct: 477 SVLIDMYAK-------------------------------HGKLDHALKIFRRLKENDVV 505
Query: 141 SWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFI 200
SWT MI G Q+ EA++LF+EM+ +G+ D F S ++AC G+ AL++G+QIHA
Sbjct: 506 SWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQS 565
Query: 201 IRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAV 260
+ + D++ +G+ALV +Y +C ++ A + F + K+ VSW +++ G+ Q+G EEA+
Sbjct: 566 CLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEAL 625
Query: 261 KIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFY 320
IF M + G+E + FT GS +S+ AN+A++ G Q HG TG S VSNAL+T Y
Sbjct: 626 NIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLY 685
Query: 321 GKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLI 380
KCG I+D +SW ++++GY++ G E + LFE M + P+ VT +
Sbjct: 686 AKCGTIDD-------------ISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFV 732
Query: 381 GVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF 440
GVLSACS GLV++G YF M + + + P +HY C++D+L R+G L AK F+ +MP
Sbjct: 733 GVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPI 792
Query: 441 PPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQL 500
PDA+ W TLLS+C +H N++IG++AA LLEL+P + A+YVL+S++YA GKWD +
Sbjct: 793 QPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRT 852
Query: 501 RRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDM 560
R+ M+++GV+K+PG SW++ + VH F A D + P +D IY L L+ + + GYVP
Sbjct: 853 RQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIYEYLRGLDFRAAENGYVPRC 912
Query: 561 SSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKI 620
+S+L D E+ +K HSE+LAIAFGLL + P+ V KNLRVC DCHN K++SKI
Sbjct: 913 NSLLSDAEIRQKDPTEIIHSERLAIAFGLLSLTSSTPLYVFKNLRVCEDCHNWIKHVSKI 972
Query: 621 TQREILVRDAVRFHLFKNGECSCGDFW 647
T R I+VRD+ RFH FK G CSC D+W
Sbjct: 973 TDRVIIVRDSYRFHHFKVGSCSCKDYW 999
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 219/451 (48%), Gaps = 69/451 (15%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW +ISG + +G +A+ ++ ++ L +++ F + G+Q+
Sbjct: 229 DSVSWVAMISGLSQNGYEEEAMLLFCQIV---LSACTKVEF------------FEFGKQL 273
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG +LK GF S +V + LV +Y+ R G +
Sbjct: 274 HGLVLKQGFSSETYVCNALVTLYS-------------------------------RSGNL 302
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ ++F M +D +S+ ++I+GL Q G A+ LF++M L+ D T S+L+AC
Sbjct: 303 SSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSAC 362
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+ AL GKQ H++ I+ ++ V +L+D+Y KC IK A F
Sbjct: 363 ASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF------------ 410
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
+ YGQ ++ +IF MQ GI P+ FT S++ +C L + + G Q H + L T
Sbjct: 411 ---LCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKT 467
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G + VS+ L+ Y K G ++ + ++F + D VSWTA+++GY + K E ++LF
Sbjct: 468 GFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLF 527
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT---CMIDI 421
++M G+K D + +SAC+ +++GR + + + D + ++ +
Sbjct: 528 KEMQDQGIKSDNIGFASAISACAGIQALDQGRQ----IHAQSCLSGYSDDLSIGNALVSL 583
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+R G++ EA + +++ + D + W +L+S
Sbjct: 584 YARCGKVREAYAAFDQI-YAKDNVSWNSLVS 613
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 201/457 (43%), Gaps = 62/457 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP WN + + + + ++ ML + RI + S +
Sbjct: 123 MPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSGNAVSFRF 182
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
QIH + GF S F+ +PL+D+Y K G + AK
Sbjct: 183 VEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAK----------------------- 219
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
++F +K +DS+SW MI+GL QNG E EA+ LF ++ V
Sbjct: 220 --------KVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------V 257
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+AC + E GKQ+H +++ +V +ALV +Y + ++ AE +F M+ ++
Sbjct: 258 LSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDR 317
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VS+ +++ G Q G A+ +F M + +PD T+ S++S+CA++ +L G QFH
Sbjct: 318 VSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSY 377
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ G+ S I V +L+ Y KC +I+ +H F Y + N++
Sbjct: 378 AIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF---------------LCYGQLDNLNKS 422
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+F +M G+ P++ T +L C+ G + G V + G + + +ID
Sbjct: 423 FQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQ-IHTQVLKTGFQFNVYVSSVLID 481
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIH 457
+ ++ G+L+ A ++ D + W +++ H
Sbjct: 482 MYAKHGKLDHALKIFRRLK-ENDVVSWTAMIAGYTQH 517
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 202/454 (44%), Gaps = 73/454 (16%)
Query: 80 GSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDS 139
G L+D Y G + A FDE+P +++ +N + + L+
Sbjct: 100 GLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGR------------- 146
Query: 140 ISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC-GGLLALEEGKQIHA 198
+ GL FR M + + D+ F VL C G ++ +QIHA
Sbjct: 147 ------VPGL------------FRRMLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHA 188
Query: 199 FIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEE 258
I + + + F+ + L+D+Y K + A+ VF + ++ VSW AM+ G QNG EE
Sbjct: 189 KTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEE 248
Query: 259 AVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVT 318
A+ +FC + V+S+C + E G Q HG L G S V NALVT
Sbjct: 249 AMLLFCQI--------------VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVT 294
Query: 319 FYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVT 378
Y + GN+ + ++F+ M+ RD VS+ +L+SG A+ G N + LF+KM KPD VT
Sbjct: 295 LYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVT 354
Query: 379 LIGVLSACSRAGLVEKGRHY-------------------FEIMVKEYGIRPIHDHYTCMI 419
+ +LSAC+ G + G+ + ++ VK I+ H+ + C
Sbjct: 355 VASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCY- 413
Query: 420 DILSRAGRLEEAKSFINKMPFP---PDAIGWATLLSSCRIHGNVEIGKWAAESLLELD-P 475
+ L ++ +M P+ + ++L +C G ++G+ +L+
Sbjct: 414 ---GQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQ 470
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
+N +L +YA GK DH ++ R ++E V
Sbjct: 471 FNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDV 504
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 18/165 (10%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSWN L+SG A G +A+ ++ M K GL ++ TF + + +++ V +G+QI
Sbjct: 604 DNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGL-EINSFTFGSAVSAAANIANVRIGKQI 662
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG I K G+ S V + L+ +YAK G I D + +N+MITG + G
Sbjct: 663 HGMIRKTGYDSETEVSNALITLYAKCGTIDD-------------ISWNSMITGYSQHGCG 709
Query: 125 EESRRLFRGMKDKD----SISWTTMITGLMQNGLEREAIDLFREM 165
E+ +LF MK D +++ +++ GL E I FR M
Sbjct: 710 FEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSM 754
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 256/647 (39%), Positives = 388/647 (59%), Gaps = 33/647 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V++N ++ G + GS +A+ ++ M + GL +R TFST+L +++ + L
Sbjct: 201 MPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLA-ATRFTFSTVLTVATGVGDLCL 259
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+HG + + S VFV + L+D Y+K +
Sbjct: 260 GRQVHGLVAR-ATSSNVFVNNSLLDFYSKCDCL--------------------------- 291
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+E ++LF M ++D++S+ MI G N + LFREM+ + S+
Sbjct: 292 ----DEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASL 347
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+ G + + GKQIHA ++ VG+AL+DMY KC + A++ F K
Sbjct: 348 LSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTG 407
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWTAM+ G QNG EEA+++FC M+R G+ PD T S I + +NLA + G Q H
Sbjct: 408 VSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSY 467
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ +G +S + +AL+ Y KCG ++++ + F+EM R+ +SW A++S YA +G+A
Sbjct: 468 LIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNA 527
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
I +FE ML +G KPD VT + VLSACS GL E+ YFE+M EYGI P +HY+C+ID
Sbjct: 528 IKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVID 587
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
L R GR ++ + + +MPF D I W+++L SCR HGN ++ + AAE L + +
Sbjct: 588 TLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATP 647
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YV+LS+I+A GKW+ + +++ MR++G+RK+ G SW++ K +V+ FS++D ++P +I
Sbjct: 648 YVILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYSFSSNDQTNPMITEI 707
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
ELE+L ++M K+GY PD S L V+ K++ L +HSE+LAIAF L+ PPG PIRV
Sbjct: 708 KDELERLYKEMDKQGYKPDTSCTLQQVDDDIKLESLKYHSERLAIAFALINTPPGTPIRV 767
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+KNL C DCH+A K +SKI R+I+VRD+ RFH FK+G CSCGD+W
Sbjct: 768 MKNLSACVDCHSAIKMMSKIVNRDIIVRDSSRFHHFKDGFCSCGDYW 814
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/489 (28%), Positives = 240/489 (49%), Gaps = 34/489 (6%)
Query: 3 FHDGVSWNLLISGHASH--GSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
D V+W ++I AS +DAV ++ ML++G+ R+T +T+L + +
Sbjct: 96 LRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAP-DRVTVATVLNLPPASG---- 150
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G + + + S L KLGL++ N+V+ NT++ +
Sbjct: 151 -----------GTAAAIIIAS-LHPFALKLGLLH-----------SNVVVCNTLLDAYCK 187
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL+ +RR+F+ M +DS+++ M+ G + G EA+DLF MR +GLA +FTF +V
Sbjct: 188 HGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTV 247
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LT G+ L G+Q+H + R NVFV ++L+D Y KC + + +F M ++
Sbjct: 248 LTVATGVGDLCLGRQVHGLVARAT-SSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDN 306
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VS+ M+ GY N C+ +++F MQ + S++S ++ + G Q H +
Sbjct: 307 VSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQ 366
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ GL S V NAL+ Y KCG ++ + F N + VSWTA+++G + G+ E
Sbjct: 367 LVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEA 426
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LF M GL PD T + A S ++ GR +++ + + + ++D
Sbjct: 427 LQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSG-SALLD 485
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+ ++ G L+EA ++MP ++I W ++S+ +G + E +L + P S
Sbjct: 486 MYTKCGCLDEALQTFDEMP-ERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYG-FKPDS 543
Query: 481 YVLLSSIYA 489
LS + A
Sbjct: 544 VTFLSVLSA 552
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 196/408 (48%), Gaps = 14/408 (3%)
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVM-YNTMITGLLRRG 122
+ ++K GF + + L+ G + A+ FD++P +N N M++G R G
Sbjct: 21 LDARMVKTGFDPATYRLNLLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSG 80
Query: 123 LVEESRRLFRGMKD--KDSISWTTMITGLMQNGLER--EAIDLFREMRLEGLAMDQFTFG 178
+ + LF +D+++WT MI R +A+ LFR+M EG+A D+ T
Sbjct: 81 QLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVA 140
Query: 179 SVLT---ACGGLLALEEGKQIHAFIIR-NDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
+VL A GG A +H F ++ NV V + L+D YCK + A VF+
Sbjct: 141 TVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQE 200
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
M ++ V++ AM++G + G EA+ +F M+R G+ FT +V++ + L G
Sbjct: 201 MPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLG 260
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
Q HG + S + V+N+L+ FY KC +++ +LF+EM RD VS+ +++GYA
Sbjct: 261 RQVHGL-VARATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWN 319
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
A+ + LF +M S + +LS + G+ +V G+
Sbjct: 320 RCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVL-LGLSSEDLV 378
Query: 415 YTCMIDILSRAGRLEEAKS-FINKMPFPPDAIGWATLLSSCRIHGNVE 461
+ID+ S+ G L+ AK+ FINK + W +++ C +G E
Sbjct: 379 GNALIDMYSKCGMLDAAKTNFINKN--DKTGVSWTAMITGCVQNGQQE 424
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 253/644 (39%), Positives = 401/644 (62%), Gaps = 8/644 (1%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN ++ G AS + +++Y M+ G + TF +L + + + GRQIH +
Sbjct: 51 WNTMLRGLASSSDLVSPLEMYVRMVSXG-HVPNAYTFPFLLKSCAKSKTFEEGRQIHAQV 109
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+K G + + L+ MYA+ G + DA++ FD ++++V +ITG RG V +R
Sbjct: 110 MKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSAR 169
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
++F + ++D +SW MITG ++N EA++LF+EM + D+ T SVL+AC
Sbjct: 170 KVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSG 229
Query: 189 ALEEGKQIHAFIIRNDHK---DNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
++E G++IH + +DH ++ + +A + +Y KC ++ A +F ++ K+VVSW
Sbjct: 230 SIELGREIHTLV--DDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNT 287
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG--RSLV 303
++ GY +EA+ +F M R+G P+D T+ SV+ +CA+L +++ G H +
Sbjct: 288 LIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRL 347
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
G+ + + +L+ Y KCG+IE +H++FN M + SW A++ G+A G+AN DL
Sbjct: 348 KGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDL 407
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F +M +G++PD++TL+G+LSACS +GL++ GRH F+ + ++Y I P +HY CMID+L
Sbjct: 408 FSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLG 467
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
AG +EA+ I+ MP PD + W +LL +C++HGN+E+ + A+ L+E++P N SYVL
Sbjct: 468 HAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVL 527
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LS+IYA+ G+W+ V+++R + KG++K PGCS I+ S VH F D P S +IY
Sbjct: 528 LSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRM 587
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
LE+++ + + G+VPD S VL ++E K L HHSEKLAIAFGL+ PG + VVKN
Sbjct: 588 LEEMDVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTVVKN 647
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LRVC +CH ATK ISKI +REI+ RD RFH F++G CSC D+W
Sbjct: 648 LRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCCDYW 691
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 179/365 (49%), Gaps = 40/365 (10%)
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
+F ++ + + W TM+ GL + ++++ M G + +TF +L +C
Sbjct: 39 VFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKT 98
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK---------------------CKS---- 224
EEG+QIHA +++ + + + ++L+ MY + C +
Sbjct: 99 FEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITG 158
Query: 225 ------IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
++ A VF + ++VVSW AM+ GY +N EEA+++F M R + PD+ TL
Sbjct: 159 YASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTL 218
Query: 279 GSVISSCANLASLEEGTQFHGRSLVT---GLISFITVSNALVTFYGKCGNIEDSHRLFNE 335
SV+S+CA S+E G + H +LV G S + + NA + Y KCG++E + LF
Sbjct: 219 VSVLSACAQSGSIELGREIH--TLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEG 276
Query: 336 MNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG 395
++ +D VSW L+ GY E + LF++ML G P++VT++ VL AC+ G ++ G
Sbjct: 277 LSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIG 336
Query: 396 R--HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
R H + I + G+ T +ID+ ++ G +E A N M W ++
Sbjct: 337 RWIHVY-IDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSM-MHKSLSSWNAMIFG 394
Query: 454 CRIHG 458
+HG
Sbjct: 395 FAMHG 399
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 178/401 (44%), Gaps = 70/401 (17%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVY-----------NLMLKDGLGNL------------- 40
D VS LI+G+AS G V A KV+ N M+ + N
Sbjct: 148 DVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMM 207
Query: 41 ------SRITFSTMLIMSSSRRCVDLGRQIHGHILK-FGFGSYVFVGSPLVDMYAKLGLI 93
T ++L + ++LGR+IH + GFGS + + + + +Y+K G +
Sbjct: 208 RTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDV 267
Query: 94 YDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNG 153
A F+ L K++V +NT+I G +T M
Sbjct: 268 EIASGLFEGLSCKDVVSWNTLIGG------------------------YTHM-------N 296
Query: 154 LEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGS 213
L +EA+ LF+EM G + + T SVL AC L A++ G+ IH +I + V GS
Sbjct: 297 LYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYI--DKRLKGVTNGS 354
Query: 214 A----LVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN 269
A L+DMY KC I+ A VF +M K++ SW AM+ G+ +G + A +F M++N
Sbjct: 355 ALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKN 414
Query: 270 GIEPDDFTLGSVISSCANLASLEEGTQ-FHGRSLVTGLISFITVSNALVTFYGKCGNIED 328
GIEPDD TL ++S+C++ L+ G F + + + ++ G G ++
Sbjct: 415 GIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKE 474
Query: 329 SHRLFNEMNVR-DEVSWTALVSGYAKFGKANETIDLFEKML 368
+ + + M + D V W +L+ G +K++
Sbjct: 475 AEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLM 515
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 117/258 (45%), Gaps = 32/258 (12%)
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ YA SVF T N++ W ML G + ++++ M G P+ +T ++ S
Sbjct: 33 LPYAVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKS 92
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
CA + EEG Q H + + G +L++ Y + G +ED+ ++F+ + RD VS
Sbjct: 93 CAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSC 152
Query: 345 TALVSGYAKFGKA-------------------------------NETIDLFEKMLSHGLK 373
TAL++GYA G E ++LF++M+ ++
Sbjct: 153 TALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVR 212
Query: 374 PDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKS 433
PDE TL+ VLSAC+++G +E GR ++ +G I + S+ G +E A
Sbjct: 213 PDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASG 272
Query: 434 FINKMPFPPDAIGWATLL 451
+ D + W TL+
Sbjct: 273 LFEGLSC-KDVVSWNTLI 289
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 276/656 (42%), Positives = 391/656 (59%), Gaps = 45/656 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VS+N LIS +A G A+ +++ M + GL ++ T S ++ C D+
Sbjct: 100 IPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGL-DMDXFTLSAVITAC----CDDV 154
Query: 61 GR--QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G Q+H + GF SYV V + L+ Y K G + DAK
Sbjct: 155 GLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAK--------------------- 193
Query: 119 LRRGLVEESRRLFRGMKD-KDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
R+F GM +D +SW +MI Q+ +A+ LF+EM GL +D FT
Sbjct: 194 ----------RVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTL 243
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS-IKYAESVFRTMA 236
SVLTA L L G Q H +I+ N VGS L+D+Y KC + VF +
Sbjct: 244 ASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEIT 303
Query: 237 WKNVVSWTAMLVGYGQNG-CSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
++V W M+ GY QN E+A++ F MQ G P+D + VIS+C+NL+S +G
Sbjct: 304 EPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGK 363
Query: 296 QFHGRSLVTGLIS-FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
Q H +L + + S I+V NAL+ Y KCGN++D+ RLF+ M + VS ++++GYA+
Sbjct: 364 QIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQH 423
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G E++ LF+ ML + P +T I VLSAC+ G VE+G +YF +M +++ I P +H
Sbjct: 424 GIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEH 483
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
Y+CMID+L RAG+L EA++ I +MPF P +IGWA+LL +CR HGN+E+ AA +L+L+
Sbjct: 484 YSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLE 543
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS 534
P N A YV+LS++YAS G+W+ V+ +R+ MR++GV+K PGCSWI+ K R+H+F A+D S
Sbjct: 544 PSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSH 603
Query: 535 PYSDQIYAELEKLNRKMIKEGYVPDMSSVL---HDVELSEKIKMLNHHSEKLAIAFGLLF 591
P +IY LE+++ KM + GYVPD+ L EK L HHSEKLA+AFGL+
Sbjct: 604 PMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLIS 663
Query: 592 IPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G P+ VVKNLR+C DCHNA K+IS I REI VRDA RFH FK G+CSCGD+W
Sbjct: 664 TKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 257/672 (38%), Positives = 413/672 (61%), Gaps = 31/672 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYN---LMLKDGLGNLSR--ITFSTMLIMSSSRRCVD 59
D +SWN +++ H + A+++++ +++ + N I+ +L +S + +
Sbjct: 217 DVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKALP 276
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
++IH + ++ G + FV + L+D YAK G + DA + F+ + K++V +N M+TG
Sbjct: 277 QIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYT 336
Query: 120 RRGLVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
+ G + LF M+ + D I+W+ +I G Q G +EA+D F++M L+G +
Sbjct: 337 QSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSV 396
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRN------------DHKDNVFVGSALVDMYCKCK 223
T S+L+AC L AL +G +IHA+ ++ +++ V +AL+DMY KC+
Sbjct: 397 TIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCR 456
Query: 224 SIKYAESVFRTMAWK--NVVSWTAMLVGYGQNGCSEEAVKIFCNM--QRNGIEPDDFTLG 279
S K A S+F ++ + NVV+WT M+ GY Q G S +A+KIF M + + P+ +T+
Sbjct: 457 SFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTIS 516
Query: 280 SVISSCANLASLEEGTQFHGRSLVTG----LISFITVSNALVTFYGKCGNIEDSHRLFNE 335
++ +CA+LA+L G Q H + VT S V+N L+ Y KCG+++ + +F+
Sbjct: 517 CILMACAHLAALRMGKQIH--AYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDS 574
Query: 336 MNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG 395
M R+EVSWT+++SGY G+ E +D+F+KM G PD+++ + +L ACS +G+V++G
Sbjct: 575 MPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQG 634
Query: 396 RHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCR 455
+YF+IM ++Y + +HY C+ID+L+R GRL++A I +MP P A+ W LLS+CR
Sbjct: 635 LNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACR 694
Query: 456 IHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGC 515
+H NVE+ ++A L+ + N SY L+S+IYA+ +W V+++R+ M++ G++K PGC
Sbjct: 695 VHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRPGC 754
Query: 516 SWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKM 575
SW++ K F D S P S +IY+ LE+L ++ GYVP+ + LHDV+ EK +
Sbjct: 755 SWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDVDDEEKNNL 814
Query: 576 LNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHL 635
L+ HSEKLA+A+GLL PG PIR+ KNLRVC DCH+A YISKI EI+VRD+ RFH
Sbjct: 815 LSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIIVRDSSRFHH 874
Query: 636 FKNGECSCGDFW 647
FKNG CSCG +W
Sbjct: 875 FKNGSCSCGGYW 886
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 145/511 (28%), Positives = 238/511 (46%), Gaps = 88/511 (17%)
Query: 6 GVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIH 65
V WNLL+ H G ++ A+ V ML+ G T L GR +H
Sbjct: 114 AVWWNLLVREHIKEGHLDRAIGVSCRMLRAGT-KPDHFTLPYALKACGELPSYCCGRALH 172
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
G I GF S VFV + LV MY++ G + DA FDE+ K I
Sbjct: 173 GLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGI----------------- 215
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL------EGLAMDQFTFGS 179
D ISW +++ ++ R A++LF EM + D + +
Sbjct: 216 -----------DDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVN 264
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L AC L AL + K+IH++ IRN + FV +AL+D Y KC S+ A VF M +K+
Sbjct: 265 ILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKD 324
Query: 240 VVSWTAM-----------------------------------LVGYGQNGCSEEAVKIFC 264
VVSW AM + GY Q GCS+EA+ F
Sbjct: 325 VVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQ 384
Query: 265 NMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF------------ITV 312
M +G EP+ T+ S++S+CA+L +L +G + H SL L+S + V
Sbjct: 385 QMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMV 444
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDE--VSWTALVSGYAKFGKANETIDLFEKMLS- 369
NAL+ Y KC + + + +F+ + R+ V+WT ++ GYA++G +N+ + +F +M+S
Sbjct: 445 YNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISK 504
Query: 370 -HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP-IHDHYTCMIDILSRAGR 427
+ + P+ T+ +L AC+ + G+ + + + P ++ C+ID+ S+ G
Sbjct: 505 PYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGD 564
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
++ A++ + MP + + W +++S +HG
Sbjct: 565 VDTARNVFDSMP-KRNEVSWTSMMSGYGMHG 594
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 186/378 (49%), Gaps = 33/378 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M F D VSWN +++G+ G+ A +++ M K+ + L IT+S ++ + R C
Sbjct: 320 MEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIP-LDVITWSAVIAGYAQRGCSQE 378
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLI--------YDAKRGFDEL--------P 104
++ G L+ A LG + Y K+ L
Sbjct: 379 ALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGD 438
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGM--KDKDSISWTTMITGLMQNGLEREAIDLF 162
+++++YN +I + + +R +F + ++++ ++WT MI G Q G +A+ +F
Sbjct: 439 GEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIF 498
Query: 163 REM--RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIR-NDHKDNV-FVGSALVDM 218
EM + +A + +T +L AC L AL GKQIHA++ R ++++ +V FV + L+DM
Sbjct: 499 SEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDM 558
Query: 219 YCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
Y KC + A +VF +M +N VSWT+M+ GYG +G +EA+ IF MQ+ G PDD +
Sbjct: 559 YSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISF 618
Query: 279 GSVISSCANLASLEEGTQF-----HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLF 333
++ +C++ +++G + +V + V + +CG ++ + +
Sbjct: 619 LVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACV----IDLLARCGRLDKAWKTI 674
Query: 334 NEMNVR-DEVSWTALVSG 350
EM + V W AL+S
Sbjct: 675 QEMPMEPSAVIWVALLSA 692
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 181/396 (45%), Gaps = 59/396 (14%)
Query: 103 LPEKNIVMYNTMITGL----LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREA 158
LP + V ++ TG+ L G +++ + + ++ W ++ ++ G A
Sbjct: 74 LPSHSYVSPKSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRA 133
Query: 159 IDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDM 218
I + M G D FT L ACG L + G+ +H I N + NVFV +ALV M
Sbjct: 134 IGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAM 193
Query: 219 YCKCKSIKYAESVFRTMAWK---NVVSWTAMLVGYGQNGCSEEAVKIFCNM------QRN 269
Y +C S++ A VF + K +V+SW +++ + + A+++F M +
Sbjct: 194 YSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKAT 253
Query: 270 GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
D ++ +++ +CA+L +L + + H ++ G + V NAL+ Y KCG++ D+
Sbjct: 254 NERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDA 313
Query: 330 HRLFNEMNVRDEVSWTALVS-----------------------------------GYAKF 354
++FN M +D VSW A+V+ GYA+
Sbjct: 314 VKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQR 373
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G + E +D F++M+ G +P+ VT+I +LSAC+ G + +G +K+ + +D
Sbjct: 374 GCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDF 433
Query: 415 -----------YTCMIDILSRAGRLEEAKSFINKMP 439
Y +ID+ S+ + A+S + +P
Sbjct: 434 GGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIP 469
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 123/262 (46%), Gaps = 19/262 (7%)
Query: 211 VGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
+G+ +V Y C + K A SV + V W ++ + + G + A+ + C M R G
Sbjct: 85 LGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAG 144
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
+PD FTL + +C L S G HG G S + V NALV Y +CG++ED+
Sbjct: 145 TKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDAS 204
Query: 331 RLFNEMN---VRDEVSWTALVSGYAKFGKANETIDLFEKM------LSHGLKPDEVTLIG 381
+F+E+ + D +SW ++V+ + K ++LF +M + + D ++++
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVN 264
Query: 382 VLSACSRAGLVEKGRHYFEIMVKEYGIR--PIHDHYTC--MIDILSRAGRLEEAKSFINK 437
+L AC+ + + + + Y IR D + C +ID ++ G + +A N
Sbjct: 265 ILPACASLKALPQIKE-----IHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNV 319
Query: 438 MPFPPDAIGWATLLSSCRIHGN 459
M F D + W +++ GN
Sbjct: 320 MEF-KDVVSWNAMVTGYTQSGN 340
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 268/641 (41%), Positives = 395/641 (61%), Gaps = 32/641 (4%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V WN+++ + +++D+ +++ M +G+ ++ T+ ++L +S + LG QIH
Sbjct: 429 VLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIP-NQFTYPSILRTCTSLGALYLGEQIHT 487
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
H++K GF V+V S L+DMYAK G + A R LPE ++V
Sbjct: 488 HVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVV----------------- 530
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
SWT MI G +Q+ + EA+ LF EM G+ D F S ++AC G
Sbjct: 531 --------------SWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAG 576
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+ AL +G+QIHA ++ + +AL+ +Y +C I+ A F + KN +SW ++
Sbjct: 577 IRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSL 636
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ G Q+G EEA+++F M R E + FT GS IS+ A+LA++++G Q H L TG
Sbjct: 637 VSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGY 696
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
S VSN+L++ Y K G+I D+ R FN+M+ R+ +SW A+++GY++ G E + LFE+
Sbjct: 697 DSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEE 756
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M G+ P+ VT +GVLSACS GLV++G YFE M K + + P +HY C++D+L RAG
Sbjct: 757 MKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAG 816
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+L+ A +I +MP P DA+ W TLLS+C IH N+EIG+ AA LLEL+P + A+YVL+S+
Sbjct: 817 QLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISN 876
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IYA +W H R+ M++ GV+K+PG SWI+ K+ VH F A D P ++QIY +
Sbjct: 877 IYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGH 936
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
LNR+ + GYV D S+L++ E +K + + HSEKLAIAFGLL + +PIRV+KNLRV
Sbjct: 937 LNRRTSEIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRV 996
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C+DCHN KY+SKI+ R I+VRDA RFH F G CSC DFW
Sbjct: 997 CNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 132/458 (28%), Positives = 237/458 (51%), Gaps = 34/458 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M DGVS+N LISG G + A++++ M +D L IT +++L +S +
Sbjct: 322 MNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCL-KPDCITVASLLSACASVGALHK 380
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+H H +K G + + + L+D+Y+K + A + F +NIV++N M+
Sbjct: 381 GMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAY-- 438
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G D S ++ ++FR+M++EG+ +QFT+ S+
Sbjct: 439 ------------GQLDNLS-----------------DSFEIFRQMQMEGMIPNQFTYPSI 469
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C L AL G+QIH +I+ + NV+V S L+DMY K + A + R + +V
Sbjct: 470 LRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDV 529
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWTAM+ GY Q+ EA+++F M+ GI+ D+ S IS+CA + +L +G Q H +
Sbjct: 530 VSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQ 589
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
S G + ++++NAL++ Y +CG I++++ F ++ ++ +SW +LVSG A+ G E
Sbjct: 590 SYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEA 649
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ +F +ML + + T +SA + +++G+ +++K G + +I
Sbjct: 650 LQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKT-GYDSEREVSNSLIS 708
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ +++G + +A N M + I W +++ HG
Sbjct: 709 LYAKSGSISDAWREFNDMS-ERNVISWNAMITGYSQHG 745
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 227/459 (49%), Gaps = 38/459 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+W +ISG + +G +A+ ++ M + + S++L S+ + +LG Q+
Sbjct: 225 DIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYV-LSSVLSASTKIQLFELGEQL 283
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H ++K+GF S +V + LV +Y++ R L+
Sbjct: 284 HCLVIKWGFHSETYVCNGLVALYSR------------------------------SRKLI 313
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ R+F M +D +S+ ++I+GL+Q G A++LF +M+ + L D T S+L+AC
Sbjct: 314 S-AERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSAC 372
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+ AL +G Q+H+ I+ ++ + +L+D+Y KC ++ A F +N+V W
Sbjct: 373 ASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWN 432
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
MLV YGQ ++ +IF MQ G+ P+ FT S++ +C +L +L G Q H + T
Sbjct: 433 VMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKT 492
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G + V + L+ Y K G + + R+ + D VSWTA+++GY + +E + LF
Sbjct: 493 GFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLF 552
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY--GIRPIHDHYTCMIDIL 422
E+M G++ D + +SAC+ + +G+ +I + Y G +I +
Sbjct: 553 EEMEYRGIQFDNIGFASAISACAGIRALRQGQ---QIHAQSYAAGFGADLSINNALISLY 609
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+R GR++EA K+ + I W +L+S G E
Sbjct: 610 ARCGRIQEAYLAFEKIG-DKNNISWNSLVSGLAQSGYFE 647
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 224/453 (49%), Gaps = 49/453 (10%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCV------DLG 61
SWN +I + S ++ ML +G+ + TF+ +L + CV +
Sbjct: 126 SWNKMIHVFVAQKSNFQVFCLFRRMLAEGI-TPNGYTFAGVL-----KACVGGDIAFNYV 179
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+Q+H +GF S V + L+D+Y+K
Sbjct: 180 KQVHSRTFYYGFDSSPLVANLLIDLYSK-------------------------------N 208
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G +E ++++F + KD ++W MI+GL QNGLE EAI LF +M + + SVL
Sbjct: 209 GYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVL 268
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+A + E G+Q+H +I+ +V + LV +Y + + + AE +F TM ++ V
Sbjct: 269 SASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGV 328
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
S+ +++ G Q G S+ A+++F MQR+ ++PD T+ S++S+CA++ +L +G Q H +
Sbjct: 329 SYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHA 388
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ G+ + I + +L+ Y KC ++E +H+ F + V W ++ Y + +++
Sbjct: 389 IKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSF 448
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC--MI 419
++F +M G+ P++ T +L C+ G + G ++K G + + Y C +I
Sbjct: 449 EIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKT-GFQL--NVYVCSVLI 505
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
D+ ++ G+L A + ++P D + W +++
Sbjct: 506 DMYAKYGQLALALRILRRLP-EDDVVSWTAMIA 537
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 171/340 (50%), Gaps = 6/340 (1%)
Query: 96 AKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLE 155
+K GFD P ++ ++++ R G + ++F ++ SW MI +
Sbjct: 85 SKSGFDGEP----LLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSN 140
Query: 156 REAIDLFREMRLEGLAMDQFTFGSVLTAC-GGLLALEEGKQIHAFIIRNDHKDNVFVGSA 214
+ LFR M EG+ + +TF VL AC GG +A KQ+H+ + V +
Sbjct: 141 FQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANL 200
Query: 215 LVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD 274
L+D+Y K I+ A+ VF + K++V+W AM+ G QNG EEA+ +FC+M + I P
Sbjct: 201 LIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPT 260
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN 334
+ L SV+S+ + E G Q H + G S V N LV Y + + + R+F+
Sbjct: 261 PYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFS 320
Query: 335 EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEK 394
MN RD VS+ +L+SG + G ++ ++LF KM LKPD +T+ +LSAC+ G + K
Sbjct: 321 TMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHK 380
Query: 395 GRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSF 434
G +K G+ ++D+ S+ +E A F
Sbjct: 381 GMQLHSHAIKA-GMSADIILEGSLLDLYSKCADVETAHKF 419
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 147/323 (45%), Gaps = 11/323 (3%)
Query: 133 GMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEE 192
G + S TT+ M+ G + + I L M G+ + + +L C +L E
Sbjct: 21 GATNSHSFDQTTL---HMEQG-KSKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFE 76
Query: 193 GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
++H I ++ + +LVD Y + A VF + ++V SW M+ +
Sbjct: 77 TMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVA 136
Query: 253 NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC-ANLASLEEGTQFHGRSLVTGLISFIT 311
+ + +F M GI P+ +T V+ +C + Q H R+ G S
Sbjct: 137 QKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPL 196
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG 371
V+N L+ Y K G IE + ++FN + ++D V+W A++SG ++ G E I LF M +
Sbjct: 197 VANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASE 256
Query: 372 LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC--MIDILSRAGRLE 429
+ P L VLSA ++ L E G +++K +G + Y C ++ + SR+ +L
Sbjct: 257 IFPTPYVLSSVLSASTKIQLFELGEQLHCLVIK-WGFHS--ETYVCNGLVALYSRSRKLI 313
Query: 430 EAKSFINKMPFPPDAIGWATLLS 452
A+ + M D + + +L+S
Sbjct: 314 SAERIFSTMN-SRDGVSYNSLIS 335
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 93/165 (56%), Gaps = 5/165 (3%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
+ +SWN L+SG A G +A++V+ ML+ ++ T+ + + ++S + G+QI
Sbjct: 629 NNISWNSLVSGLAQSGYFEEALQVFVRMLRTE-AEVNMFTYGSAISAAASLANIKQGQQI 687
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +LK G+ S V + L+ +YAK G I DA R F+++ E+N++ +N MITG + G
Sbjct: 688 HSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCG 747
Query: 125 EESRRLFRGMKD----KDSISWTTMITGLMQNGLEREAIDLFREM 165
E+ RLF MK + +++ +++ GL +E +D F M
Sbjct: 748 MEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESM 792
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 95/235 (40%), Gaps = 10/235 (4%)
Query: 260 VKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTF 319
+++ M+ G+ + ++ C SL E + H R +G + ++LV
Sbjct: 43 IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102
Query: 320 YGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTL 379
Y + G+ + ++F+E + R SW ++ + + LF +ML+ G+ P+ T
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162
Query: 380 IGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP 439
GVL AC + YG +ID+ S+ G +E AK N +
Sbjct: 163 AGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCIC 222
Query: 440 FPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN----PASYVLLSSIYAS 490
D + W ++S +G E LL D + P YVL S + AS
Sbjct: 223 M-KDIVTWVAMISGLSQNGLEE-----EAILLFCDMHASEIFPTPYVLSSVLSAS 271
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 273/707 (38%), Positives = 401/707 (56%), Gaps = 70/707 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLK-DGLGNL-SRITFSTML-----IMSS 53
+ D VS+N +I+ + SHG ND NL ++ G L TFS++L I
Sbjct: 99 LTIRDTVSYNAMITAY-SHG--NDGHAALNLFVQMKRYGFLPDPFTFSSVLSALSLIADE 155
Query: 54 SRRCVDLGRQIHGHILKFG-----------FGSYVFVGS-PLVDMYAKLGLIYDAKRGFD 101
R C + +H ++K G YV S PLV L+ A++ FD
Sbjct: 156 ERHC----QMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVK---SSQLMASARKVFD 208
Query: 102 ELPEKNIV--MYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAI 159
E P+ I + TMI G +R + +R L G+ ++W MI+G ++ GL EA
Sbjct: 209 ETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAF 268
Query: 160 DLFREMRLEGLAMDQFTFGSVLTACGG----LLALEEGKQIHAFIIRN----DHKDNVFV 211
D FR M G+ D++T+ S+++ACG + G+Q+H +I+R H + V
Sbjct: 269 DTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSV 328
Query: 212 GSALVDMYCK-------------------------------CKSIKYAESVFRTMAWKNV 240
+AL+ Y K + I+ A S+F M +NV
Sbjct: 329 NNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNV 388
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
++WT M+ G QNG EE +K+F M+ G+EP D+ I++C+ L SL+ G Q H +
Sbjct: 389 LTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQ 448
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ G S ++ NAL+T Y +CG +E + +F M D VSW A+++ A+ G +
Sbjct: 449 VIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKA 508
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
I+LFE+M+ + PD +T + +L+AC+ AGL+++GRHYF+ M YGI P DHY +ID
Sbjct: 509 IELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLID 568
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG +A+S I MPF A W LL+ CRIHGN+E+G AA+ LLEL P +
Sbjct: 569 LLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDGT 628
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
Y++LS++YA+ G+WD V+++R MRE+GV+K+PGCSW++ ++ VH+F DD P +
Sbjct: 629 YIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQAV 688
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y L++L +M K GYVPD VLHD+E K L+ HSEKLA+ +G++ +P G IRV
Sbjct: 689 YTYLQQLVNEMKKLGYVPDTKFVLHDMESEHKEHSLSTHSEKLAVVYGIMKLPLGATIRV 748
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLR+C DCHNA KYISK+ +REI+VRD RFH FKNGECSCG++W
Sbjct: 749 FKNLRICGDCHNAFKYISKVVEREIVVRDRKRFHHFKNGECSCGNYW 795
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 137/489 (28%), Positives = 225/489 (46%), Gaps = 96/489 (19%)
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+ R +H HIL GF F+ + L+++Y K I A++ FD++P+ +IV T+++
Sbjct: 23 IARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYS 82
Query: 120 RRGLVEESRRLFRG--MKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
G V+ +++LF + +D++S+ MIT A++LF +M+ G D FTF
Sbjct: 83 SSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTF 142
Query: 178 GSVLTACGGLLALEE--GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS---------IK 226
SVL+A L+A EE + +H +I+ V +AL+ Y C S +
Sbjct: 143 SSVLSAL-SLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMA 201
Query: 227 YAESVFRTM--------AWKNV-------------------------VSWTAMLVGYGQN 253
A VF +W + V+W AM+ GY +
Sbjct: 202 SARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRR 261
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN----LASLEEGTQFHG---RSLVTGL 306
G EEA F M GI+ D++T S+IS+C + + G Q HG R++V
Sbjct: 262 GLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPS 321
Query: 307 ISFI-TVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY-------------- 351
F+ +V+NAL+TFY K + ++ R+F++M VRD +SW A++SGY
Sbjct: 322 HHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFS 381
Query: 352 -----------------AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEK 394
A+ G E + LF +M S GL+P + G ++ACS G ++
Sbjct: 382 EMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDN 441
Query: 395 GRHYFEIMVKEYGIRPIHDH----YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATL 450
G+ + IR HD +I + SR G +E A+S MP+ D++ W +
Sbjct: 442 GQQ-----IHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPY-VDSVSWNAM 495
Query: 451 LSSCRIHGN 459
+++ HG+
Sbjct: 496 IAALAQHGH 504
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 276/656 (42%), Positives = 391/656 (59%), Gaps = 45/656 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VS+N LIS +A G A+ +++ M + GL ++ T S ++ C D+
Sbjct: 100 IPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGL-DMDGFTLSAVITAC----CDDV 154
Query: 61 GR--QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G Q+H + GF SYV V + L+ Y K G + DAK
Sbjct: 155 GLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAK--------------------- 193
Query: 119 LRRGLVEESRRLFRGMKD-KDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
R+F GM +D +SW +MI Q+ +A+ LF+EM GL +D FT
Sbjct: 194 ----------RVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTL 243
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS-IKYAESVFRTMA 236
SVLTA L L G Q H +I+ N VGS L+D+Y KC + VF +
Sbjct: 244 ASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEIT 303
Query: 237 WKNVVSWTAMLVGYGQNG-CSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
++V W M+ GY QN E+A++ F MQ G P+D + VIS+C+NL+S +G
Sbjct: 304 EPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGK 363
Query: 296 QFHGRSLVTGLIS-FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
Q H +L + + S I+V NAL+ Y KCGN++D+ RLF+ M + VS ++++GYA+
Sbjct: 364 QIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQH 423
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G E++ LF+ ML + P +T I VLSAC+ G VE+G +YF +M +++ I P +H
Sbjct: 424 GIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEH 483
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
Y+CMID+L RAG+L EA++ I +MPF P +IGWA+LL +CR HGN+E+ AA +L+L+
Sbjct: 484 YSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLE 543
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS 534
P N A YV+LS++YAS G+W+ V+ +R+ MR++GV+K PGCSWI+ K R+H+F A+D S
Sbjct: 544 PSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSH 603
Query: 535 PYSDQIYAELEKLNRKMIKEGYVPDMSSVL---HDVELSEKIKMLNHHSEKLAIAFGLLF 591
P +IY LE+++ KM + GYVPD+ L EK L HHSEKLA+AFGL+
Sbjct: 604 PMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLIS 663
Query: 592 IPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G P+ VVKNLR+C DCHNA K+IS I REI VRDA RFH FK G+CSCGD+W
Sbjct: 664 TKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 267/706 (37%), Positives = 403/706 (57%), Gaps = 65/706 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG-RQ 63
+G WN ++ + S A+ +Y LM+K+ +G T+ +++ + + R ++ G ++
Sbjct: 105 NGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGP-DNYTYP-LVVQACAVRLLEFGGKE 162
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDE--------------------- 102
IH H+LK GF S V+V + L++MYA G + DA++ FDE
Sbjct: 163 IHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGD 222
Query: 103 ----------LPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQN 152
+P++NIV N+MI L + G V E+ +LF M +KD +SW+ +I+G QN
Sbjct: 223 VEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQN 282
Query: 153 GLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVG 212
G+ EA+ +F EM G+ +D+ SVL+AC L ++ GK IH +IR + V +
Sbjct: 283 GMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQ 342
Query: 213 SALVDMYC-------------------------------KCKSIKYAESVFRTMAWKNVV 241
+AL+ MY KC S++ A ++F M K++V
Sbjct: 343 NALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIV 402
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW+A++ GY Q+ C E + +F MQ I PD+ L SVIS+C +LA+L++G H
Sbjct: 403 SWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYI 462
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
GL + + L+ Y KCG +E++ +FN M + SW AL+ G A G ++
Sbjct: 463 RKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSL 522
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
D+F +M ++G+ P+E+T +GVL AC GLV++GR +F M++++GI P HY CM+D+
Sbjct: 523 DMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDL 582
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
L RAG L EA+ I MP PD W LL +C+ HG+ E+G+ L+EL P + +
Sbjct: 583 LGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFH 642
Query: 482 VLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIY 541
VLLS+I+ASKG W+ V ++R M+++GV K PGCS I+ VH F A D + P+ +++
Sbjct: 643 VLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVE 702
Query: 542 AELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVV 601
L ++ +++ EGY PD + V D++ EK L HSEKLAIAFGLL I P PIR++
Sbjct: 703 GMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIM 762
Query: 602 KNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLR+C+DCH A K ISK REI+VRD RFH FK G CSC D+W
Sbjct: 763 KNLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGACSCMDYW 808
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 189/391 (48%), Gaps = 48/391 (12%)
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
++ S ++F +++ + W TM+ +Q+ +A+ L++ M + D +T+ V+ A
Sbjct: 91 LDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQA 150
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C L GK+IH +++ +V+V + L++MY C +++ A +F + VSW
Sbjct: 151 CAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSW 210
Query: 244 TAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL 302
++L GY + G EEA IF M QRN
Sbjct: 211 NSILAGYVKKGDVEEAKLIFDQMPQRN--------------------------------- 237
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
I SN+++ GK G + ++ +LFNEM+ +D VSW+AL+SGY + G E +
Sbjct: 238 -------IVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALV 290
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL 422
+F +M ++G++ DEV ++ VLSAC+ +V+ G+ ++++ GI + +I +
Sbjct: 291 MFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIR-MGIESYVNLQNALIHMY 349
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP-YNPASY 481
S +G + +A+ N D I W +++S C G+VE A +L ++ P + S+
Sbjct: 350 SGSGEIMDAQKLFNG-SHNLDQISWNSMISGCMKCGSVE----KARALFDVMPEKDIVSW 404
Query: 482 VLLSSIYASKGKWDHVSQLRRTMREKGVRKD 512
+ S YA + L M+ +R D
Sbjct: 405 SAVISGYAQHDCFSETLALFHEMQLGQIRPD 435
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 118/516 (22%), Positives = 215/516 (41%), Gaps = 132/516 (25%)
Query: 44 TFSTMLIMSSSRRCVDLGR--QIHGHILKFGFGSYVFVGSPLVDMYAK---LGLIYDAKR 98
T + ++ + C +L + +I ++ GF S F S L+ +GL Y +
Sbjct: 38 TITLSILETHLHNCHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQI 97
Query: 99 GFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREA 158
FD + N M+NTM+ ++ E +A
Sbjct: 98 -FDRIENSNGFMWNTMMRAYIQSNSAE-------------------------------KA 125
Query: 159 IDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDM 218
+ L++ M + D +T+ V+ AC L GK+IH +++ +V+V + L++M
Sbjct: 126 LLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINM 185
Query: 219 YCKCKS-------------------------------IKYAESVFRTMAWKNVVS----- 242
Y C + ++ A+ +F M +N+V+
Sbjct: 186 YAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMI 245
Query: 243 --------------------------WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDF 276
W+A++ GY QNG EEA+ +F M NG+ D+
Sbjct: 246 VLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEV 305
Query: 277 TLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYG--------------- 321
+ SV+S+CA+L+ ++ G HG + G+ S++ + NAL+ Y
Sbjct: 306 VVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGS 365
Query: 322 ----------------KCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
KCG++E + LF+ M +D VSW+A++SGYA+ +ET+ LF
Sbjct: 366 HNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFH 425
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
+M ++PDE L+ V+SAC+ +++G+ + +++ G++ T ++D+ +
Sbjct: 426 EMQLGQIRPDETILVSVISACTHLAALDQGK-WVHAYIRKNGLKVNVILGTTLLDMYMKC 484
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
G +E A N M W L+ ++G VE
Sbjct: 485 GCVENALEVFNGME-EKGVSSWNALIIGLAVNGLVE 519
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 125/269 (46%), Gaps = 44/269 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRC--- 57
MP D VSW+ +ISG+A H ++ + +++ M L +I +++S C
Sbjct: 396 MPEKDIVSWSAVISGYAQHDCFSETLALFHEM------QLGQIRPDETILVSVISACTHL 449
Query: 58 --VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
+D G+ +H +I K G V +G+ L+DMY K G + +A F+ + EK + +N +I
Sbjct: 450 AALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALI 509
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
GL GLVE S +D+F EM+ G+ ++
Sbjct: 510 IGLAVNGLVERS-------------------------------LDMFSEMKNNGVIPNEI 538
Query: 176 TFGSVLTACGGLLALEEGK-QIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
TF VL AC + ++EG+ + I ++ + NV +VD+ + + AE + +
Sbjct: 539 TFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIES 598
Query: 235 MAWK-NVVSWTAMLVGYGQNGCSEEAVKI 262
M +V +W A+L ++G +E ++
Sbjct: 599 MPMAPDVATWGALLGACKKHGDTEMGERV 627
>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
Length = 708
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 242/586 (41%), Positives = 368/586 (62%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
RQ+H G + F + L+ YA LG + A+ F+ +P +N++ +N + G ++
Sbjct: 123 RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKN 182
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G + +R+LF M +++ +W M+ GL G + E++ F +MR EG+ D+F GSV
Sbjct: 183 GDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVF 242
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
C GL + G+Q+HA+++R+ ++ VGS+L MY +C ++ E+V R + ++V
Sbjct: 243 RCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIV 302
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
S ++ G QNG SE A++ FC M+ G+ D T S ISSC++LA+L +G Q HG+
Sbjct: 303 SCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQV 362
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ G+ + V LV Y +CG + DS R+F D +A++S Y G + I
Sbjct: 363 MKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAI 422
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
+LF++M++ G +P +VT + +L ACS +GL E+G FE+M K YG++P HYTC++D+
Sbjct: 423 ELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDL 482
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
L R+G L+EA++ I MP PD + W TLLS+C+ N ++ + A+ ++ELDP++ ASY
Sbjct: 483 LGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASY 542
Query: 482 VLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIY 541
VLLS+I A+ +W VS++R+ MR+ VRK+PG SW++ K +H F D S P +I
Sbjct: 543 VLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEID 602
Query: 542 AELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVV 601
LE++ K+ + GY PDMS VLHD+E EK L+HHSEKLAIAF L +P G+PIRV+
Sbjct: 603 ECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVM 662
Query: 602 KNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCH A K +S++T REI+VRD RFH FK+G CSC D+W
Sbjct: 663 KNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 708
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 170/377 (45%), Gaps = 38/377 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +WN +++G + G +++ + M ++G+ + ++ + R V
Sbjct: 195 MPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGM-HPDEFGLGSVFRCCAGLRDVVT 253
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H ++++ G + VGS L MY + G + + + LP +IV N
Sbjct: 254 GRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCN-------- 305
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
T+I G QNG A++ F MR G+A D TF S
Sbjct: 306 -----------------------TIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSA 342
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+++C L AL +G+QIH +++ V V + LV MY +C + +E VF +
Sbjct: 343 ISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDT 402
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
+AM+ YG +G ++A+++F M G EP D T +++ +C++ EEG F
Sbjct: 403 FLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFEL 462
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKAN 358
+ G+ + +V G+ G ++++ L M + D V W L+S K
Sbjct: 463 MTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSAC----KTQ 518
Query: 359 ETIDLFEKMLSHGLKPD 375
+ D+ E++ ++ D
Sbjct: 519 KNFDMAERIAKRVIELD 535
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 127/287 (44%), Gaps = 35/287 (12%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
F + AC L L +Q+HAF + + F + L+ Y + A +F +
Sbjct: 109 FSHLFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 165
Query: 237 WKNVVSWTAMLVGYGQN-------------------------------GCSEEAVKIFCN 265
+NV+SW + GY +N G EE++ F +
Sbjct: 166 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLD 225
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M+R G+ PD+F LGSV CA L + G Q H + +GL + V ++L Y +CG
Sbjct: 226 MRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGC 285
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+++ + + VS +++G + G + ++ F M S G+ D VT + +S+
Sbjct: 286 LQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISS 345
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAK 432
CS + +G+ ++K G+ + TC++ + SR G L +++
Sbjct: 346 CSDLAALAQGQQIHGQVMKA-GVDKVVPVMTCLVHMYSRCGCLGDSE 391
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 145/365 (39%), Gaps = 71/365 (19%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P VS N +I+G +G A++ + +M G+ +TF + + S +
Sbjct: 296 LPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAA-DVVTFVSAISSCSDLAALAQ 354
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIHG ++K G V V + LV MY++ G + D
Sbjct: 355 GQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGD------------------------- 389
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
S R+F G D+ + MI+ +G ++AI+LF++M G TF ++
Sbjct: 390 ------SERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLAL 443
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC EEG + + Y S+K+
Sbjct: 444 LYACSHSGLKEEGMDCFELMTKT---------------YGMQPSVKH------------- 475
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+T ++ G++GC +EA + +M + PD +++S+C + + + R
Sbjct: 476 --YTCVVDLLGRSGCLDEAEALILSMP---LTPDGVIWKTLLSACKTQKNFDMAERIAKR 530
Query: 301 SLVTGL---ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE--VSWTALVSGYAKFG 355
+ S++ +SN T + G++ + + + NVR E VSW L +F
Sbjct: 531 VIELDPHDSASYVLLSNIRATSR-RWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFC 589
Query: 356 KANET 360
+E+
Sbjct: 590 TGDES 594
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 256/642 (39%), Positives = 399/642 (62%), Gaps = 34/642 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLM-LKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIH 65
V WN+++ + + ++ +++ M +++ + N + T+ ++L ++LG QIH
Sbjct: 439 VLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN--QYTYPSILKTCIRLGDLELGEQIH 496
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
I+K F +V S L+DMYAKLG + +T L+R
Sbjct: 497 SQIIKTSFQLNAYVCSVLIDMYAKLGKL------------------DTAWDILIR----- 533
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
F G KD +SWTTMI G Q + +A+ FR+M G+ D+ + ++AC
Sbjct: 534 -----FAG---KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACA 585
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
GL AL+EG+QIHA + ++ +ALV +Y KC +I+ A F + ++W A
Sbjct: 586 GLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNA 645
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
++ G+ Q+G +EEA+++F M R GI+ ++FT GS + + + A++++G Q H TG
Sbjct: 646 LVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTG 705
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
S V NA+++ Y KCG+I D+ + F E+++++EVSW A+++ Y+K G +E +D F+
Sbjct: 706 YDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFD 765
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
+M+ ++P+ VTL+GVLSACS GLV+KG YFE M EYG+ P +HY C++D+L+RA
Sbjct: 766 QMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRA 825
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
G L AK FI +MP PDA+ W TLLS+C +H N+EIG++AA LLEL+P + A+YVLLS
Sbjct: 826 GLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLS 885
Query: 486 SIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELE 545
++YA KWD R+ M+EKGV+K+PG SWI+ K+ +H F D + P +D+I+ +
Sbjct: 886 NLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFK 945
Query: 546 KLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
L ++ + GYV D S+L +++ +K + HSEKLAI+FGLL +P +PI V+KNLR
Sbjct: 946 DLTKRASEIGYVQDCFSLLSELQQEQKDPTIFIHSEKLAISFGLLSLPATMPINVMKNLR 1005
Query: 606 VCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VC+DCH+ K++SK++ REI+VRDA RFH F+ G CSC D+W
Sbjct: 1006 VCNDCHDWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1047
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 137/458 (29%), Positives = 233/458 (50%), Gaps = 34/458 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D V++N LI+G + G A++++ M DGL S T +++++ SS +
Sbjct: 332 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSN-TLASLVVACSSDGTLFS 390
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H + K GF S + L+++YAK I A F E +N+V++N M L+
Sbjct: 391 GQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVM---LVA 447
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL+++ R FR +FR+M++E + +Q+T+ S+
Sbjct: 448 YGLLDDLRNSFR----------------------------IFRQMQIEEIVPNQYTYPSI 479
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C L LE G+QIH+ II+ + N +V S L+DMY K + A + A K+V
Sbjct: 480 LKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV 539
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWT M+ GY Q ++A+ F M GI D+ L + +S+CA L +L+EG Q H +
Sbjct: 540 VSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQ 599
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ V+G S + NALVT Y KCGNIE+++ F + D ++W ALVSG+ + G E
Sbjct: 600 ACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEA 659
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ +F +M G+ + T + A S +++G+ ++ K G + +I
Sbjct: 660 LRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNAIIS 718
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ ++ G + +AK ++ + + W ++++ HG
Sbjct: 719 MYAKCGSISDAKKQFLELSM-KNEVSWNAMINAYSKHG 755
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 218/456 (47%), Gaps = 41/456 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTML-IMSSSRRCVD 59
MP +WN +I AS ++ M+ + + + TFS +L D
Sbjct: 129 MPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENV-TPNEGTFSGVLEACRGGSVAFD 187
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+ QIH I+ G G V +PL+D+Y+
Sbjct: 188 VVEQIHARIIYQGLGKSTIVCNPLIDLYS------------------------------- 216
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
R G V+ +RR+F G+ KD SW MI+GL +N E EAI LF +M + G+ + F S
Sbjct: 217 RNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSS 276
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL+AC + +LE G+Q+H +++ + +V +ALV +Y S+ AE +F M+ ++
Sbjct: 277 VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRD 336
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
V++ ++ G Q G E+A+++F MQ +G+EPD TL S++ +C++ +L G Q H
Sbjct: 337 AVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHA 396
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ G S + AL+ Y KC +IE + F E V + V W ++ Y
Sbjct: 397 YTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRN 456
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH-YFEIMVKEYGIRPIHDHYTC- 417
+ +F +M + P++ T +L C R G +E G + +I+ + + + Y C
Sbjct: 457 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQL----NAYVCS 512
Query: 418 -MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ID+ ++ G+L+ A + + D + W T+++
Sbjct: 513 VLIDMYAKLGKLDTAWDILIRFA-GKDVVSWTTMIA 547
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 215/457 (47%), Gaps = 34/457 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D SW +ISG + + +A++++ M G+ + FS++L +++G Q+
Sbjct: 235 DHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMP-TPYAFSSVLSACKKIESLEIGEQL 293
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG +LK GF S +V + LV +Y LG + A+
Sbjct: 294 HGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEH-------------------------- 327
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+F M +D++++ T+I GL Q G +A++LF+ M+L+GL D T S++ AC
Sbjct: 328 -----IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVAC 382
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L G+Q+HA+ + N + AL+++Y KC I+ A + F +NVV W
Sbjct: 383 SSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWN 442
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
MLV YG + +IF MQ I P+ +T S++ +C L LE G Q H + + T
Sbjct: 443 VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT 502
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
V + L+ Y K G ++ + + +D VSWT +++GY ++ ++ + F
Sbjct: 503 SFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTF 562
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+ML G++ DEV L +SAC+ +++G+ G ++ + S+
Sbjct: 563 RQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYSK 621
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
G +EEA + D I W L+S + GN E
Sbjct: 622 CGNIEEAYLAFEQTE-AGDNIAWNALVSGFQQSGNNE 657
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 113/341 (33%), Positives = 173/341 (50%), Gaps = 32/341 (9%)
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
+D GR++H ILK GF + + L+D Y G + A + FDE+PE+ I +N MI
Sbjct: 84 LDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKE 143
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
L R L S ++F LF M E + ++ TF
Sbjct: 144 LASRSL---SGKVFC----------------------------LFGRMVNENVTPNEGTF 172
Query: 178 GSVLTAC-GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
VL AC GG +A + +QIHA II + V + L+D+Y + + A VF +
Sbjct: 173 SGVLEACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLY 232
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
K+ SW AM+ G +N C EA+++FC+M GI P + SV+S+C + SLE G Q
Sbjct: 233 LKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQ 292
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
HG L G S V NALV+ Y G++ + +F+ M+ RD V++ L++G ++ G
Sbjct: 293 LHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGY 352
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH 397
+ ++LF++M GL+PD TL ++ ACS G + G+
Sbjct: 353 GEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQ 393
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 160/348 (45%), Gaps = 34/348 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW +I+G+ + + A+ + ML G+ + + + + + + + G+QI
Sbjct: 538 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS-DEVGLTNAVSACAGLQALKEGQQI 596
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H GF S + + LV +Y+K G I +A F++ + + +N +++G + G
Sbjct: 597 HAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNN 656
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
EE+ R+F M RE ID + FTFGS + A
Sbjct: 657 EEALRVFARMN--------------------REGID-----------SNNFTFGSAVKAA 685
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+++GKQ+HA I + + V +A++ MY KC SI A+ F ++ KN VSW
Sbjct: 686 SETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWN 745
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHGRSLV 303
AM+ Y ++G EA+ F M + + P+ TL V+S+C+++ +++G + F +
Sbjct: 746 AMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTE 805
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
GL +V + G + + EM + D + W L+S
Sbjct: 806 YGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSA 853
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 137/306 (44%), Gaps = 12/306 (3%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
+L+EG+++H+ I++ +N + L+D Y + A VF M + + +W M+
Sbjct: 83 SLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIK 142
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC-ANLASLEEGTQFHGRSLVTGLI 307
S + +F M + P++ T V+ +C + + Q H R + GL
Sbjct: 143 ELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLG 202
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
V N L+ Y + G ++ + R+F+ + ++D SW A++SG +K E I LF M
Sbjct: 203 KSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDM 262
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC--MIDILSRA 425
G+ P VLSAC + +E G +++K G D Y C ++ +
Sbjct: 263 YVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK-LGFSS--DTYVCNALVSLYFHL 319
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL--LELDPYNPASYVL 483
G L A+ + M DA+ + TL++ G G+ A E ++LD P S L
Sbjct: 320 GSLISAEHIFSNMS-QRDAVTYNTLINGLSQCG---YGEKAMELFKRMQLDGLEPDSNTL 375
Query: 484 LSSIYA 489
S + A
Sbjct: 376 ASLVVA 381
>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 646
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 242/586 (41%), Positives = 368/586 (62%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
RQ+H G + F + L+ YA LG + A+ F+ +P +N++ +N + G ++
Sbjct: 61 RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKN 120
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G + +R+LF M +++ +W M+ GL G + E++ F +MR EG+ D+F GSV
Sbjct: 121 GDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVF 180
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
C GL + G+Q+HA+++R+ ++ VGS+L MY +C ++ E+V R + ++V
Sbjct: 181 RCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIV 240
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
S ++ G QNG SE A++ FC M+ G+ D T S ISSC++LA+L +G Q HG+
Sbjct: 241 SCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQV 300
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ G+ + V LV Y +CG + DS R+F D +A++S Y G + I
Sbjct: 301 MKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAI 360
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
+LF++M++ G +P +VT + +L ACS +GL E+G FE+M K YG++P HYTC++D+
Sbjct: 361 ELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDL 420
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
L R+G L+EA++ I MP PD + W TLLS+C+ N ++ + A+ ++ELDP++ ASY
Sbjct: 421 LGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASY 480
Query: 482 VLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIY 541
VLLS+I A+ +W VS++R+ MR+ VRK+PG SW++ K +H F D S P +I
Sbjct: 481 VLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEID 540
Query: 542 AELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVV 601
LE++ K+ + GY PDMS VLHD+E EK L+HHSEKLAIAF L +P G+PIRV+
Sbjct: 541 ECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVM 600
Query: 602 KNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCH A K +S++T REI+VRD RFH FK+G CSC D+W
Sbjct: 601 KNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 646
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 170/377 (45%), Gaps = 38/377 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +WN +++G + G +++ + M ++G+ + ++ + R V
Sbjct: 133 MPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGM-HPDEFGLGSVFRCCAGLRDVVT 191
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H ++++ G + VGS L MY + G + + + LP +IV N
Sbjct: 192 GRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCN-------- 243
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
T+I G QNG A++ F MR G+A D TF S
Sbjct: 244 -----------------------TIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSA 280
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+++C L AL +G+QIH +++ V V + LV MY +C + +E VF +
Sbjct: 281 ISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDT 340
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
+AM+ YG +G ++A+++F M G EP D T +++ +C++ EEG F
Sbjct: 341 FLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFEL 400
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKAN 358
+ G+ + +V G+ G ++++ L M + D V W L+S K
Sbjct: 401 MTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSAC----KTQ 456
Query: 359 ETIDLFEKMLSHGLKPD 375
+ D+ E++ ++ D
Sbjct: 457 KNFDMAERIAKRVIELD 473
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 149/346 (43%), Gaps = 41/346 (11%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
F + AC L L +Q+HAF + + F + L+ Y + A +F +
Sbjct: 47 FSHLFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 103
Query: 237 WKNVVSWTAMLVGYGQN-------------------------------GCSEEAVKIFCN 265
+NV+SW + GY +N G EE++ F +
Sbjct: 104 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLD 163
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M+R G+ PD+F LGSV CA L + G Q H + +GL + V ++L Y +CG
Sbjct: 164 MRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGC 223
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+++ + + VS +++G + G + ++ F M S G+ D VT + +S+
Sbjct: 224 LQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISS 283
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
CS + +G+ ++K G+ + TC++ + SR G L +++ D
Sbjct: 284 CSDLAALAQGQQIHGQVMKA-GVDKVVPVMTCLVHMYSRCGCLGDSERVFFGY-CGSDTF 341
Query: 446 GWATLLSSCRIHGNVEIGKWAAESLLEL--DPYNPASYVLLSSIYA 489
+ ++S+ HG+ G+ A E ++ P+ L+ +YA
Sbjct: 342 LLSAMISAYGFHGH---GQKAIELFKQMMNGGAEPSDVTFLALLYA 384
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 145/365 (39%), Gaps = 71/365 (19%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P VS N +I+G +G A++ + +M G+ +TF + + S +
Sbjct: 234 LPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAA-DVVTFVSAISSCSDLAALAQ 292
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIHG ++K G V V + LV MY++ G + D
Sbjct: 293 GQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGD------------------------- 327
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
S R+F G D+ + MI+ +G ++AI+LF++M G TF ++
Sbjct: 328 ------SERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLAL 381
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC EEG + + Y S+K+
Sbjct: 382 LYACSHSGLKEEGMDCFELMTKT---------------YGMQPSVKH------------- 413
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+T ++ G++GC +EA + +M + PD +++S+C + + + R
Sbjct: 414 --YTCVVDLLGRSGCLDEAEALILSMP---LTPDGVIWKTLLSACKTQKNFDMAERIAKR 468
Query: 301 SLVTGL---ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE--VSWTALVSGYAKFG 355
+ S++ +SN T + G++ + + + NVR E VSW L +F
Sbjct: 469 VIELDPHDSASYVLLSNIRATSR-RWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFC 527
Query: 356 KANET 360
+E+
Sbjct: 528 TGDES 532
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 260/663 (39%), Positives = 395/663 (59%), Gaps = 16/663 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN +I +A G A+++++ M + IT +L +S L
Sbjct: 188 MPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSL 247
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q HG + +FVG+ LVDMYAK G++ +A F +P K++V +N M+ G +
Sbjct: 248 GKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQ 307
Query: 121 RGLVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
G E++ RLF M+++ D ++W+ I+G Q GL EA+ + R+M G+ ++ T
Sbjct: 308 IGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVT 367
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIR-------NDHKDNVFVGSALVDMYCKCKSIKYAE 229
SVL+ C + AL GK+IH + I+ N H D V + L+DMY KCK + A
Sbjct: 368 LISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIAR 427
Query: 230 SVFRTMAWK--NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE--PDDFTLGSVISSC 285
++F +++ K +VV+WT M+ GY Q+G + +A+++ M + P+ FT+ + +C
Sbjct: 428 AMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVAC 487
Query: 286 ANLASLEEGTQFHGRSLVTGLISF-ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
A+LA+L G Q H +L + + VSN L+ Y KCG+I D+ +F+ M ++EV+W
Sbjct: 488 ASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTW 547
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
T+L++GY G E + +FE+M G K D VTL+ VL ACS +G++++G YF M
Sbjct: 548 TSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKT 607
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
++G+ P +HY C++D+L RAGRL A I +MP P + W LLS CRIHG VE+G+
Sbjct: 608 DFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGE 667
Query: 465 WAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRV 524
+AA+ + EL N SY LLS++YA+ G+W V+++R MR KG++K PGCSW++
Sbjct: 668 YAAKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGT 727
Query: 525 HIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLA 584
F D + P++ +IY L +++ GYVP+ LHDV+ EK +L HSEKLA
Sbjct: 728 TTFFVGDKTHPHAKEIYQVLSDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLA 787
Query: 585 IAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCG 644
+A+G+L P G IR+ KNLRVC DCH A Y+S+I EI++RD+ RFH FKNG CSC
Sbjct: 788 LAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHEIILRDSSRFHHFKNGLCSCK 847
Query: 645 DFW 647
+W
Sbjct: 848 GYW 850
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/502 (26%), Positives = 221/502 (44%), Gaps = 90/502 (17%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN LI + ++G N + + LM TF + V G H
Sbjct: 95 WNSLIRSYGNNGRANKCLSSFCLMHSLSW-TPDNYTFPFVFKACGEISSVRCGDSSHALS 153
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
GF S VFVG+ LV MY++ G + DA++ FDE+P ++V
Sbjct: 154 RVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVV------------------- 194
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQFTFGSVLTACGGL 187
SW ++I + G + A+++F +M E G D T +VL C +
Sbjct: 195 ------------SWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASV 242
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
GKQ H F + ++ N+FVG+ LVDMY K + A +VF M K+VVSW AM+
Sbjct: 243 GTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMV 302
Query: 248 VGYGQNGCSEEAVKIFCNMQR-----------------------------------NGIE 272
GY Q G E+AV++F MQ +GI+
Sbjct: 303 AGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIK 362
Query: 273 PDDFTLGSVISSCANLASLEEGTQFHGRSL-------VTGLISFITVSNALVTFYGKCGN 325
P++ TL SV+S CA++ +L G + H ++ G V N L+ Y KC
Sbjct: 363 PNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKK 422
Query: 326 IEDSHRLFNEMNV--RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGL--KPDEVTLIG 381
++ + +F+ ++ RD V+WT ++ GY++ G AN+ ++L +M +P+ T+
Sbjct: 423 VDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISC 482
Query: 382 VLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY-----TCMIDILSRAGRLEEAKSFIN 436
L AC+ + G+ + Y +R + C+ID+ ++ G + +A+ +
Sbjct: 483 ALVACASLAALSIGKQ-----IHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFD 537
Query: 437 KMPFPPDAIGWATLLSSCRIHG 458
M + + W +L++ +HG
Sbjct: 538 NM-MEKNEVTWTSLMTGYGMHG 558
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 204/441 (46%), Gaps = 53/441 (12%)
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDS--ISWTTMITGLMQNGLEREAIDLFREMRLEGLA 171
+I+ + G + + L R D+ W ++I NG + + F M
Sbjct: 65 LISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWT 124
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
D +TF V ACG + ++ G HA NVFVG+ALV MY +C S+ A V
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKV 184
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN-GIEPDDFTLGSVISSCANLAS 290
F M +VVSW +++ Y + G + A+++F M G PDD TL +V+ CA++ +
Sbjct: 185 FDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGT 244
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
G QFHG ++ + +I + V N LV Y K G +++++ +F+ M V+D VSW A+V+G
Sbjct: 245 RSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAG 304
Query: 351 YAKFGKANETIDLFE-----------------------------------KMLSHGLKPD 375
Y++ G+ + + LFE +MLS G+KP+
Sbjct: 305 YSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364
Query: 376 EVTLIGVLSACSRAGLVEKGR--HYFEIM----VKEYGIRPIHDHYTCMIDILSRAGRLE 429
EVTLI VLS C+ G + G+ H + I +++ G + +ID+ ++ +++
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVD 424
Query: 430 EAKSFINKM-PFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD-PYNPASYVLLSSI 487
A++ + + P D + W ++ HG+ + E D P ++ + ++
Sbjct: 425 IARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCAL 484
Query: 488 YA-------SKGKWDHVSQLR 501
A S GK H LR
Sbjct: 485 VACASLAALSIGKQIHAYALR 505
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 153/307 (49%), Gaps = 12/307 (3%)
Query: 213 SALVDMYCKCKSIKYAESVFRTMAWKN--VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
S L+ Y + +A S+ R + V W +++ YG NG + + + FC M
Sbjct: 63 SHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLS 122
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
PD++T V +C ++S+ G H S VTG +S + V NALV Y +CG++ D+
Sbjct: 123 WTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDAR 182
Query: 331 RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH-GLKPDEVTLIGVLSACSRA 389
++F+EM V D VSW +++ YAK GK +++F KM + G +PD++TL+ VL C+
Sbjct: 183 KVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASV 242
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
G G+ + V I+ + C++D+ ++ G ++EA + + MP D + W
Sbjct: 243 GTRSLGKQFHGFAVTSEMIQNMFVG-NCLVDMYAKFGMMDEANTVFSNMPV-KDVVSWNA 300
Query: 450 LLSSC----RIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
+++ R V + + E +++D ++ + S YA +G + R M
Sbjct: 301 MVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAI---SGYAQRGLGYEALGVCRQML 357
Query: 506 EKGVRKD 512
G++ +
Sbjct: 358 SSGIKPN 364
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 271/642 (42%), Positives = 375/642 (58%), Gaps = 38/642 (5%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDG-LGNLSRITFSTMLIMSSSRRCVDL--GRQIH 65
WN +I G S+ +DA++ Y LM +G L N F+ ++ + R +DL G +IH
Sbjct: 80 WNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPN----NFTFPFVLKACARLLDLQLGVKIH 135
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
++K GF VFV + LV +YAK G + DA + FD++P
Sbjct: 136 TLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIP--------------------- 174
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
DK+ +SWT +I+G + G REAID+FR + LA D FT VL+AC
Sbjct: 175 ----------DKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACT 224
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
L L G+ IH I+ NVFVG++LVDMY KC +++ A SVF M K++VSW A
Sbjct: 225 QLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGA 284
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
M+ GY NG +EA+ +F MQR ++PD +T+ V+S+CA L +LE G G
Sbjct: 285 MIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNE 344
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
+ + AL+ Y KCG++ + +F M +D V W A++SG A G + LF
Sbjct: 345 FLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFG 404
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
++ G+KPD T IG+L C+ AGLV++GR YF M + + + P +HY CM+D+L RA
Sbjct: 405 QVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRA 464
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
G L+EA I MP +AI W LL +CRIH + ++ + A + L+EL+P+N +YVLLS
Sbjct: 465 GLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLS 524
Query: 486 SIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELE 545
+IY++ KWD +++R +M EK ++K PGCSWI+ VH F D P S++IYA+L+
Sbjct: 525 NIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLD 584
Query: 546 KLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
+L +KM GYVP VL D+E EK L HSEKLAIAFGL+ P IRVVKNLR
Sbjct: 585 ELTKKMKVAGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKNLR 644
Query: 606 VCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VC DCH A K IS IT REI VRD RFH F+ G CSC D+W
Sbjct: 645 VCGDCHMAIKLISSITGREITVRDNNRFHCFREGSCSCNDYW 686
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/337 (35%), Positives = 184/337 (54%), Gaps = 4/337 (1%)
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+R LF +K + W TMI GL+ N +AI+ + MR EG + FTF VL AC
Sbjct: 65 TRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACAR 124
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
LL L+ G +IH +++ +VFV ++LV +Y KC ++ A VF + KNVVSWTA+
Sbjct: 125 LLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAI 184
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ GY G EA+ +F + + PD FT+ V+S+C L L G H + G+
Sbjct: 185 ISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGM 244
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ + V +LV Y KCGN+E + +F+ M +D VSW A++ GYA G E IDLF +
Sbjct: 245 VRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQ 304
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK-EYGIRPIHDHYTCMIDILSRA 425
M +KPD T++GVLSAC+R G +E G ++ + E+ P+ T +ID+ ++
Sbjct: 305 MQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLG--TALIDLYAKC 362
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
G + A M D + W ++S ++G V+I
Sbjct: 363 GSMSRAWEVFKGMK-EKDRVVWNAIISGLAMNGYVKI 398
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 186/372 (50%), Gaps = 39/372 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + VSW +ISG+ G +A+ ++ +L+ NL+ +F+ + ++S+ + DL
Sbjct: 173 IPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLE---MNLAPDSFTIVRVLSACTQLGDL 229
Query: 61 --GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G IH I++ G VFVG+ LVDMYAK G + A+ FD +PEK+IV + MI G
Sbjct: 230 NSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGY 289
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
G L +EAIDLF +M+ E + D +T
Sbjct: 290 ALNG-------------------------------LPKEAIDLFLQMQRENVKPDCYTVV 318
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
VL+AC L ALE G+ + + RN+ N +G+AL+D+Y KC S+ A VF+ M K
Sbjct: 319 GVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEK 378
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-F 297
+ V W A++ G NG + + +F +++ GI+PD T ++ C + ++EG + F
Sbjct: 379 DRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYF 438
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGK 356
+ L I +V G+ G ++++H+L M + + + W AL+ G + +
Sbjct: 439 NSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALL-GACRIHR 497
Query: 357 ANETIDLFEKML 368
+ +L K L
Sbjct: 498 DTQLAELALKQL 509
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 161/333 (48%), Gaps = 42/333 (12%)
Query: 215 LVDMYCKCK----SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
L++M +C Y +F + N+ W M+ G N C ++A++ + M+ G
Sbjct: 48 LLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEG 107
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
P++FT V+ +CA L L+ G + H + G + V +LV Y KCG +ED+H
Sbjct: 108 FLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAH 167
Query: 331 RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
++F+++ ++ VSWTA++SGY GK E ID+F ++L L PD T++ VLSAC++ G
Sbjct: 168 KVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLG 227
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP----------- 439
+ G + +++ +R + T ++D+ ++ G +E+A+S + MP
Sbjct: 228 DLNSGEWIHKCIMEMGMVRNVFVG-TSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMI 286
Query: 440 -----------------------FPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP- 475
PD +LS+C G +E+G+W + L++ +
Sbjct: 287 QGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVS-GLVDRNEF 345
Query: 476 -YNPASYVLLSSIYASKGKWDHVSQLRRTMREK 507
YNP L +YA G ++ + M+EK
Sbjct: 346 LYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEK 378
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 130/285 (45%), Gaps = 22/285 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRR--CV 58
MP D VSW +I G+A +G +A+ ++ M ++ N+ ++ + ++S+ R +
Sbjct: 274 MPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRE---NVKPDCYTVVGVLSACARLGAL 330
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
+LG + G + + F +G+ L+D+YAK G + A F + EK+ V++N +I+GL
Sbjct: 331 ELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGL 390
Query: 119 LRRGLVEESRRLFRGMKDK-----DSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAM 172
G V+ S LF G +K D ++ ++ G GL E F M R L
Sbjct: 391 AMNGYVKISFGLF-GQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTP 449
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRN-DHKDNVFVGSALVDMYCKCKSIKYAESV 231
+G ++ G L+E Q +IRN + N V AL+ + + AE
Sbjct: 450 SIEHYGCMVDLLGRAGLLDEAHQ----LIRNMPMEANAIVWGALLGACRIHRDTQLAELA 505
Query: 232 FRTM----AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE 272
+ + W N ++ + Y N +EA K+ +M I+
Sbjct: 506 LKQLIELEPW-NSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQ 549
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 255/642 (39%), Positives = 398/642 (61%), Gaps = 34/642 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLM-LKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIH 65
V WN+++ + + ++ +++ M +++ + N + T+ ++L ++LG QIH
Sbjct: 456 VLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN--QYTYPSILKTCIRLGDLELGEQIH 513
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
I+K F +V S L+DMYAKLG + +T L+R
Sbjct: 514 SQIIKTNFQLNAYVCSVLIDMYAKLGKL------------------DTAWDILIR----- 550
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
F G KD +SWTTMI G Q + +A+ FR+M G+ D+ + ++AC
Sbjct: 551 -----FAG---KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACA 602
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
GL AL+EG+QIHA + ++ +ALV +Y +C I+ + F + ++W A
Sbjct: 603 GLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNA 662
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
++ G+ Q+G +EEA+++F M R GI+ ++FT GS + + + A++++G Q H TG
Sbjct: 663 LVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTG 722
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
S V NAL++ Y KCG+I D+ + F E++ ++EVSW A+++ Y+K G +E +D F+
Sbjct: 723 YDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFD 782
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
+M+ ++P+ VTL+GVLSACS GLV+KG YFE M EYG+ P +HY C++D+L+RA
Sbjct: 783 QMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRA 842
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
G L AK FI +MP PDA+ W TLLS+C +H N+EIG++AA LLEL+P + A+YVLLS
Sbjct: 843 GLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLS 902
Query: 486 SIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELE 545
++YA KWD R+ M+EKGV+K+PG SWI+ K+ +H F D + P +D+I+ +
Sbjct: 903 NLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQ 962
Query: 546 KLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
L ++ + GYV D S+L++++ +K ++ HSEKLAI+FGLL +P +PI V+KNLR
Sbjct: 963 DLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLR 1022
Query: 606 VCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VC+DCH K++SK++ REI+VRDA RFH F+ G CSC D+W
Sbjct: 1023 VCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 233/459 (50%), Gaps = 36/459 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D V++N LI+G + G A++++ M DGL S T +++++ S+ +
Sbjct: 349 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSN-TLASLVVACSADGTLFR 407
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H + K GF S + L+++YAK I A F E +N+V++N M L+
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVM---LVA 464
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL+++ R FR +FR+M++E + +Q+T+ S+
Sbjct: 465 YGLLDDLRNSFR----------------------------IFRQMQIEEIVPNQYTYPSI 496
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C L LE G+QIH+ II+ + + N +V S L+DMY K + A + A K+V
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV 556
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWT M+ GY Q ++A+ F M GI D+ L + +S+CA L +L+EG Q H +
Sbjct: 557 VSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQ 616
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ V+G S + NALVT Y +CG IE+S+ F + D ++W ALVSG+ + G E
Sbjct: 617 ACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEA 676
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ +F +M G+ + T + A S +++G+ ++ K G + +I
Sbjct: 677 LRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALIS 735
Query: 421 ILSRAGRLEEA-KSFINKMPFPPDAIGWATLLSSCRIHG 458
+ ++ G + +A K F+ + + W ++++ HG
Sbjct: 736 MYAKCGSISDAEKQFLEVS--TKNEVSWNAIINAYSKHG 772
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 214/457 (46%), Gaps = 34/457 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D SW +ISG + + +A++++ M G+ + FS++L +++G Q+
Sbjct: 252 DHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMP-TPYAFSSVLSACKKIESLEIGEQL 310
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG +LK GF S +V + LV +Y LG + A+
Sbjct: 311 HGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEH-------------------------- 344
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+F M +D++++ T+I GL Q G +A++LF+ M L+GL D T S++ AC
Sbjct: 345 -----IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 399
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L G+Q+HA+ + N + AL+++Y KC I+ A F +NVV W
Sbjct: 400 SADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWN 459
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
MLV YG + +IF MQ I P+ +T S++ +C L LE G Q H + + T
Sbjct: 460 VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT 519
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
V + L+ Y K G ++ + + +D VSWT +++GY ++ ++ + F
Sbjct: 520 NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTF 579
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+ML G++ DEV L +SAC+ +++G+ G ++ + SR
Sbjct: 580 RQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYSR 638
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
G++EE+ + D I W L+S + GN E
Sbjct: 639 CGKIEESYLAFEQTE-AGDNIAWNALVSGFQQSGNNE 674
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 218/456 (47%), Gaps = 41/456 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTML-IMSSSRRCVD 59
MP +WN +I AS + + ++ M+ + + + TFS +L D
Sbjct: 146 MPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENV-TPNEGTFSGVLEACRGGSVAFD 204
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+ QIH IL G V +PL+D+Y+
Sbjct: 205 VVEQIHARILYQGLRDSTVVCNPLIDLYS------------------------------- 233
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
R G V+ +RR+F G++ KD SW MI+GL +N E EAI LF +M + G+ + F S
Sbjct: 234 RNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSS 293
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL+AC + +LE G+Q+H +++ + +V +ALV +Y ++ AE +F M+ ++
Sbjct: 294 VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRD 353
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
V++ ++ G Q G E+A+++F M +G+EPD TL S++ +C+ +L G Q H
Sbjct: 354 AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 413
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ G S + AL+ Y KC +IE + F E V + V W ++ Y
Sbjct: 414 YTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRN 473
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH-YFEIMVKEYGIRPIHDHYTC- 417
+ +F +M + P++ T +L C R G +E G + +I+ + + + Y C
Sbjct: 474 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL----NAYVCS 529
Query: 418 -MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ID+ ++ G+L+ A + + D + W T+++
Sbjct: 530 VLIDMYAKLGKLDTAWDILIRFA-GKDVVSWTTMIA 564
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 114/341 (33%), Positives = 173/341 (50%), Gaps = 32/341 (9%)
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
+D GR++H ILK G S + L D Y G +Y A + FDE+PE+ I +N MI
Sbjct: 101 LDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKE 160
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
L R L+ E LF M E + ++ TF
Sbjct: 161 LASRNLI-------------------------------GEVFGLFVRMVSENVTPNEGTF 189
Query: 178 GSVLTAC-GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
VL AC GG +A + +QIHA I+ +D+ V + L+D+Y + + A VF +
Sbjct: 190 SGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR 249
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
K+ SW AM+ G +N C EA+++FC+M GI P + SV+S+C + SLE G Q
Sbjct: 250 LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQ 309
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
HG L G S V NALV+ Y GN+ + +F+ M+ RD V++ L++G ++ G
Sbjct: 310 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGY 369
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH 397
+ ++LF++M GL+PD TL ++ ACS G + +G+
Sbjct: 370 GEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 410
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 159/348 (45%), Gaps = 34/348 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW +I+G+ + + A+ + ML G+ + + + + + + + G+QI
Sbjct: 555 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS-DEVGLTNAVSACAGLQALKEGQQI 613
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H GF S + + LV +Y++ G I ++ F++ + + +N +++G
Sbjct: 614 HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSG------- 666
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
Q+G EA+ +F M EG+ + FTFGS + A
Sbjct: 667 ------------------------FQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAA 702
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+++GKQ+HA I + + V +AL+ MY KC SI AE F ++ KN VSW
Sbjct: 703 SETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWN 762
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQFHGRSLV 303
A++ Y ++G EA+ F M + + P+ TL V+S+C+++ +++G F +
Sbjct: 763 AIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSE 822
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
GL +V + G + + EM ++ D + W L+S
Sbjct: 823 YGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSA 870
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 133/306 (43%), Gaps = 12/306 (3%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
+L+EG+++H+ I++ N + L D Y + A VF M + + +W M+
Sbjct: 100 SLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIK 159
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC-ANLASLEEGTQFHGRSLVTGLI 307
E +F M + P++ T V+ +C + + Q H R L GL
Sbjct: 160 ELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLR 219
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
V N L+ Y + G ++ + R+F+ + ++D SW A++SG +K E I LF M
Sbjct: 220 DSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDM 279
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC--MIDILSRA 425
G+ P VLSAC + +E G +++K G D Y C ++ +
Sbjct: 280 YVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK-LGFSS--DTYVCNALVSLYFHL 336
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL--LELDPYNPASYVL 483
G L A+ + M DA+ + TL++ G G+ A E + LD P S L
Sbjct: 337 GNLISAEHIFSNMS-QRDAVTYNTLINGLSQCG---YGEKAMELFKRMHLDGLEPDSNTL 392
Query: 484 LSSIYA 489
S + A
Sbjct: 393 ASLVVA 398
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 252/647 (38%), Positives = 392/647 (60%), Gaps = 33/647 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + S N L+SG + + ++ +L +G + TF ++L +S+ ++
Sbjct: 151 MMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGF-EPNMYTFISILKTCASKGDLNE 209
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ IHG ++K G + + LV++YAK G A + F E+PE+
Sbjct: 210 GKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPER-------------- 255
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
D +SWT +ITG + G + +F +M EG + +TF S+
Sbjct: 256 -----------------DVVSWTALITGFVAEGY-GSGLRIFNQMLAEGFNPNMYTFISI 297
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L +C L ++ GKQ+HA I++N N FVG+ALVDMY K + ++ AE++F + +++
Sbjct: 298 LRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDL 357
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+WT ++ GY Q+G E+AVK F MQR G++P++FTL S +S C+ +A+L+ G Q H
Sbjct: 358 FAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSM 417
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ G + V++ALV Y KCG +ED+ +F+ + RD VSW ++ GY++ G+ +
Sbjct: 418 AIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKA 477
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ FE ML G PDEVT IGVLSACS GL+E+G+ +F + K YGI P +HY CM+D
Sbjct: 478 LKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVD 537
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
IL RAG+ E +SFI +M + + W T+L +C++HGN+E G+ AA L EL+P ++
Sbjct: 538 ILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSN 597
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
Y+LLS+++A+KG WD V+ +R M +GV+K+PGCSW++ +VH+F + D S P +I
Sbjct: 598 YILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREI 657
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
+ +L+ L++K++ GY P+ VLH+V EK ++L +HSE+LA+AF LL IR+
Sbjct: 658 HLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRI 717
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLR+C DCH+ K IS+IT +E++VRD FH FKNG CSC +FW
Sbjct: 718 FKNLRICGDCHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 764
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/472 (26%), Positives = 227/472 (48%), Gaps = 35/472 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D WN +S S + +AV+++ LM + L++ F++++ ++S
Sbjct: 50 MPIQDVQQWNQKLSSANSPYPLQEAVQLFYLMRHTRI-RLNQFIFASLISAAASLGDNHY 108
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G IH + K+GF S + + + V MY K + + + F + +N+ N +++G
Sbjct: 109 GESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCD 168
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
++ R+ L+Q + +EG + +TF S+
Sbjct: 169 TETCDQGPRI------------------LIQ-------------LLVEGFEPNMYTFISI 197
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C L EGK IH +I++ + + ++LV++Y KC S YA VF + ++V
Sbjct: 198 LKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDV 257
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWTA++ G+ G ++IF M G P+ +T S++ SC++L+ ++ G Q H +
Sbjct: 258 VSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQ 316
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ L V ALV Y K +ED+ +FN + RD +WT +V+GYA+ G+ +
Sbjct: 317 IVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKA 376
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ F +M G+KP+E TL LS CSR ++ GR + +K G + ++D
Sbjct: 377 VKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKA-GQSGDMFVASALVD 435
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLE 472
+ ++ G +E+A+ + + D + W T++ HG A E++L+
Sbjct: 436 MYAKCGCVEDAEVVFDGL-VSRDTVSWNTIICGYSQHGQGGKALKAFEAMLD 486
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 191/380 (50%), Gaps = 8/380 (2%)
Query: 110 MYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG 169
++++++ ++ ++ +R++ M +D W ++ +EA+ LF MR
Sbjct: 26 LWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQLFYLMRHTR 85
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
+ ++QF F S+++A L G+ IHA + + + ++ + +A V MY K +S++
Sbjct: 86 IRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGW 145
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
F+ M +N+ S +L G+ ++ +I + G EP+ +T S++ +CA+
Sbjct: 146 QFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKG 205
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
L EG HG+ + +G+ + N+LV Y KCG+ + ++F E+ RD VSWTAL++
Sbjct: 206 DLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALIT 265
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
G+ G + + +F +ML+ G P+ T I +L +CS V+ G+ +VK +
Sbjct: 266 GFVAEGYGS-GLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKN-SLD 323
Query: 410 PIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAES 469
T ++D+ ++ LE+A++ N++ D W +++ G G+ A +
Sbjct: 324 GNDFVGTALVDMYAKNRFLEDAETIFNRL-IKRDLFAWTVIVAGYAQDGQ---GEKAVKC 379
Query: 470 LLEL--DPYNPASYVLLSSI 487
+++ + P + L SS+
Sbjct: 380 FIQMQREGVKPNEFTLASSL 399
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 4/292 (1%)
Query: 194 KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQN 253
K+I +I+N + + S+LV++Y KC+S++ A V M ++V W L
Sbjct: 9 KKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSP 68
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVS 313
+EAV++F M+ I + F S+IS+ A+L G H G S I +S
Sbjct: 69 YPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILIS 128
Query: 314 NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLK 373
NA VT Y K ++E+ + F M + + S L+SG+ ++ + ++L G +
Sbjct: 129 NAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFE 188
Query: 374 PDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKS 433
P+ T I +L C+ G + +G+ ++K GI P + ++++ ++ G A
Sbjct: 189 PNMYTFISILKTCASKGDLNEGKAIHGQVIKS-GINPDSHLWNSLVNVYAKCGSANYACK 247
Query: 434 FINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
++P D + W L++ G + + L E +NP Y +S
Sbjct: 248 VFGEIP-ERDVVSWTALITGFVAEGYGSGLRIFNQMLAE--GFNPNMYTFIS 296
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 252/676 (37%), Positives = 391/676 (57%), Gaps = 66/676 (9%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VS+N L++G+ G +A+++Y+ M + + TF+T+L + +++R + GRQIH
Sbjct: 444 VSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHA 503
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
H+++ + V + LV MY++ G + AK F+ + E+N
Sbjct: 504 HLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERN------------------- 544
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+ SW +MI G QNG +EA+ LF++M+L G+ D F+ S+L++C
Sbjct: 545 ------------AYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVS 592
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYA------------------ 228
L ++G+++H FI+RN ++ + LVDMY KC S+ YA
Sbjct: 593 LSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVM 652
Query: 229 -------------ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDD 275
+++F M +N W ++L GY G +E+ F M + IE D
Sbjct: 653 VSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDV 712
Query: 276 FTLGSVISSCANLASLEEGTQFHGRSLVTGLISF-ITVSNALVTFYGKCGNIEDSHRLFN 334
T+ ++++ C++L +LE G Q H + G ++ + + ALV Y KCG I + +F+
Sbjct: 713 LTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFD 772
Query: 335 EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEK 394
MN ++ VSW A++SGY+K G + E + L+E+M G+ P+EVT + +LSACS GLVE+
Sbjct: 773 NMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEE 832
Query: 395 GRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
G F M ++Y I +HYTCM+D+L RAGRLE+AK F+ KMP P+ W LL +C
Sbjct: 833 GLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGAC 892
Query: 455 RIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPG 514
R+H ++++G+ AA+ L ELDP NP YV++S+IYA+ G+W V +R+ M+ KGV+KDPG
Sbjct: 893 RVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPG 952
Query: 515 CSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLH---DVELSE 571
SWI+ S + IF A + P +++IY L L + GY+PD S +L D++ E
Sbjct: 953 VSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEE 1012
Query: 572 KIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAV 631
+ + L HSE+LA++ GL+ +P IRV KNLR+C DCH ATK+ISKIT R I+ RD
Sbjct: 1013 EEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTN 1072
Query: 632 RFHLFKNGECSCGDFW 647
RFH F+NG+CSCGD+W
Sbjct: 1073 RFHHFENGKCSCGDYW 1088
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 138/483 (28%), Positives = 246/483 (50%), Gaps = 63/483 (13%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V+WN +IS A G NDA+ ++ M + G + +R ++L+ S+ + GR++HG
Sbjct: 343 VTWNSIISAEAQFGHFNDALVLFLRMQESGYKS-NRFNLGSILMASAGLADIGKGRELHG 401
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
H+++ S + +GS LVDMY+K G++ +A + F L E+N V YN ++ G ++ G EE
Sbjct: 402 HLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEE 461
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+ L+ M+ +D G+ DQFTF ++LT C
Sbjct: 462 ALELYHDMQSED------------------------------GIQPDQFTFTTLLTLCAN 491
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+G+QIHA +IR + N+ V + LV MY +C + YA+ +F MA +N SW +M
Sbjct: 492 QRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSM 551
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ GY QNG ++EA+++F MQ NGI+PD F+L S++SSC +L+ ++G + H + +
Sbjct: 552 IEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTM 611
Query: 307 ISFITVSNALVTFYGKCGNIE-------------------------------DSHRLFNE 335
+ LV Y KCG+++ D+ LF++
Sbjct: 612 EEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQ 671
Query: 336 MNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG 395
M R+ W ++++GYA G E+ + F +ML ++ D +T++ +++ CS +E G
Sbjct: 672 MEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHG 731
Query: 396 RHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCR 455
+++K+ + T ++D+ S+ G + +A++ + M + + W ++S
Sbjct: 732 DQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMN-GKNIVSWNAMISGYS 790
Query: 456 IHG 458
HG
Sbjct: 791 KHG 793
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 158/557 (28%), Positives = 272/557 (48%), Gaps = 74/557 (13%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V+WN +I+G+ S +A +++ MLK G+ TF++ L + + R D G+Q+H
Sbjct: 242 VTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCP-DNFTFASALRVCGALRSRDGGKQVHS 300
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++ GF FVG+ L+DMYAK + FDE+ E+N V +N
Sbjct: 301 KLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWN-------------- 346
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
++I+ Q G +A+ LF M+ G ++F GS+L A G
Sbjct: 347 -----------------SIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAG 389
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L + +G+++H ++RN ++ +GSALVDMY KC ++ A VFR++ +N VS+ A+
Sbjct: 390 LADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNAL 449
Query: 247 LVGYGQNGCSEEAVKIFCNMQ-RNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
L GY Q G +EEA++++ +MQ +GI+PD FT ++++ CAN + +G Q H +
Sbjct: 450 LAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRAN 509
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
+ I V LV Y +CG + + +FN M R+ SW +++ GY + G+ E + LF+
Sbjct: 510 ITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFK 569
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK----EYGIRPI--HDHY---- 415
+M +G+KPD +L +LS+C +KGR +V+ E GI + D Y
Sbjct: 570 QMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCG 629
Query: 416 --------------------TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCR 455
M+ +GR +AK+ ++M A+ W ++L+
Sbjct: 630 SMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTAL-WNSILAG-- 686
Query: 456 IHGNVEIGKWAAESLLEL----DPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRK 511
+ N + K + LE+ Y+ + V + ++ +S +H QL + +KG
Sbjct: 687 -YANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGF-- 743
Query: 512 DPGCSWIKYKSRVHIFS 528
CS + + V ++S
Sbjct: 744 -VNCSVVLETALVDMYS 759
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 156/528 (29%), Positives = 263/528 (49%), Gaps = 65/528 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLS-RITFSTMLIMSSSRRCV- 58
MP + +WN +I +A + +++Y M G GN S + TF +++ + C+
Sbjct: 135 MPERNLTAWNTMILAYARVDDYMEVLRLYGRM--RGSGNFSDKFTFPSVI-----KACIA 187
Query: 59 --DLG--RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTM 114
D+G RQ+ ++K G +FVG LVD YA+ G + DA DE+ ++V +N +
Sbjct: 188 MEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAV 247
Query: 115 ITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
I G ++ +SW EA +F M G+ D
Sbjct: 248 IAGYVK------------------ILSW-------------EEAWGIFDRMLKIGVCPDN 276
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
FTF S L CG L + + GKQ+H+ +I K + FVG+AL+DMY KC + VF
Sbjct: 277 FTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDE 336
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
M +N V+W +++ Q G +A+ +F MQ +G + + F LGS++ + A LA + +G
Sbjct: 337 MGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKG 396
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
+ HG + L S I + +ALV Y KCG +E++H++F + R+EVS+ AL++GY +
Sbjct: 397 RELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQE 456
Query: 355 GKANETIDLFEKMLSH-GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
GKA E ++L+ M S G++PD+ T +L+ C+ +GR +++ + I
Sbjct: 457 GKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIV 516
Query: 414 HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL--- 470
T ++ + S GRL AK N+M +A W +++ + +G + E+L
Sbjct: 517 E-TELVHMYSECGRLNYAKEIFNRMA-ERNAYSWNSMIEGYQQNGETQ------EALRLF 568
Query: 471 --LELDPYNPASYVLLSSIY-------ASKGKWDHVSQLRRTMREKGV 509
++L+ P + L S + + KG+ H +R TM E+G+
Sbjct: 569 KQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGI 616
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 201/416 (48%), Gaps = 43/416 (10%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYD---AKRGFDELPEKNIVMYNTMITG 117
G+ IH ++ G+ ++ + ++ +YA+ G + D A++ F+E+PE+N+ +NTMI
Sbjct: 90 GKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILA 149
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
R V++ + R L+ MR G D+FTF
Sbjct: 150 YAR---VDDYMEVLR----------------------------LYGRMRGSGNFSDKFTF 178
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
SV+ AC + + +Q+ + +++ N+FVG ALVD Y + + A + +
Sbjct: 179 PSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEG 238
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
+VV+W A++ GY + EEA IF M + G+ PD+FT S + C L S + G Q
Sbjct: 239 TSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQV 298
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H + + G V NAL+ Y KC + E ++F+EM R++V+W +++S A+FG
Sbjct: 299 HSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHF 358
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
N+ + LF +M G K + L +L A + + KGR +V+ I +
Sbjct: 359 NDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDI-ILGSA 417
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL 473
++D+ S+ G +EEA + + + + LL+ G V+ GK AE LEL
Sbjct: 418 LVDMYSKCGMVEEAHQVFRSL-LERNEVSYNALLA-----GYVQEGK--AEEALEL 465
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 3/218 (1%)
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIK---YA 228
++ + S++ C + + GK IH +I N + + ++ + ++ +Y + + YA
Sbjct: 69 VNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYA 128
Query: 229 ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL 288
+F M +N+ +W M++ Y + E ++++ M+ +G D FT SVI +C +
Sbjct: 129 RKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAM 188
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
+ Q + GL + V ALV Y + G ++D+ +E+ V+W A++
Sbjct: 189 EDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVI 248
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSAC 386
+GY K E +F++ML G+ PD T L C
Sbjct: 249 AGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVC 286
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 255/642 (39%), Positives = 398/642 (61%), Gaps = 34/642 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLM-LKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIH 65
V WN+++ + + ++ +++ M +++ + N + T+ ++L ++LG QIH
Sbjct: 416 VLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN--QYTYPSILKTCIRLGDLELGEQIH 473
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
I+K F +V S L+DMYAKLG + +T L+R
Sbjct: 474 SQIIKTNFQLNAYVCSVLIDMYAKLGKL------------------DTAWDILIR----- 510
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
F G KD +SWTTMI G Q + +A+ FR+M G+ D+ + ++AC
Sbjct: 511 -----FAG---KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACA 562
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
GL AL+EG+QIHA + ++ +ALV +Y +C I+ + F + ++W A
Sbjct: 563 GLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNA 622
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
++ G+ Q+G +EEA+++F M R GI+ ++FT GS + + + A++++G Q H TG
Sbjct: 623 LVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTG 682
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
S V NAL++ Y KCG+I D+ + F E++ ++EVSW A+++ Y+K G +E +D F+
Sbjct: 683 YDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFD 742
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
+M+ ++P+ VTL+GVLSACS GLV+KG YFE M EYG+ P +HY C++D+L+RA
Sbjct: 743 QMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRA 802
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
G L AK FI +MP PDA+ W TLLS+C +H N+EIG++AA LLEL+P + A+YVLLS
Sbjct: 803 GLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLS 862
Query: 486 SIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELE 545
++YA KWD R+ M+EKGV+K+PG SWI+ K+ +H F D + P +D+I+ +
Sbjct: 863 NLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQ 922
Query: 546 KLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
L ++ + GYV D S+L++++ +K ++ HSEKLAI+FGLL +P +PI V+KNLR
Sbjct: 923 DLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLR 982
Query: 606 VCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VC+DCH K++SK++ REI+VRDA RFH F+ G CSC D+W
Sbjct: 983 VCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1024
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 233/459 (50%), Gaps = 36/459 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D V++N LI+G + G A++++ M DGL S T +++++ S+ +
Sbjct: 309 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSN-TLASLVVACSADGTLFR 367
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H + K GF S + L+++YAK I A F E +N+V++N M L+
Sbjct: 368 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVM---LVA 424
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL+++ R FR +FR+M++E + +Q+T+ S+
Sbjct: 425 YGLLDDLRNSFR----------------------------IFRQMQIEEIVPNQYTYPSI 456
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C L LE G+QIH+ II+ + + N +V S L+DMY K + A + A K+V
Sbjct: 457 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV 516
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWT M+ GY Q ++A+ F M GI D+ L + +S+CA L +L+EG Q H +
Sbjct: 517 VSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQ 576
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ V+G S + NALVT Y +CG IE+S+ F + D ++W ALVSG+ + G E
Sbjct: 577 ACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEA 636
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ +F +M G+ + T + A S +++G+ ++ K G + +I
Sbjct: 637 LRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALIS 695
Query: 421 ILSRAGRLEEA-KSFINKMPFPPDAIGWATLLSSCRIHG 458
+ ++ G + +A K F+ + + W ++++ HG
Sbjct: 696 MYAKCGSISDAEKQFLEVS--TKNEVSWNAIINAYSKHG 732
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 215/461 (46%), Gaps = 34/461 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+ D SW +ISG + + +A++++ M G+ + FS++L +++
Sbjct: 208 LRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMP-TPYAFSSVLSACKKIESLEI 266
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+HG +LK GF S +V + LV +Y LG + A+
Sbjct: 267 GEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEH---------------------- 304
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+F M +D++++ T+I GL Q G +A++LF+ M L+GL D T S+
Sbjct: 305 ---------IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASL 355
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ AC L G+Q+HA+ + N + AL+++Y KC I+ A F +NV
Sbjct: 356 VVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENV 415
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V W MLV YG + +IF MQ I P+ +T S++ +C L LE G Q H +
Sbjct: 416 VLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQ 475
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ T V + L+ Y K G ++ + + +D VSWT +++GY ++ ++
Sbjct: 476 IIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKA 535
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ F +ML G++ DEV L +SAC+ +++G+ G ++
Sbjct: 536 LTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSSDLPFQNALVT 594
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+ SR G++EE+ + D I W L+S + GN E
Sbjct: 595 LYSRCGKIEESYLAFEQTE-AGDNIAWNALVSGFQQSGNNE 634
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 218/456 (47%), Gaps = 41/456 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTML-IMSSSRRCVD 59
MP +WN +I AS + + ++ M+ + + + TFS +L D
Sbjct: 106 MPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENV-TPNEGTFSGVLEACRGGSVAFD 164
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+ QIH IL G V +PL+D+Y+
Sbjct: 165 VVEQIHARILYQGLRDSTVVCNPLIDLYS------------------------------- 193
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
R G V+ +RR+F G++ KD SW MI+GL +N E EAI LF +M + G+ + F S
Sbjct: 194 RNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSS 253
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL+AC + +LE G+Q+H +++ + +V +ALV +Y ++ AE +F M+ ++
Sbjct: 254 VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRD 313
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
V++ ++ G Q G E+A+++F M +G+EPD TL S++ +C+ +L G Q H
Sbjct: 314 AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 373
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ G S + AL+ Y KC +IE + F E V + V W ++ Y
Sbjct: 374 YTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRN 433
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH-YFEIMVKEYGIRPIHDHYTC- 417
+ +F +M + P++ T +L C R G +E G + +I+ + + + Y C
Sbjct: 434 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL----NAYVCS 489
Query: 418 -MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ID+ ++ G+L+ A + + D + W T+++
Sbjct: 490 VLIDMYAKLGKLDTAWDILIRFA-GKDVVSWTTMIA 524
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/341 (33%), Positives = 173/341 (50%), Gaps = 32/341 (9%)
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
+D GR++H ILK G S + L D Y G +Y A + FDE+PE+ I +N MI
Sbjct: 61 LDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKE 120
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
L R L+ E LF M E + ++ TF
Sbjct: 121 LASRNLI-------------------------------GEVFGLFVRMVSENVTPNEGTF 149
Query: 178 GSVLTAC-GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
VL AC GG +A + +QIHA I+ +D+ V + L+D+Y + + A VF +
Sbjct: 150 SGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR 209
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
K+ SW AM+ G +N C EA+++FC+M GI P + SV+S+C + SLE G Q
Sbjct: 210 LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQ 269
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
HG L G S V NALV+ Y GN+ + +F+ M+ RD V++ L++G ++ G
Sbjct: 270 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGY 329
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH 397
+ ++LF++M GL+PD TL ++ ACS G + +G+
Sbjct: 330 GEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 370
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 159/348 (45%), Gaps = 34/348 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW +I+G+ + + A+ + ML G+ + + + + + + + G+QI
Sbjct: 515 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS-DEVGLTNAVSACAGLQALKEGQQI 573
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H GF S + + LV +Y++ G I ++ F++ + + +N +++G
Sbjct: 574 HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSG------- 626
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
Q+G EA+ +F M EG+ + FTFGS + A
Sbjct: 627 ------------------------FQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAA 662
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+++GKQ+HA I + + V +AL+ MY KC SI AE F ++ KN VSW
Sbjct: 663 SETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWN 722
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQFHGRSLV 303
A++ Y ++G EA+ F M + + P+ TL V+S+C+++ +++G F +
Sbjct: 723 AIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSE 782
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
GL +V + G + + EM ++ D + W L+S
Sbjct: 783 YGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSA 830
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 133/306 (43%), Gaps = 12/306 (3%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
+L+EG+++H+ I++ N + L D Y + A VF M + + +W M+
Sbjct: 60 SLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIK 119
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC-ANLASLEEGTQFHGRSLVTGLI 307
E +F M + P++ T V+ +C + + Q H R L GL
Sbjct: 120 ELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLR 179
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
V N L+ Y + G ++ + R+F+ + ++D SW A++SG +K E I LF M
Sbjct: 180 DSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDM 239
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC--MIDILSRA 425
G+ P VLSAC + +E G +++K G D Y C ++ +
Sbjct: 240 YVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK-LGFSS--DTYVCNALVSLYFHL 296
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL--LELDPYNPASYVL 483
G L A+ + M DA+ + TL++ G G+ A E + LD P S L
Sbjct: 297 GNLISAEHIFSNMS-QRDAVTYNTLINGLSQCG---YGEKAMELFKRMHLDGLEPDSNTL 352
Query: 484 LSSIYA 489
S + A
Sbjct: 353 ASLVVA 358
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 259/643 (40%), Positives = 385/643 (59%), Gaps = 32/643 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D ++N++I G S ++A+ ++ M ++ + TF +L + S + + G QI
Sbjct: 88 DSPAYNIMIRGFTLKQSPHEAILLFKEMHENSV-QPDEFTFPCILKVCSRLQALSEGEQI 146
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H I+K GFGS+ FV + L+ MYA G V
Sbjct: 147 HALIMKCGFGSHGFVKNTLIHMYANCGE-------------------------------V 175
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
E +RR+F M +++ +W +M G ++G E + LF EM + D+ T SVLTAC
Sbjct: 176 EVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTAC 235
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G L LE G+ I+ ++ K N + ++LVDMY KC + A +F M ++VV+W+
Sbjct: 236 GRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWS 295
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
AM+ GY Q EA+ +F MQ+ I+P++ T+ S++SSCA L +LE G H
Sbjct: 296 AMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKK 355
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
+ +T+ AL+ FY KCG++E S +F +M V++ +SWT L+ G A G+ + ++ F
Sbjct: 356 RMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYF 415
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
ML ++P++VT IGVLSACS AGLV++GR F M +++GI P +HY CM+DIL R
Sbjct: 416 YLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGR 475
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG +EEA FI MP P+A+ W TLL+SC++H NVEIG+ + + L+ L+P + Y+LL
Sbjct: 476 AGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILL 535
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S+IYAS G+W+ ++R M+EKG++K PGCS I+ +H F A+D S++IY +
Sbjct: 536 SNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAI 595
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
E + +++ GYVP+ + D E +K ++HHSEKLAIAFGL+ PPG IR+ KNL
Sbjct: 596 EDMMKQIKSAGYVPNTAEARLDAEEDDKESSVSHHSEKLAIAFGLIKSPPGTTIRITKNL 655
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RVC+DCHNATK +SK+ REI+VRD RFH FK G CSC D+W
Sbjct: 656 RVCTDCHNATKLVSKVFNREIVVRDRTRFHHFKEGSCSCNDYW 698
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/341 (34%), Positives = 188/341 (55%), Gaps = 9/341 (2%)
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
+FR + + DS ++ MI G EAI LF+EM + D+FTF +L C L A
Sbjct: 80 IFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQA 139
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
L EG+QIHA I++ + FV + L+ MY C ++ A VF M+ +NV +W +M G
Sbjct: 140 LSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAG 199
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
Y ++G EE VK+F M I D+ TL SV+++C LA LE G + GL
Sbjct: 200 YTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGN 259
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
T+ +LV Y KCG ++ + RLF++M+ RD V+W+A++SGY++ + E +DLF +M
Sbjct: 260 PTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQK 319
Query: 370 HGLKPDEVTLIGVLSACSRAGLVEKGR--HYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
+ P+E+T++ +LS+C+ G +E G+ H+F +K+ ++ T ++D ++ G
Sbjct: 320 ANIDPNEITMVSILSSCAVLGALETGKWVHFF---IKKKRMKLTVTLGTALMDFYAKCGS 376
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
+E + KMP + + W L+ +G GK A E
Sbjct: 377 VESSIEVFGKMPV-KNVLSWTVLIQGLASNGQ---GKKALE 413
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 154/326 (47%), Gaps = 48/326 (14%)
Query: 180 VLTACGGLLALEEGKQIHAFIIRN------DHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
+L C + L E IHA +I+ +N+ +A++ S+ YA S+FR
Sbjct: 30 ILEQCKTIRDLNE---IHAHLIKTRLLLKPKVAENLLESAAIL----LPTSMDYAVSIFR 82
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE 293
+ + ++ M+ G+ EA+ +F M N ++PD+FT ++ C+ L +L E
Sbjct: 83 QIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSE 142
Query: 294 GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK 353
G Q H + G S V N L+ Y CG +E + R+F+EM+ R+ +W ++ +GY K
Sbjct: 143 GEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTK 202
Query: 354 FGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
G E + LF +ML ++ DEVTL+ VL+AC R +E G + V+E G++
Sbjct: 203 SGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGE-WINRYVEEKGLKGNPT 261
Query: 414 HYTCMIDILSRAGRLEEAKSFINKMP---------------------------------- 439
T ++D+ ++ G+++ A+ ++M
Sbjct: 262 LITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKAN 321
Query: 440 FPPDAIGWATLLSSCRIHGNVEIGKW 465
P+ I ++LSSC + G +E GKW
Sbjct: 322 IDPNEITMVSILSSCAVLGALETGKW 347
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 133/281 (47%), Gaps = 14/281 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D V+W+ +ISG++ +A+ +++ M K + + + IT ++L + ++
Sbjct: 286 MDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANI-DPNEITMVSILSSCAVLGALET 344
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +H I K V +G+ L+D YAK G + + F ++P KN++ + +I GL
Sbjct: 345 GKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLAS 404
Query: 121 RGLVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAMDQF 175
G +++ F M +K + +++ +++ GL E DLF M R G+
Sbjct: 405 NGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIE 464
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC-KSIKYA-ESVFR 233
+G ++ G +EE Q FI + N + L+ CK K+++ ES+ +
Sbjct: 465 HYGCMVDILGRAGLIEEAFQ---FIKNMPIQPNAVIWRTLL-ASCKVHKNVEIGEESLKQ 520
Query: 234 TMAWKNVVSWTAMLVG--YGQNGCSEEAVKIFCNMQRNGIE 272
+ + S +L+ Y G E+A+K+ M+ GI+
Sbjct: 521 LIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIK 561
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 104/233 (44%), Gaps = 18/233 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +SW +LI G AS+G A++ + LML+ + + +TF +L S VD
Sbjct: 387 MPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNV-EPNDVTFIGVLSACSHAGLVDE 445
Query: 61 GRQIHGHILK-FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITGL 118
GR + + + FG + +VD+ + GLI +A + +P + N V++ T++
Sbjct: 446 GRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASC 505
Query: 119 LRRGLV---EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
V EES + ++ S + + G +A+ + EM+ +G+ +
Sbjct: 506 KVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGI---KK 562
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIR-NDHKDNVFVGSALVDMYCKCKSIKY 227
T G L G+ IH F N H + + +A+ DM + KS Y
Sbjct: 563 TPGCSLIELDGV--------IHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGY 607
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 251/644 (38%), Positives = 391/644 (60%), Gaps = 4/644 (0%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V WN +I G +S S A++ Y M+ G + TF ++ + R G+Q+H
Sbjct: 94 VIWNHMIRGLSSSESPFLALEYYVHMISSGT-EPNEYTFPSIFKSCTKIRGAHEGKQVHA 152
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
H+LK G FV + L++MYA+ G + +A+ FD+ ++ V + +ITG +G ++E
Sbjct: 153 HVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDE 212
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+R LF + +D +SW MI+G Q+G EA+ F EMR + + T SVL+AC
Sbjct: 213 ARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQ 272
Query: 187 L-LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
+L+ G + ++I N+ + + L+DMY KC ++ A ++F + KNVVSW
Sbjct: 273 SGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNV 332
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG--RSLV 303
M+ GY C +EA+ +F M ++ I+P+D T S++ +CANL +L+ G H +
Sbjct: 333 MIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNM 392
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
+ + + + +L+ Y KCG++ + R+F+ MN + +W A++SG+A G + + L
Sbjct: 393 KSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGL 452
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F +M S G PD++T +GVL+AC AGL+ GR YF M+++Y + P HY CMID+
Sbjct: 453 FSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFG 512
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
RAG +EA++ + M PD W +LL +CRIH +E+ + A+ L EL+P NP++YVL
Sbjct: 513 RAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVL 572
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LS+IYA G+W+ V+++R + + ++K PGCS I+ S VH F D P S++IY
Sbjct: 573 LSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKM 632
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
L++++ ++ K G+VPD S VL+D++ K +L+HHSEKLAIAFGL+ PG IR++KN
Sbjct: 633 LDEIDMRLEKAGFVPDTSEVLYDMDEEWKEGVLSHHSEKLAIAFGLISTKPGTTIRIMKN 692
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LRVC +CH+ATK ISKI REI+ RD RFH FK+G CSC D+W
Sbjct: 693 LRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCKDYW 736
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 203/448 (45%), Gaps = 63/448 (14%)
Query: 49 LIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNI 108
L + S+ + + +QIH I+K G + F S L++ A
Sbjct: 32 LTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCA-------------------- 71
Query: 109 VMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE 168
+ G + + LF+ +++ + + W MI GL + A++ + M
Sbjct: 72 ---------VSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISS 122
Query: 169 GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS---- 224
G +++TF S+ +C + EGKQ+HA +++ + N FV ++L++MY +
Sbjct: 123 GTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNA 182
Query: 225 ---------------------------IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSE 257
+ A +F + ++VVSW AM+ GY Q+G E
Sbjct: 183 RLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVE 242
Query: 258 EAVKIFCNMQRNGIEPDDFTLGSVISSCANL-ASLEEGTQFHGRSLVTGLISFITVSNAL 316
EA+ F M+R + P+ T+ SV+S+CA +SL+ G GL S I + N L
Sbjct: 243 EAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGL 302
Query: 317 VTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDE 376
+ Y KCG++E++ LF ++ ++ VSW ++ GY E + LF +M+ + P++
Sbjct: 303 IDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPND 362
Query: 377 VTLIGVLSACSRAGLVEKGRHYFEIMVKEY-GIRPIHDHYTCMIDILSRAGRLEEAKSFI 435
VT + +L AC+ G ++ G+ + K ++ +T +ID+ ++ G L AK
Sbjct: 363 VTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIF 422
Query: 436 NKMPFPPDAIGWATLLSSCRIHGNVEIG 463
+ M A W ++S +HG+ +
Sbjct: 423 DCMNTKSLAT-WNAMISGFAMHGHTDTA 449
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 187/397 (47%), Gaps = 55/397 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VSWN +ISG+A G V +A+ + M + + S + + S + L
Sbjct: 220 IPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQL 279
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G + I G GS + + + L+DMY K G + +A F+++ +KN+V +N MI G
Sbjct: 280 GNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGG--- 336
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+T M +EA+ LFR M + + TF S+
Sbjct: 337 ---------------------YTHM-------SCYKEALGLFRRMMQSNIDPNDVTFLSI 368
Query: 181 LTACGGLLALEEGKQIHAFIIRN--DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
L AC L AL+ GK +HA++ +N K+ V + ++L+DMY KC + A+ +F M K
Sbjct: 369 LPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTK 428
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC--ANLASLEEGTQ 296
++ +W AM+ G+ +G ++ A+ +F M G PDD T V+++C A L SL
Sbjct: 429 SLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSL----- 483
Query: 297 FHGRSLVTGLISFITVSNAL------VTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVS 349
GR + +I VS L + +G+ G +++ L M ++ D W +L+
Sbjct: 484 --GRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLG 541
Query: 350 GYAKFGKANETIDLFEKMLSH--GLKPDEVTLIGVLS 384
+ + I+L E + H L+P+ + +LS
Sbjct: 542 A----CRIHRRIELAESVAKHLFELEPENPSAYVLLS 574
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 103/235 (43%), Gaps = 10/235 (4%)
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTF--YGKCGNIEDSHRLFNEMN 337
+++S+C L +L+ Q H + + TGL + + L+ F G++ + LF +
Sbjct: 33 TLLSNCKTLQTLK---QIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIR 89
Query: 338 VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH 397
+ V W ++ G + ++ + M+S G +P+E T + +C++ +G+
Sbjct: 90 NPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQ 149
Query: 398 YFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIH 457
++K G+ +T +I++ ++ G L A+ +K DA+ + L++
Sbjct: 150 VHAHVLK-LGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSM-RDAVSFTALITGYASK 207
Query: 458 GNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKD 512
G ++ A E E+ + S+ + S YA G+ + MR V +
Sbjct: 208 GFLD---EARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPN 259
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 247/644 (38%), Positives = 382/644 (59%), Gaps = 34/644 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLM-LKDGLGNLSRITFSTMLIMSSSRRCVDLGRQ 63
D V W+ LI+ G +++K+++LM L D L N + T ++L +++ + G+
Sbjct: 379 DIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPN--QYTICSLLSAATNTGNLQYGQS 436
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
IH + K+GF + V V + LV MY ++ G
Sbjct: 437 IHACVWKYGFETDVAVSNALVTMY-------------------------------MKNGC 465
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
V + +L+ M D+D ISW ++GL G+ + +F M EG + +TF S+L +
Sbjct: 466 VHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGS 525
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C L + G+Q+HA II+N DN FV +AL+DMY KC ++ A+ F ++ +++ +W
Sbjct: 526 CSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTW 585
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
T ++ Y Q E+A+ F MQ+ G++P++FTL +S C++LASLE G Q H
Sbjct: 586 TVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFK 645
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
+G +S + V +ALV Y KCG +E++ LF + RD ++W ++ GYA+ G+ N+ +
Sbjct: 646 SGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTA 705
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F ML G+ PD VT G+LSACS GLVE+G+ +F M +++GI P DH CM+DIL
Sbjct: 706 FRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILG 765
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
R G+ +E + FI KM +A+ W T+L + ++H N+ +G+ AA L EL P +SY+L
Sbjct: 766 RVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYIL 825
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LS+I+A++G+WD V ++R M KGV+K+PGCSW++ +VH F + D+S P +I+ +
Sbjct: 826 LSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLK 885
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
L++L+R++ YVP VLH+V +EK + L HSE+LA+ F L+ IR+ KN
Sbjct: 886 LDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKN 945
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LR+C DCH+ K+IS IT +EI+VRD RFH FKNG CSC DFW
Sbjct: 946 LRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSCNDFW 989
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 137/455 (30%), Positives = 223/455 (49%), Gaps = 38/455 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSW LI G + G ND++ ++ M +G+ + T +T L S +DL
Sbjct: 173 MPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMP-NEFTLATGLKACSLCMALDL 231
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H K G +FVGS LVD+YAK G I
Sbjct: 232 GKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEI--------------------------- 264
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
E + ++F GM +++ ++W ++ G Q G + LF M + ++FT +V
Sbjct: 265 ----ELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTV 320
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C L++G+ IH+ II+ ++ N F+G LVDMY KC A VF+T+ ++
Sbjct: 321 LKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDI 380
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V W+A++ Q G SEE++K+F M+ P+ +T+ S++S+ N +L+ G H
Sbjct: 381 VVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHAC 440
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
G + + VSNALVT Y K G + D +L+ M RD +SW A +SG G +
Sbjct: 441 VWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRP 500
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC--M 418
+ +F ML G P+ T I +L +CS V GR ++K + +++ C +
Sbjct: 501 LTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKN---QLDDNNFVCTAL 557
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
ID+ ++ LE+A N++ D W ++++
Sbjct: 558 IDMYAKCMYLEDADVAFNRLSV-RDLFTWTVIITN 591
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/451 (28%), Positives = 225/451 (49%), Gaps = 34/451 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+WN+L++G+A G V +K++ M++ + + T +T+L ++ + +
Sbjct: 274 MPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDV-KCNEFTLTTVLKGCANSKNLKQ 332
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ IH I+K G+ F+G LVDMY+K GL DA
Sbjct: 333 GQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIG---------------------- 370
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+F+ +K D + W+ +IT L Q G E+I LF MRL +Q+T S+
Sbjct: 371 ---------VFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSL 421
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+A L+ G+ IHA + + + +V V +ALV MY K + ++ +M +++
Sbjct: 422 LSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDL 481
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SW A L G G + + IF +M G P+ +T S++ SC+ L + G Q H
Sbjct: 482 ISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAH 541
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ L V AL+ Y KC +ED+ FN ++VRD +WT +++ YA+ + +
Sbjct: 542 IIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKA 601
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++ F +M G+KP+E TL G LS CS +E G+ ++ K + + + ++D
Sbjct: 602 LNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVG-SALVD 660
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
+ ++ G +EEA++ + D I W T++
Sbjct: 661 MYAKCGCMEEAEALFEAL-IRRDTIAWNTII 690
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 197/408 (48%), Gaps = 33/408 (8%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
+S+ML +S+R + + + IHG I+K + LV++YAK Y A
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCR--YSAY------- 165
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
+R + M D+D +SWT +I GL+ G ++I LF+E
Sbjct: 166 ----------------------ARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQE 203
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M+ EG+ ++FT + L AC +AL+ GKQ+HA + ++FVGSALVD+Y KC
Sbjct: 204 MQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGE 263
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
I+ A +F M +N V+W +L GY Q G +K+FC+M ++ ++FTL +V+
Sbjct: 264 IELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKG 323
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
CAN +L++G H + G + LV Y KCG D+ +F + D V W
Sbjct: 324 CANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVW 383
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
+AL++ + G++ E+I LF M P++ T+ +LSA + G ++ G+ V
Sbjct: 384 SALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQS-IHACVW 442
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+YG ++ + + G + + M D I W LS
Sbjct: 443 KYGFETDVAVSNALVTMYMKNGCVHDGTKLYESM-VDRDLISWNAYLS 489
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 163/315 (51%), Gaps = 5/315 (1%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
+ S+L C +L K IH I+++ + + +LV++Y KC+ YA V M
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
++VVSWTA++ G G + +++ +F MQ GI P++FTL + + +C+ +L+ G Q
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H ++ GL+ + V +ALV Y KCG IE + ++F M +++V+W L++GYA+ G
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
+ LF M+ +K +E TL VL C+ + +++G+ +++K G ++
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIK-CGYEG-NEFIG 352
Query: 417 C-MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
C ++D+ S+ G +A + PD + W+ L++ G E L+ L
Sbjct: 353 CGLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALITCLDQQGQSE-ESIKLFHLMRLGD 410
Query: 476 YNPASYVLLSSIYAS 490
P Y + S + A+
Sbjct: 411 TLPNQYTICSLLSAA 425
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 259/648 (39%), Positives = 397/648 (61%), Gaps = 19/648 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN ++SG+ G V++A V+ D + + + I+++ +L V
Sbjct: 121 MPEKDVVSWNAMLSGYVRSGHVDEARDVF-----DRMPHKNSISWNGLLAAY-----VRS 170
Query: 61 GRQIHGHILKFGFGSYVFVG-SPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
GR L + + + L+ Y K ++ DA++ FD++P ++++ +NTMI+G
Sbjct: 171 GRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYA 230
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ G + ++RRLF +D +WT M+ +Q+G+ EA +F EM + + ++
Sbjct: 231 QDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQK----REMSYNV 286
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
++ ++ G+++ N+ + ++ YC+ + A ++F M ++
Sbjct: 287 MIAGYAQYKRMDMGREL----FEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRD 342
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VSW A++ GY QNG EEA+ + M+R+G + T +S+CA++A+LE G Q HG
Sbjct: 343 SVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHG 402
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ + TG V NALV Y KCG I++++ +F + +D VSW +++GYA+ G +
Sbjct: 403 QVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQ 462
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ +FE M++ G+KPDE+T++GVLSACS GL ++G YF M K+YGI P HY CMI
Sbjct: 463 ALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMI 522
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L RAG LEEA++ I MPF PDA W LL + RIHGN+E+G+ AAE + +++P+N
Sbjct: 523 DLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSG 582
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
YVLLS++YA+ G+W VS++R MR+ GV+K PG SW++ ++++H F+ D P +
Sbjct: 583 MYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGDCFHPEKGR 642
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IYA LE+L+ KM EGYV VLHDVE EK ML +HSEKLA+AFG+L +P G PIR
Sbjct: 643 IYAFLEELDLKMKHEGYVSSTKLVLHDVEEEEKKHMLKYHSEKLAVAFGILTMPSGKPIR 702
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V+KNLRVC DCHNA K+ISKI R I+VRD+ R+H F G CSC D+W
Sbjct: 703 VMKNLRVCEDCHNAIKHISKIVGRLIIVRDSHRYHHFSEGICSCRDYW 750
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 200/447 (44%), Gaps = 39/447 (8%)
Query: 26 VKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI--LKFGFGSYVFVGSPL 83
K + +++G +L+ F M + R V I G++ KF +F P
Sbjct: 37 TKAISTHMRNGHCDLALCVFDAMPL----RNSVSYNAMISGYLRNAKFSLARDLFDKMPH 92
Query: 84 VDM---------YAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGM 134
D+ YA+ + DA+ FD +PEK++V +N M++G +R G V+E+R +F M
Sbjct: 93 KDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRM 152
Query: 135 KDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA---LE 191
K+SISW ++ +++G EA LF + + S GG + L
Sbjct: 153 PHKNSISWNGLLAAYVRSGRLEEARRLFE-------SKSDWELISCNCLMGGYVKRNMLG 205
Query: 192 EGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYG 251
+ +Q+ I D + + ++ Y + + A +F ++V +WTAM+ Y
Sbjct: 206 DARQLFDQIPVRD----LISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYV 261
Query: 252 QNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFIT 311
Q+G +EA ++F M + + + +I+ A ++ G + + S+
Sbjct: 262 QDGMLDEARRVFDEMP----QKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSW-- 315
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG 371
N +++ Y + G++ + LF+ M RD VSW A+++GYA+ G E +++ +M G
Sbjct: 316 --NIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDG 373
Query: 372 LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEA 431
+ T LSAC+ +E G+ +V+ G ++ + + G ++EA
Sbjct: 374 ESLNRSTFCCALSACADIAALELGKQVHGQVVRT-GYEKGCLVGNALVGMYCKCGCIDEA 432
Query: 432 KSFINKMPFPPDAIGWATLLSSCRIHG 458
+ D + W T+L+ HG
Sbjct: 433 YDVFQGVQH-KDIVSWNTMLAGYARHG 458
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1005
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 248/643 (38%), Positives = 388/643 (60%), Gaps = 32/643 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW+ +I+ G +A +V+ M G+ ++ T ++++ ++ + G I
Sbjct: 395 DVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIP-NQFTLASLVSAATDLGDLYYGESI 453
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H + K+GF V + LV MY K+G V
Sbjct: 454 HACVCKYGFEYDNTVCNALVTMYMKIGS-------------------------------V 482
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
++ R+F ++D ISW +++G N + +F +M EG + +TF S+L +C
Sbjct: 483 QDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSC 542
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L ++ GKQ+HA I++N N FVG+ALVDMY K + ++ AE++F + +++ +WT
Sbjct: 543 SSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWT 602
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++ GY Q+G E+AVK F MQR G++P++FTL S +S C+ +A+L+ G Q H ++
Sbjct: 603 VIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKA 662
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G + V++ALV Y KCG +ED+ +F+ + RD VSW ++ GY++ G+ + + F
Sbjct: 663 GQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAF 722
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
E ML G PDEVT IGVLSACS GL+E+G+ +F + K YGI P +HY CM+DIL R
Sbjct: 723 EAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGR 782
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG+ E +SFI +M + + W T+L +C++HGN+E G+ AA L EL+P ++Y+LL
Sbjct: 783 AGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILL 842
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S+++A+KG WD V+ +R M +GV+K+PGCSW++ +VH+F + D S P +I+ +L
Sbjct: 843 SNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKL 902
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
+ L++K++ GY P+ VLH+V EK ++L +HSE+LA+AF LL IR+ KNL
Sbjct: 903 QDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNL 962
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R+C DCH+ K IS+IT +E++VRD FH FKNG CSC +FW
Sbjct: 963 RICGDCHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 1005
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 145/491 (29%), Positives = 239/491 (48%), Gaps = 43/491 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VSW LI+G + G + AV ++ M ++G+ + T++T L S C+DL
Sbjct: 189 IPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGV-EANEFTYATALKACS--MCLDL 245
Query: 61 --GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G+Q+H +K G S +FVGS LVD+YAK G + A+R F +P++N
Sbjct: 246 EFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQN----------- 294
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
++SW ++ G Q G + ++LF M + +FT
Sbjct: 295 --------------------AVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLS 334
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
+VL C L G+ +H+ IR + + F+ LVDMY KC A VF +
Sbjct: 335 TVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDP 394
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+VVSW+A++ Q G S EA ++F M+ +G+ P+ FTL S++S+ +L L G H
Sbjct: 395 DVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIH 454
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G TV NALVT Y K G+++D R+F RD +SW AL+SG+ +
Sbjct: 455 ACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCD 514
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
+ +F +ML+ G P+ T I +L +CS V+ G+ +VK + T +
Sbjct: 515 TGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKN-SLDGNDFVGTAL 573
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL--DPY 476
+D+ ++ LE+A++ N++ D W +++ G G+ A + +++ +
Sbjct: 574 VDMYAKNRFLEDAETIFNRL-IKRDLFAWTVIVAGYAQDGQ---GEKAVKCFIQMQREGV 629
Query: 477 NPASYVLLSSI 487
P + L SS+
Sbjct: 630 KPNEFTLASSL 640
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 136/443 (30%), Positives = 221/443 (49%), Gaps = 38/443 (8%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
+S ML +S+ ++ G+ IHG ++K G + + LV++YAK G A + F E+P
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
E+ D +SWT +ITG + G A++LF E
Sbjct: 191 ER-------------------------------DVVSWTALITGFVAEGYGSGAVNLFCE 219
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
MR EG+ ++FT+ + L AC L LE GKQ+HA I+ ++FVGSALVD+Y KC
Sbjct: 220 MRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGE 279
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ AE VF M +N VSW A+L G+ Q G +E+ + +FC M + I FTL +V+
Sbjct: 280 MVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKG 339
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
CAN +L G H ++ G +S LV Y KCG D+ ++F + D VSW
Sbjct: 340 CANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSW 399
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
+A+++ + G++ E ++F++M G+ P++ TL ++SA + G + G + K
Sbjct: 400 SAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCK 459
Query: 405 EYGIRPIHDHYTC--MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
YG +D+ C ++ + + G +++ + + D I W LLS + +
Sbjct: 460 -YGFE--YDNTVCNALVTMYMKIGSVQDG-CRVFEATTNRDLISWNALLSGFHDNETCDT 515
Query: 463 GKWAAESLLELDPYNPASYVLLS 485
G +L + +NP Y +S
Sbjct: 516 GLRIFNQMLA-EGFNPNMYTFIS 537
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 248/641 (38%), Positives = 402/641 (62%), Gaps = 3/641 (0%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN +I GHA ++ +Y M+ GL S TF +L + + G+QIHG +
Sbjct: 32 WNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNS-YTFPFLLKSCAKSKTFTEGQQIHGQV 90
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
LK GF ++V + L+ MY + + DA + FD +++V Y +ITG RG + ++
Sbjct: 91 LKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITGYASRGDIRSAQ 150
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
+LF + KD +SW MI+G + G +EA++LF EM + D+ T+ +VL+AC
Sbjct: 151 KLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSG 210
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
++E G+Q+H+++ + N+ + +AL+D+Y KC ++ A +F+ +++K+V+SW ++
Sbjct: 211 SIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIG 270
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG--RSLVTGL 306
GY +EA+ +F M R+G P+D T+ SV+ +CA+L +++ G H + G+
Sbjct: 271 GYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGV 330
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ ++ +L+ Y KCG+IE +H++FN M + SW A++ G+A G+A+ + DLF +
Sbjct: 331 TNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSR 390
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M G++PD++T +G+LSACS +G+++ GRH F M ++Y + P +HY CMID+L +G
Sbjct: 391 MRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSG 450
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+EA+ IN M PD + W +LL +C++HGNVE+ + A++L++++P NP+SY+LLS+
Sbjct: 451 LFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIEPENPSSYILLSN 510
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IYAS G+W+ V+++R + K ++K PGCS I+ S V F D P + +IY LE+
Sbjct: 511 IYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVVGDKFHPQNREIYGMLEE 570
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
+ + + G+VPD S VL ++E K L HHSEKLAIAFGL+ PG + +VKNLRV
Sbjct: 571 MEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRV 630
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C +CH ATK +SKI +REI+ RD RFH F++G CSC D+W
Sbjct: 631 CRNCHEATKLLSKIYKREIVARDRTRFHHFRDGVCSCNDYW 671
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 177/365 (48%), Gaps = 35/365 (9%)
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
+F +++ + + W TMI G + ++ L+ M GL + +TF +L +C
Sbjct: 20 VFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAKSKT 79
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA---- 245
EG+QIH +++ +++V ++L+ MY + ++ A VF + ++VVS+TA
Sbjct: 80 FTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITG 139
Query: 246 ---------------------------MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
M+ GY + GC +EA+++F M + + PD+ T
Sbjct: 140 YASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTY 199
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
+V+S+CA+ S+E G Q H G S + + NAL+ Y KCG +E + LF ++
Sbjct: 200 VTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSY 259
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR-- 396
+D +SW L+ GY E + LF++ML G P++VT++ VL AC+ G ++ GR
Sbjct: 260 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWI 319
Query: 397 HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRI 456
H + I + G+ T +ID+ ++ G +E A N M W ++ +
Sbjct: 320 HVY-IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM-LHKSLSSWNAMIFGFAM 377
Query: 457 HGNVE 461
HG +
Sbjct: 378 HGRAD 382
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 196/433 (45%), Gaps = 71/433 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VSWN +ISG+A G +A++++ M+K + T+ T+L + ++L
Sbjct: 156 IPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNV-RPDESTYVTVLSACAHSGSIEL 214
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H + GF S + + + L+D+Y+K G + A F L K+++ +NT+I G
Sbjct: 215 GRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGG--- 271
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+T M L +EA+ LF+EM G + T SV
Sbjct: 272 ---------------------YTHM-------NLYKEALLLFQEMLRSGETPNDVTMLSV 303
Query: 181 LTACGGLLALEEGKQIHAFIIR--NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
L AC L A++ G+ IH +I + + + ++L+DMY KC I+ A VF +M K
Sbjct: 304 LPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHK 363
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-F 297
++ SW AM+ G+ +G ++ + +F M++ GIEPDD T ++S+C++ L+ G F
Sbjct: 364 SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIF 423
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
+ + + ++ G G +++ + N M
Sbjct: 424 RSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTME-------------------- 463
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
++PD V +L AC G VE + + ++K P Y
Sbjct: 464 --------------MEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIEPENP--SSYIL 507
Query: 418 MIDILSRAGRLEE 430
+ +I + AGR E+
Sbjct: 508 LSNIYASAGRWED 520
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 124/258 (48%), Gaps = 33/258 (12%)
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ YA SVF T+ N + W M+ G+ + ++ ++ M G+ P+ +T ++ S
Sbjct: 14 LPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKS 73
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
CA + EG Q HG+ L G + V +L++ Y + +ED++++F+ + RD VS+
Sbjct: 74 CAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSY 133
Query: 345 TAL-------------------------------VSGYAKFGKANETIDLFEKMLSHGLK 373
TAL +SGYA+ G E ++LFE+M+ ++
Sbjct: 134 TALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVR 193
Query: 374 PDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKS 433
PDE T + VLSAC+ +G +E GR V ++G +ID+ S+ G +E A
Sbjct: 194 PDESTYVTVLSACAHSGSIELGRQVHS-WVDDHGFDSNLKIVNALIDLYSKCGEVETACG 252
Query: 434 FINKMPFPPDAIGWATLL 451
+ + D I W TL+
Sbjct: 253 LFQGLSY-KDVISWNTLI 269
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 343/514 (66%)
Query: 134 MKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEG 193
M+ D +SW ++I G ++ G E +A+ F++MR + +D++T SVL + + ++
Sbjct: 1 MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNA 60
Query: 194 KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQN 253
+H II+ + V +AL+DMY K + A VF M K+VVSWT+++ GY N
Sbjct: 61 ISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHN 120
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVS 313
G EEA+K+FC M+ +G+ PD + SV+S+CA L ++ G Q H + +GL S ++V
Sbjct: 121 GSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVD 180
Query: 314 NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLK 373
N+LVT Y KCG+I D++R F+ M RD +SWTAL+ GYA+ G+ ++ +++M++ G K
Sbjct: 181 NSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTK 240
Query: 374 PDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKS 433
PD +T IG+L ACS GL+ GR YFE M K YGI+P +HY CMID+L R+G+L EAK
Sbjct: 241 PDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKG 300
Query: 434 FINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGK 493
+N+M PDA+ W LL++CR+H +E+G+ AA++L EL+P N YV+LS++Y++ GK
Sbjct: 301 LLNQMVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGK 360
Query: 494 WDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIK 553
W+ +++RR MR +G+ K+PG SWI+ S+V F ++D + P ++IY++++++ + +
Sbjct: 361 WEDAARIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKE 420
Query: 554 EGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNA 613
GYVPDMS LHD + K L +HSEKLA+AFGLL +P G PIR+ KNLRVC DCH A
Sbjct: 421 AGYVPDMSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGDCHTA 480
Query: 614 TKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KY SK+ R I++RD+ FH F G CSCGD+W
Sbjct: 481 MKYTSKVYARHIILRDSNCFHHFTEGRCSCGDYW 514
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 174/352 (49%), Gaps = 34/352 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M F D VSWN LI G G DA+ + M + + T ++L +S + +
Sbjct: 1 MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDM-KIDEYTLPSVLNSFASMKVMQN 59
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+H I+K GF +Y V + L+DMYAK
Sbjct: 60 AISVHCLIIKTGFEAYKLVNNALIDMYAK------------------------------- 88
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+G ++ + +F M DKD +SWT+++TG NG EAI LF +MR+ G+ DQ SV
Sbjct: 89 QGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVYPDQIAVASV 148
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+AC L ++ G+QIHA ++++ + ++ V ++LV MY KC SI A F M ++V
Sbjct: 149 LSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDV 208
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQFHG 299
+SWTA++VGY QNG + +++ + M G +PD T ++ +C++ L G F
Sbjct: 209 ISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLLGSGRAYFEA 268
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
V G+ ++ G+ G + ++ L N+M V D V W AL++
Sbjct: 269 MDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVVAPDAVVWKALLAA 320
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 266/659 (40%), Positives = 402/659 (61%), Gaps = 16/659 (2%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSWN +++ + G A+K++ M +D ++ +L +S G+Q+
Sbjct: 194 DLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQV 253
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG+ L+ G VFVG+ +VDMYAK G++ +A + F+ + K++V +N M+TG + G
Sbjct: 254 HGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRF 313
Query: 125 EESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+++ LF ++++ + ++W+ +I G Q GL EA+D+FR+MRL G + T S+
Sbjct: 314 DDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSL 373
Query: 181 LTACGGLLALEEGKQIHAFIIR-------NDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
L+ C L GK+ H I+ ND D++ V +AL+DMY KCKS K A ++F
Sbjct: 374 LSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFD 433
Query: 234 TMAWKN--VVSWTAMLVGYGQNGCSEEAVKIFCNMQR--NGIEPDDFTLGSVISSCANLA 289
+ K+ VV+WT ++ G Q+G + EA+++F M + N + P+ FT+ + +CA L
Sbjct: 434 LIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLG 493
Query: 290 SLEEGTQFHGRSLVTGLIS-FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
+L G Q H L S + V+N L+ Y K G+++ + +F+ M+ R+ VSWT+L+
Sbjct: 494 ALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLM 553
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
+GY G+ E + +F +M GL PD VT + VL ACS +G+V++G +YF M K++G+
Sbjct: 554 TGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGV 613
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
P +HY CM+D+LSRAGRL+EA I MP P W LLS+CR++ NVE+G++AA
Sbjct: 614 VPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAAN 673
Query: 469 SLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFS 528
LLEL+ N SY LLS+IYA+ W V+++R M+ G++K PGCSW++ + F
Sbjct: 674 QLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFF 733
Query: 529 ADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFG 588
A DWS P S QIY L L +++ GYVPD LHDV+ EK +L+ HSEKLA+A+G
Sbjct: 734 AGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYG 793
Query: 589 LLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+L PG PIR+ KNLR C DCH+A YIS I + EI+VRD+ RFH FKNG CSC +W
Sbjct: 794 ILTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 852
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 137/501 (27%), Positives = 229/501 (45%), Gaps = 79/501 (15%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN LI G + D +++Y M + G TF +L G +H +
Sbjct: 94 WNQLIRRSVHLGFLEDVLQLYRRMQRLGW-RPDHYTFPFVLKACGEIPSFRCGASVHAVV 152
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
GF VFVG+ LV MY + G +A++ FDE+ E+ +
Sbjct: 153 FASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGV-------------------- 192
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQFTFGSVLTACGGL 187
D +SW +++ MQ G A+ +F M + G+ D + +VL AC +
Sbjct: 193 --------GDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASV 244
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM- 246
A GKQ+H + +R+ ++VFVG+A+VDMY KC ++ A VF M K+VVSW AM
Sbjct: 245 GAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMV 304
Query: 247 ----------------------------------LVGYGQNGCSEEAVKIFCNMQRNGIE 272
+ GY Q G EA+ +F M+ G E
Sbjct: 305 TGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSE 364
Query: 273 PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF--------ITVSNALVTFYGKCG 324
P+ TL S++S CA +L G + H + + +++ + V NAL+ Y KC
Sbjct: 365 PNVVTLVSLLSGCALAGTLLHGKETHCHA-IKWILNLDENDPGDDLMVINALIDMYSKCK 423
Query: 325 NIEDSHRLFNEMNVRDE--VSWTALVSGYAKFGKANETIDLFEKMLS--HGLKPDEVTLI 380
+ + + +F+ + +D V+WT L+ G A+ G+ANE ++LF +ML + + P+ T+
Sbjct: 424 SPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTIS 483
Query: 381 GVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF 440
L AC+R G + GR +++ + C+ID+ S++G ++ A+ + M
Sbjct: 484 CALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNM-H 542
Query: 441 PPDAIGWATLLSSCRIHGNVE 461
+ + W +L++ +HG E
Sbjct: 543 QRNGVSWTSLMTGYGMHGRGE 563
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 192/396 (48%), Gaps = 49/396 (12%)
Query: 142 WTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFII 201
W +I + G + + L+R M+ G D +TF VL ACG + + G +HA +
Sbjct: 94 WNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVF 153
Query: 202 RNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV---VSWTAMLVGYGQNGCSEE 258
+ + NVFVG+ LV MY +C + + A VF M + V VSW +++ Y Q G S
Sbjct: 154 ASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIR 213
Query: 259 AVKIFCNMQRN-GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALV 317
A+K+F M + GI PD +L +V+ +CA++ + G Q HG +L +GL + V NA+V
Sbjct: 214 AMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVV 273
Query: 318 TFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH------- 370
Y KCG +E+++++F M V+D VSW A+V+GY++ G+ ++ + LFEK+
Sbjct: 274 DMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVV 333
Query: 371 ----------------------------GLKPDEVTLIGVLSACSRAGLVEKGR----HY 398
G +P+ VTL+ +LS C+ AG + G+ H
Sbjct: 334 TWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHA 393
Query: 399 FEIMVKEYGIRPIHDHYT--CMIDILSRAGRLEEAKSFINKMPFPPD--AIGWATLLSSC 454
+ ++ P D +ID+ S+ + A++ + +P P D + W L+
Sbjct: 394 IKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIP-PKDRSVVTWTVLIGGN 452
Query: 455 RIHGNVEIGKWAAESLLELDPY-NPASYVLLSSIYA 489
HG +L+ D + P ++ + ++ A
Sbjct: 453 AQHGEANEALELFSQMLQPDNFVMPNAFTISCALMA 488
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 181/396 (45%), Gaps = 75/396 (18%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKD-------------------GLGNLS 41
M D VSWN +++G++ G +DA+ ++ + ++ GLG +
Sbjct: 292 MKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEA 351
Query: 42 RITFSTMLIMSSSRRCVDL---------------GRQIHGHILKFGF-------GSYVFV 79
F M + S V L G++ H H +K+ G + V
Sbjct: 352 LDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMV 411
Query: 80 GSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDS 139
+ L+DMY+K A+ FD +P K D+
Sbjct: 412 INALIDMYSKCKSPKAARAMFDLIPPK-----------------------------DRSV 442
Query: 140 ISWTTMITGLMQNGLEREAIDLFREM-RLEGLAM-DQFTFGSVLTACGGLLALEEGKQIH 197
++WT +I G Q+G EA++LF +M + + M + FT L AC L AL G+QIH
Sbjct: 443 VTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIH 502
Query: 198 AFIIRNDHKDN-VFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCS 256
A+++RN + +FV + L+DMY K + A VF M +N VSWT+++ GYG +G
Sbjct: 503 AYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRG 562
Query: 257 EEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHGRSLVTGLISFITVSNA 315
EEA++IF MQ+ G+ PD T V+ +C++ +++G F+G + G++
Sbjct: 563 EEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYAC 622
Query: 316 LVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSG 350
+V + G ++++ L M ++ + W AL+S
Sbjct: 623 MVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSA 658
>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 259/625 (41%), Positives = 378/625 (60%), Gaps = 37/625 (5%)
Query: 24 DAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPL 83
++ KV N++ D + NL +L + + R GR H I++ G + + L
Sbjct: 30 ESSKVENVVHIDRVSNLH-----YLLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNML 84
Query: 84 VDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWT 143
++MY+K L V+ +R+ F M K +SW
Sbjct: 85 INMYSKCSL-------------------------------VDSARKKFNEMPVKSLVSWN 113
Query: 144 TMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRN 203
T+I L QN +REA+ L +M+ EG ++FT SVL C A+ E Q+HAF I+
Sbjct: 114 TVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKA 173
Query: 204 DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIF 263
N FVG+AL+ +Y KC SIK A +F +M KN V+W++M+ GY QNG EEA+ IF
Sbjct: 174 AIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIF 233
Query: 264 CNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKC 323
N Q G + D F + S +S+CA LA+L EG Q H S +G S I VS++L+ Y KC
Sbjct: 234 RNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKC 293
Query: 324 GNIEDSHRLFN-EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGV 382
G I +++ +F + VR V W A++SG+A+ +A E + LFEKM G PD+VT + V
Sbjct: 294 GCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCV 353
Query: 383 LSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPP 442
L+ACS GL E+G+ YF++MV+++ + P HY+CMIDIL RAG + +A I +MPF
Sbjct: 354 LNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNA 413
Query: 443 DAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRR 502
+ W +LL+SC+I+GN+E + AA+ L E++P N +++LL++IYA+ KWD V++ R+
Sbjct: 414 TSSMWGSLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIYAANKKWDEVARARK 473
Query: 503 TMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSS 562
+RE VRK+ G SWI+ K+++H F+ + + P D IYA+L+ L ++ K Y D S+
Sbjct: 474 LLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLVVELKKLNYKVDTSN 533
Query: 563 VLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQ 622
LHDVE + K +L HHSEKLAI FGL+ +P +PIR++KNLR+C DCH K +SK T
Sbjct: 534 DLHDVEENRKQMLLRHHSEKLAITFGLMCLPRDIPIRIIKNLRICGDCHTFMKLVSKSTS 593
Query: 623 REILVRDAVRFHLFKNGECSCGDFW 647
REI+VRD RFH FK+G CSCG+FW
Sbjct: 594 REIIVRDTNRFHHFKDGFCSCGEFW 618
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 174/358 (48%), Gaps = 35/358 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP VSWN +I + +A+K+ M ++G + T S++L + + +
Sbjct: 104 MPVKSLVSWNTVIGALTQNAEDREALKLLIQMQREGTP-FNEFTISSVLCNCAFKCAILE 162
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
Q+H +K S FVG+ L+ +YAK I DA + F+ +PEKN V +++M+ G ++
Sbjct: 163 CMQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQ 222
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G E EA+ +FR +L G D F S
Sbjct: 223 NGFHE-------------------------------EALLIFRNAQLMGFDQDPFMISSA 251
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR-TMAWKN 239
++AC GL L EGKQ+HA ++ N++V S+L+DMY KC I+ A VF+ + ++
Sbjct: 252 VSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRS 311
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+V W AM+ G+ ++ + EA+ +F MQ+ G PDD T V+++C+++ EEG ++
Sbjct: 312 IVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFD 371
Query: 300 RSLVT-GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFG 355
+ L + + ++ G+ G + ++ L M S W +L++ +G
Sbjct: 372 LMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLLASCKIYG 429
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 118/281 (41%), Gaps = 48/281 (17%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+W+ +++G+ +G +A+ ++ G +I S+ C L
Sbjct: 205 MPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQ------DPFMISSAVSACAGL 258
Query: 61 -----GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPE-KNIVMYNTM 114
G+Q+H K GFGS ++V S L+DMYAK G I +A F + E ++IV++N M
Sbjct: 259 ATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAM 318
Query: 115 ITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
I+G R E+ LF M+ + G D
Sbjct: 319 ISGFARHARAPEAMILFEKMQQR-------------------------------GFFPDD 347
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESVFR 233
T+ VL AC + EEG++ ++R + +V S ++D+ + + A +
Sbjct: 348 VTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIE 407
Query: 234 TMAWKNVVS-WTAMLVG---YGQNGCSEEAVKIFCNMQRNG 270
M + S W ++L YG +E A K M+ N
Sbjct: 408 RMPFNATSSMWGSLLASCKIYGNIEFAEIAAKYLFEMEPNN 448
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 255/700 (36%), Positives = 400/700 (57%), Gaps = 60/700 (8%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P + +W +++ HA+ G +DA+ ++ ML +G+ R+T +T+L + C
Sbjct: 315 PHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIP-DRVTVTTVLNLPG---CT--V 368
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL--- 118
+H +KFG ++VFV + L+D Y K GL+ A+R F E+ +K+ V YN M+ G
Sbjct: 369 PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKE 428
Query: 119 ------------LRRG---------------------------------------LVEES 127
+RR +++
Sbjct: 429 GLHTQALQLFAAMRRAGYSRHPLHLLQYSHSRSRSTSVLNVFVNNSLLDFYSKCDCLDDM 488
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
RRLF M ++D++S+ +I N + LFREM+ G + ++L+ G L
Sbjct: 489 RRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSL 548
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
+ GKQIHA ++ +G+AL+DMY KC + A+S F + K+ +SWTA++
Sbjct: 549 PDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALI 608
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
GY QNG EEA+++F +M+R G+ PD T S+I + ++LA + G Q H + +G
Sbjct: 609 TGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYK 668
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
S + + LV Y KCG ++++ R F+EM R+ +SW A++S YA +G+A I +FE M
Sbjct: 669 SSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGM 728
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
L G PD VT + VL+ACS GL ++ YF +M +Y I P +HY C+ID L R G
Sbjct: 729 LHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGC 788
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSI 487
+ + + +MPF D I W ++L SCRIHGN E+ + AA+ L ++P + YV+LS+I
Sbjct: 789 FSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNI 848
Query: 488 YASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKL 547
YA G+W+ + +++ MR++GVRK+ G SW++ K +++ F+++D +SP D+I EL++L
Sbjct: 849 YARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRL 908
Query: 548 NRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVC 607
++M K+GY PD++ LH V+ K++ L +HSE+LAIAF L+ P G PIR++KNL C
Sbjct: 909 YKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTAC 968
Query: 608 SDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
DCH K ISKI R+I+VRD+ RFH FK+G CSCGD+W
Sbjct: 969 LDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 1008
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 202/416 (48%), Gaps = 46/416 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VS+N++I+ +A + ++++ M K G + + ++TML ++ S V +
Sbjct: 495 MPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGF-DRQVLPYATMLSVAGSLPDVHI 553
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIH ++ G S +G+ L+DMY+K G++ AK F EK+ + + +ITG ++
Sbjct: 554 GKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQ 613
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G E EA+ LF +MR GL D+ TF S+
Sbjct: 614 NGQHE-------------------------------EALQLFSDMRRAGLRPDRATFSSI 642
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ A L + G+Q+H+++IR+ +K +VF GS LVDMY KC + A F M +N
Sbjct: 643 IKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNS 702
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF--- 297
+SW A++ Y G ++ A+K+F M G PD T SV+++C++ +E ++
Sbjct: 703 ISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHL 762
Query: 298 --HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKF 354
H S+ + V + L G+ G ++ EM + D + WT+++
Sbjct: 763 MKHQYSISPWKEHYACVIDTL----GRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIH 818
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSAC-SRAGLVEKGRHYFEIMVKEYGIR 409
G +K+ G++P + T +LS +RAG E +IM ++ G+R
Sbjct: 819 GNQELARVAADKLF--GMEPTDATPYVILSNIYARAGQWEDAACVKKIM-RDRGVR 871
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 175/373 (46%), Gaps = 27/373 (7%)
Query: 91 GLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLM 150
G ++ A+ FD++P KNI N +++ G + ++ LF +++ +WT M+
Sbjct: 271 GHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHA 330
Query: 151 QNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVF 210
G +A+ LFR M EG+ D+ T +VL G + +H F I+ +VF
Sbjct: 331 AAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV-----PSLHPFAIKFGLDTHVF 385
Query: 211 VGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
V + L+D YCK + A VF M K+ V++ AM++G + G +A+++F M+R G
Sbjct: 386 VCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAG 445
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQF-HGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
L Q+ H RS T +++ + V+N+L+ FY KC ++D
Sbjct: 446 YSRHPLHL----------------LQYSHSRSRSTSVLN-VFVNNSLLDFYSKCDCLDDM 488
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
RLF+EM RD VS+ +++ YA A + LF +M G + +LS
Sbjct: 489 RRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSL 548
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKS-FINKMPFPPDAIGWA 448
V G+ +V G+ +ID+ S+ G L+ AKS F N+ AI W
Sbjct: 549 PDVHIGKQIHAQLVL-LGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS--EKSAISWT 605
Query: 449 TLLSSCRIHGNVE 461
L++ +G E
Sbjct: 606 ALITGYVQNGQHE 618
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 259/644 (40%), Positives = 387/644 (60%), Gaps = 9/644 (1%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
++W +I + SHG ++ + ML G + F ++L + + + G +HG
Sbjct: 72 LAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNV-FPSVLKSCTLMKDLRFGESVHG 130
Query: 67 HILKFGFGSYVFVGSPLVDMYAK---LGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
I++ G G ++ + L++MY+K L + K+ FDE ++ + L
Sbjct: 131 CIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYL---- 186
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
R++F M +D +SW T+I+G QNG+ +A+ + REM L D FT SVL
Sbjct: 187 -GSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPI 245
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
+ L +GK+IH + IRN + +VF+GS+L+DMY KC + + VF + + +SW
Sbjct: 246 FAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISW 305
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
+++ G QNG +E +K F M I+P+ + S++ +CA+L +L G Q HG +
Sbjct: 306 NSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIR 365
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
+ + +++ALV Y KCGNI + +F++M + D VSWTA++ GYA G A + I L
Sbjct: 366 SRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISL 425
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F++M G+KP+ V + VL+ACS AGLV++ YF M ++Y I P +HY + D+L
Sbjct: 426 FKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLG 485
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
R GRLEEA FI+ M P W+TLL++CR+H N+E+ + ++ L +DP N +YVL
Sbjct: 486 RVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVL 545
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LS+IY++ G+W +LR MR+KG++K P CSWI+ K++VH F A D S PY D+I
Sbjct: 546 LSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEA 605
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
L+ L +M +EGYV D + VLHDVE +K +L HSE+LAI FG++ P G IRV KN
Sbjct: 606 LKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKN 665
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LRVC DCH ATK+ISKI REI+VRD RFH FK+G+CSCGDFW
Sbjct: 666 LRVCVDCHTATKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 709
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 203/377 (53%), Gaps = 54/377 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNL----SRITFSTMLIMSSSRR 56
MP D VSWN +ISG+A +G DA LM+ +GN T S++L + +
Sbjct: 196 MPKRDIVSWNTVISGNAQNGMHEDA-----LMMVREMGNADLRPDSFTLSSVLPIFAEYV 250
Query: 57 CVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMIT 116
+ G++IHG+ ++ G+ + VF+GS L+DMYAK + D+ R F LP+ + + +N++I
Sbjct: 251 NLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIA 310
Query: 117 GLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
G ++ G+ +E G+K F++M + + + +
Sbjct: 311 GCVQNGMFDE------GLK-------------------------FFQQMLIAKIKPNHVS 339
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
F S++ AC L L GKQ+H +IIR+ NVF+ SALVDMY KC +I+ A +F M
Sbjct: 340 FSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKME 399
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
++VSWTAM++GY +G + +A+ +F M+ G++P+ +V+++C++ ++E +
Sbjct: 400 LYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWK 459
Query: 297 F-----HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSG 350
+ ++ GL + V++ L G+ G +E+++ ++M++ S W+ L++
Sbjct: 460 YFNSMTQDYRIIPGLEHYAAVADLL----GRVGRLEEAYEFISDMHIEPTGSVWSTLLAA 515
Query: 351 YAKFGKANETIDLFEKM 367
+ ++ I+L EK+
Sbjct: 516 ----CRVHKNIELAEKV 528
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 201/454 (44%), Gaps = 70/454 (15%)
Query: 39 NLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKR 98
N ++ T+L SS + +Q+H IL+ S + S ++ +Y+ L L++D+
Sbjct: 2 NTTQNLCKTLLQNPSSVKSKSQAKQLHAQILRTSLPSPSLL-STILSIYSNLNLLHDSLL 60
Query: 99 GFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREA 158
F+ LP +++W ++I +GL +
Sbjct: 61 IFNSLPSP------------------------------PTTLAWKSIIRCYTSHGLFLHS 90
Query: 159 IDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDM 218
+ F +M G D F SVL +C + L G+ +H IIR +++ +AL++M
Sbjct: 91 LSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNM 150
Query: 219 YCKCKSIKYAES-----------------------------VFRTMAWKNVVSWTAMLVG 249
Y K S++ + VF M +++VSW ++ G
Sbjct: 151 YSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISG 210
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
QNG E+A+ + M + PD FTL SV+ A +L +G + HG ++ G +
Sbjct: 211 NAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDAD 270
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
+ + ++L+ Y KC ++DS R+F + D +SW ++++G + G +E + F++ML
Sbjct: 271 VFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLI 330
Query: 370 HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH----YTCMIDILSRA 425
+KP+ V+ ++ AC+ + G+ + Y IR D + ++D+ ++
Sbjct: 331 AKIKPNHVSFSSIMPACAHLTTLHLGKQ-----LHGYIIRSRFDGNVFIASALVDMYAKC 385
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
G + A+ +KM D + W ++ +HG+
Sbjct: 386 GNIRTARWIFDKMEL-YDMVSWTAMIMGYALHGH 418
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 139/283 (49%), Gaps = 18/283 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P HDG+SWN +I+G +G ++ +K + ML + + ++FS+++ + + L
Sbjct: 297 LPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKI-KPNHVSFSSIMPACAHLTTLHL 355
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+HG+I++ F VF+ S LVDMYAK G I A+ FD++ ++V + MI G
Sbjct: 356 GKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYAL 415
Query: 121 RGLVEESRRLFRGMK----DKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
G ++ LF+ M+ + +++ ++T GL EA F M + +
Sbjct: 416 HGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLE 475
Query: 177 -FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC---KSIKYAESVF 232
+ +V G + LEE + I + H + GS + C K+I+ AE V
Sbjct: 476 HYAAVADLLGRVGRLEEAYE----FISDMHIEP--TGSVWSTLLAACRVHKNIELAEKVS 529
Query: 233 R---TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE 272
+ T+ +N+ ++ + Y G ++A K+ M+ G++
Sbjct: 530 KKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMK 572
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 260/652 (39%), Positives = 396/652 (60%), Gaps = 40/652 (6%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSR---RCV 58
P D +SWN +IS +A + +A+ + +L+DGL + T +++L S+
Sbjct: 956 PELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGL-KPDQFTLASVLRACSTGDEGEYF 1014
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
LG Q+H + +K G + FV + L+D+Y+K
Sbjct: 1015 TLGSQVHVYAIKCGIINDSFVSTALIDLYSK----------------------------- 1045
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
G ++E+ L G D D SW ++ G +++ R+A++ F M G+ +D+ T
Sbjct: 1046 --GGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLA 1103
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
+ + A G L+ L++GKQI A+ I+ ++++V S ++DMY KC + A +F ++
Sbjct: 1104 TAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRP 1163
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+ V+WT M+ GY +NG + A+ ++ M+ +G++PD++T ++I + + L +LE+G Q H
Sbjct: 1164 DEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIH 1223
Query: 299 GR--SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
L L F+ S LV Y KCG+++D++R+F +M+VR V W A++ G A+ G
Sbjct: 1224 ANVVKLDYSLDHFVGTS--LVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGH 1281
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
+E ++LF M S+G++PD+VT IGVLSACS +GL + YF+ M K YGI P +HY+
Sbjct: 1282 VDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYS 1341
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY 476
C++D L RAGR++EA++ I MPF A + LL +CR G+ E K A+ LL LDP
Sbjct: 1342 CLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPS 1401
Query: 477 NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPY 536
+ ++YVLLS+IYA+ +WD V+ R M+ K V+KDPG SWI K++VH+F DD S P
Sbjct: 1402 DSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQ 1461
Query: 537 SDQIYAELEKLNRKMIKEG-YVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
+ IY ++E L +++ +EG YVPD L DVE EK + L +HSEKLAIAFGL+ PP
Sbjct: 1462 ASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPS 1521
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
IRV+KNLRVC DCH+A K ISK+TQREI++RDA RFH F+NG CSCGD+W
Sbjct: 1522 ATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/543 (25%), Positives = 254/543 (46%), Gaps = 65/543 (11%)
Query: 5 DGVSWNLLISGHA-----SHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
D V+WN +++ +A S+ +V + +++ L+ + G +++R+T + +L + V
Sbjct: 676 DLVTWNSILAAYAQFADSSYENVLEGFRLFGLLREFGF-SITRLTLAPLLKLCLLSGFVQ 734
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+ +HG+ +K GF +FV LV++Y K GL+ A+ FD++PE++ V++N M+ +
Sbjct: 735 VSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYV 794
Query: 120 RRGLVEESRRLFRG---------------------------------------MK----D 136
+E+ R F MK D
Sbjct: 795 ENSFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFD 854
Query: 137 KDS--ISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGK 194
+ S +W +T + G AID F+ + + D T +L+A G L+ G+
Sbjct: 855 QGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGE 914
Query: 195 QIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNG 254
QIHA +I++ V V ++L++MY K + AE F +++SW M+ Y QN
Sbjct: 915 QIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNN 974
Query: 255 CSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE---GTQFHGRSLVTGLISFIT 311
EA+ F ++ R+G++PD FTL SV+ +C+ E G+Q H ++ G+I+
Sbjct: 975 LEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSF 1034
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG 371
VS AL+ Y K G ++++ L + D SW A++ GY K K+ + ++ F M G
Sbjct: 1035 VSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMG 1094
Query: 372 LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH----YTCMIDILSRAGR 427
+ DE+TL + A +++G+ ++ Y I+ ++ + ++D+ + G
Sbjct: 1095 IPIDEITLATAIKASGCLINLKQGKQ-----IQAYAIKLGFNNDLWVSSGVLDMYIKCGD 1149
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSI 487
+ A ++ PD + W T++S +G+ E + L+ + P Y + I
Sbjct: 1150 MPNALELFGEIS-RPDEVAWTTMISGYIENGD-EDHALSVYHLMRVSGVQPDEYTFATLI 1207
Query: 488 YAS 490
AS
Sbjct: 1208 KAS 1210
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 184/432 (42%), Gaps = 58/432 (13%)
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
LG++ H I+ G ++ + L+ MY+K G + A++ FD+ ++++V +N+++
Sbjct: 629 LGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYA 688
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ DS S+ ++ G GL RE G ++ + T
Sbjct: 689 QFA---------------DS-SYENVLEGFRLFGLLREF----------GFSITRLTLAP 722
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L C ++ + +H + ++ + ++FV ALV++YCK + A +F M ++
Sbjct: 723 LLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERD 782
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC-ANLASLEEGTQFH 298
V W ML Y +N +EA++ F R+G PD L VI +++++ +
Sbjct: 783 AVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQ 842
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
++ + F SN +W ++ + G+
Sbjct: 843 VKAYAMKMFPFDQGSNIF--------------------------AWNKKLTEFLHAGQIV 876
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
ID F+ +L + D VTL+ +LSA A ++ G +++K P+ +
Sbjct: 877 AAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKS-SFAPVVPVSNSL 935
Query: 419 IDILSRAGRLEEA-KSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
+++ S+AG + A K+FIN D I W T++SS N+E+ L D
Sbjct: 936 MNMYSKAGVVYAAEKTFINSPEL--DLISWNTMISS-YAQNNLEMEAICTFRDLLRDGLK 992
Query: 478 PASYVLLSSIYA 489
P + L S + A
Sbjct: 993 PDQFTLASVLRA 1004
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 7/225 (3%)
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
L+ GK+ HA I+ + + ++ + L+ MY KC S+ A VF + +++V+W ++L
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686
Query: 250 YGQNGCSE-----EAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
Y Q S E ++F ++ G TL ++ C ++ HG ++
Sbjct: 687 YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKI 746
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G + VS ALV Y K G + + LF++M RD V W ++ Y + +E + F
Sbjct: 747 GFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFF 806
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
G PD L V+ + + RH + VK Y ++
Sbjct: 807 SAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQ--VKAYAMK 849
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 7/175 (4%)
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
S +A L+ G + H R + +G + ++N L+T Y KCG++ + ++F++ + RD V+
Sbjct: 620 SAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVT 679
Query: 344 WTALVSGYAKFGKAN-----ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
W ++++ YA+F ++ E LF + G +TL +L C +G V+
Sbjct: 680 WNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETV 739
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
VK G +++I + G + +A+ +KMP DA+ W +L +
Sbjct: 740 HGYAVK-IGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKA 792
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 265/651 (40%), Positives = 376/651 (57%), Gaps = 38/651 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN ISG +HG + A+++ M GL + T S++L + +L
Sbjct: 266 MPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVP-NVFTLSSVLKACAGAGAFNL 324
Query: 61 GRQIHGHILKF--GFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
GRQIHG ++K F +V VG LVDMYAK G + DA
Sbjct: 325 GRQIHGFMVKAVADFDEFVAVG--LVDMYAKHGFLDDA---------------------- 360
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD--QFT 176
R++F M +D I W +I+G +G E + LF MR EGL +D + T
Sbjct: 361 ---------RKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTT 411
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
SVL + A+ +Q+HA + + V + L+D Y KC + YA VF+
Sbjct: 412 LASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESR 471
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
+++S T M+ Q E+A+K+F M R G+EPD F L S++++C +L++ E+G Q
Sbjct: 472 SDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQ 531
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H + S + NALV Y KCG+IED+ F+ + R VSW+A++ G A+ G
Sbjct: 532 VHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGH 591
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
+DLF +ML G+ P+ +TL VLSAC+ AGLV+ + YFE M + +GI +HY
Sbjct: 592 GKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYA 651
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY 476
CMIDIL RAG+LE+A +N MPF +A W LL + R+H + E+G+ AAE L L+P
Sbjct: 652 CMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPE 711
Query: 477 NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPY 536
++VLL++ YAS G WD ++++R+ M++ V+K+P SW++ K +VH F D S P
Sbjct: 712 KSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPM 771
Query: 537 SDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGL 596
+ IY +L +L M K GYVP++ LHDV+ SEK +L+HHSE+LA+AF L+ P G
Sbjct: 772 TRDIYGKLAELGDLMNKAGYVPNVEVDLHDVDRSEKELLLSHHSERLAVAFALISTPSGA 831
Query: 597 PIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
PIRV KNLR+C DCH A KYISKI REI++RD RFH F NG CSCGD+W
Sbjct: 832 PIRVKKNLRICRDCHVAFKYISKIVSREIIIRDINRFHHFTNGTCSCGDYW 882
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 140/509 (27%), Positives = 232/509 (45%), Gaps = 74/509 (14%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P H VSW+ L++ ++++G DA+ + M G+ + +L + R G
Sbjct: 66 PCH--VSWSSLVTAYSNNGMPRDALLAFRAMRGRGV-PCNEFALPVVLKCAPDVR---FG 119
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
Q+H + VFV + LV +Y G++ +A+R FDE
Sbjct: 120 AQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDE------------------- 160
Query: 122 GLVEESRRLFRGMK-DKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ G+ +++++SW TMI+ ++N +AI +FREM G ++F F V
Sbjct: 161 ---------YVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCV 211
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ AC G LE G+Q+H ++R ++ +VF +ALVDMY K I+ A +VF M +V
Sbjct: 212 VNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADV 271
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW A + G +G A+++ M+ +G+ P+ FTL SV+ +CA + G Q HG
Sbjct: 272 VSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGF 331
Query: 301 SL--VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
+ V F+ V LV Y K G ++D+ ++F+ M RD + W AL+SG + G+
Sbjct: 332 MVKAVADFDEFVAV--GLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHG 389
Query: 359 ETIDLFEKMLSHGLKPD--EVTLIGVLSACSRAGLVEKGRHYFEIMVK------------ 404
E + LF +M GL D TL VL + + + + R + K
Sbjct: 390 EVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVING 449
Query: 405 -----------EYGIRPIHDHY-------TCMIDILSRAGRLEEAKSFINKM---PFPPD 443
+Y I+ + T M+ LS+ E+A +M PD
Sbjct: 450 LIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPD 509
Query: 444 AIGWATLLSSCRIHGNVEIGKWAAESLLE 472
+ ++LL++C E GK L++
Sbjct: 510 SFVLSSLLNACTSLSAYEQGKQVHAHLIK 538
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/397 (30%), Positives = 187/397 (47%), Gaps = 27/397 (6%)
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
+ +FG +F G+ L K GL+ GF N ++T R L +
Sbjct: 11 LARFGTSRSLFAGAHLHSHLLKSGLL----AGFS----------NHLLTLYSRCRLPSAA 56
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
R +F + D +SW++++T NG+ R+A+ FR MR G+ ++F VL
Sbjct: 57 RAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPD- 115
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW----KNVVSW 243
+ G Q+HA + +VFV +ALV +Y + A +F +N VSW
Sbjct: 116 --VRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSW 173
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
M+ Y +N S +A+ +F M +G P++F V+++C LE G Q HG +
Sbjct: 174 NTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVR 233
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
TG + +NALV Y K G+IE + +F +M D VSW A +SG G + ++L
Sbjct: 234 TGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALEL 293
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC--MIDI 421
+M S GL P+ TL VL AC+ AG GR MVK D + ++D+
Sbjct: 294 LLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVA---DFDEFVAVGLVDM 350
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
++ G L++A+ + MP D I W L+S C G
Sbjct: 351 YAKHGFLDDARKVFDFMP-RRDLILWNALISGCSHDG 386
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 13/182 (7%)
Query: 277 TLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
T+GS ++ SL G H L +GL++ SN L+T Y +C + +F+E+
Sbjct: 6 TIGSALARFGTSRSLFAGAHLHSHLLKSGLLA--GFSNHLLTLYSRCRLPSAARAVFDEI 63
Query: 337 NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR 396
VSW++LV+ Y+ G + + F M G+ +E L VL R
Sbjct: 64 PDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDV------R 117
Query: 397 HYFEIMVKEYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINK---MPFPPDAIGWATLL 451
++ R +HD + ++ + G ++EA+ ++ + +A+ W T++
Sbjct: 118 FGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMI 177
Query: 452 SS 453
S+
Sbjct: 178 SA 179
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 255/650 (39%), Positives = 400/650 (61%), Gaps = 40/650 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D V+WN++I G+A+ G + ++++ M G+ LSR F T L + S +R ++
Sbjct: 266 MVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGV-KLSRTVFCTALKLCSQQRELNF 324
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+Q+H ++K G+ + + L+ Y+K
Sbjct: 325 TKQLHCGVVKNGYEFAQDIRTALMVTYSKCSS---------------------------- 356
Query: 121 RGLVEESRRLFRGMKDK--DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
V+E+ +LF M D + ++WT MI G +QN ++A+DLF +M EG+ + FT+
Sbjct: 357 ---VDEAFKLF-SMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYS 412
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
+VL L Q+HA II+ ++ V +AL+D Y K ++ + VF ++ K
Sbjct: 413 TVLAGKPSSLL----SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAK 468
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN-LASLEEGTQF 297
++V+W+AML G Q SE+A+++F + + G++P+++T SVI++C++ A++E G Q
Sbjct: 469 DIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQI 528
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H ++ +G + + VS+AL+T Y K GNIE + ++F RD VSW ++++GY + G A
Sbjct: 529 HATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDA 588
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
+ +++F+ M + GL D+VT IGVL+AC+ AGLVE+G YF IM+K+Y I +HY+C
Sbjct: 589 KKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSC 648
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
M+D+ SRAG ++A IN MPFP W TLL++CR+H N+E+GK AAE L+ L P +
Sbjct: 649 MVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPND 708
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
YVLLS+I+A G W+ + +R+ M E+ V+K+ GCSWI+ K+R+ F A D S P+S
Sbjct: 709 AVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFS 768
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
D +YA+LE+L+ K+ GY PD + V HDVE K +L+ HSE+LAIA+GL+ +PPG P
Sbjct: 769 DLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAP 828
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
I++ KNLR+C DCHN + IS I +R ++VRD+ RFH FK G CSCG +W
Sbjct: 829 IQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/463 (28%), Positives = 231/463 (49%), Gaps = 40/463 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + VSW L+SG+A +G ++ + + N M +G+ N + TF+T+L + ++
Sbjct: 165 MGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGV-NPNGFTFATVLGALADESIIEG 223
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+H I+K GF FV + L+ MY K ++ DA+ FD
Sbjct: 224 GVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFD------------------- 264
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
M +DS++W MI G G E +F MRL G+ + + F +
Sbjct: 265 ------------SMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTA 312
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM-AWKN 239
L C L KQ+H +++N ++ + +AL+ Y KC S+ A +F A N
Sbjct: 313 LKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHN 372
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VV+WTAM+ G+ QN +++AV +FC M R G+ P+ FT +V++ +SL +Q H
Sbjct: 373 VVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLA--GKPSSLL--SQLHA 428
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ + +V+ AL+ Y K GN+ +S R+F + +D V+W+A+++G A+ + +
Sbjct: 429 QIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEK 488
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSAC-SRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
+++F +++ G+KP+E T V++AC S A VE G+ VK G + +
Sbjct: 489 AMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKS-GKSNALCVSSAL 547
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+ + S+ G +E A+ + D + W ++++ HG+ +
Sbjct: 548 LTMYSKKGNIESAEKVFTRQE-ERDIVSWNSMITGYGQHGDAK 589
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 132/513 (25%), Positives = 230/513 (44%), Gaps = 47/513 (9%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P D +N L+ + + +A+ ++ + GLG + +T S L + +G
Sbjct: 65 PLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLG-VDGLTLSCALKVCGVLFDQVVG 123
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
RQ+H LK GF V VG+ LVDMY K D + FDE+ KN+V + ++++G R
Sbjct: 124 RQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYAR- 182
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
NGL E I L +M++EG+ + FTF +VL
Sbjct: 183 ------------------------------NGLNDEVIHLINQMQMEGVNPNGFTFATVL 212
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
A +E G Q+HA I++N + FV +AL+ MY K + + AE+VF +M ++ V
Sbjct: 213 GALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSV 272
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
+W M+ GY G E ++F M+ G++ + + C+ L Q H
Sbjct: 273 TWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGV 332
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN-VRDEVSWTALVSGYAKFGKANET 360
+ G + AL+ Y KC +++++ +LF+ + + V+WTA++ G+ + +
Sbjct: 333 VKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKA 392
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+DLF +M G++P+ T VL+ + L + + +I+ Y P T ++D
Sbjct: 393 VDLFCQMSREGVRPNHFTYSTVLAGKPSSLL---SQLHAQIIKAYYEKVP--SVATALLD 447
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL--DPYNP 478
+ G + E+ +P D + W+ +L+ + A E ++L + P
Sbjct: 448 AYVKTGNVVESARVFYSIP-AKDIVAWSAMLTGL---AQTRDSEKAMEVFIQLVKEGVKP 503
Query: 479 ASYVLLSSIYA---SKGKWDHVSQLRRTMREKG 508
Y S I A S +H Q+ T + G
Sbjct: 504 NEYTFSSVINACSSSAATVEHGKQIHATAVKSG 536
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 158/325 (48%), Gaps = 1/325 (0%)
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+ +LF KD + ++ +N +REA+ LF+++ GL +D T L CG
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L G+Q+H +++ ++V VG++LVDMY K + + +F M KNVVSWT++
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
L GY +NG ++E + + MQ G+ P+ FT +V+ + A+ + +E G Q H + G
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
V NAL+ Y K + D+ +F+ M VRD V+W ++ GYA G E +F +
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHR 296
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M G+K L CS+ + + +VK G D T ++ S+
Sbjct: 297 MRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKN-GYEFAQDIRTALMVTYSKCS 355
Query: 427 RLEEAKSFINKMPFPPDAIGWATLL 451
++EA + + + W ++
Sbjct: 356 SVDEAFKLFSMADAAHNVVTWTAMI 380
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 94/179 (52%)
Query: 226 KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
+YA +F K++ + +L + +N EA+ +F ++ +G+ D TL + C
Sbjct: 55 RYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVC 114
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
L G Q H +SL +G + ++V +LV Y K + ED +F+EM +++ VSWT
Sbjct: 115 GVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWT 174
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
+L+SGYA+ G +E I L +M G+ P+ T VL A + ++E G ++VK
Sbjct: 175 SLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVK 233
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 260/652 (39%), Positives = 396/652 (60%), Gaps = 40/652 (6%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSR---RCV 58
P D +SWN +IS +A + +A+ + +L+DGL + T +++L S+
Sbjct: 956 PELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGL-KPDQFTLASVLRACSTGDEGEYF 1014
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
LG Q+H + +K G + FV + L+D+Y+K
Sbjct: 1015 TLGSQVHVYAIKCGIINDSFVSTALIDLYSK----------------------------- 1045
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
G ++E+ L G D D SW ++ G +++ R+A++ F M G+ +D+ T
Sbjct: 1046 --GGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLA 1103
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
+ + A G L+ L++GKQI A+ I+ ++++V S ++DMY KC + A +F ++
Sbjct: 1104 TAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRP 1163
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+ V+WT M+ GY +NG + A+ ++ M+ +G++PD++T ++I + + L +LE+G Q H
Sbjct: 1164 DEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIH 1223
Query: 299 GR--SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
L L F+ S LV Y KCG+++D++R+F +M+VR V W A++ G A+ G
Sbjct: 1224 ANVVKLDYSLDHFVGTS--LVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGH 1281
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
+E ++LF M S+G++PD+VT IGVLSACS +GL + YF+ M K YGI P +HY+
Sbjct: 1282 VDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYS 1341
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY 476
C++D L RAGR++EA++ I MPF A + LL +CR G+ E K A+ LL LDP
Sbjct: 1342 CLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPS 1401
Query: 477 NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPY 536
+ ++YVLLS+IYA+ +WD V+ R M+ K V+KDPG SWI K++VH+F DD S P
Sbjct: 1402 DSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQ 1461
Query: 537 SDQIYAELEKLNRKMIKEG-YVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
+ IY ++E L +++ +EG YVPD L DVE EK + L +HSEKLAIAFGL+ PP
Sbjct: 1462 ASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPS 1521
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
IRV+KNLRVC DCH+A K ISK+TQREI++RDA RFH F+NG CSCGD+W
Sbjct: 1522 ATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/543 (25%), Positives = 254/543 (46%), Gaps = 65/543 (11%)
Query: 5 DGVSWNLLISGHA-----SHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
D V+WN +++ +A S+ +V + +++ L+ + G +++R+T + +L + V
Sbjct: 676 DLVTWNSILAAYAQFADSSYENVLEGFRLFGLLREFGF-SITRLTLAPLLKLCLLSGFVQ 734
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+ +HG+ +K GF +FV LV++Y K GL+ A+ FD++PE++ V++N M+ +
Sbjct: 735 VSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYV 794
Query: 120 RRGLVEESRRLFRG---------------------------------------MK----D 136
+E+ R F MK D
Sbjct: 795 ENSFQDEALRFFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFD 854
Query: 137 KDS--ISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGK 194
+ S +W +T + G AID F+ + + D T +L+A G L+ G+
Sbjct: 855 QGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGE 914
Query: 195 QIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNG 254
QIHA +I++ V V ++L++MY K + AE F +++SW M+ Y QN
Sbjct: 915 QIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNN 974
Query: 255 CSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE---GTQFHGRSLVTGLISFIT 311
EA+ F ++ R+G++PD FTL SV+ +C+ E G+Q H ++ G+I+
Sbjct: 975 LEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSF 1034
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG 371
VS AL+ Y K G ++++ L + D SW A++ GY K K+ + ++ F M G
Sbjct: 1035 VSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMG 1094
Query: 372 LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH----YTCMIDILSRAGR 427
+ DE+TL + A +++G+ ++ Y I+ ++ + ++D+ + G
Sbjct: 1095 IPIDEITLATAIKASGCLINLKQGKQ-----IQAYAIKLGFNNDLWVSSGVLDMYIKCGD 1149
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSI 487
+ A ++ PD + W T++S +G+ E + L+ + P Y + I
Sbjct: 1150 MPNALELFGEIS-RPDEVAWTTMISGYIENGD-EDHALSVYHLMRVSGVQPDEYTFATLI 1207
Query: 488 YAS 490
AS
Sbjct: 1208 KAS 1210
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 184/432 (42%), Gaps = 58/432 (13%)
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
LG++ H I+ G ++ + L+ MY+K G + A++ FD+ ++++V +N+++
Sbjct: 629 LGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYA 688
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ DS S+ ++ G GL RE G ++ + T
Sbjct: 689 QFA---------------DS-SYENVLEGFRLFGLLREF----------GFSITRLTLAP 722
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L C ++ + +H + ++ + ++FV ALV++YCK + A +F M ++
Sbjct: 723 LLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERD 782
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC-ANLASLEEGTQFH 298
V W ML Y +N +EA++ F R+G PD L VI +++++ +
Sbjct: 783 AVLWNVMLKAYVENSFQDEALRFFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQ 842
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
++ + F SN +W ++ + G+
Sbjct: 843 VKAYAMKMFPFDQGSNIF--------------------------AWNKKLTEFLHAGQIV 876
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
ID F+ +L + D VTL+ +LSA A ++ G +++K P+ +
Sbjct: 877 AAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKS-SFAPVVPVSNSL 935
Query: 419 IDILSRAGRLEEA-KSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
+++ S+AG + A K+FIN D I W T++SS N+E+ L D
Sbjct: 936 MNMYSKAGVVYAAEKTFINSPEL--DLISWNTMISS-YAQNNLEMEAICTFRDLLRDGLK 992
Query: 478 PASYVLLSSIYA 489
P + L S + A
Sbjct: 993 PDQFTLASVLRA 1004
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 7/225 (3%)
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
L+ GK+ HA I+ + + ++ + L+ MY KC S+ A VF + +++V+W ++L
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686
Query: 250 YGQNGCSE-----EAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
Y Q S E ++F ++ G TL ++ C ++ HG ++
Sbjct: 687 YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKI 746
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G + VS ALV Y K G + + LF++M RD V W ++ Y + +E + F
Sbjct: 747 GFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFF 806
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
G PD L V+ + + RH + VK Y ++
Sbjct: 807 SAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQ--VKAYAMK 849
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 7/175 (4%)
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
S +A L+ G + H R + +G + ++N L+T Y KCG++ + ++F++ + RD V+
Sbjct: 620 SAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVT 679
Query: 344 WTALVSGYAKFGKAN-----ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
W ++++ YA+F ++ E LF + G +TL +L C +G V+
Sbjct: 680 WNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETV 739
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
VK G +++I + G + +A+ +KMP DA+ W +L +
Sbjct: 740 HGYAVK-IGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKA 792
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 260/649 (40%), Positives = 400/649 (61%), Gaps = 21/649 (3%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN L+SG+A +G V++A +V+ D + + I+++ +L V
Sbjct: 137 MPEKDVVSWNSLLSGYAQNGYVDEAREVF-----DNMPEKNSISWNGLLAAY-----VHN 186
Query: 61 GRQIHGHILKFGFGSYVFVG-SPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
GR +L + + + L+ + + + DA+ FD++P ++ + +NTMI+G
Sbjct: 187 GRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYA 246
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ G + ++RRLF +D +WT M++G +QNG+ EA F EM + ++ ++ +
Sbjct: 247 QGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK----NEVSYNA 302
Query: 180 VLTACGGLLALEEGKQI-HAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
++ ++ +++ + RN N ++ Y + I A F M +
Sbjct: 303 MIAGYVQTKKMDIARELFESMPCRNISSWNT-----MITGYGQIGDIAQARKFFDMMPQR 357
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+ VSW A++ GY Q+G EEA+ +F ++++G + T G +S+CA++A+LE G Q H
Sbjct: 358 DCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIH 417
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G+++ G + V NAL+ Y KCG+I++++ F + +D VSW +++GYA+ G
Sbjct: 418 GQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGR 477
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
+ + +FE M + G+KPDE+T++GVLSACS GL+++G YF M K+YG+ P HYTCM
Sbjct: 478 QALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCM 537
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
ID+L RAGRLEEA+ I MPF P A W LL + RIHGN E+G+ AAE + +++P N
Sbjct: 538 IDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNS 597
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
YVLLS++YA+ G+W ++R MR+ GV+K PG SW++ ++++H FS D S P +
Sbjct: 598 GMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKE 657
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
+IYA LE+L+ KM +EGYV VLHDVE EK ML +HSEKLA+AFG+L IP G PI
Sbjct: 658 RIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPI 717
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RV+KNLRVC DCH+A K+ISKI R I++RD+ RFH F G CSCGD+W
Sbjct: 718 RVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 213/457 (46%), Gaps = 33/457 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D + WN IS H +G + A+ V+N M + S ++++ M+ +L R +
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRR-----SSVSYNAMISGYLRNSKFNLARNL 102
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
+ + +F + ++ Y + + DA+R FD +PEK++V +N++++G + G V
Sbjct: 103 FDQMPE----RDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYV 158
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+E+R +F M +K+SISW ++ + NG EA LF D ++ ++
Sbjct: 159 DEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKS----DWDLISWNCLM--- 211
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
GG + ++ + +D + + ++ Y + + A +F ++V +WT
Sbjct: 212 GGFVRKKKLGDARWLFDKMPVRDAI-SWNTMISGYAQGGGLSQARRLFDESPTRDVFTWT 270
Query: 245 AMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
AM+ GY QNG +EA F M ++N + + G V + ++A R L
Sbjct: 271 AMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIA----------RELF 320
Query: 304 TGL-ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
+ I+ N ++T YG+ G+I + + F+ M RD VSW A+++GYA+ G E ++
Sbjct: 321 ESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALN 380
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK-EYGIRPIHDHYTCMIDI 421
+F ++ G + T LS C+ +E G+ VK YG + ++ +
Sbjct: 381 MFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGN--ALLAM 438
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ G ++EA + D + W T+L+ HG
Sbjct: 439 YFKCGSIDEANDTFEGIE-EKDVVSWNTMLAGYARHG 474
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 128/260 (49%), Gaps = 57/260 (21%)
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
GL++ G YF M +EY + P HYTCMID+L R RLEE
Sbjct: 777 TGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE-----------------G 819
Query: 449 TLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
LL + RIHGN E+G+ AA+ ++ P N +S+ MR+ G
Sbjct: 820 ALLGASRIHGNTELGEKAAQMFFKMGPQNSG-----------------ISK----MRDVG 858
Query: 509 VRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVE 568
V+K PG SW + ++++H FS + S + I LE+L+ KM + + +
Sbjct: 859 VQKVPGYSWFEVQNKIHTFSVGLFLSRERENI-GFLEELDLKMREREEEKERT------- 910
Query: 569 LSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN-LRVCSDCHNATKYISKITQREILV 627
L + SE LA A G+L IP G P RV+K + VC DC +A K++SKI R I +
Sbjct: 911 -------LKYLSENLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIVGRLITL 963
Query: 628 RDAVRFHLFKNGECSCGDFW 647
RD+ H F CSCG++W
Sbjct: 964 RDS---HRFNESICSCGEYW 980
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 162/359 (45%), Gaps = 26/359 (7%)
Query: 103 LPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLF 162
+ + +I+ +N I+ +R G + + +F M + S+S+ MI+G ++N A +LF
Sbjct: 44 VKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLF 103
Query: 163 REMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC 222
+M D F++ +LT L + +++ + D V ++L+ Y +
Sbjct: 104 DQMP----ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKD----VVSWNSLLSGYAQN 155
Query: 223 KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
+ A VF M KN +SW +L Y NG EEA +F + + D + ++
Sbjct: 156 GYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLF----ESKSDWDLISWNCLM 211
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
L + + V IS+ N +++ Y + G + + RLF+E RD
Sbjct: 212 GGFVRKKKLGDARWLFDKMPVRDAISW----NTMISGYAQGGGLSQARRLFDESPTRDVF 267
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
+WTA+VSGY + G +E F++M + +EV+ +++ + ++ R FE M
Sbjct: 268 TWTAMVSGYVQNGMLDEAKTFFDEM----PEKNEVSYNAMIAGYVQTKKMDIARELFESM 323
Query: 403 VKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
R I + MI + G + +A+ F + MP D + WA +++ G+ E
Sbjct: 324 P----CRNI-SSWNTMITGYGQIGDIAQARKFFDMMP-QRDCVSWAAIIAGYAQSGHYE 376
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 249/603 (41%), Positives = 362/603 (60%), Gaps = 32/603 (5%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
++++L +R+ + G+Q+H + GFG + + LV++Y + A+ FD +P
Sbjct: 78 YASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIP 137
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
+ NI + W +I G NG A+ L+ +
Sbjct: 138 KHNIFL-------------------------------WNVLIRGYAWNGPYEAAVQLYYQ 166
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M GL D FTF VL AC L A+E G++IH +++ + +VFVG+AL+DMY KC
Sbjct: 167 MFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGC 226
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A VF + ++ V W +ML Y QNG + + + M G+ P + TL + IS+
Sbjct: 227 VGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISA 286
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
A+ A+L +G + HG S S V ALV Y KCG++ + LF + V+ VSW
Sbjct: 287 SADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSW 346
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
A+++GYA G A E +DLFE+M + KPD +T +GVLSACS GL+E+G +FE M++
Sbjct: 347 NAMITGYAMHGHATEALDLFEEM-NRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIR 405
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
+Y I P HYTCM+D+L +GRL+EA + I +M PD+ W LL+SC+IH NVE+G+
Sbjct: 406 DYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGE 465
Query: 465 WAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRV 524
A E L+EL+P + +YV+LS+IYA GKW+ V++LR+ M ++ ++K CSWI+ K++V
Sbjct: 466 IALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKV 525
Query: 525 HIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLA 584
H F + D S P SD+IY+ELE++ M + GY P SV HDVE EK M+ HSE+LA
Sbjct: 526 HAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLA 585
Query: 585 IAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCG 644
IAFGL+ PPG + + KNLR+C DCH A K+ISKIT+REI VRD R+H FK+G CSCG
Sbjct: 586 IAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCG 645
Query: 645 DFW 647
D+W
Sbjct: 646 DYW 648
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 191/389 (49%), Gaps = 43/389 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P H+ WN+LI G+A +G AV++Y M GL TF +L ++ ++
Sbjct: 136 IPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVP-DNFTFPFVLKACAALSAIEH 194
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR+IH H+++ G+ VFVG+ L+DMYAK G + A+ FD++ ++ V+
Sbjct: 195 GREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVL---------- 244
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
W +M+ QNG + L EM L GL + T +
Sbjct: 245 ---------------------WNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTA 283
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
++A AL +G+++H R + + + V +ALVDMY KC S++ A ++F + K V
Sbjct: 284 ISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRV 343
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW AM+ GY +G + EA+ +F M R +PD T V+S+C++ LEEG F
Sbjct: 344 VSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFF-E 401
Query: 301 SLVTGLISFITVSN--ALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALVSGYAKFGKA 357
+++ TV + +V G G +++++ L +M V D W AL++ K
Sbjct: 402 TMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNS----CKI 457
Query: 358 NETIDLFEKMLSH--GLKPDEVTLIGVLS 384
+ ++L E L L+PD+ +LS
Sbjct: 458 HANVELGEIALERLIELEPDDAGNYVILS 486
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 101/220 (45%), Gaps = 3/220 (1%)
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
+ P S++ SC +++ G Q H + + G ++ LV Y C ++ +
Sbjct: 71 LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130
Query: 331 RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
LF+ + + W L+ GYA G + L+ +M +GL PD T VL AC+
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALS 190
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATL 450
+E GR E +V+ + + +ID+ ++ G + A+ +K+ DA+ W ++
Sbjct: 191 AIEHGREIHEHVVQTGWEKDVFVG-AALIDMYAKCGCVGSAREVFDKI-LVRDAVLWNSM 248
Query: 451 LSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYAS 490
L++ +G+ + + S + L P L+++I AS
Sbjct: 249 LAAYSQNGHPD-ACLSLCSEMVLTGLRPTEATLVTAISAS 287
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 265/659 (40%), Positives = 384/659 (58%), Gaps = 38/659 (5%)
Query: 26 VKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVD 85
++V++ ML G+ SR+ T++ ++ + G+Q+H L G G V S L+
Sbjct: 59 IRVFSYMLTQGIVPDSRV-LPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLH 117
Query: 86 MYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDK----DSIS 141
MY + + DA+ FD+LP+ +V + +I+ R+G V+E++ LF +D + +S
Sbjct: 118 MYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVS 177
Query: 142 WTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFII 201
W MI+G ++G +A+ +F+ M LEGL D + SVL A G L G QIH ++I
Sbjct: 178 WNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVI 237
Query: 202 RNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM-------------------------- 235
+ + FV SAL+DMY KC VF M
Sbjct: 238 KQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALE 297
Query: 236 AWK-------NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL 288
+K NVVSWT+M+ QNG EA+++F MQ G++P+ T+ ++ +C N+
Sbjct: 298 VFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNI 357
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
A+L G H SL G+ + + V +AL+ Y KCG + S F+ M R+ VSW +L+
Sbjct: 358 AALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLM 417
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
+GYA GK E I++FE M G KPD V+ VLSAC++ GL E+G YF+ M + +G+
Sbjct: 418 AGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGV 477
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
+HY+CM+ +L R+GRLEEA + I +MPF PD+ W LLSSCR+H V++G+ AA+
Sbjct: 478 EARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIAAK 537
Query: 469 SLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFS 528
+ EL+P NP +Y+LLS+IYASK W V +R MR +G++K+PG SWI+ K++VH+
Sbjct: 538 RVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVHMLL 597
Query: 529 ADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFG 588
A D S P QI +L KL +M K GYVP VL DVE +K ++L HSEKLA+ G
Sbjct: 598 AGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQDVEEQDKEQILCGHSEKLAVVLG 657
Query: 589 LLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LL PG P++V+KNLR+C DCH K+IS +REI VRD RFH FK G CSCGD+W
Sbjct: 658 LLNTKPGFPLQVIKNLRICRDCHAVIKFISDFEKREIFVRDTNRFHQFKGGVCSCGDYW 716
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 126/347 (36%), Positives = 193/347 (55%), Gaps = 5/347 (1%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSWN +ISG GS DAV ++ M +GL + S++L +G QIH
Sbjct: 176 VSWNGMISGFNRSGSYLDAVLMFQNMHLEGL-KPDGTSVSSVLPAVGDLDMPLMGIQIHC 234
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+++K G G FV S L+DMY K + F+E+ E ++ N ++TGL R GLV+
Sbjct: 235 YVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDN 294
Query: 127 SRRLFRGMK--DKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ +F+ K D + +SWT+MI QNG + EA++LFREM++EG+ + T +L AC
Sbjct: 295 ALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPAC 354
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G + AL GK H F +RN ++V+VGSAL+DMY KC + + F M +N+VSW
Sbjct: 355 GNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWN 414
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQFHGRSLV 303
+++ GY +G + EA+ IF MQR G +PD + V+S+C EEG F S
Sbjct: 415 SLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRN 474
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVS 349
G+ + + + +VT G+ G +E+++ + +M D W AL+S
Sbjct: 475 HGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLS 521
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 100/192 (52%), Gaps = 1/192 (0%)
Query: 219 YCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
+C C + K + S K +S + + + +++F M GI PD L
Sbjct: 18 HCLCSATKASLSQAHAHILKTGISLPETIQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVL 77
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
+VI +CA L++L+ G Q H +LV+GL V ++L+ Y + +++D+ +F+++
Sbjct: 78 PTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQ 137
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
V+ +AL+S +A+ G+ ET +LF + G++ + V+ G++S +R+G
Sbjct: 138 PGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLM 197
Query: 399 FEIMVKEYGIRP 410
F+ M E G++P
Sbjct: 198 FQNMHLE-GLKP 208
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 260/647 (40%), Positives = 379/647 (58%), Gaps = 34/647 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSW L++G+A +G A+++ L +++ +T ++L + + + +
Sbjct: 206 MQHKDLVSWTTLVAGYAQNGHAKRALQLV-LQMQEAGQKPDSVTLVSILPAVADMKALRI 264
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR IHG+ + GF S V V + L+DMY K G A
Sbjct: 265 GRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIA------------------------ 300
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
R +F+GM+ K +SW TMI G QNG EA F +M EG + T V
Sbjct: 301 -------RLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGV 353
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L LE G +H + + NV V ++L+ MY KCK + A S+F + NV
Sbjct: 354 LLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNV 413
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+W AM++GY QNGC +EA+ +FC MQ GI+ D FTL VI++ A+ + + HG
Sbjct: 414 -TWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGL 472
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ + + + VS ALV Y KCG I+ + +LF+ M R ++W A++ GY G ET
Sbjct: 473 AVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKET 532
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+DLF +M +KP+++T + V+SACS +G VE+G F+ M ++Y + P DHY+ M+D
Sbjct: 533 LDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVD 592
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG+L++A +FI +MP P +L +C+IH NVE+G+ AA+ L +LDP
Sbjct: 593 LLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGY 652
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
+VLL++IYAS WD V+++R M +KG+ K PGCSW++ ++ +H F + + P S +I
Sbjct: 653 HVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKI 712
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
YA LE L ++ GYVPD S+ HDVE K ++L+ HSE+LAIAFGLL PG + +
Sbjct: 713 YAFLETLGDEIKAAGYVPDPDSI-HDVEEDVKKQLLSSHSERLAIAFGLLNTSPGTTLHI 771
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCH+ TKYIS +T REI+VRD RFH FKNG CSCGD+W
Sbjct: 772 RKNLRVCGDCHDTTKYISLVTGREIIVRDLRRFHHFKNGSCSCGDYW 818
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 143/489 (29%), Positives = 235/489 (48%), Gaps = 48/489 (9%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V +++++ G+A + S+ DA+ + M+ D + L ++ +L + + GR+IHG
Sbjct: 111 VLYHIMLKGYAKNSSLGDALCFFLRMMCDEV-RLVVGDYACLLQLCGENLDLKKGREIHG 169
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
I+ GF S +FV + ++ +YAK I +
Sbjct: 170 LIITNGFESNLFVMTAVMSLYAKCRQI-------------------------------DN 198
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+ ++F M+ KD +SWTT++ G QNG + A+ L +M+ G D T S+L A
Sbjct: 199 AYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVAD 258
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+ AL G+ IH + R+ + V V +AL+DMY KC S + A VF+ M K VVSW M
Sbjct: 259 MKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTM 318
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ G QNG SEEA F M G P T+ V+ +CANL LE G H L
Sbjct: 319 IDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKL 378
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
S ++V N+L++ Y KC ++ + +FN + + V+W A++ GYA+ G E ++LF
Sbjct: 379 DSNVSVMNSLISMYSKCKRVDIAASIFNNLE-KTNVTWNAMILGYAQNGCVKEALNLFCM 437
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH----YTCMIDIL 422
M S G+K D TL+GV++A + + + + + +R D+ T ++D+
Sbjct: 438 MQSQGIKLDCFTLVGVITALADFSVNRQAK-----WIHGLAVRACMDNNVFVSTALVDMY 492
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD--PYNPAS 480
++ G ++ A+ + M I W ++ HG +GK + E+ P
Sbjct: 493 AKCGAIKTARKLFDMMQ-ERHVITWNAMIDGYGTHG---VGKETLDLFNEMQKGAVKPND 548
Query: 481 YVLLSSIYA 489
LS I A
Sbjct: 549 ITFLSVISA 557
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 177/330 (53%), Gaps = 2/330 (0%)
Query: 110 MYNTMITGLL-RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE 168
++ T + L + G E+ R+F ++ K + + M+ G +N +A+ F M +
Sbjct: 80 LFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCD 139
Query: 169 GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYA 228
+ + + +L CG L L++G++IH II N + N+FV +A++ +Y KC+ I A
Sbjct: 140 EVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNA 199
Query: 229 ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL 288
+F M K++VSWT ++ GY QNG ++ A+++ MQ G +PD TL S++ + A++
Sbjct: 200 YKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADM 259
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
+L G HG + +G S + V+NAL+ Y KCG+ + +F M + VSW ++
Sbjct: 260 KALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMI 319
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
G A+ G++ E F KML G P VT++GVL AC+ G +E+G + ++ + +
Sbjct: 320 DGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERG-WFVHKLLDKLKL 378
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
+I + S+ R++ A S N +
Sbjct: 379 DSNVSVMNSLISMYSKCKRVDIAASIFNNL 408
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 125/271 (46%), Gaps = 2/271 (0%)
Query: 191 EEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGY 250
+E QI FII+N + + ++ ++CK S A VF + K V + ML GY
Sbjct: 61 KELYQILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGY 120
Query: 251 GQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFI 310
+N +A+ F M + + ++ C L++G + HG + G S +
Sbjct: 121 AKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNL 180
Query: 311 TVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH 370
V A+++ Y KC I++++++F M +D VSWT LV+GYA+ G A + L +M
Sbjct: 181 FVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEA 240
Query: 371 GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEE 430
G KPD VTL+ +L A + + GR + G + + ++D+ + G
Sbjct: 241 GQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRS-GFESLVNVTNALLDMYFKCGSARI 299
Query: 431 AKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
A+ M + W T++ C +G E
Sbjct: 300 ARLVFKGMR-SKTVVSWNTMIDGCAQNGESE 329
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 500 bits (1287), Expect = e-138, Method: Compositional matrix adjust.
Identities = 259/649 (39%), Positives = 401/649 (61%), Gaps = 21/649 (3%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN L+SG+A +G V++A +V+ D + + I+++ +L V
Sbjct: 137 MPEKDVVSWNSLLSGYAQNGYVDEAREVF-----DNMPEKNSISWNGLLAAY-----VHN 186
Query: 61 GRQIHGHILKFGFGSYVFVG-SPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
GR +L + + + L+ + + + DA+ FD++P ++ + +NTMI+G
Sbjct: 187 GRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYA 246
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ G + ++RRLF +D +WT M++G +QNG+ EA F EM + ++ ++ +
Sbjct: 247 QGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK----NEVSYNA 302
Query: 180 VLTACGGLLALEEGKQI-HAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
++ ++ +++ + RN + + ++ Y + I A F M +
Sbjct: 303 MIAGYVQTKKMDIARELFESMPCRN-----ISSWNTMITGYGQIGDIAQARKFFDMMPQR 357
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+ VSW A++ GY Q+G EEA+ +F ++++G + T G +S+CA++A+LE G Q H
Sbjct: 358 DCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIH 417
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G+++ G + V NAL+ Y KCG+I++++ F + +D VSW +++GYA+ G
Sbjct: 418 GQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGR 477
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
+ + +FE M + G+KPDE+T++GVLSACS GL+++G YF M K+YG+ P HYTCM
Sbjct: 478 QALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCM 537
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
ID+L RAGRLEEA+ I MPF P A W LL + RIHGN E+G+ AAE + +++P N
Sbjct: 538 IDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNS 597
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
YVLLS++YA+ G+W ++R MR+ GV+K PG SW++ ++++H FS D S P +
Sbjct: 598 GMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKE 657
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
+IYA LE+L+ KM +EGYV VLHDVE EK ML +HSEKLA+AFG+L IP G PI
Sbjct: 658 RIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPI 717
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RV+KNLRVC DCH+A K+ISKI R I++RD+ RFH F G CSCGD+W
Sbjct: 718 RVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 213/457 (46%), Gaps = 33/457 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D + WN IS H +G + A+ V+N M + S ++++ M+ +L R +
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRR-----SSVSYNAMISGYLRNSKFNLARNL 102
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
+ + +F + ++ Y + + DA+R FD +PEK++V +N++++G + G V
Sbjct: 103 FDQMPERD----LFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYV 158
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+E+R +F M +K+SISW ++ + NG EA LF D ++ ++
Sbjct: 159 DEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKS----DWDLISWNCLM--- 211
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
GG + ++ + +D + + ++ Y + + A +F ++V +WT
Sbjct: 212 GGFVRKKKLGDARWLFDKMPVRDAI-SWNTMISGYAQGGGLSQARRLFDESPTRDVFTWT 270
Query: 245 AMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
AM+ GY QNG +EA F M ++N + + G V + ++A R L
Sbjct: 271 AMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIA----------RELF 320
Query: 304 TGL-ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
+ I+ N ++T YG+ G+I + + F+ M RD VSW A+++GYA+ G E ++
Sbjct: 321 ESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALN 380
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK-EYGIRPIHDHYTCMIDI 421
+F ++ G + T LS C+ +E G+ VK YG + ++ +
Sbjct: 381 MFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGN--ALLAM 438
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ G ++EA + D + W T+L+ HG
Sbjct: 439 YFKCGSIDEANDTFEGIE-EKDVVSWNTMLAGYARHG 474
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 162/359 (45%), Gaps = 26/359 (7%)
Query: 103 LPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLF 162
+ + +I+ +N I+ +R G + + +F M + S+S+ MI+G ++N A +LF
Sbjct: 44 VKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLF 103
Query: 163 REMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC 222
+M D F++ +LT L + +++ + D V ++L+ Y +
Sbjct: 104 DQMP----ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKD----VVSWNSLLSGYAQN 155
Query: 223 KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
+ A VF M KN +SW +L Y NG EEA +F + + D + ++
Sbjct: 156 GYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLF----ESKSDWDLISWNCLM 211
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
L + + V IS+ N +++ Y + G + + RLF+E RD
Sbjct: 212 GGFVRKKKLGDARWLFDKMPVRDAISW----NTMISGYAQGGGLSQARRLFDESPTRDVF 267
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
+WTA+VSGY + G +E F++M + +EV+ +++ + ++ R FE M
Sbjct: 268 TWTAMVSGYVQNGMLDEAKTFFDEM----PEKNEVSYNAMIAGYVQTKKMDIARELFESM 323
Query: 403 VKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
R I + MI + G + +A+ F + MP D + WA +++ G+ E
Sbjct: 324 P----CRNI-SSWNTMITGYGQIGDIAQARKFFDMMP-QRDCVSWAAIIAGYAQSGHYE 376
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 500 bits (1287), Expect = e-138, Method: Compositional matrix adjust.
Identities = 241/588 (40%), Positives = 371/588 (63%)
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
L RQ+H G + F + L+ YA LG A+ F+ +P++N++ +N +I G +
Sbjct: 60 LLRQLHAFAATSGAAADRFTANHLLLAYADLGDFPTARGLFERIPKRNVMSWNILIGGYV 119
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ G +E +R+LF M ++ +W M+ GL +GL E++ F MR EG+ D++ GS
Sbjct: 120 KNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGS 179
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+ C GL + G+Q+HA+++R+ ++ VGS+L MY +C ++ E+ R + N
Sbjct: 180 LFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLN 239
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+VS + G QNG +E A++ FC M+ G+E + T S ++SC++LA+L +G Q H
Sbjct: 240 IVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHA 299
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
++ TG+ + V +LV Y +CG + DS R+ E + D V +A++S Y G +
Sbjct: 300 LAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQK 359
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ LF++M++ G +P+EVT + +L ACS +GL ++G + FE+M K YG++P HYTC++
Sbjct: 360 AVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIV 419
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L R+G L EA+ I MP PD + W TLLS+C+ ++ + AE ++ELDP++ A
Sbjct: 420 DLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIELDPHDSA 479
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
SYVLLS+I A+ +W+ VS++R TMRE+ VRK+PG SW++ K ++H F D S +
Sbjct: 480 SYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQRE 539
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
I LE++ ++ + GY PDMS V HD+E EK L HHSEKLAIAF L +P G+PIR
Sbjct: 540 IVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIR 599
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V+KNLRVC DCH A K +SK+ REI+VRD RFH FK+G+CSCGD+W
Sbjct: 600 VMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 647
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 207/492 (42%), Gaps = 84/492 (17%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLM----------LKDGLGN--LSRITFSTM 48
+P + +SWN+LI G+ +G + A K+++ M + GL N L+ +
Sbjct: 103 IPKRNVMSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFF 162
Query: 49 LIM-------------SSSRRCVDL-----GRQIHGHILKFGFGSYVFVGSPLVDMYAKL 90
M S R C L GRQ+H ++++ G + VGS L MY +
Sbjct: 163 FAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRC 222
Query: 91 GLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLM 150
G + D + LP NIV NT I+G
Sbjct: 223 GFLRDGEAALRALPSLNIVSCNT-------------------------------TISGRT 251
Query: 151 QNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVF 210
QNG A++ F MR G+ + TF S +T+C L AL +G+QIHA I+ V
Sbjct: 252 QNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVP 311
Query: 211 VGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
V ++LV MY +C + +E V + ++V +AM+ YG +G ++AV +F M G
Sbjct: 312 VMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAG 371
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQ-FHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
EP++ T +++ +C++ +EG F + GL + +V G+ G + ++
Sbjct: 372 AEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEA 431
Query: 330 HRLFNEMNVR-DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDE------VTLIGV 382
L M V+ D V W L+S K + D+ E++ ++ D V L +
Sbjct: 432 EDLILSMPVQPDGVIWKTLLSAC----KTQKKFDMAERIAERVIELDPHDSASYVLLSNI 487
Query: 383 LSACSRAGLVEKGRHYF--EIMVKEYGIRPI----HDHYTCMIDILSRAGR-----LEEA 431
+ SR V K R + + KE G+ + H C D R LEE
Sbjct: 488 RATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREIVECLEEM 547
Query: 432 KSFINKMPFPPD 443
+ I + + PD
Sbjct: 548 MTRIRQCGYAPD 559
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 500 bits (1287), Expect = e-138, Method: Compositional matrix adjust.
Identities = 254/643 (39%), Positives = 404/643 (62%), Gaps = 37/643 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V+WN +ISG+A++G +A+ ++ M + + LS +F++++ + ++ + + Q+H
Sbjct: 261 VTWNSMISGYAANGLDLEALGMFYSMRLNYV-RLSESSFASVIKLCANLKELRFTEQLHC 319
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++K+GF + + L+ Y+K + DA R F E+ G V
Sbjct: 320 SVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEI------------------GCV-- 359
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+ +SWT MI+G +QN + EA+DLF EM+ +G+ ++FT+ +LTA
Sbjct: 360 ----------GNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA--- 406
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L + ++HA +++ +++ + VG+AL+D Y K ++ A VF + K++V+W+AM
Sbjct: 407 -LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAM 465
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL-ASLEEGTQFHGRSLVTG 305
L GY Q G +E A+K+F + + GI+P++FT S+++ CA AS+ +G QFHG ++ +
Sbjct: 466 LAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSR 525
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
L S + VS+AL+T Y K GNIE + +F +D VSW +++SGYA+ G+A + +D+F+
Sbjct: 526 LDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFK 585
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
+M +K D VT IGV +AC+ AGLVE+G YF+IMV++ I P +H +CM+D+ SRA
Sbjct: 586 EMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRA 645
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
G+LE+A I MP P + W T+L++CR+H E+G+ AAE ++ + P + A+YVLLS
Sbjct: 646 GQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLS 705
Query: 486 SIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELE 545
++YA G W +++R+ M E+ V+K+PG SWI+ K++ + F A D S P DQIY +LE
Sbjct: 706 NMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLE 765
Query: 546 KLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
L+ ++ GY PD S VL D++ K +L HSE+LAIAFGL+ P G P+ ++KNLR
Sbjct: 766 DLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLR 825
Query: 606 VCSDCHNATKYISKITQREILVRDAVRFHLF-KNGECSCGDFW 647
VC DCH K I+KI +REI+VRD+ RFH F +G CSCGDFW
Sbjct: 826 VCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/466 (28%), Positives = 228/466 (48%), Gaps = 49/466 (10%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL- 60
P D S+ L+ G + G +A +++ + + G+ + FS++L +S++ C +L
Sbjct: 54 PGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGM-EMDCSIFSSVLKVSATL-CDELF 111
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H +KFGF V VG+ LVD Y K D ++ FDE+ E+N+V + T+I+G R
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
N + E + LF M+ EG + FTF +
Sbjct: 172 -------------------------------NSMNDEVLTLFMRMQNEGTQPNSFTFAAA 200
Query: 181 LTACGGLLALE----EGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
L G+LA E G Q+H +++N + V ++L+++Y KC +++ A +F
Sbjct: 201 L----GVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTE 256
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
K+VV+W +M+ GY NG EA+ +F +M+ N + + + SVI CANL L Q
Sbjct: 257 VKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQ 316
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN-VRDEVSWTALVSGYAKFG 355
H + G + + AL+ Y KC + D+ RLF E+ V + VSWTA++SG+ +
Sbjct: 317 LHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQND 376
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
E +DLF +M G++P+E T +L+A ++ + +++ Y
Sbjct: 377 GKEEAVDLFSEMKRKGVRPNEFTYSVILTALP---VISPSEVHAQVVKTNYERSSTVG-- 431
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
T ++D + G++EEA + + D + W+ +L+ G E
Sbjct: 432 TALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAGYAQTGETE 476
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 232/465 (49%), Gaps = 48/465 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + V+W LISG+A + S+ND V + +++ + TF+ L + +
Sbjct: 154 MKERNVVTWTTLISGYARN-SMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGR 212
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+H ++K G + V + L+++Y L+
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLY-------------------------------LK 241
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G V ++R LF + K ++W +MI+G NGL+ EA+ +F MRL + + + +F SV
Sbjct: 242 CGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASV 301
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW-KN 239
+ C L L +Q+H +++ + + +AL+ Y KC ++ A +F+ + N
Sbjct: 302 IKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGN 361
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VVSWTAM+ G+ QN EEAV +F M+R G+ P++FT ++++ ++ ++ H
Sbjct: 362 VVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP----SEVHA 417
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ + T TV AL+ Y K G +E++ ++F+ ++ +D V+W+A+++GYA+ G+
Sbjct: 418 QVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEA 477
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGL-VEKGRHYFEIMVKEYGIRPIHDHYTC- 417
I +F ++ G+KP+E T +L+ C+ + +G+ + + I+ D C
Sbjct: 478 AIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQF-----HGFAIKSRLDSSLCV 532
Query: 418 ---MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
++ + ++ G +E A+ + K D + W +++S HG
Sbjct: 533 SSALLTMYAKKGNIESAEE-VFKRQREKDLVSWNSMISGYAQHGQ 576
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 161/337 (47%), Gaps = 8/337 (2%)
Query: 122 GLVEESR-----RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
G V SR LF +D S+ +++ G ++G +EA LF + G+ MD
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
F SVL L G+Q+H I+ D+V VG++LVD Y K + K VF M
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
+NVV+WT ++ GY +N ++E + +F MQ G +P+ FT + + A G Q
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H + GL I VSN+L+ Y KCGN+ + LF++ V+ V+W +++SGYA G
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVE-KGRHYFEIMVKEYGIRPIHDHY 415
E + +F M + ++ E + V+ C A L E + V +YG +
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLC--ANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
T ++ S+ + +A ++ + + W ++S
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMIS 370
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 113/236 (47%), Gaps = 40/236 (16%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTML-IMSSSRRCVDLGRQ 63
D V+W+ +++G+A G A+K++ + K G+ + TFS++L + +++ + G+Q
Sbjct: 458 DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGI-KPNEFTFSSILNVCAATNASMGQGKQ 516
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
HG +K S + V S L+ MYAK G I A+ F EK++V +N+MI+
Sbjct: 517 FHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMIS------- 569
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
G Q+G +A+D+F+EM+ + MD TF V A
Sbjct: 570 ------------------------GYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAA 605
Query: 184 CGGLLALEEGKQIHAFIIRN----DHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
C +EEG++ ++R+ K++ S +VD+Y + ++ A V M
Sbjct: 606 CTHAGLVEEGEKYFDIMVRDCKIAPTKEH---NSCMVDLYSRAGQLEKAMKVIENM 658
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 257/681 (37%), Positives = 396/681 (58%), Gaps = 44/681 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG--- 61
D V N ++S A AV V++ +L G G+L +S ++S+ + +L
Sbjct: 124 DTVLHNAMMSAFARASLAAPAVSVFHALL--GSGSLRPDDYSFTALISAVGQMHNLAAPH 181
Query: 62 -RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLI---YDAKRGFDELPEKNIVMYNTMITG 117
Q+H +LK G + + V + L+ +Y K +DA++ DE+P+K+ + + TM+ G
Sbjct: 182 CTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVG 241
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
+RRG V +R +F + K + W MI+G +Q+G+ +A +LFR M E + +D+FTF
Sbjct: 242 YVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTF 301
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDH----KDNVFVGSALVDMYCKCKSIKYAESVFR 233
SVL+AC GK +H IIR + + V +ALV +Y K I A+ +F
Sbjct: 302 TSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFD 361
Query: 234 TMAWKNVVSWTAMLVGYGQNGC-------------------------------SEEAVKI 262
TM K+VVSW +L GY +GC SE+A+K+
Sbjct: 362 TMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKL 421
Query: 263 FCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGK 322
F M+ ++P D+T I++C L +L+ G Q H + G + + NAL+T Y K
Sbjct: 422 FNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAK 481
Query: 323 CGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGV 382
CG + D+ +F M D VSW A++S + G E ++LF++M++ G+ PD ++ + +
Sbjct: 482 CGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTI 541
Query: 383 LSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPP 442
L+AC+ AGLV++G HYFE M +++GI P DHY +ID+L R+GR+ EA+ I MPF P
Sbjct: 542 LTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEP 601
Query: 443 DAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRR 502
W +LS CR +G++E G +AA+ L + P + +Y+LLS+ Y++ G+W +++R+
Sbjct: 602 TPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRK 661
Query: 503 TMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSS 562
MR++GV+K+PGCSWI+ S++H+F D P + ++Y LE + +M K GYVPD
Sbjct: 662 LMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKF 721
Query: 563 VLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQ 622
VLHD+E EK +L HSEKLA+ FGLL +PPG + V+KNLR+C DCH A ++SK
Sbjct: 722 VLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVG 781
Query: 623 REILVRDAVRFHLFKNGECSC 643
REI+VRD RFH FK+GECSC
Sbjct: 782 REIVVRDVRRFHHFKDGECSC 802
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 185/431 (42%), Gaps = 61/431 (14%)
Query: 80 GSPLVDMYAKLGLIYDAKRGFDELP--EKNIVMYNTMITGLLRRGLVEESRRLFR----- 132
+ LV A G + DA FD +P ++ V++N M++ R L + +F
Sbjct: 95 ATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGS 154
Query: 133 GMKDKDSISWTTMIT--GLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLAL 190
G D S+T +I+ G M N L + G A +VL+ L+AL
Sbjct: 155 GSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAA-------AVLSVSNALIAL 207
Query: 191 -------EEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
E + KD++ + +V Y + + A SVF + K V W
Sbjct: 208 YMKCDTPEASWDARKVLDEMPDKDDL-TWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVW 266
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR--S 301
AM+ GY Q+G +A ++F M + D+FT SV+S+CAN G HG+
Sbjct: 267 NAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIR 326
Query: 302 LVTGLI--SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTA------------- 346
L + + + V+NALVT Y K G I + R+F+ MN++D VSW
Sbjct: 327 LQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDK 386
Query: 347 ------------------LVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
+VSGY G + + + LF +M + +KP + T G ++AC
Sbjct: 387 AVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGE 446
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
G ++ GR +V + G + ++ + ++ G + +A+ MP D++ W
Sbjct: 447 LGALKHGRQLHAHLV-QCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMP-NLDSVSWN 504
Query: 449 TLLSSCRIHGN 459
++S+ HG+
Sbjct: 505 AMISALGQHGH 515
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 117/259 (45%), Gaps = 40/259 (15%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP+ + +SW +++SG+ G DA+K++N M + + T++ + +
Sbjct: 394 MPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCD-YTYAGAIAACGELGALKH 452
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H H+++ GF + G+ L+ MYAK G + DA+ F +P + V +N MI+ L +
Sbjct: 453 GRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQ 512
Query: 121 RGLVEESRRLFRGMK----DKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
G E+ LF M D D IS+ T++T GL E F M+ +
Sbjct: 513 HGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRD-------- 564
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
FG + G+ DH + L+D+ + I A + +TM
Sbjct: 565 FG-----------ISPGE---------DHY------ARLIDLLGRSGRIGEARDLIKTMP 598
Query: 237 WKNVVS-WTAMLVGYGQNG 254
++ S W A+L G NG
Sbjct: 599 FEPTPSIWEAILSGCRTNG 617
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 93/207 (44%), Gaps = 19/207 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN +IS HG +A+++++ M+ +G+ + RI+F T+L + VD
Sbjct: 495 MPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGI-DPDRISFLTILTACNHAGLVDE 553
Query: 61 GRQIHGHILK-FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITGL 118
G + + FG + L+D+ + G I +A+ +P E ++ +++G
Sbjct: 554 GFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGC 613
Query: 119 LRRGLVE----ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
G +E + +LFR + D ++ + G +A + + MR G+ +
Sbjct: 614 RTNGDMEFGAYAADQLFRMIPQHDG-TYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEP 672
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFII 201
G +E G +IH F++
Sbjct: 673 -----------GCSWIEVGSKIHVFLV 688
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 268/656 (40%), Positives = 385/656 (58%), Gaps = 43/656 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VS+N LI+ +A G A++++ + + G L T S ++I V L
Sbjct: 101 IPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRFG-LDGFTLSGVIIACGDD--VGL 157
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
RQ+H ++ G+ Y V + ++ Y+ R
Sbjct: 158 VRQLHCFVVVCGYDCYASVNNAVLACYS-------------------------------R 186
Query: 121 RGLVEESRRLFRGMKD---KDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
+G + E+RR+FR M + +D +SW MI Q+ EA++LFREM GL +D FT
Sbjct: 187 KGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTM 246
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS-IKYAESVFRTMA 236
SVLTA + L G Q H +I++ N VGS L+D+Y KC + VF +A
Sbjct: 247 ASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIA 306
Query: 237 WKNVVSWTAMLVGYGQ-NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
++V W M+ G+ Q SE+ + F MQ NG PDD + V S+C+NL+S G
Sbjct: 307 APDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGK 366
Query: 296 QFHGRSLVTGL-ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
Q H ++ + + + ++V+NALV Y KCGN+ D+ R+F+ M + VS ++++GYA+
Sbjct: 367 QVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQH 426
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G E++ LFE ML + P+ +T I VLSAC G VE+G+ YF +M + + I P +H
Sbjct: 427 GVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEH 486
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
Y+CMID+L RAG+L+EA+ I MPF P +I WATLL +CR HGNVE+ AA L+L+
Sbjct: 487 YSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLE 546
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS 534
PYN A YV+LS++YAS +W+ + ++R MRE+GV+K PGCSWI+ +VH+F A+D S
Sbjct: 547 PYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSH 606
Query: 535 PYSDQIYAELEKLNRKMIKEGYVPDMSSVL---HDVELSEKIKMLNHHSEKLAIAFGLLF 591
P +I+ + ++ RKM + GYVPD+ L +VE EK + L +HSEKLA+AFGL+
Sbjct: 607 PMIKEIHVYMGEILRKMKQAGYVPDIRWALVKDEEVEPDEKERRLLYHSEKLAVAFGLIS 666
Query: 592 IPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+PI VVKNLR+C DCHNA K IS IT REI VRD RFH FK G CSCGD+W
Sbjct: 667 TEEWVPILVVKNLRICGDCHNAIKLISAITGREITVRDTHRFHCFKEGHCSCGDYW 722
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 266/668 (39%), Positives = 393/668 (58%), Gaps = 57/668 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSWN +IS + ++A+ + LM+ +G+ L +T +++L S +D+G++I
Sbjct: 261 DMVSWNTMISSFSQSDRFSEALAFFRLMVLEGV-ELDGVTIASVLPACSHLERLDVGKEI 319
Query: 65 HGHILKFG-FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
H ++L+ FVGS LVDMY + +R FD + + I +
Sbjct: 320 HAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIEL------------- 366
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAMDQFTFGSVLT 182
W MI+G +NGL+ +A+ LF EM ++ GL + T SV+
Sbjct: 367 ------------------WNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMP 408
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
AC A + IH + ++ K++ +V +AL+DMY + + +E++F +M ++ VS
Sbjct: 409 ACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVS 468
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQR-----------------NGIEPDDFTLGSVISSC 285
W M+ GY +G A+ + MQR +P+ TL +V+ C
Sbjct: 469 WNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGC 528
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
A LA++ +G + H ++ L S ITV +ALV Y KCG + S R+FNEM ++ ++W
Sbjct: 529 AALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWN 588
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHG-----LKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
L+ GK E ++LF+ M++ KP+EVT I V +ACS +GL+ +G + F
Sbjct: 589 VLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFY 648
Query: 401 IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIG-WATLLSSCRIHGN 459
M ++G+ P DHY C++D+L RAG+LEEA +N MP D +G W++LL +CRIH N
Sbjct: 649 RMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQN 708
Query: 460 VEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIK 519
VE+G+ AA++LL L+P + YVLLS+IY+S G W+ ++R+ MR+ GV+K+PGCSWI+
Sbjct: 709 VELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIE 768
Query: 520 YKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHH 579
++ VH F A D S P S+Q++ LE L+ KM KEGYVPD S VLH+V+ EK +L H
Sbjct: 769 FRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGH 828
Query: 580 SEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNG 639
SEKLAIAFG+L PPG IRV KNLRVC+DCH ATK+ISKI +REI+VRD RFH FK G
Sbjct: 829 SEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEG 888
Query: 640 ECSCGDFW 647
CSCGD+W
Sbjct: 889 TCSCGDYW 896
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 144/483 (29%), Positives = 232/483 (48%), Gaps = 65/483 (13%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSS---RRCVDLG 61
D VSWN I+ A++ + M + + LS T ++ + S+ + LG
Sbjct: 158 DQVSWNSFIAALCRFEKWEQALEAFRAMQMENM-ELSSFTLVSVALACSNLGVMHGLRLG 216
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+Q+HG+ L+ G F + L+ MYAKLG
Sbjct: 217 KQLHGYSLRVG-DQKTFTNNALMAMYAKLGR----------------------------- 246
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
V++S+ LF D+D +SW TMI+ Q+ EA+ FR M LEG+ +D T SVL
Sbjct: 247 --VDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVL 304
Query: 182 TACGGLLALEEGKQIHAFIIR-NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
AC L L+ GK+IHA+++R ND +N FVGSALVDMYC C+ ++ VF + + +
Sbjct: 305 PACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRI 364
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQR-NGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
W AM+ GY +NG E+A+ +F M + G+ P+ T+ SV+ +C + + HG
Sbjct: 365 ELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHG 424
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
++ G V NAL+ Y + G ++ S +F+ M VRD VSW +++GY G+ +
Sbjct: 425 YAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSN 484
Query: 360 TIDLFEKM-----------------LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
+ L +M KP+ +TL+ VL C+ + KG+
Sbjct: 485 ALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKE----- 539
Query: 403 VKEYGIRPIHDHY----TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ Y IR + + ++D+ ++ G L ++ N+MP + I W L+ +C +HG
Sbjct: 540 IHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMP-NKNVITWNVLIMACGMHG 598
Query: 459 NVE 461
E
Sbjct: 599 KGE 601
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 207/464 (44%), Gaps = 43/464 (9%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P SW + +A+ Y M G F +L S + + G
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSG-ARPDNFAFPAVLKAVSGLQDLKTG 111
Query: 62 RQIHGHILKFGFGSY-VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
QIH +KFG+GS V V + LV+MY K G I D + FD +
Sbjct: 112 EQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRI----------------- 154
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
D+D +SW + I L + +A++ FR M++E + + FT SV
Sbjct: 155 --------------TDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSV 200
Query: 181 LTAC---GGLLALEEGKQIHAFIIR-NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
AC G + L GKQ+H + +R D K F +AL+ MY K + ++++F +
Sbjct: 201 ALACSNLGVMHGLRLGKQLHGYSLRVGDQK--TFTNNALMAMYAKLGRVDDSKALFESFV 258
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
+++VSW M+ + Q+ EA+ F M G+E D T+ SV+ +C++L L+ G +
Sbjct: 259 DRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKE 318
Query: 297 FHGRSLVTG-LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
H L LI V +ALV Y C +E R+F+ + R W A++SGYA+ G
Sbjct: 319 IHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNG 378
Query: 356 KANETIDLFEKMLS-HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
+ + LF +M+ GL P+ T+ V+ AC VK G +
Sbjct: 379 LDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVK-LGFKEDRYV 437
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
++D+ SR G+++ +++ + M D + W T+++ + G
Sbjct: 438 QNALMDMYSRMGKMDISETIFDSMEV-RDRVSWNTMITGYVLSG 480
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 26/222 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLK----------------DGLGNLSRIT 44
M D VSWN +I+G+ G ++A+ + + M + G + IT
Sbjct: 461 MEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAIT 520
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
T+L ++ + G++IH + ++ S + VGS LVDMYAK G + ++R F+E+P
Sbjct: 521 LMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMP 580
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGM---------KDKDSISWTTMITGLMQNGLE 155
KN++ +N +I G EE+ LF+ M + +++ T+ +GL
Sbjct: 581 NKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLI 640
Query: 156 REAIDLFREMRLE-GLAMDQFTFGSVLTACGGLLALEEGKQI 196
E ++LF M+ + G+ + V+ G LEE ++
Sbjct: 641 SEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYEL 682
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 263/687 (38%), Positives = 387/687 (56%), Gaps = 76/687 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D +W +LIS HG +A++ YN + + + +L++S ++ C L
Sbjct: 37 IPQPDLPTWTILISALTKHGRSLEAIQYYN-----DFRHKNCVEPDKLLLLSVAKACASL 91
Query: 61 -----GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
+++H ++FGF S V +G+ L+DMY K
Sbjct: 92 RDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRC----------------------- 128
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
E +R +F GM +D ISWT+M + + GL REA+ FR+M L G +
Sbjct: 129 --------SEGARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSV 180
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
T S+L AC L L+ G+++H F++RN NVFV SALV+MY C SI+ A+ VF +M
Sbjct: 181 TVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSM 240
Query: 236 AWKNVVSWTAMLVGY-----------------------------------GQNGCSEEAV 260
+ ++ VSW ++ Y QNG +E+A+
Sbjct: 241 SRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKAL 300
Query: 261 KIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFY 320
++ MQ +G +P+ T+ SV+ +C NL SL G Q HG +T + ALV Y
Sbjct: 301 EVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMY 360
Query: 321 GKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLI 380
KCG++E S R+F+ M RD VSW ++ + G E + LF +M+ G++P+ VT
Sbjct: 361 AKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFT 420
Query: 381 GVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF 440
GVLS CS + LV++G F+ M +++ + P DH++CM+D+LSRAGRLEEA FI KMP
Sbjct: 421 GVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPI 480
Query: 441 PPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQL 500
P A W LL CR++ NVE+G+ AA L E++ NP +YVLLS+I S W S+
Sbjct: 481 EPTAGAWGALLGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASET 540
Query: 501 RRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDM 560
R+ MR++GV K+PGCSWI+ ++RVH F D S+ SD+IY L+ + KM GY+P+
Sbjct: 541 RKLMRDRGVTKNPGCSWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNT 600
Query: 561 SSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKI 620
VL DV+ EK ++L +HSEKLA+AFG+L + IRV KNLR+C DCHNA K+++KI
Sbjct: 601 DFVLQDVDQEEKEEVLCNHSEKLAVAFGVLNLNGESSIRVFKNLRICGDCHNAIKFMAKI 660
Query: 621 TQREILVRDAVRFHLFKNGECSCGDFW 647
+I+VRD++RFH F++G CSC DFW
Sbjct: 661 VGVKIIVRDSLRFHHFRDGLCSCQDFW 687
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 181/376 (48%), Gaps = 38/376 (10%)
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG-LAMDQFTFGSV 180
G ++ +R LF + D +WT +I+ L ++G EAI + + R + + D+ SV
Sbjct: 25 GDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPDKLLLLSV 84
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
AC L + K++H IR +V +G+AL+DMY KC+ + A VF M +++V
Sbjct: 85 AKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFRDV 144
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SWT+M Y G EA+ F M NG P+ T+ S++ +C +L L+ G + HG
Sbjct: 145 ISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGF 204
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY--------- 351
+ G+ + VS+ALV Y C +I + +F+ M+ RD VSW L++ Y
Sbjct: 205 VVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKG 264
Query: 352 --------------------------AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+ G+ + +++ +M + G KP+++T+ VL A
Sbjct: 265 LSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPA 324
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
C+ + G+ + + + + + T ++ + ++ G LE ++ + M D +
Sbjct: 325 CTNLESLRGGKQIHGYIFRHWFFQDL-TTTTALVFMYAKCGDLELSRRVFSMMT-KRDTV 382
Query: 446 GWATLLSSCRIHGNVE 461
W T++ + +HGN E
Sbjct: 383 SWNTMIIATSMHGNGE 398
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 5/173 (2%)
Query: 316 LVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML-SHGLKP 374
+ Y G+++ + LF+++ D +WT L+S K G++ E I + + ++P
Sbjct: 17 FIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEP 76
Query: 375 DEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSF 434
D++ L+ V AC+ V + E ++ +G +ID+ + E A+
Sbjct: 77 DKLLLLSVAKACASLRDVMNAKRVHEDAIR-FGFCSDVLLGNALIDMYGKCRCSEGARLV 135
Query: 435 INKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSI 487
MPF D I W T ++SC ++ + A + L+ P S V +SSI
Sbjct: 136 FEGMPF-RDVISW-TSMASCYVNCGLLREALGAFRKMGLNGERPNS-VTVSSI 185
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 255/650 (39%), Positives = 399/650 (61%), Gaps = 40/650 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D V+WN++I G+A+ G + ++++ M G+ LSR F T L + S +R ++
Sbjct: 266 MVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGV-KLSRTVFCTALKLCSQQRELNF 324
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+Q+H ++K G+ + + L+ Y+K
Sbjct: 325 TKQLHCGVVKNGYEFAQDIRTALMVTYSKCSS---------------------------- 356
Query: 121 RGLVEESRRLFRGMKDK--DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
V+E+ +LF M D + ++WT MI G +QN +A+DLF +M EG+ + FT+
Sbjct: 357 ---VDEAFKLF-SMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYS 412
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
+VL L Q+HA II+ ++ V +AL+D Y K ++ + VF ++ K
Sbjct: 413 TVLAGKPSSLL----SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAK 468
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN-LASLEEGTQF 297
++V+W+AML G Q SE+A+++F + + G++P+++T SVI++C++ A++E G Q
Sbjct: 469 DIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQI 528
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H ++ +G + + VS+AL+T Y K GNIE + ++F RD VSW ++++GY + G A
Sbjct: 529 HATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDA 588
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
+ +++F+ M + GL D+VT IGVL+AC+ AGLVE+G YF IM+K+Y I +HY+C
Sbjct: 589 KKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSC 648
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
M+D+ SRAG ++A IN MPFP W TLL++CR+H N+E+GK AAE L+ L P +
Sbjct: 649 MVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPND 708
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
YVLLS+I+A G W+ + +R+ M E+ V+K+ GCSWI+ K+R+ F A D S P+S
Sbjct: 709 AVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFS 768
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
D +YA+LE+L+ K+ GY PD + V HDVE K +L+ HSE+LAIA+GL+ +PPG P
Sbjct: 769 DLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAP 828
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
I++ KNLR+C DCHN + IS I +R ++VRD+ RFH FK G CSCG +W
Sbjct: 829 IQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 132/463 (28%), Positives = 231/463 (49%), Gaps = 40/463 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + VSW L+SG+A +G ++ + + N M +G+ N + TF+T+L + ++
Sbjct: 165 MGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGV-NPNGFTFATVLGALADESIIEG 223
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+H I+K GF FV + L+ MY K ++ DA+ FD
Sbjct: 224 GVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFD------------------- 264
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
M +DS++W MI G G E +F MRL G+ + + F +
Sbjct: 265 ------------SMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTA 312
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM-AWKN 239
L C L KQ+H +++N ++ + +AL+ Y KC S+ A +F A N
Sbjct: 313 LKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHN 372
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VV+WTAM+ G+ QN +E+AV +FC M R G+ P+ FT +V++ +SL +Q H
Sbjct: 373 VVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLA--GKPSSLL--SQLHA 428
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ + +V+ AL+ Y K GN+ +S R+F + +D V+W+A+++G A+ + +
Sbjct: 429 QIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEK 488
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSAC-SRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
+++F +++ G+KP+E T V++AC S A VE G+ VK G + +
Sbjct: 489 AMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKS-GKSNALCVSSAL 547
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+ + S+ G +E A+ + D + W ++++ HG+ +
Sbjct: 548 LTMYSKKGNIESAEKVFTRQE-ERDIVSWNSMITGYGQHGDAK 589
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 131/513 (25%), Positives = 229/513 (44%), Gaps = 47/513 (9%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P D +N L+ + + +A+ ++ + GLG + +T S L + +G
Sbjct: 65 PLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLG-VDGLTLSCALKVCGVLFDQVVG 123
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
RQ+H LK GF V VG+ LVDMY K D + FDE+ KN+V + ++++G R
Sbjct: 124 RQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYAR- 182
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
NGL E I L +M++EG+ + FTF +VL
Sbjct: 183 ------------------------------NGLNDEVIHLINQMQMEGVNPNGFTFATVL 212
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
A +E G Q+HA I++N + FV +AL+ MY K + + AE+VF +M ++ V
Sbjct: 213 GALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSV 272
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
+W M+ GY G E ++F M+ G++ + + C+ L Q H
Sbjct: 273 TWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGV 332
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN-VRDEVSWTALVSGYAKFGKANET 360
+ G + AL+ Y KC +++++ +LF+ + + V+WTA++ G+ + +
Sbjct: 333 VKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKA 392
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+DLF +M G++P+ T VL+ + L + ++K Y + T ++D
Sbjct: 393 VDLFCQMSREGVRPNHFTYSTVLAGKPSSLLSQLHAQ----IIKAY-YEKVPSVATALLD 447
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL--DPYNP 478
+ G + E+ +P D + W+ +L+ + A E ++L + P
Sbjct: 448 AYVKTGNVVESARVFYSIP-AKDIVAWSAMLTGL---AQTRDSEKAMEVFIQLVKEGVKP 503
Query: 479 ASYVLLSSIYA---SKGKWDHVSQLRRTMREKG 508
Y S I A S +H Q+ T + G
Sbjct: 504 NEYTFSSVINACSSSAATVEHGKQIHATAVKSG 536
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 158/325 (48%), Gaps = 1/325 (0%)
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+ +LF KD + ++ +N +REA+ LF+++ GL +D T L CG
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L G+Q+H +++ ++V VG++LVDMY K + + +F M KNVVSWT++
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
L GY +NG ++E + + MQ G+ P+ FT +V+ + A+ + +E G Q H + G
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
V NAL+ Y K + D+ +F+ M VRD V+W ++ GYA G E +F +
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHR 296
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M G+K L CS+ + + +VK G D T ++ S+
Sbjct: 297 MRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKN-GYEFAQDIRTALMVTYSKCS 355
Query: 427 RLEEAKSFINKMPFPPDAIGWATLL 451
++EA + + + W ++
Sbjct: 356 SVDEAFKLFSMADAAHNVVTWTAMI 380
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 94/179 (52%)
Query: 226 KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
+YA +F K++ + +L + +N EA+ +F ++ +G+ D TL + C
Sbjct: 55 RYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVC 114
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
L G Q H +SL +G + ++V +LV Y K + ED +F+EM +++ VSWT
Sbjct: 115 GVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWT 174
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
+L+SGYA+ G +E I L +M G+ P+ T VL A + ++E G ++VK
Sbjct: 175 SLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVK 233
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 264/648 (40%), Positives = 389/648 (60%), Gaps = 36/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSWN L++G +G +A+++++ + + L+ T+ST++ + ++ + + L
Sbjct: 218 METRDMVSWNTLMAGLVLNGRDLEALQLFHDS-RSSITMLTESTYSTVINLCANLKHLGL 276
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
RQ+H +LK GF SY V + L+D Y K G + A F LL
Sbjct: 277 ARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVF-----------------LLM 319
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G ++ +SWT MI G +QNG A LF MR +G+A + T+ ++
Sbjct: 320 SG-------------SQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTI 366
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LT QIHA +I+ +++ VG+AL+ Y K S + A S+F+ + K+V
Sbjct: 367 LTVSEASFP----PQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDV 422
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS-LEEGTQFHG 299
VSW+AML Y Q G A F M +G++P++FT+ S I +CA+ A+ ++ G QFH
Sbjct: 423 VSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHA 482
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
S+ + VS+ALV+ Y + G+IE++ +F RD +SW +++SGYA+ G + +
Sbjct: 483 ISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQK 542
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+D+F +M G+ D +T + V+ C+ AGLVE+G+ YF++MV++YGI P DHY CM+
Sbjct: 543 ALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMV 602
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+ SRAG+L+E S I MPFP W LL +CR+H NVE+GK AAE LL L+P + A
Sbjct: 603 DLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGACRVHKNVELGKLAAEKLLSLEPLDSA 662
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+YVLLS+IY++ GKW ++R+ M K VRK+ GCSWI+ K++VH F A D S P S+Q
Sbjct: 663 TYVLLSNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQ 722
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IYA+L + K+ +EGY PD S V HDV +K ML HSE+LA+AFGL+ PP P+
Sbjct: 723 IYAKLRAMTAKLKQEGYCPDTSFVPHDVAEDQKEAMLAMHSERLALAFGLIATPPAAPLH 782
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ KNLRV D H K +S+I REI++RD RFH FK+G CSCGDFW
Sbjct: 783 IFKNLRVSGDGHTVMKMVSEIEDREIVMRDCCRFHHFKSGVCSCGDFW 830
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/457 (29%), Positives = 231/457 (50%), Gaps = 46/457 (10%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V+W L++G+ G + D + ++ M +G+ + TFS++L M +S+ VDLG+ +H
Sbjct: 123 VTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWP-NPFTFSSVLSMVASQGMVDLGQHVHA 181
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+KFG S VFV + L++MYAK GL+ +A+ F + +++V +NT++ GL+
Sbjct: 182 QSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVL------ 235
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
NG + EA+ LF + R + + T+ +V+ C
Sbjct: 236 -------------------------NGRDLEALQLFHDSRSSITMLTESTYSTVINLCAN 270
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW-KNVVSWTA 245
L L +Q+H+ ++++ V +AL+D Y K + A VF M+ +NVVSWTA
Sbjct: 271 LKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTA 330
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
M+ G QNG A +F M+ +G+ P+D T ++++ ++ Q H + + T
Sbjct: 331 MIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILT----VSEASFPPQIHAQVIKTN 386
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
TV AL+ Y K + E++ +F ++ +D VSW+A+++ YA+ G N + F
Sbjct: 387 YECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFI 446
Query: 366 KMLSHGLKPDEVTLIGVLSAC-SRAGLVEKGRHYFEIMVKEYGIRPIHDHY---TCMIDI 421
KM HGLKP+E T+ + AC S A V+ GR + I +K HD + ++ +
Sbjct: 447 KMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHR----CHDALCVSSALVSM 502
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+R G +E A+ + D + W ++LS HG
Sbjct: 503 YARKGSIENAQCVFERQT-DRDLLSWNSMLSGYAQHG 538
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 163/335 (48%), Gaps = 6/335 (1%)
Query: 132 RGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAMDQFTFGSVLTACGGLLAL 190
R K WT + Q G +A+D F + R +G + ++ CG +
Sbjct: 13 RSTKFPTRTPWTMPFSTTWQ-GFVHQALDHFLDAHRRQGRCVGGGALLGIIKICGSVPDR 71
Query: 191 EEGKQIHAFIIR--NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
GKQ+HA +R +DH D + VG++LVDMY S+ VF M +NVV+WT++L
Sbjct: 72 VLGKQLHALCVRCGHDHGD-IRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLT 130
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
GY Q G + + +F M+ G+ P+ FT SV+S A+ ++ G H +S+ G S
Sbjct: 131 GYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCS 190
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
+ V N+L+ Y KCG +E++ +F M RD VSW L++G G+ E + LF
Sbjct: 191 TVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSR 250
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
S E T V++ C+ + R ++K +G + T ++D ++AG+L
Sbjct: 251 SSITMLTESTYSTVINLCANLKHLGLARQLHSSVLK-HGFHSYGNVMTALMDAYNKAGQL 309
Query: 429 EEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
++A M + + W ++ C +G++ +
Sbjct: 310 DKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLA 344
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 203/432 (46%), Gaps = 40/432 (9%)
Query: 60 LGRQIHGHILKFGFG-SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
LG+Q+H ++ G + VG+ LVDMY + D
Sbjct: 73 LGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDG---------------------- 110
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
R++F GM ++ ++WT+++TG +Q G+ + + LF MR EG+ + FTF
Sbjct: 111 ---------RKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFS 161
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
SVL+ ++ G+ +HA I+ VFV ++L++MY KC ++ A VF M +
Sbjct: 162 SVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETR 221
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
++VSW ++ G NG EA+++F + + + + T +VI+ CANL L Q H
Sbjct: 222 DMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLH 281
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN-VRDEVSWTALVSGYAKFGKA 357
L G S+ V AL+ Y K G ++ + +F M+ ++ VSWTA++ G + G
Sbjct: 282 SSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDI 341
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
LF +M G+ P+++T +L+ S A + + +++ Y P T
Sbjct: 342 PLAAALFSRMREDGVAPNDLTYSTILTV-SEASF--PPQIHAQVIKTNYECTPTVG--TA 396
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
++ S+ EEA S I KM D + W+ +L+ G+ G A + +
Sbjct: 397 LMVSYSKLCSTEEALS-IFKMIDQKDVVSWSAMLTCYAQAGDCN-GATNAFIKMTMHGLK 454
Query: 478 PASYVLLSSIYA 489
P + + S+I A
Sbjct: 455 PNEFTISSAIDA 466
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 260/647 (40%), Positives = 383/647 (59%), Gaps = 33/647 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN +I+G + +G A+++ L ++D IT T+L ++ + +
Sbjct: 208 MPERDLVSWNTIIAGFSQNGFAKKALELV-LRMQDEGQRPDSITLVTVLPAAADVGLLMV 266
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ IHG+ ++ GF V + + L DMY+K G
Sbjct: 267 GKSIHGYAIRAGFAKLVNISTALADMYSKCGS---------------------------- 298
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
VE +R +F GM K +SW +M+ G +QNG +AI +F +M EG+ T
Sbjct: 299 ---VETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEA 355
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L LE GK +H F+ + + ++ V ++L+ MY KCK + A +F + +
Sbjct: 356 LHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTH 415
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW AM++GY QNG EA+ F M+ G++PD FT+ SVI + A L+ HG
Sbjct: 416 VSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGL 475
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ + L I V+ ALV Y KCG I + +LF+ ++ R ++W A++ GY G
Sbjct: 476 IIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAA 535
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+DLF+KM ++P+++T + V+SACS +GLV++G +F+ M ++YG+ P DHY M+D
Sbjct: 536 LDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVD 595
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAGR++EA FI MP P + +L +C+IH N+E+G+ AA+ L EL+P
Sbjct: 596 LLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGY 655
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
+VLL++IYAS KW V+++R+TM +KG++K PGCS ++ ++ VH F + + P S +I
Sbjct: 656 HVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRI 715
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
YA LE+L ++ GYVPD + +L DVE + ++LN HSEKLAIAFGLL PG I V
Sbjct: 716 YAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHV 774
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCHNATKYIS +T REI+VRD RFH FKNG CSCGD+W
Sbjct: 775 RKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 134/450 (29%), Positives = 222/450 (49%), Gaps = 34/450 (7%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
++ ++ G+A + S+ A+ M D + + F+ +L + + G++IHG +
Sbjct: 115 YHTMLKGYAKNSSLETALAFLCRMRYDDVKPVV-YNFTYLLKVCGDNADLKRGKEIHGQL 173
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+ F + VF + +V+MYAK I DA + FD +PE+
Sbjct: 174 ITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPER---------------------- 211
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
D +SW T+I G QNG ++A++L M+ EG D T +VL A +
Sbjct: 212 ---------DLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVG 262
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
L GK IH + IR V + +AL DMY KC S++ A +F M K VVSW +M+
Sbjct: 263 LLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMD 322
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
GY QNG E+A+ +F M GI+P T+ + +CA+L LE G H L S
Sbjct: 323 GYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGS 382
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
I+V N+L++ Y KC ++ + +FN +N R VSW A++ GYA+ G+ +E ++ F +M
Sbjct: 383 DISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMK 442
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
S G+KPD T++ V+ A + + + ++++ + I T ++D+ S+ G +
Sbjct: 443 SLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFV-TTALVDMYSKCGAI 501
Query: 429 EEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
A+ + M I W ++ HG
Sbjct: 502 HMARKLFD-MISDRHVITWNAMIDGYGTHG 530
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 173/330 (52%), Gaps = 2/330 (0%)
Query: 110 MYNTMITGLLRR-GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE 168
++ T + L + G + E+ R+F + DK + TM+ G +N A+ MR +
Sbjct: 82 LFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYD 141
Query: 169 GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYA 228
+ + F +L CG L+ GK+IH +I N NVF + +V+MY KC+ I A
Sbjct: 142 DVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDA 201
Query: 229 ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL 288
+F M +++VSW ++ G+ QNG +++A+++ MQ G PD TL +V+ + A++
Sbjct: 202 YKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADV 261
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
L G HG ++ G + +S AL Y KCG++E + +F+ M+ + VSW +++
Sbjct: 262 GLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMM 321
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
GY + G+ + I +FEKML G+ P VT++ L AC+ G +E+G+ + V + +
Sbjct: 322 DGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGK-FVHKFVDQLNL 380
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
+I + S+ R++ A N +
Sbjct: 381 GSDISVMNSLISMYSKCKRVDIASDIFNNL 410
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 156/321 (48%), Gaps = 12/321 (3%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
+++E QI +I+N + + LV ++ K SI A VF + K + ML
Sbjct: 61 SMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLK 120
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
GY +N E A+ C M+ + ++P + ++ C + A L+ G + HG+ + +
Sbjct: 121 GYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAA 180
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
+ +V Y KC I+D++++F+ M RD VSW +++G+++ G A + ++L +M
Sbjct: 181 NVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQ 240
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
G +PD +TL+ VL A + GL+ G+ ++ G + + T + D+ S+ G +
Sbjct: 241 DEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRA-GFAKLVNISTALADMYSKCGSV 299
Query: 429 EEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIY 488
E A+ + M + W +++ +G E E +LE + +P ++ +++
Sbjct: 300 ETARLIFDGMD-QKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLE-EGIDPTGVTIMEALH 357
Query: 489 A-------SKGKWDH--VSQL 500
A +GK+ H V QL
Sbjct: 358 ACADLGDLERGKFVHKFVDQL 378
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 255/672 (37%), Positives = 405/672 (60%), Gaps = 31/672 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLML-----KDGLGNLSRITFSTMLIMSSSRRCVD 59
D +SWN +++ H + A+ +++ M K I+ +L +S + +
Sbjct: 217 DVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALP 276
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
++IH + ++ G + FV + L+D YAK G + DA F+ + K++V +N M+TG
Sbjct: 277 QTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYT 336
Query: 120 RRGLVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
+ G + LF+ M+ + D I+W+ +I G Q G +EA+D F++M L G +
Sbjct: 337 QSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSV 396
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRN------------DHKDNVFVGSALVDMYCKCK 223
T S+L+AC L AL +G + HA+ ++ +++ V +AL+DMY KC+
Sbjct: 397 TIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCR 456
Query: 224 SIKYAESVFRTMAWK--NVVSWTAMLVGYGQNGCSEEAVKIFCNM--QRNGIEPDDFTLG 279
S K A ++F ++ + NVV+WT M+ GY Q G S +A+K+F M + + P+ +T+
Sbjct: 457 SFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTIS 516
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGLISFIT----VSNALVTFYGKCGNIEDSHRLFNE 335
++ +CA+L+SL G Q H + VT + + V+N L+ Y KCG+++ + +F+
Sbjct: 517 CILMACAHLSSLRMGKQIH--AYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDS 574
Query: 336 MNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG 395
M R+EVSWT+++SGY G+ E +D+F+KM G PD+++ + +L ACS +G+V++G
Sbjct: 575 MPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQG 634
Query: 396 RHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCR 455
YF+IM +YG+ HY C+ID+L+R+GRL++A I +MP P A W LLS+CR
Sbjct: 635 LDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACR 694
Query: 456 IHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGC 515
+H NVE+ ++A L+ + N SY L+S+IYA+ +W V+++R+ M++ G++K PGC
Sbjct: 695 VHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGIKKRPGC 754
Query: 516 SWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKM 575
SW++ K F D S P S +IY+ LE+L ++ GYVP+ + LHDV+ EK +
Sbjct: 755 SWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDVDDEEKNNL 814
Query: 576 LNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHL 635
L HSEKLA+A+GLL PG PIR+ KNLRVC DCH+A YISKI EI+VRD+ RFH
Sbjct: 815 LTEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFIYISKIVDHEIIVRDSSRFHH 874
Query: 636 FKNGECSCGDFW 647
FKNG CSCG +W
Sbjct: 875 FKNGSCSCGGYW 886
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 145/511 (28%), Positives = 237/511 (46%), Gaps = 88/511 (17%)
Query: 6 GVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIH 65
V WNLL+ H G ++ A+ V ML+ G T L G H
Sbjct: 114 AVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGT-KPDHFTLPYALKACGELPSYRSGSAFH 172
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
G I GF S VFV + LV MY++ G + DA FDE+ K I
Sbjct: 173 GLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGI----------------- 215
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM------RLEGLAMDQFTFGS 179
D ISW +++ ++ R A+DLF EM + D + +
Sbjct: 216 -----------DDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVN 264
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L AC L AL + K+IH++ IRN + FV +AL+D Y KC S+K A +VF M +K+
Sbjct: 265 ILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKD 324
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGI---------------------------- 271
VVSW AM+ GY Q+G A ++F NM++ I
Sbjct: 325 VVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQ 384
Query: 272 -------EPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF------------ITV 312
EP+ T+ S++S+CA+L +L +G + H SL L+S + V
Sbjct: 385 QMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVV 444
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDE--VSWTALVSGYAKFGKANETIDLFEKMLS- 369
NAL+ Y KC + + + +FN + R+ V+WT ++ GYA++G +N+ + LF +M+S
Sbjct: 445 HNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISK 504
Query: 370 -HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR-PIHDHYTCMIDILSRAGR 427
+ + P+ T+ +L AC+ + G+ + + + ++ C+ID+ S+ G
Sbjct: 505 PYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGD 564
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
++ A++ + MP + + W +++S +HG
Sbjct: 565 VDTARNVFDSMP-KRNEVSWTSMMSGYGMHG 594
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 193/443 (43%), Gaps = 74/443 (16%)
Query: 56 RCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
R V+ RQIH I+ +G SY P + L LP + V ++
Sbjct: 42 RSVNTVRQIHQKIIAYGLLSY-----PASLLSVSL----------PPLPSHSYVSPKSLG 86
Query: 116 TGL----LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLA 171
TG+ L G ++ + + ++ W ++ ++ G AI + M G
Sbjct: 87 TGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTK 146
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
D FT L ACG L + G H I N + NVFV +ALV MY + S++ A V
Sbjct: 147 PDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLV 206
Query: 232 FRTMAWK---NVVSWTAMLVGYGQNGCSEEAVKIFCNM------QRNGIEPDDFTLGSVI 282
F + K +V+SW +++ + + A+ +F M + D ++ +++
Sbjct: 207 FDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNIL 266
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
+CA+L +L + + H ++ G + V NAL+ Y KCG+++D+ +FN M +D V
Sbjct: 267 PACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVV 326
Query: 343 SWTALVSGYA---KFGKA--------------------------------NETIDLFEKM 367
SW A+V+GY KFG A E +D F++M
Sbjct: 327 SWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQM 386
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH-----------YT 416
+ +G +P+ VT+I +LSAC+ G + +G +K+ + +D +
Sbjct: 387 ILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHN 446
Query: 417 CMIDILSRAGRLEEAKSFINKMP 439
+ID+ S+ + A++ N +P
Sbjct: 447 ALIDMYSKCRSFKAARTIFNSIP 469
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 195/448 (43%), Gaps = 96/448 (21%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKD-------------------GLGNLS 41
M F D VSWN +++G+ G A +++ M K+ G G +
Sbjct: 320 MEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEA 379
Query: 42 RITFSTMLIMSSSRRCVDL---------------GRQIHGHILKFGFGSY---------- 76
TF M++ S V + G + H + LK S
Sbjct: 380 LDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDG 439
Query: 77 --VFVGSPLVDMYAKLGLIYDAKRGFDELP--EKNIVMYNTMITGLLRRGLVEESRRLFR 132
+ V + L+DMY+K A+ F+ +P E+N+V + MI
Sbjct: 440 EDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMI----------------- 482
Query: 133 GMKDKDSISWTTMITGLMQNGLEREAIDLFREM--RLEGLAMDQFTFGSVLTACGGLLAL 190
G Q G +A+ LF EM + +A + +T +L AC L +L
Sbjct: 483 --------------GGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSL 528
Query: 191 EEGKQIHAFIIRNDHKDN--VFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
GKQIHA++ R+ ++ FV + L+DMY KC + A +VF +M +N VSWT+M+
Sbjct: 529 RMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMS 588
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG--RSLVTGL 306
GYG +G +EA+ IF MQ+ G PDD + ++ +C++ +++G + RS G+
Sbjct: 589 GYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDY-GV 647
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKANETIDLFE 365
I+ ++ + G ++ + + EM + + W AL+S + + ++L E
Sbjct: 648 IASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSA----CRVHSNVELAE 703
Query: 366 ----KMLSHGLKPD-EVTLIGVLSACSR 388
K++S + D TLI + A +R
Sbjct: 704 YALNKLVSMKAENDGSYTLISNIYATAR 731
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 129/270 (47%), Gaps = 24/270 (8%)
Query: 211 VGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
+G+ +V Y C + A SV + V W ++ + + G + A+ + C M R G
Sbjct: 85 LGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAG 144
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
+PD FTL + +C L S G+ FHG G S + V NALV Y + G++ED+
Sbjct: 145 TKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDAS 204
Query: 331 RLFNEMN---VRDEVSWTALVSGYAKFGKANETIDLFEKMLS------HGLKPDEVTLIG 381
+F+E+ + D +SW ++V+ + K +DLF +M + + D ++++
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVN 264
Query: 382 VLSACSRAGLVEKGRHYFEIMVKEYGIR--PIHDHYTC--MIDILSRAGRLEEAKSFINK 437
+L AC+ + + + + Y IR D + C +ID ++ G +++A + N
Sbjct: 265 ILPACASLKALPQTKE-----IHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNV 319
Query: 438 MPFPPDAIGWATLLSSCRIHGNVEIGKWAA 467
M F D + W +++ G + GK+ A
Sbjct: 320 MEF-KDVVSWNAMVT-----GYTQSGKFGA 343
>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 687
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 257/647 (39%), Positives = 383/647 (59%), Gaps = 35/647 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VS NLL+SG+AS G DA+ +L+ L+ S+ + ++ R D+
Sbjct: 76 MPSRNPVSGNLLMSGYASSGRHRDALA----LLRVADFGLNEYVLSSAVAATAHVRSYDM 131
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ HG+ +K G + +V S ++ MY + + +A + FD + N+ +N+MI G L
Sbjct: 132 GRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLD 191
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
RG ++ S + R M ++ W D ++ +V
Sbjct: 192 RGQMDGSTSIVRSMV-RNVGQW------------------------------DHVSYVAV 220
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C + G Q+H ++ + NV+VGSALVDMY KC A VF + KN+
Sbjct: 221 LGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNI 280
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWTA++ Y QN E+A+++F +M+ G+ P++FT ++SCA LA+L+ G
Sbjct: 281 VSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGAC 340
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ TG + V NAL+ Y K G++ED+ R+F M RD VSW +++ GYA G+A E
Sbjct: 341 TMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREA 400
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++ F ML P VT IGVLSAC++ GLV++G +Y IM+KE G++P +HYTCM+
Sbjct: 401 MEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVG 460
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L R GRL+EA+ FI D + W +LLSSC+++ N +G AE + +L P + +
Sbjct: 461 LLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQLKPKDVGT 520
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS++YA +WD V ++RR MRE GVRK+PG SWI+ S VH+F+++D PY +QI
Sbjct: 521 YVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSEVHVFTSEDKKHPYMEQI 580
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
+L++L K+ GYVP+++ LHDVE +K + L +HSEKLA+AFGL+ P G IR+
Sbjct: 581 TKKLQELIDKIKVIGYVPNIAVALHDVEDEQKEEHLMYHSEKLALAFGLIRTPKGEAIRI 640
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+KN+R+C DCH A K IS T R I+VRD VRFH ++G CSC D+W
Sbjct: 641 MKNVRICDDCHVAIKLISLATGRRIVVRDTVRFHCIEDGVCSCDDYW 687
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 254/644 (39%), Positives = 383/644 (59%), Gaps = 33/644 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V++N L++G+++ G +A++++ + G+ S TF+ +L + G+Q+
Sbjct: 205 DTVTFNSLMTGYSNEGLNEEAIELFLELHNSGI-KPSDFTFAALLSAAVGLDDTKFGQQV 263
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG +LK F VFVG+ L+D Y+K V
Sbjct: 264 HGFVLKTNFVWNVFVGNALLDYYSK-------------------------------HDQV 292
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+E +LF M + D IS+ +IT NG +E+ DLFR+++ QF F ++L+
Sbjct: 293 DEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIA 352
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L L G+QIH I V +ALVDMY KC K A+ +F +A K+ V WT
Sbjct: 353 TSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWT 412
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
AM+ Y Q G EE + +F +M+R G+ D T S++ +CANLAS+ G Q H + +
Sbjct: 413 AMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRS 472
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G +S + +AL+ Y KCG + D+ + F EM R+ VSW AL+S YA+ G + T++ F
Sbjct: 473 GFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSF 532
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
++M+ G KPD V+ + VLSACS G VE+ +F M + Y + P +HYT M+D+L R
Sbjct: 533 QQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCR 592
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL-DPYNPASYVL 483
GR +EA+ + +MPF P I W+++L+SCRIH N E+ K AA+ L + D + A Y+
Sbjct: 593 NGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYIN 652
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
+S+IYA G+WD+V+++++ MR++GVRK P SW++ K + H+FSA+D S P +I +
Sbjct: 653 MSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRK 712
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
+ L+++M K+GY PD + LHDV+ KI+ L +HSE+ AIAF L+ P G PI V+KN
Sbjct: 713 INALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKN 772
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LR C+DCH A K IS+I +REI+VRD+ RFH FK+G CSCGD+W
Sbjct: 773 LRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 135/534 (25%), Positives = 238/534 (44%), Gaps = 67/534 (12%)
Query: 6 GVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIH 65
VSW +LI G+ +A ++Y M + G+ +T T+L ++ QIH
Sbjct: 105 AVSWTILIGGYLQSNQSKEAFRLYADMRRGGI-EPDYVTLVTLLSGFGELETKNVIVQIH 163
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
H++K G+ + V + LVD Y K +Y A +
Sbjct: 164 THVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQ--------------------------- 196
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
LF+ M +KD++++ +++TG GL EAI+LF E+ G+ FTF ++L+A
Sbjct: 197 ----LFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAV 252
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
GL + G+Q+H F+++ + NVFVG+AL+D Y K + +F M + +S+
Sbjct: 253 GLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNV 312
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
++ Y NG +E+ +F +Q + F +++S + +L G Q H +++ G
Sbjct: 313 VITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVG 372
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
V NALV Y KC +++ ++F+ + + V WTA++S Y + GK E I++F
Sbjct: 373 ANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFS 432
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE------YGIRPIHDHYT--- 416
M G+ D+ T +L AC+ + GR ++++ Y + D Y
Sbjct: 433 DMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCG 492
Query: 417 CMIDILSRAGRLEEAKSF------------------INKMP------FPPDAIGWATLLS 452
CM D + G + E S +N + PD++ + ++LS
Sbjct: 493 CMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLS 552
Query: 453 SCRIHGNVEIGKWAAESLLELDPYNPAS--YVLLSSIYASKGKWDHVSQLRRTM 504
+C G VE W S+ ++ P Y + + G++D +L M
Sbjct: 553 ACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEM 606
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 144/540 (26%), Positives = 255/540 (47%), Gaps = 60/540 (11%)
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
I HI+K GF + V+ + + G + A + FD++P KN + N MI+G L+ G
Sbjct: 30 IDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGK 89
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
+ ++R LF GM ++ ++SWT +I G +Q+ +EA L+ +MR G+ D T ++L+
Sbjct: 90 LSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSG 149
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
G L QIH +I+ ++ N+ V ++LVD YCK + A +F+ M K+ V++
Sbjct: 150 FGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTF 209
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
+++ GY G +EEA+++F + +GI+P DFT +++S+ L + G Q HG L
Sbjct: 210 NSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLK 269
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
T + + V NAL+ +Y K +++ +LF EM D +S+ +++ YA G+ E+ DL
Sbjct: 270 TNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDL 329
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY----------FEIMVKEYGI----- 408
F K+ + +LS + + + GR FE V+ +
Sbjct: 330 FRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAK 389
Query: 409 -------RPIHDHYTC--------MIDILSRAGRLEEAKSFINKMP---FPPDAIGWATL 450
+ I D+ C MI + G+ EE + + M P D +A++
Sbjct: 390 CNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASI 449
Query: 451 LSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVR 510
L +C ++ +G+ L+ +S++Y+ S L T + G
Sbjct: 450 LRACANLASISLGRQLHSLLIRSG--------FMSNVYSG-------SALLDTYAKCGCM 494
Query: 511 KDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLN------RKMIKEGYVPDMSSVL 564
D S+ + R + W++ S YA+ ++ ++MI+ GY PD S L
Sbjct: 495 TDAIKSFGEMPERNSV----SWNALIS--AYAQNGNVDGTLNSFQQMIQSGYKPDSVSFL 548
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 176/354 (49%), Gaps = 38/354 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSR--ITFSTMLIMSSSRRCV 58
MP DG+S+N++I+ +A +G ++ ++L K R F+T+L +++S +
Sbjct: 302 MPELDGISYNVVITSYAWNGQFKES---FDLFRKLQFTRFDRRQFPFATLLSIATSSLNL 358
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
+GRQIH + G V + LVDMYAK +A++ FD + K+ V + MI+
Sbjct: 359 RMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAY 418
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+++G E E I++F +MR G+ DQ TF
Sbjct: 419 VQKGKHE-------------------------------EGINVFSDMRRTGVPADQATFA 447
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
S+L AC L ++ G+Q+H+ +IR+ NV+ GSAL+D Y KC + A F M +
Sbjct: 448 SILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPER 507
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT-QF 297
N VSW A++ Y QNG + + F M ++G +PD + SV+S+C++ +EE F
Sbjct: 508 NSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHF 567
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
+ + + + ++V + G +++ +L EM E+ W+++++
Sbjct: 568 NSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNS 621
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 260/650 (40%), Positives = 383/650 (58%), Gaps = 37/650 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VS+N++I+G+ +G +A+K++ + +++ S TF+ ML MS V
Sbjct: 204 MPTKDSVSFNVMITGYTKYGFREEALKLF-MQMRNMDFQPSGFTFAAMLGMSVGSEDVIF 262
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIHG +K + +FV + L+D Y+K I AK FDE+P
Sbjct: 263 GQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMP---------------- 306
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ--FTFG 178
+ D +S+ +ITG NG ++ DLF+ RL+G + D+ F F
Sbjct: 307 ---------------ELDGVSYNIIITGYAWNGQYEKSFDLFK--RLQGTSFDRKNFPFA 349
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
++L+ L L G+Q HA + V VG+ALVDMY KC+ + A +F +A++
Sbjct: 350 TMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYR 409
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
N V WTA++ Y Q G EEA+K+F M R + D T S + + ANLAS+ G Q H
Sbjct: 410 NSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLH 469
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
+ GL+S + + LV Y CG+++D+ +F EM R+ V W AL+S Y++ G A
Sbjct: 470 SSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAE 529
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
T F M+ GL PD V+ + VL+ACS GLVEK YF M + Y + P HY M
Sbjct: 530 ATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATM 589
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY-N 477
ID+L R+GR EA++ I++MPF PD + W+++L+SCRIH N ++ K AA+ L ++D +
Sbjct: 590 IDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRD 649
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
A+YV +S+IYA GKW++ +++++ MRE+GV+K SW++ RVH+F+A+D + P +
Sbjct: 650 AAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTANDRTHPQT 709
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
+QI ++ L M KEGY PD S L +V+ KI+ L +HSE+LAIAF L+ P G P
Sbjct: 710 EQIRRKINSLVELMDKEGYKPDTSCTLQNVDEEMKIESLKYHSERLAIAFALINTPEGSP 769
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
I ++KNLR C DCH A K ISKI REI VRD+ RFH F++G CSCGD+W
Sbjct: 770 IIIMKNLRACVDCHAAIKVISKIVGREITVRDSSRFHHFRDGSCSCGDYW 819
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 230/483 (47%), Gaps = 35/483 (7%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW ++I G++ + +A +Y M + G+ ITF+T+L + QIH
Sbjct: 109 VSWTIMIGGYSQNNQPKEAFNLYTEMCRSGV-KPDHITFATLLSGFDDTTTLKEVLQIHS 167
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
HI++FGF + + V + LVD Y K + +
Sbjct: 168 HIIRFGFSASLIVFNSLVDSYCKTCCL-------------------------------DI 196
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+ +LF M KDS+S+ MITG + G EA+ LF +MR FTF ++L G
Sbjct: 197 ASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVG 256
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+ G+QIH I+ + ++FV +AL+D Y K I A+++F M + VS+ +
Sbjct: 257 SEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNII 316
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ GY NG E++ +F +Q + +F +++S A +L G Q H +++VT
Sbjct: 317 ITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTA 376
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+S + V NALV Y KC ED++R+F + R+ V WTA++S Y + G E + +F++
Sbjct: 377 VSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKE 436
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M + D+ T L A + V G+ +++ G+ + ++D+ + G
Sbjct: 437 MNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIR-LGLLSSVFSGSVLVDMYANCG 495
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+++A +MP + + W L+S+ +G+ E + ++E Y P S LS
Sbjct: 496 SMKDAIEVFKEMP-DRNIVCWNALISAYSQNGDAEATFSSFADMIESGLY-PDSVSFLSV 553
Query: 487 IYA 489
+ A
Sbjct: 554 LTA 556
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 198/408 (48%), Gaps = 4/408 (0%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
FS S R VD+ + I+K GF + + + + I A++ FDE+P
Sbjct: 16 FSKRFYCGFSERIVDI--PVDARIVKTGFDPEISRFNFKLKDLVRANQIAKARQLFDEMP 73
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
+N N M++G ++ + +R LF M ++ +SWT MI G QN +EA +L+ E
Sbjct: 74 YRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTE 133
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M G+ D TF ++L+ L+E QIH+ IIR ++ V ++LVD YCK
Sbjct: 134 MCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCC 193
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A +F M K+ VS+ M+ GY + G EEA+K+F M+ +P FT +++
Sbjct: 194 LDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGM 253
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
+ G Q HG ++ T + I V+NAL+ FY K I+ + LF+EM D VS+
Sbjct: 254 SVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSY 313
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
+++GYA G+ ++ DLF+++ +LS + + GR V
Sbjct: 314 NIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVV 373
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ + ++D+ ++ + E+A + + +++ W ++S
Sbjct: 374 TTAVSEVQVG-NALVDMYAKCEKFEDANRIFANLAY-RNSVPWTAIIS 419
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 253/647 (39%), Positives = 381/647 (58%), Gaps = 32/647 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V+WN L++G+A +G AV + M ++ +T ++L + + +
Sbjct: 286 MPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGA 345
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
R++H ++ GF V V + ++D+Y K G
Sbjct: 346 CREVHAFAVRGGFDEQVNVSTAILDVYCKCGA---------------------------- 377
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
V+ +R++F GM+D++S+SW MI G +NG EA+ LF+ M EG+ + + +
Sbjct: 378 ---VDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAA 434
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L ACG L L+EG+++H ++R + NV V +AL+ MYCKCK A VF + +K
Sbjct: 435 LHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTR 494
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW AM++G QNG SE+AV++F MQ ++PD FTL S+I + A+++ + HG
Sbjct: 495 VSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGY 554
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
S+ L + V AL+ Y KCG + + LFN R ++W A++ GY G
Sbjct: 555 SIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVA 614
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++LFE+M S G P+E T + VLSACS AGLV++G+ YF M ++YG+ P +HY M+D
Sbjct: 615 VELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVD 674
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG+L EA SFI KMP P + +L +C++H NVE+ + +A+ + EL+P
Sbjct: 675 LLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVY 734
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
+VLL++IYA+ W V+++R M +KG++K PG S ++ K+ +H F + + + I
Sbjct: 735 HVLLANIYANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDI 794
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
YA L KL ++ GYVPD S+ HDVE K ++LN HSEKLAIA+GL+ PG I++
Sbjct: 795 YARLAKLIEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQI 853
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCHNATK IS +T REI++RD RFH FK+G+CSCGD+W
Sbjct: 854 KKNLRVCKDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 900
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 139/500 (27%), Positives = 233/500 (46%), Gaps = 51/500 (10%)
Query: 17 ASHGSVNDAVKVYNLM-LKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGS 75
AS + A+ + M G G + R TF+++L + ++R + GR +H + G
Sbjct: 200 ASRSDLRGALAAFAAMSPASGSGPVLR-TFTSLLKLCAARADLATGRAVHAQLAARGLSP 258
Query: 76 YVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMK 135
+ L +MYAK DA+R FD +P
Sbjct: 259 EALAATALANMYAKCRRPGDARRVFDRMPA------------------------------ 288
Query: 136 DKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQFTFGSVLTACGGLLALEEGK 194
+D ++W ++ G +NGL A+ + M+ E G D T SVL AC AL +
Sbjct: 289 -RDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACR 347
Query: 195 QIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNG 254
++HAF +R + V V +A++D+YCKC ++ A VF M +N VSW AM+ GY +NG
Sbjct: 348 EVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENG 407
Query: 255 CSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSN 314
+ EA+ +F M G++ D ++ + + +C L L+EG + H + GL S + V N
Sbjct: 408 DATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMN 467
Query: 315 ALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKP 374
AL+T Y KC + + ++F+E+ + VSW A++ G + G + + + LF +M +KP
Sbjct: 468 ALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKP 527
Query: 375 DEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH----YTCMIDILSRAGRLEE 430
D TL+ ++ A + + R + Y IR D T +ID+ ++ GR+
Sbjct: 528 DSFTLVSIIPALADISDPLQAR-----WIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSI 582
Query: 431 AKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY----NPASYVLLSS 486
A+S N I W ++ HG+ GK A E E+ N +++ + S
Sbjct: 583 ARSLFNS-ARDRHVITWNAMIHGYGSHGS---GKVAVELFEEMKSSGKVPNETTFLSVLS 638
Query: 487 IYASKGKWDHVSQLRRTMRE 506
+ G D + +M+E
Sbjct: 639 ACSHAGLVDEGQEYFSSMKE 658
>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 245/605 (40%), Positives = 377/605 (62%), Gaps = 1/605 (0%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
T+ ++ + S R ++ G+++H HI GF + + + L+ MYAK G + DA++ FDE+
Sbjct: 87 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM 146
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
P +++ +N M+ G GL+EE+R+LF M +KDS SWT M+TG ++ EA+ L+
Sbjct: 147 PNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYS 206
Query: 164 EM-RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC 222
M R+ + FT + A + + GK+IH I+R + + S+L+DMY KC
Sbjct: 207 LMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKC 266
Query: 223 KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
I A ++F + K+VVSWT+M+ Y ++ E +F + + P+++T V+
Sbjct: 267 GCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVL 326
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
++CA+L + E G Q HG G + S++LV Y KCGNIE + + + D V
Sbjct: 327 NACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLV 386
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
SWT+L+ G A+ G+ +E + F+ +L G KPD VT + VLSAC+ AGLVEKG +F +
Sbjct: 387 SWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSI 446
Query: 403 VKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
+++ + DHYTC++D+L+R+GR E+ KS I++MP P WA++L C +GN+++
Sbjct: 447 TEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDL 506
Query: 463 GKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKS 522
+ AA+ L +++P NP +YV +++IYA+ GKW+ ++R+ M+E GV K PG SW + K
Sbjct: 507 AEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKR 566
Query: 523 RVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEK 582
+ H+F A D S P +QI L +L +KM +EGYVP S VLHDVE +K + L +HSEK
Sbjct: 567 KRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEK 626
Query: 583 LAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECS 642
LA+AF +L G I+V KNLR C DCH A K+IS IT+R+I VRD+ RFH F+NG+CS
Sbjct: 627 LAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCS 686
Query: 643 CGDFW 647
CGD+W
Sbjct: 687 CGDYW 691
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 201/438 (45%), Gaps = 66/438 (15%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D SW +++G+ +A+ +Y+LM + + T S + +++ +C+
Sbjct: 177 MTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRR 236
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G++IHGHI++ G S + S L+DMY K G I +A+ FD++ EK++V
Sbjct: 237 GKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVV----------- 285
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SWT+MI ++ RE LF E+ +++TF V
Sbjct: 286 --------------------SWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGV 325
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L E GKQ+H ++ R F S+LVDMY KC +I+ A+ V ++
Sbjct: 326 LNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDL 385
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWT+++ G QNG +EA+K F + ++G +PD T +V+S+C + +E+G +F
Sbjct: 386 VSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEF--- 442
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
FY +I + HRL + + +T LV A+ G+ +
Sbjct: 443 ------------------FY----SITEKHRLSHTSD-----HYTCLVDLLARSGRFEQL 475
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ +M +KP + VL CS G ++ + + K P+ Y M +
Sbjct: 476 KSVISEM---PMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPV--TYVTMAN 530
Query: 421 ILSRAGRLEEAKSFINKM 438
I + AG+ EE +M
Sbjct: 531 IYAAAGKWEEEGKMRKRM 548
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 104/238 (43%), Gaps = 49/238 (20%)
Query: 258 EAVKIFCNMQ--RNGIE-------PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
EA+ + C + R ++ P T ++I C+ +LEEG + H +G +
Sbjct: 59 EAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVP 118
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
I + N L+ Y KCG++ D+ ++F+EM RD SW +V+GYA+ G E LF++M
Sbjct: 119 GIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM- 177
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP------------------ 410
+ D + +++ + E+ + +M + RP
Sbjct: 178 ---TEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCI 234
Query: 411 -----IHDH------------YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
IH H ++ ++D+ + G ++EA++ +K+ D + W +++
Sbjct: 235 RRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI-VEKDVVSWTSMI 291
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 254/644 (39%), Positives = 383/644 (59%), Gaps = 33/644 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V++N L++G+++ G +A++++ + G+ S TF+ +L + G+Q+
Sbjct: 205 DTVTFNSLMTGYSNEGLNEEAIELFLELHNSGI-KPSDFTFAALLSAAVGLDDTKFGQQV 263
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG +LK F VFVG+ L+D Y+K V
Sbjct: 264 HGFVLKTNFVWNVFVGNALLDYYSK-------------------------------HDQV 292
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+E +LF M + D IS+ +IT NG +E+ DLFR+++ QF F ++L+
Sbjct: 293 DEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIA 352
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L L G+QIH I V +ALVDMY KC K A+ +F +A K+ V WT
Sbjct: 353 TSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWT 412
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
AM+ Y Q G EE + +F +M+R G+ D T S++ +CANLAS+ G Q H + +
Sbjct: 413 AMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRS 472
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G +S + +AL+ Y KCG + D+ + F EM R+ VSW AL+S YA+ G + T++ F
Sbjct: 473 GFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSF 532
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
++M+ G KPD V+ + VLSACS G VE+ +F M + Y + P +HYT M+D+L R
Sbjct: 533 QQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCR 592
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL-DPYNPASYVL 483
GR +EA+ + +MPF P I W+++L+SCRIH N E+ K AA+ L + D + A Y+
Sbjct: 593 NGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYIN 652
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
+S+IYA G+WD+V+++++ MR++GVRK P SW++ K + H+FSA+D S P +I +
Sbjct: 653 MSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRK 712
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
+ L+++M K+GY PD + LHDV+ KI+ L +HSE+ AIAF L+ P G PI V+KN
Sbjct: 713 INALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKN 772
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LR C+DCH A K IS+I +REI+VRD+ RFH FK+G CSCGD+W
Sbjct: 773 LRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 135/534 (25%), Positives = 238/534 (44%), Gaps = 67/534 (12%)
Query: 6 GVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIH 65
VSW +LI G+ +A ++Y M + G+ +T T+L ++ QIH
Sbjct: 105 AVSWTILIGGYLQSNQSKEAFRLYADMRRGGI-EPDYVTLVTLLSGFGELETKNVIVQIH 163
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
H++K G+ + V + LVD Y K +Y A +
Sbjct: 164 THVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQ--------------------------- 196
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
LF+ M +KD++++ +++TG GL EAI+LF E+ G+ FTF ++L+A
Sbjct: 197 ----LFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAV 252
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
GL + G+Q+H F+++ + NVFVG+AL+D Y K + +F M + +S+
Sbjct: 253 GLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNV 312
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
++ Y NG +E+ +F +Q + F +++S + +L G Q H +++ G
Sbjct: 313 VITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVG 372
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
V NALV Y KC +++ ++F+ + + V WTA++S Y + GK E I++F
Sbjct: 373 ANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFS 432
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE------YGIRPIHDHYT--- 416
M G+ D+ T +L AC+ + GR ++++ Y + D Y
Sbjct: 433 DMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCG 492
Query: 417 CMIDILSRAGRLEEAKSF------------------INKMP------FPPDAIGWATLLS 452
CM D + G + E S +N + PD++ + ++LS
Sbjct: 493 CMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLS 552
Query: 453 SCRIHGNVEIGKWAAESLLELDPYNPAS--YVLLSSIYASKGKWDHVSQLRRTM 504
+C G VE W S+ ++ P Y + + G++D +L M
Sbjct: 553 ACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEM 606
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 144/540 (26%), Positives = 255/540 (47%), Gaps = 60/540 (11%)
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
I HI+K GF + V+ + + G + A + FD++P KN + N MI+G L+ G
Sbjct: 30 IDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGK 89
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
+ ++R LF GM ++ ++SWT +I G +Q+ +EA L+ +MR G+ D T ++L+
Sbjct: 90 LSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSG 149
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
G L QIH +I+ ++ N+ V ++LVD YCK + A +F+ M K+ V++
Sbjct: 150 FGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTF 209
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
+++ GY G +EEA+++F + +GI+P DFT +++S+ L + G Q HG L
Sbjct: 210 NSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLK 269
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
T + + V NAL+ +Y K +++ +LF EM D +S+ +++ YA G+ E+ DL
Sbjct: 270 TNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDL 329
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY----------FEIMVKEYGI----- 408
F K+ + +LS + + + GR FE V+ +
Sbjct: 330 FRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAK 389
Query: 409 -------RPIHDHYTC--------MIDILSRAGRLEEAKSFINKMP---FPPDAIGWATL 450
+ I D+ C MI + G+ EE + + M P D +A++
Sbjct: 390 CNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASI 449
Query: 451 LSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVR 510
L +C ++ +G+ L+ +S++Y+ S L T + G
Sbjct: 450 LRACANLASISLGRQLHSLLIRSG--------FMSNVYSG-------SALLDTYAKCGCM 494
Query: 511 KDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLN------RKMIKEGYVPDMSSVL 564
D S+ + R + W++ S YA+ ++ ++MI+ GY PD S L
Sbjct: 495 TDAIKSFGEMPERNSV----SWNALIS--AYAQNGNVDGTLNSFQQMIQSGYKPDSVSFL 548
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 176/354 (49%), Gaps = 38/354 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSR--ITFSTMLIMSSSRRCV 58
MP DG+S+N++I+ +A +G ++ ++L K R F+T+L +++S +
Sbjct: 302 MPELDGISYNVVITSYAWNGQFKES---FDLFRKLQFTRFDRRQFPFATLLSIATSSLNL 358
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
+GRQIH + G V + LVDMYAK +A++ FD + K+ V + MI+
Sbjct: 359 RMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAY 418
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+++G E E I++F +MR G+ DQ TF
Sbjct: 419 VQKGKHE-------------------------------EGINVFSDMRRTGVPADQATFA 447
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
S+L AC L ++ G+Q+H+ +IR+ NV+ GSAL+D Y KC + A F M +
Sbjct: 448 SILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPER 507
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT-QF 297
N VSW A++ Y QNG + + F M ++G +PD + SV+S+C++ +EE F
Sbjct: 508 NSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHF 567
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
+ + + + ++V + G +++ +L EM E+ W+++++
Sbjct: 568 NSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNS 621
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 256/647 (39%), Positives = 388/647 (59%), Gaps = 32/647 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+ + D VSW +++ + + +++K+++ M G + TF+++L ++
Sbjct: 206 IEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGF-KPNNFTFASVLKACVGLEVFNV 264
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +HG K + +FVG L+D+Y K G + DA + F+E
Sbjct: 265 GKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEE------------------ 306
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
M D I W+ MI Q+ EAI++F MR + +QFT S+
Sbjct: 307 -------------MPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASL 353
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L+ L+ G QIH +++ NVFV +AL+DMY KC ++ + +F
Sbjct: 354 LQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTD 413
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW ++VGY Q G E+A+ +F +M ++ + T SV+ +CA +A+LE G+Q H
Sbjct: 414 VSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSL 473
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
S+ T V NAL+ Y KCGNI+D+ +F+ + D+VSW A++SGY+ G E
Sbjct: 474 SVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEA 533
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ FE ML KPD+VT +G+LSACS AGL+++G+ YF+ MV+EY I P +HYTCM+
Sbjct: 534 LKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVW 593
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L R+G L++A ++++PF P + W LLS+C IH +VE+G+ +A+ +LE++P + A+
Sbjct: 594 LLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEAT 653
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
+VLLS+IYA+ +W +V+ +R +M+ KG+RK+PG SWI+ + RVH FS D S P + I
Sbjct: 654 HVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPDTKLI 713
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
LE LN K EGYVPD SSVL DVE +K + L HSE+LA+A+GL+ P P+R+
Sbjct: 714 NGMLEWLNMKARNEGYVPDFSSVLLDVEDVDKEQRLWVHSERLALAYGLIRTPSISPLRI 773
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+KNLR+C+DCH A K ISKI QR+I++RD RFH F G CSCGD+W
Sbjct: 774 IKNLRICADCHAAIKLISKIVQRDIIIRDMNRFHHFHEGICSCGDYW 820
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 152/512 (29%), Positives = 255/512 (49%), Gaps = 43/512 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VS+ LI G++ ++A+ +++ + +G L+ FST+L + S L
Sbjct: 105 MPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEG-HELNPFVFSTVLKLLVSAEWAKL 163
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +H + K GF S FVG+ L+D Y+ G
Sbjct: 164 GFSVHACVYKLGFDSDAFVGTALIDCYSVCGY---------------------------- 195
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
E +R++F ++ KD +SWT M+ ++N E++ LF MR+ G + FTF SV
Sbjct: 196 ---AECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASV 252
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC GL GK +H + + + +FVG L+D+Y K + A VF M +V
Sbjct: 253 LKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDV 312
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+ W+ M+ Y Q+ SEEA+++FC M+R + P+ FTL S++ +CA+L L+ G Q H
Sbjct: 313 IPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCH 372
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ GL + VSNAL+ Y KCG +E+S +LF+E +VSW ++ GY + G +
Sbjct: 373 VVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKA 432
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT---- 416
+ LF+ ML ++ EVT VL AC+ +E G + ++ I+D T
Sbjct: 433 LILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQ-----IHSLSVKTIYDKNTVVGN 487
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD-P 475
+ID+ ++ G +++A+ + M D + W ++S +HG ES+LE +
Sbjct: 488 ALIDMYAKCGNIKDAR-LVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECK 546
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREK 507
+ ++V + S ++ G D ++M E+
Sbjct: 547 PDKVTFVGILSACSNAGLLDRGQAYFKSMVEE 578
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 200/412 (48%), Gaps = 33/412 (8%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +H I+K G +F + L++ Y K + DA + FDE+P++N
Sbjct: 63 GKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRN------------- 109
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
++S+ T+I G Q EAI LF ++ EG ++ F F +V
Sbjct: 110 ------------------TVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTV 151
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L + G +HA + + + FVG+AL+D Y C + A VF + +K++
Sbjct: 152 LKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDM 211
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWT M+ Y +N C EE++K+F M+ G +P++FT SV+ +C L G HG
Sbjct: 212 VSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGC 271
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ T + + V L+ Y K G+++D+ ++F EM D + W+ +++ YA+ ++ E
Sbjct: 272 AFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEA 331
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
I++F +M + P++ TL +L AC+ ++ G +VK G+ ++D
Sbjct: 332 IEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVK-VGLDMNVFVSNALMD 390
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLE 472
+ ++ GR+E + ++ P D + W T++ GN E + +LE
Sbjct: 391 MYAKCGRMENSLQLFSESPNCTD-VSWNTVIVGYVQAGNGEKALILFKDMLE 441
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 130/280 (46%), Gaps = 2/280 (0%)
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
+ + +GS+L +C GK +H II+ + ++F + L++ Y K S+ A +F
Sbjct: 43 NTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLF 102
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
M +N VS+ ++ GY Q EA+ +F +Q G E + F +V+ + +
Sbjct: 103 DEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAK 162
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
G H G S V AL+ Y CG E + ++F+ + +D VSWT +V+ Y
Sbjct: 163 LGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYV 222
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
+ E++ LF +M G KP+ T VL AC + G+ K + +
Sbjct: 223 ENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELF 282
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ID+ ++G +++A +MP D I W+ +++
Sbjct: 283 VGVE-LIDLYIKSGDVDDALQVFEEMP-KDDVIPWSFMIA 320
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 95/223 (42%), Gaps = 7/223 (3%)
Query: 272 EPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHR 331
E + + GS++ SC G H + G + +N L+ FY K ++ D+ +
Sbjct: 41 EFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAK 100
Query: 332 LFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGL 391
LF+EM R+ VS+ L+ GY++ + +E I LF ++ G + + VL A
Sbjct: 101 LFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEW 160
Query: 392 VEKGRHYFEIMVKEYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
+ G F + Y + D + T +ID S G E A+ + + + D + W T
Sbjct: 161 AKLG---FSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEY-KDMVSW-T 215
Query: 450 LLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKG 492
+ +C + S + + + P ++ S + A G
Sbjct: 216 GMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVG 258
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 250/643 (38%), Positives = 392/643 (60%), Gaps = 32/643 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW +++ +A + D+++++ M G N + TF+ +L +G+ +
Sbjct: 106 DMVSWTGMVACYAENDRFQDSLQLFAEMRMVGF-NPNHFTFAGVLKACIGLEAFSVGKSV 164
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG +LK + ++VG L+D+Y K G D R F+E+P+
Sbjct: 165 HGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKH------------------ 206
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
D I W+ MI+ Q+ REA++LF +MR + +QFTF SVL +C
Sbjct: 207 -------------DVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSC 253
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+ L+ GKQ+H +++ NVFV +AL+D+Y KC + + +F + +N V+W
Sbjct: 254 ASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWN 313
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
M+VGY Q+G ++A+ ++ NM ++ + T SV+ +CA+LA++E GTQ H SL T
Sbjct: 314 TMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKT 373
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
+ V NAL+ Y KCG+I+++ +F+ ++ RDE+SW A++SGY+ G E + F
Sbjct: 374 IYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAF 433
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+ M P+++T + +LSACS AGL++ G++YF+ MV++YGI P +HYTCM+ +L R
Sbjct: 434 QMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGR 493
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
+G L++A I ++P P+ W LL +C IH +V++G +A+ +L++DP + A++VLL
Sbjct: 494 SGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLL 553
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S+IYA +W+ V+ +R+ M+ KGV+K+PG SWI+ + VH FS D S P I L
Sbjct: 554 SNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGDTSHPDMKMISGML 613
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
E LN K K GYVPD+++VL DVE EK + L HSE+LA+AFGL+ P IR++KNL
Sbjct: 614 EWLNMKTEKAGYVPDLNAVLRDVEDDEKKRHLWVHSERLALAFGLIRTPSRGHIRILKNL 673
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R+C+DCH+A K ISKI QR+I++RD RFH F++G CSCGD+W
Sbjct: 674 RICTDCHSAIKLISKIVQRDIIIRDMNRFHHFQDGICSCGDYW 716
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 147/500 (29%), Positives = 250/500 (50%), Gaps = 43/500 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VS+ LI G+ +++ V +++ + ++G L+ F+T+L + S C +L
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREG-HELNPFVFTTILKLLVSVECAEL 59
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+H I K G S FVG+ L+D YA G + A++ FD
Sbjct: 60 AYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFD------------------- 100
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ KD +SWT M+ +N ++++ LF EMR+ G + FTF V
Sbjct: 101 ------------AIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGV 148
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC GL A GK +H +++ ++ +++VG L+D+Y K VF M +V
Sbjct: 149 LKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDV 208
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+ W+ M+ Y Q+ S EAV++F M+R + P+ FT SV+ SCA++ +L+ G Q H
Sbjct: 209 IPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCH 268
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
L GL + VSNAL+ Y KCG +++S +LF E+ R+EV+W ++ GY + G ++
Sbjct: 269 VLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKA 328
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT---- 416
+ L++ ML ++ EVT VL AC+ +E G + ++ I+D
Sbjct: 329 LSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQ-----IHSLSLKTIYDKDVVVGN 383
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY 476
+ID+ ++ G ++ A+ + M D I W ++S +HG V A + + E +
Sbjct: 384 ALIDMYAKCGSIKNAR-LVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECV 442
Query: 477 -NPASYVLLSSIYASKGKWD 495
N ++V + S ++ G D
Sbjct: 443 PNKLTFVSILSACSNAGLLD 462
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 264/659 (40%), Positives = 400/659 (60%), Gaps = 16/659 (2%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSWN +++ + G A+K++ M +D ++ +L +S G+Q+
Sbjct: 213 DLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQV 272
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG+ L+ G VFVG+ +VDMYAK G++ +A + F+ + K++V +N M+TG + G
Sbjct: 273 HGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRF 332
Query: 125 EESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+++ LF ++++ + ++W+ +I G Q GL EA+D+FR+M L G + T S+
Sbjct: 333 DDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSL 392
Query: 181 LTACGGLLALEEGKQIHAFIIR-------NDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
L+ C L GK+ H I+ ND D++ V +AL+DMY KCKS K A ++F
Sbjct: 393 LSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFD 452
Query: 234 TMAWKN--VVSWTAMLVGYGQNGCSEEAVKIFCNMQR--NGIEPDDFTLGSVISSCANLA 289
+ K+ VV+WT ++ G Q+G + EA+++F M + N + P+ FT+ + +CA L
Sbjct: 453 LIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLG 512
Query: 290 SLEEGTQFHGRSLVTGLIS-FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
+L G Q H L S + V+N L+ Y K G+++ + +F+ M+ R+ VSWT+L+
Sbjct: 513 ALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLM 572
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
+GY G+ E + +F +M L PD VT + VL ACS +G+V++G +YF M K++G+
Sbjct: 573 TGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGV 632
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
P +HY CM+D+LSRAGRL+EA I MP P W LLS+CR++ NVE+G++AA
Sbjct: 633 VPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAAN 692
Query: 469 SLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFS 528
LLEL+ N SY LLS+IYA+ W V+++R M+ G++K PGCSW++ + F
Sbjct: 693 QLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFF 752
Query: 529 ADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFG 588
A DWS P S QIY L L +++ GYVPD LHDV+ EK +L+ HSEKLA+A+G
Sbjct: 753 AGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYG 812
Query: 589 LLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+L PG PIR+ KNLR C DCH+A YIS I + EI+VRD+ RFH FKNG CSC +W
Sbjct: 813 ILTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 871
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 137/501 (27%), Positives = 229/501 (45%), Gaps = 79/501 (15%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN LI G + D +++Y M + G TF +L G +H +
Sbjct: 113 WNQLIRRSVHLGFLEDVLQLYRRMQRLGW-RPDHYTFPFVLKACGEIPSFRCGASVHAVV 171
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
GF VFVG+ LV MY + G +A++ FDE+ E+ +
Sbjct: 172 FASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGV-------------------- 211
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQFTFGSVLTACGGL 187
D +SW +++ MQ G A+ +F M + G+ D + +VL AC +
Sbjct: 212 --------GDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASV 263
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM- 246
A GKQ+H + +R+ ++VFVG+A+VDMY KC ++ A VF M K+VVSW AM
Sbjct: 264 GAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMV 323
Query: 247 ----------------------------------LVGYGQNGCSEEAVKIFCNMQRNGIE 272
+ GY Q G EA+ +F M G E
Sbjct: 324 TGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSE 383
Query: 273 PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF--------ITVSNALVTFYGKCG 324
P+ TL S++S CA+ +L G + H + + +++ + V NAL+ Y KC
Sbjct: 384 PNVVTLVSLLSGCASAGTLLHGKETHCHA-IKWILNLDENDPGDDLMVINALIDMYSKCK 442
Query: 325 NIEDSHRLFNEMNVRDE--VSWTALVSGYAKFGKANETIDLFEKMLS--HGLKPDEVTLI 380
+ + + +F+ + +D V+WT L+ G A+ G+ANE ++LF +ML + + P+ T+
Sbjct: 443 SPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTIS 502
Query: 381 GVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF 440
L AC+R G + GR +++ + C+ID+ S++G ++ A+ + M
Sbjct: 503 CALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNM-H 561
Query: 441 PPDAIGWATLLSSCRIHGNVE 461
+ + W +L++ +HG E
Sbjct: 562 QRNGVSWTSLMTGYGMHGRGE 582
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 193/396 (48%), Gaps = 49/396 (12%)
Query: 142 WTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFII 201
W +I + G + + L+R M+ G D +TF VL ACG + + G +HA +
Sbjct: 113 WNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVF 172
Query: 202 RNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV---VSWTAMLVGYGQNGCSEE 258
+ + NVFVG+ LV MY +C + + A VF M + V VSW +++ Y Q G S
Sbjct: 173 ASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIR 232
Query: 259 AVKIFCNMQRN-GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALV 317
A+K+F M + GI PD +L +V+ +CA++ + G Q HG +L +GL + V NA+V
Sbjct: 233 AMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVV 292
Query: 318 TFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK----------- 366
Y KCG +E+++++F M V+D VSW A+V+GY++ G+ ++ + LFEK
Sbjct: 293 DMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVV 352
Query: 367 ------------------------MLSHGLKPDEVTLIGVLSACSRAGLVEKGR----HY 398
ML G +P+ VTL+ +LS C+ AG + G+ H
Sbjct: 353 TWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHA 412
Query: 399 FEIMVKEYGIRPIHDHYT--CMIDILSRAGRLEEAKSFINKMPFPPD--AIGWATLLSSC 454
+ ++ P D +ID+ S+ + A++ + +P P D + W L+
Sbjct: 413 IKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIP-PKDRSVVTWTVLIGGN 471
Query: 455 RIHGNVEIGKWAAESLLELDPY-NPASYVLLSSIYA 489
HG +L+ D + P ++ + ++ A
Sbjct: 472 AQHGEANEALELFSQMLQPDNFVMPNAFTISCALMA 507
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 181/396 (45%), Gaps = 75/396 (18%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKD-------------------GLGNLS 41
M D VSWN +++G++ G +DA+ ++ + ++ GLG +
Sbjct: 311 MKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEA 370
Query: 42 RITFSTMLIMSSSRRCVDL---------------GRQIHGHILKFGF-------GSYVFV 79
F ML+ S V L G++ H H +K+ G + V
Sbjct: 371 LDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMV 430
Query: 80 GSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDS 139
+ L+DMY+K A+ FD +P K D+
Sbjct: 431 INALIDMYSKCKSPKAARAMFDLIPPK-----------------------------DRSV 461
Query: 140 ISWTTMITGLMQNGLEREAIDLFREM-RLEGLAM-DQFTFGSVLTACGGLLALEEGKQIH 197
++WT +I G Q+G EA++LF +M + + M + FT L AC L AL G+QIH
Sbjct: 462 VTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIH 521
Query: 198 AFIIRNDHKDN-VFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCS 256
A+++RN + +FV + L+DMY K + A VF M +N VSWT+++ GYG +G
Sbjct: 522 AYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRG 581
Query: 257 EEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHGRSLVTGLISFITVSNA 315
EEA++IF MQ+ + PD T V+ +C++ +++G F+G + G++
Sbjct: 582 EEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYAC 641
Query: 316 LVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSG 350
+V + G ++++ L M ++ + W AL+S
Sbjct: 642 MVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSA 677
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 258/648 (39%), Positives = 400/648 (61%), Gaps = 36/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSWN L++G + +A+++++ + +G +++ T++T++ + ++ + + L
Sbjct: 262 METRDMVSWNTLMAGLQLNECELEALQLFHES-RATMGKMTQSTYATVIKLCANLKQLAL 320
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
RQ+H +LK GF V + L D Y+K G + DA F +M TG
Sbjct: 321 ARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIF------------SMTTG--- 365
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
++ +SWT +I+G +QNG A+ LF MR + + ++FT+ ++
Sbjct: 366 ---------------SRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAM 410
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A +L QIHA +I+ +++ FVG+AL+ Y K S + A S+F+ + K+V
Sbjct: 411 LKASLSILP----PQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDV 466
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCA-NLASLEEGTQFHG 299
V+W+AML + Q G E A +F M GI+P++FT+ SVI +CA A +++G QFH
Sbjct: 467 VAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHA 526
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
S+ I VS+ALV+ Y + GNI+ + +F RD VSW +++SGYA+ G + +
Sbjct: 527 ISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMK 586
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
I+ F +M + G++ D VT + V+ C+ GLV +G+ YF+ MV+++ I P +HY CM+
Sbjct: 587 AIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMV 646
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+ SRAG+L+E S I MPFP A+ W TLL +CR+H NVE+GK++A+ LL L+P++ +
Sbjct: 647 DLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSS 706
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+YVLLS+IYA+ GKW ++R+ M + V+K+ GCSWI+ K++VH F A D S P SDQ
Sbjct: 707 TYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQ 766
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY +L+ + ++ ++GY P+ S VLHD+ +K ML HSE+LA+AFGL+ PPG P++
Sbjct: 767 IYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQ 826
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+VKNLRVC DCH K +S I REI++RD RFH F G CSCGDFW
Sbjct: 827 IVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDFW 874
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 138/464 (29%), Positives = 236/464 (50%), Gaps = 48/464 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+W L++G A ++ + ++ M +G+ + TF+++L +S+ +DL
Sbjct: 161 MPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWP-NPFTFASVLSAVASQGALDL 219
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+++H +KFG S VFV + L++MYAK GL
Sbjct: 220 GQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGL---------------------------- 251
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
VE+++ +F M+ +D +SW T++ GL N E EA+ LF E R M Q T+ +V
Sbjct: 252 ---VEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATV 308
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR-TMAWKN 239
+ C L L +Q+H+ ++++ V +AL D Y KC + A ++F T +N
Sbjct: 309 IKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRN 368
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VVSWTA++ G QNG AV +F M+ + + P++FT +++ A+L+ L Q H
Sbjct: 369 VVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLK--ASLSILPP--QIHA 424
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ + T V AL+ Y K G+ ED+ +F + +D V+W+A++S +A+ G
Sbjct: 425 QVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEG 484
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACS--RAGLVEKGRHYFEIMVKEYGIRPIHDHY-- 415
LF KM G+KP+E T+ V+ AC+ AG V++GR + I +K HD
Sbjct: 485 ATYLFNKMAIQGIKPNEFTISSVIDACACPSAG-VDQGRQFHAISIKYR----YHDAICV 539
Query: 416 -TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ ++ + SR G ++ A+ + D + W +++S HG
Sbjct: 540 SSALVSMYSRKGNIDSAQIVFERQT-DRDLVSWNSMISGYAQHG 582
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 133/471 (28%), Positives = 213/471 (45%), Gaps = 55/471 (11%)
Query: 1 MPFHDG-VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
+P D V N ++ +A G V + + +++ + G+ + T S +L S
Sbjct: 58 IPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGV-LVDSATLSCVLKACRSVPDRV 116
Query: 60 LGRQIHGHILKFGFG-SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
LG Q+H +K G V G+ LVDMY K G +
Sbjct: 117 LGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVC------------------------ 152
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
E +F GM K+ ++WT+++TG + E + LF MR EG+ + FTF
Sbjct: 153 -------EGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFA 205
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
SVL+A AL+ G+++HA ++ + +VFV ++L++MY KC ++ A+SVF M +
Sbjct: 206 SVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETR 265
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
++VSW ++ G N C EA+++F + + T +VI CANL L Q H
Sbjct: 266 DMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLH 325
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN-EMNVRDEVSWTALVSGYAKFGKA 357
L G V AL Y KCG + D+ +F+ R+ VSWTA++SG + G
Sbjct: 326 SCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDI 385
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY-- 415
+ LF +M + P+E T +L A I+ + + I +Y
Sbjct: 386 PLAVVLFSRMREDRVMPNEFTYSAMLKA------------SLSILPPQIHAQVIKTNYQH 433
Query: 416 -----TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
T ++ S+ G E+A S I KM D + W+ +LS G+ E
Sbjct: 434 IPFVGTALLASYSKFGSTEDALS-IFKMIEQKDVVAWSAMLSCHAQAGDCE 483
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 155/314 (49%), Gaps = 2/314 (0%)
Query: 151 QNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH-KDNV 209
+ G+ E +D F R G+ +D T VL AC + G+Q+H ++ H + V
Sbjct: 76 RRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEV 135
Query: 210 FVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN 269
G++LVDMY KC S+ VF M KNVV+WT++L G E + +F M+
Sbjct: 136 SAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAE 195
Query: 270 GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
GI P+ FT SV+S+ A+ +L+ G + H +S+ G S + V N+L+ Y KCG +ED+
Sbjct: 196 GIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDA 255
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
+FN M RD VSW L++G E + LF + + K + T V+ C+
Sbjct: 256 KSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANL 315
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
+ R ++K +G + T + D S+ G L +A + + + + W
Sbjct: 316 KQLALARQLHSCVLK-HGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTA 374
Query: 450 LLSSCRIHGNVEIG 463
++S C +G++ +
Sbjct: 375 IISGCIQNGDIPLA 388
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 258/653 (39%), Positives = 389/653 (59%), Gaps = 23/653 (3%)
Query: 3 FHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGR 62
F ++W +I + SHG + ++ + ML GL + F ++L + ++LG
Sbjct: 68 FPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV-FPSVLKSCALLMDLNLGE 126
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRG-------FDELPEKNIVMYNTMI 115
+HG+I++ G ++ G+ L++MY+KL + ++ R FDE+ E+ + +
Sbjct: 127 SLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSV 186
Query: 116 TGLLRRGLVEES-RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
L E+S R++F M +KD +SW T+I G +NGL E + + REM L D
Sbjct: 187 -------LSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDS 239
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
FT SVL + + GK+IH IR +++V S+L+DMY KC + + VF
Sbjct: 240 FTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTL 299
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
+ ++ +SW +++ G QNG +E ++ F M I+P ++ S++ +CA+L +L G
Sbjct: 300 LTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLG 359
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
Q HG G I ++++LV Y KCGNI + ++F+ M +RD VSWTA++ G A
Sbjct: 360 KQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALH 419
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G+A + I+LFE+M + G+K VL+ACS GLV++ YF M +++GI P +H
Sbjct: 420 GQAPDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEH 472
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
Y + D+L RAGRLEEA FI M P WATLLS+CR+H N+++ + A +LE+D
Sbjct: 473 YAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKNIDMAEKVANRILEVD 532
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS 534
P N +Y+LL++IY++ +W ++ R +MR G+RK P CSWI+ K++V+ F A D S
Sbjct: 533 PNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESH 592
Query: 535 PYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPP 594
P ++I +E L M KEGYVPD S V HDVE +K ++ HSE+LAI FG++ P
Sbjct: 593 PCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPA 652
Query: 595 GLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G+ IRV KNLRVC+DCH ATK+ISKI REI+VRD RFH FKNG CSCGD+W
Sbjct: 653 GMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 705
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 203/398 (51%), Gaps = 55/398 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLS--RITFSTMLIMSSSRRCV 58
MP D VSWN +I+G+A +G + +++ M G NL T S++L + + +
Sbjct: 199 MPEKDLVSWNTIIAGNARNGLYEETLRMIREM---GGANLKPDSFTLSSVLPLIAENVDI 255
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G++IHG ++ G + ++V S L+DMYAK + D+ R F L E++ + +N++I G
Sbjct: 256 SRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGC 315
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
++ GL +E R FR+M + + ++F
Sbjct: 316 VQNGLFDEGLR-------------------------------FFRQMLMAKIKPKSYSFS 344
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
S++ AC L L GKQ+H +I RN +N+F+ S+LVDMY KC +I+ A+ +F M +
Sbjct: 345 SIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLR 404
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-F 297
++VSWTAM++G +G + +A+++F M+ GI+ +V+++C++ ++E + F
Sbjct: 405 DMVSWTAMIMGCALHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWKYF 457
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGK 356
+ + G+ + A+ G+ G +E+++ M++ S W L+S +
Sbjct: 458 NSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSA----CR 513
Query: 357 ANETIDLFEKMLSHGLKPDE------VTLIGVLSACSR 388
++ ID+ EK+ + L+ D + L + SA R
Sbjct: 514 VHKNIDMAEKVANRILEVDPNNTGAYILLANIYSAARR 551
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 175/370 (47%), Gaps = 34/370 (9%)
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
L+ +S RLF + +++W ++I +GL +++ F M GL D F SVL
Sbjct: 55 LLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLK 114
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYA-------------- 228
+C L+ L G+ +H +IIR +++ G+AL++MY K + ++ +
Sbjct: 115 SCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEM 174
Query: 229 ------------------ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
+F M K++VSW ++ G +NG EE +++ M
Sbjct: 175 TERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGAN 234
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
++PD FTL SV+ A + G + HG S+ GL + I V+++L+ Y KC + DS
Sbjct: 235 LKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSC 294
Query: 331 RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
R+F + RD +SW ++++G + G +E + F +ML +KP + ++ AC+
Sbjct: 295 RVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLT 354
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATL 450
+ G+ + + G + ++D+ ++ G + AK ++M D + W +
Sbjct: 355 TLHLGKQLHGYITRN-GFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRL-RDMVSWTAM 412
Query: 451 LSSCRIHGNV 460
+ C +HG
Sbjct: 413 IMGCALHGQA 422
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 121/283 (42%), Gaps = 35/283 (12%)
Query: 231 VFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS 290
+F T+ + ++W +++ Y +G +++ F M +G+ PD SV+ SCA L
Sbjct: 62 LFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMD 121
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHR-------LFNEMNVR---- 339
L G HG + GL + NAL+ Y K +E+S R +F+EM R
Sbjct: 122 LNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSV 181
Query: 340 ---------------------DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVT 378
D VSW +++G A+ G ET+ + +M LKPD T
Sbjct: 182 RTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFT 241
Query: 379 LIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
L VL + + +G+ +++ G+ + +ID+ ++ R+ ++ +
Sbjct: 242 LSSVLPLIAENVDISRGKEIHGCSIRQ-GLDADIYVASSLIDMYAKCTRVADSCRVFTLL 300
Query: 439 PFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
D I W ++++ C +G + G +L + P SY
Sbjct: 301 T-ERDGISWNSIIAGCVQNGLFDEGLRFFRQML-MAKIKPKSY 341
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 248/637 (38%), Positives = 394/637 (61%), Gaps = 3/637 (0%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
+SWN +I GHA A+ +Y M+ GL S TF + + + G+QIH
Sbjct: 44 LSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSY-TFPFLFKSCAKSKAAQEGKQIHA 102
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
ILK+G + V + L+ MYA+ G++ DA + FD +++V Y MITG RG +++
Sbjct: 103 QILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDK 162
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
++++F + KD +SW MI+G + G +EA++LF EM + D+ T +VL+ C
Sbjct: 163 AQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTH 222
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+E G+QIH++I + N+ + +AL+D+Y KC ++ A +F + +K+V+SW +
Sbjct: 223 SGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTL 282
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG--RSLVT 304
+ GY +EA+ +F M + G P+D T+ S++ +CA+L +++ G H +
Sbjct: 283 IGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLK 342
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G+I+ ++ +L+ Y KCGNIE ++++F+ + + S A++ G+A G+A+ DL
Sbjct: 343 GIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLL 402
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+M G++PD++T +G+LSACS AGL + GR F+ M +Y I P +HY CMID+L R
Sbjct: 403 SRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGR 462
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
+G +EA+ IN M PD + W +LL +C+IH N+E+G+ A+ L++++P NP SYVLL
Sbjct: 463 SGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLL 522
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S+IYA+ +WD V+++R + +KG++K PGCS I+ S VH F D P + +IY L
Sbjct: 523 SNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIGDKFHPQNKEIYKML 582
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
E+++ + + G+V D S VL ++E K L++HSEKLAIAFGL+ PG +R+VKNL
Sbjct: 583 EEIDSLLAETGFVSDTSEVLQEMEEELKEGALSYHSEKLAIAFGLISTKPGTKLRIVKNL 642
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGEC 641
RVC +CH ATK ISKI +REI+ RD RFH FK+G C
Sbjct: 643 RVCRNCHEATKLISKIYKREIIARDRSRFHHFKDGMC 679
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 195/408 (47%), Gaps = 68/408 (16%)
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
+F+ +++ + +SW TMI G + A++L+ M GL+ + +TF + +C A
Sbjct: 34 VFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKA 93
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
+EGKQIHA I++ ++ V ++L+ MY + ++ A VF T + ++VVS+TAM+ G
Sbjct: 94 AQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITG 153
Query: 250 YGQNGCSE-------------------------------EAVKIFCNMQRNGIEPDDFTL 278
Y G + EA+++F M + ++PD+ T+
Sbjct: 154 YASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTM 213
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
+V+S+C + ++E G Q H G S + + NAL+ Y KCG +E +H LF +
Sbjct: 214 ATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQY 273
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR-- 396
+D +SW L+ GYA E + +F++ML G P++VT++ +L AC+ G ++ GR
Sbjct: 274 KDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWI 333
Query: 397 HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAK-----------SFINKMPF----- 440
H + I K GI T +ID+ ++ G +E A S N M F
Sbjct: 334 HVY-IDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMH 392
Query: 441 ------------------PPDAIGWATLLSSCRIHGNVEIGKWAAESL 470
PD I + LLS+C G ++G+ +S+
Sbjct: 393 GRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSM 440
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 177/357 (49%), Gaps = 42/357 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VSWN +ISG+A G +A++++N M+K + T +T+L + V+L
Sbjct: 170 IPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDV-KPDESTMATVLSTCTHSGNVEL 228
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQIH I GFGS + + + L+D+Y+K G + A F+ L K+++ +NT+I G
Sbjct: 229 GRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAY 288
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+EA+ +F+EM G + T S+
Sbjct: 289 I-------------------------------NHHKEALLVFQEMLKLGETPNDVTMLSI 317
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHK-----DNVFVGSALVDMYCKCKSIKYAESVFRTM 235
L AC L A++ G+ IH +I D K N + ++L+DMY KC +I+ A VF T+
Sbjct: 318 LPACAHLGAIDIGRWIHVYI---DKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTI 374
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
K++ S AM+ G+ +G ++ A + M+++GIEPDD T ++S+C++ + G
Sbjct: 375 LNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGR 434
Query: 296 Q-FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
+ F +L + + ++ G+ G +++ L N M + D V W +L+
Sbjct: 435 KIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKA 491
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 143/311 (45%), Gaps = 41/311 (13%)
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ YA SVF+++ N +SW M+ G+ + A+ ++ M G+ P+ +T + S
Sbjct: 28 LPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKS 87
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
CA + +EG Q H + L GL + V +L++ Y + G +ED+H++F+ + RD VS+
Sbjct: 88 CAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSY 147
Query: 345 TAL-------------------------------VSGYAKFGKANETIDLFEKMLSHGLK 373
TA+ +SGYA+ G+ E ++LF +M+ +K
Sbjct: 148 TAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVK 207
Query: 374 PDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKS 433
PDE T+ VLS C+ +G VE GR + +G +ID+ S+ G +E A
Sbjct: 208 PDESTMATVLSTCTHSGNVELGRQ-IHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHG 266
Query: 434 FINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASK-- 491
+ + D I W TL+ + + + +L+L P +LS + A
Sbjct: 267 LFEGLQY-KDVISWNTLIGGYAYINHHKEALLVFQEMLKLGE-TPNDVTMLSILPACAHL 324
Query: 492 -----GKWDHV 497
G+W HV
Sbjct: 325 GAIDIGRWIHV 335
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 253/639 (39%), Positives = 374/639 (58%), Gaps = 30/639 (4%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN ++S + + DA+ +++ ++ T ++ + + LG+ IHG
Sbjct: 175 WNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMA 234
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
K S VFVG+ L+ MY K GL+ +A +
Sbjct: 235 TKMDLVSDVFVGNALIAMYGKCGLVEEA------------------------------VK 264
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
R+F M K SW ++ G QN R+A+DL+ +M GL D FT GS+L AC +
Sbjct: 265 RVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMK 324
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
+L G++IH F +RN + F+G +L+ +Y C A+ +F M +++VSW M+
Sbjct: 325 SLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIA 384
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
GY QNG +EA+ +F M +GI+P + + V +C+ L++L G + H +L L
Sbjct: 385 GYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTE 444
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
I VS++++ Y K G I S R+F+ + +D SW +++GY G+ E ++LFEKML
Sbjct: 445 DIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKML 504
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
GLKPD+ T G+L ACS AGLVE G YF M+ + I P +HYTC++D+L RAGR+
Sbjct: 505 RLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRI 564
Query: 429 EEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIY 488
++A I +MP PD+ W++LLSSCRIHGN+ +G+ A LLEL+P P +YVL+S+++
Sbjct: 565 DDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLF 624
Query: 489 ASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLN 548
A GKWD V ++R M++ G++KD GCSWI+ +VH F D P +++ +L
Sbjct: 625 AGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLE 684
Query: 549 RKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCS 608
K+ GY PD SVLHD+E +KI +L HSEKLAI+FGLL GLP+RV KNLR+C
Sbjct: 685 VKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICG 744
Query: 609 DCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
DCHNA K+ISK+ R+I+VRD RFH F++G CSCGD+W
Sbjct: 745 DCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 783
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 193/364 (53%), Gaps = 7/364 (1%)
Query: 107 NIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM- 165
+ V+ +IT G +SR +F ++ K+ W +++ +N L +A+ +F E+
Sbjct: 140 DFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELI 199
Query: 166 RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI 225
+ D FT V+ AC GLL L G+ IH + D +VFVG+AL+ MY KC +
Sbjct: 200 SVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLV 259
Query: 226 KYA-ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A + VF M K V SW A+L GY QN +A+ ++ M +G++PD FT+GS++ +
Sbjct: 260 EEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLA 319
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
C+ + SL G + HG +L GL + +L++ Y CG + LF+ M R VSW
Sbjct: 320 CSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSW 379
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
+++GY++ G +E I+LF +MLS G++P E+ ++ V ACS+ + G+ +K
Sbjct: 380 NVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALK 439
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
+ I + +ID+ ++ G + ++ +++ D W +++ IHG GK
Sbjct: 440 AHLTEDIFVS-SSIIDMYAKGGCIGLSQRIFDRLR-EKDVASWNVIIAGYGIHGR---GK 494
Query: 465 WAAE 468
A E
Sbjct: 495 EALE 498
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 185/383 (48%), Gaps = 35/383 (9%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
SWN L+ G+A + A+ +Y M GL + T ++L+ S + + G +IHG
Sbjct: 277 SWNALLCGYAQNSDPRKALDLYLQMTDSGL-DPDWFTIGSLLLACSRMKSLHYGEEIHGF 335
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
L+ G F+G L+ +Y G + A+ FD + +++V +N MI G + GL +
Sbjct: 336 ALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPD-- 393
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
EAI+LFR+M +G+ + V AC L
Sbjct: 394 -----------------------------EAINLFRQMLSDGIQPYEIAIMCVCGACSQL 424
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
AL GK++H F ++ +++FV S+++DMY K I ++ +F + K+V SW ++
Sbjct: 425 SALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVII 484
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL-VTGL 306
GYG +G +EA+++F M R G++PDDFT ++ +C++ +E+G ++ + L + +
Sbjct: 485 AGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNI 544
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEM-NVRDEVSWTALVSGYAKFGKANETIDLFE 365
+ +V G+ G I+D+ RL EM D W++L+S G +
Sbjct: 545 EPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVAN 604
Query: 366 KMLS-HGLKPDEVTLIGVLSACS 387
K+L KP+ LI L A S
Sbjct: 605 KLLELEPEKPENYVLISNLFAGS 627
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 137/262 (52%), Gaps = 12/262 (4%)
Query: 146 ITGLMQNGLEREAIDLFREMRLEGLAMDQF----TFGSVLTACGGLLALEEGKQIHAFII 201
I L ++G +EA+D F + + + +D G +L ACG +E G+++H +
Sbjct: 74 IKKLCESGNLKEALD-FLQRESDDVVLDSAQRSEAMGVLLQACGQRKDIEVGRRLHEMVS 132
Query: 202 RNDHKDNVFV-GSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAV 260
+ N FV + ++ MY C S + VF + KN+ W A++ Y +N E+A+
Sbjct: 133 ASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAM 192
Query: 261 KIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTF 319
IF + +PD+FTL VI +CA L L G HG + L+S + V NAL+
Sbjct: 193 SIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAM 252
Query: 320 YGKCGNIEDS-HRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVT 378
YGKCG +E++ R+F+ M+ + SW AL+ GYA+ + +DL+ +M GL PD T
Sbjct: 253 YGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFT 312
Query: 379 LIGVLSACSRAGLVEKGRHYFE 400
+ +L ACSR K HY E
Sbjct: 313 IGSLLLACSRM----KSLHYGE 330
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSWN++I+G++ +G ++A+ ++ ML DG+ I + S + LG+++H
Sbjct: 377 VSWNVMIAGYSQNGLPDEAINLFRQMLSDGI-QPYEIAIMCVCGACSQLSALRLGKELHC 435
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
LK +FV S ++DMYAK G I ++R FD L EK++ +N +I G G
Sbjct: 436 FALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHG---- 491
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
RG +EA++LF +M GL D FTF +L AC
Sbjct: 492 -----RG----------------------KEALELFEKMLRLGLKPDDFTFTGILMACSH 524
Query: 187 LLALEEG 193
+E+G
Sbjct: 525 AGLVEDG 531
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D SWN++I+G+ HG +A++++ ML+ GL TF+ +L+ S V+ G +
Sbjct: 476 DVASWNVIIAGYGIHGRGKEALELFEKMLRLGL-KPDDFTFTGILMACSHAGLVEDGLEY 534
Query: 65 HGHILKF-GFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
+L + + +VDM + G I DA R +E+P
Sbjct: 535 FNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMP 575
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 259/647 (40%), Positives = 381/647 (58%), Gaps = 33/647 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN +I+G + +G A+++ L ++D IT T+L ++ + +
Sbjct: 208 MPERDLVSWNTIIAGFSQNGFAKKALELV-LRMQDEGQRPDSITLVTVLPAAADVGLLMV 266
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ IHG+ ++ GF V + + L DMY+K G
Sbjct: 267 GKSIHGYAIRAGFAKLVNISTALADMYSKCGS---------------------------- 298
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
VE +R +F GM K +SW +M+ G +QNG +AI +F +M EG+ T
Sbjct: 299 ---VETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEA 355
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L LE GK +H F+ + + ++ V ++L+ MY KCK + A +F + +
Sbjct: 356 LHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTH 415
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW AM++GY QNG EA+ F M+ G++PD FT+ SVI + A L+ HG
Sbjct: 416 VSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGL 475
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ + L I V+ ALV Y KCG I + +LF+ ++ R ++W A++ GY G
Sbjct: 476 IIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAA 535
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+DLF+KM ++P+++T + V+SACS +GLV++G +F+ M ++YG+ P DHY M+D
Sbjct: 536 LDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVD 595
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAGR++EA FI MP P + +C+IH N+E+G+ AA+ L EL+P
Sbjct: 596 LLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGY 655
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
+VLL++IYAS KW V+++R+TM +KG++K PGCS ++ ++ VH F + + P S +I
Sbjct: 656 HVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRI 715
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
YA LE+L ++ GYVPD + +L DVE + ++LN HSEKLAIAFGLL PG I V
Sbjct: 716 YAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHV 774
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCHNATKYIS +T REI+VRD RFH FKNG CSCGD+W
Sbjct: 775 RKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 134/450 (29%), Positives = 222/450 (49%), Gaps = 34/450 (7%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
++ ++ G+A + S+ A+ M D + + F+ +L + + G++IHG +
Sbjct: 115 YHTMLKGYAKNSSLETALAFLCRMRYDDVKPVV-YNFTYLLKVCGDNADLKRGKEIHGQL 173
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+ F + VF + +V+MYAK I DA + FD +PE+
Sbjct: 174 ITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPER---------------------- 211
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
D +SW T+I G QNG ++A++L M+ EG D T +VL A +
Sbjct: 212 ---------DLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVG 262
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
L GK IH + IR V + +AL DMY KC S++ A +F M K VVSW +M+
Sbjct: 263 LLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMD 322
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
GY QNG E+A+ +F M GI+P T+ + +CA+L LE G H L S
Sbjct: 323 GYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGS 382
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
I+V N+L++ Y KC ++ + +FN +N R VSW A++ GYA+ G+ +E ++ F +M
Sbjct: 383 DISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMK 442
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
S G+KPD T++ V+ A + + + ++++ + I T ++D+ S+ G +
Sbjct: 443 SLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFV-TTALVDMYSKCGAI 501
Query: 429 EEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
A+ + M I W ++ HG
Sbjct: 502 HMARKLFD-MISDRHVITWNAMIDGYGTHG 530
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 173/330 (52%), Gaps = 2/330 (0%)
Query: 110 MYNTMITGLLRR-GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE 168
++ T + L + G + E+ R+F + DK + TM+ G +N A+ MR +
Sbjct: 82 LFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYD 141
Query: 169 GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYA 228
+ + F +L CG L+ GK+IH +I N NVF + +V+MY KC+ I A
Sbjct: 142 DVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDA 201
Query: 229 ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL 288
+F M +++VSW ++ G+ QNG +++A+++ MQ G PD TL +V+ + A++
Sbjct: 202 YKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADV 261
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
L G HG ++ G + +S AL Y KCG++E + +F+ M+ + VSW +++
Sbjct: 262 GLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMM 321
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
GY + G+ + I +FEKML G+ P VT++ L AC+ G +E+G+ + V + +
Sbjct: 322 DGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGK-FVHKFVDQLNL 380
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
+I + S+ R++ A N +
Sbjct: 381 GSDISVMNSLISMYSKCKRVDIASDIFNNL 410
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 156/321 (48%), Gaps = 12/321 (3%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
+++E QI +I+N + + LV ++ K SI A VF + K + ML
Sbjct: 61 SMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLK 120
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
GY +N E A+ C M+ + ++P + ++ C + A L+ G + HG+ + +
Sbjct: 121 GYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAA 180
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
+ +V Y KC I+D++++F+ M RD VSW +++G+++ G A + ++L +M
Sbjct: 181 NVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQ 240
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
G +PD +TL+ VL A + GL+ G+ ++ G + + T + D+ S+ G +
Sbjct: 241 DEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRA-GFAKLVNISTALADMYSKCGSV 299
Query: 429 EEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIY 488
E A+ + M + W +++ +G E E +LE + +P ++ +++
Sbjct: 300 ETARLIFDGMD-QKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLE-EGIDPTGVTIMEALH 357
Query: 489 A-------SKGKWDH--VSQL 500
A +GK+ H V QL
Sbjct: 358 ACADLGDLERGKFVHKFVDQL 378
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 255/643 (39%), Positives = 373/643 (58%), Gaps = 31/643 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +SWN +ISG A G +++++ +L+ GL S + SS +GRQ+
Sbjct: 362 DLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQV 421
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H LK G FV + L+D+Y+K G +
Sbjct: 422 HTCALKAGIVLDSFVSTALIDVYSK-------------------------------GGKM 450
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
EE+ LF D SW M+ G + REA+ LF M G DQ TF + A
Sbjct: 451 EEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAA 510
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G L+ L++GKQIHA +I+ ++FV S ++DMY KC +K A VF + + V+WT
Sbjct: 511 GCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWT 570
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++ G +NG E+A+ + M+ G++PD++T +++ +C+ L +LE+G Q H +
Sbjct: 571 TVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKL 630
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
V +LV Y KCGNIED++ LF MN R W A++ G A+ G A E ++ F
Sbjct: 631 NCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFF 690
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+M S G+ PD VT IGVLSACS +GL F+ M K YG+ P +HY+C++D LSR
Sbjct: 691 NEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSR 750
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG ++EA+ ++ MPF A + TLL++CR+ G+ E G+ AE L +DP + A+YVLL
Sbjct: 751 AGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLL 810
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S+IYA+ +W++ R M+ V+K+PG SWI K++VH+F A D S +D IY ++
Sbjct: 811 SNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKV 870
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
E + +++ +EGYVPD L D+E +K L++HSEKLAIA+GL+ PP +RV+KNL
Sbjct: 871 EYVMKRIKEEGYVPDTEFALVDIEEEDKESALSYHSEKLAIAYGLMKTPPSTTLRVIKNL 930
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RVC DCHNA KYIS + QREI++RDA RFH F++G CSCGD+W
Sbjct: 931 RVCGDCHNAIKYISNVFQREIVLRDANRFHHFRSGICSCGDYW 973
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 140/557 (25%), Positives = 258/557 (46%), Gaps = 67/557 (12%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNL-----MLKDGLGNLSRITFSTMLIMSSSRRCVD 59
D V++N +++ +A G ++D K + +L+ + +R T S + +
Sbjct: 80 DLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPS 139
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+ G+ +K G VFV LV++YAK I +A+ FD +P +++V++N M+ +
Sbjct: 140 ASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYV 199
Query: 120 RRGLVEE-------------------------------------------SRRLFRGMKD 136
G +E + +LF D
Sbjct: 200 EMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDD 259
Query: 137 KDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQI 196
D W ++ +Q G EA+D FR+M + D T+ +L+ L LE GKQI
Sbjct: 260 SDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQI 319
Query: 197 HAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCS 256
H ++R V V ++ ++MY K S+ YA +F M +++SW ++ G ++G
Sbjct: 320 HGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLE 379
Query: 257 EEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE----GTQFHGRSLVTGLISFITV 312
E ++++F ++ R+G+ PD FT+ SV+ +C +SLEE G Q H +L G++ V
Sbjct: 380 ECSLRLFIDLLRSGLLPDQFTITSVLRAC---SSLEESYCVGRQVHTCALKAGIVLDSFV 436
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGL 372
S AL+ Y K G +E++ LF+ + D SW A++ G+ E + LF M G
Sbjct: 437 STALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGE 496
Query: 373 KPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC--MIDILSRAGRLEE 430
K D++T A +++G+ +++K +R +D + ++D+ + G ++
Sbjct: 497 KADQITFANAAKAAGCLVRLQQGKQIHAVVIK---MRFHYDLFVISGILDMYLKCGEMKS 553
Query: 431 AKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL----LELDPYNPASYVLLSS 486
A+ N++P PD + W T++S C +G E + + ++ D Y A+ V S
Sbjct: 554 ARKVFNQIP-SPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACS 612
Query: 487 IYAS--KGKWDHVSQLR 501
+ + +GK H + ++
Sbjct: 613 LLTALEQGKQIHANIMK 629
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/462 (28%), Positives = 229/462 (49%), Gaps = 43/462 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D WN +S + G +AV + M+K + S +T+ +L + +S ++LG+QI
Sbjct: 261 DVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDS-LTYIVILSVVASLNHLELGKQI 319
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG +++FG+ +V V + ++MY K G + A+R F ++ E +++ +NT+I+G R GL
Sbjct: 320 HGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLE 379
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
E S RLF IDL R GL DQFT SVL AC
Sbjct: 380 ECSLRLF---------------------------IDLLR----SGLLPDQFTITSVLRAC 408
Query: 185 GGLLALEE----GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+LEE G+Q+H ++ + FV +AL+D+Y K ++ AE +F ++
Sbjct: 409 S---SLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDL 465
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
SW AM+ G+ + EA+++F M G + D T + + L L++G Q H
Sbjct: 466 ASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAV 525
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ + V + ++ Y KCG ++ + ++FN++ D+V+WT ++SG + G+ +
Sbjct: 526 VIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQA 585
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH-YFEIMVKEYGIRPIHDHYTCMI 419
+ + +M G++PDE T ++ ACS +E+G+ + IM P T ++
Sbjct: 586 LFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPF--VMTSLV 643
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
D+ ++ G +E+A +M A+ W ++ HGN E
Sbjct: 644 DMYAKCGNIEDAYGLFRRMNTRSVAL-WNAMIVGLAQHGNAE 684
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 165/401 (41%), Gaps = 56/401 (13%)
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPE--KNIVMYNTMITG 117
LG++ H I+ G +V + L+ MYAK G ++ A++ FD P+ +++V YN ++
Sbjct: 31 LGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAA 90
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
G + + + EA +FR +R + + T
Sbjct: 91 YAHTGELHDVEK-------------------------THEAFHIFRLLRQSVMLTTRHTL 125
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
+ C + + + + ++ + +VFV ALV++Y K + I+ A +F M
Sbjct: 126 SPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPV 185
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
++VV W M+ Y + G +E + +F R+G+ PD ++ +++ E +
Sbjct: 186 RDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELE- 244
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
R+ T L F+ ++ VT W +S Y + G+
Sbjct: 245 QVRAYATKL--FVCDDDSDVTV------------------------WNKTLSSYLQAGEG 278
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
E +D F M+ + D +T I +LS + +E G+ +V+ +G
Sbjct: 279 WEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVR-FGWDQFVSVANS 337
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
I++ +AG + A+ +M D I W T++S C G
Sbjct: 338 AINMYVKAGSVNYARRMFGQMK-EVDLISWNTVISGCARSG 377
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 87/170 (51%), Gaps = 5/170 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D V+W +ISG +G A+ Y+ M G+ TF+T++ S ++
Sbjct: 561 IPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGV-QPDEYTFATLVKACSLLTALEQ 619
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIH +I+K FV + LVDMYAK G I DA F + +++ ++N MI GL +
Sbjct: 620 GKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQ 679
Query: 121 RGLVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMR 166
G EE+ F MK + D +++ +++ +GL +A F M+
Sbjct: 680 HGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQ 729
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 254/643 (39%), Positives = 388/643 (60%), Gaps = 32/643 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW +++ +A + ++++++N M G + T S L ++G+ +
Sbjct: 201 DMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKP-NNFTISGALKSCLGLEAFNVGKSV 259
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG LK + +FVG L+++YAK G I DA+R
Sbjct: 260 HGCALKGCYDHDLFVGIALLELYAKSGEIIDAQR-------------------------- 293
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
LF M D I W+ MI Q+ +EA+DLF MR + + FTF SVL AC
Sbjct: 294 -----LFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQAC 348
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
++L+ GKQIH+ +++ NVFV +A++D+Y KC I+ + +F + +N V+W
Sbjct: 349 ASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWN 408
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++VGY Q G E A+ +F +M + ++P + T SV+ + A+LA+LE G Q H ++ T
Sbjct: 409 TIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKT 468
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
V+N+L+ Y KCG I D+ F++MN RDEVSW A++ GY+ G + E ++LF
Sbjct: 469 MYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLF 528
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+ M KP+++T +GVLSACS AGL+ KG+ +FE M K+Y I+P +HYTCM+ +L R
Sbjct: 529 DMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGR 588
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
GR +EA I ++ + P + W LL +C IH V++G+ A+ +LE++P++ A++VLL
Sbjct: 589 LGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLL 648
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S++YA+ G+WD+V+ +R+ M++K VRK+PG SW++ + VH FS D S P I A L
Sbjct: 649 SNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAML 708
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
E LN+K GYVPD ++VL DV+ EK + L HSE+LA+A+GL+ P IR++KNL
Sbjct: 709 EWLNKKTRDAGYVPDCNAVLLDVQDDEKERHLWVHSERLALAYGLIRTPLSCSIRIIKNL 768
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R+C DCH K ISK+ QREI++RD RFH F++G CSCGD+W
Sbjct: 769 RICIDCHTVMKLISKVVQREIVIRDINRFHHFRHGVCSCGDYW 811
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 231/462 (50%), Gaps = 42/462 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +S+ L G++ + A+ + K+G ++ F+T+L + S L
Sbjct: 96 MPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEG-HEVNPFVFTTLLKLLVSMDLAHL 154
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+H + K G + FVG+ L+D Y+
Sbjct: 155 CWTLHACVYKLGHHADAFVGTALIDAYSV------------------------------- 183
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
RG V+ +R +F + KD +SWT M+ +N E++ LF +MR+ G + FT
Sbjct: 184 RGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGA 243
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L +C GL A GK +H ++ + ++FVG AL+++Y K I A+ +F M ++
Sbjct: 244 LKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDL 303
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+ W+ M+ Y Q+ S+EA+ +F M++ + P++FT SV+ +CA+ SL+ G Q H
Sbjct: 304 IPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSC 363
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
L GL S + VSNA++ Y KCG IE+S +LF E+ R++V+W ++ GY + G
Sbjct: 364 VLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERA 423
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC--- 417
++LF ML H ++P EVT VL A + +E G + + I+ +++ T
Sbjct: 424 MNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPG-----LQIHSLTIKTMYNKDTVVAN 478
Query: 418 -MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ID+ ++ GR+ +A+ +KM D + W ++ +HG
Sbjct: 479 SLIDMYAKCGRINDARLTFDKMN-KRDEVSWNAMICGYSMHG 519
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 172/352 (48%), Gaps = 34/352 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D + W+L+I+ +A +A+ ++ M + + + TF+++L +S +DL
Sbjct: 298 MPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVP-NNFTFASVLQACASSVSLDL 356
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIH +LKFG S VFV + ++D+YAK G I
Sbjct: 357 GKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEI--------------------------- 389
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
E S +LF + D++ ++W T+I G +Q G A++LF M + + T+ SV
Sbjct: 390 ----ENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSV 445
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A L ALE G QIH+ I+ + + V ++L+DMY KC I A F M ++
Sbjct: 446 LRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDE 505
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQFHG 299
VSW AM+ GY +G S EA+ +F MQ +P+ T V+S+C+N L +G F
Sbjct: 506 VSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFES 565
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV-SWTALVSG 350
S + I +V G+ G +++ +L E+ + V W AL+
Sbjct: 566 MSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGA 617
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 189/403 (46%), Gaps = 38/403 (9%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +H HILK G +F + L++ Y + + DA + FDE
Sbjct: 54 GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDE------------------ 95
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
M ++IS+ T+ G ++ +A+ + EG ++ F F ++
Sbjct: 96 -------------MPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTL 142
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L + +HA + + H + FVG+AL+D Y ++ A VF + K++
Sbjct: 143 LKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDM 202
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWT M+ Y +N EE++++F M+ G +P++FT+ + SC L + G HG
Sbjct: 203 VSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGC 262
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+L + V AL+ Y K G I D+ RLF EM D + W+ +++ YA+ ++ E
Sbjct: 263 ALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEA 322
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+DLF +M + P+ T VL AC+ + ++ G+ ++K +G+ ++D
Sbjct: 323 LDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLK-FGLNSNVFVSNAIMD 381
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
+ ++ G +E + ++P D + W T+ I G V++G
Sbjct: 382 VYAKCGEIENSMKLFEELPDRND-VTWNTI-----IVGYVQLG 418
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 246/637 (38%), Positives = 395/637 (62%), Gaps = 3/637 (0%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN + GHA A+ +Y M+ GL S TF +L + + G+QIHGH+
Sbjct: 71 WNTMFRGHALSSDPVSALYLYVCMISLGLVPNS-YTFPFLLKACAKSKAFREGQQIHGHV 129
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
LK G ++V + L+ MY K G DA++ FD+ +++V Y +I G G + ++
Sbjct: 130 LKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQ 189
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
++F + KD +SW +I+G + G +EA++LF+EM + D+ T +VL+AC
Sbjct: 190 KMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSA 249
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
++E G+Q+H++I + N+ + +AL+D+Y KC ++ A +F +++K+V+SW ++
Sbjct: 250 SIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIG 309
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG--RSLVTGL 306
GY +EA+ +F M R+G P++ T+ S++ +CA+L +++ G H + G+
Sbjct: 310 GYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGV 369
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ ++ +L+ Y KCG+IE + ++F+ M R SW A++ G+A G+AN D+F +
Sbjct: 370 SNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSR 429
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M G++PD++T +G+LSACS +G+++ GRH F M ++Y I P +HY CMID+L +G
Sbjct: 430 MRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSG 489
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+EA+ IN M PD + W +LL +C++HGNVE+G+ A++L++++P N SYVLLS+
Sbjct: 490 LFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSN 549
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IYA+ G+W+ V++ R + +KG++K PGCS I+ S VH F D P + +IY LE+
Sbjct: 550 IYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRNREIYGMLEE 609
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
+ + + G+VPD S VL ++E K L HHSEKLAIAFGL+ PG + +VKNLRV
Sbjct: 610 MEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRV 669
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSC 643
C +CH ATK ISKI +REI+ RD RFH F +G CSC
Sbjct: 670 CRNCHEATKLISKIYKREIIARDRTRFHHFXDGVCSC 706
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 215/484 (44%), Gaps = 108/484 (22%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKL-----GLIYDAKRGFDELPEKNIVMYNTMIT 116
R IH ++K G + + S L++ ++ L GL Y A FD + E N++++NTM
Sbjct: 19 RIIHAKMIKTGLHNTNYALSKLIE-FSVLSPHFDGLTY-AISVFDSIQEPNLLIWNTM-- 74
Query: 117 GLLRRGLVEESRRLFRGMK-DKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
FRG D +S A+ L+ M GL + +
Sbjct: 75 --------------FRGHALSSDPVS----------------ALYLYVCMISLGLVPNSY 104
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS----------- 224
TF +L AC A EG+QIH +++ +++V ++L+ MY K
Sbjct: 105 TFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQS 164
Query: 225 --------------------IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFC 264
I A+ +F + K+VVSW A++ GY + G +EA+++F
Sbjct: 165 SHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFK 224
Query: 265 NMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCG 324
M + ++PD+ T+ +V+S+CA AS+E G Q H G S + + NAL+ Y KCG
Sbjct: 225 EMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCG 284
Query: 325 NIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
+E + LF ++ +D +SW L+ GY E + LF++ML G P+EVT++ +L
Sbjct: 285 EVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILP 344
Query: 385 ACSRAGLVEKGR--HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM---- 438
AC+ G ++ GR H + I + G+ T +ID+ ++ G +E A+ + M
Sbjct: 345 ACAHLGAIDIGRWIHVY-IDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRS 403
Query: 439 ------------------------------PFPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
PD I + LLS+C G +++G+
Sbjct: 404 LSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFR 463
Query: 469 SLLE 472
S+ E
Sbjct: 464 SMTE 467
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 205/433 (47%), Gaps = 71/433 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VSWN LISG+A G+ +A++++ M+K + T T+L + ++L
Sbjct: 195 IPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNV-KPDESTMVTVLSACAQSASIEL 253
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H I GFGS + + + L+D+Y K G + A F+ L K+++ +NT+I G
Sbjct: 254 GRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGG--- 310
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+T M L +EA+ LF+EM G + ++ T S+
Sbjct: 311 ---------------------YTHM-------NLYKEALLLFQEMLRSGESPNEVTMLSI 342
Query: 181 LTACGGLLALEEGKQIHAFIIR--NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
L AC L A++ G+ IH +I + + + ++L+DMY KC I+ A+ VF +M +
Sbjct: 343 LPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNR 402
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
++ SW AM+ G+ +G + A IF M+++GIEPDD T ++S+C++ L+
Sbjct: 403 SLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDL----- 457
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
GR + + ++ L YG ++ LF E A
Sbjct: 458 GRHIFRSMTEDYKITPKL-EHYGCMIDLLGHSGLFKE---------------------AE 495
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD-HYTC 417
E I+ E + PD V +L AC G VE G + + ++K I P + Y
Sbjct: 496 EMINSME------MDPDGVIWCSLLKACKMHGNVELGESFAQNLIK---IEPKNSGSYVL 546
Query: 418 MIDILSRAGRLEE 430
+ +I + AGR E
Sbjct: 547 LSNIYATAGRWNE 559
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 143/307 (46%), Gaps = 39/307 (12%)
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVD---MYCKCKSIKYAESVFRTM 235
S+L C L +L + IHA +I+ + + S L++ + + YA SVF ++
Sbjct: 7 SLLHNCKTLQSL---RIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSI 63
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
N++ W M G+ + A+ ++ M G+ P+ +T ++ +CA + EG
Sbjct: 64 QEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQ 123
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL-------- 347
Q HG L G + V +L+ Y K G ED+ ++F++ + RD VS+TAL
Sbjct: 124 QIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNG 183
Query: 348 -----------------------VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
+SGYA+ G E ++LF++M+ +KPDE T++ VLS
Sbjct: 184 YIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLS 243
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDA 444
AC+++ +E GR + ++G +ID+ + G +E A + + D
Sbjct: 244 ACAQSASIELGRQVHS-WIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSY-KDV 301
Query: 445 IGWATLL 451
I W TL+
Sbjct: 302 ISWNTLI 308
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 253/647 (39%), Positives = 387/647 (59%), Gaps = 32/647 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +SWN +I+G A +AV ++ +L+ GL S + SS + L
Sbjct: 383 MSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSL 442
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+QIH H +K + FV + L+D Y+ R
Sbjct: 443 SKQIHVHAIKTNNVADSFVSTALIDAYS-------------------------------R 471
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
++E+ LF G + D ++W M++G Q+ + ++LF M +G D FT +V
Sbjct: 472 NRCMKEAEVLF-GRNNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATV 530
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L CG L A+ +GKQ+HA+ I++ + +++V S ++DMY KC + A+ F ++ +
Sbjct: 531 LKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDD 590
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+WT ++ G +NG E A+ +F M+ G+ PD+FT+ ++ + + L +LE+G Q H
Sbjct: 591 VAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHAN 650
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+L S V +LV Y KCG+I+D++ LF + + + +W A++ G A+ G+ E
Sbjct: 651 ALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEA 710
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LF++M S G+KPD+VT IGVLSACS +GLV + Y M ++YGI+P +HY+C+ D
Sbjct: 711 LQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLAD 770
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
L RAG ++EA++ I+ M A + TLL++CR+ G+ E GK A LLEL+P + ++
Sbjct: 771 ALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSA 830
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS++YA+ KWD + R M+ V+KDPG SWI+ K+++H+F DD S+P ++ I
Sbjct: 831 YVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELI 890
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y +++ + R + +EGYVP+ L DVE EK + L +HSEKLA+AFGLL PP PIRV
Sbjct: 891 YKKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRV 950
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+KNLRVC DCHNA KYISK+ REI++RDA RFH FK+G CSCGD+W
Sbjct: 951 IKNLRVCGDCHNAMKYISKVYDREIVLRDANRFHRFKDGICSCGDYW 997
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 138/508 (27%), Positives = 240/508 (47%), Gaps = 54/508 (10%)
Query: 1 MPFHDGVSWNLLISGHA--SHGSVNDAVKVYNL--MLKDGLGNLSRITFSTMLIMSSSRR 56
MP D VSWN +++ +A S G V + + + L +L+ + SR+T S ML +
Sbjct: 107 MPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSG 166
Query: 57 CVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMIT 116
V HG+ K G FV LV++Y K G + + + F+E+P +++V++N M+
Sbjct: 167 YVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLK 226
Query: 117 GLLRRGLVEE------------------SRRLFRGMKDKDS------------------- 139
L G EE + RL + DS
Sbjct: 227 AYLEMGFKEEAIDLSSAFHTSGLHPNEITLRLLSRISGDDSEAGQVKSFENGNDASAVSE 286
Query: 140 -ISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHA 198
IS +++G + G + F +M L DQ TF VL L +L G+Q+H
Sbjct: 287 IISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHC 346
Query: 199 FIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEE 258
++ + V ++L++MYCK + I A +VF M+ ++++SW +++ G Q+ E
Sbjct: 347 MALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVE 406
Query: 259 AVKIFCNMQRNGIEPDDFTLGSVISSCANLAS-LEEGTQFHGRSLVTGLISFITVSNALV 317
AV +F + R G++PD +T+ SV+ + ++L L Q H ++ T ++ VS AL+
Sbjct: 407 AVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALI 466
Query: 318 TFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEV 377
Y + ++++ LF N D V+W A++SGY + ++T++LF M G + D+
Sbjct: 467 DAYSRNRCMKEAEVLFGRNNF-DLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDF 525
Query: 378 TLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH----YTCMIDILSRAGRLEEAKS 433
TL VL C + +G+ V Y I+ +D + ++D+ + G + A+
Sbjct: 526 TLATVLKTCGFLFAINQGKQ-----VHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQF 580
Query: 434 FINKMPFPPDAIGWATLLSSCRIHGNVE 461
+ +P P D + W TL+S C +G E
Sbjct: 581 AFDSIPVPDD-VAWTTLISGCIENGEEE 607
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 227/455 (49%), Gaps = 40/455 (8%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
+S N ++SG+ G + +K + M++ L ++TF +L + + LG+Q+H
Sbjct: 288 ISRNKILSGYLHAGQYSALLKCFMDMVESDL-ECDQVTFILVLATAVRLDSLALGQQVHC 346
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
LK G + V + L++MY KL I GL
Sbjct: 347 MALKLGLDLMLTVSNSLINMYCKLRKI----------------------------GL--- 375
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+R +F M ++D ISW ++I G+ Q+ LE EA+ LF ++ GL D +T SVL A
Sbjct: 376 ARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASS 435
Query: 187 LL-ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
L L KQIH I+ ++ + FV +AL+D Y + + +K AE +F + ++V+W A
Sbjct: 436 LPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGRNNF-DLVAWNA 494
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
M+ GY Q+ + +++F M + G DDFTL +V+ +C L ++ +G Q H ++ +G
Sbjct: 495 MMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSG 554
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
+ VS+ ++ Y KCG++ + F+ + V D+V+WT L+SG + G+ + +F
Sbjct: 555 YDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFS 614
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--TCMIDILS 423
+M G+ PDE T+ + A S +E+GR +I + D + T ++D+ +
Sbjct: 615 QMRLMGVLPDEFTIATLAKASSCLTALEQGR---QIHANALKLNCTSDPFVGTSLVDMYA 671
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ G +++A ++ + W +L HG
Sbjct: 672 KCGSIDDAYCLFKRIEM-MNITAWNAMLVGLAQHG 705
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 5/192 (2%)
Query: 193 GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
GK HA I+ + F+ + L+ MY KC S+ YA VF M +++VSW ++L Y Q
Sbjct: 65 GKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQ 124
Query: 253 N--GCSE---EAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
+ G E EA +F ++++ + TL ++ C + + FHG + GL
Sbjct: 125 SSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLD 184
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
V+ ALV Y K G +++ LF EM RD V W ++ Y + G E IDL
Sbjct: 185 GDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAF 244
Query: 368 LSHGLKPDEVTL 379
+ GL P+E+TL
Sbjct: 245 HTSGLHPNEITL 256
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 169/395 (42%), Gaps = 64/395 (16%)
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
LG+ H IL F+ + L+ MY+K G + A+R FD++PE+++V +N+++
Sbjct: 64 LGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILA--- 120
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
++ G+++N +EA LFR +R + + + T
Sbjct: 121 ---------------------AYAQSSEGVVEN--VKEAFLLFRILRQDVVYTSRMTLSP 157
Query: 180 VLTAC--GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
+L C G + E +A I D D FV ALV++Y K +K +F M +
Sbjct: 158 MLKLCLHSGYVCASESFHGYACKIGLDGDD--FVAGALVNIYLKFGKVKEGRVLFEEMPY 215
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
++VV W ML Y + G EEA+ + +G+ P++ TL
Sbjct: 216 RDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITL------------------- 256
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
L+S I+ ++ + G ++ + V + +S ++SGY G+
Sbjct: 257 -------RLLSRISGDDS------EAGQVKSFENGNDASAVSEIISRNKILSGYLHAGQY 303
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
+ + F M+ L+ D+VT I VL+ R + G+ M + G+ +
Sbjct: 304 SALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQ-VHCMALKLGLDLMLTVSNS 362
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+I++ + ++ A++ N M D I W ++++
Sbjct: 363 LINMYCKLRKIGLARTVFNNMS-ERDLISWNSVIA 396
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 258/645 (40%), Positives = 391/645 (60%), Gaps = 36/645 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL-GRQ 63
D +SWN ++SG +G ++A++ Y+ M +D G + +I +S+R L G Q
Sbjct: 347 DTISWNSMLSGFVQNGLYHEALQFYHEM-RDA-GQKPDLVAVISIIAASARSGNTLHGMQ 404
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
IH + +K G S + VG+ LVDMYAK + FD++P
Sbjct: 405 IHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMP------------------- 445
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
DKD +SWTT+I G QNG A++LFRE++LEG+ +D S+L A
Sbjct: 446 ------------DKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLA 493
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C GL + K+IH++IIR D V + + +VD+Y +C ++ YA +F + +K+VVSW
Sbjct: 494 CSGLKLISSVKEIHSYIIRKGLSDLV-LQNGIVDVYGECGNVDYAARMFELIEFKDVVSW 552
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
T+M+ Y NG + EA+++F M+ G+EPD +L S++S+ A+L++L++G + HG +
Sbjct: 553 TSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIR 612
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
G + ++++ LV Y +CG +E S +FN + +D V WT++++ Y G IDL
Sbjct: 613 KGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDL 672
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F +M + PD + + VL ACS +GL+ +GR + E M EY + P +HY C++D+L
Sbjct: 673 FRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLG 732
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
RA LEEA F+ M P A W LL +C+IH N E+G+ AA+ LLE+DP NP +YVL
Sbjct: 733 RANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVL 792
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
+S++Y+++ +W V +R M+ G++K+PGCSWI+ ++VH F A D S P S +IY++
Sbjct: 793 VSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSK 852
Query: 544 LEKLNRKMIKE-GYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVK 602
L ++ K+ KE GYV VLH+ + EK++ML HSE+LAIA+G+L P G +R+ K
Sbjct: 853 LSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITK 912
Query: 603 NLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
NLRVC DCHN K ISK +RE+++RDA RFH FK G CSCGD W
Sbjct: 913 NLRVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 957
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 139/454 (30%), Positives = 239/454 (52%), Gaps = 35/454 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSWN +IS ++S+G +A++++ M K L + TF L + G I
Sbjct: 246 DVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAP-NTYTFVAALQACEDSSFIKQGMFI 304
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +LK + VFV + L+ MYA+ G K G
Sbjct: 305 HATVLKSSYYINVFVANALIAMYARFG-----KMG------------------------- 334
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
E+ +F M D D+ISW +M++G +QNGL EA+ + EMR G D S++ A
Sbjct: 335 -EAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAAS 393
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G QIHA+ ++N ++ VG++LVDMY K S+KY + +F M K+VVSWT
Sbjct: 394 ARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWT 453
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++ G+ QNG A+++F +Q GI+ D + S++ +C+ L + + H +
Sbjct: 454 TIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRK 513
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
GL S + + N +V YG+CGN++ + R+F + +D VSWT+++S Y G ANE ++LF
Sbjct: 514 GL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELF 572
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
M G++PD ++L+ +LSA + ++KG+ ++++ G + ++D+ +R
Sbjct: 573 HLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRK-GFVLEGSLASTLVDMYAR 631
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
G LE++++ N + D + W +++++ +HG
Sbjct: 632 CGTLEKSRNVFNFIR-NKDLVLWTSMINAYGMHG 664
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/442 (27%), Positives = 217/442 (49%), Gaps = 47/442 (10%)
Query: 20 GSVNDAVKVYNLMLKDGLGNLSRITFS------TMLIMSSSRRCVDLGRQIHGHILKFG- 72
GSVN+A + L D N S FS ++L + S++ + G+Q+H H++
Sbjct: 54 GSVNEAFQS----LTDLFANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNA 109
Query: 73 -FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLF 131
F S VF+ + LV MY K G + DA++ FD
Sbjct: 110 LFNS-VFLSTRLVFMYGKCGCLVDAEKLFD------------------------------ 138
Query: 132 RGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALE 191
GM K +W MI + NG +++L+REMR+ G+ +D TF +L ACG L
Sbjct: 139 -GMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRR 197
Query: 192 EGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK-NVVSWTAMLVGY 250
G ++H I+ + VFV +++V MY KC + A +F M K +VVSW +M+ Y
Sbjct: 198 YGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAY 257
Query: 251 GQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFI 310
NG S EA+++F MQ+ + P+ +T + + +C + + +++G H L + +
Sbjct: 258 SSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINV 317
Query: 311 TVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH 370
V+NAL+ Y + G + ++ +F M+ D +SW +++SG+ + G +E + + +M
Sbjct: 318 FVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDA 377
Query: 371 GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEE 430
G KPD V +I +++A +R+G G +K G+ ++D+ ++ ++
Sbjct: 378 GQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKN-GLDSDLQVGNSLVDMYAKFCSMKY 436
Query: 431 AKSFINKMPFPPDAIGWATLLS 452
+KMP D + W T+++
Sbjct: 437 MDCIFDKMP-DKDVVSWTTIIA 457
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 125/460 (27%), Positives = 229/460 (49%), Gaps = 35/460 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP +WN +I + ++G ++++Y M G+ L TF +L +
Sbjct: 140 MPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIP-LDACTFPCILKACGLLKDRRY 198
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G ++HG +K G+ S VFV + +V MY K + A++ FD +PEK
Sbjct: 199 GAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEK-------------- 244
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+D +SW +MI+ NG EA+ LF EM+ LA + +TF +
Sbjct: 245 ----------------EDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAA 288
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC +++G IHA ++++ + NVFV +AL+ MY + + A ++F M +
Sbjct: 289 LQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDT 348
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SW +ML G+ QNG EA++ + M+ G +PD + S+I++ A + G Q H
Sbjct: 349 ISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAY 408
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ GL S + V N+LV Y K +++ +F++M +D VSWT +++G+A+ G +
Sbjct: 409 AMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRA 468
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++LF ++ G+ D + + +L ACS L+ + ++++ G+ + ++D
Sbjct: 469 LELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRK-GLSDLVLQ-NGIVD 526
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
+ G ++ A + F D + W +++ SC +H +
Sbjct: 527 VYGECGNVDYAARMFELIEF-KDVVSWTSMI-SCYVHNGL 564
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 177/350 (50%), Gaps = 35/350 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSW +I+GHA +GS + A++++ + +G+ +L + S++L+ S + +
Sbjct: 444 MPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGI-DLDVMMISSILLACSGLKLISS 502
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
++IH +I++ G V + + +VD+Y + G + A R F+ + K++V + +MI+ +
Sbjct: 503 VKEIHSYIIRKGLSDLV-LQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVH 561
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL E+ LF MK + G+E ++I L S+
Sbjct: 562 NGLANEALELFHLMK---------------ETGVEPDSISLV----------------SI 590
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+A L AL++GK+IH F+IR + S LVDMY +C +++ + +VF + K++
Sbjct: 591 LSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDL 650
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF-HG 299
V WT+M+ YG +GC A+ +F M+ I PD +V+ +C++ + EG +F
Sbjct: 651 VLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLES 710
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALV 348
L + LV G+ ++E++++ M V W AL+
Sbjct: 711 MKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALL 760
>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 257/657 (39%), Positives = 389/657 (59%), Gaps = 18/657 (2%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRC---- 57
P +W +ISG A G D ++ + ML D G T +++ RC
Sbjct: 85 PTRSLPAWTSIISGCAREGRHADGMRAFAEML-DECG----ATAPNAFVLAGVLRCCAGL 139
Query: 58 --VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
V+ GR+IHG IL+ G V + + ++DMYAK G A+R F + +K+ +N +I
Sbjct: 140 GDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIVI 199
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
L+ G + + +LF +D SW T+++GLM++G EA+ ++M G+ +
Sbjct: 200 RACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNY 259
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
T+ V G L + + G+Q+H ++ +++ FVG +L+DMYCKC ++ A S+F
Sbjct: 260 TYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDR- 318
Query: 236 AWKNVV-----SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS 290
W + +W+ M+ GY QNG EEA++ F M R G+ F L SV S+CAN
Sbjct: 319 -WSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGM 377
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
+E+G Q HG G +++A+V Y K G++ED+ R+F ++ WT ++
Sbjct: 378 VEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCS 437
Query: 351 YAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP 410
YA G+ +++F +M + + P+E+TL+ VLSACS +GLV G HYF +M +EYGI P
Sbjct: 438 YASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVP 497
Query: 411 IHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL 470
+HY CM+D+ RAG L++AK+FI + +A+ W TLLS+CR+H ++E + A+E L
Sbjct: 498 NTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLHKHIEYAQLASEKL 557
Query: 471 LELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSAD 530
++L+ Y+ SYVL+S++YA+ KW +LR +M+E+ VRK PG SWI K+ VH F A
Sbjct: 558 VQLEQYDAGSYVLMSNMYATNNKWLDTFKLRSSMKERRVRKQPGQSWIHLKNVVHRFVAL 617
Query: 531 DWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLL 590
D S P S +IYA LEKL ++ + GY V+HD+E ++ L HSEKLAIAFG++
Sbjct: 618 DTSHPRSAEIYAYLEKLMERLKEMGYTSRTDLVVHDIEEEQRETSLKFHSEKLAIAFGII 677
Query: 591 FIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
P G +R+ KNLRVC DCH A K+I++ T REI+VRD RFH FK+G+CSC DFW
Sbjct: 678 STPVGTALRIFKNLRVCEDCHEAIKFITRATDREIVVRDLYRFHHFKDGQCSCEDFW 734
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 194/414 (46%), Gaps = 48/414 (11%)
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE--GLAMD 173
+ ++ RGL + R+F G + +WT++I+G + G + + F EM E A +
Sbjct: 67 SSVIARGL-HNAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPN 125
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
F VL C GL +E G++IH +I+R+ +V + +A++DMY KC A F
Sbjct: 126 AFVLAGVLRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFG 185
Query: 234 TMAWK-------------------------------NVVSWTAMLVGYGQNGCSEEAVKI 262
MA K +V SW ++ G ++G + EA+
Sbjct: 186 AMAQKDATSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGR 245
Query: 263 FCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGK 322
M R G+ ++T V + L+S + G Q HGR +V L V +L+ Y K
Sbjct: 246 LQQMVRAGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCK 305
Query: 323 CGNIEDSHRLFN---EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTL 379
CG +E + +F+ + + +W+ +V+GY + G+ E ++ F +ML G+ + L
Sbjct: 306 CGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFIL 365
Query: 380 IGVLSACSRAGLVEKGR--HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINK 437
V SAC+ AG+VE+GR H F V++ G R + ++D+ S++G LE+A
Sbjct: 366 TSVASACANAGMVEQGRQVHGF---VEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRS 422
Query: 438 MPFPPDAIGWATLLSSCRIHGNVEIGKWAAE--SLLELDPYNPASYVLLSSIYA 489
A+ W T+L S HG G+ A E S ++ + P L++ + A
Sbjct: 423 AQTKNVAL-WTTMLCSYASHGQ---GRMALEIFSRMKAEKIMPNEITLVAVLSA 472
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 252/643 (39%), Positives = 402/643 (62%), Gaps = 37/643 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V+WN +ISG+A++G +A+ ++ M + + LS +F++++ + ++ + + Q+H
Sbjct: 265 VTWNSMISGYAANGLDLEALGMFYSMRLNHV-RLSESSFASIIKLCANLKELRFTEQLHC 323
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++K+GF + + L+ Y+K + DA R F E TG L
Sbjct: 324 SVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKE-------------TGFL------- 363
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+ +SWT MI+G +QN + EA+ LF EM+ +G+ ++FT+ +LTA
Sbjct: 364 ----------GNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTA--- 410
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L + ++HA +++ +++ + VG+AL+D Y K + A VF + K++V+W+AM
Sbjct: 411 -LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAM 469
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCA-NLASLEEGTQFHGRSLVTG 305
L GY Q G +E A+KIF + + G++P++FT S+++ CA AS+ +G QFHG ++ +
Sbjct: 470 LAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSR 529
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
L S + VS+AL+T Y K G+IE + +F +D VSW +++SGYA+ G+A + +D+F+
Sbjct: 530 LDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFK 589
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
+M +K D VT IGV +AC+ AGLVE+G YF+IMV++ I P +H +CM+D+ SRA
Sbjct: 590 EMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRA 649
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
G+LE+A I+ MP + W T+L++CR+H E+G+ AAE ++ + P + A+YVLLS
Sbjct: 650 GQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLS 709
Query: 486 SIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELE 545
++YA G W +++R+ M E+ V+K+PG SWI+ K++ + F A D S P DQIY +LE
Sbjct: 710 NMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLE 769
Query: 546 KLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
L+ ++ GY PD S VL D++ K +L HSE+LAIAFGL+ P G P+ ++KNLR
Sbjct: 770 DLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLR 829
Query: 606 VCSDCHNATKYISKITQREILVRDAVRFHLF-KNGECSCGDFW 647
VC DCH K I+KI +REI+VRD+ RFH F +G CSCGDFW
Sbjct: 830 VCGDCHVVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 872
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 226/466 (48%), Gaps = 49/466 (10%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL- 60
P D S+ L+ G + G +A +++ + G+ + FS++L +S++ C +L
Sbjct: 58 PDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGM-EMDCSIFSSVLKVSATL-CDELF 115
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H +KFGF V VG+ LVD Y K D + FDE
Sbjct: 116 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDE------------------ 157
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
MK+++ ++WTT+I+G +N L E + LF M+ EG + FTF +
Sbjct: 158 -------------MKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAA 204
Query: 181 LTACGGLLALE----EGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
L G+LA E G Q+H +++N + V ++L+++Y KC +++ A +F
Sbjct: 205 L----GVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTE 260
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
K+VV+W +M+ GY NG EA+ +F +M+ N + + + S+I CANL L Q
Sbjct: 261 VKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQ 320
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN-VRDEVSWTALVSGYAKFG 355
H + G + + AL+ Y KC + D+ RLF E + + VSWTA++SG+ +
Sbjct: 321 LHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQND 380
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
E + LF +M G++P+E T +L+A ++ + +++ Y
Sbjct: 381 GKEEAVGLFSEMKRKGVRPNEFTYSVILTALP---VISPSEVHAQVVKTNYERSSTVG-- 435
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
T ++D + G+++EA + + D + W+ +L+ G E
Sbjct: 436 TALLDAYVKLGKVDEAAKVFSGID-NKDIVAWSAMLAGYAQAGETE 480
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/465 (25%), Positives = 232/465 (49%), Gaps = 48/465 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + V+W LISG+A + S+N+ V + ++D + TF+ L + +
Sbjct: 158 MKERNVVTWTTLISGYARN-SLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGR 216
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+H ++K G + V + L+++Y L+
Sbjct: 217 GLQVHTVVVKNGLDKTIPVSNSLINLY-------------------------------LK 245
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G V ++R LF + K ++W +MI+G NGL+ EA+ +F MRL + + + +F S+
Sbjct: 246 CGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASI 305
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW-KN 239
+ C L L +Q+H +++ + + +AL+ Y KC ++ A +F+ + N
Sbjct: 306 IKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGN 365
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VVSWTAM+ G+ QN EEAV +F M+R G+ P++FT ++++ ++ ++ H
Sbjct: 366 VVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISP----SEVHA 421
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ + T TV AL+ Y K G ++++ ++F+ ++ +D V+W+A+++GYA+ G+
Sbjct: 422 QVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEA 481
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSAC-SRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC- 417
I +F ++ G+KP+E T +L+ C + + +G+ + + I+ D C
Sbjct: 482 AIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQF-----HGFAIKSRLDSSLCV 536
Query: 418 ---MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
++ + ++ G +E A+ + K D + W +++S HG
Sbjct: 537 SSALLTMYAKKGHIESAEE-VFKRQREKDLVSWNSMISGYAQHGQ 580
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 161/324 (49%), Gaps = 3/324 (0%)
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
LF D+D S+T+++ G ++G +EA LF ++ G+ MD F SVL L
Sbjct: 53 LFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCD 112
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
G+Q+H I+ D+V VG++LVD Y K + K +VF M +NVV+WT ++ G
Sbjct: 113 ELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISG 172
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
Y +N +EE + +F MQ G +P+ FT + + A G Q H + GL
Sbjct: 173 YARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT 232
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
I VSN+L+ Y KCGN+ + LF++ V+ V+W +++SGYA G E + +F M
Sbjct: 233 IPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRL 292
Query: 370 HGLKPDEVTLIGVLSACSRAGLVE-KGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
+ ++ E + ++ C A L E + V +YG + T ++ S+ +
Sbjct: 293 NHVRLSESSFASIIKLC--ANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAM 350
Query: 429 EEAKSFINKMPFPPDAIGWATLLS 452
+A + F + + W ++S
Sbjct: 351 LDALRLFKETGFLGNVVSWTAMIS 374
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 139/294 (47%), Gaps = 14/294 (4%)
Query: 227 YAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCA 286
YA ++F ++ S+T++L G+ ++G ++EA ++F N+Q G+E D SV+ A
Sbjct: 49 YAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSA 108
Query: 287 NLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTA 346
L G Q H + + G + ++V +LV Y K N +D +F+EM R+ V+WT
Sbjct: 109 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTT 168
Query: 347 LVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY 406
L+SGYA+ E + LF +M G +P+ T L + G+ +G ++VK
Sbjct: 169 LISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN- 227
Query: 407 GIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWA 466
G+ +I++ + G + +A+ +K + W +++S +G
Sbjct: 228 GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKS-VVTWNSMISGYAANG-------- 278
Query: 467 AESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKY 520
L+L+ + L+ + S+ + + +L ++E + CS +KY
Sbjct: 279 ----LDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKY 328
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 40/236 (16%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTML-IMSSSRRCVDLGRQ 63
D V+W+ +++G+A G A+K+++ + K G+ + TFS++L + +++ + G+Q
Sbjct: 462 DIVAWSAMLAGYAQAGETEAAIKIFSELTKGGV-KPNEFTFSSILNVCAATTASMGQGKQ 520
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
HG +K S + V S L+ MYAK G I A+ F EK++V +N+MI+G
Sbjct: 521 FHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISG------ 574
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
Q+G +A+D+F+EM+ + MD TF V A
Sbjct: 575 -------------------------YAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAA 609
Query: 184 CGGLLALEEGKQIHAFIIRN----DHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
C +EEG++ ++R+ K++ S +VD+Y + ++ A V M
Sbjct: 610 CTHAGLVEEGEKYFDIMVRDCKIAPTKEH---NSCMVDLYSRAGQLEKAMKVIDNM 662
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/640 (38%), Positives = 379/640 (59%), Gaps = 34/640 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLM-LKDGLGNLSRITFSTMLIMSSSRRCVDLGRQ 63
D V W+ LI+ G +++K+++LM L D L N + T ++L +++ + G+
Sbjct: 379 DIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPN--QYTICSLLSAATNTGNLQYGQS 436
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
IH + K+GF + V V + LV MY ++ G
Sbjct: 437 IHACVWKYGFETDVAVSNALVTMY-------------------------------MKNGC 465
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
V + +L+ M D+D ISW ++GL G+ + +F M EG + +TF S+L +
Sbjct: 466 VHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGS 525
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C L + G+Q+HA II+N DN FV +AL+DMY KC ++ A+ F ++ +++ +W
Sbjct: 526 CSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTW 585
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
T ++ Y Q E+A+ F MQ+ G++P++FTL +S C++LASLE G Q H
Sbjct: 586 TVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFK 645
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
+G +S + V +ALV Y KCG +E++ LF + RD ++W ++ GYA+ G+ N+ +
Sbjct: 646 SGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTA 705
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F ML G+ PD VT G+LSACS GLVE+G+ +F M +++GI P DH CM+DIL
Sbjct: 706 FRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILG 765
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
R G+ +E + FI KM +A+ W T+L + ++H N+ +G+ AA L EL P +SY+L
Sbjct: 766 RVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYIL 825
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LS+I+A++G+WD V ++R M KGV+K+PGCSW++ +VH F + D+S P +I+ +
Sbjct: 826 LSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLK 885
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
L++L+R++ YVP VLH+V +EK + L HSE+LA+ F L+ IR+ KN
Sbjct: 886 LDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKN 945
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSC 643
LR+C DCH+ K+IS IT +EI+VRD RFH FKNG CSC
Sbjct: 946 LRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSC 985
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 137/455 (30%), Positives = 223/455 (49%), Gaps = 38/455 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSW LI G + G ND++ ++ M +G+ + T +T L S +DL
Sbjct: 173 MPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMP-NEFTLATGLKACSLCMALDL 231
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H K G +FVGS LVD+YAK G I
Sbjct: 232 GKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEI--------------------------- 264
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
E + ++F GM +++ ++W ++ G Q G + LF M + ++FT +V
Sbjct: 265 ----ELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTV 320
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C L++G+ IH+ II+ ++ N F+G LVDMY KC A VF+T+ ++
Sbjct: 321 LKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDI 380
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V W+A++ Q G SEE++K+F M+ P+ +T+ S++S+ N +L+ G H
Sbjct: 381 VVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHAC 440
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
G + + VSNALVT Y K G + D +L+ M RD +SW A +SG G +
Sbjct: 441 VWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRP 500
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC--M 418
+ +F ML G P+ T I +L +CS V GR ++K + +++ C +
Sbjct: 501 LTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKN---QLDDNNFVCTAL 557
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
ID+ ++ LE+A N++ D W ++++
Sbjct: 558 IDMYAKCMYLEDADVAFNRLSV-RDLFTWTVIITN 591
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 130/451 (28%), Positives = 225/451 (49%), Gaps = 34/451 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+WN+L++G+A G V +K++ M++ + + T +T+L ++ + +
Sbjct: 274 MPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDV-KCNEFTLTTVLKGCANSKNLKQ 332
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ IH I+K G+ F+G LVDMY+K GL DA
Sbjct: 333 GQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIG---------------------- 370
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+F+ +K D + W+ +IT L Q G E+I LF MRL +Q+T S+
Sbjct: 371 ---------VFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSL 421
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+A L+ G+ IHA + + + +V V +ALV MY K + ++ +M +++
Sbjct: 422 LSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDL 481
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SW A L G G + + IF +M G P+ +T S++ SC+ L + G Q H
Sbjct: 482 ISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAH 541
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ L V AL+ Y KC +ED+ FN ++VRD +WT +++ YA+ + +
Sbjct: 542 IIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKA 601
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++ F +M G+KP+E TL G LS CS +E G+ ++ K + + + ++D
Sbjct: 602 LNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVG-SALVD 660
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
+ ++ G +EEA++ + D I W T++
Sbjct: 661 MYAKCGCMEEAEALFEAL-IRRDTIAWNTII 690
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 197/408 (48%), Gaps = 33/408 (8%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
+S+ML +S+R + + + IHG I+K + LV++YAK Y A
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCR--YSAY------- 165
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
+R + M D+D +SWT +I GL+ G ++I LF+E
Sbjct: 166 ----------------------ARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQE 203
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M+ EG+ ++FT + L AC +AL+ GKQ+HA + ++FVGSALVD+Y KC
Sbjct: 204 MQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGE 263
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
I+ A +F M +N V+W +L GY Q G +K+FC+M ++ ++FTL +V+
Sbjct: 264 IELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKG 323
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
CAN +L++G H + G + LV Y KCG D+ +F + D V W
Sbjct: 324 CANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVW 383
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
+AL++ + G++ E+I LF M P++ T+ +LSA + G ++ G+ V
Sbjct: 384 SALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQS-IHACVW 442
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+YG ++ + + G + + M D I W LS
Sbjct: 443 KYGFETDVAVSNALVTMYMKNGCVHDGTKLYESM-VDRDLISWNAYLS 489
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 153/286 (53%), Gaps = 4/286 (1%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
+ S+L C +L K IH I+++ + + +LV++Y KC+ YA V M
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
++VVSWTA++ G G + +++ +F MQ GI P++FTL + + +C+ +L+ G Q
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H ++ GL+ + V +ALV Y KCG IE + ++F M +++V+W L++GYA+ G
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
+ LF M+ +K +E TL VL C+ + +++G+ +++K G ++
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIK-CGYEG-NEFIG 352
Query: 417 C-MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
C ++D+ S+ G +A + PD + W+ L++ G E
Sbjct: 353 CGLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALITCLDQQGQSE 397
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 247/610 (40%), Positives = 375/610 (61%), Gaps = 32/610 (5%)
Query: 39 NLSRITF-STMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAK 97
N + ++F +L + + R+ + G+ H IL G + + + L++MY+K G
Sbjct: 60 NATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGS----- 114
Query: 98 RGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLERE 157
V+ +R++F M + +SW TMI L QNG E E
Sbjct: 115 --------------------------VDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENE 148
Query: 158 AIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVD 217
A+DL +M+ EG +FT SVL AC AL E + +HAF I+ NVFV +AL+D
Sbjct: 149 ALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLD 208
Query: 218 MYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFT 277
+Y KC +K A VF +M ++VV+W++M GY QN E+A+ +F G++ D F
Sbjct: 209 VYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFL 268
Query: 278 LGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN 337
+ SVI +CA LA++ EG Q + +G S I V+++L+ Y KCG IE+S+++F ++
Sbjct: 269 MSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVE 328
Query: 338 VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH 397
R+ V W A++SG ++ ++ E + LFEKM GL P++VT + VLSAC GLV+KG+
Sbjct: 329 KRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQK 388
Query: 398 YFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIH 457
YF++M KE+ + P HY+CM+D LSRAG++ EA I+K+PF A W +LL+SCR H
Sbjct: 389 YFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTH 448
Query: 458 GNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSW 517
GN+E+ + AA+ L +++P+N +Y+LLS++YA+ GKWD V+++R+ ++E V+K+ G SW
Sbjct: 449 GNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESDVKKERGKSW 508
Query: 518 IKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLN 577
I+ K +VH+F + + P +IY++L ++ ++ K GY + LH V S K ++L
Sbjct: 509 IEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHDLHQVGESIKQELLR 568
Query: 578 HHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFK 637
HHSEKLA GLLF+PP PIR++KNLR+C DCH+ K SK R+++VRD RFH FK
Sbjct: 569 HHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLASKFFCRDVIVRDTNRFHHFK 628
Query: 638 NGECSCGDFW 647
NG CSCGDFW
Sbjct: 629 NGCCSCGDFW 638
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 159/297 (53%), Gaps = 32/297 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP VSWN +I +G N+A+ + M ++G S T S++L +++ +
Sbjct: 125 MPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTP-FSEFTISSVLCACAAKCALSE 183
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+ +H +K VFV + L+D+YAK GL+ DA F+ +P++++V +++M G ++
Sbjct: 184 CQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQ 243
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ E++ LFR +W T GL DQF SV
Sbjct: 244 NEMYEQALALFRK-------AWET------------------------GLKHDQFLMSSV 272
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ AC GL A+ EGKQ++A + ++ N+FV S+L+DMY KC I+ + VFR + +NV
Sbjct: 273 ICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNV 332
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
V W AM+ G ++ S E + +F MQ+ G+ P+D T SV+S+C ++ +++G ++
Sbjct: 333 VLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKY 389
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 122/256 (47%), Gaps = 34/256 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP V+W+ + +G+ + A+ ++ + GL + + S+++ + +
Sbjct: 226 MPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKH-DQFLMSSVICACAGLAAMIE 284
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q++ + K GF S +FV S L+DMYAK G I ++ + F ++ ++N+V++N MI+GL R
Sbjct: 285 GKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSR 344
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+R L E + LF +M+ GL+ + TF SV
Sbjct: 345 H-----ARSL--------------------------EVMILFEKMQQMGLSPNDVTFVSV 373
Query: 181 LTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
L+ACG + +++G++ + + H NVF S +VD + I A + + +
Sbjct: 374 LSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNA 433
Query: 240 VVS-WTAMLVGYGQNG 254
S W ++L +G
Sbjct: 434 SASMWGSLLASCRTHG 449
>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 693
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 242/605 (40%), Positives = 379/605 (62%), Gaps = 1/605 (0%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
T+ ++ + S R ++ G+++H HI GF + + + ++ MYAK G + DA++ FDE+
Sbjct: 89 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKCGSLVDARKVFDEM 148
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
PE+++ +N M+ G GL+EE+R LF M ++DS SWT M+TG ++ EA+ L+
Sbjct: 149 PERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSWTAMVTGYVKKDQPEEALVLYS 208
Query: 164 EM-RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC 222
M R+ + FT S + A + + GK+IH I+R + + S+L+DMY KC
Sbjct: 209 LMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKC 268
Query: 223 KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
I A ++F + K+VVSWT+M+ Y ++ E +F + + P+++T V+
Sbjct: 269 GCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVL 328
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
++CA+L + E G Q HG G + S++L+ Y KCGNIE + + + D V
Sbjct: 329 NACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLV 388
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
S T+L+ GYA+ GK +E + F+ +L G KPD VT + VLSAC+ AGLVEKG +F +
Sbjct: 389 SLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSI 448
Query: 403 VKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
+++ + DHYTC++D+L+R+GR E+ KS +++MP P WA++L C +GN+++
Sbjct: 449 TEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYGNIDL 508
Query: 463 GKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKS 522
+ AA+ L +++P NP +YV +++IYA+ GKW+ ++R+ M+E G+ K PG SW + K
Sbjct: 509 AEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGITKKPGSSWTEIKR 568
Query: 523 RVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEK 582
+ H+F A D S P +QI L +L +KM +EGYVP S VLHDVE +K + L +HSEK
Sbjct: 569 KRHVFIAADTSHPMYNQIIEFLGELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEK 628
Query: 583 LAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECS 642
LA+AF +L G I+V KNLR C DCH+A K+ISKIT+R+I +RD+ RFH F+NG+CS
Sbjct: 629 LAVAFAILSTEEGTAIKVFKNLRSCVDCHSAIKFISKITKRKITIRDSTRFHCFENGQCS 688
Query: 643 CGDFW 647
C D+W
Sbjct: 689 CRDYW 693
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 201/438 (45%), Gaps = 66/438 (15%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SW +++G+ +A+ +Y+LM + + T S+ + +++ +C+
Sbjct: 179 MPERDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRR 238
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G++IHGHI++ G S + S L+DMY K G I +A+ FD++ +K++V
Sbjct: 239 GKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVV----------- 287
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SWT+MI ++ RE LF E+ +++TF V
Sbjct: 288 --------------------SWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGV 327
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L E G+Q+H ++ R F S+L+DMY KC +I+ A V ++
Sbjct: 328 LNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDL 387
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VS T+++ GY QNG +EA+K F + ++G +PD T +V+S+C + +E+G +F
Sbjct: 388 VSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEF--- 444
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
FY +I + H L + + +T LV A+ G+ +
Sbjct: 445 ------------------FY----SITEKHDLTHTSD-----HYTCLVDLLARSGRFEQL 477
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ +M +KP + VL CS G ++ + + K P+ Y M +
Sbjct: 478 KSVLSEM---PMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPV--TYVTMAN 532
Query: 421 ILSRAGRLEEAKSFINKM 438
I + AG+ EE +M
Sbjct: 533 IYAAAGKWEEEGKMRKRM 550
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 104/238 (43%), Gaps = 49/238 (20%)
Query: 258 EAVKIFCNMQ--RNGIE-------PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
EA+ + C + R ++ P T ++I C+ +LEEG + H +G +
Sbjct: 61 EAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVP 120
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
I + N ++ Y KCG++ D+ ++F+EM RD SW +V+GYA+ G E +LF++M
Sbjct: 121 GIVIWNRILGMYAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMP 180
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP------------------ 410
D + +++ + E+ + +M + +P
Sbjct: 181 ER----DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCI 236
Query: 411 -----IHDH------------YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
IH H ++ ++D+ + G ++EA++ +K+ D + W +++
Sbjct: 237 RRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI-IDKDVVSWTSMI 293
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 247/610 (40%), Positives = 374/610 (61%), Gaps = 32/610 (5%)
Query: 39 NLSRITF-STMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAK 97
N + ++F +L + + R+ + G+ H IL G + + + L++MY+K G
Sbjct: 60 NATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGS----- 114
Query: 98 RGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLERE 157
V+ +R++F M + +SW TMI L QNG E E
Sbjct: 115 --------------------------VDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENE 148
Query: 158 AIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVD 217
A+DL +M+ EG +FT SVL AC AL E + +HAF I+ NVFV +AL+D
Sbjct: 149 ALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLD 208
Query: 218 MYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFT 277
+Y KC +K A VF +M ++VV+W++M GY QN E+A+ +F G++ D F
Sbjct: 209 VYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFL 268
Query: 278 LGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN 337
+ SVI +CA LA++ EG Q + +G S I V+++L+ Y KCG IE+S+++F ++
Sbjct: 269 MSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVE 328
Query: 338 VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH 397
R+ V W A++SG ++ ++ E + LFEKM GL P++VT + VLSAC GLV KG+
Sbjct: 329 KRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQK 388
Query: 398 YFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIH 457
YF++M KE+ + P HY+CM+D LSRAG++ EA I+K+PF A W +LL+SCR H
Sbjct: 389 YFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTH 448
Query: 458 GNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSW 517
GN+E+ + AA+ L +++P+N +Y+LLS++YA+ GKWD V+++R+ ++E V+K+ G SW
Sbjct: 449 GNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESDVKKERGKSW 508
Query: 518 IKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLN 577
I+ K +VH+F + + P +IY++L ++ ++ K GY + LH V S K ++L
Sbjct: 509 IEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHDLHQVGESIKQELLR 568
Query: 578 HHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFK 637
HHSEKLA GLLF+PP PIR++KNLR+C DCH+ K SK R+++VRD RFH FK
Sbjct: 569 HHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLASKFFCRDVIVRDTNRFHHFK 628
Query: 638 NGECSCGDFW 647
NG CSCGDFW
Sbjct: 629 NGCCSCGDFW 638
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 158/297 (53%), Gaps = 32/297 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP VSWN +I +G N+A+ + M ++G S T S++L +++ +
Sbjct: 125 MPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTP-FSEFTISSVLCACAAKCALSE 183
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+ +H +K VFV + L+D+YAK GL+ DA F+ +P++++V +++M G ++
Sbjct: 184 CQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQ 243
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ E++ LFR +W T GL DQF SV
Sbjct: 244 NEMYEQALALFRK-------AWET------------------------GLKHDQFLMSSV 272
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ AC GL A+ EGKQ++A + ++ N+FV S+L+DMY KC I+ + VFR + +NV
Sbjct: 273 ICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNV 332
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
V W AM+ G ++ S E + +F MQ+ G+ P+D T SV+S+C ++ + +G ++
Sbjct: 333 VLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKY 389
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 121/256 (47%), Gaps = 34/256 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP V+W+ + +G+ + A+ ++ + GL + + S+++ + +
Sbjct: 226 MPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKH-DQFLMSSVICACAGLAAMIE 284
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q++ + K GF S +FV S L+DMYAK G I ++ + F ++ ++N+V++N MI+GL R
Sbjct: 285 GKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSR 344
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+R L E + LF +M+ GL+ + TF SV
Sbjct: 345 H-----ARSL--------------------------EVMILFEKMQQMGLSPNDVTFVSV 373
Query: 181 LTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
L+ACG + + +G++ + + H NVF S +VD + I A + + +
Sbjct: 374 LSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNA 433
Query: 240 VVS-WTAMLVGYGQNG 254
S W ++L +G
Sbjct: 434 SASMWGSLLASCRTHG 449
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 265/656 (40%), Positives = 382/656 (58%), Gaps = 43/656 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VS+N LI+ +A G ++++ + + LG L T S ++ V L
Sbjct: 101 IPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLG-LDGFTLSGVITACGDD--VGL 157
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
RQ+H ++ G Y V + ++ Y+ R
Sbjct: 158 VRQLHCFVVVCGHDCYASVNNAVLACYS-------------------------------R 186
Query: 121 RGLVEESRRLFRGMKD---KDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
+G + E+RR+FR M + +D +SW MI Q+ EA+ LFREM GL +D FT
Sbjct: 187 KGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTM 246
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK-SIKYAESVFRTMA 236
SVLTA + L G+Q H +I++ N VGS L+D+Y KC S+ VF +
Sbjct: 247 ASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEIT 306
Query: 237 WKNVVSWTAMLVGYG-QNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
++V W M+ G+ SE+ + F MQRNG PDD + V S+C+NL+S G
Sbjct: 307 APDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGK 366
Query: 296 QFHGRSLVTGL-ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
Q H ++ + + + ++V+NALV Y KCGN+ D+ R+F+ M + VS ++++GYA+
Sbjct: 367 QVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQH 426
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G E++ LFE ML + P+ +T I VLSAC G VE+G+ YF +M + + I P +H
Sbjct: 427 GVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEH 486
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
Y+CMID+L RAG+L+EA+ I MPF P +I WATLL +CR HGNVE+ AA L L+
Sbjct: 487 YSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLE 546
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS 534
PYN A YV+LS++YAS +W+ + ++R MRE+GV+K PGCSWI+ +VH+F A+D S
Sbjct: 547 PYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSH 606
Query: 535 PYSDQIYAELEKLNRKMIKEGYVPDMSSVL---HDVELSEKIKMLNHHSEKLAIAFGLLF 591
P +I+ + K+ +KM + GYVPD+ L +VE E+ + L +HSEKLA+AFGL+
Sbjct: 607 PMIKEIHVYMGKMLKKMKQAGYVPDIRWALVKDEEVEPDERERRLLYHSEKLAVAFGLIS 666
Query: 592 IPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G+PI VVKNLR+C DCHNA K IS +T REI VRD RFH FK G CSC D+W
Sbjct: 667 TEEGVPILVVKNLRICGDCHNAVKLISALTGREITVRDTHRFHCFKEGHCSCRDYW 722
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 257/648 (39%), Positives = 399/648 (61%), Gaps = 36/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSWN L++G + +A+++++ + +G +++ T++T++ + ++ + + L
Sbjct: 262 METRDMVSWNTLMAGLQLNECELEALQLFHES-RATMGKMTQSTYATVIKLCANLKQLAL 320
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
RQ+H +LK GF V + L D Y+K G + DA F +M TG
Sbjct: 321 ARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIF------------SMTTG--- 365
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
++ +SWT +I+G +QNG A+ LF MR + + ++FT+ ++
Sbjct: 366 ---------------SRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAM 410
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A +L QIHA +I+ +++ VG+AL+ Y K S + A S+F+ + K+V
Sbjct: 411 LKASLSILP----PQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDV 466
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCA-NLASLEEGTQFHG 299
V+W+AML + Q G E A +F M GI+P++FT+ SVI +CA A +++G QFH
Sbjct: 467 VAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHA 526
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
S+ I VS+ALV+ Y + GNI+ + +F RD VSW +++SGYA+ G + +
Sbjct: 527 ISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMK 586
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
I+ F +M + G++ D VT + V+ C+ GLV +G+ YF+ MV+++ I P +HY CM+
Sbjct: 587 AIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMV 646
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+ SRAG+L+E S I MPFP A+ W TLL +CR+H NVE+GK++A+ LL L+P++ +
Sbjct: 647 DLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSS 706
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+YVLLS+IYA+ GKW ++R+ M + V+K+ GCSWI+ K++VH F A D S P SDQ
Sbjct: 707 TYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQ 766
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY +L+ + ++ ++GY P+ S VLHD+ +K ML HSE+LA+AFGL+ PPG P++
Sbjct: 767 IYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQ 826
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+VKNLRVC DCH K +S I REI++RD RFH F G CSCGDFW
Sbjct: 827 IVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDFW 874
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 138/464 (29%), Positives = 237/464 (51%), Gaps = 48/464 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+W L++G A ++ + ++ M +G+ + TF+++L +S+ +DL
Sbjct: 161 MPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWP-NPFTFASVLSAVASQGALDL 219
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+++H +KFG S VFV + L++MYAK GL
Sbjct: 220 GQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGL---------------------------- 251
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
VE+++ +F M+ +D +SW T++ GL N E EA+ LF E R M Q T+ +V
Sbjct: 252 ---VEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATV 308
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR-TMAWKN 239
+ C L L +Q+H+ ++++ V +AL D Y KC + A ++F T +N
Sbjct: 309 IKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRN 368
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VVSWTA++ G QNG AV +F M+ + + P++FT +++ A+L+ L Q H
Sbjct: 369 VVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLK--ASLSILPP--QIHA 424
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ + T +V AL+ Y K G+ ED+ +F + +D V+W+A++S +A+ G
Sbjct: 425 QVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEG 484
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACS--RAGLVEKGRHYFEIMVKEYGIRPIHDHY-- 415
LF KM G+KP+E T+ V+ AC+ AG V++GR + I +K HD
Sbjct: 485 ATYLFNKMAIQGIKPNEFTISSVIDACACPSAG-VDQGRQFHAISIKYR----YHDAICV 539
Query: 416 -TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ ++ + SR G ++ A+ + D + W +++S HG
Sbjct: 540 SSALVSMYSRKGNIDSAQIVFERQT-DRDLVSWNSMISGYAQHG 582
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 133/471 (28%), Positives = 213/471 (45%), Gaps = 55/471 (11%)
Query: 1 MPFHDG-VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
+P D V N ++ +A G V + + +++ + G+ + T S +L S
Sbjct: 58 IPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGV-LVDSATLSCVLKACRSVPDRV 116
Query: 60 LGRQIHGHILKFGFG-SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
LG Q+H +K G V G+ LVDMY K G +
Sbjct: 117 LGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVC------------------------ 152
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
E +F GM K+ ++WT+++TG + E + LF MR EG+ + FTF
Sbjct: 153 -------EGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFA 205
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
SVL+A AL+ G+++HA ++ + +VFV ++L++MY KC ++ A+SVF M +
Sbjct: 206 SVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETR 265
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
++VSW ++ G N C EA+++F + + T +VI CANL L Q H
Sbjct: 266 DMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLH 325
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN-EMNVRDEVSWTALVSGYAKFGKA 357
L G V AL Y KCG + D+ +F+ R+ VSWTA++SG + G
Sbjct: 326 SCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDI 385
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY-- 415
+ LF +M + P+E T +L A I+ + + I +Y
Sbjct: 386 PLAVVLFSRMREDRVMPNEFTYSAMLKA------------SLSILPPQIHAQVIKTNYQH 433
Query: 416 -----TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
T ++ S+ G E+A S I KM D + W+ +LS G+ E
Sbjct: 434 IPSVGTALLASYSKFGSTEDALS-IFKMIEQKDVVAWSAMLSCHAQAGDCE 483
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 155/314 (49%), Gaps = 2/314 (0%)
Query: 151 QNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH-KDNV 209
+ G+ E +D F R G+ +D T VL AC + G+Q+H ++ H + V
Sbjct: 76 RRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEV 135
Query: 210 FVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN 269
G++LVDMY KC S+ VF M KNVV+WT++L G E + +F M+
Sbjct: 136 SAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAE 195
Query: 270 GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
GI P+ FT SV+S+ A+ +L+ G + H +S+ G S + V N+L+ Y KCG +ED+
Sbjct: 196 GIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDA 255
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
+FN M RD VSW L++G E + LF + + K + T V+ C+
Sbjct: 256 KSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANL 315
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
+ R ++K +G + T + D S+ G L +A + + + + W
Sbjct: 316 KQLALARQLHSCVLK-HGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTA 374
Query: 450 LLSSCRIHGNVEIG 463
++S C +G++ +
Sbjct: 375 IISGCIQNGDIPLA 388
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Vitis vinifera]
Length = 1058
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 252/678 (37%), Positives = 392/678 (57%), Gaps = 72/678 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + SW +I+ A G ++DA+++Y R+ T
Sbjct: 422 MPERNEYSWTTMIAAFAQCGRLDDAIQLY-----------ERVPEQT------------- 457
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
V + ++ YA++G I A+ FDE+ N+V +N +I G +
Sbjct: 458 ----------------VATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQ 501
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G+++E++ LF+ M K+S SW MI G +QN REA++L E+ G +F S
Sbjct: 502 NGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSA 561
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM----- 235
L+AC + +E G+ IH+ I+ + N +V + L+ MY KC +++ VFRT+
Sbjct: 562 LSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDT 621
Query: 236 -AW-------------------------KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN 269
+W ++VVSWTA++ Y Q G E A+ +F +M
Sbjct: 622 VSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLAR 681
Query: 270 GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
GI+P+ T+ S++S+C NL +++ G QFH G +F+ V N+L+T Y KCG ED
Sbjct: 682 GIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDG 740
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
+F EM D ++W A++ G A+ G E I +FE+M G+ PD+++ +GVL ACS A
Sbjct: 741 FCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHA 800
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
GLV++G +F M ++YGI P+ HYTCM+D+L RAG L EA++ I MP PD++ W
Sbjct: 801 GLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEA 860
Query: 450 LLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
LL +CRIH NVE+G+ AE L ++ A+YVLLS+++AS+G WD V+++R+ M+++G+
Sbjct: 861 LLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGL 920
Query: 510 RKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVEL 569
K+PG SWI+ K+++H F D + ++IY+ L++ GY+PD + VLHDVE
Sbjct: 921 TKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDTNFVLHDVEE 980
Query: 570 SEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRD 629
+K L +HSEKLA+ FG+L P G PI+++KNLR+C DCH K++SK+T R+I++RD
Sbjct: 981 EQKQNELLYHSEKLAVVFGILSTPNGSPIQIIKNLRICGDCHTFMKFMSKVTLRKIIIRD 1040
Query: 630 AVRFHLFKNGECSCGDFW 647
RFH F++G CSCGD+W
Sbjct: 1041 GNRFHHFRDGSCSCGDYW 1058
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/508 (23%), Positives = 253/508 (49%), Gaps = 22/508 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSWN +I+G++ +G V++A +++ + + T++ +L + ++ R++
Sbjct: 201 DVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIR-----TWTILLTGYAKEGRIEEAREV 255
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
+ + S+ + ++ Y + G + +A++ FDE+PEKN+ +N+++TG +
Sbjct: 256 FESMTERNVVSW----NAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRM 311
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
E+R LF M +++S+SW MI+G + EA D+F +M DQ F VL+A
Sbjct: 312 SEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAI 371
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
GL LE + I+ ++ +V VGSA+++ Y + S+ A F TM +N SWT
Sbjct: 372 TGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWT 431
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
M+ + Q G ++A++++ + + T +++++ A + +++ L
Sbjct: 432 TMIAAFAQCGRLDDAIQLYERVPEQTVA----TKTAMMTAYAQVGRIQKARLIFDEILNP 487
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
++++ NA++ Y + G ++++ LF +M V++ SW A+++G+ + ++ E ++L
Sbjct: 488 NVVAW----NAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELL 543
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
++ G P + + LSAC+ G VE GR + +K G + +I + ++
Sbjct: 544 IELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKT-GCQFNSYVMNGLISMYAK 602
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
G +E+ S + + D + W +L+S + ++ + E + + D S+ +
Sbjct: 603 CGNVEDG-SHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRD---VVSWTAI 658
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKD 512
S Y G + L M +G++ +
Sbjct: 659 ISAYVQAGHGEVALDLFLDMLARGIKPN 686
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 217/471 (46%), Gaps = 58/471 (12%)
Query: 75 SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGM 134
+++F + + +LG + +A+R F+E+ ++++V +N+MI G + G V+E+R LF
Sbjct: 169 THLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAF 228
Query: 135 KDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGK 194
K+ +WT ++TG + G EA ++F M + ++ ++++ ++ G
Sbjct: 229 VGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVV----SWNAMISG-----YVQNGD 279
Query: 195 QIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQN 253
+A + ++ + NV +++V YC C + A +F M +N VSW M+ GY
Sbjct: 280 LKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHI 339
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVS 313
EA +F M R PD V+S+ L LE ++ TG + V
Sbjct: 340 SDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVG 399
Query: 314 NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLK 373
+A++ Y + G+++ + F M R+E SWT +++ +A+ G+ ++ I L+E++ +
Sbjct: 400 SAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTV- 458
Query: 374 PDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKS 433
T +++A ++ G ++K R F+ + + P + +I ++ G L+EAK
Sbjct: 459 ---ATKTAMMTAYAQVGRIQKARLIFDEI-----LNPNVVAWNAIIAGYTQNGMLKEAKD 510
Query: 434 FINKMPFPPDAIGWATL-----------------------------------LSSCRIHG 458
KMP A WA + LS+C G
Sbjct: 511 LFQKMPVKNSA-SWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIG 569
Query: 459 NVEIGKWAAESLLELDPYNPASYVL--LSSIYASKGKWDHVSQLRRTMREK 507
+VEIG+ SL SYV+ L S+YA G + S + RT+R K
Sbjct: 570 DVEIGR-VIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVK 619
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/588 (41%), Positives = 358/588 (60%), Gaps = 31/588 (5%)
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G +HG I++ G ++ G+ L++MY+KL I ++ F+ +P K++V YNT+I G
Sbjct: 123 FGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYA 182
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ G+ E++ R+ R M D L D FT S
Sbjct: 183 QSGMYEDALRMVREMGTSD-------------------------------LKPDAFTLSS 211
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL + + +GK+IH ++IR +V++GS+LVDMY K I+ +E VF + ++
Sbjct: 212 VLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRD 271
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+SW +++ GY QNG EA+++F M + P SVI +CA+LA+L G Q HG
Sbjct: 272 SISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHG 331
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
L G I +++ALV Y KCGNI+ + ++F+ MN+ DEVSWTA++ G+A G +E
Sbjct: 332 YVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHE 391
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ LFE+M G+KP++V + VL+ACS GLV++ YF M K YG+ +HY +
Sbjct: 392 AVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVA 451
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L RAG+LEEA FI+KM P W+TLLSSC +H N+E+ + AE + +D N
Sbjct: 452 DLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMG 511
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+YVL+ ++YAS G+W +++LR +R+KG+RK P CSWI+ K++ H F + D S P D+
Sbjct: 512 AYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDR 571
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
I L+ + +M KEGYV D S VLHDV+ K ++L HSE+LA+AFG++ PG IR
Sbjct: 572 INEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIR 631
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V KN+R+C+DCH A K+ISKIT+REI+VRD RFH F G CSCGD+W
Sbjct: 632 VTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGSCSCGDYW 679
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 196/371 (52%), Gaps = 42/371 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VS+N +I+G+A G DA+++ M G +L F+ ++ VD+
Sbjct: 166 MPRKDVVSYNTVIAGYAQSGMYEDALRMVREM---GTSDLKPDAFTLSSVLPIFSEYVDV 222
Query: 61 --GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G++IHG++++ G S V++GS LVDMYAK I
Sbjct: 223 LKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARI------------------------- 257
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
E+S R+F + +DSISW +++ G +QNG EA+ LFR+M + F
Sbjct: 258 ------EDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFS 311
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
SV+ AC L L GKQ+H +++R N+F+ SALVDMY KC +I+ A +F M
Sbjct: 312 SVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLH 371
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQF 297
+ VSWTA+++G+ +G EAV +F M+R G++P+ +V+++C+++ ++E F
Sbjct: 372 DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYF 431
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGK 356
+ + V GL + A+ G+ G +E+++ ++M V S W+ L+S +
Sbjct: 432 NSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCS---- 487
Query: 357 ANETIDLFEKM 367
++ ++L EK+
Sbjct: 488 VHKNLELAEKV 498
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 180/337 (53%), Gaps = 2/337 (0%)
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
L+ E+ +F+ ++ ++W ++I L A+ F EMR G D F SVL
Sbjct: 54 LLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLK 113
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
+C ++ L G+ +H FI+R +++ G+AL++MY K I VF M K+VVS
Sbjct: 114 SCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVS 173
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL 302
+ ++ GY Q+G E+A+++ M + ++PD FTL SV+ + + +G + HG +
Sbjct: 174 YNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVI 233
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
G+ S + + ++LV Y K IEDS R+F+ + RD +SW +LV+GY + G+ NE +
Sbjct: 234 RKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALR 293
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL 422
LF +M+S ++P V V+ AC+ + G+ +++ R I + ++D+
Sbjct: 294 LFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFI-ASALVDMY 352
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
S+ G ++ A+ ++M D + W ++ +HG+
Sbjct: 353 SKCGNIQAARKIFDRMNL-HDEVSWTAIIMGHALHGH 388
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 136/276 (49%), Gaps = 12/276 (4%)
Query: 192 EGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYG 251
+ KQ+HA IR + S ++ +Y K + A VF+T+ V++W +++ +
Sbjct: 23 QAKQLHAQFIRTQSLSHT-SASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFT 81
Query: 252 QNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFIT 311
A+ F M+ +G PD SV+ SC + L G HG + G+ +
Sbjct: 82 DQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLY 141
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG 371
NAL+ Y K I+ ++F M +D VS+ +++GYA+ G + + + +M +
Sbjct: 142 TGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSD 201
Query: 372 LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--TCMIDILSRAGRLE 429
LKPD TL VL S V KG+ ++++ GI D Y + ++D+ +++ R+E
Sbjct: 202 LKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRK-GIDS--DVYIGSSLVDMYAKSARIE 258
Query: 430 EAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKW 465
+++ + + + D+I W +L++ G V+ G++
Sbjct: 259 DSERVFSHL-YRRDSISWNSLVA-----GYVQNGRY 288
>gi|218546768|sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
Length = 650
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 247/636 (38%), Positives = 393/636 (61%), Gaps = 6/636 (0%)
Query: 13 ISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFG 72
I+ S G++ +A + + L + N S F+ + ++R+ + G+Q+H ++ G
Sbjct: 20 IATLCSKGNLREAFQRFRLNI---FTNTS--LFTPFIQSCTTRQSLPSGKQLHCLLVVSG 74
Query: 73 FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFR 132
F S F+ + L+ MY+KLG A + + +KN + N +I G +R G + +R++F
Sbjct: 75 FSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFD 134
Query: 133 GMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEE 192
M D+ +W MI GL+Q E + LFREM G + D++T GSV + GL ++
Sbjct: 135 EMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSI 194
Query: 193 GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
G+QIH + I+ + ++ V S+L MY + ++ E V R+M +N+V+W +++G Q
Sbjct: 195 GQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQ 254
Query: 253 NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITV 312
NGC E + ++ M+ +G P+ T +V+SSC++LA +G Q H ++ G S + V
Sbjct: 255 NGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAV 314
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH-G 371
++L++ Y KCG + D+ + F+E DEV W++++S Y G+ +E I+LF M
Sbjct: 315 VSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTN 374
Query: 372 LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEA 431
++ +EV + +L ACS +GL +KG F++MV++YG +P HYTC++D+L RAG L++A
Sbjct: 375 MEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQA 434
Query: 432 KSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASK 491
++ I MP D + W TLLS+C IH N E+ + + +L++DP + A YVLL++++AS
Sbjct: 435 EAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASA 494
Query: 492 GKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKM 551
+W VS++R++MR+K V+K+ G SW ++K VH F D S S +IY+ L++L +M
Sbjct: 495 KRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEM 554
Query: 552 IKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCH 611
+GY PD +SVLHD++ EK L HSEKLA+AF L+ +P G PIR++KNLRVCSDCH
Sbjct: 555 KLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCH 614
Query: 612 NATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
A KYIS I REI +RD RFH F NG+CSCGD+W
Sbjct: 615 VAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 650
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 169/372 (45%), Gaps = 37/372 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLG-NLSRITFSTMLIMSSSRRCVD 59
MP +WN +I+G + + ++ M GLG + T ++ S+ R V
Sbjct: 136 MPDRKLTTWNAMIAGLIQFEFNEEGLSLFREM--HGLGFSPDEYTLGSVFSGSAGLRSVS 193
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+G+QIHG+ +K+G + V S L MY + G + D + +P +N+V +NT+I
Sbjct: 194 IGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLI---- 249
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
G QNG + L++ M++ G ++ TF +
Sbjct: 250 ---------------------------MGNAQNGCPETVLYLYKMMKISGCRPNKITFVT 282
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL++C L +G+QIHA I+ V V S+L+ MY KC + A F ++
Sbjct: 283 VLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDED 342
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
V W++M+ YG +G +EA+++F M ++ +E ++ +++ +C++ ++G +
Sbjct: 343 EVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELF 402
Query: 299 GRSLVT-GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGK 356
+ G + +V G+ G ++ + + M ++ D V W L+S
Sbjct: 403 DMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKN 462
Query: 357 ANETIDLFEKML 368
A +F+++L
Sbjct: 463 AEMAQRVFKEIL 474
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 132/281 (46%), Gaps = 43/281 (15%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+WN LI G+A +G + +Y +M G ++ITF T+L S
Sbjct: 237 MPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGC-RPNKITFVTVLSSCSDLAIRGQ 295
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIH +K G S V V S L+ MY+K G + DA + F E +++ VM+++MI+
Sbjct: 296 GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGF 355
Query: 121 RGLVEESRRLFRGMKDK-----DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
G +E+ LF M ++ + +++ ++ +GL+ + ++LF M ++++
Sbjct: 356 HGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMM------VEKY 409
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
F K + + +VD+ + + AE++ R+M
Sbjct: 410 GF----------------------------KPGLKHYTCVVDLLGRAGCLDQAEAIIRSM 441
Query: 236 AWK-NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDD 275
K ++V W +L + +E A ++F + + I+P+D
Sbjct: 442 PIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ--IDPND 480
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 252/596 (42%), Positives = 365/596 (61%), Gaps = 35/596 (5%)
Query: 55 RRCVDL--GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYN 112
+ C DL G++IH +LK GF VFV + LV MY++ GL+ DA
Sbjct: 5 KACGDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDA---------------- 48
Query: 113 TMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM 172
R+LF M +D SW MI+G QNG EA+D+ EMRLEG+ M
Sbjct: 49 ---------------RKLFDDMPARDRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKM 93
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
D T SVL C + + GK IH ++I++ + +FV +AL++MY K S+ +A+ VF
Sbjct: 94 DAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVF 153
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASL 291
+ K+VVSW ++ GY QNG + EA++++ M+ + I P+ T S++ + +++ +L
Sbjct: 154 GLLI-KDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGAL 212
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
++G + HG+ + L S + V L+ YGKCG ++D+ LF ++ ++ V W A++S Y
Sbjct: 213 QQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCY 272
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
G + ++LF +M + +KPD +T + +LSACS +GLV + F +M +EYGI+P
Sbjct: 273 GVHGDGEKALELFREMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPS 332
Query: 412 HDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL 471
HY CM+D+ RAG LE A +FI KMP PDA W LL++CRIHGN+E+GK A+E L
Sbjct: 333 LKHYGCMVDLFGRAGELEMAFNFIKKMPIQPDASAWGALLNACRIHGNIELGKHASERLF 392
Query: 472 ELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADD 531
E+D N YVLLS+IYA+ GKW+ V +R R++G+RK+PG S I ++V +F +
Sbjct: 393 EVDSENVGYYVLLSNIYANVGKWEGVDDVRSLARDRGLRKNPGWSSIILNNKVDVFYTGN 452
Query: 532 WSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLF 591
+ P ++IY EL L K+ GYVPD VL DVE EK +L HSE+LAIA+G++
Sbjct: 453 QTHPKCEEIYRELRDLTSKIKTIGYVPDFCFVLQDVEEDEKEHILMGHSERLAIAYGIIS 512
Query: 592 IPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
P PIR+ KNLRVC DCH TK+IS IT+REI+VRD+ RFH FK G CSCGD+W
Sbjct: 513 TSPKTPIRIFKNLRVCGDCHTVTKFISIITEREIIVRDSSRFHHFKGGTCSCGDYW 568
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 158/283 (55%), Gaps = 7/283 (2%)
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
V+ ACG LL +GK+IH +++ + +VFV ++LV MY + + A +F M ++
Sbjct: 3 VVKACGDLL---DGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARD 59
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
SW AM+ GY QNG + EA+ I M+ G++ D T+ SV+ CA + + G H
Sbjct: 60 RGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHL 119
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ GL + VSNAL+ Y K G++ + ++F + ++D VSW L++GYA+ G A+E
Sbjct: 120 YVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLL-IKDVVSWNTLITGYAQNGLASE 178
Query: 360 TIDLFEKMLSH-GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
I+++ M H + P++ T + +L A S G +++G ++K + TC+
Sbjct: 179 AIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVG-TCL 237
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
ID+ + G+L++A S ++P +++ W ++S +HG+ E
Sbjct: 238 IDMYGKCGKLDDAISLFYQVP-RKNSVPWNAMISCYGVHGDGE 279
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 94/168 (55%), Gaps = 4/168 (2%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSWN LI+G+A +G ++A++VY LM + ++ T+ ++L S + G +I
Sbjct: 159 DVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRI 218
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG ++K S VFVG+ L+DMY K G + DA F ++P KN V +N MI+ G
Sbjct: 219 HGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDG 278
Query: 125 EESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLE 168
E++ LFR MK + D I++ ++++ +GL +A F M E
Sbjct: 279 EKALELFREMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMMEEE 326
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 255/647 (39%), Positives = 379/647 (58%), Gaps = 32/647 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN LISG +G + A+++ M GL + T S++L S DL
Sbjct: 263 MPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVP-NVFTLSSILKACSGAGAFDL 321
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQIHG ++K S ++G LVDMYAK + DA
Sbjct: 322 GRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDA------------------------ 357
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
R++F M +D I +I+G G EA+ LF E+R EGL +++ T +V
Sbjct: 358 -------RKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAV 410
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L + L A +Q+HA ++ + V + L+D Y KC + A VF + ++
Sbjct: 411 LKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDI 470
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
++ T+M+ Q E A+K+F M R G+EPD F L S++++CA+L++ E+G Q H
Sbjct: 471 IACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAH 530
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ +S NALV Y KCG+IED+ F+ + R VSW+A++ G A+ G
Sbjct: 531 LIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRA 590
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++LF +M+ G+ P+ +T+ VL AC+ AGLV++ + YF M + +GI +HY+CMID
Sbjct: 591 LELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMID 650
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG+L++A +N MPF +A W LL + R+H + E+GK AAE L L+P +
Sbjct: 651 LLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGT 710
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
+VLL++ YAS G W+ V+++R+ M++ ++K+P SWI+ K +VH F D S P + +I
Sbjct: 711 HVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEI 770
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
YA+L +L M K G+VP++ LHD++ SEK +L+HHSE+LA+AF LL PPG PIRV
Sbjct: 771 YAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRV 830
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLR+C DCH A K+ISKI REI++RD RFH F++G CSCGD+W
Sbjct: 831 KKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 135/508 (26%), Positives = 246/508 (48%), Gaps = 45/508 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
+ VSWN L+S + + DA++V+ M+ G+ + FS ++ + R ++ GRQ+
Sbjct: 166 NAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGI-QPTEFGFSCVVNACTGSRNIEAGRQV 224
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +++ G+ VF + LVDMY K+ G V
Sbjct: 225 HAMVVRMGYDKDVFTANALVDMYMKM-------------------------------GRV 253
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ + +F M D D +SW +I+G + NG + AI+L +M+ GL + FT S+L AC
Sbjct: 254 DIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKAC 313
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G A + G+QIH F+I+ + + ++G LVDMY K + A VF M ++++
Sbjct: 314 SGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCN 373
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
A++ G G +EA+ +F +++ G+ + TL +V+ S A+L + Q H ++
Sbjct: 374 ALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKI 433
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G I V N L+ Y KC + D++R+F E + D ++ T++++ ++ I LF
Sbjct: 434 GFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLF 493
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT--CMIDIL 422
+ML GL+PD L +L+AC+ E+G+ ++K + + D + ++
Sbjct: 494 MEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR---QFMSDAFAGNALVYTY 550
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL--DPYNPAS 480
++ G +E+A+ + +P + W+ ++ HG+ GK A E + + NP
Sbjct: 551 AKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLAQHGH---GKRALELFGRMVDEGINPNH 606
Query: 481 YVLLSSIYASK--GKWDHVSQLRRTMRE 506
+ S + A G D + +M+E
Sbjct: 607 ITMTSVLCACNHAGLVDEAKRYFNSMKE 634
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 143/542 (26%), Positives = 239/542 (44%), Gaps = 70/542 (12%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P H VSW+ L++ ++++G A++ ++ M +G+ + +L R LG
Sbjct: 66 PCH--VSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVC-CNEFALPVVLKCVPDAR---LG 119
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
Q+H + GFGS VFV + LV MY G + DA+R F+E
Sbjct: 120 AQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADS---------------- 163
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
+++++SW +++ ++N +AI +F EM G+ +F F V+
Sbjct: 164 --------------ERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVV 209
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
AC G +E G+Q+HA ++R + +VF +ALVDMY K + A +F M +VV
Sbjct: 210 NACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVV 269
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW A++ G NG A+++ M+ +G+ P+ FTL S++ +C+ + + G Q HG
Sbjct: 270 SWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFM 329
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ S + LV Y K ++D+ ++F+ M RD + AL+SG + G+ +E +
Sbjct: 330 IKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEAL 389
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH------DHY 415
LF ++ GL + TL VL + + R + VK I H D Y
Sbjct: 390 SLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSY 449
Query: 416 ------------------------TCMIDILSRAGRLEEAKSFINKM---PFPPDAIGWA 448
T MI LS+ E A +M PD +
Sbjct: 450 WKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLS 509
Query: 449 TLLSSCRIHGNVEIGKWAAESLLELDPYNPA-SYVLLSSIYASKGKWDHVSQLRRTMREK 507
+LL++C E GK L++ + A + L YA G + ++ E+
Sbjct: 510 SLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPER 569
Query: 508 GV 509
GV
Sbjct: 570 GV 571
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 166/335 (49%), Gaps = 11/335 (3%)
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+RR+F + D +SW++++T NGL R AI F MR EG+ ++F VL
Sbjct: 56 ARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC--- 112
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM-AWKNVVSWTA 245
+ G Q+HA + +VFV +ALV MY + A VF + +N VSW
Sbjct: 113 VPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNG 172
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
++ Y +N +A+++F M +GI+P +F V+++C ++E G Q H + G
Sbjct: 173 LMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMG 232
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
+ +NALV Y K G ++ + +F +M D VSW AL+SG G + I+L
Sbjct: 233 YDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLL 292
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--TCMIDILS 423
+M GL P+ TL +L ACS AG + GR M+K D Y ++D+ +
Sbjct: 293 QMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKA---NADSDDYIGVGLVDMYA 349
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ L++A+ + M F D I L+S C HG
Sbjct: 350 KNHFLDDARKVFDWM-FHRDLILCNALISGCS-HG 382
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 144/285 (50%), Gaps = 8/285 (2%)
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
T LT AL G +HA ++++ + + L+ Y KC+ A VF +
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKSGSLASF--RNHLISFYSKCRRPCCARRVFDEI 63
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
VSW++++ Y NG A++ F M+ G+ ++F L V+ C A L G
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFAL-PVVLKCVPDARL--GA 120
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALVSGYAKF 354
Q H ++ TG S + V+NALV YG G ++D+ R+FNE + R+ VSW L+S Y K
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKN 180
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
+ + I +F +M+ G++P E V++AC+ + +E GR ++V+ + +
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFT- 239
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
++D+ + GR++ A KMP D + W L+S C ++G+
Sbjct: 240 ANALVDMYMKMGRVDIASVIFEKMP-DSDVVSWNALISGCVLNGH 283
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 261/646 (40%), Positives = 378/646 (58%), Gaps = 35/646 (5%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P + V+W LI+ + A+ +N M G+ + TFS +L + + G
Sbjct: 161 PSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYP-NHFTFSAILPACAHAALLSEG 219
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+QIH I K F + FV + L+DMYAK G + A+ FDE+P +N+V
Sbjct: 220 QQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLV------------ 267
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
SW +MI G ++N L AI +FRE+ L DQ + SVL
Sbjct: 268 -------------------SWNSMIVGFVKNKLYGRAIGVFREVL--SLGPDQVSISSVL 306
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+AC GL+ L+ GKQ+H I++ V+V ++LVDMYCKC + A +F ++VV
Sbjct: 307 SACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVV 366
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
+W M++G + E+A F M R G+EPD+ + S+ + A++A+L +GT H
Sbjct: 367 TWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHV 426
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
L TG + +S++LVT YGKCG++ D++++F E + V WTA+++ + + G ANE I
Sbjct: 427 LKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAI 486
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
LFE+ML+ G+ P+ +T + VLSACS G ++ G YF M + I+P +HY CM+D+
Sbjct: 487 KLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDL 546
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
L R GRLEEA FI MPF PD++ W LL +C H NVE+G+ AE L +L+P NP +Y
Sbjct: 547 LGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAERLFKLEPDNPGNY 606
Query: 482 VLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIY 541
+LLS+IY G + ++RR M GVRK+ GCSWI K+R +F+A+D S + +IY
Sbjct: 607 MLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSWIDVKNRTFVFNANDRSHSRTQEIY 666
Query: 542 AELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVV 601
L+KL + + GYV + + VE SE+ + L HSEKLA+AFGLL +PPG P+R+
Sbjct: 667 GMLQKLKELIKRRGYVAETQFATNSVEGSEE-QSLWCHSEKLALAFGLLVLPPGSPVRIK 725
Query: 602 KNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLR C DCH K+ S+I QREI+VRD RFH F NG CSC D+W
Sbjct: 726 KNLRTCGDCHTVMKFASEIFQREIIVRDINRFHRFTNGSCSCMDYW 771
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 136/501 (27%), Positives = 224/501 (44%), Gaps = 63/501 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSWN +I G + A+ V+ +L G +++ S++L + +D
Sbjct: 261 MPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLGP---DQVSISSVLSACAGLVELDF 317
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+HG I+K G V+V + LVDMY K GL DA
Sbjct: 318 GKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDAT----------------------- 354
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+LF G D+D ++W MI G + +A F+ M EG+ D+ ++ S+
Sbjct: 355 --------KLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSL 406
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
A + AL +G IH+ +++ H N + S+LV MY KC S+ A VFR NV
Sbjct: 407 FHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNV 466
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
V WTAM+ + Q+GC+ EA+K+F M G+ P+ T SV+S+C++ +++G + F+
Sbjct: 467 VCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNS 526
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKAN 358
+ V + + +V G+ G +E++ R M D + W AL+ K
Sbjct: 527 MANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVE 586
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACS-RAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
++ E++ L+PD +LS R G++E+ +M GI + C
Sbjct: 587 MGREVAERLFK--LEPDNPGNYMLLSNIYIRHGMLEEADEVRRLM----GINGVRKESGC 640
Query: 418 M-IDILSRA----------GRLEEAKSFINKMPFPPDAIGWA--TLLSSCRIHGNVEIGK 464
ID+ +R R +E + K+ G+ T ++ + G+ E
Sbjct: 641 SWIDVKNRTFVFNANDRSHSRTQEIYGMLQKLKELIKRRGYVAETQFATNSVEGSEEQSL 700
Query: 465 WA-------AESLLELDPYNP 478
W A LL L P +P
Sbjct: 701 WCHSEKLALAFGLLVLPPGSP 721
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 95/183 (51%), Gaps = 11/183 (6%)
Query: 273 PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRL 332
PD L ++++ A L SL+ TQ H + + T + + N L+ Y KCG+I + L
Sbjct: 98 PD---LKHLLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLL 154
Query: 333 FNEM--NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
FN + V+WT L++ ++ K + + F +M + G+ P+ T +L AC+ A
Sbjct: 155 FNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAA 214
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
L+ +G+ ++ K ++D + T ++D+ ++ G + A++ ++MP + + W
Sbjct: 215 LLSEGQQIHALIHKHCF---LNDPFVATALLDMYAKCGSMLLAENVFDEMPH-RNLVSWN 270
Query: 449 TLL 451
+++
Sbjct: 271 SMI 273
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 255/647 (39%), Positives = 379/647 (58%), Gaps = 32/647 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN LISG +G + A+++ M GL + T S++L S DL
Sbjct: 263 MPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVP-NVFTLSSILKACSGAGAFDL 321
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQIHG ++K S ++G LVDMYAK + DA
Sbjct: 322 GRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDA------------------------ 357
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
R++F M +D I +I+G G EA+ LF E+R EGL +++ T +V
Sbjct: 358 -------RKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAV 410
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L + L A +Q+HA ++ + V + L+D Y KC + A VF + ++
Sbjct: 411 LKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDI 470
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
++ T+M+ Q E A+K+F M R G+EPD F L S++++CA+L++ E+G Q H
Sbjct: 471 IACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAH 530
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ +S NALV Y KCG+IED+ F+ + R VSW+A++ G A+ G
Sbjct: 531 LIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRA 590
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++LF +M+ G+ P+ +T+ VL AC+ AGLV++ + YF M + +GI +HY+CMID
Sbjct: 591 LELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMID 650
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG+L++A +N MPF +A W LL + R+H + E+GK AAE L L+P +
Sbjct: 651 LLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGT 710
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
+VLL++ YAS G W+ V+++R+ M++ ++K+P SWI+ K +VH F D S P + +I
Sbjct: 711 HVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEI 770
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
YA+L +L M K G+VP++ LHD++ SEK +L+HHSE+LA+AF LL PPG PIRV
Sbjct: 771 YAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRV 830
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLR+C DCH A K+ISKI REI++RD RFH F++G CSCGD+W
Sbjct: 831 KKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 135/508 (26%), Positives = 246/508 (48%), Gaps = 45/508 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
+ VSWN L+S + + DA++V+ M+ G+ + FS ++ + R ++ GRQ+
Sbjct: 166 NAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGI-QPTEFGFSCVVNACTGSRNIEAGRQV 224
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +++ G+ VF + LVDMY K+ G V
Sbjct: 225 HAMVVRMGYDKDVFTANALVDMYMKM-------------------------------GRV 253
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ + +F M D D +SW +I+G + NG + AI+L +M+ GL + FT S+L AC
Sbjct: 254 DIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKAC 313
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G A + G+QIH F+I+ + + ++G LVDMY K + A VF M ++++
Sbjct: 314 SGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCN 373
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
A++ G G +EA+ +F +++ G+ + TL +V+ S A+L + Q H ++
Sbjct: 374 ALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKI 433
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G I V N L+ Y KC + D++R+F E + D ++ T++++ ++ I LF
Sbjct: 434 GFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLF 493
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT--CMIDIL 422
+ML GL+PD L +L+AC+ E+G+ ++K + + D + ++
Sbjct: 494 MEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR---QFMSDAFAGNALVYTY 550
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL--DPYNPAS 480
++ G +E+A+ + +P + W+ ++ HG+ GK A E + + NP
Sbjct: 551 AKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLAQHGH---GKRALELFGRMVDEGINPNH 606
Query: 481 YVLLSSIYASK--GKWDHVSQLRRTMRE 506
+ S + A G D + +M+E
Sbjct: 607 ITMTSVLCACNHAGLVDEAKRYFNSMKE 634
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 143/542 (26%), Positives = 239/542 (44%), Gaps = 70/542 (12%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P H VSW+ L++ ++++G A++ ++ M +G+ + +L R LG
Sbjct: 66 PCH--VSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVC-CNEFALPVVLKCVPDAR---LG 119
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
Q+H + GFGS VFV + LV MY G + DA+R F+E
Sbjct: 120 AQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADS---------------- 163
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
+++++SW +++ ++N +AI +F EM G+ +F F V+
Sbjct: 164 --------------ERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVV 209
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
AC G +E G+Q+HA ++R + +VF +ALVDMY K + A +F M +VV
Sbjct: 210 NACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVV 269
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW A++ G NG A+++ M+ +G+ P+ FTL S++ +C+ + + G Q HG
Sbjct: 270 SWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFM 329
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ S + LV Y K ++D+ ++F+ M RD + AL+SG + G+ +E +
Sbjct: 330 IKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEAL 389
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH------DHY 415
LF ++ GL + TL VL + + R + VK I H D Y
Sbjct: 390 SLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSY 449
Query: 416 ------------------------TCMIDILSRAGRLEEAKSFINKM---PFPPDAIGWA 448
T MI LS+ E A +M PD +
Sbjct: 450 WKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLS 509
Query: 449 TLLSSCRIHGNVEIGKWAAESLLELDPYNPA-SYVLLSSIYASKGKWDHVSQLRRTMREK 507
+LL++C E GK L++ + A + L YA G + ++ E+
Sbjct: 510 SLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPER 569
Query: 508 GV 509
GV
Sbjct: 570 GV 571
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 165/335 (49%), Gaps = 11/335 (3%)
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+RR F + D +SW++++T NGL R AI F MR EG+ ++F VL
Sbjct: 56 ARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC--- 112
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM-AWKNVVSWTA 245
+ G Q+HA + +VFV +ALV MY + A VF + +N VSW
Sbjct: 113 VPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNG 172
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
++ Y +N +A+++F M +GI+P +F V+++C ++E G Q H + G
Sbjct: 173 LMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMG 232
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
+ +NALV Y K G ++ + +F +M D VSW AL+SG G + I+L
Sbjct: 233 YDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLL 292
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--TCMIDILS 423
+M GL P+ TL +L ACS AG + GR M+K D Y ++D+ +
Sbjct: 293 QMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKA---NADSDDYIGVGLVDMYA 349
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ L++A+ + M F D I L+S C HG
Sbjct: 350 KNHFLDDARKVFDWM-FHRDLILCNALISGCS-HG 382
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 143/285 (50%), Gaps = 8/285 (2%)
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
T LT AL G +HA ++++ + + L+ Y KC+ A F +
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKSGSLASF--RNHLISFYSKCRRPCCARRFFDEI 63
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
VSW++++ Y NG A++ F M+ G+ ++F L V+ C A L G
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFAL-PVVLKCVPDARL--GA 120
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALVSGYAKF 354
Q H ++ TG S + V+NALV YG G ++D+ R+FNE + R+ VSW L+S Y K
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKN 180
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
+ + I +F +M+ G++P E V++AC+ + +E GR ++V+ + +
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFT- 239
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
++D+ + GR++ A KMP D + W L+S C ++G+
Sbjct: 240 ANALVDMYMKMGRVDIASVIFEKMP-DSDVVSWNALISGCVLNGH 283
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 260/649 (40%), Positives = 382/649 (58%), Gaps = 35/649 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MPF D SWN +ISG +G+ A+ V + M +G+ ++ +T ++L + +
Sbjct: 276 MPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGI-KMNFVTVVSILPVCPQLGDIST 334
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
IH +++K G +FV + L++MYAK G +
Sbjct: 335 AMLIHLYVIKHGLEFDLFVSNALINMYAKFGNL--------------------------- 367
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
E++R+ F+ M D +SW ++I QN A F +M+L G D T S+
Sbjct: 368 ----EDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSL 423
Query: 181 LTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+ + + +H FI+R ++V +G+A+VDMY K + A VF + K+
Sbjct: 424 ASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKD 483
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQR-NGIEPDDFTLGSVISSCANLASLEEGTQFH 298
V+SW ++ GY QNG + EA++++ M+ I P+ T S++ + A++ +L++G + H
Sbjct: 484 VISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIH 543
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
GR + T L + V+ L+ YGKCG + D+ LF ++ V+W A++S + G A
Sbjct: 544 GRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAE 603
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
+T+ LF +ML G+KPD VT + +LSACS +G VE+G+ F +M +EYGI+P HY CM
Sbjct: 604 KTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCM 662
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
+D+L RAG LE A FI MP PDA W LL +CRIHGN+E+GK+A++ L E+D N
Sbjct: 663 VDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNV 722
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
YVLLS+IYA+ GKW+ V ++R RE+G++K PG S I+ +V +F + S P
Sbjct: 723 GYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCK 782
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
+IY EL L KM GY+PD S VL DVE EK +L HSE+LAIAFG++ PP PI
Sbjct: 783 EIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPI 842
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R+ KNLRVC DCHNATK+IS+ITQREI+VRD+ RFH FK+G CSCGD+W
Sbjct: 843 RIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 157/531 (29%), Positives = 265/531 (49%), Gaps = 62/531 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKV-YNLMLKDGLGNLSRITFSTML-IMSSSRRCV 58
+P D +WN +IS + +G ++A+ Y L+L + R F T ++ + V
Sbjct: 177 IPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEI----RPDFYTFPPVLKACGTLV 232
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
D GR+IH K GF VFV + L+ MY++ G A+ FD++P +++ +N MI+GL
Sbjct: 233 D-GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGL 291
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+ QNG +A+D+ EMRLEG+ M+ T
Sbjct: 292 I-------------------------------QNGNAAQALDVLDEMRLEGIKMNFVTVV 320
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
S+L C L + IH ++I++ + ++FV +AL++MY K +++ A F+ M
Sbjct: 321 SILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFIT 380
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+VVSW +++ Y QN A F MQ NG +PD TL S+ S A + H
Sbjct: 381 DVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVH 440
Query: 299 GRSLVTG-LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
G + G L+ + + NA+V Y K G ++ +H++F + V+D +SW L++GYA+ G A
Sbjct: 441 GFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLA 500
Query: 358 NETIDLFEKMLS-HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH-DHY 415
+E I++++ M + P++ T + +L A + G +++G ++K +H D +
Sbjct: 501 SEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKT----NLHLDVF 556
Query: 416 --TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE-IGKWAAESLLE 472
TC+ID+ + GRL +A S ++P ++ W ++S IHG+ E K E L E
Sbjct: 557 VATCLIDVYGKCGRLVDAMSLFYQVP-QESSVTWNAIISCHGIHGHAEKTLKLFGEMLDE 615
Query: 473 -LDPYNPASYVLLSSI----YASKGKWDHVSQLRRTMREKGVR---KDPGC 515
+ P + LLS+ + +GKW R M+E G++ K GC
Sbjct: 616 GVKPDHVTFVSLLSACSHSGFVEEGKW-----CFRLMQEYGIKPSLKHYGC 661
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 126/478 (26%), Positives = 225/478 (47%), Gaps = 50/478 (10%)
Query: 36 GLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYD 95
GLGN + L SS++ + +H ++ G +F+ + LV++YA LG +
Sbjct: 112 GLGNQNEEIDFNFLFDSSTK--TPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSL 169
Query: 96 AKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLE 155
++ FD++P+K D +W +MI+ + NG
Sbjct: 170 SRCTFDQIPQK-------------------------------DVYAWNSMISAYVHNGHF 198
Query: 156 REAIDLFREMRL-EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSA 214
EAI F ++ L + D +TF VL ACG L+ +G++IH + + + NVFV ++
Sbjct: 199 HEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLV---DGRKIHCWAFKLGFQWNVFVAAS 255
Query: 215 LVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD 274
L+ MY + A S+F M ++++ SW AM+ G QNG + +A+ + M+ GI+ +
Sbjct: 256 LIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMN 315
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN 334
T+ S++ C L + H + GL + VSNAL+ Y K GN+ED+ + F
Sbjct: 316 FVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQ 375
Query: 335 EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEK 394
+M + D VSW ++++ Y + F KM +G +PD +TL+ + S +++ +
Sbjct: 376 QMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKN 435
Query: 395 GRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
R +++ + ++D+ ++ G L+ A +P D I W TL++
Sbjct: 436 SRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPV-KDVISWNTLITGY 494
Query: 455 RIHG----NVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
+G +E+ K E E+ P N ++V + YA HV L++ M+ G
Sbjct: 495 AQNGLASEAIEVYK-MMEECKEIIP-NQGTWVSILPAYA------HVGALQQGMKIHG 544
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 255/648 (39%), Positives = 382/648 (58%), Gaps = 33/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +SWN +I+G+ S+G + V+ ML G+ + T ++ + R + L
Sbjct: 256 MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGI-EIDLATIVSVFAGCADSRLISL 314
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +H +K F + L+DMY+K G + AK
Sbjct: 315 GRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKA---------------------- 352
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+FR M D+ +S+T+MI G + GL EA+ LF EM EG++ D +T +V
Sbjct: 353 ---------VFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAV 403
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C L+EGK++H +I ND ++FV +AL+DMY KC S++ AE VF M K++
Sbjct: 404 LNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDI 463
Query: 241 VSWTAMLVGYGQNGCSEEAVKIF-CNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+SW ++ GY +N + EA+ +F ++ PD+ T+ V+ +CA+L++ ++G + HG
Sbjct: 464 ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHG 523
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ G S V+N+LV Y KCG + +H LF+++ +D VSWT +++GY G E
Sbjct: 524 YIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKE 583
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
I LF +M G++ DE++ + +L ACS +GLV++G +F IM E I P +HY C++
Sbjct: 584 AIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIV 643
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L+R G L +A FI MP PPDA W LL CRIH +V++ + AE + EL+P N
Sbjct: 644 DMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTG 703
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
YVL+++IYA KW+ V +LR+ + ++G+RK+PGCSWI+ K RV+IF A D S+P ++
Sbjct: 704 YYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEN 763
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
I A L K+ +MI+EGY P L D E EK + L HSEKLA+A G++ G IR
Sbjct: 764 IEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIR 823
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V KNLRVC DCH K++SK+T+REI++RD+ RFH FK+G CSC FW
Sbjct: 824 VTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 135/451 (29%), Positives = 230/451 (50%), Gaps = 35/451 (7%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN+L++ A G + ++ ++ M+ G+ + TFS + SS R V G Q+HG I
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGV-EMDSYTFSCVSKSFSSLRSVHGGEQLHGFI 221
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
LK GFG VG+ LV Y K + A++ FDE+ E++++ +N++I G +
Sbjct: 222 LKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV--------- 272
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
NGL + + +F +M + G+ +D T SV C
Sbjct: 273 ----------------------SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSR 310
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
+ G+ +H+ ++ + L+DMY KC + A++VFR M+ ++VVS+T+M+
Sbjct: 311 LISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIA 370
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
GY + G + EAVK+F M+ GI PD +T+ +V++ CA L+EG + H L
Sbjct: 371 GYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF 430
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
I VSNAL+ Y KCG+++++ +F+EM V+D +SW ++ GY+K ANE + LF +L
Sbjct: 431 DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLL 490
Query: 369 SHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
PDE T+ VL AC+ +KGR +++ H + ++D+ ++ G
Sbjct: 491 EEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS-LVDMYAKCGA 549
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
L A + + D + W +++ +HG
Sbjct: 550 LLLAHMLFDDIA-SKDLVSWTVMIAGYGMHG 579
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 216/432 (50%), Gaps = 36/432 (8%)
Query: 20 GSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFV 79
G++ +AVK L+ G ++ T ++L + + + + G+++ I GF +
Sbjct: 75 GNLENAVK---LLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNL 131
Query: 80 GSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDS 139
GS L MY G + +A R FDE+ K + +
Sbjct: 132 GSKLSLMYTNCGDLKEASRVFDEV-------------------------------KIEKA 160
Query: 140 ISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAF 199
+ W ++ L ++G +I LF++M G+ MD +TF V + L ++ G+Q+H F
Sbjct: 161 LFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGF 220
Query: 200 IIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEA 259
I+++ + VG++LV Y K + + A VF M ++V+SW +++ GY NG +E+
Sbjct: 221 ILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG 280
Query: 260 VKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTF 319
+ +F M +GIE D T+ SV + CA+ + G H + N L+
Sbjct: 281 LSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDM 340
Query: 320 YGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTL 379
Y KCG+++ + +F EM+ R VS+T++++GYA+ G A E + LFE+M G+ PD T+
Sbjct: 341 YSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 400
Query: 380 IGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP 439
VL+ C+R L+++G+ E +KE + ++D+ ++ G ++EA+ ++M
Sbjct: 401 TAVLNCCARYRLLDEGKRVHE-WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR 459
Query: 440 FPPDAIGWATLL 451
D I W T++
Sbjct: 460 V-KDIISWNTII 470
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 250/648 (38%), Positives = 384/648 (59%), Gaps = 33/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VS+N +I+G++ G AV ++ M GL + TF+ +L + + L
Sbjct: 210 MPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGL-KPTEFTFAAVLCANIGLDDIVL 268
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIH ++K F VFV + L+D Y+K + DA
Sbjct: 269 GQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDA------------------------ 304
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
R+LF M ++D +S+ +I+G +G + A DLFRE++ QF F ++
Sbjct: 305 -------RKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATM 357
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+ L E G+QIHA I + VG++LVDMY KC + AE +F + ++
Sbjct: 358 LSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSA 417
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V WTAM+ Y Q G EE +++F M++ + D T S++ + A++ASL G Q H
Sbjct: 418 VPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSF 477
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ +G +S + +AL+ Y KCG+I+D+ + F EM R+ VSW A++S YA+ G+A T
Sbjct: 478 IIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEAT 537
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ F++M+ GL+PD V+ +GVLSACS +GLVE+G +F M + Y + P +HY ++D
Sbjct: 538 LKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVD 597
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY-NPA 479
+L R+GR EA+ + +MP PD I W+++L++CRIH N E+ + AA+ L ++ + A
Sbjct: 598 MLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAA 657
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
YV +S+IYA+ G+W++VS++ + MR++GV+K P SW++ K H+FSA+D P ++
Sbjct: 658 PYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEE 717
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
I +++ L + M + GY PD S LH+ + K++ L +HSE+LAIAF L+ P G PI
Sbjct: 718 IRKKIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPIL 777
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V+KNLR C DCH A K ISKI REI VRD+ RFH F++G CSCGDFW
Sbjct: 778 VMKNLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 825
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 125/420 (29%), Positives = 212/420 (50%), Gaps = 2/420 (0%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
TF + S + +++ I I+K GF + V + K G + A++ F+++
Sbjct: 19 TFLKSSSLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKM 78
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
P KN V N MI+G ++ G + E+R+LF GM ++ +++WT +I G Q +EA +LF
Sbjct: 79 PHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFV 138
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
+M+ G D TF ++L+ C G + Q+ II+ + + VG+ LVD YCK
Sbjct: 139 QMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSN 198
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
+ A +F+ M + VS+ AM+ GY ++G E+AV +F MQ +G++P +FT +V+
Sbjct: 199 RLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLC 258
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+ L + G Q H + T + + VSNAL+ FY K ++ D+ +LF+EM +D VS
Sbjct: 259 ANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVS 318
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
+ ++SGYA GK DLF ++ + +LS S E GR +
Sbjct: 319 YNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTI 378
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
I ++D+ ++ G+ EEA+ + A+ W ++S+ G E G
Sbjct: 379 VTTADSEILVG-NSLVDMYAKCGKFEEAEMIFTNLTH-RSAVPWTAMISAYVQKGFYEEG 436
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 239/605 (39%), Positives = 372/605 (61%), Gaps = 33/605 (5%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
+ ++L S+ + G+++H H++K + V++ + L+ +Y K + DA+R DE+P
Sbjct: 13 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 72
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
E+N+ +SWT MI+G Q G EA+ LF E
Sbjct: 73 ERNV-------------------------------VSWTAMISGYSQRGYASEALHLFVE 101
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M + G A ++FTF +VLT+C + G+QIH+ +I+ + ++FVGS+L+DMY K
Sbjct: 102 MLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGK 161
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
I A VF + ++VVS TA++ GY Q G EEA+ +F +QR G+ + T SV+++
Sbjct: 162 ICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTA 221
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
+ LA+L+ G Q H L L ++ + N+L+ Y KCG++ S R+F+ M R +SW
Sbjct: 222 LSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISW 281
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRH-YFEIM 402
A++ GY+K G E ++LF+ M +KPD VT + VLS CS G+ ++G ++E++
Sbjct: 282 NAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMV 341
Query: 403 VKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
++ G P +HY C++D+ RAGR+EEA FI KMPF P A W +LL +CR+H NV I
Sbjct: 342 NQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHI 401
Query: 463 GKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKS 522
G++ A LLE++ N +YV+LS++YAS G+WD V +R M+EK V K+PG SWI+
Sbjct: 402 GEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQ 461
Query: 523 RVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEK 582
+H F A D S P ++++A++ +L+ K+ + GYVP++S VL+DV+ +K K+L HSEK
Sbjct: 462 TLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEK 521
Query: 583 LAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECS 642
LA+AFGL+ P G P+R++KNLR+C DCHN K++S++ RE+ +RD RFH G CS
Sbjct: 522 LALAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCS 581
Query: 643 CGDFW 647
CGD+W
Sbjct: 582 CGDYW 586
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/352 (33%), Positives = 190/352 (53%), Gaps = 36/352 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW +ISG++ G ++A+ ++ ML G + TF+T+L +S L
Sbjct: 71 MPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAP-NEFTFATVLTSCTSSSGFQL 129
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQIH ++K F S++FVGS L+DMYAK G I +A+R FD LPE+++V +I+G +
Sbjct: 130 GRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQ 189
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL EE A+DLFR ++ EG+ + T+ SV
Sbjct: 190 LGLDEE-------------------------------ALDLFRRLQREGMRSNYVTYASV 218
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LTA GL AL+ G+Q+H+ ++R V + ++L+DMY KC S+ Y+ +F +M + V
Sbjct: 219 LTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTV 278
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQ--F 297
+SW AMLVGY ++G EAV++F M + N ++PD T +V+S C++ + G + +
Sbjct: 279 ISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFY 338
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALV 348
+ G I +V +G+ G +E++ +M + W +L+
Sbjct: 339 EMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLL 390
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 167/308 (54%), Gaps = 13/308 (4%)
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M ++GL ++ + SVLT C A+ EG+++HA +I+ ++ V++ + L+ +Y KC+
Sbjct: 1 MGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRC 60
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A V M +NVVSWTAM+ GY Q G + EA+ +F M +G P++FT +V++S
Sbjct: 61 LGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTS 120
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
C + + + G Q H + T S I V ++L+ Y K G I ++ R+F+ + RD VS
Sbjct: 121 CTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSC 180
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
TA++SGYA+ G E +DLF ++ G++ + VT VL+A S ++ GR V
Sbjct: 181 TAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQ-----VH 235
Query: 405 EYGIRPIHDHYTC----MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
+ +R Y +ID+ S+ G L ++ + MP I W +L HG
Sbjct: 236 SHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMP-ERTVISWNAMLVGYSKHG-- 292
Query: 461 EIGKWAAE 468
+G+ A E
Sbjct: 293 -LGREAVE 299
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 254/678 (37%), Positives = 396/678 (58%), Gaps = 63/678 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +S+ LI G+A +A++++ + ++G L+ F+T+L + S C +L
Sbjct: 99 MPERNTISFVTLIQGYAESVRFLEAIELFVRLHREG-HELNPFVFTTILKLLVSTDCGEL 157
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G IH I K G S FVG+ L+D Y+ G
Sbjct: 158 GWGIHACIFKLGHESNAFVGTALIDAYSVCGR---------------------------- 189
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
V+ +R +F G+ KD +SWT M+T +N +EA+ LF +MR+ G + FTF SV
Sbjct: 190 ---VDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASV 246
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
AC GL A + GK +H +++ ++ +++VG AL+D+Y K I A F + K+V
Sbjct: 247 FKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDV 306
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+ W+ M+ Y Q+ S+EAV++F M++ + P+ FT SV+ +CA + L G Q H
Sbjct: 307 IPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCH 366
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ GL S + VSNAL+ Y KCG +E+S LF E R++V+W ++ G+ + G +
Sbjct: 367 VIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKA 426
Query: 361 IDLFEKMLSH-------------------------------GLKPDEVTLIGVLSACSRA 389
+ LF ML + +KPD++T +GVLSAC+ A
Sbjct: 427 LRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKPDKLTFVGVLSACANA 486
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
GL+++G+ YF M++++GI P +HYTCM+ +L R G L++A I+++PF P + W
Sbjct: 487 GLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRA 546
Query: 450 LLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
LL +C IH ++E+G+ +A+ +LE++P + A++VLLS++YA+ +WD+V+ +R+ M+ KGV
Sbjct: 547 LLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGV 606
Query: 510 RKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVEL 569
+K+PG SWI+ + VH F+ D S P I LE L+ K K GY+P+ + VL DVE
Sbjct: 607 KKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVED 666
Query: 570 SEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRD 629
EK ++L HSE+LA++FG++ P G PIR++KNLR+C DCH A K ISK+ QREI+VRD
Sbjct: 667 EEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRD 726
Query: 630 AVRFHLFKNGECSCGDFW 647
RFH F+ G CSCGD+W
Sbjct: 727 INRFHHFQEGLCSCGDYW 744
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 219/442 (49%), Gaps = 53/442 (11%)
Query: 32 MLKDGLGNLSRITFSTMLIMSSSRRCVD-----LGRQIHGHILKFGFGSYVFVGSPLVDM 86
+ ++ +G++S F++ ++ + C+ G+ +H ILK G +F + L++M
Sbjct: 23 LTQEFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNM 82
Query: 87 YAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMI 146
Y K + DA + FDE M ++++IS+ T+I
Sbjct: 83 YVKSDFLCDASKLFDE-------------------------------MPERNTISFVTLI 111
Query: 147 TGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL-----TACGGLLALEEGKQIHAFII 201
G ++ EAI+LF + EG ++ F F ++L T CG L G IHA I
Sbjct: 112 QGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGEL-----GWGIHACIF 166
Query: 202 RNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVK 261
+ H+ N FVG+AL+D Y C + A VF + +K++VSWT M+ + +N C +EA+K
Sbjct: 167 KLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALK 226
Query: 262 IFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYG 321
+F M+ G +P++FT SV +C L + + G HG +L + + V AL+ Y
Sbjct: 227 LFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYT 286
Query: 322 KCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIG 381
K G+I+D+ R F E+ +D + W+ +++ YA+ ++ E +++F +M + P++ T
Sbjct: 287 KSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFAS 346
Query: 382 VLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFP 441
VL AC+ + G V + G+ ++D+ ++ GR+E + + P
Sbjct: 347 VLQACATMEGLNLGNQ-IHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHR 405
Query: 442 PDAIGWATLLSSCRIHGNVEIG 463
D + W T+ I G+V++G
Sbjct: 406 ND-VTWNTV-----IVGHVQLG 421
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 10/211 (4%)
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDF---TLGSVISSCANLASLEEGTQFHGRSLV 303
L+ + + G S ++ K+ + + P +F + + C G H L
Sbjct: 8 LIQFSRRGFSVQSAKLTQEFVGH-VSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILK 66
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
G + N L+ Y K + D+ +LF+EM R+ +S+ L+ GYA+ + E I+L
Sbjct: 67 RGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIEL 126
Query: 364 FEKM--LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
F ++ H L P T I L + G + G H + + G T +ID
Sbjct: 127 FVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIH---ACIFKLGHESNAFVGTALIDA 183
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
S GR++ A+ + + + D + W +++
Sbjct: 184 YSVCGRVDVAREVFDGILY-KDMVSWTGMVT 213
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 255/648 (39%), Positives = 382/648 (58%), Gaps = 33/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +SWN +I+G+ S+G + V+ ML G+ + T ++ + R + L
Sbjct: 105 MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGI-EIDLATIVSVFAGCADSRLISL 163
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +H +K F + L+DMY+K G + AK
Sbjct: 164 GRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKA---------------------- 201
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+FR M D+ +S+T+MI G + GL EA+ LF EM EG++ D +T +V
Sbjct: 202 ---------VFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAV 252
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C L+EGK++H +I ND ++FV +AL+DMY KC S++ AE VF M K++
Sbjct: 253 LNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDI 312
Query: 241 VSWTAMLVGYGQNGCSEEAVKIF-CNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+SW ++ GY +N + EA+ +F ++ PD+ T+ V+ +CA+L++ ++G + HG
Sbjct: 313 ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHG 372
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ G S V+N+LV Y KCG + +H LF+++ +D VSWT +++GY G E
Sbjct: 373 YIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKE 432
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
I LF +M G++ DE++ + +L ACS +GLV++G +F IM E I P +HY C++
Sbjct: 433 AIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIV 492
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L+R G L +A FI MP PPDA W LL CRIH +V++ + AE + EL+P N
Sbjct: 493 DMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTG 552
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
YVL+++IYA KW+ V +LR+ + ++G+RK+PGCSWI+ K RV+IF A D S+P ++
Sbjct: 553 YYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEN 612
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
I A L K+ +MI+EGY P L D E EK + L HSEKLA+A G++ G IR
Sbjct: 613 IEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIR 672
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V KNLRVC DCH K++SK+T+REI++RD+ RFH FK+G CSC FW
Sbjct: 673 VTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 720
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 135/451 (29%), Positives = 230/451 (50%), Gaps = 35/451 (7%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN+L++ A G + ++ ++ M+ G+ + TFS + SS R V G Q+HG I
Sbjct: 12 WNILMNELAKSGDFSGSIGLFKKMMSSGV-EMDSYTFSCVSKSFSSLRSVHGGEQLHGFI 70
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
LK GFG VG+ LV Y K + A++ FDE+ E++++ +N++I G +
Sbjct: 71 LKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV--------- 121
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
NGL + + +F +M + G+ +D T SV C
Sbjct: 122 ----------------------SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSR 159
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
+ G+ +H+ ++ + L+DMY KC + A++VFR M+ ++VVS+T+M+
Sbjct: 160 LISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIA 219
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
GY + G + EAVK+F M+ GI PD +T+ +V++ CA L+EG + H L
Sbjct: 220 GYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF 279
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
I VSNAL+ Y KCG+++++ +F+EM V+D +SW ++ GY+K ANE + LF +L
Sbjct: 280 DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLL 339
Query: 369 SHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
PDE T+ VL AC+ +KGR +++ H + ++D+ ++ G
Sbjct: 340 EEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS-LVDMYAKCGA 398
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
L A + + D + W +++ +HG
Sbjct: 399 LLLAHMLFDDIA-SKDLVSWTVMIAGYGMHG 428
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 176/321 (54%), Gaps = 2/321 (0%)
Query: 131 FRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLAL 190
F +K + ++ W ++ L ++G +I LF++M G+ MD +TF V + L ++
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 191 EEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGY 250
G+Q+H FI+++ + VG++LV Y K + + A VF M ++V+SW +++ GY
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 251 GQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFI 310
NG +E+ + +F M +GIE D T+ SV + CA+ + G H +
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180
Query: 311 TVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH 370
N L+ Y KCG+++ + +F EM+ R VS+T++++GYA+ G A E + LFE+M
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 240
Query: 371 GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEE 430
G+ PD T+ VL+ C+R L+++G+ E +KE + ++D+ ++ G ++E
Sbjct: 241 GISPDVYTVTAVLNCCARYRLLDEGKRVHE-WIKENDLGFDIFVSNALMDMYAKCGSMQE 299
Query: 431 AKSFINKMPFPPDAIGWATLL 451
A+ ++M D I W T++
Sbjct: 300 AELVFSEMRV-KDIISWNTII 319
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 260/648 (40%), Positives = 373/648 (57%), Gaps = 33/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V WN +I G+ G ++++++ M+ GL S +T + +L +
Sbjct: 206 MPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGL-RPSPVTMANLLKACGQSGLKKV 264
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G H ++L G G+ VFV + LVDMY+ LG A FD + +++
Sbjct: 265 GMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSL------------ 312
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
ISW MI+G +QNG+ E+ LFR + G D T S+
Sbjct: 313 -------------------ISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSL 353
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ C LE G+ +H+ IIR + + ++ + +A+VDMY KC +IK A VF M KNV
Sbjct: 354 IRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNV 413
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
++WTAMLVG QNG +E+A+K+FC MQ + + TL S++ CA+L SL +G H
Sbjct: 414 ITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAH 473
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN-EMNVRDEVSWTALVSGYAKFGKANE 359
+ G +++AL+ Y KCG I + +LFN E +++D + +++ GY G
Sbjct: 474 FIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRY 533
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ ++ +M+ LKP++ T + +L+ACS +GLVE+G+ F M +++ +RP H HY C++
Sbjct: 534 ALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLV 593
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+ SRAGRLEEA + +MPF P LLS CR H N +G A+ L+ LD N
Sbjct: 594 DLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSG 653
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
YV+LS+IYA KW+ V+ +R MR +G++K PG S I+ ++V+ F A D S P
Sbjct: 654 IYVMLSNIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPSWAD 713
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY LE L ++ EGY+PD S VL DV K+K+L HSE+LAIAFGLL P G I+
Sbjct: 714 IYQLLENLRLEVEAEGYIPDTSCVLRDVNEPMKVKLLWGHSERLAIAFGLLSTPCGSLIK 773
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ KNLRVC DCHN TKYISKI QREI+VRDA RFH F NG+CSC DFW
Sbjct: 774 ITKNLRVCVDCHNVTKYISKIVQREIIVRDANRFHHFVNGKCSCNDFW 821
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 214/418 (51%), Gaps = 11/418 (2%)
Query: 97 KRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLER 156
+RGF ++ + ++M+ L++RG + +++++F GM +KD + W ++I G +Q GL
Sbjct: 173 RRGF----HLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFW 228
Query: 157 EAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALV 216
E+I +F EM GL T ++L ACG + G H++++ ++VFV ++LV
Sbjct: 229 ESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLV 288
Query: 217 DMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDF 276
DMY A VF +M ++++SW AM+ GY QNG E+ +F + ++G D
Sbjct: 289 DMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSG 348
Query: 277 TLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
TL S+I C+ + LE G H + L S + +S A+V Y KCG I+ + +F M
Sbjct: 349 TLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRM 408
Query: 337 NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR 396
++ ++WTA++ G ++ G A + + LF +M + + VTL+ ++ C+ G + KGR
Sbjct: 409 GKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGR 468
Query: 397 HYFEIMVKE-YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCR 455
++ Y + + +ID+ ++ G++ A+ N D I +++
Sbjct: 469 TVHAHFIRHGYAFDAVIT--SALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYG 526
Query: 456 IHGNVEIGKWAAESLLE--LDPYNPASYVLLSSIYASKGKWDHVSQLRRTM-REKGVR 510
+HG+ ++E L P N ++V L + + G + L +M R+ VR
Sbjct: 527 MHGHGRYALGVYSRMIEERLKP-NQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVR 583
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 181/405 (44%), Gaps = 43/405 (10%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDE--LPEKNIVMYNTMITGLL 119
+ IH I+K + F+ + L+ +Y+ LG + A+ FD+ LPE +
Sbjct: 64 KSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVC---------- 113
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
MI G ++N E LFR M + ++ +T
Sbjct: 114 -----------------------NAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMF 150
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
L AC LL E G +I +R +++VGS++V+ K + A+ VF M K+
Sbjct: 151 ALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKD 210
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VV W +++ GY Q G E++++F M G+ P T+ +++ +C + G H
Sbjct: 211 VVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHS 270
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
L G+ + + V +LV Y G+ + +F+ M R +SW A++SGY + G E
Sbjct: 271 YVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPE 330
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY---T 416
+ LF +++ G D TL+ ++ CS+ +E GR +++ + + H T
Sbjct: 331 SYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIR----KELESHLVLST 386
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
++D+ S+ G +++A +M + I W +L +G E
Sbjct: 387 AIVDMYSKCGAIKQATIVFGRMG-KKNVITWTAMLVGLSQNGYAE 430
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 255/663 (38%), Positives = 391/663 (58%), Gaps = 16/663 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSWN +I +A G A+++++ M + IT +L +S L
Sbjct: 188 MSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSL 247
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H + +FVG+ LVDMYAK G++ +A F + K++V +N M+ G +
Sbjct: 248 GKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQ 307
Query: 121 RGLVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
G E++ RLF M+++ D ++W+ I+G Q GL EA+ + R+M G+ ++ T
Sbjct: 308 IGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVT 367
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIR-------NDHKDNVFVGSALVDMYCKCKSIKYAE 229
SVL+ C + AL GK+IH + I+ N H D V + L+DMY KCK + A
Sbjct: 368 LISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTAR 427
Query: 230 SVFRTMAWK--NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE--PDDFTLGSVISSC 285
++F +++ K +VV+WT M+ GY Q+G + +A+++ M + P+ FT+ + +C
Sbjct: 428 AMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVAC 487
Query: 286 ANLASLEEGTQFHGRSLVTGLISF-ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
A+LA+L G Q H +L + + VSN L+ Y KCG+I D+ +F+ M ++EV+W
Sbjct: 488 ASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTW 547
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
T+L++GY G E + +F++M G K D VTL+ VL ACS +G++++G YF M
Sbjct: 548 TSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKT 607
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
+G+ P +HY C++D+L RAGRL A I +MP P + W LS CRIHG VE+G+
Sbjct: 608 VFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGE 667
Query: 465 WAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRV 524
+AAE + EL + SY LLS++YA+ G+W V+++R MR KGV+K PGCSW++
Sbjct: 668 YAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGT 727
Query: 525 HIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLA 584
F D + P++ +IY L +++ GYVP+ LHDV+ EK +L HSEKLA
Sbjct: 728 TTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLA 787
Query: 585 IAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCG 644
+A+G+L P G IR+ KNLRVC DCH A Y+S+I +I++RD+ RFH FKNG CSC
Sbjct: 788 LAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCK 847
Query: 645 DFW 647
+W
Sbjct: 848 GYW 850
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 134/502 (26%), Positives = 222/502 (44%), Gaps = 90/502 (17%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN LI + +G N + ++ LM TF + V G H
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSW-TPDNYTFPFVFKACGEISSVRCGESAHALS 153
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
L GF S VFVG+ LV MY++ + DA++ FDE+ ++V
Sbjct: 154 LVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVV------------------- 194
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQFTFGSVLTACGGL 187
SW ++I + G + A+++F M E G D T +VL C L
Sbjct: 195 ------------SWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASL 242
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
GKQ+H F + ++ N+FVG+ LVDMY KC + A +VF M+ K+VVSW AM+
Sbjct: 243 GTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMV 302
Query: 248 VGYGQNGCSEEAVKIFCNMQR-----------------------------------NGIE 272
GY Q G E+AV++F MQ +GI+
Sbjct: 303 AGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIK 362
Query: 273 PDDFTLGSVISSCANLASLEEGTQFHGRSL-------VTGLISFITVSNALVTFYGKCGN 325
P++ TL SV+S CA++ +L G + H ++ G V N L+ Y KC
Sbjct: 363 PNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKK 422
Query: 326 IEDSHRLFNEMNV--RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGL--KPDEVTLIG 381
++ + +F+ ++ RD V+WT ++ GY++ G AN+ ++L +M +P+ T+
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISC 482
Query: 382 VLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY-----TCMIDILSRAGRLEEAKSFIN 436
L AC+ + G+ + Y +R + C+ID+ ++ G + +A+ +
Sbjct: 483 ALVACASLAALRIGKQ-----IHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFD 537
Query: 437 KMPFPPDAIGWATLLSSCRIHG 458
M + + W +L++ +HG
Sbjct: 538 NM-MAKNEVTWTSLMTGYGMHG 558
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 207/441 (46%), Gaps = 53/441 (12%)
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDS--ISWTTMITGLMQNGLEREAIDLFREMRLEGLA 171
+I+ + G + + L R D+ W ++I NG + + LF M
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
D +TF V ACG + ++ G+ HA + NVFVG+ALV MY +C+S+ A V
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN-GIEPDDFTLGSVISSCANLAS 290
F M+ +VVSW +++ Y + G + A+++F M G PD+ TL +V+ CA+L +
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
G Q H ++ + +I + V N LV Y KCG +++++ +F+ M+V+D VSW A+V+G
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAG 304
Query: 351 YAKFGKANETIDLFEK-----------------------------------MLSHGLKPD 375
Y++ G+ + + LFEK MLS G+KP+
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364
Query: 376 EVTLIGVLSACSRAGLVEKGRHY------FEIMVKEYGIRPIHDHYTCMIDILSRAGRLE 429
EVTLI VLS C+ G + G+ + I +++ G + +ID+ ++ +++
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVD 424
Query: 430 EAKSFINKM-PFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD-PYNPASYVLLSSI 487
A++ + + P D + W ++ HG+ + E D P ++ + ++
Sbjct: 425 TARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCAL 484
Query: 488 YASK-------GKWDHVSQLR 501
A GK H LR
Sbjct: 485 VACASLAALRIGKQIHAYALR 505
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 134/256 (52%), Gaps = 10/256 (3%)
Query: 213 SALVDMYCKCKSIKYAESVFRTMAWKN--VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
S L+ Y + +A S+ R + V W +++ YG NGC+ + + +F M
Sbjct: 63 SHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLS 122
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
PD++T V +C ++S+ G H SLVTG IS + V NALV Y +C ++ D+
Sbjct: 123 WTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDAR 182
Query: 331 RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH-GLKPDEVTLIGVLSACSRA 389
++F+EM+V D VSW +++ YAK GK +++F +M + G +PD +TL+ VL C+
Sbjct: 183 KVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASL 242
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
G G+ V I+ + C++D+ ++ G ++EA + + M D + W
Sbjct: 243 GTHSLGKQLHCFAVTSEMIQNMFVG-NCLVDMYAKCGMMDEANTVFSNMSV-KDVVSWNA 300
Query: 450 LLSSCRIHGNVEIGKW 465
+++ G +IG++
Sbjct: 301 MVA-----GYSQIGRF 311
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 239/605 (39%), Positives = 372/605 (61%), Gaps = 33/605 (5%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
+ ++L S+ + G+++H H++K + V++ + L+ +Y K + DA+R DE+P
Sbjct: 480 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 539
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
E+N+ +SWT MI+G Q G EA+ LF E
Sbjct: 540 ERNV-------------------------------VSWTAMISGYSQRGYASEALHLFVE 568
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M + G A ++FTF +VLT+C + G+QIH+ +I+ + ++FVGS+L+DMY K
Sbjct: 569 MLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGK 628
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
I A VF + ++VVS TA++ GY Q G EEA+ +F +QR G+ + T SV+++
Sbjct: 629 ICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTA 688
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
+ LA+L+ G Q H L L ++ + N+L+ Y KCG++ S R+F+ M R +SW
Sbjct: 689 LSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISW 748
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRH-YFEIM 402
A++ GY+K G E ++LF+ M +KPD VT + VLS CS G+ ++G ++E++
Sbjct: 749 NAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMV 808
Query: 403 VKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
++ G P +HY C++D+ RAGR+EEA FI KMPF P A W +LL +CR+H NV I
Sbjct: 809 NQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHI 868
Query: 463 GKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKS 522
G++ A LLE++ N +YV+LS++YAS G+WD V +R M+EK V K+PG SWI+
Sbjct: 869 GEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQ 928
Query: 523 RVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEK 582
+H F A D S P ++++A++ +L+ K+ + GYVP++S VL+DV+ +K K+L HSEK
Sbjct: 929 TLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEK 988
Query: 583 LAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECS 642
LA+AFGL+ P G P+R++KNLR+C DCHN K++S++ RE+ +RD RFH G CS
Sbjct: 989 LALAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCS 1048
Query: 643 CGDFW 647
CGD+W
Sbjct: 1049 CGDYW 1053
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 117/352 (33%), Positives = 190/352 (53%), Gaps = 36/352 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW +ISG++ G ++A+ ++ ML G + TF+T+L +S L
Sbjct: 538 MPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAP-NEFTFATVLTSCTSSSGFQL 596
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQIH ++K F S++FVGS L+DMYAK G I +A+R FD LPE+++V +I+G +
Sbjct: 597 GRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQ 656
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL EE A+DLFR ++ EG+ + T+ SV
Sbjct: 657 LGLDEE-------------------------------ALDLFRRLQREGMRSNYVTYASV 685
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LTA GL AL+ G+Q+H+ ++R V + ++L+DMY KC S+ Y+ +F +M + V
Sbjct: 686 LTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTV 745
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQ--F 297
+SW AMLVGY ++G EAV++F M + N ++PD T +V+S C++ + G + +
Sbjct: 746 ISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFY 805
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALV 348
+ G I +V +G+ G +E++ +M + W +L+
Sbjct: 806 EMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLL 857
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 171/317 (53%), Gaps = 13/317 (4%)
Query: 156 REAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSAL 215
R+ + EM ++GL ++ + SVLT C A+ EG+++HA +I+ ++ V++ + L
Sbjct: 459 RQLKEALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRL 518
Query: 216 VDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDD 275
+ +Y KC+ + A V M +NVVSWTAM+ GY Q G + EA+ +F M +G P++
Sbjct: 519 IVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNE 578
Query: 276 FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNE 335
FT +V++SC + + + G Q H + T S I V ++L+ Y K G I ++ R+F+
Sbjct: 579 FTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDG 638
Query: 336 MNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG 395
+ RD VS TA++SGYA+ G E +DLF ++ G++ + VT VL+A S ++ G
Sbjct: 639 LPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHG 698
Query: 396 RHYFEIMVKEYGIRPIHDHYTC----MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
R V + +R Y +ID+ S+ G L ++ + MP I W +L
Sbjct: 699 RQ-----VHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMP-ERTVISWNAML 752
Query: 452 SSCRIHGNVEIGKWAAE 468
HG +G+ A E
Sbjct: 753 VGYSKHG---LGREAVE 766
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 261/649 (40%), Positives = 381/649 (58%), Gaps = 35/649 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MPF D SWN +ISG +G+ A+ V + M +G+ ++ +T ++L + +
Sbjct: 276 MPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGI-KMNFVTVVSILPVCPQLGDIST 334
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
IH +++K G +FV + L++MYAK G + DA
Sbjct: 335 AMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDA------------------------ 370
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
R+ F+ M D +SW ++I QN A F +M+L G D T S+
Sbjct: 371 -------RKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSL 423
Query: 181 LTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+ + + +H FI+R ++V +G+A+VDMY K + A VF + K+
Sbjct: 424 ASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKD 483
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQR-NGIEPDDFTLGSVISSCANLASLEEGTQFH 298
V+SW ++ GY QNG + EA++++ M+ I P+ T S++ + A++ +L++G + H
Sbjct: 484 VISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIH 543
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
GR + T L + V+ L+ YGKCG + D+ LF ++ V+W A++S + G A
Sbjct: 544 GRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAE 603
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
+T+ LF +ML G+KPD VT + +LSACS +G VE+G+ F +M +EYGI+P HY CM
Sbjct: 604 KTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCM 662
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
+D+L RAG LE A FI MP PDA W LL +CRIHGN+E+GK+A++ L E+D N
Sbjct: 663 VDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNV 722
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
YVLLS+IYA+ GKW+ V ++R RE+G++K PG S I+ +V +F + S P
Sbjct: 723 GYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCK 782
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
+IY EL L KM GY+PD S VL DVE EK +L HSE+LAIAFG++ PP PI
Sbjct: 783 EIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPI 842
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R+ KNLRVC DCHNATK+IS+ITQREI+VRD+ RFH FK+G CSCGD+W
Sbjct: 843 RIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 157/531 (29%), Positives = 265/531 (49%), Gaps = 62/531 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKV-YNLMLKDGLGNLSRITFSTML-IMSSSRRCV 58
+P D +WN +IS + +G ++A+ Y L+L + R F T ++ + V
Sbjct: 177 IPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEI----RPDFYTFPPVLKACGTLV 232
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
D GR+IH K GF VFV + L+ MY++ G A+ FD++P +++ +N MI+GL
Sbjct: 233 D-GRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGL 291
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+ QNG +A+D+ EMRLEG+ M+ T
Sbjct: 292 I-------------------------------QNGNAAQALDVLDEMRLEGIKMNFVTVV 320
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
S+L C L + IH ++I++ + ++FV +AL++MY K +++ A F+ M
Sbjct: 321 SILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFIT 380
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+VVSW +++ Y QN A F MQ NG +PD TL S+ S A + H
Sbjct: 381 DVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVH 440
Query: 299 GRSLVTG-LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
G + G L+ + + NA+V Y K G ++ +H++F + V+D +SW L++GYA+ G A
Sbjct: 441 GFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLA 500
Query: 358 NETIDLFEKMLS-HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH-DHY 415
+E I++++ M + P++ T + +L A + G +++G ++K +H D +
Sbjct: 501 SEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKT----NLHLDVF 556
Query: 416 --TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE-IGKWAAESLLE 472
TC+ID+ + GRL +A S ++P ++ W ++S IHG+ E K E L E
Sbjct: 557 VATCLIDVYGKCGRLVDAMSLFYQVP-QESSVTWNAIISCHGIHGHAEKTLKLFGEMLDE 615
Query: 473 -LDPYNPASYVLLSSI----YASKGKWDHVSQLRRTMREKGVR---KDPGC 515
+ P + LLS+ + +GKW R M+E G++ K GC
Sbjct: 616 GVKPDHVTFVSLLSACSHSGFVEEGKW-----CFRLMQEYGIKPSLKHYGC 661
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 126/478 (26%), Positives = 226/478 (47%), Gaps = 50/478 (10%)
Query: 36 GLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYD 95
GLGN + L SS++ + +H ++ G +F+ + LV++YA LG +
Sbjct: 112 GLGNQNEEIDFNFLFDSSTK--TPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSL 169
Query: 96 AKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLE 155
++ FD++P+K D +W +MI+ + NG
Sbjct: 170 SRCTFDQIPQK-------------------------------DVYTWNSMISAYVHNGHF 198
Query: 156 REAIDLFREMRL-EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSA 214
EAI F ++ L + D +TF VL ACG L+ +G++IH + + + NVFV ++
Sbjct: 199 HEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLV---DGRRIHCWAFKLGFQWNVFVAAS 255
Query: 215 LVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD 274
L+ MY + A S+F M ++++ SW AM+ G QNG + +A+ + M+ GI+ +
Sbjct: 256 LIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMN 315
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN 334
T+ S++ C L + H + GL + VSNAL+ Y K GN+ED+ + F
Sbjct: 316 FVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQ 375
Query: 335 EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEK 394
+M + D VSW ++++ Y + F KM +G +PD +TL+ + S +++ +
Sbjct: 376 QMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKN 435
Query: 395 GRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
R +++ + ++D+ ++ G L+ A + ++ D I W TL++
Sbjct: 436 SRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHK-VFEIILVKDVISWNTLITGY 494
Query: 455 RIHG----NVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
+G +E+ K E E+ P N ++V + YA HV L++ MR G
Sbjct: 495 AQNGLASEAIEVYK-MMEECKEIIP-NQGTWVSILPAYA------HVGALQQGMRIHG 544
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 255/649 (39%), Positives = 380/649 (58%), Gaps = 34/649 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTML--IMSSSRRCV 58
+P D VSWN ISG HG A+++ M GL + T S++L +
Sbjct: 263 VPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVP-NVFTLSSILKACAGAGAGAF 321
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
LGRQIHG ++K S ++G LVDMYAK GL+ DA
Sbjct: 322 ALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDA---------------------- 359
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
R++F + KD + W +I+G G E++ LF MR EG +++ T
Sbjct: 360 ---------RKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLA 410
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
+VL + L A+ + Q+HA + + V + L+D Y KC ++YA VF +
Sbjct: 411 AVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSD 470
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
N++++T+M+ Q E+A+K+F M R G+EPD F L S++++CA+L++ E+G Q H
Sbjct: 471 NIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVH 530
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
+ ++ + NALV Y KCG+IED+ F+ + + VSW+A++ G A+ G
Sbjct: 531 AHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGK 590
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
+D+F +M+ + P+ +TL VL AC+ AGLV++ + YF M + +GI +HY+CM
Sbjct: 591 RALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCM 650
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
ID+L RAG+L++A +N MPF +A W LL++ R+H + E+GK AAE L L+P
Sbjct: 651 IDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKS 710
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
++VLL++ YAS G WD V+++R+ M++ V+K+P SW++ K RVH F D S P +
Sbjct: 711 GTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRAR 770
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
IYA+LE+L M K GYVP++ LHDV+ SEK +L+HHSE+LA+AF L+ P G PI
Sbjct: 771 DIYAKLEELGDLMSKAGYVPNLEVDLHDVDKSEKELLLSHHSERLAVAFALISTPAGAPI 830
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RV KNLR+C DCH A K+ISKI REI++RD RFH F +G CSCGD+W
Sbjct: 831 RVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFSDGACSCGDYW 879
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 119/457 (26%), Positives = 231/457 (50%), Gaps = 36/457 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
+ VSWN ++S + +DAV+++ M+ G+ + FS ++ + R ++ GR++
Sbjct: 166 NAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGV-RPNEFGFSCVVNACTGSRDLEAGRKV 224
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +++ G+ VF + LVDMY+KLG I+ A F ++P+ ++V +N I+G +
Sbjct: 225 HAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCV----- 279
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL--T 182
+G ++ A++L +M+ GL + FT S+L
Sbjct: 280 --------------------------LHGHDQHALELLLQMKSSGLVPNVFTLSSILKAC 313
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
A G A G+QIH F+I+ + ++G ALVDMY K + A VF + K+++
Sbjct: 314 AGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLL 373
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL 302
W A++ G GC E++ +FC M++ G + + TL +V+ S A+L ++ + TQ H +
Sbjct: 374 WNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAE 433
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
G +S V N L+ Y KC + ++++F E + + +++T++++ ++ + I
Sbjct: 434 KIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIK 493
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL 422
LF +ML GL+PD L +L+AC+ E+G+ ++K + + ++
Sbjct: 494 LFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAG-NALVYTY 552
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
++ G +E+A + +P + W+ ++ HG+
Sbjct: 553 AKCGSIEDADLAFSGLP-DKGVVSWSAMIGGLAQHGH 588
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 133/506 (26%), Positives = 225/506 (44%), Gaps = 71/506 (14%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P H VSW+ L++ ++++ +A+ + M G+ R + I+ LG
Sbjct: 66 PCH--VSWSSLVTAYSNNALPREALAAFRAMRARGV----RCNEFALPIVLKCAPDAGLG 119
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
Q+H + G +FV + LV MY G + +A+R FDE
Sbjct: 120 VQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDE------------------- 160
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
+D++++SW M++ ++N +A++LF EM G+ ++F F V+
Sbjct: 161 -----------AARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVV 209
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
AC G LE G+++HA ++R + +VF +ALVDMY K I A VF + +VV
Sbjct: 210 NACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVV 269
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT--QFHG 299
SW A + G +G + A+++ M+ +G+ P+ FTL S++ +CA + Q HG
Sbjct: 270 SWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHG 329
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ S + ALV Y K G ++D+ ++F + +D + W AL+SG + G E
Sbjct: 330 FMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGE 389
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRA----------GLVEK-----GRH------- 397
++ LF +M G + TL VL + + L EK H
Sbjct: 390 SLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLID 449
Query: 398 -YFEIMVKEYGIRPIHDH-------YTCMIDILSRAGRLEEAKSFINKM---PFPPDAIG 446
Y++ Y + +H +T MI LS+ E+A +M PD
Sbjct: 450 SYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFV 509
Query: 447 WATLLSSCRIHGNVEIGKWAAESLLE 472
++LL++C E GK L++
Sbjct: 510 LSSLLNACASLSAYEQGKQVHAHLIK 535
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 192/420 (45%), Gaps = 46/420 (10%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
+ S +L ++ + + LG IH H+LK G + F + L+ Y+K L A+R FDE
Sbjct: 6 SISPLLTRYAATQSLFLGAHIHAHLLKSGL-LHAF-RNHLLSFYSKCRLPGSARRVFDET 63
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
P D +SW++++T N L REA+ FR
Sbjct: 64 P-------------------------------DPCHVSWSSLVTAYSNNALPREALAAFR 92
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
MR G+ ++F VL C L G Q+HA + ++FV +ALV MY
Sbjct: 93 AMRARGVRCNEFALPIVLK-CAPDAGL--GVQVHAVAVSTGLSGDIFVANALVAMYGGFG 149
Query: 224 SIKYAESVFRTMAW-KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
+ A VF A +N VSW M+ + +N +AV++F M +G+ P++F V+
Sbjct: 150 FVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVV 209
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
++C LE G + H + TG + +NALV Y K G+I + +F ++ D V
Sbjct: 210 NACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVV 269
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS--ACSRAGLVEKGRHYFE 400
SW A +SG G ++L +M S GL P+ TL +L A + AG GR
Sbjct: 270 SWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHG 329
Query: 401 IMVKEYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
M+K D Y ++D+ ++ G L++A+ +P D + W L+S C HG
Sbjct: 330 FMIKACADS---DDYIGVALVDMYAKYGLLDDARKVFEWIP-RKDLLLWNALISGCS-HG 384
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 253/643 (39%), Positives = 380/643 (59%), Gaps = 33/643 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +SWN +ISG+ S+G + ++ ML G+ N T +++ S+ + LGR +
Sbjct: 215 DVISWNSMISGYVSNGLSEKGLDLFEQMLLLGI-NTDLATMVSVVAGCSNTGMLLLGRAL 273
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG+ +K FG + + + L+DMY+K G + A + F+ + E+++V
Sbjct: 274 HGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVV--------------- 318
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
SWT+MI G + GL ++ LF EM EG++ D FT ++L AC
Sbjct: 319 ----------------SWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHAC 362
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
LE GK +H +I N + ++FV +AL+DMY KC S+ A SVF M K++VSW
Sbjct: 363 ACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWN 422
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
M+ GY +N EA+ +F MQ N +P+ T+ ++ +CA+LA+LE G + HG L
Sbjct: 423 TMIGGYSKNSLPNEALNLFVEMQYNS-KPNSITMACILPACASLAALERGQEIHGHILRN 481
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G V+NALV Y KCG + + LF+ + +D VSWT +++GY G +E I F
Sbjct: 482 GFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAF 541
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+M + G++PDEV+ I +L ACS +GL+++G +F +M I P +HY C++D+L+R
Sbjct: 542 NEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLAR 601
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG L +A FI MP PDA W LL CRI+ +V++ + AE + EL+P N YVLL
Sbjct: 602 AGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLL 661
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
++IYA KW+ V +LR + +G+RK+PGCSWI+ K +VHIF D S P +++I L
Sbjct: 662 ANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLL 721
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
+K +M +EG+ P M L + +EK L HSEK+A+AFG+L +PPG +RV KNL
Sbjct: 722 KKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNL 781
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RVC DCH K++SK+ +R+I++RD+ RFH FK+G CSC W
Sbjct: 782 RVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 824
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 139/468 (29%), Positives = 245/468 (52%), Gaps = 24/468 (5%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
+N+ I G++ A+++ N K +L T+ ++L + + + + GR+IH I
Sbjct: 71 YNIEICRFCELGNLRRAMELINQSPKP---DLELRTYCSVLQLCADLKSIQDGRRIHSII 127
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG------ 122
+GS LV MY G + + +R FD++ + + ++N ++ G + G
Sbjct: 128 QSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESL 187
Query: 123 ------------LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL 170
VE +R+LF + D+D ISW +MI+G + NGL + +DLF +M L G+
Sbjct: 188 SLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGI 247
Query: 171 AMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAES 230
D T SV+ C L G+ +H + I+ + + + L+DMY K ++ A
Sbjct: 248 NTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQ 307
Query: 231 VFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS 290
VF TM ++VVSWT+M+ GY + G S+ +V++F M++ GI PD FT+ +++ +CA
Sbjct: 308 VFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGL 367
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
LE G H + S + VSNAL+ Y KCG++ D+H +F+EM V+D VSW ++ G
Sbjct: 368 LENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGG 427
Query: 351 YAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP 410
Y+K NE ++LF +M + KP+ +T+ +L AC+ +E+G+ +++ G
Sbjct: 428 YSKNSLPNEALNLFVEM-QYNSKPNSITMACILPACASLAALERGQEIHGHILRN-GFSL 485
Query: 411 IHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
++D+ + G L A+ + +P D + W +++ +HG
Sbjct: 486 DRHVANALVDMYLKCGALGLARLLFDMIP-EKDLVSWTVMIAGYGMHG 532
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 116/253 (45%), Gaps = 39/253 (15%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSWN +I G++ + N+A+ ++ M + N IT + +L +S ++
Sbjct: 413 MQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNSKPN--SITMACILPACASLAALER 470
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G++IHGHIL+ GF V + LVDMY K G + A+ FD +PEK++V + MI G
Sbjct: 471 GQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGY-- 528
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GM +G EAI F EMR G+ D+ +F S+
Sbjct: 529 ------------GM-----------------HGYGSEAIAAFNEMRNSGIEPDEVSFISI 559
Query: 181 LTACGGLLALEEGKQIHAFIIRN---DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
L AC L+EG + N + K + + +VD+ + ++ A + M
Sbjct: 560 LYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHY--ACIVDLLARAGNLSKAYKFIKMMPI 617
Query: 238 K-NVVSWTAMLVG 249
+ + W A+L G
Sbjct: 618 EPDATIWGALLCG 630
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 262/647 (40%), Positives = 369/647 (57%), Gaps = 35/647 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + N +I G+ + A+ Y LM+ GL + R TF + L S C
Sbjct: 100 IPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGL-DPDRFTFPS-LFKSCGVLCE-- 155
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H H K GF S ++ + L++MY+ G + A++ FD+
Sbjct: 156 GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDK------------------ 197
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
M +K +SW TMI Q L EAI LFR M + + ++ T +V
Sbjct: 198 -------------MVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNV 244
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LTAC LE KQ+H +I + + SAL+D+YCKC A +F M KN+
Sbjct: 245 LTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNL 304
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
W M+ G+ ++ EEA+ +F MQ +G++ D T+ S++ +C +L +LE G H
Sbjct: 305 FCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVY 364
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ + + ALV Y KCG+IE + R+F EM +D ++WTAL+ G A G+ +
Sbjct: 365 IEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKA 424
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++LF +M +KPD +T +GVL+ACS AGLV +G YF M +YGI+P +HY CM+D
Sbjct: 425 LELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVD 484
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAGR+ EA+ I MP PD LLS+CRIHGN+ + + AA+ L+ELDP N +
Sbjct: 485 MLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGT 544
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS+IY+S W+ ++R M E+ ++K PGCS I+ VH F D S P S +I
Sbjct: 545 YVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEI 604
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y L+ + R++ GYVPD S VL D++ EK L+ HSEKLAIAFGLL PG PIRV
Sbjct: 605 YETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRV 664
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VKNLRVCSDCH+A K+IS++ REI+VRD RFH F G CSC DFW
Sbjct: 665 VKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 711
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 172/330 (52%), Gaps = 5/330 (1%)
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G + +R +F + + + + ++I G L R+AI ++ M L+GL D+FTF S+
Sbjct: 88 GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLF 147
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+CG L EGKQ+H + + ++ + L++MY C + A VF M K+VV
Sbjct: 148 KSCG---VLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVV 204
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW M+ Y Q EA+K+F M+ ++P++ TL +V+++CA LE Q H
Sbjct: 205 SWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYI 264
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
TG+ +++AL+ Y KCG + LFN+M ++ W +++G+ + E +
Sbjct: 265 DETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEAL 324
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
LF +M G+K D+VT+ +L AC+ G +E G+ + + +++ I T ++D+
Sbjct: 325 SLFNEMQLSGVKGDKVTMASLLIACTHLGALELGK-WLHVYIEKEKIEVDVALGTALVDM 383
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
++ G +E A +MP D + W L+
Sbjct: 384 YAKCGSIESAMRVFQEMP-EKDVMTWTALI 412
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 258/656 (39%), Positives = 391/656 (59%), Gaps = 46/656 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +WN ++SG + +AV ++ M+ +G+ +T S++L M CV L
Sbjct: 129 MSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAG-DTVTVSSVLPM-----CVLL 182
Query: 61 GRQI-----HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
G Q+ H + +K G +FV + L+D+Y KLG++
Sbjct: 183 GDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGML---------------------- 220
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
EE++ +F GM+ +D ++W ++I+G Q G A+ +F+ MR G++ D
Sbjct: 221 ---------EEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVL 271
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRND-HKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
T S+ +A K +H +++R D++ G+A+VDMY K +I+ A+ +F +
Sbjct: 272 TLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDS 331
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN-GIEPDDFTLGSVISSCANLASLEE 293
M ++ VSW ++ GY QNG + EAV+ + +MQ++ G++ T SV+ + ++L +L++
Sbjct: 332 MPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQ 391
Query: 294 GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK 353
G + H S+ GL + V L+ Y KCG + ++ LF +M R W A++SG
Sbjct: 392 GMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGV 451
Query: 354 FGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
G E + LF +M G+KPD VT + +L+ACS AGLV++GR +F++M Y I PI
Sbjct: 452 HGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAK 511
Query: 414 HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL 473
HY CM D+L RAG+L+EA +FI MP PD+ W LL +CRIHGNVE+GK A+++L EL
Sbjct: 512 HYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFEL 571
Query: 474 DPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWS 533
DP N YVL+S++YA GKWD V ++R +R + ++K PG S I+ K V++F + + +
Sbjct: 572 DPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQT 631
Query: 534 SPYS--DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLF 591
P+ ++I AEL L K+ GYV D S VL DVE EK +LN+HSE+LAIAFG++
Sbjct: 632 EPHPQHEEIQAELRSLLAKIRSVGYVSDYSFVLQDVEDDEKEHILNNHSERLAIAFGIIN 691
Query: 592 IPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
P P+ + KNLRVC DCHNATKYIS+IT+REI+VRD+ RFH FK+G CSCGDFW
Sbjct: 692 TPSRTPLHIYKNLRVCGDCHNATKYISQITEREIIVRDSNRFHHFKDGHCSCGDFW 747
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 188/361 (52%), Gaps = 8/361 (2%)
Query: 103 LPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLF 162
L ++ +++ LR G + E+ ++F M ++D +W M++GL +N EA+ LF
Sbjct: 98 LVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLF 157
Query: 163 REMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC 222
M EG+A D T SVL C L +H + +++ +FV +AL+D+Y K
Sbjct: 158 GRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKL 217
Query: 223 KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
++ A+ VF M +++V+W +++ G Q G + A+K+F M+ +G+ PD TL S+
Sbjct: 218 GMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLA 277
Query: 283 SSCANLASLEEGTQFHGRSLVTGL-ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE 341
S+ A H + G + I NA+V Y K NIE + R+F+ M V+D
Sbjct: 278 SAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDS 337
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSH-GLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
VSW L++GY + G ANE ++ + M H GLK + T + VL A S G +++G
Sbjct: 338 VSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHA 397
Query: 401 IMVKEYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ +K G+ D Y TC+ID+ ++ G+L EA KMP W ++S +HG
Sbjct: 398 LSIK-IGLNV--DVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTG-PWNAIISGLGVHG 453
Query: 459 N 459
+
Sbjct: 454 H 454
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 153/315 (48%), Gaps = 11/315 (3%)
Query: 143 TTMITGLMQNGLEREAIDLFREMRLEGLAM--DQFTFGSVLTACGGLLALEEGKQIHAFI 200
T+I + L R A L R + D FTF S++ A + Q+HA
Sbjct: 37 NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAP---SNASAAQLHACA 93
Query: 201 IR-NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEA 259
+R + +VF +LV Y + I A VF M+ ++V +W AML G +N + EA
Sbjct: 94 LRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEA 153
Query: 260 VKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTF 319
V +F M G+ D T+ SV+ C L H ++ GL + V NAL+
Sbjct: 154 VGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDV 213
Query: 320 YGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTL 379
YGK G +E++ +F+ M RD V+W +++SG + G+ + +F+ M G+ PD +TL
Sbjct: 214 YGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTL 273
Query: 380 IGVLSACSRA--GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINK 437
+ + SA ++ G K H + +M + + + I ++D+ ++ +E A+ +
Sbjct: 274 VSLASAIAQGGDGRSAKSLHCY-VMRRGWDVDDIIAG-NAIVDMYAKLSNIEAAQRMFDS 331
Query: 438 MPFPPDAIGWATLLS 452
MP D++ W TL++
Sbjct: 332 MPV-QDSVSWNTLIT 345
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 262/650 (40%), Positives = 387/650 (59%), Gaps = 36/650 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SWN +ISG +G+V +A++V + M + + + +T S+ML + + V
Sbjct: 208 MPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEV-KMDTVTVSSMLPICAQSNDVVG 266
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +H +++K G S VFV + L++MY+K G + DA
Sbjct: 267 GVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDA------------------------ 302
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+R+F GM+ +D +SW ++I QN A+ F+EM G+ D T S+
Sbjct: 303 -------QRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSL 355
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+ G L G+ +H F++R + ++ +G+ALV+MY K SI A +VF + ++
Sbjct: 356 ASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRD 415
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG--IEPDDFTLGSVISSCANLASLEEGTQF 297
V+SW ++ GY QNG + EA+ + NM G I P+ T S++ + +++ +L++G +
Sbjct: 416 VISWNTLITGYAQNGLASEAIDAY-NMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKI 474
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
HGR + L + V+ L+ YGKCG +ED+ LF E+ V W A++S G
Sbjct: 475 HGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHG 534
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
+ + LF+ M + G+K D +T + +LSACS +GLV++ + F+ M KEY I+P HY C
Sbjct: 535 EKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGC 594
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
M+D+ RAG LE+A + ++ MP DA W TLL++CRIHGN E+G +A++ LLE+D N
Sbjct: 595 MVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSEN 654
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
YVLLS+IYA+ GKW+ ++R R++G+RK PG S + S V +F A + S P
Sbjct: 655 VGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQC 714
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
+IY EL LN KM GYVPD S VL DVE EK ++L HSE+LAI FG++ PP P
Sbjct: 715 AEIYEELRVLNAKMKSLGYVPDYSFVLQDVEEDEKEEILTSHSERLAIVFGIISTPPKSP 774
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
IR+ KNLRVC DCHNATKYISKIT+REI+VRD+ RFH FK+G CSCGD+W
Sbjct: 775 IRIFKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGICSCGDYW 824
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/459 (28%), Positives = 222/459 (48%), Gaps = 44/459 (9%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL--GRQIH 65
SWN ++S + G D++ +L TF +L + C+ L G ++H
Sbjct: 116 SWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVL-----KACLSLADGEKMH 170
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
+LK GF V+V + L+ +Y+ R G VE
Sbjct: 171 CWVLKMGFEHDVYVAASLIHLYS-------------------------------RFGAVE 199
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
+ ++F M +D SW MI+G QNG EA+ + M+ E + MD T S+L C
Sbjct: 200 VAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICA 259
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
+ G +H ++I++ + +VFV +AL++MY K ++ A+ VF M +++VSW +
Sbjct: 260 QSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNS 319
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
++ Y QN A+ F M G+ PD T+ S+ S L+ G HG +
Sbjct: 320 IIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCR 379
Query: 306 LISF-ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
+ I + NALV Y K G+I+ + +F ++ RD +SW L++GYA+ G A+E ID +
Sbjct: 380 WLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAY 439
Query: 365 EKMLSHG--LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL 422
M+ G + P++ T + +L A S G +++G ++K + TC+ID+
Sbjct: 440 -NMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVA-TCLIDMY 497
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+ GRLE+A S ++P ++ W ++SS IHG+ E
Sbjct: 498 GKCGRLEDAMSLFYEIP-QETSVPWNAIISSLGIHGHGE 535
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 231/465 (49%), Gaps = 58/465 (12%)
Query: 55 RRC--VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYN 112
R C +++ +Q+H +L G V + + LV +YA LG + + F + KNI +N
Sbjct: 59 RSCTNINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWN 118
Query: 113 TMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM 172
+M++ +RRG + +DS+ T + + L G+
Sbjct: 119 SMVSAYVRRG------------RYRDSMDCVTEL------------------LSLSGVRP 148
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
D +TF VL AC L+L +G+++H ++++ + +V+V ++L+ +Y + +++ A VF
Sbjct: 149 DFYTFPPVLKAC---LSLADGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVF 205
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
M ++V SW AM+ G+ QNG EA+++ M+ ++ D T+ S++ CA +
Sbjct: 206 VDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVV 265
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
G H + GL S + VSNAL+ Y K G ++D+ R+F+ M VRD VSW ++++ Y
Sbjct: 266 GGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYE 325
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR--HYFEIMVKEYGIRP 410
+ + F++ML G++PD +T++ + S + GR H F + + +
Sbjct: 326 QNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDI 385
Query: 411 IHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL 470
+ + ++++ ++ G ++ A++ ++P D I W TL++ +G A+E+
Sbjct: 386 VIGN--ALVNMYAKLGSIDCARAVFEQLP-SRDVISWNTLITGYAQNG------LASEA- 435
Query: 471 LELDPYNPASYVLLSSIYASKGKW-------DHVSQLRRTMREKG 508
+D YN +I ++G W HV L++ M+ G
Sbjct: 436 --IDAYNMMEEG--RTIVPNQGTWVSILPAYSHVGALQQGMKIHG 476
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN 334
DF L V SC N+ Q H LV G + + LVT Y G++ S F
Sbjct: 53 DFNL--VFRSCTNI---NVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFK 107
Query: 335 EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS-HGLKPDEVTLIGVLSACSRAGLVE 393
+ ++ SW ++VS Y + G+ +++D ++LS G++PD T VL AC E
Sbjct: 108 HIQRKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGE 167
Query: 394 KGRHYFEIMVKEYGIRPIHDHYTC--MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
K + M E HD Y +I + SR G +E A MP D W ++
Sbjct: 168 KMHCWVLKMGFE------HDVYVAASLIHLYSRFGAVEVAHKVFVDMPV-RDVGSWNAMI 220
Query: 452 SSCRIHGNVEIGKWAAESLLELD 474
S +GNV AE+L LD
Sbjct: 221 SGFCQNGNV------AEALRVLD 237
>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 682
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 252/647 (38%), Positives = 383/647 (59%), Gaps = 35/647 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MPF + VS NLL+SG+AS G ++++ +L+ ++ S + +++ R D+
Sbjct: 71 MPFRNAVSANLLMSGYASSGRHKESLQ----LLRVVDFGMNEYVLSAAVSATANVRSYDM 126
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ HG+ +K GF +V + ++ MY + + DA + F+ ++G
Sbjct: 127 GRQCHGYAVKAGFAEQRYVFNAVLYMYCQCAHMEDASKVFES------------VSGF-- 172
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
D+ ++ +MI G + G ++ + R M E D ++ +V
Sbjct: 173 -----------------DAFAFNSMINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYVAV 215
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C + G Q+HA ++ + NV+VGSALVDMY KC + A F + KNV
Sbjct: 216 LGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNV 275
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWTA++ Y QN E+A+++F +M+ G++P++FT ++SCA LA+L G
Sbjct: 276 VSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGAC 335
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ TG + VSNAL+ Y K G+IED+HR+F M +RD VSW +++GYA G A E
Sbjct: 336 VMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREG 395
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++ F MLS + P VT +GVLSAC++ GLV++ +Y M+KE GI P +HYTCM+
Sbjct: 396 MEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVG 455
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L R GRL+EA+ FI D + W +LL+SC+++ N +G AE +L+L+P + +
Sbjct: 456 LLCRVGRLDEAERFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHRVAEQILQLEPSDVGT 515
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS++YA +WD V ++R+ MRE+ VRK PG SWI S VH+F++++ P DQI
Sbjct: 516 YVLLSNMYAKANRWDGVVKVRKHMRERAVRKSPGVSWIHVGSDVHVFTSEEKVHPQMDQI 575
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
+LE+L ++ GYVP+ + VLHD++ K + L +HSEKLA+AFGL+ P G I +
Sbjct: 576 AKKLEELIDQIKAIGYVPNFAVVLHDIDDERKEEHLMYHSEKLALAFGLIHTPKGATIHI 635
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+KNLR+C DCH A K IS +T R+I+VRDAVRFH + G CSC D+W
Sbjct: 636 MKNLRICDDCHVAIKLISVVTSRKIVVRDAVRFHCIEGGICSCNDYW 682
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 107/198 (54%), Gaps = 4/198 (2%)
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
L +GK +HA +I H D V + + L+ Y KC + A +VF M ++N VS ++ G
Sbjct: 27 LSKGKALHARLITAAHFD-VVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSG 85
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
Y +G +E++++ ++ +++ L + +S+ AN+ S + G Q HG ++ G
Sbjct: 86 YASSGRHKESLQL---LRVVDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQ 142
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
V NA++ Y +C ++ED+ ++F ++ D ++ ++++GY G+ + ++ + M
Sbjct: 143 RYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTG 202
Query: 370 HGLKPDEVTLIGVLSACS 387
K D V+ + VL C+
Sbjct: 203 EAEKWDYVSYVAVLGHCA 220
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
L +G H R L+T + + N L++FY KCG + + +F+ M R+ VS L+SG
Sbjct: 27 LSKGKALHAR-LITAAHFDVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSG 85
Query: 351 YAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
YA G+ E++ L +++ G+ +E L +SA + + GR VK
Sbjct: 86 YASSGRHKESLQLL-RVVDFGM--NEYVLSAAVSATANVRSYDMGRQCHGYAVK 136
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 255/647 (39%), Positives = 386/647 (59%), Gaps = 40/647 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKV-YNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL--G 61
D V+WN +++G +G ++A++ Y+L D L S + I+ +S R L G
Sbjct: 225 DIVTWNSMLTGFIQNGLYSEALEFFYDLQNAD----LKPDQVSIISIIVASGRLGYLLNG 280
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
++IH + +K GF S + VG+ L+DMYAK + R FD
Sbjct: 281 KEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDL------------------- 321
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
M KD ISWTT G QN +A++L R++++EG+ +D GS+L
Sbjct: 322 ------------MAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSIL 369
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
AC GL L + K+IH + IR D V + + ++D+Y +C I YA +F ++ K+VV
Sbjct: 370 LACRGLNCLGKIKEIHGYTIRGGLSDPV-LQNTIIDVYGECGIIDYAVRIFESIECKDVV 428
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SWT+M+ Y NG + +A+++F +M+ G+EPD TL S++S+ +L++L++G + HG
Sbjct: 429 SWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFI 488
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ G I ++SN LV Y +CG++ED++++F R+ + WTA++S Y G +
Sbjct: 489 IRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAV 548
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
+LF +M + PD +T + +L ACS +GLV +G+ + EIM EY + P +HYTC++D+
Sbjct: 549 ELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDL 608
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
L R LEEA + M P W LL +CRIH N EIG+ AAE LLELD NP +Y
Sbjct: 609 LGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDLDNPGNY 668
Query: 482 VLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIY 541
VL+S+++A+ G+W V ++R M+ G+ K+PGCSWI+ +++H F + D P D+IY
Sbjct: 669 VLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIY 728
Query: 542 AELEKLNRKMIKE-GYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
+L ++ K+ +E GYV VLH+V EK++ML HSE+LAIA+GLL G PIRV
Sbjct: 729 QKLAQVTEKLKREGGYVAQTKFVLHNVGEEEKVQMLYGHSERLAIAYGLLATAEGTPIRV 788
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCH+ +S+ +RE++VRDA RFH FK+G CSCGDFW
Sbjct: 789 TKNLRVCGDCHSFCTLVSRFFERELIVRDASRFHHFKDGMCSCGDFW 835
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 149/488 (30%), Positives = 249/488 (51%), Gaps = 40/488 (8%)
Query: 4 HDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQ 63
+D VSWN +IS ++ +G +A+ +++ MLK G+ + TF+ L + LG Q
Sbjct: 123 NDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVT-NTYTFAAALQACEDSSFIKLGMQ 181
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
IH ILK G V+V + LV MY + G + +A F L K+IV +N+M+TG ++ GL
Sbjct: 182 IHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGL 241
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
E+ F +++ D L DQ + S++ A
Sbjct: 242 YSEALEFFYDLQNAD-------------------------------LKPDQVSIISIIVA 270
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
G L L GK+IHA+ I+N N+ VG+ L+DMY KC + Y F MA K+++SW
Sbjct: 271 SGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISW 330
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
T GY QN C +A+++ +Q G++ D +GS++ +C L L + + HG ++
Sbjct: 331 TTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIR 390
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
GL S + N ++ YG+CG I+ + R+F + +D VSWT+++S Y G AN+ +++
Sbjct: 391 GGL-SDPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEV 449
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F M GL+PD VTL+ +LSA ++KG+ ++++ I T ++D+ +
Sbjct: 450 FSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNT-LVDMYA 508
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL--DPYNPASY 481
R G +E+A + I W ++S+ +HG G+ A E + + + P
Sbjct: 509 RCGSVEDAYKIFTCTK-NRNLILWTAMISAYGMHG---YGEAAVELFMRMKDEKIIPDHI 564
Query: 482 VLLSSIYA 489
L+ +YA
Sbjct: 565 TFLALLYA 572
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 137/508 (26%), Positives = 237/508 (46%), Gaps = 54/508 (10%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
+WN ++ G+ S+G A+++Y M G+ + TF +L + G +IHG
Sbjct: 25 TWNAMMGGYVSNGEALGALEMYREMRHLGV-SFDSYTFPVLLKACGIVEDLFCGAEIHGL 83
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
+K+G S+VFV + LV +YAK I A++ FD + +N
Sbjct: 84 AIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRN-------------------- 123
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
D +SW ++I+ NG+ EA+ LF EM G+ + +TF + L AC
Sbjct: 124 ----------DVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDS 173
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
++ G QIHA I+++ +V+V +ALV MY + + A +F + K++V+W +ML
Sbjct: 174 SFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSML 233
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
G+ QNG EA++ F ++Q ++PD ++ S+I + L L G + H ++ G
Sbjct: 234 TGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFD 293
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
S I V N L+ Y KC + R F+ M +D +SWT +GYA+ + ++L ++
Sbjct: 294 SNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQL 353
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
G+ D + +L AC + K + ++ P+ + +ID+ G
Sbjct: 354 QMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPVLQN--TIIDVYGECGI 411
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHGN-----VEIGKWAAESLLELDPYNPASYV 482
++ A + D + W +++ SC +H +E+ E+ LE D YV
Sbjct: 412 IDYAVRIFESIE-CKDVVSWTSMI-SCYVHNGLANKALEVFSSMKETGLEPD------YV 463
Query: 483 LLSSIYAS--------KGKWDHVSQLRR 502
L SI ++ KGK H +R+
Sbjct: 464 TLVSILSAVCSLSTLKKGKEIHGFIIRK 491
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 156/284 (54%), Gaps = 1/284 (0%)
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G V ++ +F M ++ +W M+ G + NG A++++REMR G++ D +TF +L
Sbjct: 6 GSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPVLL 65
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN-V 240
ACG + L G +IH I+ VFV ++LV +Y KC I A +F M +N V
Sbjct: 66 KACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDV 125
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW +++ Y NG EA+ +F M + G+ + +T + + +C + + ++ G Q H
Sbjct: 126 VSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAA 185
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
L +G + + V+NALV Y + G + ++ +F + +D V+W ++++G+ + G +E
Sbjct: 186 ILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEA 245
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
++ F + + LKPD+V++I ++ A R G + G+ +K
Sbjct: 246 LEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIK 289
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 123/236 (52%), Gaps = 3/236 (1%)
Query: 218 MYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFT 277
MY KC S+ AE +F M+ +++ +W AM+ GY NG + A++++ M+ G+ D +T
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 278 LGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN 337
++ +C + L G + HG ++ G SF+ V N+LV Y KC +I + +LF+ M
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120
Query: 338 VR-DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR 396
VR D VSW +++S Y+ G E + LF +ML G+ + T L AC + ++ G
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180
Query: 397 HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
++K + ++ ++ + R G++ EA + D + W ++L+
Sbjct: 181 QIHAAILKSGRVLDVYVA-NALVAMYVRFGKMPEAAVIFGNLE-GKDIVTWNSMLT 234
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 261/655 (39%), Positives = 389/655 (59%), Gaps = 42/655 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VS+N LI+ +A G A +++ L +++ ++ T S I+++ V L
Sbjct: 100 MPQPDSVSYNTLIAAYARRGDTQPAFQLF-LEMREAFLDMDGFTLSG--IITACGINVGL 156
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
RQ+H + G SYV VG+ L+ Y+K
Sbjct: 157 IRQLHALSVVTGLDSYVSVGNALITSYSK------------------------------- 185
Query: 121 RGLVEESRRLFRGM-KDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
G ++E+RR+F + +D+D +SW +M+ MQ+ +A++L+ EM + GL +D FT S
Sbjct: 186 NGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLAS 245
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY-AESVFRTMAWK 238
VLTA + L G Q HA +I++ + N VGS L+D+Y KC VF ++
Sbjct: 246 VLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNP 305
Query: 239 NVVSWTAMLVGYG-QNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
++V W M+ GY S+EA++ F +Q G PDD +L VIS+C+N++S +G Q
Sbjct: 306 DLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQV 365
Query: 298 HGRSLVTGLIS-FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
HG +L + S I+V+NAL+ Y KCGN+ D+ LF+ M + VS+ ++++GYA+ G
Sbjct: 366 HGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGM 425
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
+++ LF++ML G P +T I VL+AC+ G VE G+ YF +M +++GI P H++
Sbjct: 426 GFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFS 485
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY 476
CMID+L RAG+L EA+ I +PF P W+ LL +CRIHGNVE+ AA LL+LDP
Sbjct: 486 CMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPL 545
Query: 477 NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPY 536
N A YV+L++IY+ G+ + +R+ MR++GV+K PGCSWI+ R+HIF A+D P
Sbjct: 546 NAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPM 605
Query: 537 SDQIYAELEKLNRKMIKEGYVPDMSSVL----HDVELSEKIKMLNHHSEKLAIAFGLLFI 592
+I LE++ RK+ K GY P++ S L V E+ L HHSEKLA++FGL+
Sbjct: 606 IKKIQEYLEEMMRKIKKVGYTPEVRSALVGGDDRVWQREEELRLGHHSEKLAVSFGLMST 665
Query: 593 PPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G PI V KNLR+C DCHNA KYIS++ +REI VRD+ RFH FK+G+CSCG +W
Sbjct: 666 REGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 253/646 (39%), Positives = 372/646 (57%), Gaps = 25/646 (3%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG-- 66
W I A+ G DAV ++ L ++ S + S + ++ + C LG G
Sbjct: 16 WAQQIRAAAAEGHFCDAVSLF-LRMRASAAPRSSVPAS---LPAALKSCAALGLSALGAS 71
Query: 67 -HILKFGFGSYV--FVGSPLVDMYAKLGLIYDAKRGFD--ELPEKNIVMYNTMITGLLRR 121
H L G++ F + L+++Y K+ Y G ++P +
Sbjct: 72 LHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAF----------- 120
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
E R++F M ++D +SW T++ G + G EA+ R+M EG D FT +VL
Sbjct: 121 ---ESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVL 177
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
++ G ++H F RN +VFVGS+L+DMY C Y+ VF + ++ +
Sbjct: 178 PIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHI 237
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
W ++L G QNG EEA+ IF M + G+ P T S+I C NLASL G Q H
Sbjct: 238 LWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYV 297
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ G + +S++L+ Y KCG I +H +F++M+ D VSWTA++ GYA G A E +
Sbjct: 298 ICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREAL 357
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
LFE+M KP+ +T + VL+ACS AGLV+KG YF+ M YGI P +H+ + D
Sbjct: 358 VLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADT 417
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
L RAG L+EA +FI+KM P A W+TLL +CR+H N + + A+ ++EL+P + S+
Sbjct: 418 LGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSH 477
Query: 482 VLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIY 541
V+LS++Y++ G+W+ + LR +MR+KG++KDP CSWI+ KS++H+F A D S P+ D+I
Sbjct: 478 VVLSNMYSASGRWNEAAHLRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRII 537
Query: 542 AELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVV 601
L + +M +EG+VP+ V D+E K +L HSEKLAI FG++ P G IRV+
Sbjct: 538 DALNAFSEQMAREGHVPNTEDVFQDIEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRVM 597
Query: 602 KNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCH TK+ISK+ REI+VRDA RFH FK+G CSCGDFW
Sbjct: 598 KNLRVCIDCHTVTKFISKLADREIVVRDANRFHHFKDGNCSCGDFW 643
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 134/282 (47%), Gaps = 12/282 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D + WN L++G A +GSV +A+ ++ ML+ G+ + +TFS+++ + + +
Sbjct: 231 LPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVP-VTFSSLIPVCGNLASLRF 289
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H +++ GF VF+ S L+DMY K G I A FD++ ++V + MI G
Sbjct: 290 GKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYAL 349
Query: 121 RGLVEESRRLFRGMK----DKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQF 175
G E+ LF M+ + I++ ++T GL + F+ M G+
Sbjct: 350 HGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLE 409
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT- 234
F ++ G L+E + FI + K V S L+ K+ AE V +
Sbjct: 410 HFAALADTLGRAGELDEA---YNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKI 466
Query: 235 --MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD 274
+ +++ S + Y +G EA + +M++ G++ D
Sbjct: 467 MELEPRSIGSHVVLSNMYSASGRWNEAAHLRESMRKKGMKKD 508
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 254/648 (39%), Positives = 377/648 (58%), Gaps = 34/648 (5%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P V+W LI+G +G A+ ++ M +D + + TF S S R +G
Sbjct: 69 PNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSI-QPNDFTFPCAFKASGSLRSPLVG 127
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+Q+H +K G S VFVG DMY+K GL
Sbjct: 128 KQVHALAVKAGQISDVFVGCSAFDMYSKAGL----------------------------- 158
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
EE+R++F M +++ +W ++ + G +A+ F E R EG + TF + L
Sbjct: 159 --TEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFL 216
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
AC G L G+Q+H F++++ + +V V + L+D Y KC + +E +F ++ N V
Sbjct: 217 NACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDV 276
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW +M+V Y QN E+A +F ++ GIEP DF + SV+S+CA L+ LE G H +
Sbjct: 277 SWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLA 336
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ ++ I V +ALV YGKCG+IED+ R F+EM R+ V+W A++ GYA G+A+ +
Sbjct: 337 VKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAV 396
Query: 362 DLFEKML--SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
LF++M SH + P+ VT + VLSACSRAG V G FE M YGI P +HY C++
Sbjct: 397 TLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVV 456
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L RAG +E+A FI KMP P W LL + ++ G E+GK AA++L ELDP +
Sbjct: 457 DLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSG 516
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
++VLLS+++A+ G+W+ + +R+ M++ G++K GCSWI + VH+F A D S + +
Sbjct: 517 NHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSE 576
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
I A L KL +M GY+PD S L D+E EK + +HSEK+A+AFGL+ IP G+PIR
Sbjct: 577 IQAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIR 636
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ KNLR+C DCH+A K+IS I REI+VRD FH F++ +CSC D+W
Sbjct: 637 ITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 684
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 191/401 (47%), Gaps = 33/401 (8%)
Query: 40 LSRITFSTMLIMSSSRRCVDLGRQIHGHILK-FGFGSYVFVGSPLVDMYAKLGLIYDAKR 98
LS + ++++ + S +C LGR H I+K F+ + LV+MY+KL A+
Sbjct: 4 LSPNSLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQL 63
Query: 99 GFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREA 158
P +++V +WT +I G +QNG A
Sbjct: 64 LLSLTPNRSVV-------------------------------TWTALIAGSVQNGRFTSA 92
Query: 159 IDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDM 218
+ F MR + + + FTF A G L + GKQ+HA ++ +VFVG + DM
Sbjct: 93 LFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDM 152
Query: 219 YCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
Y K + A +F M +N+ +W A L G ++A+ F + G EP+ T
Sbjct: 153 YSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITF 212
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
+ +++CA + L G Q HG L +G + ++V+N L+ FYGKC + S +F+ ++
Sbjct: 213 CAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISK 272
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
++VSW +++ Y + + + +F + G++P + + VLSAC+ ++E G+
Sbjct: 273 PNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSV 332
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP 439
+ VK + I + ++D+ + G +E+A+ ++MP
Sbjct: 333 HTLAVKACVVGNIFVG-SALVDMYGKCGSIEDAERAFDEMP 372
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 170/363 (46%), Gaps = 40/363 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +WN +S G +DA+ + +G + ITF L + + L
Sbjct: 169 MPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGW-EPNLITFCAFLNACAGASYLRL 227
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+HG +L+ GF + V V + L+D Y K + G E+
Sbjct: 228 GRQLHGFVLQSGFEADVSVANGLIDFYGKCHQV-----GCSEI----------------- 265
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+F G+ + +SW +MI +QN E +A +F R EG+ F SV
Sbjct: 266 ---------IFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSV 316
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+AC GL LE GK +H ++ N+FVGSALVDMY KC SI+ AE F M +N+
Sbjct: 317 LSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNL 376
Query: 241 VSWTAMLVGYGQNGCSEEAVKIF----CNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
V+W AM+ GY G ++ AV +F C R + P+ T V+S+C+ S+ G +
Sbjct: 377 VTWNAMIGGYAHQGQADMAVTLFDEMTCGSHR--VAPNYVTFVCVLSACSRAGSVNVGME 434
Query: 297 -FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKF 354
F G+ +V G+ G +E +++ +M +R VS W AL+ F
Sbjct: 435 IFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMF 494
Query: 355 GKA 357
GK+
Sbjct: 495 GKS 497
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 132/276 (47%), Gaps = 8/276 (2%)
Query: 179 SVLTACGGLLALEEGKQIHAFIIRN-DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
+V T C L G+ HA II+ D+ F+ + LV+MY K A+ +
Sbjct: 16 AVSTQCSRL-----GRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPN 70
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
++VV+WTA++ G QNG A+ F NM+R+ I+P+DFT + +L S G Q
Sbjct: 71 RSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQV 130
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H ++ G IS + V + Y K G E++ ++F+EM R+ +W A +S G+
Sbjct: 131 HALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRY 190
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
++ + F + G +P+ +T L+AC+ A + GR V + G
Sbjct: 191 DDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQ-LHGFVLQSGFEADVSVANG 249
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+ID + ++ ++ + + P D + W +++ S
Sbjct: 250 LIDFYGKCHQVGCSEIIFSGISKPND-VSWCSMIVS 284
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 246/641 (38%), Positives = 386/641 (60%), Gaps = 31/641 (4%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW L++G+ +G V + ++++ M+ + F+T++ S V G Q HG
Sbjct: 94 VSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHG 153
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+ LK G + +V + L+ MY++ + A + E+P GL
Sbjct: 154 YALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVP-----------------GL--- 193
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
D S+ +I GL++NG EA+++ M E + D T+ + C
Sbjct: 194 -----------DVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSH 242
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L L G Q+H + R + + FV SA++DMY KC +I A VF + KNVVSWTA+
Sbjct: 243 LKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAI 302
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
L Y QNGC EEA+ F M+ +G+ P+++T +++SCA +++L G H R +G
Sbjct: 303 LAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGF 362
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
I V NAL+ Y K G+IE +H++F EM RD ++W+A++ G + G E + +F++
Sbjct: 363 EDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQE 422
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
ML+ P VT +GVLSAC+ G V++G +Y ++K+ GI P +HYTC++ +L +AG
Sbjct: 423 MLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAG 482
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
RL+EA++F+ P D + W TLLS+C +H N +GK AE +L++DP + +Y+LLS+
Sbjct: 483 RLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDVGTYILLSN 542
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
+YA +WD V ++R+ MRE+ V+K+PG SWI+ ++ +H+F ++ + P S+QIY ++++
Sbjct: 543 MYAKAKRWDGVVKIRKLMRERNVKKEPGASWIEIRNSIHVFVSEGKTHPESNQIYEKVQE 602
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
L + GYVPD+++V HDVE +K + +++HSEKLAIA+GL+ P G PIRV+KNLR+
Sbjct: 603 LLTMIRPMGYVPDIAAVFHDVEDEQKREYVSYHSEKLAIAYGLMKTPSGAPIRVIKNLRM 662
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCH+A K ISK+T R I+VRDA RFH F +G CSC D+W
Sbjct: 663 CVDCHSAVKLISKVTNRMIIVRDANRFHCFGDGGCSCADYW 703
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 213/423 (50%), Gaps = 19/423 (4%)
Query: 101 DELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAID 160
++ + NIV N++I + + +R LF GM+ ++ +SW ++ G NGL E +
Sbjct: 55 NQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAGYFHNGLVLEVLR 114
Query: 161 LFREM-RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMY 219
LF+ M ++ + +++ F +++++C + EG Q H + +++ + +V +AL+ MY
Sbjct: 115 LFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMY 174
Query: 220 CKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLG 279
+ +K A SV+ + +V S+ ++ G +NG EA+++ M I D+ T
Sbjct: 175 SRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYV 234
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
+ C++L L G Q H R TG VS+A++ YGKCGNI ++ ++FN + +
Sbjct: 235 TAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTK 294
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
+ VSWTA+++ Y++ G E ++ F +M GL P+E T +L++C+ + G+
Sbjct: 295 NVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGK-LL 353
Query: 400 EIMVKEYGIRPIHDHY---TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRI 456
+K+ G DH +I++ S++G +E A +M D+I W+ ++
Sbjct: 354 HTRIKKSGFE---DHIIVGNALINMYSKSGSIEAAHKVFLEM-ICRDSITWSAMICGLSH 409
Query: 457 HGNVEIGKWAAESLLE-LDPYNPASYVLLSSIYASKGKWDHVSQ----LRRTMREKGVRK 511
HG +G+ A E L YV + ++ V + L + M++ G+
Sbjct: 410 HG---LGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGI-- 464
Query: 512 DPG 514
+PG
Sbjct: 465 EPG 467
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 185/372 (49%), Gaps = 37/372 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D S+N++I+G +G ++A++V + M+ + + +T+ T + S + + L
Sbjct: 190 VPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECI-VWDNVTYVTAFGLCSHLKDLRL 248
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+H + + G FV S ++DMY K G I +A++ F+ L KN+V + ++ +
Sbjct: 249 GLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQ 308
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G E EA++ F EM ++GL +++TF +
Sbjct: 309 NGCFE-------------------------------EALNFFPEMEVDGLLPNEYTFAVL 337
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L +C G+ AL GK +H I ++ +D++ VG+AL++MY K SI+ A VF M ++
Sbjct: 338 LNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDS 397
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
++W+AM+ G +G EA+ +F M P T V+S+CA+L S++EG + +
Sbjct: 398 ITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQ 457
Query: 301 SL-VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG---YAKFG 355
+ TG+ + +V K G ++++ V+ D V+W L+S + +G
Sbjct: 458 LMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYG 517
Query: 356 KANETIDLFEKM 367
+ +L +M
Sbjct: 518 LGKKVAELVLQM 529
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 159/310 (51%), Gaps = 23/310 (7%)
Query: 190 LEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
L+ GK IHA +I + KDN+ ++L+++Y KC I A +F M +NVVSW A++
Sbjct: 41 LKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALM 100
Query: 248 VGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
GY NG E +++F M + + P+++ ++ISSC++ + EG Q HG +L +GL
Sbjct: 101 AGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGL 160
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ V NAL+ Y + +++ + ++ E+ D S+ +++G + G +E +++ ++
Sbjct: 161 VFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDR 220
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--TCMIDILSR 424
M+ + D VT + CS + G ++ + + +D + + +ID+ +
Sbjct: 221 MVDECIVWDNVTYVTAFGLCSHLKDLRLG---LQVHCRMFRTGAEYDSFVSSAIIDMYGK 277
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL-----LELDPYNPA 479
G + A+ N++ + + W +L++ +G E E+L +E+D P
Sbjct: 278 CGNILNARKVFNRLQ-TKNVVSWTAILAAYSQNGCFE------EALNFFPEMEVDGLLPN 330
Query: 480 SY---VLLSS 486
Y VLL+S
Sbjct: 331 EYTFAVLLNS 340
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 257/680 (37%), Positives = 391/680 (57%), Gaps = 70/680 (10%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D SWN +I H+ G + A++++ M D N + T+ ++ S+ + GR+I
Sbjct: 172 DETSWNAVILAHSQSGDWSGALRIFKEMKCDMKPNST--TYINVISGFSTPEVLPEGRKI 229
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H I+ GF S + V + L++MY K G ++A+ FD+
Sbjct: 230 HAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDK---------------------- 267
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
MK +D +SW MI +QNG EA++L++++ +EG + TF S+L AC
Sbjct: 268 ---------MKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGAC 318
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM------AW- 237
+ AL +G+ +H+ I+ V V +ALV+MY KC S++ A VF M AW
Sbjct: 319 SSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWS 378
Query: 238 ---------------------------KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQ-RN 269
++ + W AM+ Y QNGC+ A+KIF M
Sbjct: 379 TLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAA 438
Query: 270 GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
G++PD T +V+ +CA+L L E H + + L S + V+N L+ Y +CG++E++
Sbjct: 439 GLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEA 498
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
RLF + VSWTA+V+ ++++G+ E +DLF++M G+KPD+VT +L C+
Sbjct: 499 ERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHG 558
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
G +E+G YF M + +G+ P DH+ M+D+L R+GRL +AK + MPF PD + W T
Sbjct: 559 GSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMT 618
Query: 450 LLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
L++CRIHG +E+G+ AAE + ELDP + A Y+ +S+IYA+ G W+ V+ +R+ M E+G+
Sbjct: 619 FLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGL 678
Query: 510 RKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVEL 569
+K PG S+I+ ++H FS+ P +D+I EL +L+ M GYVPD +VLHDV
Sbjct: 679 KKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSE 738
Query: 570 SEKIKMLNHHSEKLAIAFGLLFIP-PGLPIRVVKNLRVCSDCHNATKYISKITQREILVR 628
EK ML +HSEK+AIAFGL+ G PIRVVKNLRVCSDCH ATK+I++I R+I++R
Sbjct: 739 GEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDIILR 798
Query: 629 DAVRFHLF-KNGECSCGDFW 647
D RFH F +G+CSCGD+W
Sbjct: 799 DCNRFHRFSSDGKCSCGDYW 818
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 204/411 (49%), Gaps = 35/411 (8%)
Query: 43 ITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDE 102
+TF T+L SS V GR +H I F VG+ L+ MY K + DA+ F+
Sbjct: 8 VTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFES 67
Query: 103 LPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLF 162
+ + ++ +SW MI QNG EA+ L+
Sbjct: 68 MD-----------------------------WRQRNVVSWNAMIAAYAQNGHSTEALVLY 98
Query: 163 REMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC 222
M L+GL D TF SVL AC +L +G++IH + + + +ALV MY +
Sbjct: 99 WRMNLQGLGTDHVTFVSVLGACS---SLAQGREIHNRVFYSGLDSFQSLANALVTMYARF 155
Query: 223 KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
S+ A+ +F+++ ++ SW A+++ + Q+G A++IF M+ + ++P+ T +VI
Sbjct: 156 GSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCD-MKPNSTTYINVI 214
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
S + L EG + H + G S + V+ AL+ YGKCG+ ++ +F++M RD V
Sbjct: 215 SGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMV 274
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
SW ++ Y + G +E ++L++K+ G K + T + +L ACS + +GR
Sbjct: 275 SWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGR-LVHSH 333
Query: 403 VKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+ E G+ T ++++ ++ G LEEA+ N M DA+ W+TL+ +
Sbjct: 334 ILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMK-NRDAVAWSTLIGA 383
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 157/282 (55%), Gaps = 10/282 (3%)
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
D TF +VL +C + EG+ +H I + + + VG+AL+ MY KC S+ A SVF
Sbjct: 6 DNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65
Query: 233 RTMAWK--NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS 290
+M W+ NVVSW AM+ Y QNG S EA+ ++ M G+ D T SV+ +C++LA
Sbjct: 66 ESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA- 124
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
+G + H R +GL SF +++NALVT Y + G++ D+ R+F + RDE SW A++
Sbjct: 125 --QGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILA 182
Query: 351 YAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH-YFEIMVKEYGIR 409
+++ G + + +F++M +KP+ T I V+S S ++ +GR + EI+ +
Sbjct: 183 HSQSGDWSGALRIFKEMKCD-MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSD 241
Query: 410 PIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
+ T +I++ + G EA+ +KM D + W ++
Sbjct: 242 LV--VATALINMYGKCGSSHEAREVFDKMK-KRDMVSWNVMI 280
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 121/262 (46%), Gaps = 21/262 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D V+W+ LI +AS+G DA K + D LG+ I ++ M+ C
Sbjct: 369 MKNRDAVAWSTLIGAYASNGYGKDARKARKVF--DRLGSRDTICWNAMITTYVQNGCAVA 426
Query: 61 GRQIHGHIL-KFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP----EKNIVMYNTMI 115
+I + G +++ A LG + + K ++ E N+V+ NT+I
Sbjct: 427 AMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLI 486
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
R G +EE+ RLF K+K +SWT M+ Q G EA+DLF+EM LEG+ D
Sbjct: 487 NMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDV 546
Query: 176 TFGSVLTACGGLLALEEG-------KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYA 228
T+ S+L C +LE+G ++H DH +A+VD+ + + A
Sbjct: 547 TYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHF------AAMVDLLGRSGRLFDA 600
Query: 229 ESVFRTMAWK-NVVSWTAMLVG 249
+ + +M ++ + V+W L
Sbjct: 601 KELLESMPFEPDPVAWMTFLTA 622
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 11/184 (5%)
Query: 272 EPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHR 331
+PD+ T +V+ SC++ + EG H R + V NAL++ YGKC ++ D+
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 332 LFNEMN--VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
+F M+ R+ VSW A+++ YA+ G + E + L+ +M GL D VT + VL ACS
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS- 122
Query: 390 GLVEKGRHYFEIMVKEY--GIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGW 447
+ +GR EI + + G+ ++ + +R G + +AK + D W
Sbjct: 123 --LAQGR---EIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQ-TRDETSW 176
Query: 448 ATLL 451
++
Sbjct: 177 NAVI 180
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 255/645 (39%), Positives = 391/645 (60%), Gaps = 36/645 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL-GRQ 63
D +SWN ++SG +G ++A++ Y+ M +D G + +I +S+R L G Q
Sbjct: 383 DTISWNSMLSGFVQNGLYHEALQFYHEM-RDA-GQKPDLVAVISIIAASARSGNTLNGMQ 440
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
IH + +K G S + VG+ LVDMYAK + FD++P+K++V + T+
Sbjct: 441 IHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTI--------- 491
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
I G QNG A++LFRE++LEG+ +D S+L A
Sbjct: 492 ----------------------IAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLA 529
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C GL + K+IH++IIR D V + + +VD+Y +C ++ YA +F + +K+VVSW
Sbjct: 530 CSGLKLISSVKEIHSYIIRKGLSDLV-LQNGIVDVYGECGNVDYAARMFELIEFKDVVSW 588
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
T+M+ Y NG + EA+++F M+ G+EPD +L S++S+ A+L++L++G + HG +
Sbjct: 589 TSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIR 648
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
G + ++++ LV Y +CG +E S +FN + +D V WT++++ Y G IDL
Sbjct: 649 KGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDL 708
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F +M + PD + + VL ACS +GL+ +GR + E M EY + P +HY C++D+L
Sbjct: 709 FRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLG 768
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
RA LEEA F+ M P A W LL +C+IH N E+G+ AA+ LLE+DP NP +YVL
Sbjct: 769 RANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVL 828
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
+S++YA++ +W V ++R M+ G++K+PGCSWI+ ++VH F A D S P S +IY++
Sbjct: 829 VSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSK 888
Query: 544 LEKLNRKMIKE-GYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVK 602
L ++ K+ KE GYV VLH+ + EK++ML HSE+LAIA+G+L P G +R+ K
Sbjct: 889 LSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITK 948
Query: 603 NLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
NLRVC DCHN K ISK +RE+++RDA RFH FK G CSCGD W
Sbjct: 949 NLRVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 993
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 139/454 (30%), Positives = 239/454 (52%), Gaps = 35/454 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSWN +IS ++S+G +A++++ M K L + TF L + G I
Sbjct: 282 DVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAP-NTYTFVAALQACEDSSFIKQGMFI 340
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +LK + VFV + L+ MYA+ G K G
Sbjct: 341 HATVLKSSYYINVFVANALIAMYARFG-----KMG------------------------- 370
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
E+ +F M D D+ISW +M++G +QNGL EA+ + EMR G D S++ A
Sbjct: 371 -EAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAAS 429
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G QIHA+ ++N ++ VG++LVDMY K S+KY + +F M K+VVSWT
Sbjct: 430 ARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWT 489
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++ G+ QNG A+++F +Q GI+ D + S++ +C+ L + + H +
Sbjct: 490 TIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRK 549
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
GL S + + N +V YG+CGN++ + R+F + +D VSWT+++S Y G ANE ++LF
Sbjct: 550 GL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELF 608
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
M G++PD ++L+ +LSA + ++KG+ ++++ G + ++D+ +R
Sbjct: 609 HLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRK-GFVLEGSLASTLVDMYAR 667
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
G LE++++ N + D + W +++++ +HG
Sbjct: 668 CGTLEKSRNVFNFIR-NKDLVLWTSMINAYGMHG 700
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 128/463 (27%), Positives = 232/463 (50%), Gaps = 41/463 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLI---MSSSRRC 57
MP +WN +I + ++G ++++Y M G+ L TF +L + RRC
Sbjct: 176 MPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIP-LDACTFPCILKACGLLKDRRC 234
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
G ++HG +K G+ S VFV + +V MY K + A++ FD +PEK
Sbjct: 235 ---GAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEK----------- 280
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
+D +SW +MI+ NG EA+ LF EM+ LA + +TF
Sbjct: 281 -------------------EDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTF 321
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
+ L AC +++G IHA ++++ + NVFV +AL+ MY + + A ++F M
Sbjct: 322 VAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDD 381
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
+ +SW +ML G+ QNG EA++ + M+ G +PD + S+I++ A + G Q
Sbjct: 382 WDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQI 441
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H ++ GL S + V N+LV Y K +++ +F++M +D VSWT +++G+A+ G
Sbjct: 442 HAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSH 501
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
+ ++LF ++ G+ D + + +L ACS L+ + ++++ G+ +
Sbjct: 502 SRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRK-GLSDLVLQ-NG 559
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
++D+ G ++ A + F D + W +++ SC +H +
Sbjct: 560 IVDVYGECGNVDYAARMFELIEF-KDVVSWTSMI-SCYVHNGL 600
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/442 (27%), Positives = 217/442 (49%), Gaps = 47/442 (10%)
Query: 20 GSVNDAVKVYNLMLKDGLGNLSRITFS------TMLIMSSSRRCVDLGRQIHGHILKFG- 72
GSVN+A + L D N S FS ++L + S++ + G+Q+H H++
Sbjct: 90 GSVNEAFQS----LTDLFANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNA 145
Query: 73 -FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLF 131
F S VF+ + LV MY K G + DA++ FD
Sbjct: 146 LFNS-VFLSTRLVFMYGKCGCLVDAEKLFD------------------------------ 174
Query: 132 RGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALE 191
GM K +W MI + NG +++L+REMR+ G+ +D TF +L ACG L
Sbjct: 175 -GMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRR 233
Query: 192 EGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK-NVVSWTAMLVGY 250
G ++H I+ + VFV +++V MY KC + A +F M K +VVSW +M+ Y
Sbjct: 234 CGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAY 293
Query: 251 GQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFI 310
NG S EA+++F MQ+ + P+ +T + + +C + + +++G H L + +
Sbjct: 294 SSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINV 353
Query: 311 TVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH 370
V+NAL+ Y + G + ++ +F M+ D +SW +++SG+ + G +E + + +M
Sbjct: 354 FVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDA 413
Query: 371 GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEE 430
G KPD V +I +++A +R+G G +K G+ ++D+ ++ ++
Sbjct: 414 GQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKN-GLDSDLQVGNSLVDMYAKFCSMKY 472
Query: 431 AKSFINKMPFPPDAIGWATLLS 452
+KMP D + W T+++
Sbjct: 473 MDCIFDKMP-DKDVVSWTTIIA 493
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 179/350 (51%), Gaps = 35/350 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSW +I+GHA +GS + A++++ + +G+ +L + S++L+ S + +
Sbjct: 480 MPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGI-DLDVMMISSILLACSGLKLISS 538
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
++IH +I++ G V + + +VD+Y + G
Sbjct: 539 VKEIHSYIIRKGLSDLV-LQNGIVDVYGECGN---------------------------- 569
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
V+ + R+F ++ KD +SWT+MI+ + NGL EA++LF M+ G+ D + S+
Sbjct: 570 ---VDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSI 626
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+A L AL++GK+IH F+IR + S LVDMY +C +++ + +VF + K++
Sbjct: 627 LSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDL 686
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF-HG 299
V WT+M+ YG +GC A+ +F M+ I PD +V+ +C++ + EG +F
Sbjct: 687 VLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLES 746
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALV 348
L + LV G+ ++E++++ M V W AL+
Sbjct: 747 MKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALL 796
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 251/656 (38%), Positives = 396/656 (60%), Gaps = 46/656 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +WN ++SG + +AV ++ M+ +G+ +T S++L M CV L
Sbjct: 130 MRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAG-DAVTVSSVLPM-----CVLL 183
Query: 61 GRQ-----IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
G + +H + +K G +FV + ++D+Y KLG++ + ++ FD + +++V +N++I
Sbjct: 184 GDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSII 243
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
+G + G V + +F GM+D +G+ + + L
Sbjct: 244 SGHEQGGQVASAVEMFCGMRD---------------SGVSPDVLTL-------------L 275
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRND-HKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
+ S + CG + G+ +H +++R ++ G+A+VDMY K I+ A+ +F +
Sbjct: 276 SLASAIAQCGDICG---GRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDS 332
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN-GIEPDDFTLGSVISSCANLASLEE 293
M ++ VSW ++ GY QNG + EA+ ++ +MQ++ G++P T SV+ + ++L +L++
Sbjct: 333 MPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQ 392
Query: 294 GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK 353
GT+ H S+ TGL + V ++ Y KCG ++++ LF + R W A++SG
Sbjct: 393 GTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGV 452
Query: 354 FGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
G + + LF +M G+ PD VT + +L+ACS AGLV++GR++F +M YGI+PI
Sbjct: 453 HGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAK 512
Query: 414 HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL 473
HY CM+D+ RAG+L++A FI MP PD+ W LL +CRIHGNVE+GK A+++L EL
Sbjct: 513 HYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFEL 572
Query: 474 DPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWS 533
DP N YVL+S++YA GKWD V ++R +R + ++K PG S I+ K V++F + +
Sbjct: 573 DPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQM 632
Query: 534 S--PYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLF 591
+ P ++I EL L K+ GYVPD S VL DVE EK ++LN+HSE+LAIAFG++
Sbjct: 633 NIHPQHEEIQRELLDLLAKIRSLGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIIN 692
Query: 592 IPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
PP P+ + KNLRVC DCHNATKYISKIT+REI+VRD+ RFH FK+G CSCGDFW
Sbjct: 693 TPPRTPLHIYKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGYCSCGDFW 748
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 143/282 (50%), Gaps = 7/282 (2%)
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIR-NDHKDNVFVGSALVDMYCKCKSIKYAESV 231
D FTF +L A G Q+HA +R + + F ALV Y + ++ A
Sbjct: 70 DAFTFPPLLRAAQGP---GTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRA 126
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASL 291
F M ++V +W AML G +N + EAV +F M G+ D T+ SV+ C L
Sbjct: 127 FDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDR 186
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
H ++ GL + V NA++ YGK G +E+ ++F+ M+ RD V+W +++SG+
Sbjct: 187 ALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGH 246
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE-YGIRP 410
+ G+ +++F M G+ PD +TL+ + SA ++ G + GR MV+ + +
Sbjct: 247 EQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGD 306
Query: 411 IHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
I ++D+ ++ ++E A+ + MP DA+ W TL++
Sbjct: 307 IIAG-NAIVDMYAKLSKIEAAQRMFDSMPV-RDAVSWNTLIT 346
>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 695
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 254/649 (39%), Positives = 389/649 (59%), Gaps = 34/649 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW L+SG + DA+ ++ M + GL ++ S+ +++
Sbjct: 79 MPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVP-TQFALSSAARAAAALAARHA 137
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+H ++ GF + +FV S L DMY+K GL+ +A R FD+
Sbjct: 138 GAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQ------------------ 179
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL-AMDQFTFGS 179
M KD+++WT MI G +NG A+ FR+MR EGL DQ S
Sbjct: 180 -------------MPQKDAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCS 226
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT-MAWK 238
VL+A GGL + IH+ ++++ + V V +AL DMY K + A V +
Sbjct: 227 VLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSL 286
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
NVVS T+++ GY + C E+A+ +F ++R G+EP++FT S+I CA A LE+G Q H
Sbjct: 287 NVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLH 346
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
+ T LIS VS+ L+ YGKCG I S +LF E+ +++W A ++ A+ G
Sbjct: 347 AEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGR 406
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
E I F++M S G++P+ +T + +L+ACS AGLV++G YF M +GI P +HY+C+
Sbjct: 407 EAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCI 466
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
ID+ RAGRL+EA+ FI +MP P+A GW +LL +CR+ GN E+G+ AA+++++L+P N
Sbjct: 467 IDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACRMRGNKELGEIAADNMMKLEPDNT 526
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
+V LS IYAS G+W+ V +R+ MR+ ++K PG SW+ + H+F ++DWS P +
Sbjct: 527 GVHVSLSGIYASLGQWEDVKAVRKLMRDNRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQE 586
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
+IY +LE+L ++ +EGYVPD + ++E + K ++L +HSE++A+AF L+ +P PI
Sbjct: 587 KIYEKLEELYERIKEEGYVPDTRFLPCNLEDTAKQRILRYHSERIAVAFALISMPATKPI 646
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V KNLR+C+DCH+A K+ISK+ R+I+VRD RFH F G CSCGD+W
Sbjct: 647 IVKKNLRICADCHSALKFISKVENRDIIVRDNSRFHHFVKGGCSCGDYW 695
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 124/479 (25%), Positives = 202/479 (42%), Gaps = 69/479 (14%)
Query: 60 LGRQIHGH-ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
LGR +H +L + F+ + L+ MY+ + A R FD +P N+V
Sbjct: 35 LGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAMPRPNLV--------- 85
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
SWTT+++GL QN + R+A+ F M GL QF
Sbjct: 86 ----------------------SWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALS 123
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
S A L A G Q+H +R +FV S L DMY K + A VF M K
Sbjct: 124 SAARAAAALAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQK 183
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQF 297
+ V+WTAM+ GY +NG E AV F +M+R G + D L SV+S+ L
Sbjct: 184 DAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAI 243
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN-EMNVRDEVSWTALVSGYAKFGK 356
H + +G + V NAL Y K +++++ R+ + + VS T+L+ GY +
Sbjct: 244 HSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDC 303
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE----------- 405
+ + +F ++ G++P+E T ++ C+ L+E+G ++K
Sbjct: 304 IEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSST 363
Query: 406 ----YG-----------IRPIHDH----YTCMIDILSRAGRLEEAKSFINKMP---FPPD 443
YG + I H + I++L++ G EA ++M P+
Sbjct: 364 LLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPN 423
Query: 444 AIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS--YVLLSSIYASKGKWDHVSQL 500
I + +LL++C G V+ G S+ + P Y + +Y G+ D +
Sbjct: 424 HITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKF 482
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 256/647 (39%), Positives = 376/647 (58%), Gaps = 32/647 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V+WN L++G+A +G A+++ M ++ IT ++L ++ R +
Sbjct: 120 MPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAA 179
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
R+ H ++ G V V + ++D Y K G I A+ FD +P KN
Sbjct: 180 CREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKN------------- 226
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
S+SW MI G QNG REA+ LF M EG+ + + +
Sbjct: 227 ------------------SVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAA 268
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L ACG L L+EG ++H ++R NV V +AL+ MY KCK + A VF + +
Sbjct: 269 LQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQ 328
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW AM++G QNGCSE+AV++F MQ ++PD FTL SVI + A+++ + HG
Sbjct: 329 VSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGY 388
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
S+ L + V AL+ Y KCG + + LFN R ++W A++ GY G
Sbjct: 389 SIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAA 448
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++LFE+M S G+ P+E T + VLSACS AGLV++GR YF M ++YG+ P +HY M+D
Sbjct: 449 VELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVD 508
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG+L+EA +FI KMP P + +L +C++H NVE+ + +A+ + EL P
Sbjct: 509 LLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVY 568
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
+VLL++IYA+ W V+++R M + G++K PG S I+ K+ +H F + + + +I
Sbjct: 569 HVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEI 628
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y+ L KL ++ GYVPD S+ HDVE K ++LN HSEKLAIAFGL+ PG I++
Sbjct: 629 YSRLAKLIEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQI 687
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC+DCHNATK IS +T REI++RD RFH FK+G+CSCGD+W
Sbjct: 688 KKNLRVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 141/472 (29%), Positives = 227/472 (48%), Gaps = 49/472 (10%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
TF+++L + ++R + GR +H + G S + L +MYAK DA+R FD +
Sbjct: 61 TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRM 120
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
P + D ++W ++ G +NGL R A+++
Sbjct: 121 PVR-------------------------------DRVAWNALVAGYARNGLARMAMEMVV 149
Query: 164 EMR-LEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC 222
M+ EG D T SVL AC AL ++ HAF IR+ ++ V V +A++D YCKC
Sbjct: 150 RMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKC 209
Query: 223 KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
I+ A VF M KN VSW AM+ GY QNG S EA+ +F M G++ D ++ + +
Sbjct: 210 GDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAAL 269
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
+C L L+EG + H + GL S ++V NAL+T Y KC ++ + +F+E++ R +V
Sbjct: 270 QACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQV 329
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
SW A++ G A+ G + + + LF +M +KPD TL+ V+ A + + R
Sbjct: 330 SWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQAR-----W 384
Query: 403 VKEYGIRPIHDH----YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ Y IR D T +ID+ ++ GR+ A+ N I W ++ HG
Sbjct: 385 IHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNS-ARERHVITWNAMIHGYGSHG 443
Query: 459 NVEIGKWAAESLLELDPY----NPASYVLLSSIYASKGKWDHVSQLRRTMRE 506
GK A E E+ N +++ + S + G D + +M+E
Sbjct: 444 ---FGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKE 492
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 3/202 (1%)
Query: 259 AVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVT 318
A+ F M G P T S++ CA L G H + G+ S + AL
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 319 FYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML-SHGLKPDEV 377
Y KC D+ R+F+ M VRD V+W ALV+GYA+ G A +++ +M G +PD +
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 378 TLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINK 437
TL+ VL AC+ A + R ++ G+ + + T ++D + G + A+ +
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRS-GLEELVNVATAILDAYCKCGDIRAARVVFDW 221
Query: 438 MPFPPDAIGWATLLSSCRIHGN 459
MP +++ W ++ +G+
Sbjct: 222 MP-TKNSVSWNAMIDGYAQNGD 242
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 259/650 (39%), Positives = 400/650 (61%), Gaps = 11/650 (1%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRI--TFSTMLIMSSSRRCVDLGR 62
+ +SWN +IS ++ G A +++ M K+GLG + FS ++ RR GR
Sbjct: 268 NSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEEGRR---KGR 324
Query: 63 QIHGHILKFGFG-SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
++H H+++ G + V +G+ LV+MYAK G I DA F+ + EK+ V +N++I+GL +
Sbjct: 325 EVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQN 384
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLE-REAIDLFREMRLEGLAMDQFTFGSV 180
E++ +F M + D +SW ++I L + +A+ F +M G + + TF ++
Sbjct: 385 ECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINI 444
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA-WKN 239
L+A L E QIHA +++ D+ +G+AL+ Y KC + E +F M+ ++
Sbjct: 445 LSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRD 504
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VSW +M+ GY N +A+ + M + G D FT +++S+CA++A+LE G + H
Sbjct: 505 EVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHA 564
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ L S + V +ALV Y KCG I+ + R F M +R+ SW +++SGYA+ G +
Sbjct: 565 CGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEK 624
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ LF +M+ G PD VT +GVLSACS G VE+G +F+ M + Y + P +H++CM+
Sbjct: 625 ALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMV 684
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS-CRIHG-NVEIGKWAAESLLELDPYN 477
D+L RAG+L+E FIN MP P+ + W T+L + CR +G N E+G+ AAE LLEL+P N
Sbjct: 685 DLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQN 744
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
+YVLL+++YAS KW+ V++ R M+E V+K+ GCSW+ K VH+F A D P
Sbjct: 745 AVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEK 804
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
D IY +L +LNRKM GY+P L D+EL K ++L++HSEK+A+AF +L LP
Sbjct: 805 DLIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSALP 863
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
IR++KNLRVC DCH+A YISKI R+I++RD+ RFH F++G+CSCGD+W
Sbjct: 864 IRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 913
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 177/344 (51%), Gaps = 33/344 (9%)
Query: 1 MPFHDGVSWNLLISGHA-SHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
MP +D VSWN +I + S SV+ AVK + M++ G G LSR+TF +L SS +
Sbjct: 397 MPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWG-LSRVTFINILSAVSSLSLHE 455
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+ QIH +LK+ +G+ L+ Y K G + + ++ F + E
Sbjct: 456 VSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSET------------- 502
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+D +SW +MI+G + N L +A+DL M +G +D FTF +
Sbjct: 503 -----------------RDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFAT 545
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L+AC + LE G ++HA IR + +V VGSALVDMY KC I YA F M +N
Sbjct: 546 ILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRN 605
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FH 298
V SW +M+ GY ++G E+A+K+F M +G PD T V+S+C+++ +EEG + F
Sbjct: 606 VYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFK 665
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
S V L + + +V G+ G +++ N M ++ V
Sbjct: 666 SMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNV 709
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 150/522 (28%), Positives = 235/522 (45%), Gaps = 88/522 (16%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDG-LGNLSRITFSTMLIMSSSRRCVDLGRQIH 65
V+W LISG+ +G ++A + M++ G + N + S LG QIH
Sbjct: 166 VTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIH 225
Query: 66 GHILKFGFGSYVFVGSPLVDMYAK-LGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
G I K +GS V V + L+ MY L DA+ FD + +N + +N++I+ RRG
Sbjct: 226 GLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRG-- 283
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM-----DQFTFGS 179
D++S A DLF M+ EGL D F+ S
Sbjct: 284 -------------DAVS----------------AYDLFSSMQKEGLGFSFKPNDAFSEFS 314
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDN-VFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
VL +G+++HA +IR DN V +G+ LV+MY K +I A SVF M K
Sbjct: 315 VLEE-----GRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEK 369
Query: 239 NVVSWTAMLVGYGQNGCSE--------------------------------EAVKIFCNM 266
+ VSW +++ G QN CSE +AVK F M
Sbjct: 370 DSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQM 429
Query: 267 QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
R G T +++S+ ++L+ E Q H L L + NAL++ YGKCG +
Sbjct: 430 MRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEM 489
Query: 327 EDSHRLFNEMN-VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+ ++F M+ RDEVSW +++SGY ++ +DL M+ G + D T +LSA
Sbjct: 490 NECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSA 549
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHY----TCMIDILSRAGRLEEAKSFINKMPFP 441
C+ +E+G + V GIR + + ++D+ S+ GR++ A F MP
Sbjct: 550 CASVATLERG-----MEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPL- 603
Query: 442 PDAIGWATLLSSCRIHGNVEIG-KWAAESLLELDPYNPASYV 482
+ W +++S HG+ E K +L+ P + ++V
Sbjct: 604 RNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFV 645
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 134/577 (23%), Positives = 238/577 (41%), Gaps = 98/577 (16%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
TF +++ C + R++H +K+GF +F+ + L+++Y ++G + A++ FDE+
Sbjct: 101 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 160
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
+N+V + +I+G QNG EA FR
Sbjct: 161 SNRNLVTWACLISG-------------------------------YTQNGKPDEACARFR 189
Query: 164 EMRLEGLAMDQFTFGSVLTAC--GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK 221
+M G + + FGS L AC G + G QIH I + + +V V + L+ MY
Sbjct: 190 DMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGS 249
Query: 222 C-KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGI----EPDD- 275
C S A SVF + +N +SW +++ Y + G + A +F +MQ+ G+ +P+D
Sbjct: 250 CLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDA 309
Query: 276 FTLGSVISSCANLASLEEGTQFHGRSLVTGL-ISFITVSNALVTFYGKCGNIEDSHRLFN 334
F+ SV+ +G + H + TGL + + + N LV Y K G I D+ +F
Sbjct: 310 FSEFSVLEE-----GRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFE 364
Query: 335 EMNVRDEVSWTALVSGYAKF--------------------------------GKANETID 362
M +D VSW +L+SG + ++ +
Sbjct: 365 LMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVK 424
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL 422
F +M+ G VT I +LSA S L E H +V +Y + ++
Sbjct: 425 YFLQMMRGGWGLSRVTFINILSAVSSLSLHEVS-HQIHALVLKYCLSDDTAIGNALLSCY 483
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSC----RIHGNVEIGKWAAESLLELDPYNP 478
+ G + E + +M D + W +++S +H +++ + + LD +
Sbjct: 484 GKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTF 543
Query: 479 ASYVLLSSIYAS--KGKWDHVSQLRRTMREKGVRKDP------GCSWIKYKSRV------ 524
A+ + + A+ +G H +R + V C I Y SR
Sbjct: 544 ATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPL 603
Query: 525 -HIFSADDWSSPYSDQIYAELE-KLNRKMIKEGYVPD 559
+++S + S Y+ + E KL +M+ +G PD
Sbjct: 604 RNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPD 640
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 15/128 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + SWN +ISG+A HG A+K++ M+ DG +TF +L S V+
Sbjct: 601 MPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPP-DHVTFVGVLSACSHVGFVEE 659
Query: 61 GRQIHGHILKFGFGSYVFVGSP-------LVDMYAKLGLIYDAKRGFDELPEK-NIVMYN 112
G + F S V+ SP +VD+ + G + + + +P K N++++
Sbjct: 660 GFE------HFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWR 713
Query: 113 TMITGLLR 120
T++ R
Sbjct: 714 TVLGACCR 721
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 256/647 (39%), Positives = 376/647 (58%), Gaps = 32/647 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V+WN L++G+A +G A+++ M ++ IT ++L ++ R +
Sbjct: 120 MPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAA 179
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
R+ H ++ G V V + ++D Y K G I A+ FD +P KN
Sbjct: 180 CREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKN------------- 226
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
S+SW MI G QNG REA+ LF M EG+ + + +
Sbjct: 227 ------------------SVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAA 268
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L ACG L L+EG ++H ++R NV V +AL+ MY KCK + A VF + +
Sbjct: 269 LQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQ 328
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW AM++G QNGCSE+AV++F MQ ++PD FTL SVI + A+++ + HG
Sbjct: 329 VSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGY 388
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
S+ L + V AL+ Y KCG + + LFN R ++W A++ GY G
Sbjct: 389 SIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAA 448
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++LFE+M S G+ P+E T + VLSACS AGLV++GR YF M ++YG+ P +HY M+D
Sbjct: 449 VELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVD 508
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG+L+EA +FI KMP P + +L +C++H NVE+ + +A+ + EL P
Sbjct: 509 LLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVY 568
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
+VLL++IYA+ W V+++R M + G++K PG S I+ K+ +H F + + + +I
Sbjct: 569 HVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEI 628
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y+ L KL ++ GYVPD S+ HDVE K ++LN HSEKLAIAFGL+ PG I++
Sbjct: 629 YSRLAKLIEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQI 687
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC+DCHNATK IS +T REI++RD RFH FK+G+CSCGD+W
Sbjct: 688 KKNLRVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 141/472 (29%), Positives = 227/472 (48%), Gaps = 49/472 (10%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
TF+++L + ++R + GR +H + G S + L +MYAK DA+R FD +
Sbjct: 61 TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRM 120
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
P + D ++W ++ G +NGL R A+++
Sbjct: 121 PVR-------------------------------DRVAWNALVAGYARNGLARMAMEMVV 149
Query: 164 EMR-LEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC 222
M+ EG D T SVL AC AL ++ HAF IR+ ++ V V +A++D YCKC
Sbjct: 150 RMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKC 209
Query: 223 KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
I+ A VF M KN VSW AM+ GY QNG S EA+ +F M G++ D ++ + +
Sbjct: 210 GDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAAL 269
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
+C L L+EG + H + GL S ++V NAL+T Y KC ++ + +F+E++ R +V
Sbjct: 270 QACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQV 329
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
SW A++ G A+ G + + + LF +M +KPD TL+ V+ A + + R
Sbjct: 330 SWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQAR-----W 384
Query: 403 VKEYGIRPIHDH----YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ Y IR D T +ID+ ++ GR+ A+ N I W ++ HG
Sbjct: 385 IHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNS-ARERHVITWNAMIHGYGSHG 443
Query: 459 NVEIGKWAAESLLELDPY----NPASYVLLSSIYASKGKWDHVSQLRRTMRE 506
GK A E E+ N +++ + S + G D + +M+E
Sbjct: 444 ---FGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKE 492
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 3/202 (1%)
Query: 259 AVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVT 318
A+ F M G P T S++ CA L G H + G+ S + AL
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 319 FYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML-SHGLKPDEV 377
Y KC D+ R+F+ M VRD V+W ALV+GYA+ G A +++ +M G +PD +
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 378 TLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINK 437
TL+ VL AC+ A + R ++ G+ + + T ++D + G + A+ +
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRS-GLEELVNVATAILDAYCKCGDIRAARVVFDW 221
Query: 438 MPFPPDAIGWATLLSSCRIHGN 459
MP +++ W ++ +G+
Sbjct: 222 MP-TKNSVSWNAMIDGYAQNGD 242
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 262/659 (39%), Positives = 383/659 (58%), Gaps = 52/659 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D +WN ++SG + DAV + M+ +G+ +T S++L M CV L
Sbjct: 128 MPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAG-DAVTLSSVLPM-----CVVL 181
Query: 61 GRQ-----IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
G + +H + +K G +FV + L+D+Y KLG++
Sbjct: 182 GDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGML---------------------- 219
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
E+ +F GM +D ++W ++I+ Q G A++LF M G+ D
Sbjct: 220 ---------TEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVL 270
Query: 176 TFGSVLTA---CGGLLALEEGKQIHAFIIRND-HKDNVFVGSALVDMYCKCKSIKYAESV 231
T S+ +A CG L K +H ++ R ++ G+A+VDMY K I A+ V
Sbjct: 271 TLVSLASAVAQCGDELG---AKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKV 327
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN-GIEPDDFTLGSVISSCANLAS 290
F + ++VVSW ++ GY QNG + EA++I+ +M + G++P T SV+ + + L
Sbjct: 328 FDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGG 387
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
L++G + H S+ TGL + V+ L+ Y KCG + ++ LF M R W A+++G
Sbjct: 388 LQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAG 447
Query: 351 YAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP 410
G + + LF +M +KPD VT + +L+ACS AGLV++GR +F++M YGI P
Sbjct: 448 LGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVP 507
Query: 411 IHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL 470
I HYTCM+D+L RAG+L+EA FI MP PD+ W LL +CRIHGNVE+GK A+++L
Sbjct: 508 IAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNL 567
Query: 471 LELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSAD 530
ELDP N YVL+S++YA GKWD V +R +R + ++K PG S ++ K V +F +
Sbjct: 568 FELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSG 627
Query: 531 DWSSPYS--DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFG 588
+ P+ ++I L L KM GYVPD S VL DVE EK ++LN+HSE+LAIAFG
Sbjct: 628 TQTEPHPQHEEIQRGLHDLLAKMKSAGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFG 687
Query: 589 LLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
++ PPG P+ + KNLRVC DCH+ATKYISKIT+REI+VRDA RFH FK+G CSCGDFW
Sbjct: 688 IINTPPGTPLHIYKNLRVCGDCHSATKYISKITEREIIVRDANRFHHFKDGHCSCGDFW 746
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 179/359 (49%), Gaps = 4/359 (1%)
Query: 103 LPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLF 162
L N+ +++ LR G V E+ R+F M ++D +W M++GL +N +A+ L
Sbjct: 97 LLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLL 156
Query: 163 REMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC 222
M EG+A D T SVL C L +H + +++ +FV +AL+D+Y K
Sbjct: 157 GRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKL 216
Query: 223 KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
+ A VF MA +++V+W +++ Q G AV++F M +G+ PD TL S+
Sbjct: 217 GMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLA 276
Query: 283 SSCANLASLEEGTQFHGRSLVTGL-ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE 341
S+ A H G + I NA+V Y K I+ + ++F+ + RD
Sbjct: 277 SAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDV 336
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSH-GLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
VSW L++GY + G ANE I ++ M +H GLKP + T + VL A S G +++G
Sbjct: 337 VSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHA 396
Query: 401 IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+ +K G+ TC+ID+ ++ G+L EA MP W +++ +HG+
Sbjct: 397 LSIKT-GLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTG-PWNAIIAGLGVHGH 453
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 138/286 (48%), Gaps = 9/286 (3%)
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIR-NDHKDNVFVGSALVDMYCKCKSIKYA 228
L D FTF ++ A G Q+HA +R NVF +LV Y + + A
Sbjct: 65 LRPDSFTFPPLVRAAPGP---ASAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEA 121
Query: 229 ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL 288
VF M ++V +W AML G +N + +AV + M G+ D TL SV+ C L
Sbjct: 122 YRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVL 181
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
H ++ GL + V NAL+ YGK G + ++H +F M +RD V+W +++
Sbjct: 182 GDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSII 241
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
S + GK ++LF M+ G+ PD +TL+ + SA ++ G E G V+ G
Sbjct: 242 SANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCG-DELGAKSVHCYVRRRGW 300
Query: 409 RPIHDHYT--CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ D M+D+ ++ +++ A+ + +P D + W TL++
Sbjct: 301 D-VGDIIAGNAMVDMYAKMSKIDAAQKVFDNLP-DRDVVSWNTLIT 344
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 260/647 (40%), Positives = 377/647 (58%), Gaps = 33/647 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN +++G++ +G A+++ NLM ++ L S IT ++L S+ R + +
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKP-SFITIVSVLPAVSALRLIRI 254
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G++IHG+ ++ GF S V + + LVDMYAK G + A
Sbjct: 255 GKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTA------------------------ 290
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
R LF GM +++ +SW +MI +QN +EA+ +F++M EG+ +
Sbjct: 291 -------RLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGA 343
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L LE G+ IH + + NV V ++L+ MYCKCK + A S+F + + +
Sbjct: 344 LHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTI 403
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW AM++G+ QNG EA+ F MQ ++PD FT SVI++ A L+ HG
Sbjct: 404 VSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGV 463
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ L + V+ ALV Y KCG I + +F+ M+ R +W A++ GY G
Sbjct: 464 VMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAA 523
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++LFE+M ++P+ VT + V+SACS +GLVE G F +M + Y I P DHY M+D
Sbjct: 524 LELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVD 583
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAGRL EA FI +MP P + +L +C+IH NV + AE L EL+P +
Sbjct: 584 LLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGY 643
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
+VLL++IY + W+ V Q+R +M +G+RK PGCS ++ K+ VH F + + P S +I
Sbjct: 644 HVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKI 703
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
YA LEKL ++ + GYVPD + +L +E K ++L+ HSEKLAI+FGLL G I V
Sbjct: 704 YAFLEKLICQIKEAGYVPDTNLIL-GLEDDVKEQLLSSHSEKLAISFGLLNTTAGTTIHV 762
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC+DCHNATKYIS +T REI+VRD RFH FKNG CSCGD+W
Sbjct: 763 RKNLRVCADCHNATKYISLVTGREIIVRDMQRFHHFKNGACSCGDYW 809
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 133/485 (27%), Positives = 233/485 (48%), Gaps = 39/485 (8%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V + ++ G A ++ A+K + M D + + F+ +L + + +G++IHG
Sbjct: 101 VLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVV-YNFTYLLKVCGDEAELRVGKEIHG 159
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++K GF +F + L +MYAK +++A++ FD
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDR------------------------ 195
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
M ++D +SW T++ G QNG+ R A+++ M E L T SVL A
Sbjct: 196 -------MPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSA 248
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L + GK+IH + +R V + +ALVDMY KC S+K A +F M +NVVSW +M
Sbjct: 249 LRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSM 308
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ Y QN +EA+ IF M G++P D ++ + +CA+L LE G H S+ L
Sbjct: 309 IDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELEL 368
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
++V N+L++ Y KC ++ + +F ++ R VSW A++ G+A+ G+ E ++ F +
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQ 428
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M + +KPD T + V++A + + + ++++ + + T ++D+ ++ G
Sbjct: 429 MQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFV-TTALVDMYAKCG 487
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD--PYNPASYVLL 484
+ A+ + M W ++ HG IGK A E E+ P L
Sbjct: 488 AIMIARLIFDMMS-ERHVTTWNAMIDGYGTHG---IGKAALELFEEMQKGTIRPNGVTFL 543
Query: 485 SSIYA 489
S I A
Sbjct: 544 SVISA 548
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 163/296 (55%), Gaps = 1/296 (0%)
Query: 110 MYNTMITGLL-RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE 168
++ T + L R G V+E+ R+F + K ++ + TM+ G + +A+ F MR +
Sbjct: 70 LFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDD 129
Query: 169 GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYA 228
+ + F +L CG L GK+IH ++++ ++F + L +MY KC+ + A
Sbjct: 130 EVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEA 189
Query: 229 ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL 288
VF M +++VSW ++ GY QNG + A+++ M ++P T+ SV+ + + L
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSAL 249
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
+ G + HG ++ G S + ++ ALV Y KCG+++ + LF+ M R+ VSW +++
Sbjct: 250 RLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMI 309
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
Y + E + +F+KML G+KP +V+++G L AC+ G +E+GR ++ V+
Sbjct: 310 DAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE 365
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 128/269 (47%), Gaps = 10/269 (3%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
+L+E + I I +N + LV ++C+ S+ A VF + K V + ML
Sbjct: 49 SLKELRHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLK 108
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
G+ + ++A+K F M+ + +EP + ++ C + A L G + HG + +G
Sbjct: 109 GFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSL 168
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
+ L Y KC + ++ ++F+ M RD VSW +V+GY++ G A +++ M
Sbjct: 169 DLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMC 228
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY----TCMIDILSR 424
LKP +T++ VL A S L+ G+ + Y +R D T ++D+ ++
Sbjct: 229 EENLKPSFITIVSVLPAVSALRLIRIGKE-----IHGYAMRAGFDSLVNIATALVDMYAK 283
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSS 453
G L+ A+ + M + + W +++ +
Sbjct: 284 CGSLKTARLLFDGM-LERNVVSWNSMIDA 311
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 249/603 (41%), Positives = 362/603 (60%), Gaps = 32/603 (5%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
++++L R+ ++ G+Q+H I + G + + LV++Y + +A FD +
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
++N+ + W MI G NG AI L+ +
Sbjct: 64 KRNLFL-------------------------------WNVMIRGYAWNGPYELAISLYYQ 92
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
MR GL D+FTF VL AC L A+EEGK+IH +IR+ + +VFVG+AL+DMY KC
Sbjct: 93 MRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGC 152
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
++ A VF + ++VV W +ML Y QNG +E++ + M NG++P + T I++
Sbjct: 153 VESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAA 212
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
A+ L +G + HG S G S V AL+ Y K G++ + LF + + VSW
Sbjct: 213 SADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSW 272
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
A+++GYA G ANE +DLF++M L PD +T +GVL+ACS GL+ +G+ +F M+
Sbjct: 273 NAMITGYAMHGHANEALDLFKEMKGKVL-PDHITFVGVLAACSHGGLLNEGKMHFRSMIS 331
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
++ I P HYTCMID+L GRLEEA I +M PDA W LL SC+IHGNVE+G+
Sbjct: 332 DFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGE 391
Query: 465 WAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRV 524
A E L+EL+P + +YV+LS++YA GKWD V++LR M KG++K CSWI+ ++V
Sbjct: 392 LALEKLVELEPDDGGNYVILSNMYAQAGKWDGVARLRDLMMNKGLKKSIACSWIEVGNKV 451
Query: 525 HIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLA 584
H F ++D S P S+ IYAEL++ + M + GY P + SV HDVE EK+ M++ HSE+LA
Sbjct: 452 HAFLSEDTSHPKSEAIYAELKRTGKLMKEAGYAPQVGSVFHDVEDDEKVDMVSCHSERLA 511
Query: 585 IAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCG 644
IAFGL+ G + ++KNLR+C DCH A K+ISKIT+REI +RD R+H FK+G CSCG
Sbjct: 512 IAFGLISTSAGTKLLIIKNLRICEDCHVAIKFISKITEREITIRDVNRYHHFKDGVCSCG 571
Query: 645 DFW 647
DFW
Sbjct: 572 DFW 574
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 186/371 (50%), Gaps = 39/371 (10%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN++I G+A +G A+ +Y M GL + TF +L S+ ++ G++IH +
Sbjct: 70 WNVMIRGYAWNGPYELAISLYYQMRDYGLVP-DKFTFPFVLKACSALSAMEEGKKIHKDV 128
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
++ G S VFVG+ L+DMYAK G + A++ FD++ E+++V +N+
Sbjct: 129 IRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNS--------------- 173
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
M+ QNG E++ L R M GL + TF + A
Sbjct: 174 ----------------MLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNG 217
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
L +GK++H + R+ + N V +AL+DMY K S+ A S+F + K VVSW AM+
Sbjct: 218 LLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMIT 277
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
GY +G + EA+ +F M + + PD T V+++C++ L EG + H RS+++
Sbjct: 278 GYAMHGHANEALDLFKEM-KGKVLPDHITFVGVLAACSHGGLLNEG-KMHFRSMISDFNI 335
Query: 309 FITVSN--ALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKANETIDLFE 365
+ TV + ++ G CG +E++++L EM V D W AL+ G E
Sbjct: 336 WPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALE 395
Query: 366 KMLSHGLKPDE 376
K++ L+PD+
Sbjct: 396 KLVE--LEPDD 404
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 86/164 (52%), Gaps = 4/164 (2%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V WN +++ ++ +G ++++ + +M +GL + TF + S+ + G+++
Sbjct: 167 DVVCWNSMLATYSQNGQPDESLALCRVMAFNGL-KPTEGTFVISIAASADNGLLPQGKEL 225
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG+ + GF S V + L+DMYAK G + A+ F+ L EK +V +N MITG G
Sbjct: 226 HGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHA 285
Query: 125 EESRRLFRGMKDK---DSISWTTMITGLMQNGLEREAIDLFREM 165
E+ LF+ MK K D I++ ++ GL E FR M
Sbjct: 286 NEALDLFKEMKGKVLPDHITFVGVLAACSHGGLLNEGKMHFRSM 329
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 235/553 (42%), Positives = 355/553 (64%), Gaps = 15/553 (2%)
Query: 96 AKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLE 155
A+ FD++PE+++ +N M+TG +R ++ +R LF M ++D +SW M++G QNG
Sbjct: 14 ARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFV 73
Query: 156 REAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSAL 215
EA ++F +M L+ + ++ +L A +E+ K++ F + D L
Sbjct: 74 DEAREIFYKMPLK----NGISWNGLLAAYVQNGRIEDAKRL--FESKMDW--------TL 119
Query: 216 VDMYCKCKS-IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD 274
V C ++ ++F M ++ +SW+AM+ GY QNGCSEEA+ F MQR+ +
Sbjct: 120 VSWNCLMGGFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLN 179
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN 334
+ +S+C+N+A+LE G Q H R + G + V NAL+ Y KCG+I+++ F
Sbjct: 180 RSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQ 239
Query: 335 EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEK 394
E+ +D VSW ++ GYA+ G E + +FE M + G++PD+ T++ VL+ACS AGLV++
Sbjct: 240 EILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQ 299
Query: 395 GRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
G YF M ++YGI HYTCM+D+L RAG+LEEA++ + MPF PDA W LL +
Sbjct: 300 GSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGAS 359
Query: 455 RIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPG 514
RIHGN E+G+ AA+ + E++P+N Y+LLS +YA+ G+W ++R MR KGV+K PG
Sbjct: 360 RIHGNTELGEKAAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVKKVPG 419
Query: 515 CSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIK 574
SW++ ++++H F D S P++D+IY LE+++ K+ +EGY+ + V HDVE EK+
Sbjct: 420 YSWLEVQNKIHTFKVGDTSHPHTDKIYTFLEEMDLKLKQEGYISSTNLVFHDVEEEEKVH 479
Query: 575 MLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFH 634
ML +HSEKLA+A+G+L+IP G PIRV+KNLRVC DCHNA KYISKI R I++RD RFH
Sbjct: 480 MLKYHSEKLAVAYGILYIPAGRPIRVIKNLRVCEDCHNAIKYISKIVGRLIILRDNHRFH 539
Query: 635 LFKNGECSCGDFW 647
F+ G CSC DFW
Sbjct: 540 YFEGGSCSCRDFW 552
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 161/296 (54%), Gaps = 28/296 (9%)
Query: 81 SPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFR-------- 132
+ ++ YA+ G + +A+ F ++P KN + +N ++ ++ G +E+++RLF
Sbjct: 61 NAMLSGYAQNGFVDEAREIFYKMPLKNGISWNGLLAAYVQNGRIEDAKRLFESKMDWTLV 120
Query: 133 ------------------GMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
M +DSISW+ MI G QNG EA+ F EM+ + +++
Sbjct: 121 SWNCLMGGFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNR 180
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
+F L+ C + ALE G+Q+H +++ ++ +VG+AL+ MYCKC SI A F+
Sbjct: 181 SSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQE 240
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
+ K+VVSW M+ GY ++G EEA+ +F M+ GI PDD T+ SV+++C++ +++G
Sbjct: 241 ILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQG 300
Query: 295 TQ-FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALV 348
++ F+ + G+ + + +V G+ G +E++ L M D +W AL+
Sbjct: 301 SEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALL 356
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 132/272 (48%), Gaps = 37/272 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D +SW+ +I+G++ +G +A+ + M +D L+R +F+ L S+ ++L
Sbjct: 140 MPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRD-CERLNRSSFTCALSTCSNIAALEL 198
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H ++K G+ + +VG+ L+ MY K G I +A+ F E+ EK++V +NTMI G R
Sbjct: 199 GRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYAR 258
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G E EA+ +F M+ G+ D T SV
Sbjct: 259 HGFGE-------------------------------EALTVFELMKTTGIRPDDATMVSV 287
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVG-SALVDMYCKCKSIKYAESVFRTMAWK- 238
L AC +++G + + R+ V + +VD+ + ++ A+++ + M ++
Sbjct: 288 LAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEP 347
Query: 239 NVVSWTAMLVG---YGQNGCSEEAVKIFCNMQ 267
+ +W A+L +G E+A +I M+
Sbjct: 348 DAATWGALLGASRIHGNTELGEKAAQIIFEME 379
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 261/649 (40%), Positives = 382/649 (58%), Gaps = 35/649 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MPF D SWN +ISG +G+ A+ V + M +G+ N+ +T +++L + + +
Sbjct: 233 MPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGI-NMDSVTVASILPVCAQLGDIST 291
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
IH +++K G +FV + L++MYAK G + DA++
Sbjct: 292 ATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQK---------------------- 329
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+F+ M +D +SW ++I QN A F +M+L GL D T S+
Sbjct: 330 ---------VFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSL 380
Query: 181 LTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+ + + +H FI+R + V +G+A++DMY K I A VF + K+
Sbjct: 381 ASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKD 440
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQR-NGIEPDDFTLGSVISSCANLASLEEGTQFH 298
VVSW ++ GY QNG + EA++++ M+ I+ + T S++++ A++ +L++G + H
Sbjct: 441 VVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIH 500
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G + T L + V L+ YGKCG + D+ LF ++ V W A++S + G
Sbjct: 501 GHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGE 560
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
+ + LF +M G+KPD VT I +LSACS +GLV++G+ +F +M +EYGI+P HY CM
Sbjct: 561 KALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLM-QEYGIKPSLKHYGCM 619
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
+D+L RAG LE A FI MP PDA W LL +CRIHGN+E+GK+A++ L E+D N
Sbjct: 620 VDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENV 679
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
YVLLS+IYA+ GKW+ V ++R RE+G++K PG S I+ RV IF + S P
Sbjct: 680 GYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCK 739
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
+IYAEL L KM GY+PD S VL DVE EK +L HSE+LAIAFG++ PP I
Sbjct: 740 EIYAELRILTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSAI 799
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R+ KNLRVC DCHNATK+IS+IT+REI+VRD+ RFH FKNG CSCGD+W
Sbjct: 800 RIFKNLRVCGDCHNATKFISRITEREIVVRDSKRFHHFKNGICSCGDYW 848
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 157/520 (30%), Positives = 258/520 (49%), Gaps = 48/520 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +WN +IS + +G +A+ + +L TF +L + + VD GR+I
Sbjct: 138 DVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVL--KACQTLVD-GRKI 194
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H + K GF VFV + L+ MY++ G + A+ FD++P
Sbjct: 195 HCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMP-------------------- 234
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
FR M SW MI+GL+QNG +A+D+ EMRLEG+ MD T S+L C
Sbjct: 235 ------FRDMG-----SWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVC 283
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L + IH ++I++ + +FV +AL++MY K ++ A+ VF+ M ++VVSW
Sbjct: 284 AQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWN 343
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
+++ Y QN A F MQ NG+EPD TL S+ S A + HG +
Sbjct: 344 SIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRR 403
Query: 305 G-LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
G L+ + + NA++ Y K G I+ +H++FN + V+D VSW L+SGY + G A+E I++
Sbjct: 404 GWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEV 463
Query: 364 FEKMLS-HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH-DHY--TCMI 419
+ M +K ++ T + +L+A + G +++G ++K +H D + TC+I
Sbjct: 464 YRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKT----NLHLDVFVGTCLI 519
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG-KWAAESLLELDPYNP 478
D+ + GRL +A ++P ++ W ++S IHG+ E K E E +
Sbjct: 520 DLYGKCGRLVDAMCLFYQVP-RESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDH 578
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVR---KDPGC 515
+++ L S + G D M+E G++ K GC
Sbjct: 579 VTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLKHYGC 618
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 202/392 (51%), Gaps = 17/392 (4%)
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL-EGLAMDQFTFGSV 180
G V SR F ++ KD +W +MI+ ++NG REAID F ++ L D +TF V
Sbjct: 122 GDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPV 181
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L+ +G++IH ++ + + +VFV ++L+ MY + + A S+F M ++++
Sbjct: 182 LKACQTLV---DGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDM 238
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
SW AM+ G QNG + +A+ + M+ GI D T+ S++ CA L + T H
Sbjct: 239 GSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLY 298
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ GL + VSNAL+ Y K GN+ D+ ++F +M +RD VSW ++++ Y +
Sbjct: 299 VIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTA 358
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
F KM +GL+PD +TL+ + S +++ + R +++ + ++D
Sbjct: 359 RGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMD 418
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG----NVEIGKWAAESLLELDPY 476
+ ++ G ++ A N +P D + W TL+S +G +E+ + E E+
Sbjct: 419 MYAKLGVIDSAHKVFNLIPV-KDVVSWNTLISGYTQNGLASEAIEVYR-MMEECREI-KL 475
Query: 477 NPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
N ++V + + YA HV L++ MR G
Sbjct: 476 NQGTWVSILAAYA------HVGALQQGMRIHG 501
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 135/282 (47%), Gaps = 9/282 (3%)
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
++ F S+ +C L K++HA ++ + + F+ LV++Y + + F
Sbjct: 75 EEIDFNSLFDSCTKTLL---AKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTF 131
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR-NGIEPDDFTLGSVISSCANLASL 291
+ K+V +W +M+ Y +NG EA+ F + + D +T V+ +C L
Sbjct: 132 DQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLV-- 189
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
+G + H G + V+ +L+ Y + G + + LF++M RD SW A++SG
Sbjct: 190 -DGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGL 248
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
+ G A + +D+ ++M G+ D VT+ +L C++ G + + V ++G+
Sbjct: 249 IQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTAT-LIHLYVIKHGLEFE 307
Query: 412 HDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+I++ ++ G L +A+ +M F D + W +++++
Sbjct: 308 LFVSNALINMYAKFGNLGDAQKVFQQM-FLRDVVSWNSIIAA 348
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 15/208 (7%)
Query: 268 RNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIE 327
R + ++ S+ SC + H +V+G I +S LV Y G++
Sbjct: 69 RQPAKNEEIDFNSLFDSCTKTLL---AKRLHALLVVSGKIQSNFISIRLVNLYASLGDVS 125
Query: 328 DSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF-EKMLSHGLKPDEVTLIGVLSAC 386
S F+++ +D +W +++S Y + G E ID F + +L + D T VL AC
Sbjct: 126 LSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKAC 185
Query: 387 SRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIG 446
LV+ GR V + G + +I + SR G + A+S + MPF D
Sbjct: 186 QT--LVD-GRK-IHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPF-RDMGS 240
Query: 447 WATLLSSCRIHGNVEIGKWAAESLLELD 474
W ++S +GN AA++L LD
Sbjct: 241 WNAMISGLIQNGN------AAQALDVLD 262
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 258/643 (40%), Positives = 374/643 (58%), Gaps = 31/643 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +SWN +ISG G +V ++ +L+D L S + SS L QI
Sbjct: 1000 DLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQI 1059
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +K G FV + L+D+Y+K RG +
Sbjct: 1060 HACAMKAGVVLDSFVSTALIDVYSK-------------------------------RGKM 1088
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
EE+ LF D SW ++ G + +G +A+ L+ M+ G DQ T + A
Sbjct: 1089 EEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAA 1148
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
GGL+ L++GKQIHA +++ ++FV S ++DMY KC ++ A VF + + V+WT
Sbjct: 1149 GGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWT 1208
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
M+ G +NG E A+ + M+ + ++PD++T +++ +C+ L +LE+G Q H +
Sbjct: 1209 TMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKL 1268
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
V +LV Y KCGNIED+ LF N R SW A++ G A+ G A E + F
Sbjct: 1269 NCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFF 1328
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+ M S G+ PD VT IGVLSACS +GLV + F M K YGI P +HY+C++D LSR
Sbjct: 1329 KYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSR 1388
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AGR+EEA+ I+ MPF A + TLL++CR+ + E GK AE LL L+P + A+YVLL
Sbjct: 1389 AGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLL 1448
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S++YA+ +W++V+ R MR+ V+KDPG SW+ K++VH+F A D S +D IY ++
Sbjct: 1449 SNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKV 1508
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
E + +++ +EGYVPD L DVE +K L +HSEKLAIA+GL+ PP +RV+KNL
Sbjct: 1509 EYIMKRIREEGYVPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNL 1568
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RVC DCH+A KYISK+ +REI++RDA RFH F+NG CSCGD+W
Sbjct: 1569 RVCGDCHSAIKYISKVFKREIVLRDANRFHHFRNGICSCGDYW 1611
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 149/533 (27%), Positives = 250/533 (46%), Gaps = 55/533 (10%)
Query: 5 DGVSWNLLISGHASHGS-VNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQ 63
D V+WN ++S A+H +D ++ L L+ + + +R T + + M
Sbjct: 723 DLVTWNAILSALAAHADKSHDGFHLFRL-LRRSVVSTTRHTLAPVFKMCLLSASPSASES 781
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
+HG+ +K G VFV LV++YAK GLI +A+ FD + +++V++N M+ + L
Sbjct: 782 LHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCL 841
Query: 124 VEESRRLF-------------------RGMKDK------------------------DSI 140
E+ LF R +K K D I
Sbjct: 842 EYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLFMYDDDGSDVI 901
Query: 141 SWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFI 200
W ++ +Q G EA+D F +M +A D TF +LT GL LE GKQIH +
Sbjct: 902 VWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIV 961
Query: 201 IRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAV 260
+R+ V VG+ L++MY K S+ A SVF M +++SW M+ G +G E +V
Sbjct: 962 MRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSV 1021
Query: 261 KIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG----TQFHGRSLVTGLISFITVSNAL 316
+F ++ R+ + PD FT+ SV+ +C +SLE G TQ H ++ G++ VS AL
Sbjct: 1022 GMFVHLLRDSLLPDQFTVASVLRAC---SSLEGGYYLATQIHACAMKAGVVLDSFVSTAL 1078
Query: 317 VTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDE 376
+ Y K G +E++ LF + D SW A++ GY G + + L+ M G + D+
Sbjct: 1079 IDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQ 1138
Query: 377 VTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFIN 436
+TL+ A +++G+ ++VK G + ++D+ + G +E A+ +
Sbjct: 1139 ITLVNAAKAAGGLVGLKQGKQIHAVVVKR-GFNLDLFVTSGVLDMYLKCGEMESARRVFS 1197
Query: 437 KMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYA 489
++P PD + W T++S C +G E + + L P Y + + A
Sbjct: 1198 EIP-SPDDVAWTTMISGCVENGQEEHALFTYHQ-MRLSKVQPDEYTFATLVKA 1248
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 225/463 (48%), Gaps = 45/463 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D + WN +S G +AV + M+ + +TF ML + + C++LG+QI
Sbjct: 899 DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVA-CDGLTFVVMLTVVAGLNCLELGKQI 957
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG +++ G V VG+ L++MY K G + A+ F ++ E +++ +NTM
Sbjct: 958 HGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTM---------- 1007
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
I+G +GLE ++ +F + + L DQFT SVL AC
Sbjct: 1008 ---------------------ISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRAC 1046
Query: 185 GGLLALEEG----KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+LE G QIHA ++ + FV +AL+D+Y K ++ AE +F ++
Sbjct: 1047 S---SLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDL 1103
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
SW A++ GY +G +A++++ MQ +G D TL + + L L++G Q H
Sbjct: 1104 ASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAV 1163
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ G + V++ ++ Y KCG +E + R+F+E+ D+V+WT ++SG + G+
Sbjct: 1164 VVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHA 1223
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--TCM 418
+ + +M ++PDE T ++ ACS +E+GR +VK + D + T +
Sbjct: 1224 LFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVK---LNCAFDPFVMTSL 1280
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+D+ ++ G +E+A+ + A W ++ HGN +
Sbjct: 1281 VDMYAKCGNIEDARGLFKRTNTRRIA-SWNAMIVGLAQHGNAK 1322
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 171/402 (42%), Gaps = 59/402 (14%)
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
+ LG++ H IL G FV + L+ MYAK G + A++ FD P+ N
Sbjct: 672 LSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTN---------- 721
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNG-LEREAIDLFREMRLEGLAMDQFT 176
+D ++W +++ L + + LFR +R ++ + T
Sbjct: 722 -------------------RDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHT 762
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
V C + + +H + ++ + +VFV ALV++Y K I+ A +F MA
Sbjct: 763 LAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMA 822
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
++VV W M+ Y EA+ +F R G PDD TL ++ ++ E Q
Sbjct: 823 VRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQ 882
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
F ++ T L Y G+ D + W +S + + G+
Sbjct: 883 F--KAYATKLF-----------MYDDDGS--------------DVIVWNKALSRFLQRGE 915
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
A E +D F M++ + D +T + +L+ + +E G+ I+++ G+ +
Sbjct: 916 AWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRS-GLDQVVSVGN 974
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
C+I++ +AG + A+S +M D I W T++S C + G
Sbjct: 975 CLINMYVKAGSVSRARSVFGQMN-EVDLISWNTMISGCTLSG 1015
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 90/175 (51%), Gaps = 15/175 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRI-----TFSTMLIMSSSR 55
+P D V+W +ISG +G A+ Y+ M LS++ TF+T++ S
Sbjct: 1199 IPSPDDVAWTTMISGCVENGQEEHALFTYHQM------RLSKVQPDEYTFATLVKACSLL 1252
Query: 56 RCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
++ GRQIH +I+K FV + LVDMYAK G I DA+ F + I +N MI
Sbjct: 1253 TALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMI 1312
Query: 116 TGLLRRGLVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMR 166
GL + G +E+ + F+ MK + D +++ +++ +GL EA + F M+
Sbjct: 1313 VGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQ 1367
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 80/179 (44%), Gaps = 9/179 (5%)
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM--N 337
S++ + L G + H R L +G V+N L+T Y KCG++ + +LF+
Sbjct: 661 SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDT 720
Query: 338 VRDEVSWTALVSGYAKFG-KANETIDLFEKMLSHGLKPDEVTLIGVLSAC--SRAGLVEK 394
RD V+W A++S A K+++ LF + + TL V C S + +
Sbjct: 721 NRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASE 780
Query: 395 GRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
H + + + G++ +++I ++ G + EA+ + M D + W ++ +
Sbjct: 781 SLHGYAVKI---GLQWDVFVAGALVNIYAKFGLIREARVLFDGMAV-RDVVLWNVMMKA 835
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 256/680 (37%), Positives = 390/680 (57%), Gaps = 70/680 (10%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D SWN +I H+ G + A++++ M D N + T+ ++ S+ + GR+I
Sbjct: 172 DETSWNAVILAHSQSGDWSGALRIFKEMKCDVKPNST--TYINVISGFSTPEVLPEGRKI 229
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H I+ GF + + V + L++MY K G ++A+ FD+
Sbjct: 230 HAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDK---------------------- 267
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
MK +D +SW MI + NG EA++L++++ +EG + TF S+L AC
Sbjct: 268 ---------MKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGAC 318
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM------AW- 237
+ AL +G+ +H+ I+ V V +ALV+MY KC S++ A VF M AW
Sbjct: 319 SSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWS 378
Query: 238 ---------------------------KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQ-RN 269
++ +SW AM+ Y QNGC+ A+KIF M
Sbjct: 379 TLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAA 438
Query: 270 GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
G++PD T +V+ +CA+L L E H + + L S + V+N L+ Y +CG++E++
Sbjct: 439 GLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEA 498
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
RLF + VSWTA+V+ ++++G+ E +DLF++M G+KPD+VT +L C+
Sbjct: 499 ERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHG 558
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
G +E+G YF M + + + P DH+ M+D+L R+GRL +AK + MPF PD + W T
Sbjct: 559 GSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMT 618
Query: 450 LLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
L++CRIHG +E+G+ AAE + ELDP + A Y+ +S+IYA+ G W+ V+ +R+ M E+G+
Sbjct: 619 FLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGL 678
Query: 510 RKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVEL 569
+K PG S+I+ ++H FS+ P +D+I EL +L+ M GYVPD +VLHDV
Sbjct: 679 KKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSE 738
Query: 570 SEKIKMLNHHSEKLAIAFGLLFIP-PGLPIRVVKNLRVCSDCHNATKYISKITQREILVR 628
EK ML +HSEK+AIAFGL+ G PIRVVKNLRVCSDCH ATK+I++I R+I+VR
Sbjct: 739 GEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDIIVR 798
Query: 629 DAVRFHLF-KNGECSCGDFW 647
D RFH F +G+CSCGD+W
Sbjct: 799 DCNRFHRFSSDGKCSCGDYW 818
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 217/450 (48%), Gaps = 35/450 (7%)
Query: 43 ITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDE 102
+TF T+L SS V GR +H I F VG+ L+ MY K + DA+ F+
Sbjct: 8 VTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFES 67
Query: 103 LPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLF 162
+ + ++ +SW MI QNG EA+ L+
Sbjct: 68 MD-----------------------------WRQRNVVSWNAMIAAYAQNGHSTEALVLY 98
Query: 163 REMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC 222
M L+GL D TF SVL AC +L +G++IH + + + +ALV MY +
Sbjct: 99 WRMNLQGLGTDHVTFVSVLGACS---SLAQGREIHNRVFYSGLDSFQSLANALVTMYARF 155
Query: 223 KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
S+ A+ +F+++ ++ SW A+++ + Q+G A++IF M+ + ++P+ T +VI
Sbjct: 156 GSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCD-VKPNSTTYINVI 214
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
S + L EG + H + G + + V+ AL+ YGKCG+ ++ +F++M RD V
Sbjct: 215 SGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMV 274
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
SW ++ Y G +E ++L++K+ G K + T + +L ACS + +GR
Sbjct: 275 SWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGR-LVHSH 333
Query: 403 VKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
+ E G+ T ++++ ++ G LEEA+ N M DA+ W+TL+ + +G +
Sbjct: 334 ILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMK-NRDAVAWSTLIGAYASNGYGKD 392
Query: 463 GKWAAESLLELDPYNPASYVLLSSIYASKG 492
+ A + L + S+ + + Y G
Sbjct: 393 ARKARKVFDRLGSRDTISWNAMITTYVQNG 422
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 161/290 (55%), Gaps = 10/290 (3%)
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
D TF +VL +C + EG+ +H I + + + VG+AL+ MY KC S+ A SVF
Sbjct: 6 DNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65
Query: 233 RTMAWK--NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS 290
+M W+ NVVSW AM+ Y QNG S EA+ ++ M G+ D T SV+ +C++LA
Sbjct: 66 ESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA- 124
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
+G + H R +GL SF +++NALVT Y + G++ D+ R+F + RDE SW A++
Sbjct: 125 --QGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILA 182
Query: 351 YAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH-YFEIMVKEYGIR 409
+++ G + + +F++M +KP+ T I V+S S ++ +GR + EI+ +
Sbjct: 183 HSQSGDWSGALRIFKEMKCD-VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTD 241
Query: 410 PIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+ T +I++ + G EA+ +KM D + W ++ ++G+
Sbjct: 242 LV--VATALINMYGKCGSSHEAREVFDKMK-KRDMVSWNVMIGCYVLNGD 288
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 123/262 (46%), Gaps = 21/262 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D V+W+ LI +AS+G DA K + D LG+ I+++ M+ C
Sbjct: 369 MKNRDAVAWSTLIGAYASNGYGKDARKARKVF--DRLGSRDTISWNAMITTYVQNGCAVA 426
Query: 61 GRQIHGHIL-KFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP----EKNIVMYNTMI 115
+I + G +++ A LG + + K ++ E N+V+ NT+I
Sbjct: 427 AMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLI 486
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
R G +EE+ RLF K+K +SWT M+ Q G EA+DLF+EM LEG+ D
Sbjct: 487 NMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDV 546
Query: 176 TFGSVLTACGGLLALEEG-------KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYA 228
T+ S+L C +LE+G ++HA DH +A+VD+ + + A
Sbjct: 547 TYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHF------AAMVDLLGRSGRLFDA 600
Query: 229 ESVFRTMAWK-NVVSWTAMLVG 249
+ + +M ++ + V+W L
Sbjct: 601 KELLESMPFEPDPVAWMTFLTA 622
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 11/184 (5%)
Query: 272 EPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHR 331
+PD+ T +V+ SC++ + EG H R + V NAL++ YGKC ++ D+
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 332 LFNEMN--VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
+F M+ R+ VSW A+++ YA+ G + E + L+ +M GL D VT + VL ACS
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS- 122
Query: 390 GLVEKGRHYFEIMVKEY--GIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGW 447
+ +GR EI + + G+ ++ + +R G + +AK + D W
Sbjct: 123 --LAQGR---EIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQ-TRDETSW 176
Query: 448 ATLL 451
++
Sbjct: 177 NAVI 180
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 253/648 (39%), Positives = 380/648 (58%), Gaps = 33/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +SWN +I+G+ S+G + V+ ML G+ + T ++ + R + L
Sbjct: 256 MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGI-EIDLATIVSVFAGCADSRLISL 314
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +H +K F + L+DMY+K G + AK
Sbjct: 315 GRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKV---------------------- 352
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+FR M + +S+T+MI G + GL EA+ LF EM EG++ D +T +V
Sbjct: 353 ---------VFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAV 403
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C L+EGK++H +I ND ++FV +AL+DMY KC S++ AE VF M K++
Sbjct: 404 LNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDI 463
Query: 241 VSWTAMLVGYGQNGCSEEAVKIF-CNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+SW ++ GY +N + EA+ +F + PD+ T+ V+ +CA+L++ ++G + HG
Sbjct: 464 ISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHG 523
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ G S V+N+LV Y KCG + + LF+++ +D VSWT +++GY G E
Sbjct: 524 YIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKE 583
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
I LF +M G++PDE++ + +L ACS +GLV++G +F IM E I P +HY C++
Sbjct: 584 AIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIV 643
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L+R G L +A FI MP PPDA W LL CRIH +V++ + AE + EL+P N
Sbjct: 644 DMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTG 703
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
YVL+++IYA KW+ V +LR+ + ++G+RK+PGCSWI+ K RV+IF A D S+P +++
Sbjct: 704 YYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEK 763
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
I A L + +MI+EGY P L D E EK + L HSEKLA+A G++ G IR
Sbjct: 764 IEAFLRGVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIR 823
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V KNLRVC DCH K++SK+T+REI++RD+ RFH FK+G CSC FW
Sbjct: 824 VTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 135/451 (29%), Positives = 230/451 (50%), Gaps = 35/451 (7%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN+L++ A G + ++ ++ M+ G+ + TFS + SS R V+ G Q+HG+I
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGV-EMDSYTFSCVSKSFSSLRSVNGGEQLHGYI 221
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
LK GFG VG+ LV Y K + A++ FDE+ E++++ +N++I G +
Sbjct: 222 LKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYV--------- 272
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
NGL + + +F +M G+ +D T SV C
Sbjct: 273 ----------------------SNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSR 310
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
+ G+ +H F ++ + L+DMY KC + A+ VFR M+ ++VVS+T+M+
Sbjct: 311 LISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIA 370
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
GY + G + EAVK+F M+ GI PD +T+ +V++ CA L+EG + H +
Sbjct: 371 GYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGF 430
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
I VSNAL+ Y KCG++ ++ +F+EM V+D +SW ++ GY+K ANE + LF +L
Sbjct: 431 DIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLL 490
Query: 369 -SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
PDE T+ VL AC+ +KGR +++ H + ++D+ ++ G
Sbjct: 491 VEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS-LVDMYAKCGA 549
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
L A+ + + D + W +++ +HG
Sbjct: 550 LLLARLLFDDIT-SKDLVSWTVMIAGYGMHG 579
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 215/432 (49%), Gaps = 36/432 (8%)
Query: 20 GSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFV 79
G++ +AVK+ ++ G ++ T ++L + + + + G+++ I GF +
Sbjct: 75 GNLKNAVKLLHV---SGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNL 131
Query: 80 GSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDS 139
GS L MY G + +A R FD++ K + +
Sbjct: 132 GSKLALMYTNCGDLKEASRVFDQV-------------------------------KIEKA 160
Query: 140 ISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAF 199
+ W ++ L ++G +I LF++M G+ MD +TF V + L ++ G+Q+H +
Sbjct: 161 LFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGY 220
Query: 200 IIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEA 259
I+++ + VG++LV Y K + A VF M ++V+SW +++ GY NG +E+
Sbjct: 221 ILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG 280
Query: 260 VKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTF 319
+ +F M +GIE D T+ SV + CA+ + G H + N L+
Sbjct: 281 LSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDM 340
Query: 320 YGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTL 379
Y KCG+++ + +F EM+ R VS+T++++GYA+ G A E + LFE+M G+ PD T+
Sbjct: 341 YSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 400
Query: 380 IGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP 439
VL+ C+R L+++G+ E +KE + ++D+ ++ G + EA+ ++M
Sbjct: 401 TAVLNCCARNRLLDEGKRVHE-WIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMR 459
Query: 440 FPPDAIGWATLL 451
D I W T++
Sbjct: 460 V-KDIISWNTVI 470
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 252/650 (38%), Positives = 377/650 (58%), Gaps = 64/650 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLK--DGLGNLSRITFSTMLIMSSSRRCVDLGR 62
+ V+WN +IS A G NDA+ ++ M + DG+ + TF+T+L + +++R + GR
Sbjct: 240 NQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGI-QPDQFTFTTLLTLCANQRNDNQGR 298
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
QIH H+++ + V + LV MY++ G + AK F+ + E+N
Sbjct: 299 QIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERN--------------- 343
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
+ SW +MI G QNG +EA+ LF++M+L G+ D F+ S+L+
Sbjct: 344 ----------------AYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLS 387
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK--NV 240
+C L ++G+++H FI+RN ++ + LVDMY KC S+ YA V+ K N
Sbjct: 388 SCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNT 447
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
W ++L GY G +E+ F M + IE D T+ +++ NL LE
Sbjct: 448 ALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIV----NLLVLE-------- 495
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
ALV Y KCG I + +F+ MN ++ VSW A++SGY+K G + E
Sbjct: 496 -------------TALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEA 542
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ L+E+M G+ P+EVT + +LSACS GLVE+G F M ++Y I +HYTCM+D
Sbjct: 543 LILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVD 602
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAGRLE+AK F+ KMP P+ W LL +CR+H ++++G+ AA+ L ELDP NP
Sbjct: 603 LLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGP 662
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YV++S+IYA+ G+W V +R+ M+ KGV+KDPG SWI+ S + IF A + P +++I
Sbjct: 663 YVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEI 722
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLH---DVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
Y L L + GY+PD S +L D++ E+ + L HSE+LA++ GL+ +P
Sbjct: 723 YNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLISLPKKST 782
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
IRV KNLR+C DCH ATK+ISKIT R I+ RD RFH F+NG+CSCGD+W
Sbjct: 783 IRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 832
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 187/377 (49%), Gaps = 39/377 (10%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ IH ++ G+ ++ + ++ +YA+ G + D + Y
Sbjct: 90 GKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDD-------------LCY--------- 127
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+R+LF M +++ +W TMI + EA +F M G+ D FTF S
Sbjct: 128 ------ARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASA 181
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L CG L + + GKQ+H+ +I K + FVG+AL+DMY KC + VF M +N
Sbjct: 182 LRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQ 241
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQ--RNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
V+W +++ Q G +A+ +F MQ +GI+PD FT ++++ CAN + +G Q H
Sbjct: 242 VTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIH 301
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
+ + I V LV Y +CG + + +FN M R+ SW +++ GY + G+
Sbjct: 302 AHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQ 361
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK----EYGIRPIHDH 414
E + LF++M +G+KPD +L +LS+C +KGR +V+ E GI +
Sbjct: 362 EALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQV--- 418
Query: 415 YTCMIDILSRAGRLEEA 431
++D+ ++ G ++ A
Sbjct: 419 --VLVDMYAKCGSMDYA 433
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 172/355 (48%), Gaps = 25/355 (7%)
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIK---YA 228
++ + S++ C + + GK IH +I N + + ++ + ++ +Y + + YA
Sbjct: 69 VNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYA 128
Query: 229 ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL 288
+F M +N+ +W M++ Y + EA IF M + G+ PD+FT S + C L
Sbjct: 129 RKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGAL 188
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
S + G Q H + + G V NAL+ Y KC + E ++F+EM R++V+W +++
Sbjct: 189 RSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSII 248
Query: 349 SGYAKFGKANETIDLFEKML--SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY 406
S A+FG N+ + LF +M G++PD+ T +L+ C+ +GR +++
Sbjct: 249 SAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRAN 308
Query: 407 GIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWA 466
+ I T ++ + S GRL AK N+M +A W +++ + +G +
Sbjct: 309 ITKNIIVE-TELVHMYSECGRLNYAKEIFNRMA-ERNAYSWNSMIEGYQQNGETQ----- 361
Query: 467 AESL-----LELDPYNPASYVLLSSIY-------ASKGKWDHVSQLRRTMREKGV 509
E+L ++L+ P + L S + + KG+ H +R TM E+G+
Sbjct: 362 -EALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGI 415
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 250/647 (38%), Positives = 382/647 (59%), Gaps = 32/647 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +SWN +I+G A +G +AV ++ +L+ GL S + SS + L
Sbjct: 376 MSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSL 435
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+Q+H H +K S FV + L+D Y+ R
Sbjct: 436 SKQVHVHAIKINNVSDSFVSTALIDAYS-------------------------------R 464
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
++E+ LF + D ++W M+ G Q+ + + LF M +G D FT +V
Sbjct: 465 NRCMKEAEILFE-RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATV 523
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
CG L A+ +GKQ+HA+ I++ + +++V S ++DMY KC + A+ F ++ +
Sbjct: 524 FKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDD 583
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+WT M+ G +NG E A +F M+ G+ PD+FT+ ++ + + L +LE+G Q H
Sbjct: 584 VAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHAN 643
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+L + V +LV Y KCG+I+D++ LF + + + +W A++ G A+ G+ ET
Sbjct: 644 ALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKET 703
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LF++M S G+KPD+VT IGVLSACS +GLV + + M +YGI+P +HY+C+ D
Sbjct: 704 LQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLAD 763
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
L RAG +++A++ I M A + TLL++CR+ G+ E GK A LLEL+P + ++
Sbjct: 764 ALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSA 823
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS++YA+ KWD + R M+ V+KDPG SWI+ K+++HIF DD S+ ++ I
Sbjct: 824 YVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELI 883
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y +++ + R + +EGYVP+ L DVE EK + L +HSEKLA+AFGLL PP PIRV
Sbjct: 884 YRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRV 943
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+KNLRVC DCHNA KYI+K+ REI++RDA RFH FK+G CSCGD+W
Sbjct: 944 IKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 192/459 (41%), Gaps = 75/459 (16%)
Query: 1 MPFHDGVSWNLLISGHASHG-----SVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSR 55
MP D VSWN +++ +A ++ A ++ ++ +D + SR+T S ML +
Sbjct: 100 MPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYT-SRMTLSPMLKLCLHS 158
Query: 56 RCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
V HG+ K G FV LV++Y
Sbjct: 159 GYVWASESFHGYACKIGLDGDEFVAGALVNIY---------------------------- 190
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
L+ G V+E + LF M +D + W M+ ++ G + EAIDL GL ++
Sbjct: 191 ---LKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEI 247
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
T + G + Q+ +F ND + +E +FR
Sbjct: 248 TLRLLARISGDD---SDAGQVKSFANGND-------------------ASSVSEIIFRNK 285
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
L Y +G +K F +M + +E D T ++++ + SL G
Sbjct: 286 G----------LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQ 335
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
Q H +L GL +TVSN+L+ Y K + +F+ M+ RD +SW ++++G A+ G
Sbjct: 336 QVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNG 395
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
E + LF ++L GLKPD+ T+ VL A S L E ++ V I + D +
Sbjct: 396 LEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS--SLPEGLSLSKQVHVHAIKINNVSDSF 453
Query: 416 --TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
T +ID SR ++EA+ + F D + W +++
Sbjct: 454 VSTALIDAYSRNRCMKEAEILFERHNF--DLVAWNAMMA 490
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 96/192 (50%), Gaps = 5/192 (2%)
Query: 193 GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
GK HA I+ + F+ + L+ MY KC S+ YA VF M +++VSW ++L Y Q
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 253 NG-CSEEAVK----IFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
+ C E ++ +F ++++ + TL ++ C + + FHG + GL
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLD 177
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
V+ ALV Y K G +++ LF EM RD V W ++ Y + G E IDL
Sbjct: 178 GDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAF 237
Query: 368 LSHGLKPDEVTL 379
S GL P+E+TL
Sbjct: 238 HSSGLNPNEITL 249
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 94/184 (51%), Gaps = 7/184 (3%)
Query: 100 FDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNG---LE- 155
F+E PE+ ++ N +I+ + G + +RR+F M D+D +SW +++ Q+ +E
Sbjct: 68 FEENPERFLI--NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVEN 125
Query: 156 -REAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSA 214
++A LFR +R + + + T +L C + + H + + + FV A
Sbjct: 126 IQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGA 185
Query: 215 LVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD 274
LV++Y K +K + +F M +++VV W ML Y + G EEA+ + +G+ P+
Sbjct: 186 LVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPN 245
Query: 275 DFTL 278
+ TL
Sbjct: 246 EITL 249
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 244/644 (37%), Positives = 382/644 (59%), Gaps = 36/644 (5%)
Query: 35 DGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIY 94
DG+ + T+STM+ S +D ++G S + L+ A+ G I
Sbjct: 283 DGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQ----TALLTGLARCGRIT 338
Query: 95 DAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGL 154
+A+ F+++P+ +V +N MITG ++ G+V+E++ LF M +++ISW MI G QNG
Sbjct: 339 EARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGR 398
Query: 155 EREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSA 214
EA+DL + + G+ + S AC + ALE G+Q+H+ ++ + N +V +A
Sbjct: 399 SEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNA 458
Query: 215 LVDMYCKCKSIKYAESVFR------TMAW-------------------------KNVVSW 243
L+ MY KC++++Y VF T++W ++VVSW
Sbjct: 459 LISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSW 518
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
T ++ Y Q +EAV+ F M +P+ L ++S C L S + G Q H ++
Sbjct: 519 TTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIK 578
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
G+ S + V+NAL++ Y KCG DSH++F+ M RD +W ++G A+ G E I +
Sbjct: 579 HGMDSELIVANALMSMYFKCG-CADSHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKM 637
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
+E M S G+ P+EVT +G+L+ACS AGLV++G +F+ M ++YG+ P+ +HY CM+D+L
Sbjct: 638 YEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLG 697
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
R G ++ A+ FI MP PD + W+ LL +C+IH N EIG+ AAE L +P N +YV+
Sbjct: 698 RTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVM 757
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LS+IY+S G W V++LR+ M+++GV K+PGCSW++ +++VH F D ++I
Sbjct: 758 LSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDYT 817
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
L+ L + GYVPD VLHD++ +K L +HSEKLA+A+GLL P G+PI+++KN
Sbjct: 818 LQDLYTLLRGTGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKN 877
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LR+C DCH K++S +T+R+I +RD RFH F+NG CSCGDFW
Sbjct: 878 LRICGDCHTFIKFVSHVTKRDIDIRDGNRFHHFRNGSCSCGDFW 921
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 250/510 (49%), Gaps = 33/510 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D ++WN +IS + + G + DA +++ + GN + +T+L+ +R L
Sbjct: 59 MPHRDIIAWNSMISAYCNSGMLEDARILFDAISG---GN---VRTATILLSGYAR----L 108
Query: 61 GRQIHGHILKFGFGSYVFVG-SPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
GR + + G V + +V Y + G I A+R FD +P +++ +N+M+TG
Sbjct: 109 GRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGYC 168
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ ++ LF+ M ++ ++WT MI+G ++ + D+FR M EG + DQ F S
Sbjct: 169 HSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFAS 228
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK-CKSIKYAESVFRTMAWK 238
VL+A GL L + + +++ + +V +G++++++Y + ++ A F M +
Sbjct: 229 VLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVER 288
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE-GTQF 297
N +W+ M+ G + A+ ++ G +P + S+ S A L L G
Sbjct: 289 NEYTWSTMIAALSHGGRIDAAIAVY------GRDP----VKSIPSQTALLTGLARCGRIT 338
Query: 298 HGRSLVTGLISFITVS-NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
R L + I VS NA++T Y + G ++++ LF+ M R+ +SW +++GYA+ G+
Sbjct: 339 EARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGR 398
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
+ E +DL + + +G+ P +L ACS G +E GR + VK G + + Y
Sbjct: 399 SEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKA-GCQ--FNSYV 455
Query: 417 C--MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
C +I + + +E + N+M D + W + +++ + +E + +++L D
Sbjct: 456 CNALISMYGKCRNMEYVRQVFNRMRV-KDTVSWNSFIAALVQNNMLEDARHIFDNMLSRD 514
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTM 504
S+ + S YA + D + +TM
Sbjct: 515 ---VVSWTTIISAYAQAERGDEAVEFFKTM 541
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 163/375 (43%), Gaps = 34/375 (9%)
Query: 111 YNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR-----EM 165
++ I L R G + E+R +F M +D I+W +MI+ +G+ +A LF +
Sbjct: 36 HSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNV 95
Query: 166 RLEGLAMDQFT-FGSVLTACGGLLALEE------GKQIHAFIIRND-----------HKD 207
R + + + G VL A + E + ++ D
Sbjct: 96 RTATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSR 155
Query: 208 NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQ 267
+V +++V YC + + A ++F+ M +N+V+WT M+ GY + + IF M
Sbjct: 156 DVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMH 215
Query: 268 RNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIE 327
G PD SV+S+ L L L TG S + + +++ Y + +
Sbjct: 216 HEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASAL 275
Query: 328 D-SHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSAC 386
D + + F+ M R+E +W+ +++ + G+ + I ++ + + P + L+ L+ C
Sbjct: 276 DIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSI-PSQTALLTGLARC 334
Query: 387 SRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIG 446
R + + R FE + PI + MI + G ++EAK ++MPF + I
Sbjct: 335 GR---ITEARILFEQIPD-----PIVVSWNAMITGYMQNGMVDEAKELFDRMPF-RNTIS 385
Query: 447 WATLLSSCRIHGNVE 461
WA +++ +G E
Sbjct: 386 WAGMIAGYAQNGRSE 400
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 249/678 (36%), Positives = 392/678 (57%), Gaps = 37/678 (5%)
Query: 6 GVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIH 65
V+W +LI G++ +A +++ M + G +TF T+L + + Q+
Sbjct: 109 AVTWTILIGGYSQLNQFKEAFELFVQMQRCGT-EPDYVTFVTLLSGCNGHEMGNQITQVQ 167
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEK------------------- 106
I+K G+ S + VG+ LVD Y K + A + F E+PE
Sbjct: 168 TQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVLCANIGLDDIV 227
Query: 107 ----------------NIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLM 150
N+ + N ++ + V ++R+LF M ++D +S+ +I+G
Sbjct: 228 LGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYA 287
Query: 151 QNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVF 210
+G + A DLFRE++ QF F ++L+ L E G+QIHA I +
Sbjct: 288 WDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEIL 347
Query: 211 VGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
VG++LVDMY KC + AE +F + ++ V WTAM+ Y Q G EE +++F M++
Sbjct: 348 VGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQAS 407
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
+ D T S++ + A++ASL G Q H + +G +S + +AL+ Y KCG+I+D+
Sbjct: 408 VIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAV 467
Query: 331 RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
+ F EM R+ VSW A++S YA+ G+A T+ F++M+ GL+PD V+ +GVLSACS +G
Sbjct: 468 QTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSG 527
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATL 450
LVE+G +F M + Y + P +HY ++D+L R+GR EA+ + +MP PD I W+++
Sbjct: 528 LVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSV 587
Query: 451 LSSCRIHGNVEIGKWAAESLLELDPY-NPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
L++CRIH N E+ + AA+ L ++ + A YV +S+IYA+ G+W++VS++ + MR++GV
Sbjct: 588 LNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGV 647
Query: 510 RKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVEL 569
+K P SW++ K H+FSA+D P ++I +++ L + M + GY PD S LH+ +
Sbjct: 648 KKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALHNEDE 707
Query: 570 SEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRD 629
K++ L +HSE+LAIAF L+ P G PI V+KNLR C DCH A K ISKI REI VRD
Sbjct: 708 KFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREITVRD 767
Query: 630 AVRFHLFKNGECSCGDFW 647
+ RFH F++G CSCGDFW
Sbjct: 768 STRFHHFRDGFCSCGDFW 785
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/352 (32%), Positives = 185/352 (52%), Gaps = 34/352 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP DGVS+N++ISG+A G A ++ L+ + + F+TML ++S+ ++
Sbjct: 271 MPEQDGVSYNVIISGYAWDGKHKYAFDLFR-ELQFTAFDRKQFPFATMLSIASNTLDWEM 329
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQIH + S + VG+ LVDMYAK G +A+ F L ++ V + MI+ ++
Sbjct: 330 GRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQ 389
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+G EE GL+ LF +MR + DQ TF S+
Sbjct: 390 KGFYEE--------------------------GLQ-----LFNKMRQASVIADQATFASL 418
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A + +L GKQ+H+FII++ NVF GSAL+D+Y KC SIK A F+ M +N+
Sbjct: 419 LRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNI 478
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT-QFHG 299
VSW AM+ Y QNG +E +K F M +G++PD + V+S+C++ +EEG F+
Sbjct: 479 VSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNS 538
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
+ + L ++V + G ++ +L EM + DE+ W+++++
Sbjct: 539 MTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNA 590
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 195/429 (45%), Gaps = 39/429 (9%)
Query: 35 DGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIY 94
+ L NL+ +T ++ + S + +++ I I+K GF + V + K G +
Sbjct: 7 NALQNLTSLT--SLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELS 64
Query: 95 DAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGL 154
A++ F+++P KN V N MI+G ++ G + E+R+LF GM ++ +++WT +I G Q
Sbjct: 65 QARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQ 124
Query: 155 EREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSA 214
+EA +LF +M+ G D TF ++L+ C G + Q+ II+ + + VG+
Sbjct: 125 FKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNT 184
Query: 215 LVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD 274
LVD YCK + A +F+ M E D
Sbjct: 185 LVDSYCKSNRLDLACQLFKEMP-----------------------------------EID 209
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN 334
FT +V+ + L + G Q H + T + + VSNAL+ FY K ++ D+ +LF+
Sbjct: 210 SFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFD 269
Query: 335 EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEK 394
EM +D VS+ ++SGYA GK DLF ++ + +LS S E
Sbjct: 270 EMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEM 329
Query: 395 GRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
GR + I ++D+ ++ G+ EEA+ + A+ W ++S+
Sbjct: 330 GRQIHAQTIVTTADSEILVG-NSLVDMYAKCGKFEEAEMIFTNLTH-RSAVPWTAMISAY 387
Query: 455 RIHGNVEIG 463
G E G
Sbjct: 388 VQKGFYEEG 396
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 238/511 (46%), Positives = 335/511 (65%), Gaps = 31/511 (6%)
Query: 168 EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY 227
+G+ +QFT +V+ AC + +LE+GKQ H +II+ + +V V +ALV MY +C S++
Sbjct: 4 KGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLED 63
Query: 228 AESVFRTMA------W-------------------------KNVVSWTAMLVGYGQNGCS 256
A VF M+ W ++VVSWTA++ GY QNG
Sbjct: 64 AGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYG 123
Query: 257 EEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNAL 316
+E++ +F M++ G++ D F +GSV+S+CA+LA+LE G QFH + +G I V +AL
Sbjct: 124 DESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSAL 183
Query: 317 VTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDE 376
V Y K G++ED+ ++F++M R+EVSW ++++G A+ G+ N+ + LFE+ML G+KP+E
Sbjct: 184 VDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNE 243
Query: 377 VTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFIN 436
++ +GVLSACS GLV +GR YF +M + YGI P HYTCMID+L RAG L+EA++FIN
Sbjct: 244 ISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFIN 303
Query: 437 KMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDH 496
MP PD W LL +CRIHGN E+ K AE LL ++ YVLLS+IYA+ G+WD
Sbjct: 304 GMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWDD 363
Query: 497 VSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGY 556
+++R+ M+++GV K PG SWI+ K+ +H F A + S P +I+ LE L+RKM GY
Sbjct: 364 AAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKAAGY 423
Query: 557 VPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKY 616
VP+ + VL DVE EK L+HHSEKLAIAFG++ PG IRV KNLRVC DCH K+
Sbjct: 424 VPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGDCHTVIKF 483
Query: 617 ISKITQREILVRDAVRFHLFKNGECSCGDFW 647
IS R+I+VRDA RFH FK+G CSCGD+W
Sbjct: 484 ISLNFTRKIVVRDANRFHHFKDGRCSCGDYW 514
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 189/312 (60%), Gaps = 6/312 (1%)
Query: 41 SRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF 100
++ T ST++ +S ++ G+Q H +I+K GF S V V + LV MYA+ G + DA F
Sbjct: 9 NQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVF 68
Query: 101 DELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAID 160
D++ E++ +N MITG + ++++ +LF M ++D +SWT +I G QNG E+++
Sbjct: 69 DKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLN 128
Query: 161 LFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYC 220
+F +MR G+ D+F GSVL+AC L ALE G+Q HA+++++ ++ VGSALVDMY
Sbjct: 129 VFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYA 188
Query: 221 KCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGS 280
K S++ A VF M +N VSW +++ G Q+G +AV +F M + GI+P++ +
Sbjct: 189 KSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVG 248
Query: 281 VISSCANLASLEEGTQFHGRSLVT---GLISFITVSNALVTFYGKCGNIEDSHRLFNEMN 337
V+S+C++ + EG + +L+T G++ ++ ++ G+ G ++++ N M
Sbjct: 249 VLSACSHTGLVNEGRGYF--NLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMP 306
Query: 338 VRDEVS-WTALV 348
V +VS W AL+
Sbjct: 307 VEPDVSVWGALL 318
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 121/225 (53%), Gaps = 35/225 (15%)
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M G++P+ FTL +V+ +CA++ASLE+G Q H + G S + V ALV Y +CG+
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 326 IEDSH-------------------------------RLFNEMNVRDEVSWTALVSGYAKF 354
+ED+ +LF EM+ RD VSWTA+++GYA+
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE-YGIRPIHD 413
G +E++++F +M G+K D + VLSAC+ +E GR + +V+ + + +
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180
Query: 414 HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ ++D+ +++G +E+A +KMP + + W ++++ C HG
Sbjct: 181 --SALVDMYAKSGSMEDACQVFDKMP-QRNEVSWNSIITGCAQHG 222
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 130/264 (49%), Gaps = 34/264 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSW +I+G+A +G ++++ V+N M K G+ + R ++L + ++L
Sbjct: 102 MSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKS-DRFIMGSVLSACADLAALEL 160
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ H ++++ GF + VGS LVDMYAK G + DA + FD++P++N V +N++I
Sbjct: 161 GRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSII----- 215
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
TG Q+G +A+ LF +M G+ ++ +F V
Sbjct: 216 --------------------------TGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGV 249
Query: 181 LTACGGLLALEEGKQIHAFIIRN-DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
L+AC + EG+ + +N +V + ++D+ + + AE+ M +
Sbjct: 250 LSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEP 309
Query: 240 VVS-WTAMLVGYGQNGCSEEAVKI 262
VS W A+L +G +E A +I
Sbjct: 310 DVSVWGALLGACRIHGNTELAKRI 333
>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Brachypodium distachyon]
Length = 682
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 256/647 (39%), Positives = 386/647 (59%), Gaps = 35/647 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VS NLL+SG+AS G +DA+ +LK +L+ ST L ++ R +
Sbjct: 71 MPSRNAVSGNLLMSGYASAGRHSDALA----LLKAADFSLNEYVLSTALSAAAHVRSYGM 126
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ HG+ +K G + +V + ++ MY + + DA + F+ + +I +N
Sbjct: 127 GRQCHGYAVKSGLQEHPYVCNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFN-------- 178
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+MI G + G +I + R M E D ++ +V
Sbjct: 179 -----------------------SMINGFLDLGEFDGSIRIVRSMVGEVEQWDHVSYVAV 215
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C L G Q+HA ++ + NV+VGSALVDMY KC + A S F + KNV
Sbjct: 216 LGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVLPEKNV 275
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWTA++ Y QN E+A+++F +++ G+ P++FT ++SCA LA+L+ G
Sbjct: 276 VSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAGLAALKNGNALSAS 335
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ TG ++V NAL+ Y K G+I D+ R+F M RD VSW +++ GYA G A E
Sbjct: 336 AMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVIIGYAHHGLAREA 395
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ +F ML + P VT +GVL AC++ GLV++G +Y IM+KE GI+P +HYTCM+
Sbjct: 396 MCVFHDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIKPGREHYTCMVG 455
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAGRL+EA+ FI D + W +LLSSC+++ N +G AE +L+L P + +
Sbjct: 456 LLCRAGRLDEAEQFILSNCIGTDVVAWKSLLSSCQVYKNYGLGHRVAEQILQLKPNDVGT 515
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS++YA +WD V ++R+ MRE+GVRK+PG SWI+ S VH+F+++D + + +QI
Sbjct: 516 YVLLSNMYAKANRWDGVVKVRKLMRERGVRKEPGVSWIQVGSEVHVFTSEDKNHKWINQI 575
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
+L++L ++ GYVP+ + VLHDVE +K + L +HSEK+A+AFGL+ P G IR+
Sbjct: 576 TIKLKELIGQIKVIGYVPNCAVVLHDVEAEQKEEHLMYHSEKMALAFGLIHSPEGETIRI 635
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+KNLR+C DCH A K IS +T+R+I+VRD VRFH +G CSC D+W
Sbjct: 636 MKNLRICDDCHVAIKLISVVTRRKIVVRDTVRFHCIDDGVCSCDDYW 682
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 128/263 (48%), Gaps = 10/263 (3%)
Query: 193 GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
GK IHA +IR H D V + L+ Y KC + A +F M +N VS ++ GY
Sbjct: 30 GKAIHAQMIRAAHFD-VIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSGYAS 88
Query: 253 NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITV 312
G +A+ + ++ +++ L + +S+ A++ S G Q HG ++ +GL V
Sbjct: 89 AGRHSDALAL---LKAADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPYV 145
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGL 372
NA++ Y +C ++ED+ ++F ++ D ++ ++++G+ G+ + +I + M+
Sbjct: 146 CNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVGEVE 205
Query: 373 KPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--TCMIDILSRAGRLEE 430
+ D V+ + VL C+ + G ++ + R + Y + ++D+ + +
Sbjct: 206 QWDHVSYVAVLGHCASTKELLLG---CQVHAQALKRRLEQNVYVGSALVDMYGKCDCARD 262
Query: 431 AKSFINKMPFPPDAIGWATLLSS 453
A S +P + + W ++++
Sbjct: 263 AHSAFEVLP-EKNVVSWTAVMTA 284
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 30/189 (15%)
Query: 314 NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLK 373
N L+ FYGKCG + + ++F+ M R+ VS L+SGYA G+ ++ + L + +
Sbjct: 49 NHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSGYASAGRHSDALALLK---AADFS 105
Query: 374 PDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH-YTC--MIDILSRAGRLEE 430
+E L LSA + GR VK + +H Y C ++ + + +E+
Sbjct: 106 LNEYVLSTALSAAAHVRSYGMGRQCHGYAVKS----GLQEHPYVCNAVLHMYCQCAHVED 161
Query: 431 A-KSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYA 489
A K F N F D + ++ I+G +++G++ S ++ S+
Sbjct: 162 AVKVFENVSGF--DIFAFNSM-----INGFLDLGEF------------DGSIRIVRSMVG 202
Query: 490 SKGKWDHVS 498
+WDHVS
Sbjct: 203 EVEQWDHVS 211
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 261/655 (39%), Positives = 390/655 (59%), Gaps = 42/655 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VS+N LI+ +A G A +++ L +++ ++ T S I+++ V L
Sbjct: 100 MPQPDSVSYNTLIAAYARRGDTQPAFQLF-LEMREAFLDMDGFTLSG--IITACGINVGL 156
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
RQ+H + G SYV VG+ L+ Y+K
Sbjct: 157 IRQLHALSVVTGLDSYVSVGNALITSYSK------------------------------- 185
Query: 121 RGLVEESRRLFRGM-KDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
G ++E+RR+F + +D+D +SW +M+ MQ+ +A++L+ EM + GL +D FT S
Sbjct: 186 NGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLAS 245
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY-AESVFRTMAWK 238
VLTA + L G Q HA +I++ + N VGS L+D+Y KC VF ++
Sbjct: 246 VLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNP 305
Query: 239 NVVSWTAMLVGYG-QNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
++V W M+ GY S+EA++ F +Q G PDD +L VIS+C+N++S +G Q
Sbjct: 306 DLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQV 365
Query: 298 HGRSLVTGLIS-FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
HG +L + S I+V+NAL+ Y KCGN+ D+ LF+ M + VS+ ++++GYA+ G
Sbjct: 366 HGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGM 425
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
+++ LF++ML P +T I VL+AC+ G VE G+ YF +M +++GI P H++
Sbjct: 426 GFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFS 485
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY 476
CMID+L RAG+L EA+ I +PF P W+ LL +CRIHGNVE+ AA LL+LDP
Sbjct: 486 CMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPL 545
Query: 477 NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPY 536
N A YV+L++IY+ G+ + +R+ MR++GV+K PGCSWI+ R+HIF A+D P
Sbjct: 546 NAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPM 605
Query: 537 SDQIYAELEKLNRKMIKEGYVPDM--SSVLHD--VELSEKIKMLNHHSEKLAIAFGLLFI 592
+I LE++ RK+ K GY P++ +SV D V E+ L HHSEKLA++FGL+
Sbjct: 606 IKKIQEYLEEMMRKIKKVGYTPEVRSASVGGDDRVWQREEELRLGHHSEKLAVSFGLMST 665
Query: 593 PPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G PI V KNLR+C DCHNA KYIS++ +REI VRD+ RFH FK+G+CSCG +W
Sbjct: 666 REGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 246/647 (38%), Positives = 377/647 (58%), Gaps = 32/647 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN LISG +G + A+++ M GL + S++L + DL
Sbjct: 263 MPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVP-NVFMLSSILKACAGAGAFDL 321
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQIHG ++K S ++G LVDMYAK + DA + FD + +++++
Sbjct: 322 GRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLIL---------- 371
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
W +I+G G EA +F +R EGL +++ T +V
Sbjct: 372 ---------------------WNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAV 410
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L + L A +Q+HA + + V + L+D Y KC + A VF + ++
Sbjct: 411 LKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDI 470
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
++ T+M+ Q E A+K+F M R G+EPD F L S++++CA+L++ E+G Q H
Sbjct: 471 IAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAH 530
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ +S NALV Y KCG+IED+ F+ + R VSW+A++ G A+ G
Sbjct: 531 LIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRA 590
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++LF +M+ G+ P+ +T+ VL AC+ AGLV++ + YF M + +GI +HY+CMID
Sbjct: 591 LELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMID 650
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG+L++A +N MPF +A W LL + R+H + E+GK AAE L L+P +
Sbjct: 651 LLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGT 710
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
+VLL++ YAS G W+ V+++R+ M++ ++K+P SW++ K +VH F D S P + +I
Sbjct: 711 HVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEI 770
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y++L++L M K GY+P++ LHD++ SEK +L+HHSE+LA+AF LL PPG PIRV
Sbjct: 771 YSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRV 830
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLR+C DCH A K+IS I REI++RD RFH F++G CSCGD+W
Sbjct: 831 KKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/508 (26%), Positives = 244/508 (48%), Gaps = 45/508 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
+ VSWN L+S + + DA++V+ M+ G+ + FS ++ + R +D GRQ+
Sbjct: 166 NAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGI-QPTEFGFSCVVNACTGSRNIDAGRQV 224
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +++ G+ VF + LVDMY K+ G V
Sbjct: 225 HAMVVRMGYEKDVFTANALVDMYVKM-------------------------------GRV 253
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ + +F M D D +SW +I+G + NG + AI+L +M+ GL + F S+L AC
Sbjct: 254 DIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKAC 313
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G A + G+QIH F+I+ + + ++G LVDMY K + A VF M+ ++++ W
Sbjct: 314 AGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWN 373
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
A++ G G +EA IF +++ G+ + TL +V+ S A+L + Q H +
Sbjct: 374 ALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKI 433
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G I V N L+ Y KC + D+ R+F E + D ++ T++++ ++ I LF
Sbjct: 434 GFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLF 493
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT--CMIDIL 422
+ML GL+PD L +L+AC+ E+G+ ++K + + D + ++
Sbjct: 494 MEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR---QFMSDAFAGNALVYTY 550
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL--DPYNPAS 480
++ G +E+A+ + +P + W+ ++ HG+ GK A E + + NP
Sbjct: 551 AKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLAQHGH---GKRALELFGRMVDEGINPNH 606
Query: 481 YVLLSSIYASK--GKWDHVSQLRRTMRE 506
+ S + A G D + +M+E
Sbjct: 607 ITMTSVLCACNHAGLVDEAKRYFNSMKE 634
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 194/389 (49%), Gaps = 42/389 (10%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCV--- 58
P H VSW+ L++ ++++G A++ ++ M +G+ + +L +CV
Sbjct: 66 PCH--VSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVC-CNEFALPVVL------KCVPDA 116
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
LG Q+H + GFGS VFV + LV MY G + DA+R FDE
Sbjct: 117 QLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDE---------------- 160
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+++++SW +++ ++N +AI +F EM G+ +F F
Sbjct: 161 --------------AGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFS 206
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
V+ AC G ++ G+Q+HA ++R ++ +VF +ALVDMY K + A +F M
Sbjct: 207 CVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDS 266
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+VVSW A++ G NG A+++ M+ +G+ P+ F L S++ +CA + + G Q H
Sbjct: 267 DVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIH 326
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G + S + LV Y K ++D+ ++F+ M+ RD + W AL+SG + G+ +
Sbjct: 327 GFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHD 386
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACS 387
E +F + GL + TL VL + +
Sbjct: 387 EAFSIFYGLRKEGLGVNRTTLAAVLKSTA 415
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 191/418 (45%), Gaps = 44/418 (10%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
T S L ++ + + G +H ++LK GF + + L+ Y+K A+R FDE+
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHANLLKSGF--LASLRNHLISFYSKCRRPCCARRVFDEI 63
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
P D +SW++++T NGL R AI F
Sbjct: 64 P-------------------------------DPCHVSWSSLVTAYSNNGLPRSAIQAFH 92
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
MR EG+ ++F VL + + G Q+HA + +VFV +ALV MY
Sbjct: 93 GMRAEGVCCNEFALPVVLKC---VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFG 149
Query: 224 SIKYAESVF-RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
+ A VF + +N VSW ++ Y +N +A+++F M +GI+P +F V+
Sbjct: 150 FMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVV 209
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
++C +++ G Q H + G + +NALV Y K G ++ + +F +M D V
Sbjct: 210 NACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVV 269
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
SW AL+SG G + I+L +M S GL P+ L +L AC+ AG + GR M
Sbjct: 270 SWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFM 329
Query: 403 VKEYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+K D Y ++D+ ++ L++A + M D I W L+S C HG
Sbjct: 330 IKA---NADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSH-RDLILWNALISGCS-HG 382
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 165/345 (47%), Gaps = 21/345 (6%)
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSA---LVDMYCKCKSIKYAESVF 232
T LT AL G +HA ++++ F+ S L+ Y KC+ A VF
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHANLLKSG-----FLASLRNHLISFYSKCRRPCCARRVF 60
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
+ VSW++++ Y NG A++ F M+ G+ ++F L V+ C A L
Sbjct: 61 DEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFAL-PVVLKCVPDAQL- 118
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM-NVRDEVSWTALVSGY 351
G Q H ++ TG S + V+NALV YG G ++D+ R+F+E + R+ VSW L+S Y
Sbjct: 119 -GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAY 177
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
K + + I +F +M+ G++P E V++AC+ + ++ GR ++V+ G
Sbjct: 178 VKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVR-MGYEKD 236
Query: 412 HDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL 471
++D+ + GR++ A KMP D + W L+S C ++G+ A E LL
Sbjct: 237 VFTANALVDMYVKMGRVDIASVIFEKMP-DSDVVSWNALISGCVLNGH---DHRAIELLL 292
Query: 472 ELDPYNPASYV-LLSSIY---ASKGKWDHVSQLRRTMREKGVRKD 512
++ V +LSSI A G +D Q+ M + D
Sbjct: 293 QMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSD 337
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 246/647 (38%), Positives = 377/647 (58%), Gaps = 32/647 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN LISG +G + A+++ M GL + S++L + DL
Sbjct: 170 MPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVP-NVFMLSSILKACAGAGAFDL 228
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQIHG ++K S ++G LVDMYAK + DA + FD + +++++
Sbjct: 229 GRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLIL---------- 278
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
W +I+G G EA +F +R EGL +++ T +V
Sbjct: 279 ---------------------WNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAV 317
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L + L A +Q+HA + + V + L+D Y KC + A VF + ++
Sbjct: 318 LKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDI 377
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
++ T+M+ Q E A+K+F M R G+EPD F L S++++CA+L++ E+G Q H
Sbjct: 378 IAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAH 437
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ +S NALV Y KCG+IED+ F+ + R VSW+A++ G A+ G
Sbjct: 438 LIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRA 497
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++LF +M+ G+ P+ +T+ VL AC+ AGLV++ + YF M + +GI +HY+CMID
Sbjct: 498 LELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMID 557
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG+L++A +N MPF +A W LL + R+H + E+GK AAE L L+P +
Sbjct: 558 LLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGT 617
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
+VLL++ YAS G W+ V+++R+ M++ ++K+P SW++ K +VH F D S P + +I
Sbjct: 618 HVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEI 677
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y++L++L M K GY+P++ LHD++ SEK +L+HHSE+LA+AF LL PPG PIRV
Sbjct: 678 YSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRV 737
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLR+C DCH A K+IS I REI++RD RFH F++G CSCGD+W
Sbjct: 738 KKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 784
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/508 (26%), Positives = 244/508 (48%), Gaps = 45/508 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
+ VSWN L+S + + DA++V+ M+ G+ + FS ++ + R +D GRQ+
Sbjct: 73 NAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGI-QPTEFGFSCVVNACTGSRNIDAGRQV 131
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +++ G+ VF + LVDMY K+ G V
Sbjct: 132 HAMVVRMGYEKDVFTANALVDMYVKM-------------------------------GRV 160
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ + +F M D D +SW +I+G + NG + AI+L +M+ GL + F S+L AC
Sbjct: 161 DIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKAC 220
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G A + G+QIH F+I+ + + ++G LVDMY K + A VF M+ ++++ W
Sbjct: 221 AGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWN 280
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
A++ G G +EA IF +++ G+ + TL +V+ S A+L + Q H +
Sbjct: 281 ALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKI 340
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G I V N L+ Y KC + D+ R+F E + D ++ T++++ ++ I LF
Sbjct: 341 GFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLF 400
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT--CMIDIL 422
+ML GL+PD L +L+AC+ E+G+ ++K + + D + ++
Sbjct: 401 MEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR---QFMSDAFAGNALVYTY 457
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL--DPYNPAS 480
++ G +E+A+ + +P + W+ ++ HG+ GK A E + + NP
Sbjct: 458 AKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLAQHGH---GKRALELFGRMVDEGINPNH 513
Query: 481 YVLLSSIYASK--GKWDHVSQLRRTMRE 506
+ S + A G D + +M+E
Sbjct: 514 ITMTSVLCACNHAGLVDEAKRYFNSMKE 541
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 168/335 (50%), Gaps = 33/335 (9%)
Query: 56 RCV---DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYN 112
+CV LG Q+H + GFGS VFV + LV MY G + DA+R FDE
Sbjct: 18 KCVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDE---------- 67
Query: 113 TMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM 172
+++++SW +++ ++N +AI +F EM G+
Sbjct: 68 --------------------AGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQP 107
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
+F F V+ AC G ++ G+Q+HA ++R ++ +VF +ALVDMY K + A +F
Sbjct: 108 TEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIF 167
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
M +VVSW A++ G NG A+++ M+ +G+ P+ F L S++ +CA + +
Sbjct: 168 EKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFD 227
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
G Q HG + S + LV Y K ++D+ ++F+ M+ RD + W AL+SG +
Sbjct: 228 LGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCS 287
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS 387
G+ +E +F + GL + TL VL + +
Sbjct: 288 HGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTA 322
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 144/297 (48%), Gaps = 11/297 (3%)
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
MR EG+ ++F VL + + G Q+HA + +VFV +ALV MY
Sbjct: 1 MRAEGVCCNEFALPVVLKC---VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57
Query: 225 IKYAESVF-RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
+ A VF + +N VSW ++ Y +N +A+++F M +GI+P +F V++
Sbjct: 58 MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 117
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+C +++ G Q H + G + +NALV Y K G ++ + +F +M D VS
Sbjct: 118 ACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVS 177
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
W AL+SG G + I+L +M S GL P+ L +L AC+ AG + GR M+
Sbjct: 178 WNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMI 237
Query: 404 KEYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
K D Y ++D+ ++ L++A + M D I W L+S C HG
Sbjct: 238 KA---NADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSH-RDLILWNALISGCS-HG 289
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 125/252 (49%), Gaps = 13/252 (5%)
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M+ G+ ++F L V+ C A L G Q H ++ TG S + V+NALV YG G
Sbjct: 1 MRAEGVCCNEFAL-PVVLKCVPDAQL--GAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57
Query: 326 IEDSHRLFNEM-NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
++D+ R+F+E + R+ VSW L+S Y K + + I +F +M+ G++P E V++
Sbjct: 58 MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 117
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDA 444
AC+ + ++ GR ++V+ G ++D+ + GR++ A KMP D
Sbjct: 118 ACTGSRNIDAGRQVHAMVVR-MGYEKDVFTANALVDMYVKMGRVDIASVIFEKMP-DSDV 175
Query: 445 IGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYV-LLSSIY---ASKGKWDHVSQL 500
+ W L+S C ++G+ A E LL++ V +LSSI A G +D Q+
Sbjct: 176 VSWNALISGCVLNGH---DHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQI 232
Query: 501 RRTMREKGVRKD 512
M + D
Sbjct: 233 HGFMIKANADSD 244
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 247/685 (36%), Positives = 394/685 (57%), Gaps = 43/685 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG--- 61
D V N +IS A AV V+ +L +L +S ++S+ + DL
Sbjct: 121 DTVLHNAMISAFARASLAAPAVSVFRSLLASD-DSLRPDDYSFTSLLSAVGQMHDLAVSH 179
Query: 62 -RQIHGHILKFGFGSYVFVGSPLVDMYAKL---GLIYDAKRGFDELPEKNIVMYNTMITG 117
Q+H + K G G+ + V + L+ +Y K G+ DA++ DE+PEK+ + + T++ G
Sbjct: 180 CTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVG 239
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
+R+G V +R F + + + W MI+G +Q+G+ EA +LFR M + + D+FTF
Sbjct: 240 HVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTF 299
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDH----KDNVFVGSALVDMYCKCKSIKYAESVFR 233
S+L+AC GK +H IR + + V +ALV +Y K I A +F
Sbjct: 300 TSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFD 359
Query: 234 TMAWKNVVSWTAMLVGYGQNGC-------------------------------SEEAVKI 262
+M K+VVSW +L GY ++GC +E+A+K+
Sbjct: 360 SMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKL 419
Query: 263 FCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGK 322
F M+ ++P D+T +++C L +L+ G Q H + G + + NAL+T Y +
Sbjct: 420 FNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYAR 479
Query: 323 CGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGV 382
CG ++D+ +F M D VSW A++S + G E ++LF++M++ G+ PD ++ + +
Sbjct: 480 CGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTI 539
Query: 383 LSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPP 442
L+AC+ AGLV+ G YFE M +++GI P DHY +ID+L RAGR+ EA+ I MPF P
Sbjct: 540 LTACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEP 599
Query: 443 DAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRR 502
W +LS CRI+G++E+G +AA+ L ++ P + +Y+LLS+ Y++ G+W +++R+
Sbjct: 600 TPAIWEAILSGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRK 659
Query: 503 TMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSS 562
MR++GV+K+PGCSWI+ ++VH+F D P + ++Y LE + KM K GYVPD
Sbjct: 660 LMRDRGVKKEPGCSWIEVGNKVHVFLVGDTKHPDAHEVYRFLEMVGAKMRKLGYVPDTKF 719
Query: 563 VLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQ 622
L D+ EK +L HSE+LA++FGLL +P G + V+KNL++C DCH A ++S+
Sbjct: 720 ALQDMAPHEKEYVLFAHSERLAVSFGLLKLPAGATVTVLKNLKICGDCHTAMMFMSRAVG 779
Query: 623 REILVRDAVRFHLFKNGECSCGDFW 647
REI+VRD RFH FK+GECSCG++W
Sbjct: 780 REIVVRDVRRFHHFKDGECSCGNYW 804
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 188/453 (41%), Gaps = 104/453 (22%)
Query: 80 GSPLVDMYAKLGLIYDAKRGFDELP--EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDK 137
+ LV YA G + D+ FD +P ++ V++N MI+ R L + +FR +
Sbjct: 92 ATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLAS 151
Query: 138 DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL--LALEEGKQ 195
D + L D ++F S+L+A G + LA+ Q
Sbjct: 152 D-----------------------------DSLRPDDYSFTSLLSAVGQMHDLAVSHCTQ 182
Query: 196 IHAFIIRNDHKDNVFVGSALVDMYCKCKS------------------------------- 224
+H + + + V +AL+ +Y KC +
Sbjct: 183 LHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVR 242
Query: 225 ---IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
+ A S F + + V W AM+ GY Q+G EA ++F M I PD+FT S+
Sbjct: 243 KGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSL 302
Query: 282 ISSCANLASLEEGTQFHGR--SLVTGLI--SFITVSNALVTFYGKCGNI----------- 326
+S+CAN G HG+ L + + + V+NALVT Y K G I
Sbjct: 303 LSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMT 362
Query: 327 --------------------EDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+++ R+F EM + E+SW +VSGY G A + + LF +
Sbjct: 363 LKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQ 422
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M S +KP + T G ++AC G ++ G+ +V + G + ++ + +R G
Sbjct: 423 MRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLV-QCGFEASNSAGNALLTMYARCG 481
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+++A+ MP D++ W ++S+ HG+
Sbjct: 482 AVKDARLVFLVMP-NVDSVSWNAMISALGQHGH 513
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 154/347 (44%), Gaps = 57/347 (16%)
Query: 212 GSALVDMYCKCKSIKYAESVFRTM--AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM--Q 267
++LV Y ++ + + F ++ A ++ V AM+ + + + AV +F ++
Sbjct: 92 ATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLAS 151
Query: 268 RNGIEPDDFTLGSVISSCANLASL--EEGTQFHGRSLVTGLISFITVSNALVTFYGKC-- 323
+ + PDD++ S++S+ + L TQ H G + ++VSNAL+ Y KC
Sbjct: 152 DDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDA 211
Query: 324 -GNIEDSHRLFNEMNVRDEVSWT-------------------------------ALVSGY 351
G D+ ++ +EM +DE++WT A++SGY
Sbjct: 212 PGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGY 271
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK------E 405
+ G E +LF +M+S + PDE T +LSAC+ AG G+ ++
Sbjct: 272 VQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVP 331
Query: 406 YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG-- 463
P+++ ++ + S++G++ A + M D + W T+LS G +E G
Sbjct: 332 EAALPVNN---ALVTLYSKSGKIAVATKIFDSMTL-KDVVSWNTILS-----GYIESGCL 382
Query: 464 KWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVR 510
AA E+ + S++++ S Y G + +L MR + V+
Sbjct: 383 DNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVK 429
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 85/169 (50%), Gaps = 5/169 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP+ +SW +++SG+ G DA+K++N M + + T++ + +
Sbjct: 392 MPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCD-YTYAGAVAACGELGALKH 450
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H H+++ GF + G+ L+ MYA+ G + DA+ F +P + V +N MI+ L +
Sbjct: 451 GKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQ 510
Query: 121 RGLVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREM 165
G E+ LF M + D IS+ T++T GL + F M
Sbjct: 511 HGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESM 559
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 93/207 (44%), Gaps = 19/207 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN +IS HG +A+++++ M+ G+ RI+F T+L + VD
Sbjct: 493 MPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYP-DRISFLTILTACNHAGLVDD 551
Query: 61 GRQIHGHILK-FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITGL 118
G Q + + FG + L+D+ + G I +A+ +P E ++ +++G
Sbjct: 552 GFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGC 611
Query: 119 LRRGLVE----ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
G +E + +LF+ + + D ++ + G +A + + MR G+ +
Sbjct: 612 RINGDMELGAYAADQLFKMVPEHDG-TYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEP 670
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFII 201
G +E G ++H F++
Sbjct: 671 -----------GCSWIEVGNKVHVFLV 686
>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 698
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 256/650 (39%), Positives = 388/650 (59%), Gaps = 36/650 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW L+SG + + DA+ + M + G+ +R S+ +++
Sbjct: 82 MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAP-TRFALSSAARAAAALGAPLP 140
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+H ++ GF + +FV S L DMY+K GL+
Sbjct: 141 GAQLHCVGVRLGFDTELFVASNLADMYSKCGLL--------------------------- 173
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL-AMDQFTFGS 179
E+ R+F M KD+++WT MI G +NG A+ FR+M+ EGL DQ F S
Sbjct: 174 ----SEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCS 229
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR--TMAW 237
VL+A GGL K IH + + + V V +AL+DMY K ++ A V + W
Sbjct: 230 VLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGW 289
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
NVVS T+M+ GY + C EEA+ I+ ++R G+EP++FT S+I CA A LE+G Q
Sbjct: 290 -NVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQL 348
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H + + T LI V + LV YGKCG I S +LFNE+ R +++W A+++ +A+ G
Sbjct: 349 HAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHG 408
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
E I F++M+ G++P+ + + +L+ACS AGLV++G YF M + +GI P +HY+C
Sbjct: 409 REAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSC 468
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
+ID RAGRL+EA FI++MP P+A GW +LL +CR+ G+ E+G+ AA++L++L+P N
Sbjct: 469 IIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGN 528
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
+V LS IYAS G+W+ V +R+ MR+ ++K PG SW+ + H+F ++DWS P
Sbjct: 529 TGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQ 588
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
IY +LE+L ++ +EGY+PD S + ++E K ++L +HSE++A+AF L+ +P P
Sbjct: 589 KDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKP 648
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
I V KNLR+C DCH A K+I K+ +R+I+VRD RFH F NG CSCGD+W
Sbjct: 649 IIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 698
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 172/354 (48%), Gaps = 8/354 (2%)
Query: 110 MYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG 169
+ N +IT + + RLF M ++++SWTT+++GL QN + +A+ F MR G
Sbjct: 58 LANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAG 117
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
+A +F S A L A G Q+H +R +FV S L DMY KC + A
Sbjct: 118 VAPTRFALSSAARAAAALGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEAC 177
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANL 288
VF M K+ V+WTAM+ GY +NG E AV F +M+R G + D SV+S+ L
Sbjct: 178 RVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGL 237
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN-EMNVRDEVSWTAL 347
H G + V NAL+ Y K ++E + R+ + + VS T++
Sbjct: 238 KDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSM 297
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYG 407
+ GY + E + ++ ++ G++P+E T ++ C+ L+E+G ++K
Sbjct: 298 IDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDL 357
Query: 408 IRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
IR D + + ++D+ + G + + N++ + D I W +++ HG+
Sbjct: 358 IR---DSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTD-IAWNAVINVFAQHGH 407
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 133/289 (46%), Gaps = 12/289 (4%)
Query: 177 FGSVLTACGGLLALEEGKQIHA-FIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
S+L +CG L G+ +HA ++ + F+ + L+ MY C + A +F M
Sbjct: 23 LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM 82
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
+N VSWT ++ G QN +A+ F M+R G+ P F L S + A L + G
Sbjct: 83 PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGA 142
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
Q H + G + + V++ L Y KCG + ++ R+F++M +D V+WTA++ GYAK G
Sbjct: 143 QLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNG 202
Query: 356 KANETIDLFEKMLSHGL-KPDEVTLIGVLSACS--RAGLVEKGRHYFEIMVKEYGIRPIH 412
+ F M GL D+ VLSA + G + K H V + G
Sbjct: 203 SLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIH---CCVTKAGFELEV 259
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+ID+ +++ +E A + P GW + + I G +E
Sbjct: 260 AVRNALIDMYAKSMDVESASRVLKIDPG-----GWNVVSGTSMIDGYIE 303
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 97/227 (42%), Gaps = 6/227 (2%)
Query: 273 PDDFT---LGSVISSCANLASLEEGTQFHGRSLVTGLISFIT-VSNALVTFYGKCGNIED 328
PD T L S++ SC L G H R +++G + T ++N L+T Y C ++
Sbjct: 15 PDAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLAS 74
Query: 329 SHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
+ RLF M R+ VSWT LVSG ++ + + F M G+ P L A +
Sbjct: 75 ALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAA 134
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
G G + V+ G + + D+ S+ G L EA ++MP DA+ W
Sbjct: 135 LGAPLPGAQLHCVGVR-LGFDTELFVASNLADMYSKCGLLSEACRVFDQMP-QKDAVAWT 192
Query: 449 TLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWD 495
++ +G++E + + +V S + AS G D
Sbjct: 193 AMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKD 239
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 255/645 (39%), Positives = 380/645 (58%), Gaps = 34/645 (5%)
Query: 4 HDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQ 63
D +SWN +ISG+ +G + ++++ ML G+ ++ T + + ++ + LG+
Sbjct: 315 RDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGV-DIDLATMVNVFVACANIGTLLLGKV 373
Query: 64 IHGHILKFG-FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
+H + +K V + L+DMY+K G + N+ I
Sbjct: 374 LHSYSIKAATLDREVRFNNTLLDMYSKCGDL------------------NSAI------- 408
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
R+F M +K +SWT+MITG ++ GL AI LF EM+ G+ D + S+L
Sbjct: 409 ------RVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILN 462
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
AC L+ GK +H +I N+ + N FV +AL DMY KC S+K A VF M K+V+S
Sbjct: 463 ACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVIS 522
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL 302
W M+ GY +N EA+ +F MQR +PD T+ ++ +CA+LA+L++G + HG +L
Sbjct: 523 WNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACASLAALDKGREIHGYAL 581
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
G V+NA+V Y KCG + + LF+ + +D VSWT +++GY G +E I+
Sbjct: 582 RNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAIN 641
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL 422
F +M G++PDEV+ I +L ACS +GL+++G F IM KE I P +HY CM+D+L
Sbjct: 642 TFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLL 701
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYV 482
+R G L +A FI MP PDA W LL CRIH +V++ + AE + EL+P N YV
Sbjct: 702 ARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYV 761
Query: 483 LLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYA 542
LL++IYA KW+ V +LR+ + ++G++K+PGCSWI+ K +++IF A D S P + +I
Sbjct: 762 LLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIEL 821
Query: 543 ELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVK 602
L++L KM +EGY P + L + + EK L HSEKLA+AFG+L +PPG IRV K
Sbjct: 822 LLKRLRSKMKEEGYSPKTAYALLNADEREKEVALCGHSEKLAMAFGMLNLPPGKTIRVTK 881
Query: 603 NLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
NLRVC DCH K++SK REI++RD+ RFH FK+G CSC +W
Sbjct: 882 NLRVCGDCHEMAKFMSKSASREIILRDSSRFHHFKDGSCSCRGYW 926
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 140/455 (30%), Positives = 237/455 (52%), Gaps = 44/455 (9%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WNL+IS ++ G+ +++ ++ ML+ G+ S TFS++L ++ V+ GRQ+HG I
Sbjct: 219 WNLMISEYSGSGNYGESINLFKQMLELGIKPNS-YTFSSILKCFAAVARVEEGRQVHGLI 277
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
K GF SY V + L+ Y + A++ FDEL +++++ +N+MI+G ++
Sbjct: 278 CKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVK-------- 329
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
NGL+ I++F +M + G+ +D T +V AC +
Sbjct: 330 -----------------------NGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIG 366
Query: 189 ALEEGKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
L GK +H++ I+ D V + L+DMY KC + A VF M K VVSWT+M+
Sbjct: 367 TLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMI 426
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
GY + G S+ A+K+F M+ G+ PD + + S++++CA +L+ G H L
Sbjct: 427 TGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLE 486
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
+ VSNAL Y KCG+++D+H +F+ M +D +SW ++ GY K NE + LF +M
Sbjct: 487 TNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEM 546
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH--DHY--TCMIDILS 423
KPD T+ +L AC+ ++KGR + Y +R + D Y ++D+
Sbjct: 547 QRES-KPDGTTVACILPACASLAALDKGRE-----IHGYALRNGYSEDKYVTNAVVDMYV 600
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ G L A+S + +P D + W +++ +HG
Sbjct: 601 KCGLLVLARSLFDMIP-NKDLVSWTVMIAGYGMHG 634
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 205/431 (47%), Gaps = 34/431 (7%)
Query: 22 VNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGS 81
V D L+ N + ++L + + R+ + GR++ I G +G
Sbjct: 130 VGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGV 189
Query: 82 PLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSIS 141
LV MY K G + + + FD+L E I +
Sbjct: 190 KLVFMYVKCGDLKEGRMVFDKLSESKIFL------------------------------- 218
Query: 142 WTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFII 201
W MI+ +G E+I+LF++M G+ + +TF S+L + +EEG+Q+H I
Sbjct: 219 WNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLIC 278
Query: 202 RNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVK 261
+ V ++L+ Y + ++ A+ +F + ++V+SW +M+ GY +NG + ++
Sbjct: 279 KLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIE 338
Query: 262 IFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF-ITVSNALVTFY 320
IF M G++ D T+ +V +CAN+ +L G H S+ + + +N L+ Y
Sbjct: 339 IFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMY 398
Query: 321 GKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLI 380
KCG++ + R+F M+ + VSWT++++GY + G ++ I LF++M S G+ PD +
Sbjct: 399 SKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVT 458
Query: 381 GVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF 440
+L+AC+ G ++ G+ + ++E + + D+ ++ G +++A + M
Sbjct: 459 SILNACAINGNLKSGKIVHD-YIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMK- 516
Query: 441 PPDAIGWATLL 451
D I W T++
Sbjct: 517 KKDVISWNTMI 527
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 169/375 (45%), Gaps = 41/375 (10%)
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
D + S+L C ++ +G+++ + I + + +G LV MY KC +K VF
Sbjct: 149 DLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVF 208
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
++ + W M+ Y +G E++ +F M GI+P+ +T S++ A +A +E
Sbjct: 209 DKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVE 268
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
EG Q HG G S+ TV N+L++FY + + +LF+E+ RD +SW +++SGY
Sbjct: 269 EGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYV 328
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
K G + I++F KML G+ D T++ V AC+ G + G+ +K +
Sbjct: 329 KNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREV 388
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMP--------------------------------- 439
++D+ S+ G L A +M
Sbjct: 389 RFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSR 448
Query: 440 -FPPDAIGWATLLSSCRIHGNVEIGK----WAAESLLELDPYNPASYVLLSSIYASKGKW 494
PD ++L++C I+GN++ GK + E+ LE + + + L+ +YA G
Sbjct: 449 GVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNA---LTDMYAKCGSM 505
Query: 495 DHVSQLRRTMREKGV 509
+ M++K V
Sbjct: 506 KDAHDVFSHMKKKDV 520
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 245/647 (37%), Positives = 376/647 (58%), Gaps = 32/647 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VSWN ISG HG A+++ M GL + T S++L + +L
Sbjct: 263 VPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVP-NVFTLSSILKACAGSGAFNL 321
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQIHG ++K S ++ LVDMYAK GL+ DAK+
Sbjct: 322 GRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKK---------------------- 359
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+F + +D + W +I+G EA+ LF MR EG +++ T +V
Sbjct: 360 ---------VFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAV 410
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L + L A+ + +Q+HA + + V + L+D Y KC + YA VF ++
Sbjct: 411 LKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDI 470
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+++T+M+ Q E+A+K+F M R G++PD F L S++++CA+L++ E+G Q H
Sbjct: 471 IAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAH 530
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ +S + NALV Y KCG+IED+ F+ + + VSW+A++ G A+ G
Sbjct: 531 LIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRA 590
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+D+F +M+ + P+ +T+ VL AC+ AGLV++ + YF M + +GI +HY CMID
Sbjct: 591 LDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMID 650
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG+L++A +N MPF +A W LL++ R+H + E+G+ AAE L L+P +
Sbjct: 651 LLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGT 710
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
+VLL++ YAS G WD V+++R+ M++ V+K+P SW++ K +VH F D S P + I
Sbjct: 711 HVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDI 770
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
YA+L++L M K GYVP++ LHDV+ +EK +L+HHSE+LA+AF L+ P G PIRV
Sbjct: 771 YAKLDELGDLMTKAGYVPNVEVDLHDVDKNEKELLLSHHSERLAVAFALISTPAGAPIRV 830
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLR+C DCH A K+IS I REI++RD RFH F++G CSC D+W
Sbjct: 831 KKNLRICRDCHAAFKFISDIVSREIIIRDINRFHHFRDGACSCRDYW 877
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/504 (25%), Positives = 247/504 (49%), Gaps = 41/504 (8%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSWN L+S + + + AVKV+ M+ G+ + FS ++ + R ++ GR++H
Sbjct: 168 VSWNGLMSAYVKNDRCSHAVKVFGEMVWGGV-QPNEFGFSCVVNACTGSRDLEAGRKVHA 226
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+++ G+ VF + LVDMY+KLG I A F ++PE ++V
Sbjct: 227 MVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVV----------------- 269
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
SW I+G + +G ++ A++L +M+ GL + FT S+L AC G
Sbjct: 270 --------------SWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAG 315
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
A G+QIH F+++ + + ++ LVDMY K + A+ VF + +++V W A+
Sbjct: 316 SGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNAL 375
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ G EA+ +FC M++ G + + TL +V+ S A+L ++ + Q H + G
Sbjct: 376 ISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGF 435
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+S V N L+ Y KC + ++R+F + D +++T++++ ++ + I LF +
Sbjct: 436 LSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFME 495
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
ML GL PD L +L+AC+ E+G+ ++K + + ++ ++ G
Sbjct: 496 MLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAG-NALVYTYAKCG 554
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL-DPYNPASYVLLS 485
+E+A + +P + W+ ++ HG+ GK A + + D + +++ ++
Sbjct: 555 SIEDADLAFSGLP-EKGVVSWSAMIGGLAQHGH---GKRALDVFHRMVDEHISPNHITMT 610
Query: 486 SIYAS---KGKWDHVSQLRRTMRE 506
S+ + G D + +M+E
Sbjct: 611 SVLCACNHAGLVDEAKRYFNSMKE 634
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 128/504 (25%), Positives = 219/504 (43%), Gaps = 69/504 (13%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P H VSW+ L++ ++++ DA+ + M + R + ++ G
Sbjct: 66 PCH--VSWSSLVTAYSNNAMPRDALGAFRSMRSCSV----RCNEFVLPVVLKCAPDAGFG 119
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
Q+H + G G +FV + LV MY G + +A+ FDE
Sbjct: 120 TQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDE------------------- 160
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
+++++SW +++ ++N A+ +F EM G+ ++F F V+
Sbjct: 161 -----------AGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVV 209
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
AC G LE G+++HA +IR + +VF +ALVDMY K I+ A VF + +VV
Sbjct: 210 NACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVV 269
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW A + G +G + A+++ M+ +G+ P+ FTL S++ +CA + G Q HG
Sbjct: 270 SWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFM 329
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ S ++ LV Y K G ++D+ ++F+ + RD V W AL+SG + + E +
Sbjct: 330 VKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEAL 389
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH-----------------------Y 398
LF +M G + TL VL + + + R Y
Sbjct: 390 SLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSY 449
Query: 399 FEIMVKEYGIRPIHDH-------YTCMIDILSRAGRLEEAKSFINKM---PFPPDAIGWA 448
++ Y R H +T MI LS+ E+A +M PD +
Sbjct: 450 WKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLS 509
Query: 449 TLLSSCRIHGNVEIGKWAAESLLE 472
+LL++C E GK L++
Sbjct: 510 SLLNACASLSAYEQGKQVHAHLIK 533
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 189/418 (45%), Gaps = 44/418 (10%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
T +L ++ + + G IH H+LK G + + L+ Y+K L A+R FDE+
Sbjct: 6 TIGPLLTRYAATQSLLQGAHIHAHLLKSGL--FAVFRNHLLSFYSKCRLPGSARRVFDEI 63
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
P D +SW++++T N + R+A+ FR
Sbjct: 64 P-------------------------------DPCHVSWSSLVTAYSNNAMPRDALGAFR 92
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
MR + ++F VL C G Q+HA + ++FV +ALV MY
Sbjct: 93 SMRSCSVRCNEFVLPVVLK-CAPDAGF--GTQLHALAMATGLGGDIFVANALVAMYGGFG 149
Query: 224 SIKYAESVFRTMAW-KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
+ A VF +N VSW ++ Y +N AVK+F M G++P++F V+
Sbjct: 150 FVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVV 209
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
++C LE G + H + TG + +NALV Y K G+I + +F ++ D V
Sbjct: 210 NACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVV 269
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
SW A +SG G ++L +M S GL P+ TL +L AC+ +G GR M
Sbjct: 270 SWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFM 329
Query: 403 VKEYGIRPIHDHYTC--MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
VK D+Y ++D+ ++ G L++AK + +P D + W L+S C HG
Sbjct: 330 VKA---NADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIP-QRDLVLWNALISGCS-HG 382
>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
Length = 617
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 256/650 (39%), Positives = 388/650 (59%), Gaps = 36/650 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW L+SG + + DA+ + M + G+ +R S+ +++
Sbjct: 1 MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAP-TRFALSSAARAAAALGAPLP 59
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+H ++ GF + +FV S L DMY+K GL+
Sbjct: 60 GAQLHCVGVRLGFDTELFVASNLADMYSKCGLL--------------------------- 92
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL-AMDQFTFGS 179
E+ R+F M KD+++WT MI G +NG A+ FR+M+ EGL DQ F S
Sbjct: 93 ----SEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCS 148
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR--TMAW 237
VL+A GGL K IH + + + V V +AL+DMY K ++ A V + W
Sbjct: 149 VLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGW 208
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
NVVS T+M+ GY + C EEA+ I+ ++R G+EP++FT S+I CA A LE+G Q
Sbjct: 209 -NVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQL 267
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H + + T LI V + LV YGKCG I S +LFNE+ R +++W A+++ +A+ G
Sbjct: 268 HAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHG 327
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
E I F++M+ G++P+ + + +L+ACS AGLV++G YF M + +GI P +HY+C
Sbjct: 328 REAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSC 387
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
+ID RAGRL+EA FI++MP P+A GW +LL +CR+ G+ E+G+ AA++L++L+P N
Sbjct: 388 IIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGN 447
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
+V LS IYAS G+W+ V +R+ MR+ ++K PG SW+ + H+F ++DWS P
Sbjct: 448 TGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQ 507
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
IY +LE+L ++ +EGY+PD S + ++E K ++L +HSE++A+AF L+ +P P
Sbjct: 508 KDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKP 567
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
I V KNLR+C DCH A K+I K+ +R+I+VRD RFH F NG CSCGD+W
Sbjct: 568 IIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 617
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 250/646 (38%), Positives = 376/646 (58%), Gaps = 26/646 (4%)
Query: 8 SWNLLISGHASHGSVNDAVKVY-NLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
SW I AS G + A+ ++ + D S + S + + + C LG + G
Sbjct: 21 SWAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTS---LPGALKSCAALGLRALG 77
Query: 67 ---HILKFGFGSYV--FVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
H L G++ F + L+++Y KL P + M + +
Sbjct: 78 ASLHALALRSGAFADRFAANALLNLYCKL----------PAPPSHSPEMDGSAV------ 121
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
++E R++F M +KD +SW T++ G ++G EA+ L REM +G D FT SVL
Sbjct: 122 -VLESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVL 180
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+ G ++H F RN D+VFVGS+L+DMY C Y+ VF + ++ +
Sbjct: 181 PIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAI 240
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
W +ML G QNG +EA+ +F M +GI+P T S+I +C NLASL G Q H
Sbjct: 241 LWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYV 300
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ G + +S++L+ Y KCGN+ + R+F+ + D VSWTA++ G+A G A E +
Sbjct: 301 IRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREAL 360
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
LF++M LKP+ +T + VL+ACS AGLV+KG YF M YGI P +H+ + D
Sbjct: 361 VLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADT 420
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
L R G+LEEA +FI+ M P A W+TLL +C++H N + + A+ + +L+P + S+
Sbjct: 421 LGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSH 480
Query: 482 VLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIY 541
++LS+ Y+S G+W+ + LR++MR+KG++K+P CSWI+ K++ H+F A D S P+ ++I
Sbjct: 481 IILSNTYSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERII 540
Query: 542 AELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVV 601
L + +M+++GYVP+ V D+E +K +L HSEKLAI FG++ PPG IRV+
Sbjct: 541 DALNVFSEQMVRQGYVPNTDDVFQDIEEEQKNSVLCGHSEKLAIVFGIISTPPGTTIRVM 600
Query: 602 KNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCH TK+ISKI REI++RDA RFH FK+G CSCGDFW
Sbjct: 601 KNLRVCVDCHTVTKFISKIVGREIVMRDANRFHHFKDGICSCGDFW 646
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 184/350 (52%), Gaps = 34/350 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN L+ G A G +A+ + M +DG S T S++L + + V
Sbjct: 133 MPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDS-FTLSSVLPIFAEGADVRR 191
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G ++HG + GF VFVGS L+DMYA + + FD LP ++ +++N+M+ G +
Sbjct: 192 GMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQ 251
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G V+ EA+ LFR M G+ TF S+
Sbjct: 252 NGSVD-------------------------------EALGLFRRMLHSGIKPMPVTFSSL 280
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ ACG L +L GKQ+HA++IR NVF+ S+L+DMYCKC ++ A +F + ++
Sbjct: 281 IPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDI 340
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
VSWTAM++G+ +G + EA+ +F M+ ++P+ T +V+++C++ +++G + F+
Sbjct: 341 VSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNS 400
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALV 348
S G++ + AL G+ G +E+++ + M ++ S W+ L+
Sbjct: 401 MSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIKPTASVWSTLL 450
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 237/605 (39%), Positives = 370/605 (61%), Gaps = 33/605 (5%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
++T+L +R + G+++H H++K + V++ + L+ Y K + DA+ FD +P
Sbjct: 61 YNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMP 120
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
E+N+V SWT MI+ Q G +A+ LF +
Sbjct: 121 ERNVV-------------------------------SWTAMISAYSQRGYASQALSLFVQ 149
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M G ++FTF +VLT+C G G+QIH+ II+ +++ +V+VGS+L+DMY K
Sbjct: 150 MLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGK 209
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
I A +F+ + ++VVS TA++ GY Q G EEA+++F +QR G++ + T SV+++
Sbjct: 210 IHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTA 269
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
+ LA+L+ G Q H L + + S++ + N+L+ Y KCGN+ + R+F+ ++ R +SW
Sbjct: 270 LSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISW 329
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
A++ GY+K G+ E ++LF M+ +KPD VT++ VLS CS GL +KG F M
Sbjct: 330 NAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMT 389
Query: 404 K-EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
+ ++P HY C++D+L RAGR+E A F+ KMPF P A W LL +C +H N++I
Sbjct: 390 SGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDI 449
Query: 463 GKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKS 522
G++ LL+++P N +YV+LS++YAS G+W+ V LR M +K V K+PG SWI+
Sbjct: 450 GEFVGHQLLQIEPENAGNYVILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIELDQ 509
Query: 523 RVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEK 582
+H F A D S P +++ A++++L+ + + GYVPD+S VLHDV+ +K K+L HSEK
Sbjct: 510 VLHTFHASDCSHPRREEVSAKVQELSARFKEAGYVPDLSCVLHDVDEEQKEKILLSHSEK 569
Query: 583 LAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECS 642
LA+ FGL+ P +PIRV+KNLR+C DCHN KY SKI RE+ +RD RFH G+CS
Sbjct: 570 LALTFGLIATPESVPIRVIKNLRICVDCHNFAKYTSKIYGREVSLRDKNRFHRIVGGKCS 629
Query: 643 CGDFW 647
CGD+W
Sbjct: 630 CGDYW 634
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/340 (32%), Positives = 180/340 (52%), Gaps = 37/340 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW +IS ++ G + A+ ++ ML+ G + TF+T+L L
Sbjct: 119 MPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGT-EPNEFTFATVLTSCIGSSGFVL 177
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQIH HI+K + ++V+VGS L+DMYAK G I++A+ F LPE+++V +I+G +
Sbjct: 178 GRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQ 237
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL EE+ LF R ++ EG+ + T+ SV
Sbjct: 238 LGLDEEALELF-------------------------------RRLQREGMQSNYVTYTSV 266
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LTA GL AL+ GKQ+H ++R++ V + ++L+DMY KC ++ YA +F T+ + V
Sbjct: 267 LTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTV 326
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+SW AMLVGY ++G E +++F M N ++PD T+ +V+S C++ LE+
Sbjct: 327 ISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSH-GGLEDKGMDIF 385
Query: 300 RSLVTGLISFITVSN---ALVTFYGKCGNIEDSHRLFNEM 336
+ +G IS S +V G+ G +E + +M
Sbjct: 386 YDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKM 425
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 157/307 (51%), Gaps = 13/307 (4%)
Query: 156 REAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSAL 215
REA+ M L GL + + +VL C A+ EG+++HA +I+ + V++ + L
Sbjct: 43 REAL---LHMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRL 99
Query: 216 VDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDD 275
+ Y KC S++ A VF M +NVVSWTAM+ Y Q G + +A+ +F M R+G EP++
Sbjct: 100 IVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNE 159
Query: 276 FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNE 335
FT +V++SC + G Q H + + + V ++L+ Y K G I ++ +F
Sbjct: 160 FTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQC 219
Query: 336 MNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG 395
+ RD VS TA++SGYA+ G E ++LF ++ G++ + VT VL+A S ++ G
Sbjct: 220 LPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHG 279
Query: 396 R----HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
+ H V Y + +ID+ S+ G L A+ + + I W +L
Sbjct: 280 KQVHNHLLRSEVPSYVVLQ-----NSLIDMYSKCGNLTYARRIFDTL-HERTVISWNAML 333
Query: 452 SSCRIHG 458
HG
Sbjct: 334 VGYSKHG 340
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 243/605 (40%), Positives = 368/605 (60%), Gaps = 33/605 (5%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
+ T+L S+R + G+++H H++K + V++ + L+ +Y K + DA+ FDE+P
Sbjct: 93 YDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMP 152
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
+KN+ +SWT MI+ Q G EA++LF E
Sbjct: 153 QKNV-------------------------------VSWTAMISAYSQRGFAFEALNLFVE 181
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M + FTF ++LT+C G L E G+QIH+ I+ +++ ++FVGS+L+DMY K
Sbjct: 182 MLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGR 241
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
I A VF + ++VV+ TA++ GY Q G EEA+K+F +Q G+ + T SV+++
Sbjct: 242 ICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTA 301
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
+ LA+L G Q H L +G S++ + N+L+ Y KCGN+ + R+F+ M R +SW
Sbjct: 302 LSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISW 361
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
A++ GY+K G A E ++LF+ M +KPD +T + VLS CS L + G F MV
Sbjct: 362 NAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMV 421
Query: 404 K-EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
+ GI P HY C++D+L RAGR+EEA FI KMPF P A W +LL SCR+H +VEI
Sbjct: 422 NGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEI 481
Query: 463 GKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKS 522
G + LLEL+P N +YV+LS++YAS GKW+ + +R M+EK V K+PG SW++
Sbjct: 482 GIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQ 541
Query: 523 RVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEK 582
VH F A D + P +++ ++++L+ K ++GYVPD+S VL+DV+ +K K+L HSEK
Sbjct: 542 IVHTFHASDHTHPRREEVAKKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEK 601
Query: 583 LAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECS 642
LA+AFGL+ P G IRV+KNLR+C DCH+ K++S++ R +++RD RFH G CS
Sbjct: 602 LALAFGLIATPEGTTIRVIKNLRICVDCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCS 661
Query: 643 CGDFW 647
CGD+W
Sbjct: 662 CGDYW 666
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 112/200 (56%), Gaps = 8/200 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D V+ +ISG+A G +A+K++ + +G+ N + +T++++L S ++
Sbjct: 252 LPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGM-NSNSVTYASVLTALSGLAALNH 310
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H H+L+ G SYV + + L+DMY+K G + A+R FD +PE+ + +N M+ G +
Sbjct: 311 GKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSK 370
Query: 121 RGLVEESRRLFRGMKDK-----DSISWTTMITGLMQNGLEREAIDLFREMR--LEGLAMD 173
G+ E LF+ M+++ DSI++ +++G LE +++F M +G+ D
Sbjct: 371 HGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPD 430
Query: 174 QFTFGSVLTACGGLLALEEG 193
+G V+ G +EE
Sbjct: 431 IGHYGCVVDLLGRAGRVEEA 450
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 253/645 (39%), Positives = 370/645 (57%), Gaps = 38/645 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLK----DGLGNLSRITFSTMLIMSSSRRCVDLGR 62
VSWN +I G+A D + + L+ K D T +L + R + +
Sbjct: 271 VSWNSMIGGYARE---EDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLK 327
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
++HG+ + G S N ++ N I R G
Sbjct: 328 ELHGYSWRHGLQS-------------------------------NELVANAFIAAYTRCG 356
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
+ S R+F M K SW ++ G QN R+A+DL+ +M GL D FT GS+L
Sbjct: 357 ALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLL 416
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
AC + +L G++IH F +RN + F+G +L+ +Y C A+ +F M +++VS
Sbjct: 417 ACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVS 476
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL 302
W M+ GY QNG +EA+ +F M +GI+P + + V +C+ L++L G + H +L
Sbjct: 477 WNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFAL 536
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
L I VS++++ Y K G I S R+F+ + +D SW +++GY G+ E ++
Sbjct: 537 KAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALE 596
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL 422
LFEKML GLKPD+ T G+L ACS AGLVE G YF M+ + I P +HYTC++D+L
Sbjct: 597 LFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDML 656
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYV 482
RAGR+++A I +MP PD+ W++LLSSCRIHGN+ +G+ A LLEL+P P +YV
Sbjct: 657 GRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYV 716
Query: 483 LLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYA 542
L+S+++A GKWD V ++R M++ G++KD GCSWI+ +VH F D P +++
Sbjct: 717 LISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRE 776
Query: 543 ELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVK 602
+L K+ GY PD SVLHD+E +KI +L HSEKLAI+FGLL GLP+RV K
Sbjct: 777 TWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYK 836
Query: 603 NLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
NLR+C DCHNA K+ISK+ R+I+VRD RFH F++G CSCGD+W
Sbjct: 837 NLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 881
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 133/474 (28%), Positives = 232/474 (48%), Gaps = 45/474 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRI----TFSTMLIMSSSRR 56
MP + VSWN +I G + +G + ++ + ML +G S + T T+L + +
Sbjct: 162 MPERNLVSWNSIICGFSENGFLQESFNAFREML---VGEESFVPDVATLVTVLPVCAGEE 218
Query: 57 CVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMIT 116
++ G +HG +K G + V + L+DMY+K + +A+ FD+ +KNIV
Sbjct: 219 DIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIV------- 271
Query: 117 GLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM--DQ 174
SW +MI G + L ++M+ E M D+
Sbjct: 272 ------------------------SWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADE 307
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
FT +VL C L+ K++H + R+ + N V +A + Y +C ++ +E VF
Sbjct: 308 FTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDL 367
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
M K V SW A+L GY QN +A+ ++ M +G++PD FT+GS++ +C+ + SL G
Sbjct: 368 MDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYG 427
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
+ HG +L GL + +L++ Y CG + LF+ M R VSW +++GY++
Sbjct: 428 EEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQN 487
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G +E I+LF +MLS G++P E+ ++ V ACS+ + G+ +K + I
Sbjct: 488 GLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVS 547
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
+ +ID+ ++ G + ++ +++ D W +++ IHG GK A E
Sbjct: 548 -SSIIDMYAKGGCIGLSQRIFDRLR-EKDVASWNVIIAGYGIHGR---GKEALE 596
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 192/398 (48%), Gaps = 41/398 (10%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
WN ++S + + DA+ +++ ++ T ++ + + LG+ IHG
Sbjct: 67 QWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGM 126
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
K S VFVG+ L+ MY K GL+ +A + F+ +PE+N+V +N++I G G ++ES
Sbjct: 127 ATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQES 186
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
FR M+ G E D T +VL C G
Sbjct: 187 FNAFR-----------EMLVG------------------EESFVPDVATLVTVLPVCAGE 217
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
+E+G +H ++ + + V ++L+DMY KC+ + A+ +F KN+VSW +M+
Sbjct: 218 EDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMI 277
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIE-----PDDFTLGSVISSCANLASLEEGTQFHGRSL 302
GY + E+ + F +Q+ E D+FT+ +V+ C + L+ + HG S
Sbjct: 278 GGYAR---EEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSW 334
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
GL S V+NA + Y +CG + S R+F+ M+ + SW AL+ GYA+ + +D
Sbjct: 335 RHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALD 394
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
L+ +M GL PD T+ +L ACSR K HY E
Sbjct: 395 LYLQMTDSGLDPDWFTIGSLLLACSRM----KSLHYGE 428
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 151/285 (52%), Gaps = 5/285 (1%)
Query: 107 NIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM- 165
+ V+ +IT G +SR +F ++ K+ W +++ +N L +A+ +F E+
Sbjct: 33 DFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELI 92
Query: 166 RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI 225
+ D FT V+ AC GLL L G+ IH + D +VFVG+AL+ MY KC +
Sbjct: 93 SVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLV 152
Query: 226 KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM--QRNGIEPDDFTLGSVIS 283
+ A VF M +N+VSW +++ G+ +NG +E+ F M PD TL +V+
Sbjct: 153 EEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLP 212
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
CA +E+G HG ++ GL + V+N+L+ Y KC + ++ LF++ + ++ VS
Sbjct: 213 VCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVS 272
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHG--LKPDEVTLIGVLSAC 386
W +++ GYA+ T L +KM + +K DE T++ VL C
Sbjct: 273 WNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVC 317
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 136/265 (51%), Gaps = 5/265 (1%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFV-GSALVDMYCKCKSIKYAESVFRTM 235
G +L ACG +E G+++H + + N FV + ++ MY C S + VF +
Sbjct: 1 MGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKL 60
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEG 294
KN+ W A++ Y +N E+A+ IF + +PD+FTL VI +CA L L G
Sbjct: 61 RRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLG 120
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
HG + L+S + V NAL+ YGKCG +E++ ++F M R+ VSW +++ G+++
Sbjct: 121 QIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSEN 180
Query: 355 GKANETIDLFEKML--SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
G E+ + F +ML PD TL+ VL C+ +EKG + VK G+
Sbjct: 181 GFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVK-LGLNEEL 239
Query: 413 DHYTCMIDILSRAGRLEEAKSFINK 437
+ID+ S+ L EA+ +K
Sbjct: 240 MVNNSLIDMYSKCRFLSEAQLLFDK 264
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D SWN++I+G+ HG +A++++ ML+ GL TF+ +L+ S V+ G +
Sbjct: 574 DVASWNVIIAGYGIHGRGKEALELFEKMLRLGL-KPDDFTFTGILMACSHAGLVEDGLEY 632
Query: 65 HGHILKF-GFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
+L + + +VDM + G I DA R +E+P
Sbjct: 633 FNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMP 673
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 243/679 (35%), Positives = 395/679 (58%), Gaps = 75/679 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN+++S + G V +A+ + M G+ L T+++ L + +
Sbjct: 230 MPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGV-RLDSTTYTSSLTACARLSSLRW 288
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H +++ +V S LV++YAK G
Sbjct: 289 GKQLHAQVIRNLPCIDPYVASALVELYAKCGCF--------------------------- 321
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+E++ +F + D+++++WT +I G +Q+G E+++LF +MR E + +DQF ++
Sbjct: 322 ----KEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATL 377
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM----- 235
++ C + L G+Q+H+ +++ V V ++L+ MY KC +++ AES+FR M
Sbjct: 378 ISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDI 437
Query: 236 -AW-------------------------KNVVSWTAMLVGYGQNGCSEEAVKIFCNM-QR 268
+W KNV++W AML Y Q+G E+ ++++ M
Sbjct: 438 VSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSE 497
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIED 328
+ PD T ++ CA+L + + G Q GR++ GLI +V+NA++T Y KCG I +
Sbjct: 498 KDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILE 557
Query: 329 SHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
+ ++F+ +NV+D VSW A+++GY++ G + I++F+ +L G KPD ++ + VLS CS
Sbjct: 558 ARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSH 617
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
+GLV++G+ YF++M + + I P +H++CM+D+L RAG L EAK I++MP P A W
Sbjct: 618 SGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWG 677
Query: 449 TLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
LLS+C+IHGN E+ + AA+ + ELD + SY+L++ IYA GK D +Q+R+ MR+KG
Sbjct: 678 ALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKG 737
Query: 509 VRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVE 568
++K+PG SW++ ++VH+F ADD S P I +L++L K+ + GYV D
Sbjct: 738 IKKNPGYSWMEVNNKVHVFKADDVSHPQVIAIRKKLDELMEKIARLGYVRT------DSP 791
Query: 569 LSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVR 628
SE HHSEKLA+AFGL+ +P +PI ++KNLR+C DCH K IS +T RE ++R
Sbjct: 792 RSEI-----HHSEKLAVAFGLMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTGREFVIR 846
Query: 629 DAVRFHLFKNGECSCGDFW 647
DAVRFH F G CSCGD+W
Sbjct: 847 DAVRFHHFNGGSCSCGDYW 865
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 133/410 (32%), Positives = 225/410 (54%), Gaps = 4/410 (0%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SWN L+SG+ +++ + M + G + + TF+ + + L
Sbjct: 97 MPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSL 156
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
Q+ G + KFG V + LVDM+ + G + A R F + E I N+M+ G ++
Sbjct: 157 ALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVK 216
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
V+ + LF M ++D +SW M++ L Q+G REA+D+ +M+ +G+ +D T+ S
Sbjct: 217 TYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSS 276
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LTAC L +L GKQ+HA +IRN + +V SALV++Y KC K A+ VF ++ +N
Sbjct: 277 LTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNN 336
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+WT ++ G+ Q+GC E+V++F M+ + D F L ++IS C + L G Q H
Sbjct: 337 VAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSL 396
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
L +G I + VSN+L++ Y KC N++ + +F MN +D VSWT++++ +++ G +
Sbjct: 397 CLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKA 456
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP 410
+ F+ M + + +T +L A + G E G + +M+ E +RP
Sbjct: 457 REFFDGMSTKNV----ITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRP 502
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 131/533 (24%), Positives = 245/533 (45%), Gaps = 55/533 (10%)
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF-DELPEKNIVMYNTMITGLLRRGL 123
HG ++ G S VF+ + L+ Y G + DA+R ++ N++ +N M+ G ++ G
Sbjct: 27 HGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDIAHPNVITHNVMLNGYVKLGR 86
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG-LAMDQFTFGSVLT 182
+ ++ LF M +D SW T+++G Q+ +++ F M G + + FTF +
Sbjct: 87 LSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMK 146
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS------------------ 224
+CG L Q+ + + +D+ V +ALVDM+ +C +
Sbjct: 147 SCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFC 206
Query: 225 -------------IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGI 271
+ +A +F +M ++VVSW M+ Q+G EA+ + +MQ G+
Sbjct: 207 RNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGV 266
Query: 272 EPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHR 331
D T S +++CA L+SL G Q H + + V++ALV Y KCG +++
Sbjct: 267 RLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKG 326
Query: 332 LFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGL 391
+FN ++ R+ V+WT L++G+ + G E+++LF +M + + D+ L ++S C
Sbjct: 327 VFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMD 386
Query: 392 VEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
+ GR + +K I+ + + +I + ++ L+ A+S M D + W +++
Sbjct: 387 LCLGRQLHSLCLKSGQIQAVVVSNS-LISMYAKCDNLQSAESIFRFMN-EKDIVSWTSMI 444
Query: 452 SSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKG-KWDHVSQLRRTMREKGVR 510
++ GN+ + E + N ++ + Y G + D + + EK VR
Sbjct: 445 TAHSQVGNIAKAR---EFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVR 501
Query: 511 KDPGCSWIKYKSRVHIFS--ADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMS 561
D W+ Y V +F AD ++ DQI + +K G + D S
Sbjct: 502 PD----WVTY---VTLFKGCADLGANKLGDQIIG-------RTVKVGLILDTS 540
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 235/602 (39%), Positives = 363/602 (60%), Gaps = 40/602 (6%)
Query: 81 SPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSI 140
+ L+ A+ G I DA+ F+++PE +V +N +ITG ++ G+V E++ LF M +++I
Sbjct: 326 TALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTI 385
Query: 141 SWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFI 200
SW MI G QNG EA+ L +E+ G+ + S+ AC ++ALE G Q+H+
Sbjct: 386 SWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLA 445
Query: 201 IRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAV 260
++ + N F +AL+ MY KC++++YA VF M K++VSW + L QN +EA
Sbjct: 446 VKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEAR 505
Query: 261 KIFCNMQRNGIEPDDFTLGSVISS-----------------------------------C 285
F NM + DD + ++IS+ C
Sbjct: 506 NTFDNM----LSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVC 561
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
+L + + G Q H ++ G+ S + V+NAL++ Y KCG DS R+F+ M RD +W
Sbjct: 562 GSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADSRRIFDLMEERDIFTWN 620
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE 405
+++GYA+ G E I +++ M S G+ P+EVT +G+L+ACS AGLV++G +F+ M ++
Sbjct: 621 TIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQD 680
Query: 406 YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKW 465
YG+ P+ +HY CM+D+L R G ++ A+ FI MP PD + W+ LL +C+IH N EIGK
Sbjct: 681 YGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKR 740
Query: 466 AAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVH 525
AAE L ++P N +YV+LS+IY+S G W V+++R+ M+++GV K+PGCSW + K ++H
Sbjct: 741 AAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMH 800
Query: 526 IFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAI 585
F D ++I A LE+L + GYVPD VLHD++ +K L +HSEKLA+
Sbjct: 801 SFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAV 860
Query: 586 AFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGD 645
A+ LL P G+PI+++KNLR+C DCH K++S +T+R+I +RD RFH F+NG CSC D
Sbjct: 861 AYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCED 920
Query: 646 FW 647
FW
Sbjct: 921 FW 922
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/459 (25%), Positives = 227/459 (49%), Gaps = 30/459 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D ++WN +IS + +G + A +Y+ + GN+ + +++S R L
Sbjct: 60 MPRRDIIAWNSMISAYCHNGMPDAARDLYDAISG---GNMR----TGAILLSGYGR---L 109
Query: 61 GRQIHGHILKFGFGSYVFVG-SPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
GR + + G V + ++ Y + G I A+R FD +P +++ +N+M+TG
Sbjct: 110 GRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYC 169
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ ++R LF M +++ +SWT MI+G + +A D+F +M EGL DQ F S
Sbjct: 170 HSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFAS 229
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI-KYAESVFRTMAWK 238
L+A GL L+ + + ++ + +V +G+A++++Y + S+ A F +M +
Sbjct: 230 ALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIER 289
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE-GTQF 297
N +W+ M+ G + A+ ++ +R+ ++ S+ A + L + G
Sbjct: 290 NEYTWSTMIAALSHGGRIDAAIAVY---ERDPVK-------SIACRTALITGLAQCGRID 339
Query: 298 HGRSLVTGLISFITVS-NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
R L + I VS NAL+T Y + G + ++ LF++M R+ +SW +++GYA+ G+
Sbjct: 340 DARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGR 399
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
+ E + L +++ G+ P +L + ACS +E G + VK + + +
Sbjct: 400 SEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVK---VGCQFNSFA 456
Query: 417 C--MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
C +I + + +E A+ ++M D + W + L++
Sbjct: 457 CNALITMYGKCRNMEYARQVFSRM-VTKDIVSWNSFLAA 494
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 165/376 (43%), Gaps = 44/376 (11%)
Query: 115 ITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
I L R G V E+R +F M +D I+W +MI+ NG+ A DL+ + ++
Sbjct: 41 IRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLY-----DAISGGN 95
Query: 175 FTFGSVLTACGGLLA--LEEGKQIHAFIIRNDHKDNVFVG-------------------- 212
G++L + G L LE + + RN N +
Sbjct: 96 MRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPS 155
Query: 213 ------SALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM 266
++++ YC + A ++F M +N+VSWT M+ GYG+ +A IFC M
Sbjct: 156 RDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKM 215
Query: 267 QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
R G+ PD S +S+ L +L+ +L TG + + A++ Y + ++
Sbjct: 216 HREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSV 275
Query: 327 EDSH-RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
D+ + F M R+E +W+ +++ + G+ + I ++E+ + LI L+
Sbjct: 276 LDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIAC-RTALITGLAQ 334
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
C R ++ R FE + + PI + +I + G + EAK +KMPF + I
Sbjct: 335 CGR---IDDARILFEQIPE-----PIVVSWNALITGYMQNGMVNEAKELFDKMPF-RNTI 385
Query: 446 GWATLLSSCRIHGNVE 461
WA +++ +G E
Sbjct: 386 SWAGMIAGYAQNGRSE 401
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 85/170 (50%), Gaps = 8/170 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLML-KDGLGNLSRITFSTMLIMSSSRRCVD 59
M D VSW +IS +A N+A+ + M + L N +T +L + S
Sbjct: 511 MLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTI--LLGVCGSLGASK 568
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+G+QIH +K G S + V + L+ MY K G D++R FD + E++I +NT+ITG
Sbjct: 569 IGQQIHTVAIKLGMDSELIVANALISMYFKCGCA-DSRRIFDLMEERDIFTWNTIITGYA 627
Query: 120 RRGLVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREM 165
+ GL E+ ++++ M+ + +++ ++ GL E F+ M
Sbjct: 628 QHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSM 677
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 28/211 (13%)
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
HG V+G +A + G+ G + ++ +F+ M RD ++W +++S Y G
Sbjct: 29 HGELEVSG-------CSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMP 81
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
+ DL++ + ++ + +LS R G V + R F+ M++ + +
Sbjct: 82 DAARDLYDAISGGNMRTGAI----LLSGYGRLGRVLEARRVFDGMLERNTVA-----WNA 132
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS-CRIHGNVEIGKWAAESLLELDP- 475
MI + G + A+ + MP D W ++L+ C V+ A +L E P
Sbjct: 133 MISCYVQNGDITMARRLFDAMP-SRDVSSWNSMLTGYCHSLQMVD-----ARNLFEKMPE 186
Query: 476 YNPASYVLLSSIYA---SKGK-WDHVSQLRR 502
N S+ ++ S Y + GK WD ++ R
Sbjct: 187 RNLVSWTVMISGYGRIENHGKAWDIFCKMHR 217
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 235/602 (39%), Positives = 363/602 (60%), Gaps = 40/602 (6%)
Query: 81 SPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSI 140
+ L+ A+ G I DA+ F+++PE +V +N +ITG ++ G+V E++ LF M +++I
Sbjct: 326 TALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTI 385
Query: 141 SWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFI 200
SW MI G QNG EA+ L +E+ G+ + S+ AC ++ALE G Q+H+
Sbjct: 386 SWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLA 445
Query: 201 IRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAV 260
++ + N F +AL+ MY KC++++YA VF M K++VSW + L QN +EA
Sbjct: 446 VKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEAR 505
Query: 261 KIFCNMQRNGIEPDDFTLGSVISS-----------------------------------C 285
F NM + DD + ++IS+ C
Sbjct: 506 NTFDNM----LSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVC 561
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
+L + + G Q H ++ G+ S + V+NAL++ Y KCG DS R+F+ M RD +W
Sbjct: 562 GSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADSRRIFDLMEERDIFTWN 620
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE 405
+++GYA+ G E I +++ M S G+ P+EVT +G+L+ACS AGLV++G +F+ M ++
Sbjct: 621 TIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQD 680
Query: 406 YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKW 465
YG+ P+ +HY CM+D+L R G ++ A+ FI MP PD + W+ LL +C+IH N EIGK
Sbjct: 681 YGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKR 740
Query: 466 AAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVH 525
AAE L ++P N +YV+LS+IY+S G W V+++R+ M+++GV K+PGCSW + K ++H
Sbjct: 741 AAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMH 800
Query: 526 IFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAI 585
F D ++I A LE+L + GYVPD VLHD++ +K L +HSEKLA+
Sbjct: 801 SFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAV 860
Query: 586 AFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGD 645
A+ LL P G+PI+++KNLR+C DCH K++S +T+R+I +RD RFH F+NG CSC D
Sbjct: 861 AYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCED 920
Query: 646 FW 647
FW
Sbjct: 921 FW 922
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/459 (25%), Positives = 227/459 (49%), Gaps = 30/459 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D ++WN +IS + +G + A +Y+ + GN+ + +++S R L
Sbjct: 60 MPRRDIIAWNSMISAYCHNGMPDAARDLYDAISG---GNMR----TGAILLSGYGR---L 109
Query: 61 GRQIHGHILKFGFGSYVFVG-SPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
GR + + G V + ++ Y + G I A+R FD +P +++ +N+M+TG
Sbjct: 110 GRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYC 169
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ ++R LF M +++ +SWT MI+G + +A D+F +M EGL DQ F S
Sbjct: 170 HSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFAS 229
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI-KYAESVFRTMAWK 238
L+A GL L+ + + ++ + +V +G+A++++Y + S+ A F +M +
Sbjct: 230 ALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIER 289
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE-GTQF 297
N +W+ M+ G + A+ ++ +R+ ++ S+ A + L + G
Sbjct: 290 NEYTWSTMIAALSHGGRIDAAIAVY---ERDPVK-------SIACRTALITGLAQCGRID 339
Query: 298 HGRSLVTGLISFITVS-NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
R L + I VS NAL+T Y + G + ++ LF++M R+ +SW +++GYA+ G+
Sbjct: 340 DARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGR 399
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
+ E + L +++ G+ P +L + ACS +E G + VK + + +
Sbjct: 400 SEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVK---VGCQFNSFA 456
Query: 417 C--MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
C +I + + +E A+ ++M D + W + L++
Sbjct: 457 CNALITMYGKCRNMEYARQVFSRM-VTKDIVSWNSFLAA 494
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 165/376 (43%), Gaps = 44/376 (11%)
Query: 115 ITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
I L R G V E+R +F M +D I+W +MI+ NG+ A DL+ + ++
Sbjct: 41 IRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLY-----DAISGGN 95
Query: 175 FTFGSVLTACGGLLA--LEEGKQIHAFIIRNDHKDNVFVG-------------------- 212
G++L + G L LE + + RN N +
Sbjct: 96 MRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPS 155
Query: 213 ------SALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM 266
++++ YC + A ++F M +N+VSWT M+ GYG+ +A IFC M
Sbjct: 156 RDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKM 215
Query: 267 QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
R G+ PD S +S+ L +L+ +L TG + + A++ Y + ++
Sbjct: 216 HREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSV 275
Query: 327 EDSH-RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
D+ + F M R+E +W+ +++ + G+ + I ++E+ + LI L+
Sbjct: 276 LDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIAC-RTALITGLAQ 334
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
C R ++ R FE + + PI + +I + G + EAK +KMPF + I
Sbjct: 335 CGR---IDDARILFEQIPE-----PIVVSWNALITGYMQNGMVNEAKELFDKMPF-RNTI 385
Query: 446 GWATLLSSCRIHGNVE 461
WA +++ +G E
Sbjct: 386 SWAGMIAGYAQNGRSE 401
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 85/170 (50%), Gaps = 8/170 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLML-KDGLGNLSRITFSTMLIMSSSRRCVD 59
M D VSW +IS +A N+A+ + M + L N +T +L + S
Sbjct: 511 MLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTI--LLGVCGSLGASK 568
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+G+QIH +K G S + V + L+ MY K G D++R FD + E++I +NT+ITG
Sbjct: 569 IGQQIHTVAIKLGMDSELIVANALISMYFKCGCA-DSRRIFDLMEERDIFTWNTIITGYA 627
Query: 120 RRGLVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREM 165
+ GL E+ ++++ M+ + +++ ++ GL E F+ M
Sbjct: 628 QHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSM 677
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 84/188 (44%), Gaps = 21/188 (11%)
Query: 321 GKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLI 380
G+ G + ++ +F+ M RD ++W +++S Y G + DL++ + ++ +
Sbjct: 45 GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAI--- 101
Query: 381 GVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF 440
+LS R G V + R F+ M++ + + MI + G + A+ + MP
Sbjct: 102 -LLSGYGRLGRVLEARRVFDGMLERNTVA-----WNAMISCYVQNGDITMARRLFDAMP- 154
Query: 441 PPDAIGWATLLSS-CRIHGNVEIGKWAAESLLELDP-YNPASYVLLSSIYA---SKGK-W 494
D W ++L+ C V+ A +L E P N S+ ++ S Y + GK W
Sbjct: 155 SRDVSSWNSMLTGYCHSLQMVD-----ARNLFEKMPERNLVSWTVMISGYGRIENHGKAW 209
Query: 495 DHVSQLRR 502
D ++ R
Sbjct: 210 DIFCKMHR 217
>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Brachypodium distachyon]
Length = 647
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 234/592 (39%), Positives = 367/592 (61%)
Query: 56 RCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
R + L RQ+H G + F + L+ YA LG + A+ F+ + ++N++ +N +I
Sbjct: 56 RAIPLLRQLHAFAATSGAAADRFTTNNLLLAYADLGDLPTARHLFEGISKRNVMSWNILI 115
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
G ++ G + +R LF M ++ +W M+ GL GL+ +++ F MR EG+ D+F
Sbjct: 116 GGCIKNGDLGSARELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEF 175
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
GSV C GLL + G+Q+HA+++R+ ++ VG++L MY +C + E+V R +
Sbjct: 176 GLGSVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRAL 235
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
+VS+ + G QNG SE A++ F M+ + PD T S IS C++LA+L +G
Sbjct: 236 PSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQGQ 295
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
Q H + + G+ + V +LV Y +CG + DS R+++ D +A++S G
Sbjct: 296 QVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSAMISACGFHG 355
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
+ ++ ++LF++M++ G +P+EVT + +L ACS +GL ++G +FE+M K YG +P HY
Sbjct: 356 QGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMTKTYGFQPSVKHY 415
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
C++D+L R+G L+EA++ I MP D + W TLLS+C+ N ++ + AE ++E DP
Sbjct: 416 NCIVDLLGRSGCLDEAEALILSMPVRADGVIWKTLLSACKTQKNFDMAERIAERVIESDP 475
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSP 535
+ A YVLLS+I A+ +W V+++R+ MREK +RK+PG SW+++K +VH F D S P
Sbjct: 476 RDSAPYVLLSNIRATSKRWGDVTEVRKIMREKDIRKEPGVSWVEHKGQVHQFCTGDKSHP 535
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
+I L+++ K+ + GY PDM+ V HD+E EK L HHSEKLAIAF L +P G
Sbjct: 536 RQGEIDEYLKEMMGKIRQCGYAPDMTMVFHDMEDEEKEVSLTHHSEKLAIAFAFLNLPEG 595
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+PIRV+KNLRVC DCH A K IS++T REI+VRD RFH F++G CSCGD+W
Sbjct: 596 VPIRVMKNLRVCDDCHVAIKLISQVTGREIVVRDVSRFHHFRDGRCSCGDYW 647
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 176/403 (43%), Gaps = 71/403 (17%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLM----------LKDGLGNLSRITFSTMLIMSSSR- 55
+SWN+LI G +G + A ++++ M + GL N+ S ++ R
Sbjct: 109 MSWNILIGGCIKNGDLGSARELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRRE 168
Query: 56 -------------RC------VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDA 96
RC V GRQ+H ++++ G S + VG+ L MY + G + +
Sbjct: 169 GMHPDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEG 228
Query: 97 KRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLER 156
+ LP IV +N T I G QNG
Sbjct: 229 EAVLRALPSLTIVSFN-------------------------------TTIAGRTQNGDSE 257
Query: 157 EAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALV 216
A++ F MR +A D TF S ++ C L AL +G+Q+HA +I+ V V ++LV
Sbjct: 258 GALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQGQQVHAQVIKAGVDKVVPVITSLV 317
Query: 217 DMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDF 276
MY +C + +E V+ ++ +AM+ G +G +AV++F M G EP++
Sbjct: 318 HMYSRCGCLGDSERVYDGYCGLDLFLLSAMISACGFHGQGHKAVELFKQMMNGGAEPNEV 377
Query: 277 TLGSVISSCANLASLEEGTQFHGRSLVTGLISF---ITVSNALVTFYGKCGNIEDSHRLF 333
T +++ +C++ +EG +F L+T F + N +V G+ G ++++ L
Sbjct: 378 TFLALLYACSHSGLKDEGLEFF--ELMTKTYGFQPSVKHYNCIVDLLGRSGCLDEAEALI 435
Query: 334 NEMNVR-DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPD 375
M VR D V W L+S K + D+ E++ ++ D
Sbjct: 436 LSMPVRADGVIWKTLLSAC----KTQKNFDMAERIAERVIESD 474
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 256/616 (41%), Positives = 372/616 (60%), Gaps = 19/616 (3%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLML-KDGLGNLSRITFSTMLIMSSSRRCVD 59
MP D V++N++IS HA+HG V+ A ++L KD ++++ ML V+
Sbjct: 126 MPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDA------VSWNGMLAAYVRNGRVE 179
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
R + ++ S+ + L+ Y + G + +A+ FD +P +++V +N M++G
Sbjct: 180 EARGLFNSRTEWDVISW----NALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYA 235
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
RRG + E+RRLF +D +WT +++G QNG+ EA +F M + ++ +
Sbjct: 236 RRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNA 291
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
++ A ++E K++ + NV + ++ Y + ++ A++VF TM K+
Sbjct: 292 MVAAYIQRRMMDEAKELFNMMPCR----NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKD 347
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VSW AML Y Q GCSEE +++F M R G + V+S+CA++A+LE G Q HG
Sbjct: 348 AVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHG 407
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
R + G V NAL+ Y KCGN+ED+ F EM RD VSW +++GYA+ G E
Sbjct: 408 RLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKE 467
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+++F+ M + KPD++TL+GVL+ACS +GLVEKG YF M ++G+ +HYTCMI
Sbjct: 468 ALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMI 527
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L RAGRL EA + MPF PD+ W LL + RIH N E+G+ AAE + EL+P N
Sbjct: 528 DLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAG 587
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
YVLLS+IYAS GKW ++R M E+GV+K PG SWI+ +++VH FSA D P ++
Sbjct: 588 MYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEK 647
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IYA LE L+ +M K GYV VLHDVE EK ML +HSEKLA+A+G+L IPPG PIR
Sbjct: 648 IYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIR 707
Query: 600 VVKNLRVCSDCHNATK 615
V+KNLRVC DCHNA K
Sbjct: 708 VIKNLRVCGDCHNAFK 723
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 215/461 (46%), Gaps = 34/461 (7%)
Query: 10 NLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHIL 69
N I+ H G V DA +++ M + S T++ ML S+ + L + I
Sbjct: 42 NKAITAHMRAGRVADAERLFAAMPRR-----STSTYNAMLAGYSANGRLPLAASLFRAIP 96
Query: 70 KFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRR 129
+ SY + L+ A + DA+ FDE+P ++ V YN MI+ GLV +R
Sbjct: 97 RPDNYSY----NTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARH 152
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
F +KD++SW M+ ++NG EA LF R E D ++ ++++
Sbjct: 153 YFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNS-RTE---WDVISWNALMSGYVQWGK 208
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
+ E +++ + D V + +V Y + + A +F ++V +WTA++ G
Sbjct: 209 MSEARELFDRMPGRD----VVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSG 264
Query: 250 YGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
Y QNG EEA ++F M +RN + + +++++ ++E + + S
Sbjct: 265 YAQNGMLEEARRVFDAMPERNAV-----SWNAMVAAYIQRRMMDEAKELFNMMPCRNVAS 319
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
+ N ++T Y + G +E++ +F+ M +D VSW A+++ Y++ G + ET+ LF +M
Sbjct: 320 W----NTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMG 375
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE-YGIRPIHDHYTCMIDILSRAGR 427
G + VLS C+ +E G +++ YG+ + ++ + + G
Sbjct: 376 RCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGN--ALLAMYFKCGN 433
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
+E+A++ +M D + W T+++ HG GK A E
Sbjct: 434 MEDARNAFEEME-ERDVVSWNTMIAGYARHG---FGKEALE 470
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 164/352 (46%), Gaps = 32/352 (9%)
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
E ++ N IT +R G V ++ RLF M + + ++ M+ G NG A LFR
Sbjct: 35 EPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRA 94
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQI-HAFIIRNDHKDNVFVGSALVDMYCKCK 223
+ D +++ ++L A +L + + + +R+ NV + S +
Sbjct: 95 IPRP----DNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISS-----HANHG 145
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
+ A F K+ VSW ML Y +NG EEA +F + E D + +++S
Sbjct: 146 LVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF----NSRTEWDVISWNALMS 201
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+ E + R ++S+ N +V+ Y + G++ ++ RLF+ VRD +
Sbjct: 202 GYVQWGKMSEARELFDRMPGRDVVSW----NIMVSGYARRGDMVEARRLFDAAPVRDVFT 257
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
WTA+VSGYA+ G E +F+ M + V+ +++A + ++++ + F +M
Sbjct: 258 WTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKELFNMM- 312
Query: 404 KEYGIRPIHD--HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
P + + M+ ++AG LEEAK+ + MP DA+ WA +L++
Sbjct: 313 ------PCRNVASWNTMLTGYAQAGMLEEAKAVFDTMP-QKDAVSWAAMLAA 357
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 248/633 (39%), Positives = 380/633 (60%), Gaps = 43/633 (6%)
Query: 21 SVNDAVKVYNLMLKD-GLGNLSRITFSTMLIMSSSRRCVDLGRQ-----IHGHILKFGFG 74
S+N ++ L L D G R ++T+L +RC LG+ +H H+L F
Sbjct: 52 SLNSKTGLHVLDLIDCGSLEPDRTLYNTLL-----KRCTQLGKLKEGKLVHFHVLNSNFK 106
Query: 75 SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGM 134
+ + + L+ MYA R G +E +RRLF M
Sbjct: 107 HDLVIQNSLLFMYA-------------------------------RCGSLEGARRLFDEM 135
Query: 135 KDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGK 194
+D +SWT+MITG QN +A+ LF M +G ++FT S++ CG + + G+
Sbjct: 136 PHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGR 195
Query: 195 QIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNG 254
QIHA + NVFVGS+LVDMY +C + A VF + KN VSW A++ GY + G
Sbjct: 196 QIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKG 255
Query: 255 CSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSN 314
EEA+ +F MQR G P +FT +++SSC+++ LE+G H + + V N
Sbjct: 256 EGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGN 315
Query: 315 ALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKP 374
L+ Y K G+I D+ ++F+++ D VS +++ GYA+ G E F++M+ G++P
Sbjct: 316 TLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEP 375
Query: 375 DEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSF 434
+++T + VL+ACS A L+++G+HYF +M ++Y I P HY ++D+L RAG L++AKSF
Sbjct: 376 NDITFLSVLTACSHARLLDEGKHYFGLM-RKYNIEPKVSHYATIVDLLGRAGLLDQAKSF 434
Query: 435 INKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKW 494
I +MP P W LL + ++H N E+G +AA+ + ELDP P ++ LL++IYAS G+W
Sbjct: 435 IEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGRW 494
Query: 495 DHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKE 554
+ V+++R+ M++ GV+K+P CSW++ ++ VH+F A+D + P ++I+ EKLN+K+ +
Sbjct: 495 EDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWEKLNQKIKEI 554
Query: 555 GYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNAT 614
GYVPD S VL V+ EK L +HSEKLA++F LL PPG IR++KN+RVC DCH+A
Sbjct: 555 GYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTPPGSTIRIMKNIRVCGDCHSAI 614
Query: 615 KYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KY+S + +REI+VRD RFH F +G CSCGD+W
Sbjct: 615 KYVSLVVKREIIVRDTNRFHHFCDGFCSCGDYW 647
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 120/360 (33%), Positives = 187/360 (51%), Gaps = 34/360 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSW +I+G+A + +DA+ ++ ML DG + T S+++ +
Sbjct: 135 MPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDG-AEPNEFTLSSLVKCCGYMASYNC 193
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQIH K+G S VFVGS LVDMYA+ G + +A FD+L KN V +N +I G R
Sbjct: 194 GRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYAR 253
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+G E EA+ LF M+ EG +FT+ ++
Sbjct: 254 KGEGE-------------------------------EALALFVRMQREGYRPTEFTYSAL 282
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L++C + LE+GK +HA ++++ K +VG+ L+ MY K SI+ AE VF + +V
Sbjct: 283 LSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDV 342
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VS +ML+GY Q+G +EA + F M R GIEP+D T SV+++C++ L+EG + G
Sbjct: 343 VSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGL 402
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKANE 359
+ ++ +V G+ G ++ + EM + V+ W AL+ G +K K E
Sbjct: 403 MRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALL-GASKMHKNTE 461
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 239/643 (37%), Positives = 379/643 (58%), Gaps = 32/643 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V++N ++ G + G A++++ M + G+ + TFS++L +++ + LG Q+
Sbjct: 200 DAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPA-THFTFSSILTVAAGMAHLLLGHQV 258
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +L+ VFV + L+D Y+K +
Sbjct: 259 HALVLRSTSVLNVFVNNSLLDFYSKCDCL------------------------------- 287
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
++ RRLF M ++D++S+ +I N + LFREM+ G + ++L+
Sbjct: 288 DDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVA 347
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G L + GKQIHA ++ +G+AL+DMY KC + A+S F + K+ +SWT
Sbjct: 348 GSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWT 407
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
A++ GY QNG EEA+++F +M+R G+ PD T S+I + ++LA + G Q H + +
Sbjct: 408 ALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRS 467
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G S + + LV Y KCG ++++ R F+EM R+ +SW A++S YA +G+A I +F
Sbjct: 468 GYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMF 527
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
E ML G PD VT + VL+ACS GL ++ YF +M +Y I P +HY C+ID L R
Sbjct: 528 EGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGR 587
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
G + + + +MPF D I W ++L SCRIHGN E+ + AA+ L ++P + YV+L
Sbjct: 588 VGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVIL 647
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S+IYA G+W+ + +++ MR++GVRK+ G SW++ K +++ F+++D +SP D+I EL
Sbjct: 648 SNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDEL 707
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
++L ++M K+GY PD++ LH V+ K++ L +HSE+LAIAF L+ P G PIR++KNL
Sbjct: 708 DRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNL 767
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCH K ISKI R+I+VRD+ RFH FK+G CSCGD+W
Sbjct: 768 TACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 134/488 (27%), Positives = 240/488 (49%), Gaps = 40/488 (8%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P + +W +++ HA+ G +DA+ ++ ML +G+ R+T +T+L +
Sbjct: 101 PHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIP-DRVTVTTVLNLPGCTV----- 154
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+H +KFG ++VFV + L+D Y K
Sbjct: 155 PSLHPFAIKFGLDTHVFVCNTLLDAYCK-------------------------------H 183
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
GL+ +RR+F M DKD++++ M+ G + GL +A+ LF MR G+ FTF S+L
Sbjct: 184 GLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSIL 243
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
T G+ L G Q+HA ++R+ NVFV ++L+D Y KC + +F M ++ V
Sbjct: 244 TVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNV 303
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
S+ ++ Y N C+ +++F MQ+ G + +++S +L + G Q H +
Sbjct: 304 SYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQL 363
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
++ GL S + NAL+ Y KCG ++ + F+ + + +SWTAL++GY + G+ E +
Sbjct: 364 VLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEAL 423
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
LF M GL+PD T ++ A S ++ GR +++ G + + ++D+
Sbjct: 424 QLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRS-GYKSSVFSGSVLVDM 482
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
++ G L+EA ++MP ++I W ++S+ +G + E +L +NP S
Sbjct: 483 YAKCGCLDEALRTFDEMP-ERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCG-FNPDSV 540
Query: 482 VLLSSIYA 489
LS + A
Sbjct: 541 TFLSVLAA 548
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 179/363 (49%), Gaps = 9/363 (2%)
Query: 91 GLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLM 150
G ++ A+ FD++P KNI N +++ G + ++ LF +++ +WT M+
Sbjct: 57 GHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHA 116
Query: 151 QNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVF 210
G +A+ LFR M EG+ D+ T +VL G + +H F I+ +VF
Sbjct: 117 AAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV-----PSLHPFAIKFGLDTHVF 171
Query: 211 VGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
V + L+D YCK + A VF M K+ V++ AM++G + G +A+++F M+R G
Sbjct: 172 VCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAG 231
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
I FT S+++ A +A L G Q H L + + + V+N+L+ FY KC ++D
Sbjct: 232 IPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMR 291
Query: 331 RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
RLF+EM RD VS+ +++ YA A + LF +M G + +LS
Sbjct: 292 RLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLP 351
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKS-FINKMPFPPDAIGWAT 449
V G+ +V G+ +ID+ S+ G L+ AKS F N+ AI W
Sbjct: 352 DVHIGKQIHAQLVL-LGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS--EKSAISWTA 408
Query: 450 LLS 452
L++
Sbjct: 409 LIT 411
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 122/275 (44%), Gaps = 23/275 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +SWN +IS +A +G +A+K++ ML G N +TF ++L S D
Sbjct: 499 MPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGF-NPDSVTFLSVLAACSHNGLADE 557
Query: 61 GRQIHGHILK--FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEK-NIVMYNTMITG 117
+ + H++K + + + ++D ++G ++ E+P K + +++ +++
Sbjct: 558 CMK-YFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHS 616
Query: 118 LLRRGLVEESR----RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
G E +R +LF GM+ D+ + + + G +A + + MR G+ +
Sbjct: 617 CRIHGNQELARVAADKLF-GMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKE 675
Query: 174 Q-----------FTFGSV-LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK 221
++F S LT+ +E +++ + + +K ++ +VD K
Sbjct: 676 SGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELK 735
Query: 222 CKSIKY-AESVFRTMAWKNVVSWTAMLVGYGQNGC 255
+S+KY +E + A N + T + + C
Sbjct: 736 LESLKYHSERLAIAFALMNTPAGTPIRIMKNLTAC 770
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 240/643 (37%), Positives = 378/643 (58%), Gaps = 32/643 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V++N ++ G + G A++++ M + G+ + TFS++L +++ + LG Q+
Sbjct: 200 DAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPA-THFTFSSILTVAAGMAHLLLGHQV 258
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +L+ VFV + L+D Y+K + D
Sbjct: 259 HALVLRSTSVLNVFVNNSLLDFYSKCDCLDDM---------------------------- 290
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
RRLF M ++D++S+ +I N + LFREM+ G + ++L+
Sbjct: 291 ---RRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVA 347
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G L + GKQIHA ++ +G+AL+DMY KC + A+S F + K+ +SWT
Sbjct: 348 GSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWT 407
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
A++ GY QNG EEA+++F +M+R G+ PD T S+I + ++LA + G Q H + +
Sbjct: 408 ALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRS 467
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G S + + LV Y KCG ++++ R F+EM R+ +SW A++S YA +G+A I +F
Sbjct: 468 GYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMF 527
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
E ML G PD VT + VL+ACS GL ++ YF +M +Y I P +HY C+ID L R
Sbjct: 528 EGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGR 587
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
G + + + +MPF D I W ++L SCRIHGN E+ + AA+ L ++P + YV+L
Sbjct: 588 VGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVIL 647
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S+IYA G+W+ + +++ MR++GVRK+ G SW++ K +++ F+++D +SP D+I EL
Sbjct: 648 SNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDEL 707
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
++L ++M K+GY PD++ LH V+ K++ L +HSE+LAIAF L+ P G PIR++KNL
Sbjct: 708 DRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNL 767
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCH K ISKI R+I+VRD+ RFH FK+G CSCGD+W
Sbjct: 768 TACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 135/488 (27%), Positives = 241/488 (49%), Gaps = 40/488 (8%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P + +W +++ HA+ G +DA+ ++ ML +G+ R+T +T+L + C
Sbjct: 101 PHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIP-DRVTVTTVLNLPG---CT--V 154
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+H +KFG ++VFV + L+D Y K
Sbjct: 155 PSLHPFAIKFGLDTHVFVCNTLLDAYCK-------------------------------H 183
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
GL+ +RR+F M DKD++++ M+ G + GL +A+ LF MR G+ FTF S+L
Sbjct: 184 GLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSIL 243
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
T G+ L G Q+HA ++R+ NVFV ++L+D Y KC + +F M ++ V
Sbjct: 244 TVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNV 303
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
S+ ++ Y N C+ +++F MQ+ G + +++S +L + G Q H +
Sbjct: 304 SYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQL 363
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
++ GL S + NAL+ Y KCG ++ + F+ + + +SWTAL++GY + G+ E +
Sbjct: 364 VLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEAL 423
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
LF M GL+PD T ++ A S ++ GR +++ G + + ++D+
Sbjct: 424 QLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRS-GYKSSVFSGSVLVDM 482
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
++ G L+EA ++MP ++I W ++S+ +G + E +L +NP S
Sbjct: 483 YAKCGCLDEALRTFDEMP-ERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCG-FNPDSV 540
Query: 482 VLLSSIYA 489
LS + A
Sbjct: 541 TFLSVLAA 548
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 182/372 (48%), Gaps = 9/372 (2%)
Query: 91 GLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLM 150
G ++ A+ FD++P KNI N +++ G + ++ LF +++ +WT M+
Sbjct: 57 GHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHA 116
Query: 151 QNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVF 210
G +A+ LFR M EG+ D+ T +VL G + +H F I+ +VF
Sbjct: 117 AAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV-----PSLHPFAIKFGLDTHVF 171
Query: 211 VGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
V + L+D YCK + A VF M K+ V++ AM++G + G +A+++F M+R G
Sbjct: 172 VCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAG 231
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
I FT S+++ A +A L G Q H L + + + V+N+L+ FY KC ++D
Sbjct: 232 IPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMR 291
Query: 331 RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
RLF+EM RD VS+ +++ YA A + LF +M G + +LS
Sbjct: 292 RLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLP 351
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKS-FINKMPFPPDAIGWAT 449
V G+ +V G+ +ID+ S+ G L+ AKS F N+ AI W
Sbjct: 352 DVHIGKQIHAQLVL-LGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS--EKSAISWTA 408
Query: 450 LLSSCRIHGNVE 461
L++ +G E
Sbjct: 409 LITGYVQNGQHE 420
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 122/275 (44%), Gaps = 23/275 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +SWN +IS +A +G +A+K++ ML G N +TF ++L S D
Sbjct: 499 MPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGF-NPDSVTFLSVLAACSHNGLADE 557
Query: 61 GRQIHGHILK--FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEK-NIVMYNTMITG 117
+ + H++K + + + ++D ++G ++ E+P K + +++ +++
Sbjct: 558 CMK-YFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHS 616
Query: 118 LLRRGLVEESR----RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
G E +R +LF GM+ D+ + + + G +A + + MR G+ +
Sbjct: 617 CRIHGNQELARVAADKLF-GMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKE 675
Query: 174 Q-----------FTFGSV-LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK 221
++F S LT+ +E +++ + + +K ++ +VD K
Sbjct: 676 SGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELK 735
Query: 222 CKSIKY-AESVFRTMAWKNVVSWTAMLVGYGQNGC 255
+S+KY +E + A N + T + + C
Sbjct: 736 LESLKYHSERLAIAFALMNTPAGTPIRIMKNLTAC 770
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 258/648 (39%), Positives = 394/648 (60%), Gaps = 36/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSWN L++G + +A+++++ + + LS+ T+ST++ + ++ + + L
Sbjct: 262 METRDMVSWNTLMAGLLLNEHQLEALQLFHDS-RASMAKLSQSTYSTVIKLCANLKQLAL 320
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
RQ+H +LK GF S V + ++D Y+K G + DA F +P
Sbjct: 321 ARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMP---------------- 364
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
++ +SWT MI G +QN A LF MR + + ++FT+ +V
Sbjct: 365 --------------GSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTV 410
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LTA +L QIHA II+ +++ VG+AL+ Y K + + A S+F+ + K+V
Sbjct: 411 LTASIPILL----PQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDV 466
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN-LASLEEGTQFHG 299
V+W+AML Y Q G + A +F M G++P++FT+ S I +CA+ A +++G QFH
Sbjct: 467 VAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHA 526
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
S+ I V +ALVT Y + G+I+ + +F RD VSW +++SGYA+ G + E
Sbjct: 527 ISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKE 586
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+D F +M + G++ D T + V+ C+ AGLV++G+ YF+ MV ++ I P +HY+CM+
Sbjct: 587 ALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMV 646
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+ SRAG+L+E + I MPFP A+ W TLL +CR+H NVE+GK AA+ LL L+P + A
Sbjct: 647 DLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKLLLLEPDDSA 706
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+YVLLS+IYA+ G+W ++R+ M K V+K+ GCSWI+ K++VH F A D S P S+Q
Sbjct: 707 TYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQIKNKVHSFIACDKSHPLSEQ 766
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IYA+L+ + ++ +EGY P+ S VLHD+ +K ML HSE+LA+AFGL+ PP P++
Sbjct: 767 IYAKLKAMTTRLKQEGYCPNTSVVLHDIAEEQKETMLVMHSERLALAFGLIATPPRTPLQ 826
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+VKNLRVC DCH K +S I REI++RD RFH F G CSCGDFW
Sbjct: 827 IVKNLRVCGDCHMVMKMVSLIEDREIIMRDCSRFHHFNAGACSCGDFW 874
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 127/460 (27%), Positives = 239/460 (51%), Gaps = 40/460 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+W L++G+ + +D + ++ M +G+ + TF+++L +S+ VDL
Sbjct: 161 MPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWP-NPFTFTSVLSAVASQGAVDL 219
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR++H +KFG S VFV + L++MY+K GL+ +AK F ++ +++V +NT++ GLL
Sbjct: 220 GRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLL 279
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
N + EA+ LF + R + Q T+ +V
Sbjct: 280 -------------------------------NEHQLEALQLFHDSRASMAKLSQSTYSTV 308
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM-AWKN 239
+ C L L +Q+H+ ++++ + V +A++D Y KC + A ++F M +N
Sbjct: 309 IKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQN 368
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VVSWTAM+ G QN A +F M+ + ++P++FT +V++ A++ L Q H
Sbjct: 369 VVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLT--ASIPILLP--QIHA 424
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ + T +V AL+ Y K GN E++ +F ++ +D V+W+A++S Y++ G +
Sbjct: 425 QIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDG 484
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSAC-SRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
++F KM G+KP+E T+ + AC S +++GR + I +K Y + + +
Sbjct: 485 ATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIK-YRYQDAICVGSAL 543
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ + +R G ++ A+ + D + W +++S HG
Sbjct: 544 VTMYARKGSIDSARIVFERQT-DRDLVSWNSMISGYAQHG 582
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 211/451 (46%), Gaps = 54/451 (11%)
Query: 61 GRQIHGHILKFGFG-SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G Q+H +K GF + V VG+ LVDMY K G
Sbjct: 118 GEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGG--------------------------- 150
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
VE+ R +F GM ++ ++WT+++TG +Q + + LF MR EG+ + FTF S
Sbjct: 151 ----VEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTS 206
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL+A A++ G+++HA ++ + VFV ++L++MY KC ++ A++VFR M ++
Sbjct: 207 VLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRD 266
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+VSW ++ G N EA+++F + + + + T +VI CANL L Q H
Sbjct: 267 MVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHS 326
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM-NVRDEVSWTALVSGYAKFGKAN 358
L G S V A++ Y KCG ++D+ +F M ++ VSWTA++ G +
Sbjct: 327 CVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIP 386
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--- 415
LF +M +KP+E T VL+A I++ + + I +Y
Sbjct: 387 LAAALFSRMREDNVKPNEFTYSTVLTA------------SIPILLPQIHAQIIKTNYQHA 434
Query: 416 ----TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL 471
T ++ S+ G EEA S I KM D + W+ +LS G+ + G +
Sbjct: 435 PSVGTALLASYSKLGNTEEALS-IFKMIDHKDVVAWSAMLSCYSQAGDCD-GATNVFIKM 492
Query: 472 ELDPYNPASYVLLSSIYASKGKWDHVSQLRR 502
+ P + + S+I A + Q R+
Sbjct: 493 SMQGMKPNEFTISSAIDACASPTAGIDQGRQ 523
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 255/648 (39%), Positives = 392/648 (60%), Gaps = 7/648 (1%)
Query: 4 HDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQ 63
H+ WN LI G++ S ++ +++ ML G+ S TF + + + G+Q
Sbjct: 94 HNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSH-TFPFLFKSCTKAKATHEGKQ 152
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
+H H LK V + ++ MYA +G + A+ FD+ ++ V + +ITG + +G
Sbjct: 153 LHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGC 212
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
++++RRLF + KD +SW MI+G +Q+G EAI F EM+ + ++ T VL+A
Sbjct: 213 LDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSA 272
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
CG + E GK I +++ N N+ + +AL+DMYCKC A +F + K+V+SW
Sbjct: 273 CGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISW 332
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG---R 300
M+ GY EEA+ +F M R+ ++P+D T ++ +CA L +L+ G H +
Sbjct: 333 NTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDK 392
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+L S ++ +L+ Y KCG IE + R+F M+ R+ SW A++SG+A G A
Sbjct: 393 NLRNS--SNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERA 450
Query: 361 IDLFEKMLSHGL-KPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ LF +M++ GL +PD++T +GVLSAC++AGLV+ G YF M+++YGI P HY CMI
Sbjct: 451 LALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMI 510
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L+RA + EEA+ + M PD W +LLS+C+ HG VE G++ AE L +L+P N
Sbjct: 511 DLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAG 570
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
++VLLS+IYA G+WD V+++R + +KG++K PGC+ I+ VH F D P +
Sbjct: 571 AFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNN 630
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY L ++++ + + G+VP+ S VL+D++ K L+ HSEKLAI+FGL+ PG IR
Sbjct: 631 IYKMLNEVDKLLEENGFVPNTSEVLYDMDEEWKEGALSQHSEKLAISFGLIKTKPGTTIR 690
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+VKNLRVC +CH+ATK ISKI REI+ RD RFH FK+G CSC D W
Sbjct: 691 IVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDCW 738
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 182/390 (46%), Gaps = 42/390 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDA-VKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
+P D VSWN +ISG+ G +A V Y + + L N S T +L R +
Sbjct: 223 IPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKS--TMVVVLSACGHTRSGE 280
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
LG+ I + GFGS + + + L+DMY K G A+ FD + EK+++ +NTMI G
Sbjct: 281 LGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYS 340
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
L E EA+ LF M + + TF
Sbjct: 341 YLSLYE-------------------------------EALALFEVMLRSNVKPNDVTFLG 369
Query: 180 VLTACGGLLALEEGKQIHAFIIRN-DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
+L AC L AL+ GK +HA+I +N + N + ++L+DMY KC I+ AE VFR+M +
Sbjct: 370 ILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSR 429
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGI-EPDDFTLGSVISSCANLASLEEGTQF 297
N+ SW AML G+ +G +E A+ +F M G+ PDD T V+S+C ++ G Q+
Sbjct: 430 NLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQY 489
Query: 298 HGRSLVT--GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKF 354
RS++ G+ + ++ + E++ L M + D W +L+S
Sbjct: 490 F-RSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAH 548
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
G+ + E++ L+P+ +LS
Sbjct: 549 GRVEFGEYVAERLFQ--LEPENAGAFVLLS 576
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 138/320 (43%), Gaps = 49/320 (15%)
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS--IKYAE 229
++Q + ++L C + KQIH+ II+ + VFV S L+ S + YA
Sbjct: 26 LEQHPYLNLLEKCKNINTF---KQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYAL 82
Query: 230 SVFRTMAW---KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCA 286
S+F NV W +++ GY + ++ +F M G++P+ T + SC
Sbjct: 83 SLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCT 142
Query: 287 NLASLEEGTQFHGRSLVTGL-----------------------------------ISFIT 311
+ EG Q H +L L +SF
Sbjct: 143 KAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSF-- 200
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG 371
AL+T Y G ++D+ RLF+E+ V+D VSW A++SGY + G+ E I F +M
Sbjct: 201 --TALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEAN 258
Query: 372 LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEA 431
+ P++ T++ VLSAC E G+ + V++ G +ID+ + G + A
Sbjct: 259 VLPNKSTMVVVLSACGHTRSGELGK-WIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIA 317
Query: 432 KSFINKMPFPPDAIGWATLL 451
+ + + D I W T++
Sbjct: 318 RELFDGIE-EKDVISWNTMI 336
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 240/606 (39%), Positives = 370/606 (61%), Gaps = 32/606 (5%)
Query: 42 RITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFD 101
R +S ML + R + GR IH HI F + + + +++MYAK G +
Sbjct: 105 RTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSL-------- 156
Query: 102 ELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDL 161
EE++ LF M KD +SWT +I+G Q+G EA+ L
Sbjct: 157 -----------------------EEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALAL 193
Query: 162 FREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK 221
F +M G ++FT S+L A G + G+Q+HAF ++ + NV VGS+L+DMY +
Sbjct: 194 FPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYAR 253
Query: 222 CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
++ A+ +F ++A KNVVSW A++ G+ + G E +++F M R G EP FT SV
Sbjct: 254 WAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSV 313
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE 341
++CA+ SLE+G H + +G + N L+ Y K G+I+D+ ++F + +D
Sbjct: 314 FTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDI 373
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEI 401
VSW +++SGYA+ G E + LFE+ML ++P+E+T + VL+ACS +GL+++G++YFE+
Sbjct: 374 VSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFEL 433
Query: 402 MVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
M K++ I H+ ++D+L RAGRL EA FI +MP P A W LL SCR+H N++
Sbjct: 434 M-KKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMD 492
Query: 462 IGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYK 521
+G +AAE + ELDP++ +VLLS+IYAS G+ +++R+ M+E GV+K+P CSW++ +
Sbjct: 493 LGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIE 552
Query: 522 SRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSE 581
+ VH+F A+D S P ++I EK++ K+ + GYVPD S VL + ++ L +HSE
Sbjct: 553 NEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSE 612
Query: 582 KLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGEC 641
KLA+AF +L PPGL IR+ KN+R+C DCH+A K+ S++ REI+VRD RFH F +G C
Sbjct: 613 KLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMC 672
Query: 642 SCGDFW 647
SC D+W
Sbjct: 673 SCRDYW 678
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 183/349 (52%), Gaps = 33/349 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSW +LISG++ G ++A+ ++ ML G + T S++L S +
Sbjct: 166 MPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGF-QPNEFTLSSLLKASGTGPSDHH 224
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H LK+G+ V VGS L+DMYA+ + +AK F+ L KN+V +N +I G R
Sbjct: 225 GRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHAR 284
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+G E R LF +M +G FT+ SV
Sbjct: 285 KGEGEHVMR-------------------------------LFLQMLRQGFEPTHFTYSSV 313
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
TAC +LE+GK +HA +I++ + ++G+ L+DMY K SIK A+ VFR + +++
Sbjct: 314 FTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDI 373
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW +++ GY Q+G EA+++F M + ++P++ T SV+++C++ L+EG +
Sbjct: 374 VSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFEL 433
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALV 348
+ + + +V G+ G + ++++ EM ++ + W AL+
Sbjct: 434 MKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALL 482
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 163/289 (56%), Gaps = 2/289 (0%)
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
L ++ + +L C L L++G+ IHA I + +D++ + + +++MY KC S++ A+
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
+F M K++VSWT ++ GY Q+G + EA+ +F M G +P++FTL S++ +
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
S G Q H SL G + V ++L+ Y + ++ ++ +FN + ++ VSW AL++
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
G+A+ G+ + LF +ML G +P T V +AC+ +G +E+G+ + V + G +
Sbjct: 281 GHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGK-WVHAHVIKSGGQ 339
Query: 410 PIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
PI +ID+ +++G +++AK ++ D + W +++S HG
Sbjct: 340 PIAYIGNTLIDMYAKSGSIKDAKKVFRRL-VKQDIVSWNSIISGYAQHG 387
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 241/609 (39%), Positives = 366/609 (60%), Gaps = 41/609 (6%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
++ +L ++R V G+++H H++K + V++ + L+ +Y K + A+ FDE+
Sbjct: 13 YNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMR 72
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
E+N+ +SWT MI+G Q G EA+ LF +
Sbjct: 73 ERNV-------------------------------VSWTAMISGYSQRGFASEALHLFVQ 101
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M ++FTF +VL++C G E G+QIH+ I + ++++++FVGS+L+DMY K
Sbjct: 102 MLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGR 161
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
I A VF + ++VVS TA++ GY Q G EEA+++FC +QR G+ + T S++++
Sbjct: 162 IHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTA 221
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
+ LA+L+ G Q H L L ++ + N+L+ Y KCGN+ + ++FN M VR +SW
Sbjct: 222 LSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISW 281
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
A++ GY+K GK E + LF+ M +KPD VT + VLS CS GL +KG F+ M+
Sbjct: 282 NAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMM 341
Query: 404 K-----EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
E GI +HY C+ID+L RAGR+EEA I KMPF P A W +LL +CR+H
Sbjct: 342 NGGDEIEAGI----EHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHS 397
Query: 459 NVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWI 518
N IG++ LLE++P N +YV+LS++YAS G+W+ V +R M EK V K+PG SWI
Sbjct: 398 NTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGRWEDVRNVRELMMEKAVIKEPGRSWI 457
Query: 519 KYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNH 578
+ +H F A D S P ++++ ++ +L K + GYVPD S VL+DV+ +K K+L
Sbjct: 458 ELDQTIHTFYASDRSHPRREEVFLKVRELLVKFKESGYVPDQSCVLYDVDEEQKEKILLG 517
Query: 579 HSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKN 638
HSEKLA+AFGL+ G+P+RV+KNLR+C DCHN K++SK+ R++ +RD RFH
Sbjct: 518 HSEKLALAFGLISTSEGVPLRVIKNLRICVDCHNFAKFVSKVYGRQVSIRDKNRFHHVAG 577
Query: 639 GECSCGDFW 647
G CSCGD+W
Sbjct: 578 GICSCGDYW 586
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 188/346 (54%), Gaps = 36/346 (10%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW +ISG++ G ++A+ ++ ML+ + TF+T+L + +LGRQIH
Sbjct: 77 VSWTAMISGYSQRGFASEALHLFVQMLRSDT-EPNEFTFATVLSSCTGFSGFELGRQIHS 135
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
HI K + +++FVGS L+DMYAK G I++A
Sbjct: 136 HIFKRNYENHIFVGSSLLDMYAKAGRIHEA------------------------------ 165
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
R +F + ++D +S T +I+G Q GL+ EA++LF ++ EG++ + T+ S+LTA G
Sbjct: 166 -RGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSG 224
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L AL+ GKQ+H+ ++R + V + ++L+DMY KC ++ YA +F M + V+SW AM
Sbjct: 225 LAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAM 284
Query: 247 LVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
LVGY ++G E VK+F M + N ++PD T +V+S C++ ++G + + G
Sbjct: 285 LVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGG 344
Query: 306 --LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALV 348
+ + I ++ G+ G +E++ L +M + W +L+
Sbjct: 345 DEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLL 390
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 153/298 (51%), Gaps = 10/298 (3%)
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M ++G + + +L C A+ EG+++HA +I+ + V++ + L+ +Y KC+
Sbjct: 1 MAIQGPEIKFDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCEC 60
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A VF M +NVVSWTAM+ GY Q G + EA+ +F M R+ EP++FT +V+SS
Sbjct: 61 LGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSS 120
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
C + E G Q H + I V ++L+ Y K G I ++ +F + RD VS
Sbjct: 121 CTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSC 180
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
TA++SGYA+ G E ++LF ++ G+ + VT +L+A S ++ G+ V
Sbjct: 181 TAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQ-----VH 235
Query: 405 EYGIRPIHDHYTC----MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ +R Y +ID+ S+ G L A+ N MP I W +L HG
Sbjct: 236 SHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRT-VISWNAMLVGYSKHG 292
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
[Vitis vinifera]
Length = 1005
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 254/644 (39%), Positives = 363/644 (56%), Gaps = 33/644 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+W+ +I+ G +A+ ++ M + +R+T ++L + + LG+ I
Sbjct: 394 DLVAWSAIIAALVQTGYPEEALSLFQEMQNQKM-KPNRVTLMSILPACADLSLLKLGKSI 452
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +K S + G+ LV MYAK G A F+
Sbjct: 453 HCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNR---------------------- 490
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
M +D ++W ++I G Q G AID+F ++RL + D T V+ AC
Sbjct: 491 ---------MSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPAC 541
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF-RTMAWKNVVSW 243
L L++G IH I++ + + V +AL+DMY KC S+ AE +F +T K+ V+W
Sbjct: 542 ALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTW 601
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
++ Y QNG ++EA+ F M+ P+ T SV+ + A LA+ EG FH +
Sbjct: 602 NVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQ 661
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
G +S V N+L+ Y KCG ++ S +LFNEM+ +D VSW A++SGYA G + I L
Sbjct: 662 MGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIAL 721
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F M ++ D V+ + VLSAC AGLVE+GR F M +Y I+P +HY CM+D+L
Sbjct: 722 FSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLG 781
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
RAG +E FI MP PDA W LL SCR+H NV++G+ A + L++L+P NPA +V+
Sbjct: 782 RAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVV 841
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LSSIYA G+W + R M + G++K PGCSW++ K++VH F D S P + ++
Sbjct: 842 LSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLL 901
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
L KM K GYVPD S VL +VE +K L HSE+LAI F LL PPG I++VKN
Sbjct: 902 WNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKN 961
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LRVC+DCH TK+ISKIT R I+VRDA RFH F++G CSC D+W
Sbjct: 962 LRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 137/492 (27%), Positives = 245/492 (49%), Gaps = 40/492 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V+WN +I+G + +AV + M G+ S ++ + ++L
Sbjct: 190 MPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGV-EPSSVSLLNLFPGICKLSNIEL 248
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
R IHG++ + F S V G L+D+Y+K G
Sbjct: 249 CRSIHGYVFRRDFSSAVSNG--LIDLYSKCGD---------------------------- 278
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
V+ +RR+F M D+D +SW TM+ G NG E ++LF +M+L + +++ + S
Sbjct: 279 ---VDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSA 335
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
A + LE+GK+IH ++ ++ V + L+ MY KC + A+ +F + +++
Sbjct: 336 FLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDL 395
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+W+A++ Q G EEA+ +F MQ ++P+ TL S++ +CA+L+ L+ G H
Sbjct: 396 VAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCF 455
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ + S ++ ALV+ Y KCG + FN M+ RD V+W +L++GYA+ G
Sbjct: 456 TVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNA 515
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
ID+F K+ + PD T++GV+ AC+ +++G ++VK G +ID
Sbjct: 516 IDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVK-LGFESDCHVKNALID 574
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL--LELDPYNP 478
+ ++ G L A+ NK F D + W ++++ +G+ K A S + L+ ++P
Sbjct: 575 MYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGH---AKEAISSFHQMRLENFHP 631
Query: 479 ASYVLLSSIYAS 490
S +S + A+
Sbjct: 632 NSVTFVSVLPAA 643
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/476 (27%), Positives = 224/476 (47%), Gaps = 51/476 (10%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P + WN +I + N+A+++Y M++ GL + TF+ +L + + G
Sbjct: 90 PNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGL-EPDKYTFTFVLKACTGALNLQEG 148
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
HG I + G VF+G+ LVDMY+K+G + A+ FD++P++
Sbjct: 149 VWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKR--------------- 193
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
D ++W MI GL Q+ EA+D FR M+L G+ + ++
Sbjct: 194 ----------------DVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLF 237
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
L +E + IH ++ R D V G L+D+Y KC + A VF M ++ V
Sbjct: 238 PGICKLSNIELCRSIHGYVFRRDFSSAVSNG--LIDLYSKCGDVDVARRVFDQMVDQDDV 295
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW M+ GY NGC E +++F M+ + + + S + A LE+G + HG +
Sbjct: 296 SWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCA 355
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
L + S I V+ L+ Y KCG E + +LF + RD V+W+A+++ + G E +
Sbjct: 356 LQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEAL 415
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
LF++M + +KP+ VTL+ +L AC+ L++ G+ VK + T ++ +
Sbjct: 416 SLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKA-DMDSDLSTGTALVSM 474
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
++ G A + N+M D + W +L I+G +IG DPYN
Sbjct: 475 YAKCGFFTAALTTFNRMS-SRDIVTWNSL-----INGYAQIG----------DPYN 514
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 171/327 (52%), Gaps = 4/327 (1%)
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+R +F + I W +MI ++ EA++++ M +GL D++TF VL AC G
Sbjct: 82 ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTG 141
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L L+EG H I R + +VF+G+ LVDMY K +K A VF M ++VV+W AM
Sbjct: 142 ALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAM 201
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ G Q+ EAV F +MQ G+EP +L ++ L+++E HG
Sbjct: 202 IAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDF 261
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
S VSN L+ Y KCG+++ + R+F++M +D+VSW +++GYA G E ++LF+K
Sbjct: 262 SS--AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDK 319
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M ++ ++V+ + A + +EKG+ +++ I M+ + ++ G
Sbjct: 320 MKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMV-MYAKCG 378
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSS 453
E+AK + D + W+ ++++
Sbjct: 379 ETEKAKQLFWGLQ-GRDLVAWSAIIAA 404
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 137/276 (49%), Gaps = 8/276 (2%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
+ +L++C L L QIHA II + K + + + L+++Y A SVF +
Sbjct: 35 YPRLLSSCKHLNPL---LQIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTP 90
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
+ + W +M+ Y ++ EA++++ M G+EPD +T V+ +C +L+EG
Sbjct: 91 NPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVW 150
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
FHG GL + + LV Y K G+++ + +F++M RD V+W A+++G ++
Sbjct: 151 FHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSED 210
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
E +D F M G++P V+L+ + + +E R + + + +
Sbjct: 211 PCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNG-- 268
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ID+ S+ G ++ A+ ++M D + W T+++
Sbjct: 269 -LIDLYSKCGDVDVARRVFDQM-VDQDDVSWGTMMA 302
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSWN ++SG+A HG + A+ +++LM ++ + ++F ++L V+
Sbjct: 694 MDHKDTVSWNAMLSGYAVHGHGDRAIALFSLM-QESQVQIDSVSFVSVLSACRHAGLVEE 752
Query: 61 GRQI-HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF 100
GR+I H K+ + + +VD+ + GL +D GF
Sbjct: 753 GRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGL-FDETLGF 792
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/643 (38%), Positives = 382/643 (59%), Gaps = 12/643 (1%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
++W +I +ASHG + ++ +NL+ G+ R F ++L S+ + +L + +H
Sbjct: 42 LAWICIIKCYASHGLLRHSLASFNLLRSFGISP-DRHLFPSLLRASTLFKHFNLAQSLHA 100
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+++ GF ++ + L++MY+K F + + Y+ I +
Sbjct: 101 AVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSV-------- 152
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
R+LF M +D +SW T+I G QNG+ EA+++ +EM E L D FT S+L
Sbjct: 153 -RKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTE 211
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+ +GK+IH + IR+ +VF+GS+L+DMY KC ++ + F ++ ++ +SW ++
Sbjct: 212 HANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSI 271
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ G QNG ++ + F M + ++P + SVI +CA+L +L G Q H + G
Sbjct: 272 IAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGF 331
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFN--EMNVRDEVSWTALVSGYAKFGKANETIDLF 364
++++L+ Y KCGNI+ + +FN EM RD VSWTA++ G A G A + + LF
Sbjct: 332 DDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLF 391
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
E+ML G+KP V + VL+ACS AGLV++G YF M +++G+ P +HY + D+L R
Sbjct: 392 EEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGR 451
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AGRLEEA FI+ M P W+TLL++CR H N+E+ + +L +DP N ++V++
Sbjct: 452 AGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAHVIM 511
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S+IY++ +W ++LR MR+ G++K P CSWI+ ++VH F A D S PY D+I L
Sbjct: 512 SNIYSAAQRWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKINEAL 571
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
L +M KEGYV D + VLHDV+ K +L HSE+LAIAFG++ G IRV+KN+
Sbjct: 572 NILLEQMEKEGYVLDTNEVLHDVDEEHKRDLLRTHSERLAIAFGIISTTSGTTIRVIKNI 631
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RVC DCH A K+++KI REI+VRD RFH FKNG CSCGD+W
Sbjct: 632 RVCVDCHTAIKFMAKIVGREIIVRDNSRFHHFKNGSCSCGDYW 674
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 204/402 (50%), Gaps = 54/402 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN +I+G+A +G +A+ + M K+ L S T S++L + + V
Sbjct: 159 MPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDS-FTLSSILPIFTEHANVTK 217
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G++IHG+ ++ GF VF+GS L+DMYAK + + F L ++ + +N++I G +
Sbjct: 218 GKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCV- 276
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
QNG + + FR M E + Q +F SV
Sbjct: 277 ------------------------------QNGRFDQGLGFFRRMLKEKVKPMQVSFSSV 306
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT--MAWK 238
+ AC L AL GKQ+HA+IIR DN F+ S+L+DMY KC +IK A +F M +
Sbjct: 307 IPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDR 366
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
++VSWTA+++G +G + +AV +F M +G++P +V+++C++ ++EG ++
Sbjct: 367 DMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYF 426
Query: 299 GR-----SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYA 352
+ GL + V++ L G+ G +E+++ + M S W+ L++
Sbjct: 427 NSMQRDFGVAPGLEHYAAVADLL----GRAGRLEEAYDFISNMGEEPTGSVWSTLLAA-- 480
Query: 353 KFGKANETIDLFEKMLSHGLKPD------EVTLIGVLSACSR 388
+A++ I+L EK+++ L D V + + SA R
Sbjct: 481 --CRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQR 520
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 165/344 (47%), Gaps = 24/344 (6%)
Query: 139 SISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHA 198
S++W +I +GL R ++ F +R G++ D+ F S+L A + +HA
Sbjct: 41 SLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHA 100
Query: 199 FIIRNDHKDNVFVGSALVDMYCKCK----------------------SIKYAESVFRTMA 236
+IR +++ +AL++MY K I +F M
Sbjct: 101 AVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMP 160
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
++VVSW ++ G QNG EEA+ + M + + PD FTL S++ A++ +G +
Sbjct: 161 VRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKE 220
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
HG ++ G + + ++L+ Y KC +E S F+ ++ RD +SW ++++G + G+
Sbjct: 221 IHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGR 280
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
++ + F +ML +KP +V+ V+ AC+ + G+ +++ G +
Sbjct: 281 FDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIR-LGFDDNKFIAS 339
Query: 417 CMIDILSRAGRLEEAKSFINKMPF-PPDAIGWATLLSSCRIHGN 459
++D+ ++ G ++ A+ NK+ D + W ++ C +HG+
Sbjct: 340 SLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGH 383
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 113/270 (41%), Gaps = 33/270 (12%)
Query: 220 CKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLG 279
C K + +A+ V T A + ++W ++ Y +G ++ F ++ GI PD
Sbjct: 22 CHVKQL-HAQIVKTTKATPHSLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFP 80
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGK----------------- 322
S++ + H + G + +NAL+ Y K
Sbjct: 81 SLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHN 140
Query: 323 -----CGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEV 377
I+ +LF+ M VRD VSW +++G A+ G E +++ ++M L+PD
Sbjct: 141 HNNKYSVKIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSF 200
Query: 378 TLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY----TCMIDILSRAGRLEEAKS 433
TL +L + V KG+ + Y IR D + +ID+ ++ ++E +
Sbjct: 201 TLSSILPIFTEHANVTKGKE-----IHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVC 255
Query: 434 FINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
+ + DAI W ++++ C +G + G
Sbjct: 256 AFHLLS-NRDAISWNSIIAGCVQNGRFDQG 284
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 243/621 (39%), Positives = 385/621 (61%), Gaps = 37/621 (5%)
Query: 32 MLKDGLGNLSRITFSTMLIMSSSRRCVD-----LGRQIHGHILKFGFGSYVFVGSPLVDM 86
+ ++ +G++S F++ ++ + C+ G+ +H ILK G +F + L++M
Sbjct: 23 LTQEFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNM 82
Query: 87 YAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMI 146
Y K + DA + FDE+P ++++IS+ T+I
Sbjct: 83 YVKSDFLCDASKLFDEMP-------------------------------ERNTISFVTLI 111
Query: 147 TGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHK 206
G ++ EAI+LF + E L +QFTF SVL AC + L G QIH +I+
Sbjct: 112 QGYAESVRFLEAIELFVRLHREVLP-NQFTFASVLQACATMEGLNLGNQIHCHVIKIGLH 170
Query: 207 DNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM 266
+VFV +AL+D+Y KC ++ + +F +N V+W ++VG+ Q G E+A+++F NM
Sbjct: 171 SDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNM 230
Query: 267 QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
++ + T S + +CA+LA+LE G Q H ++ T I V+NAL+ Y KCG+I
Sbjct: 231 LEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSI 290
Query: 327 EDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSAC 386
+D+ +F+ MN +DEVSW A++SGY+ G E + +F+KM +KPD++T +GVLSAC
Sbjct: 291 KDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSAC 350
Query: 387 SRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIG 446
+ AGL+++G+ YF M++++GI P +HYTCM+ +L R G L++A I+++PF P +
Sbjct: 351 ANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMV 410
Query: 447 WATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMRE 506
W LL +C IH ++E+G+ +A+ +LE++P + A++VLLS++YA+ +WD+V+ +R+ M+
Sbjct: 411 WRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKR 470
Query: 507 KGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHD 566
KGV+K+PG SWI+ + VH F+ D S P I LE L+ K K GY+P+ + VL D
Sbjct: 471 KGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLD 530
Query: 567 VELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREIL 626
VE EK ++L HSE+LA++FG++ P G PIR++KNLR+C DCH A K ISK+ QREI+
Sbjct: 531 VEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIV 590
Query: 627 VRDAVRFHLFKNGECSCGDFW 647
VRD RFH F+ G CSCGD+W
Sbjct: 591 VRDINRFHHFQEGLCSCGDYW 611
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/353 (32%), Positives = 186/353 (52%), Gaps = 37/353 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +S+ LI G+A +A++++ + ++ L N + TF+++L ++ ++L
Sbjct: 99 MPERNTISFVTLIQGYAESVRFLEAIELFVRLHREVLPN--QFTFASVLQACATMEGLNL 156
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G QIH H++K G S VFV + L+D+YAK G + ++ F E P +N V +NT+I G ++
Sbjct: 157 GNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQ 216
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G E++ RLF M E R++ + T+ S
Sbjct: 217 LGDGEKALRLFLNM----------------------------LEYRVQA---TEVTYSSA 245
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L ALE G QIH+ ++ ++ V +AL+DMY KC SIK A VF M ++
Sbjct: 246 LRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDE 305
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW AM+ GY +G EA++IF MQ ++PD T V+S+CAN L++G Q +
Sbjct: 306 VSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQG-QAYFT 364
Query: 301 SLVT--GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV-SWTALVSG 350
S++ G+ I +V G+ G+++ + +L +E+ + V W AL+
Sbjct: 365 SMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGA 417
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 241/623 (38%), Positives = 378/623 (60%), Gaps = 10/623 (1%)
Query: 25 AVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLV 84
A+ Y M K + + ++L S +G++IHG +K G S VFV + L+
Sbjct: 93 ALNTYTYMRKLDI-EVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALM 151
Query: 85 DMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTT 144
MY++ G + A+ FD++ E+++V ++TMI + LF G + +SWT
Sbjct: 152 QMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYIT---------LFYGFSQRSIVSWTA 202
Query: 145 MITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRND 204
MI G ++ E LF M E + + T S++ +CG + A++ GK++HA+I+RN
Sbjct: 203 MIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNG 262
Query: 205 HKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFC 264
++ + +ALVDMY KC I+ A ++F +M K+V++WTAM+ Y Q C + A ++F
Sbjct: 263 FGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFV 322
Query: 265 NMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCG 324
M+ NG+ P++ T+ S++S CA +L+ G FH G+ + + AL+ Y KCG
Sbjct: 323 QMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCG 382
Query: 325 NIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
+I + RLF+E RD +W +++GY G + + LF +M + G+KP+++T IG L
Sbjct: 383 DISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALH 442
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDA 444
ACS AGLV +G+ FE M+ ++G+ P +HY CM+D+L RAG L+EA I MP P+
Sbjct: 443 ACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNI 502
Query: 445 IGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTM 504
W +L++C+IH N +G+ AA LL L+P N VL+S+IYA+ +W+ V+ +R+ +
Sbjct: 503 AIWGAMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAV 562
Query: 505 REKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVL 564
++ G++K+PG S I+ VH F D + P ++I L ++++K+ + GY+PD S VL
Sbjct: 563 KDTGIKKEPGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVL 622
Query: 565 HDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQRE 624
H+++ EK LN+HSEKLA+AFGL+ PG PIRVVKNLR+C DCH TK +SKI +R
Sbjct: 623 HNIDEEEKETALNYHSEKLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTKLLSKIYKRV 682
Query: 625 ILVRDAVRFHLFKNGECSCGDFW 647
I+VRD RFH F+ G CSCG +W
Sbjct: 683 IIVRDRNRFHHFREGSCSCGGYW 705
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 168/325 (51%), Gaps = 24/325 (7%)
Query: 156 REAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSAL 215
R A++ + MR + +D F SVL AC + GK+IH F ++N +VFV +AL
Sbjct: 91 RYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNAL 150
Query: 216 VDMYCKCKSIKYAESVFRTM------AW----------------KNVVSWTAMLVGYGQN 253
+ MY +C S+ A +F M +W +++VSWTAM+ GY +
Sbjct: 151 MQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRC 210
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVS 313
EE ++F M + P+D T+ S+I SC + +++ G + H L G + ++
Sbjct: 211 NDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALA 270
Query: 314 NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLK 373
ALV YGKCG I + +F+ M +D ++WTA++S YA+ + LF +M +G++
Sbjct: 271 TALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVR 330
Query: 374 PDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKS 433
P+E+T++ +LS C+ G ++ G+ +F + + G+ T +ID+ ++ G + A+
Sbjct: 331 PNELTMVSLLSLCAVNGALDMGK-WFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQR 389
Query: 434 FINKMPFPPDAIGWATLLSSCRIHG 458
++ D W +++ +HG
Sbjct: 390 LFSE-AIDRDICTWNVMMAGYGMHG 413
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 173/346 (50%), Gaps = 34/346 (9%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW +I+G+ + + +++ M+++ + + IT +++I V LG+++H
Sbjct: 198 VSWTAMIAGYIRCNDLEEGERLFVRMIEENVFP-NDITMLSLIISCGFVGAVQLGKRLHA 256
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+IL+ GFG + + + LVDMY K G I A+ FD + K+++ + MI+ + ++
Sbjct: 257 YILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCID- 315
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
A LF +MR G+ ++ T S+L+ C
Sbjct: 316 ------------------------------YAFQLFVQMRDNGVRPNELTMVSLLSLCAV 345
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
AL+ GK HA+I + + +V + +AL+DMY KC I A+ +F +++ +W M
Sbjct: 346 NGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVM 405
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT-G 305
+ GYG +G E+A+K+F M+ G++P+D T + +C++ + EG + + G
Sbjct: 406 MAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFG 465
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSG 350
L+ + +V G+ G +++++++ M V ++ W A+++
Sbjct: 466 LVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAA 511
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 111/253 (43%), Gaps = 46/253 (18%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D ++W +IS +A ++ A +++ M +G+ + +T ++L + + +D+G+
Sbjct: 297 DVMTWTAMISAYAQANCIDYAFQLFVQMRDNGV-RPNELTMVSLLSLCAVNGALDMGKWF 355
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +I K G V + + L+DMYAK G I A+R F E +++I +N M+ G
Sbjct: 356 HAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGY------ 409
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
GM +G +A+ LF EM G+ + TF L AC
Sbjct: 410 --------GM-----------------HGYGEKALKLFTEMETLGVKPNDITFIGALHAC 444
Query: 185 --GGLLALEEG---KQIHAF--IIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM-A 236
GL+ +G K IH F + + +H +VD+ + + A + +M
Sbjct: 445 SHAGLVVEGKGLFEKMIHDFGLVPKVEHY------GCMVDLLGRAGLLDEAYKMIESMPV 498
Query: 237 WKNVVSWTAMLVG 249
N+ W AML
Sbjct: 499 TPNIAIWGAMLAA 511
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/665 (36%), Positives = 386/665 (58%), Gaps = 42/665 (6%)
Query: 23 NDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSP 82
++ V++ M GL S + + + + +G+QIH G FV
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHV-LPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGS 156
Query: 83 LVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMK----DKD 138
+ MY + G + DA++ FD + +K++V + ++ R+G +EE R+ M+ + +
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 139 SISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHA 198
+SW +++G ++G +EA+ +F+++ G DQ T SVL + G L G+ IH
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHG 276
Query: 199 FIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF-------------------------- 232
++I+ + V SA++DMY K + S+F
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDK 336
Query: 233 ----------RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
+TM NVVSWT+++ G QNG EA+++F MQ G++P+ T+ S++
Sbjct: 337 ALEMFELFKEQTMEL-NVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
+C N+A+L G HG ++ L+ + V +AL+ Y KCG I S +FN M ++ V
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV 455
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
W +L++G++ GKA E + +FE ++ LKPD ++ +LSAC + GL ++G YF++M
Sbjct: 456 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Query: 403 VKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
+EYGI+P +HY+CM+++L RAG+L+EA I +MPF PD+ W LL+SCR+ NV++
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 575
Query: 463 GKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKS 522
+ AAE L L+P NP +YVLLS+IYA+KG W V +R M G++K+PGCSWI+ K+
Sbjct: 576 AEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKN 635
Query: 523 RVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEK 582
RV+ A D S P DQI ++++++++M K G+ P++ LHDVE E+ +ML HSEK
Sbjct: 636 RVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEK 695
Query: 583 LAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECS 642
LA+ FGLL P G P++V+KNLR+C DCH K+IS REI +RD RFH FK+G CS
Sbjct: 696 LAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICS 755
Query: 643 CGDFW 647
CGDFW
Sbjct: 756 CGDFW 760
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 193/349 (55%), Gaps = 7/349 (2%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSWN ++SG G +AV ++ + G ++T S++L +++GR IHG
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCP-DQVTVSSVLPSVGDSEMLNMGRLIHG 276
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+++K G V S ++DMY K G +Y F++ + N ITGL R GLV++
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDK 336
Query: 127 SRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
+ +F K++ + +SWT++I G QNG + EA++LFREM++ G+ + T S+L
Sbjct: 337 ALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLP 396
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
ACG + AL G+ H F +R DNV VGSAL+DMY KC I ++ VF M KN+V
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVC 456
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHGRS 301
W +++ G+ +G ++E + IF ++ R ++PD + S++S+C + +EG + F S
Sbjct: 457 WNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMS 516
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVS 349
G+ + + +V G+ G +++++ L EM D W AL++
Sbjct: 517 EEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLN 565
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 114/479 (23%), Positives = 193/479 (40%), Gaps = 103/479 (21%)
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
Q H ILK G + ++ + L+ Y+ DA +P+ I ++++I L +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
L +S I +F M GL D ++
Sbjct: 96 LFTQS-------------------------------IGVFSRMFSHGLIPDSHVLPNLFK 124
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
C L A + GKQIH + + FV ++ MY +C + A VF M+ K+VV+
Sbjct: 125 VCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVT 184
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIE------------------------------ 272
+A+L Y + GC EE V+I M+ +GIE
Sbjct: 185 CSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIH 244
Query: 273 -----PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIE 327
PD T+ SV+ S + L G HG + GL+ V +A++ YGK G++
Sbjct: 245 HLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVY 304
Query: 328 DSHRLFNEMNVRDE-----------------------------------VSWTALVSGYA 352
LFN+ + + VSWT++++G A
Sbjct: 305 GIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCA 364
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
+ GK E ++LF +M G+KP+ VT+ +L AC + GR V+ + + +H
Sbjct: 365 QNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVH 424
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL 471
+ +ID+ ++ GR+ ++ N MP + + W +L++ +HG + ESL+
Sbjct: 425 VG-SALIDMYAKCGRINLSQIVFNMMP-TKNLVCWNSLMNGFSMHGKAKEVMSIFESLM 481
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 88/420 (20%), Positives = 176/420 (41%), Gaps = 61/420 (14%)
Query: 195 QIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNG 254
Q HA I+++ +++ ++ + L+ Y A+ V +++ + S+++++ +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 255 CSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSN 314
+++ +F M +G+ PD L ++ CA L++ + G Q H S V+GL V
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 315 ALVTFYGKCGNIEDSHRLFNEMNVRDE--------------------------------- 341
++ Y +CG + D+ ++F+ M+ +D
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 342 --VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
VSW ++SG+ + G E + +F+K+ G PD+VT+ VL + + ++ GR
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 400 EIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCR---I 456
++K+ G+ + MID+ ++G + S N+ + A + R +
Sbjct: 276 GYVIKQ-GLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 457 HGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKD---- 512
+E+ + E +EL N S+ + + A GK +L R M+ GV+ +
Sbjct: 335 DKALEMFELFKEQTMEL---NVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391
Query: 513 ----PGCSWIK----------YKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVP 558
P C I + RVH+ S D +YA+ ++N I +P
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALID-MYAKCGRINLSQIVFNMMP 450
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 68/167 (40%), Gaps = 2/167 (1%)
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
TQ H R L +G + +S L+ Y D+ + + S+++L+ K
Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKA 94
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
++I +F +M SHGL PD L + C+ + G+ + G+
Sbjct: 95 KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVS-GLDMDAFV 153
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
M + R GR+ +A+ ++M D + + LL + G +E
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMS-DKDVVTCSALLCAYARKGCLE 199
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 239/649 (36%), Positives = 393/649 (60%), Gaps = 35/649 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSS--SRRCV 58
MP + VSW+ L++G+ +G +++ M+ +G N+S + + +SS R V
Sbjct: 92 MPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEG--NVSPNEYILAIAISSCCDRGRV 149
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
+ GRQ HG +LK GF + +V + LV MY+K ++ DA ++E+P +IV YN++++
Sbjct: 150 EEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSS- 208
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
L++NG RE +++ R M E + D+ TF
Sbjct: 209 ------------------------------LVENGYLREGLEVLRSMVSESVKWDKVTFV 238
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
+ + C L L G +H ++ +D + + +V SA+++MY KC A VF + +
Sbjct: 239 NAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSR 298
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
NVV WTA++ QNGC EEA+ +F M++ ++ ++FT ++++CA L++ G+ H
Sbjct: 299 NVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLH 358
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G S +G + V NAL+ Y K G+IE + ++F++M RD ++W A++ G++ G
Sbjct: 359 GHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGK 418
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
+ + +F+ ML+ P+ VT GVLSAC GLV++G +Y ++K++G++P +HYTC+
Sbjct: 419 KALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCI 478
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
+ +LS+ G+L EA++F+ P D + W TLL++C +H N +G+W AE +LE+DP +
Sbjct: 479 VSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDPNDV 538
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
+Y LLS+IYA + +WD V ++R+ MR+K ++K+PG SWI+ + HIF+++D P
Sbjct: 539 GTYTLLSNIYAKEKRWDGVVKVRKLMRDKKIKKEPGVSWIEIGNVTHIFTSEDNKHPDYG 598
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
Q Y ++++L + GY PD+ +VLHDVE +K L++HSEKLAIA+GLL +P I
Sbjct: 599 QTYQKVKELLAMIKPLGYTPDIGAVLHDVEDEQKEYYLSYHSEKLAIAYGLLKLPSEASI 658
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V+KNLR+C DCH+A + ISK+T R I+VRDA RFH F++G CSC D+W
Sbjct: 659 LVIKNLRICDDCHSAVRLISKVTNRVIVVRDANRFHHFRDGRCSCLDYW 707
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/496 (23%), Positives = 231/496 (46%), Gaps = 54/496 (10%)
Query: 31 LMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHIL---KFGFGSYVFVGSPLVDMY 87
L+ + + S + +L +S+ + + +G+ IH H++ + S + V S L++ Y
Sbjct: 18 LLRPNAVSPSSPLDLIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNS-LINFY 76
Query: 88 AKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMIT 147
AK+ + A FD +PE+N+ +SW+ ++T
Sbjct: 77 AKVNQVSIAHNLFDRMPERNV-------------------------------VSWSALMT 105
Query: 148 GLMQNGLEREAIDLFREMRLEG-LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHK 206
G + NG + I L ++M EG ++ +++ +++C +EEG+Q H +++
Sbjct: 106 GYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFS 165
Query: 207 DNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM 266
+ +V +ALV MY KC ++ A V+ + ++V++ ++L +NG E +++ +M
Sbjct: 166 FHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSM 225
Query: 267 QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
++ D T + S CA+L L G HG+ L + + VS+A++ YGKCG
Sbjct: 226 VSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKS 285
Query: 327 EDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSAC 386
+ +F+ + R+ V WTA+++ + G E ++LF KM +K +E T +L+AC
Sbjct: 286 LMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNAC 345
Query: 387 SRAGLVEKGRHYFEIMVKEYGIRPIHDHYT----CMIDILSRAGRLEEAKSFINKMPFPP 442
+ G ++ + + H+ +I++ +++G +E AK + M
Sbjct: 346 AGLSARRNGS-----LLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDM-MHR 399
Query: 443 DAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQ--- 499
D I W ++ HG + + +L + + +YV + + ++ G V +
Sbjct: 400 DIITWNAMICGFSHHGLGKKALLVFQDMLAAEEH--PNYVTFTGVLSACGHLGLVQEGFY 457
Query: 500 -LRRTMREKGVRKDPG 514
L M++ GV+ PG
Sbjct: 458 YLHHLMKQFGVQ--PG 471
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 238/679 (35%), Positives = 390/679 (57%), Gaps = 75/679 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN+++S + G V +A+ + M G+ L T+++ L + +
Sbjct: 250 MPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGV-RLDSTTYTSSLTACARLSSLRW 308
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H +++ +V S LV++YAK
Sbjct: 309 GKQLHAQVIRNLPHIDPYVASALVELYAK------------------------------- 337
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G +E++ +F + D+++++WT +I+G +Q G E+++LF +MR E + +DQF ++
Sbjct: 338 SGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATL 397
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
++ C + L G+Q+H+ +++ V V ++L+ MY KC +++ AE++FR M K++
Sbjct: 398 ISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDI 457
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGI----------------------------- 271
VSWT+M+ Y Q G +A + F M +
Sbjct: 458 VSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSE 517
Query: 272 ---EPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIED 328
PD T ++ CA+L + + G Q GR++ GLI +V+NA++T Y KCG I +
Sbjct: 518 EYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILE 577
Query: 329 SHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
+ ++F+ +NV+D VSW A+++GY++ G + I++F+ +L G KPD ++ + VLS CS
Sbjct: 578 ARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSH 637
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
+GLV++G+ YF++M + + I P +H++CM+D+L RAG L EAK I+ MP P A W
Sbjct: 638 SGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWG 697
Query: 449 TLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
LLS+C+IHGN E+ + AA+ + ELD + SY+L++ IYA GK D +Q+R+ MR+KG
Sbjct: 698 ALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKG 757
Query: 509 VRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVE 568
++K+PG SW++ ++VH+F ADD S P I +L++L K+ + GYV
Sbjct: 758 IKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYVR---------- 807
Query: 569 LSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVR 628
++ + HHSEKLA+AFGL+ +P +PI ++KNLR+C DCH K IS +T RE ++R
Sbjct: 808 -TDSTRSEIHHSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIR 866
Query: 629 DAVRFHLFKNGECSCGDFW 647
DAVRFH F G CSCGD+W
Sbjct: 867 DAVRFHHFNGGSCSCGDYW 885
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 145/500 (29%), Positives = 246/500 (49%), Gaps = 37/500 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SWN L+SG+ +++ + M + G + T + + + L
Sbjct: 117 MPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSL 176
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
Q+ + KF V + LVDM+ + G + A R F + E + N+M+ G ++
Sbjct: 177 ALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVK 236
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
V+ + LF M ++D +SW M++ L Q+G REA+D+ +M+ +G+ +D T+ S
Sbjct: 237 TYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSS 296
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LTAC L +L GKQ+HA +IRN + +V SALV++Y K K A+ VF ++ +N
Sbjct: 297 LTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNN 356
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+WT ++ G+ Q GC E+V++F M+ + D F L ++IS C + L G Q H
Sbjct: 357 VAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSL 416
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
L +G I + VSN+L++ Y KC N++ + +F MN +D VSWT++++ Y++ G +
Sbjct: 417 CLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKA 476
Query: 361 IDLFEKM---------------LSHG-----------------LKPDEVTLIGVLSACSR 388
+ F+ M + HG ++PD VT + + C+
Sbjct: 477 REFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCAD 536
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
G + G VK G+ +I + S+ GR+ EA+ + + D + W
Sbjct: 537 LGANKLGDQIIGRTVK-VGLIIDTSVANAVITMYSKCGRILEARKVFDFLNV-KDIVSWN 594
Query: 449 TLLSSCRIHGNVEIGKWAAE 468
+++ HG +GK A E
Sbjct: 595 AMITGYSQHG---MGKQAIE 611
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 131/533 (24%), Positives = 246/533 (46%), Gaps = 55/533 (10%)
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF-DELPEKNIVMYNTMITGLLRRGL 123
HG ++ G S VF+ + L+ Y G + DA+R ++ N++ +N M+ G + G
Sbjct: 47 HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGR 106
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM-DQFTFGSVLT 182
+ ++ LF M +D SW T+++G Q+ +++ F M G + + FT +
Sbjct: 107 LSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMK 166
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS------------------ 224
+CG L Q+ A + + D +D+ V +ALVDM+ +C +
Sbjct: 167 SCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFC 226
Query: 225 -------------IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGI 271
+ +A +F +M ++VVSW M+ Q+G EA+ + +MQ G+
Sbjct: 227 RNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGV 286
Query: 272 EPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHR 331
D T S +++CA L+SL G Q H + + V++ALV Y K G +++
Sbjct: 287 RLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKG 346
Query: 332 LFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGL 391
+FN ++ R+ V+WT L+SG+ ++G E+++LF +M + + D+ L ++S C
Sbjct: 347 VFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMD 406
Query: 392 VEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
+ GR + +K I+ + + +I + ++ L+ A++ M D + W +++
Sbjct: 407 LCLGRQLHSLCLKSGQIQAVVVSNS-LISMYAKCDNLQSAEAIFRFMN-EKDIVSWTSMI 464
Query: 452 SSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKG-KWDHVSQLRRTMREKGVR 510
++ GNV + E + N ++ + Y G + D + + + E+ VR
Sbjct: 465 TAYSQVGNVAKAR---EFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVR 521
Query: 511 KDPGCSWIKYKSRVHIFS--ADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMS 561
D W+ Y V +F AD ++ DQI + +K G + D S
Sbjct: 522 PD----WVTY---VTLFKGCADLGANKLGDQIIG-------RTVKVGLIIDTS 560
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 252/649 (38%), Positives = 378/649 (58%), Gaps = 20/649 (3%)
Query: 4 HDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG-- 61
H SW I AS G A+ ++ L ++ + S + S + ++ + C LG
Sbjct: 10 HFPPSWAYQIRMAASQGQFLHAISLF-LQMRASVAPRSSVPAS---LPAALKSCAGLGLC 65
Query: 62 ---RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
+H ++ G + F + L+++ KL GF N G
Sbjct: 66 TLAASLHALAIRSGSFADRFTANALLNLCIKLP-------GFHHPFGTN----GPSGEGG 114
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
L E R++F M ++D++SW T+I G ++ +EA+ + REM +G D FT
Sbjct: 115 LESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLS 174
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
+VL ++ G +H + I+N ++VFVGS+L+DMY C + Y+ VF + +
Sbjct: 175 TVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDC 234
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+ V W +ML GY QNG EEA+ IF M + G+ P T S+I + NL+ L G Q H
Sbjct: 235 DAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLH 294
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
+ I +S++L+ Y KCGN++ + R+FN + D VSWTA++ GYA G
Sbjct: 295 AYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTT 354
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
E LFE+M +KP+ +T + VL+ACS AGLV+ G YF M +YG P +H +
Sbjct: 355 EAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAAL 414
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
D L RAG L+EA +FI++M P + W+TLL +CR+H N + + A+ + EL+P +
Sbjct: 415 ADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSM 474
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
S+V+LS++Y++ G+W+ +QLR++MR KG++K+P CSWI+ K+++H+F A D S P+ D
Sbjct: 475 GSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYD 534
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
+I L + +MI++GYVP+M VL D+E +K ++L HSEKLAI FG++ PPG I
Sbjct: 535 RIIDALNVYSEQMIRQGYVPNMEDVLQDIEEEQKREVLCGHSEKLAIVFGIISTPPGTTI 594
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RV+KNLRVC DCH ATK+ISKI REI+VRD RFH FK+G CSCGDFW
Sbjct: 595 RVMKNLRVCVDCHIATKFISKIVAREIVVRDVNRFHRFKDGNCSCGDFW 643
>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
gi|194695290|gb|ACF81729.1| unknown [Zea mays]
Length = 539
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 226/537 (42%), Positives = 345/537 (64%)
Query: 111 YNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL 170
+N +I G ++ G +E +R+LF M ++ +W M+ GL +GL E++ F MR EG+
Sbjct: 3 WNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGM 62
Query: 171 AMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAES 230
D++ GS+ C GL + G+Q+HA+++R+ ++ VGS+L MY +C ++ E+
Sbjct: 63 QPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEA 122
Query: 231 VFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS 290
R + N+VS + G QNG +E A++ FC M+ G+E + T S ++SC++LA+
Sbjct: 123 ALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAA 182
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
L +G Q H ++ TG+ + V +LV Y +CG + DS R+ E + D V +A++S
Sbjct: 183 LAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISA 242
Query: 351 YAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP 410
Y G + + LF++M++ G +P+EVT + +L ACS +GL ++G + FE+M K YG++P
Sbjct: 243 YGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQP 302
Query: 411 IHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL 470
HYTC++D+L R+G L EA+ I MP PD + W TLLS+C+ ++ + AE +
Sbjct: 303 SVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERV 362
Query: 471 LELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSAD 530
+ELDP++ ASYVLLS+I A+ +W+ VS++R TMRE+ VRK+PG SW++ K ++H F
Sbjct: 363 IELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTG 422
Query: 531 DWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLL 590
D S +I LE++ ++ + GY PDMS V HD+E EK L HHSEKLAIAF L
Sbjct: 423 DESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFL 482
Query: 591 FIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+P G+PIRV+KNLRVC DCH A K +SK+ REI+VRD RFH FK+G+CSCGD+W
Sbjct: 483 SLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 539
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/462 (25%), Positives = 200/462 (43%), Gaps = 55/462 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +WN +++G + G +++ + M ++G+ ++ + R V
Sbjct: 26 MPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGM-QPDEYGLGSLFRCCAGLRDVVS 84
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H ++++ G + VGS L MY + G + D + LP NIV NT
Sbjct: 85 GRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNT------- 137
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
I+G QNG A++ F MR G+ + TF S
Sbjct: 138 ------------------------TISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSA 173
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+T+C L AL +G+QIHA I+ V V ++LV MY +C + +E V + ++
Sbjct: 174 VTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDL 233
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
V +AM+ YG +G ++AV +F M G EP++ T +++ +C++ +EG F
Sbjct: 234 VLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFEL 293
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKAN 358
+ GL + +V G+ G + ++ L M V+ D V W L+S K
Sbjct: 294 MTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSAC----KTQ 349
Query: 359 ETIDLFEKMLSHGLKPDE------VTLIGVLSACSRAGLVEKGRHYF--EIMVKEYGIRP 410
+ D+ E++ ++ D V L + + SR V K R + + KE G+
Sbjct: 350 KKFDMAERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSW 409
Query: 411 I----HDHYTCMIDILSRAGR-----LEEAKSFINKMPFPPD 443
+ H C D R LEE + I + + PD
Sbjct: 410 VELKGQIHQFCTGDESHSRQREIVECLEEMMTRIRQCGYAPD 451
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 247/641 (38%), Positives = 403/641 (62%), Gaps = 11/641 (1%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN + GHA A+K+Y +M+ GL S TF +L + + G+QIHGH+
Sbjct: 57 WNTMFRGHALSSDPVSALKLYLVMISLGLLPDS-YTFPFLLKSCAKSKIRKEGQQIHGHV 115
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
LK GF ++V + L+ MYA+ G + DA++ FD +++V Y +I G + RG +E ++
Sbjct: 116 LKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQ 175
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL-EGLAMDQFTFGSVLTACGGL 187
+LF + KD +SW MI+G ++ G +EA++LF+EM + + D+ T +V++AC
Sbjct: 176 KLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQS 235
Query: 188 LALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
++E G+ +H++I NDH N+ + +AL+D+Y K ++ A +F + K+V+SW
Sbjct: 236 DSIELGRHVHSWI--NDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNT 293
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH---GRSL 302
++ GY +EA+ +F M R+G P+D T+ S++ +CA+L +++ G H + L
Sbjct: 294 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKL 353
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNE-MNVRDEVSWTALVSGYAKFGKANETI 361
+ + ++ +L+ Y KCG+I+ + ++F+ M+ R +W A++SG+A G+AN
Sbjct: 354 KGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAF 413
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
D+F +M +G++PD++T +G+LSACS +G+++ GR+ F M + Y I P +HY CMID+
Sbjct: 414 DIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDL 473
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
L +G +EA+ IN MP PD + W +LL +C+IHGN+E+G+ A+ L++++P N SY
Sbjct: 474 LGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSY 533
Query: 482 VLLSSIYASKGKWDHVSQLRRTMREKGVRKD-PGCSWIKYKSRVHIFSADDWSSPYSDQI 540
VLLS+IYA+ G+W+ V+++R + +KG++K PGCS I+ S VH F D P + +I
Sbjct: 534 VLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREI 593
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y LE++ + + G+VPD S VL ++E + L HHSEKLAIAFGL+ PG + +
Sbjct: 594 YGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWREGALRHHSEKLAIAFGLISTKPGTKLTI 653
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGEC 641
+KNLRVC +CH ATK ISKI +REI+ RD RF F++G C
Sbjct: 654 MKNLRVCKNCHEATKLISKIYKREIIARDRTRFXHFRDGVC 694
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 196/436 (44%), Gaps = 72/436 (16%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYD----AKRGFDELPEKNIVMYNTMITG 117
R IH ++K G + + S L++ + + +D A FD + E N++++NTM
Sbjct: 5 RXIHAQMIKTGLHNTNYALSKLLE-FCVVSPHFDGFPYAISVFDTIQEPNLLIWNTM--- 60
Query: 118 LLRRGLVEESRRLFRGMK-DKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
FRG D +S A+ L+ M GL D +T
Sbjct: 61 -------------FRGHALSSDPVS----------------ALKLYLVMISLGLLPDSYT 91
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS------------ 224
F +L +C +EG+QIH +++ +++V ++L+ MY +
Sbjct: 92 FPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISS 151
Query: 225 -------------------IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCN 265
I+ A+ +F + K+VVSW AM+ GY + G +EA+++F
Sbjct: 152 HRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKE 211
Query: 266 -MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCG 324
M + PD+ T+ +V+S+CA S+E G H G S + + NAL+ Y K G
Sbjct: 212 MMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFG 271
Query: 325 NIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
+E + LF+ + +D +SW L+ GY E + LF++ML G P++VT++ +L
Sbjct: 272 EVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 331
Query: 385 ACSRAGLVEKGRHYFEIMVKEYG--IRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPP 442
AC+ G ++ GR + K+ + + T +ID+ ++ G ++ A+ +
Sbjct: 332 ACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNR 391
Query: 443 DAIGWATLLSSCRIHG 458
W ++S +HG
Sbjct: 392 SLSTWNAMISGFAMHG 407
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 198/437 (45%), Gaps = 76/437 (17%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VSWN +ISG+ G+ +A++++ M+ T T++ + ++L
Sbjct: 181 IPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIEL 240
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +H I GF S + + + L+D+Y+K G + A FD L K+++ +NT+I G
Sbjct: 241 GRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGG--- 297
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+T M L +EA+ LF+EM G + T S+
Sbjct: 298 ---------------------YTHM-------NLYKEALLLFQEMLRSGETPNDVTMLSI 329
Query: 181 LTACGGLLALEEGKQIHAFI---IRNDHKDNVFVGSALVDMYCKCKSIKYAESVF-RTMA 236
L AC L A++ G+ IH +I ++ + + ++L+DMY KC I A+ VF +M+
Sbjct: 330 LPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMS 389
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
+++ +W AM+ G+ +G + A IF M+ NGIEPDD T ++S+C++ L+ G
Sbjct: 390 NRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRN 449
Query: 297 FHGRSLVTG--LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
RS+ G + + ++ G G +++ + N M
Sbjct: 450 IF-RSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTM------------------ 490
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD- 413
++PD V +L AC G +E G + + ++K I P +
Sbjct: 491 ----------------PMEPDGVIWCSLLKACKIHGNLELGESFAKKLIK---IEPGNSG 531
Query: 414 HYTCMIDILSRAGRLEE 430
Y + +I + AGR E
Sbjct: 532 SYVLLSNIYAAAGRWNE 548
>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
Length = 631
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 253/641 (39%), Positives = 374/641 (58%), Gaps = 33/641 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V+W LISG +G + A+ ++ M ++ + + TF S++ G+QIH
Sbjct: 24 VTWTALISGSVQNGYFSSALLYFSKMRRENI-KPNDFTFPCAFKASTALCLPFAGKQIHA 82
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
LK G + FVG DMY+K GL + E
Sbjct: 83 IALKLGQINDKFVGCSAFDMYSKTGLKF-------------------------------E 111
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
++RLF M ++ W I+ + +G +AID F E R G D TF + L AC
Sbjct: 112 AQRLFDEMPPRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACAD 171
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L+ G+Q+H +IR+ + +V V + ++D+Y KCK ++ AE VF M +N VSW M
Sbjct: 172 ARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTM 231
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ QN E+A +F ++ GIE D+ + SVIS+ A ++ LE G H ++ +
Sbjct: 232 VAACEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACV 291
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
I V +ALV YGKCG+IED ++F+EM R+ VSW A++SGYA G + + LFE+
Sbjct: 292 EGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEE 351
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M S + + VTLI VLSACSR G V+ G FE M Y I P +HY C+ D+L RAG
Sbjct: 352 MQSEAVA-NYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAG 410
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+E A F+ KMP P W LL++CR++G E+GK AA++L +LDP + ++VLLS+
Sbjct: 411 MVERAYEFVQKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLDPKDSGNHVLLSN 470
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
++A+ G+WD + +R+ M++ G++K GCSW+ K++VH+F A D S + +I A L K
Sbjct: 471 MFAAAGRWDEATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKDTSHERNSEIQAMLVK 530
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
L +M GY+PD + L+D+E EK+ + +HSEK+A+AFGL+ +PPG+PIR+ KNLR+
Sbjct: 531 LRTEMQAAGYMPDTNYALYDLEEEEKMTEVGYHSEKIALAFGLIALPPGVPIRITKNLRI 590
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCH+A K+IS I REI+VRD RFH F++ +CSC DFW
Sbjct: 591 CGDCHSAFKFISGIVGREIIVRDNNRFHRFRDSQCSCRDFW 631
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 111/237 (46%), Gaps = 2/237 (0%)
Query: 218 MYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFT 277
MY K A+ + + + VV+WTA++ G QNG A+ F M+R I+P+DFT
Sbjct: 1 MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60
Query: 278 LGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN 337
+ L G Q H +L G I+ V + Y K G ++ RLF+EM
Sbjct: 61 FPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMP 120
Query: 338 VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH 397
R+ W A +S G+ + ID F + G +PD +T L+AC+ A ++ GR
Sbjct: 121 PRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQ 180
Query: 398 YFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
++++ G +ID+ + +E A+ N M +++ W T++++C
Sbjct: 181 LHGLVIRS-GFEGDVSVANGIIDVYGKCKEVELAEMVFNGMG-RRNSVSWCTMVAAC 235
>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Vitis vinifera]
gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
Length = 880
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 248/644 (38%), Positives = 379/644 (58%), Gaps = 43/644 (6%)
Query: 4 HDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQ 63
+D W +ISG +A+ ++ M G+ + T+S +L SS +DLG+Q
Sbjct: 280 YDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVP-NNFTYSGILNACSSILALDLGKQ 338
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
IH ++ G + V VG+ LVDMY K +
Sbjct: 339 IHSRVVMAGLENDVSVGNSLVDMYMKCS------------------------------NM 368
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
+E++ R FRG+ + ISWT++I G ++GLE E+I +F M+ G+ + FT ++L A
Sbjct: 369 IEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGA 428
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
CG + +L + +++H +II+N+ ++V VG+ALVD Y + A V M ++V+++
Sbjct: 429 CGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITY 488
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
T++ Q G E A+ I +M ++ + D F+L S +S+ A + +E G Q H S+
Sbjct: 489 TSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVK 548
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
+GL S+I+VSN LV YGKCG I D+HR F E+ D VSW L+ G A G + +
Sbjct: 549 SGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSSALSA 608
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
FE M G++PD++T + VL ACS GLV+ G YF+ M +++GIRP DHY C++D+L
Sbjct: 609 FEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYVCLVDLLG 668
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
RAGRLEEA + I MPF PDA+ + TLL +C++HGN+ +G+ A LELDP +PA YVL
Sbjct: 669 RAGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNIPLGEHMARQGLELDPSDPAFYVL 728
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
L+++Y G+ + + RR MRE+GVRK+PG SW++ ++ VH+F+A D S P +I+ +
Sbjct: 729 LANLYDDSGRSELGEKTRRMMRERGVRKNPGQSWMEERNMVHLFTAGDTSHPQIGKIHEK 788
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
+E L + +G ++ + L HHSEKLA+AFGL+ PP PIR++KN
Sbjct: 789 IESLIAQFRNQGI------------WYQENRALAHHSEKLAVAFGLISTPPKAPIRIIKN 836
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+R+C DCH+ ++++ REI+VRD RFH FK GECSC +W
Sbjct: 837 IRICRDCHDFIMNVTRLVDREIIVRDGNRFHSFKKGECSCRGYW 880
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 147/511 (28%), Positives = 255/511 (49%), Gaps = 42/511 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW +++S GS + A+++Y+ M++ G+ + TF L+ +SS ++ G+ +
Sbjct: 181 DIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAP-NEFTF-VKLLAASSFLGLNYGKLV 238
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H H++ + + + + LVDMY K I DA V
Sbjct: 239 HAHLMMWRIELNLVLKTALVDMYCKCQSIEDA---------------------------V 271
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ S+ + D WT +I+G Q+ REAI F EM G+ + FT+ +L AC
Sbjct: 272 KVSKLTL----EYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNAC 327
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS-IKYAESVFRTMAWKNVVSW 243
+LAL+ GKQIH+ ++ +++V VG++LVDMY KC + I+ A FR +A NV+SW
Sbjct: 328 SSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISW 387
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
T+++ G+ ++G EE++K+F MQ G+ P+ FTL +++ +C + SL + + HG +
Sbjct: 388 TSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIK 447
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
+ + V NALV Y G ++D+ + + M RD +++T+L + + G +++
Sbjct: 448 NNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNI 507
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
M ++ D +L LSA + ++E G+ VK G+ ++D+
Sbjct: 508 ITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKS-GLGSWISVSNGLVDLYG 566
Query: 424 RAGRLEEA-KSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYV 482
+ G + +A +SF+ PDA+ W L+ +G+V A E + L P
Sbjct: 567 KCGCIHDAHRSFLEIT--EPDAVSWNGLIFGLASNGHVSSALSAFED-MRLAGVEPDQIT 623
Query: 483 LLSSIYASK--GKWDHVSQLRRTMREK-GVR 510
L +YA G D ++MREK G+R
Sbjct: 624 CLLVLYACSHGGLVDMGLDYFQSMREKHGIR 654
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 134/464 (28%), Positives = 236/464 (50%), Gaps = 36/464 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SW +L+S + G+ +A+++++ ML G + T ST L S+ R +
Sbjct: 76 MPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISG-EYPNEFTLSTALRSCSALREFNH 134
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G + + K GF S +GS L+D Y+K G
Sbjct: 135 GTRFQALVTKSGFDSNPVLGSALIDFYSKCGC---------------------------- 166
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+E+ R+F M + D +SWT M++ ++ G +A+ L+ M G+A ++FTF +
Sbjct: 167 ---TQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKL 223
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A L L GK +HA ++ + N+ + +ALVDMYCKC+SI+ A V + +V
Sbjct: 224 LAA-SSFLGLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDV 282
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
WTA++ G+ Q+ EA+ F M+ +G+ P++FT ++++C+++ +L+ G Q H R
Sbjct: 283 FLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSR 342
Query: 301 SLVTGLISFITVSNALVTFYGKCGN-IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
++ GL + ++V N+LV Y KC N IED+ R F + + +SWT+L++G+++ G E
Sbjct: 343 VVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEE 402
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+I +F M G++P+ TL +L AC + + R ++K + ++
Sbjct: 403 SIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVG-NALV 461
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
D + G +++A + M D I + +L + GN E+
Sbjct: 462 DAYAGLGMVDDAWHVTSMMKH-RDVITYTSLATRINQTGNHEMA 504
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/465 (25%), Positives = 213/465 (45%), Gaps = 39/465 (8%)
Query: 41 SRITFSTM--LIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAK-LGLIYDAK 97
S+I +S + ++ + R V G IH I+K GF +F+ + L+ +Y K G
Sbjct: 12 SKIEYSLLKDIVSFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFG------ 65
Query: 98 RGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLERE 157
V E+R+LF M +D SWT +++ + G E
Sbjct: 66 --------------------------VAEARQLFDEMPCRDVASWTMLMSAYGKIGNHEE 99
Query: 158 AIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVD 217
A++LF M + G ++FT + L +C L G + A + ++ N +GSAL+D
Sbjct: 100 ALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALID 159
Query: 218 MYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFT 277
Y KC + A VF M ++VSWT M+ + + G +A++++ M + G+ P++FT
Sbjct: 160 FYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFT 219
Query: 278 LGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN 337
++++ + L L G H ++ + + + ALV Y KC +IED+ ++
Sbjct: 220 FVKLLAASSFLG-LNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTL 278
Query: 338 VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH 397
D WTA++SG+ + K E I F +M + G+ P+ T G+L+ACS ++ G+
Sbjct: 279 EYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQ 338
Query: 398 YFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIH 457
+V G+ ++D+ + + E + P+ I W +L++ H
Sbjct: 339 IHSRVVMA-GLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEH 397
Query: 458 GNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRR 502
G +E ++ P S+ LS+I + G ++Q R+
Sbjct: 398 G-LEEESIKVFGAMQGVGVRPNSFT-LSTILGACGTIKSLTQTRK 440
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 121/282 (42%), Gaps = 50/282 (17%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +++ L + G+ A+ + M KD + + + ++ L ++ ++
Sbjct: 480 MKHRDVITYTSLATRINQTGNHEMALNIITHMNKDDV-RMDGFSLASFLSAAAGIPIMET 538
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H + +K G GS++ V + LVD+Y K G I+DA R F E+ E + V +N +I G
Sbjct: 539 GKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFG--- 595
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
L NG A+ F +MRL G+ DQ T V
Sbjct: 596 ----------------------------LASNGHVSSALSAFEDMRLAGVEPDQITCLLV 627
Query: 181 LTAC--GGLLAL-----EEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
L AC GGL+ + + ++ H + DH LVD+ + ++ A +V
Sbjct: 628 LYACSHGGLVDMGLDYFQSMREKHGIRPQLDHY------VCLVDLLGRAGRLEEAMNVIE 681
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEA-VKIFCNMQRNGIEPD 274
TM +K L+G C + + +M R G+E D
Sbjct: 682 TMPFKPDALIYKTLLG----ACKLHGNIPLGEHMARQGLELD 719
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 238/679 (35%), Positives = 390/679 (57%), Gaps = 75/679 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN+++S + G V +A+ + M G+ L T+++ L + +
Sbjct: 230 MPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGV-RLDSTTYTSSLTACARLSSLRW 288
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H +++ +V S LV++YAK
Sbjct: 289 GKQLHAQVIRNLPHIDPYVASALVELYAK------------------------------- 317
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G +E++ +F + D+++++WT +I+G +Q G E+++LF +MR E + +DQF ++
Sbjct: 318 SGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATL 377
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
++ C + L G+Q+H+ +++ V V ++L+ MY KC +++ AE++FR M K++
Sbjct: 378 ISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDI 437
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGI----------------------------- 271
VSWT+M+ Y Q G +A + F M +
Sbjct: 438 VSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSE 497
Query: 272 ---EPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIED 328
PD T ++ CA+L + + G Q GR++ GLI +V+NA++T Y KCG I +
Sbjct: 498 EYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILE 557
Query: 329 SHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
+ ++F+ +NV+D VSW A+++GY++ G + I++F+ +L G KPD ++ + VLS CS
Sbjct: 558 ARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSH 617
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
+GLV++G+ YF++M + + I P +H++CM+D+L RAG L EAK I+ MP P A W
Sbjct: 618 SGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWG 677
Query: 449 TLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
LLS+C+IHGN E+ + AA+ + ELD + SY+L++ IYA GK D +Q+R+ MR+KG
Sbjct: 678 ALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKG 737
Query: 509 VRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVE 568
++K+PG SW++ ++VH+F ADD S P I +L++L K+ + GYV
Sbjct: 738 IKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYVR---------- 787
Query: 569 LSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVR 628
++ + HHSEKLA+AFGL+ +P +PI ++KNLR+C DCH K IS +T RE ++R
Sbjct: 788 -TDSTRSEIHHSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIR 846
Query: 629 DAVRFHLFKNGECSCGDFW 647
DAVRFH F G CSCGD+W
Sbjct: 847 DAVRFHHFNGGSCSCGDYW 865
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 145/500 (29%), Positives = 246/500 (49%), Gaps = 37/500 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SWN L+SG+ +++ + M + G + T + + + L
Sbjct: 97 MPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSL 156
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
Q+ + KF V + LVDM+ + G + A R F + E + N+M+ G ++
Sbjct: 157 ALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVK 216
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
V+ + LF M ++D +SW M++ L Q+G REA+D+ +M+ +G+ +D T+ S
Sbjct: 217 TYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSS 276
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LTAC L +L GKQ+HA +IRN + +V SALV++Y K K A+ VF ++ +N
Sbjct: 277 LTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNN 336
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+WT ++ G+ Q GC E+V++F M+ + D F L ++IS C + L G Q H
Sbjct: 337 VAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSL 396
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
L +G I + VSN+L++ Y KC N++ + +F MN +D VSWT++++ Y++ G +
Sbjct: 397 CLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKA 456
Query: 361 IDLFEKM---------------LSHG-----------------LKPDEVTLIGVLSACSR 388
+ F+ M + HG ++PD VT + + C+
Sbjct: 457 REFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCAD 516
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
G + G VK G+ +I + S+ GR+ EA+ + + D + W
Sbjct: 517 LGANKLGDQIIGRTVK-VGLIIDTSVANAVITMYSKCGRILEARKVFDFLNV-KDIVSWN 574
Query: 449 TLLSSCRIHGNVEIGKWAAE 468
+++ HG +GK A E
Sbjct: 575 AMITGYSQHG---MGKQAIE 591
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 131/533 (24%), Positives = 246/533 (46%), Gaps = 55/533 (10%)
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF-DELPEKNIVMYNTMITGLLRRGL 123
HG ++ G S VF+ + L+ Y G + DA+R ++ N++ +N M+ G + G
Sbjct: 27 HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGR 86
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM-DQFTFGSVLT 182
+ ++ LF M +D SW T+++G Q+ +++ F M G + + FT +
Sbjct: 87 LSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMK 146
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS------------------ 224
+CG L Q+ A + + D +D+ V +ALVDM+ +C +
Sbjct: 147 SCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFC 206
Query: 225 -------------IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGI 271
+ +A +F +M ++VVSW M+ Q+G EA+ + +MQ G+
Sbjct: 207 RNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGV 266
Query: 272 EPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHR 331
D T S +++CA L+SL G Q H + + V++ALV Y K G +++
Sbjct: 267 RLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKG 326
Query: 332 LFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGL 391
+FN ++ R+ V+WT L+SG+ ++G E+++LF +M + + D+ L ++S C
Sbjct: 327 VFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMD 386
Query: 392 VEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
+ GR + +K I+ + + +I + ++ L+ A++ M D + W +++
Sbjct: 387 LCLGRQLHSLCLKSGQIQAVVVSNS-LISMYAKCDNLQSAEAIFRFMN-EKDIVSWTSMI 444
Query: 452 SSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKG-KWDHVSQLRRTMREKGVR 510
++ GNV + E + N ++ + Y G + D + + + E+ VR
Sbjct: 445 TAYSQVGNVAKAR---EFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVR 501
Query: 511 KDPGCSWIKYKSRVHIFS--ADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMS 561
D W+ Y V +F AD ++ DQI + +K G + D S
Sbjct: 502 PD----WVTY---VTLFKGCADLGANKLGDQIIG-------RTVKVGLIIDTS 540
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 242/605 (40%), Positives = 368/605 (60%), Gaps = 33/605 (5%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
+ ++L S+R + G+++H H++K + V++ + L+ +Y K + DA+ FDE+P
Sbjct: 65 YDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMP 124
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
++N+V SWT MI+ Q G EA++LF E
Sbjct: 125 QRNVV-------------------------------SWTAMISAYSQRGFAFEALNLFVE 153
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M + FTF ++LT+C G L E G+QIH+ I+ +++ ++FVGS+L+DMY K
Sbjct: 154 MLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGR 213
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
I A VF + ++VV+ TA++ GY Q G EEA+K+F +Q G+ + T SV+++
Sbjct: 214 ICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTA 273
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
+ LA+L G Q H L +G S++ + N+L+ Y KCGN+ + R+F+ M R +SW
Sbjct: 274 LSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISW 333
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
A++ GY+K G A E ++LF+ M +KPD +T + VLS CS L + G F MV
Sbjct: 334 NAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMV 393
Query: 404 K-EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
+ GI P HY C++D+L RAGR+EEA FI KMPF P A W +LL SCR+H +VEI
Sbjct: 394 NGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEI 453
Query: 463 GKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKS 522
G + LLEL+P N +YV+LS++YAS GKW+ + +R M+EK V K+PG SW++
Sbjct: 454 GIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQ 513
Query: 523 RVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEK 582
VH F A D + P +++ ++++L+ K ++GYVPD+S VL+DV+ +K K+L HSEK
Sbjct: 514 IVHTFHASDHTHPRREEVANKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEK 573
Query: 583 LAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECS 642
LA+AFGL+ P G IRV+KNLR+C DCH+ K++S++ R +++RD RFH G CS
Sbjct: 574 LALAFGLIATPEGTTIRVIKNLRICVDCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCS 633
Query: 643 CGDFW 647
CGD+W
Sbjct: 634 CGDYW 638
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 203/418 (48%), Gaps = 61/418 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW +IS ++ G +A+ ++ ML+ + TF+T+L +
Sbjct: 123 MPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDT-EPNHFTFATILTSCYGSLGFET 181
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQIH +K + S++FVGS L+DMYAK G I DA F LPE+++V +I+G +
Sbjct: 182 GRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQ 241
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL EE+ +LF R++++EG+ + T+ SV
Sbjct: 242 MGLDEEALKLF-------------------------------RQLQIEGMNSNSVTYASV 270
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LTA GL AL GKQ+H+ ++R+ V + ++L+DMY KC ++ YA +F +M +
Sbjct: 271 LTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTC 330
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+SW AMLVGY ++G + E +++F M + N ++PD T +V+S C+ HG
Sbjct: 331 ISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCS-----------HG 379
Query: 300 RSLVTGLISFITVSNA-------------LVTFYGKCGNIEDSHRLFNEMN-VRDEVSWT 345
+ GL F + N +V G+ G +E++ +M V W
Sbjct: 380 QLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWG 439
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSAC-SRAGLVEKGRHYFEIM 402
+L+ I + +K+L L+P+ +LS + AG E R+ ++M
Sbjct: 440 SLLGSCRVHSDVEIGIIVGQKLLE--LEPENAGNYVILSNLYASAGKWEDMRNIRDLM 495
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 247/643 (38%), Positives = 381/643 (59%), Gaps = 32/643 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW +I+ +A + ++A++ ++ M G + TF+ +L + D G+ +
Sbjct: 111 DMVSWTGMIASYAENDCFSEALEFFSQMRVAGF-KPNNFTFAGVLKACLGLQNFDAGKTV 169
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +LK + ++VG L+++Y + G DA R F ++P+
Sbjct: 170 HCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKN------------------ 211
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
D I W+ MI+ Q+G +A+++F +MR + +QFTF SVL A
Sbjct: 212 -------------DVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQAS 258
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+ +L+ K IH ++ +VFV +AL+ Y KC I+ + +F ++ +N VSW
Sbjct: 259 ADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWN 318
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++V Y Q G E A+ +F NM R ++ + T S++ +CA LA+LE G Q H + T
Sbjct: 319 TIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKT 378
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
+ V NAL+ Y KCG+I+D+ +F+ +++RD+VSW A++ GY+ G E I +F
Sbjct: 379 IYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMF 438
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
M KPDE+T +GVLSACS G +++G+ YF M ++YGI P +HYTCM+ ++ R
Sbjct: 439 NLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGR 498
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
+G L++A FI +PF P + W LL +C IH +VE+G+ +A+ +LEL+P + AS+VLL
Sbjct: 499 SGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRISAQRVLELEPRDEASHVLL 558
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S+IYA +W +V+ +R+ M+ KGV+K+PG SWI+ + VH F+ D S I L
Sbjct: 559 SNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHCFTVADTSHADLKLINGML 618
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
E LN K K GY P +++VL DVE EK ++L HSE+LA+AFGL+ +P G PIR++KNL
Sbjct: 619 EFLNMKTRKAGYSPQLNAVLLDVEDDEKERLLWLHSERLALAFGLVRMPAGCPIRIIKNL 678
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R+C DCH+ K ISKI R+I+VRD RFH F+NG CSC D+W
Sbjct: 679 RICVDCHSVIKLISKIVGRDIIVRDMNRFHHFENGSCSCADYW 721
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 140/459 (30%), Positives = 236/459 (51%), Gaps = 36/459 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VS+ LI G+A +A +++ + +G L+ F+T+L + S +L
Sbjct: 6 MPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEG-HELNPFVFTTVLKLLVSMEWAEL 64
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +HG +LK G+GS F+G+ L+D Y+ G + A+ FDE+ K
Sbjct: 65 GRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSK-------------- 110
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
D +SWT MI +N EA++ F +MR+ G + FTF V
Sbjct: 111 -----------------DMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGV 153
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC GL + GK +H +++ +++ +++VG L+++Y +C A F M +V
Sbjct: 154 LKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDV 213
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+ W+ M+ + Q+G SE+A++IFC M+R + P+ FT SV+ + A++ SL+ HG
Sbjct: 214 IPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGH 273
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+L GL + + VSNAL+ Y KCG IE S LF ++ R++VSW ++ Y + G
Sbjct: 274 ALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERA 333
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE-YGIRPIHDHYTCMI 419
+ LF ML + ++ EVT +L AC+ +E G + K YG + +I
Sbjct: 334 LSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGN--ALI 391
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
D+ ++ G +++A+ F+ M D + W ++ +HG
Sbjct: 392 DMYAKCGSIKDAR-FMFDMLDLRDKVSWNAIICGYSMHG 429
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 139/256 (54%)
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
+F M +++++S+ T+I G Q+ EA +LF + EG ++ F F +VL +
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
E G+ +H +++ + N F+G+AL+D Y + A VF ++ K++VSWT M+
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
Y +N C EA++ F M+ G +P++FT V+ +C L + + G H L T
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERD 181
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
+ V L+ Y +CG+ +D+ R F +M D + W+ ++S +A+ G++ + +++F +M
Sbjct: 182 LYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRR 241
Query: 370 HGLKPDEVTLIGVLSA 385
+ P++ T VL A
Sbjct: 242 AFVIPNQFTFSSVLQA 257
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 109/231 (47%), Gaps = 2/231 (0%)
Query: 231 VFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS 290
VF M +N VS+ ++ GY Q+ EA ++F + G E + F +V+ ++
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
E G HG L G S + AL+ Y G + + +F+E++ +D VSWT +++
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121
Query: 351 YAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP 410
YA+ +E ++ F +M G KP+ T GVL AC + G+ ++K R
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERD 181
Query: 411 IHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
++ ++++ +R G ++A MP D I W+ ++S G E
Sbjct: 182 LYVGVG-LLELYTRCGDNDDAWRAFGDMP-KNDVIPWSFMISRFAQSGQSE 230
Score = 39.3 bits (90), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+ D VSWN +I G++ HG +A+K++NLM K+ +TF +L S+ +D
Sbjct: 410 LDLRDKVSWNAIICGYSMHGLGVEAIKMFNLM-KETKCKPDELTFVGVLSACSNTGRLDE 468
Query: 61 GRQIHGHILK-FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITGL 118
G+Q + + +G + + +V + + G + A + +++P E +++++ ++
Sbjct: 469 GKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGAC 528
Query: 119 LRRGLVEESR 128
+ VE R
Sbjct: 529 VIHNDVELGR 538
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 254/643 (39%), Positives = 374/643 (58%), Gaps = 31/643 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSWN +ISG A G +V ++ +L+ GL S + SS L QI
Sbjct: 971 DLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQI 1030
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +K G FV + L+D+Y+K G +
Sbjct: 1031 HACAMKAGVVLDSFVSTTLIDVYSK-------------------------------SGKM 1059
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
EE+ LF D SW M+ G + +G +A+ L+ M+ G +Q T + A
Sbjct: 1060 EEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAA 1119
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
GGL+ L++GKQI A +++ ++FV S ++DMY KC ++ A +F + + V+WT
Sbjct: 1120 GGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWT 1179
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
M+ G +NG E A+ + +M+ + ++PD++T +++ +C+ L +LE+G Q H ++
Sbjct: 1180 TMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKL 1239
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
V +LV Y KCGNIED+ LF N SW A++ G A+ G A E + F
Sbjct: 1240 NCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFF 1299
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
E+M S G+ PD VT IGVLSACS +GLV + F M K YGI P +HY+C++D LSR
Sbjct: 1300 EEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSR 1359
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AGR+ EA+ I+ MPF A + TLL++CR+ + E GK AE LL L+P + A+YVLL
Sbjct: 1360 AGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLL 1419
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S++YA+ +W++V+ R MR+ V+KDPG SW+ K++VH+F A D S +D IY ++
Sbjct: 1420 SNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKV 1479
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
E + +++ +EGY+PD L DVE +K L +HSEKLAIA+GL+ PP +RV+KNL
Sbjct: 1480 EYIMKRIREEGYLPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNL 1539
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RVC DCHNA KYISK+ +RE+++RDA RFH F++G CSCGD+W
Sbjct: 1540 RVCGDCHNAIKYISKVFEREVVLRDANRFHHFRSGVCSCGDYW 1582
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 141/505 (27%), Positives = 236/505 (46%), Gaps = 53/505 (10%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+WN ++S HA D ++ L L+ + +R T + + M +
Sbjct: 693 DLVTWNAILSAHAD--KARDGFHLFRL-LRRSFVSATRHTLAPVFKMCLLSASPSAAESL 749
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG+ +K G VFV LV++YAK G I +A+ FD + +++V++N M+ + GL
Sbjct: 750 HGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLE 809
Query: 125 EESRRLF-------------------RGMKDK---------------------------- 137
E+ LF R +K K
Sbjct: 810 YEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQLKQLKAYGTKLFMYDDDDDGS 869
Query: 138 DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIH 197
D I+W ++ +Q G EA+D F +M +A D TF +L+ GL LE GKQIH
Sbjct: 870 DVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIH 929
Query: 198 AFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSE 257
++R+ V VG+ L++MY K S+ A +VF M ++VSW M+ G +G E
Sbjct: 930 GIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEE 989
Query: 258 EAVKIFCNMQRNGIEPDDFTLGSVISSCANL-ASLEEGTQFHGRSLVTGLISFITVSNAL 316
+V +F ++ R G+ PD FT+ SV+ +C++L TQ H ++ G++ VS L
Sbjct: 990 CSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTL 1049
Query: 317 VTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDE 376
+ Y K G +E++ LF + D SW A++ GY G + + L+ M G + ++
Sbjct: 1050 IDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQ 1109
Query: 377 VTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFIN 436
+TL A +++G+ ++VK G + ++D+ + G +E A+ N
Sbjct: 1110 ITLANAAKAAGGLVGLKQGKQIQAVVVKR-GFNLDLFVISGVLDMYLKCGEMESARRIFN 1168
Query: 437 KMPFPPDAIGWATLLSSCRIHGNVE 461
++P PD + W T++S C +G E
Sbjct: 1169 EIP-SPDDVAWTTMISGCVENGQEE 1192
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 167/399 (41%), Gaps = 56/399 (14%)
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
LG++ H IL G F+ + L+ MY+K G + A++ FD P+ +
Sbjct: 644 LGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTS------------ 691
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+D ++W +++ R+ LFR +R ++ + T
Sbjct: 692 -----------------RDLVTWNAILSAHADKA--RDGFHLFRLLRRSFVSATRHTLAP 732
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
V C + + +H + ++ + +VFV ALV++Y K I+ A +F M ++
Sbjct: 733 VFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRD 792
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VV W M+ Y G EA+ +F R G+ PDD TL ++ + ++ E
Sbjct: 793 VVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQLKQL 852
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
++ T L + + D ++W +S + + G+ E
Sbjct: 853 KAYGTKLFMYDDDDDG-----------------------SDVIAWNKTLSWFLQRGETWE 889
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+D F M++ + D +T + +LS + +E G+ I+V+ G+ + C+I
Sbjct: 890 AVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRS-GLDQVVSVGNCLI 948
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
++ + G + A++ +M D + W T++S C + G
Sbjct: 949 NMYVKTGSVSRARTVFWQMN-EVDLVSWNTMISGCALSG 986
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 111/225 (49%), Gaps = 13/225 (5%)
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM--AWKNVVSWTAML 247
L GK+ HA I+ + H + F+ + L+ MY KC S+ A +F T +++V+W A+L
Sbjct: 642 LPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAIL 701
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
+ + + +F ++R+ + TL V C AS HG ++ GL
Sbjct: 702 SAHADK--ARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQ 759
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
+ V+ ALV Y K G I ++ LF+ M +RD V W ++ Y G E + LF +
Sbjct: 760 WDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEF 819
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE---YGIR 409
GL+PD+VTL C+ A +V+ ++ E +K+ YG +
Sbjct: 820 NRTGLRPDDVTL------CTLARVVKSKQNVLEWQLKQLKAYGTK 858
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRI-----TFSTMLIMSSSR 55
+P D V+W +ISG +G A+ Y+ M LS++ TF+T++ S
Sbjct: 1170 IPSPDDVAWTTMISGCVENGQEEHALFTYHHM------RLSKVQPDEYTFATLVKACSLL 1223
Query: 56 RCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
++ GRQIH + +K FV + LVDMYAK G I DA+ F I +N MI
Sbjct: 1224 TALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMI 1283
Query: 116 TGLLRRGLVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMR 166
GL + G EE+ + F MK + D +++ +++ +GL EA + F M+
Sbjct: 1284 VGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQ 1338
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 81/178 (45%), Gaps = 10/178 (5%)
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM--N 337
S++ + L G + H R L +G ++N L+T Y KCG++ + +LF+
Sbjct: 631 SILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDT 690
Query: 338 VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSAC--SRAGLVEKG 395
RD V+W A++S +A KA + LF + + TL V C S + +
Sbjct: 691 SRDLVTWNAILSAHAD--KARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAES 748
Query: 396 RHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
H + + + G++ +++I ++ GR+ EA+ + M D + W ++ +
Sbjct: 749 LHGYAVKI---GLQWDVFVAGALVNIYAKFGRIREARVLFDGMGL-RDVVLWNVMMKA 802
>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
Length = 600
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 231/604 (38%), Positives = 371/604 (61%), Gaps = 29/604 (4%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
T+ +L + + + G+++H ++K G+ S + + L++MY K G I +A+ FD++
Sbjct: 26 TYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQI 85
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
EKN D ISW +I QNGL +EA+ LF+
Sbjct: 86 QEKN-----------------------------ADVISWNGIIGAYTQNGLGKEALHLFK 116
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
M LEG+ +Q T + + AC L + EEG+ +HA + + + VG++LV+M+ KCK
Sbjct: 117 TMDLEGVIANQVTLINAIDACASLPSEEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCK 176
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
++ A +VF ++ KN+V+W M+ Y QN ++A+++F M G++PD T ++I
Sbjct: 177 NVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIID 236
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+CA LA+ EG H +G+ + + A++ FYGKCG ++++ +F+ + ++ V+
Sbjct: 237 ACAALAAHTEGRMVHDDITASGIPMDVALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVT 296
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
W+A+++ YA+ G E I+L+ +M+ GL+ + +T +G+L ACS AG G YF M+
Sbjct: 297 WSAILAAYAQNGYETEAIELYHEMVQGGLEVNGITFLGLLFACSHAGRSMDGVDYFVSMI 356
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
+++G+ P+ +HY +ID+L R+G+L+ ++ IN MP+ PD+ W LL +CR+HG+V+ G
Sbjct: 357 RDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLINSMPYEPDSSAWLALLGACRMHGDVDRG 416
Query: 464 KWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSR 523
AE + ELDP + Y+LLS++Y+S G+ D + R+ MR +G+ K PG S I+ K R
Sbjct: 417 ARIAELIYELDPEDSGPYILLSNLYSSTGRMDEARRTRKAMRLRGITKQPGLSSIEVKDR 476
Query: 524 VHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKL 583
VH F A P +I+AE+E+L ++ + GYV D+ +VL DVE EK ++L +HSE+L
Sbjct: 477 VHEFMAAQKLHPQLGRIHAEIERLKARVKEAGYVADVRAVLRDVEEEEKEQLLWYHSERL 536
Query: 584 AIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSC 643
AIAFGL+ PPG + +VKNLRVC DCH A K ISK+ R+I+VRDA+RFH F+NG CSC
Sbjct: 537 AIAFGLISTPPGTALHIVKNLRVCFDCHAAVKAISKVVGRKIVVRDAIRFHHFENGACSC 596
Query: 644 GDFW 647
GD+W
Sbjct: 597 GDYW 600
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 187/430 (43%), Gaps = 71/430 (16%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +SWN +I + +G +A+ ++ M +G+ +++T + +S + GR +
Sbjct: 91 DVISWNGIIGAYTQNGLGKEALHLFKTMDLEGV-IANQVTLINAIDACASLPSEEEGRIV 149
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H + S VG+ LV+M+ K + A+ FD LP KN+V
Sbjct: 150 HAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLV--------------- 194
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+W M+ QN ++AI +FR M LEG+ D TF +++ AC
Sbjct: 195 ----------------TWNNMVAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDAC 238
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L A EG+ +H I + +V +G+A++ Y KC + A ++F ++ KN V+W+
Sbjct: 239 AALAAHTEGRMVHDDITASGIPMDVALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWS 298
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
A+L Y QNG EA++++ M + G+E + T ++ +C++ +G + +
Sbjct: 299 AILAAYAQNGYETEAIELYHEMVQGGLEVNGITFLGLLFACSHAGRSMDGVDYFVSMIRD 358
Query: 305 -GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
G++ L+ G+ G ++ S L N M
Sbjct: 359 FGVVPVFEHYLNLIDLLGRSGQLQLSEDLINSMP-------------------------- 392
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD-HYTCMIDIL 422
+PD + +L AC G V++G E++ Y + P Y + ++
Sbjct: 393 --------YEPDSSAWLALLGACRMHGDVDRGARIAELI---YELDPEDSGPYILLSNLY 441
Query: 423 SRAGRLEEAK 432
S GR++EA+
Sbjct: 442 SSTGRMDEAR 451
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 117/264 (44%), Gaps = 34/264 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + V+WN +++ ++ + A++V+ M +G+ +TF T++ ++
Sbjct: 188 LPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMDLEGV-QPDAVTFLTIIDACAALAAHTE 246
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +H I G V +G+ ++ Y K G + +A+ FD L +KN
Sbjct: 247 GRMVHDDITASGIPMDVALGTAVMHFYGKCGRLDNARAIFDSLGKKN------------- 293
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+++W+ ++ QNG E EAI+L+ EM GL ++ TF +
Sbjct: 294 ------------------TVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNGITFLGL 335
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGS-ALVDMYCKCKSIKYAESVFRTMAWK- 238
L AC +G +IR+ VF L+D+ + ++ +E + +M ++
Sbjct: 336 LFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLINSMPYEP 395
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKI 262
+ +W A+L +G + +I
Sbjct: 396 DSSAWLALLGACRMHGDVDRGARI 419
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 255/646 (39%), Positives = 389/646 (60%), Gaps = 33/646 (5%)
Query: 3 FHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGR 62
F D VSW +++ +A + D++ ++ M G + T S L + +G+
Sbjct: 167 FKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGY-RPNNFTISAALKSCNGLEAFKVGK 225
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
+HG LK + ++VG L+++Y K G I +A++ F+E
Sbjct: 226 SVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEE-------------------- 265
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM-DQFTFGSVL 181
M D I W+ MI+ Q+ +EA++LF MR + + + FTF SVL
Sbjct: 266 -----------MPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVL 314
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
AC L+ L G QIH+ +++ NVFV +AL+D+Y KC I+ + +F KN V
Sbjct: 315 QACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEV 374
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
+W ++VGY Q G E+A+ +F NM I+P + T SV+ + A+L +LE G Q H +
Sbjct: 375 AWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLT 434
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ T V+N+L+ Y KCG I+D+ F++M+ +DEVSW AL+ GY+ G E +
Sbjct: 435 IKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEAL 494
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
+LF+ M KP+++T +GVLSACS AGL++KGR +F+ M+++YGI P +HYTCM+ +
Sbjct: 495 NLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWL 554
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
L R+G+ +EA I ++PF P + W LL +C IH N+++GK A+ +LE++P + A++
Sbjct: 555 LGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATH 614
Query: 482 VLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIY 541
VLLS++YA+ +WD+V+ +R+ M++K V+K+PG SW++ + VH F+ D S P I+
Sbjct: 615 VLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIF 674
Query: 542 AELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVV 601
A LE L +K GYVPD S VL DVE EK ++L HSE+LA+AFGL+ IP G IR++
Sbjct: 675 AMLEWLYKKTRDAGYVPDCSVVLLDVEDDEKERLLWMHSERLALAFGLIQIPSGCSIRII 734
Query: 602 KNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLR+C DCH K +SKI QREI++RD RFH F+ G CSCGD+W
Sbjct: 735 KNLRICVDCHAVIKLVSKIVQREIVIRDINRFHHFRQGVCSCGDYW 780
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 134/460 (29%), Positives = 233/460 (50%), Gaps = 37/460 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VS+ L G + A ++ + ++G +++ F+T+L + S D
Sbjct: 64 MPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGY-EVNQFVFTTLLKLLVSMDLADT 122
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+H ++ K G + FVG+ L+D Y+ G + A++ FD
Sbjct: 123 CLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFD------------------- 163
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G+ KD +SWT M+ +N +++ LF +MR+ G + FT +
Sbjct: 164 ------------GIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAA 211
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L +C GL A + GK +H ++ + +++VG AL+++Y K I A+ F M ++
Sbjct: 212 LKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDL 271
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQFHG 299
+ W+ M+ Y Q+ S+EA+++FC M+++ + P++FT SV+ +CA+L L G Q H
Sbjct: 272 IPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHS 331
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
L GL S + VSNAL+ Y KCG IE+S +LF ++EV+W ++ GY + G +
Sbjct: 332 CVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEK 391
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE-YGIRPIHDHYTCM 418
++LF ML ++P EVT VL A + +E GR + +K Y + + +
Sbjct: 392 ALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVAN--SL 449
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
ID+ ++ GR+++A+ +KM D + W L+ IHG
Sbjct: 450 IDMYAKCGRIDDARLTFDKMD-KQDEVSWNALICGYSIHG 488
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 202/421 (47%), Gaps = 39/421 (9%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
+++ ML + R + G+ +H HILK G +D++A+
Sbjct: 5 SYANMLQQAIRNRDPNAGKSLHCHILKHGAS---------LDLFAQ-------------- 41
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
N ++ + G +E++ +LF M +++S+ T+ G ++ + A L
Sbjct: 42 --------NILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLL 93
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
+ EG ++QF F ++L + + +HA++ + H+ + FVG+AL+D Y C
Sbjct: 94 RLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCG 153
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
++ A VF + +K++VSWT M+ Y +N C E+++ +FC M+ G P++FT+ + +
Sbjct: 154 NVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALK 213
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
SC L + + G HG +L + V AL+ Y K G I ++ + F EM D +
Sbjct: 214 SCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIP 273
Query: 344 WTALVSGYAKFGKANETIDLFEKM-LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
W+ ++S YA+ K+ E ++LF +M S + P+ T VL AC+ L+ G +
Sbjct: 274 WSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCV 333
Query: 403 VKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
+K G+ ++D+ ++ G +E + + + W T+ I G V++
Sbjct: 334 LK-VGLDSNVFVSNALMDVYAKCGEIENSVKLFTGST-EKNEVAWNTI-----IVGYVQL 386
Query: 463 G 463
G
Sbjct: 387 G 387
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 182/353 (51%), Gaps = 35/353 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D + W+L+IS +A +A++++ M + + + TF+++L +S ++L
Sbjct: 266 MPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNL 325
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G QIH +LK G S VFV + L+D+YAK G I ++ + F EKN V +NT+I G ++
Sbjct: 326 GNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQ 385
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G E++ LF M GL+ + ++ T+ SV
Sbjct: 386 LGDGEKALNLFSNML-----------------GLDIQPTEV--------------TYSSV 414
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A L+ALE G+QIH+ I+ + + V ++L+DMY KC I A F M ++
Sbjct: 415 LRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDE 474
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW A++ GY +G EA+ +F MQ++ +P+ T V+S+C+N L++G + H +
Sbjct: 475 VSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKG-RAHFK 533
Query: 301 SLVT--GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV-SWTALVSG 350
S++ G+ I +V G+ G +++ +L E+ + V W AL+
Sbjct: 534 SMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGA 586
>gi|297824049|ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325746|gb|EFH56166.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 565
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 232/565 (41%), Positives = 359/565 (63%), Gaps = 1/565 (0%)
Query: 84 VDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWT 143
+ MY+KLG + A ++ + +KN + N +I G +R G + +R++F M D+ +W
Sbjct: 1 MSMYSKLGDLPSAVALYERMRKKNFMSSNILINGYVRAGDLVSARKVFDEMPDRKLTTWN 60
Query: 144 TMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRN 203
MI GL+Q E + LFREM G + D++T GSV + GL ++ G+QIH + I+
Sbjct: 61 AMIAGLIQFEYNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKY 120
Query: 204 DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIF 263
+ ++ V S+L MY + ++ E V R+M +N+V+W +++G QNGC E + ++
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 264 CNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKC 323
M+ +G P+ T +V+SSC++LA +G Q H ++ G S + V ++L++ Y KC
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC 240
Query: 324 GNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG-LKPDEVTLIGV 382
G + D+ + F+E DEV W++++S Y G+ +E I LF M ++ +EV + +
Sbjct: 241 GCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNL 300
Query: 383 LSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPP 442
L ACS +GL +KG F++MV++YG +P HYTC++D+L RAG L++A++ I MP P
Sbjct: 301 LYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKP 360
Query: 443 DAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRR 502
D + W TLLS+C IH N E+ + + +LE+DP + A YVLL++++AS +W VS++R+
Sbjct: 361 DPVIWKTLLSACNIHKNAEMAQKVFKEILEIDPNDSACYVLLANVHASAKRWRDVSEVRK 420
Query: 503 TMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSS 562
+MR+K V+K+ G SW ++K VH F D S S +IY+ L++L +M +GY PD +S
Sbjct: 421 SMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTAS 480
Query: 563 VLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQ 622
VLHD++ EK L HSEKLA+AF L+ +P G PIR++KNLRVCSDCH A KYIS I
Sbjct: 481 VLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIMN 540
Query: 623 REILVRDAVRFHLFKNGECSCGDFW 647
REI +RD RFH F NG+CSCGD+W
Sbjct: 541 REITLRDGSRFHHFINGKCSCGDYW 565
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 170/372 (45%), Gaps = 37/372 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLG-NLSRITFSTMLIMSSSRRCVD 59
MP +WN +I+G + + ++ M GLG + T ++ S+ R V
Sbjct: 51 MPDRKLTTWNAMIAGLIQFEYNEEGLSLFREM--HGLGFSPDEYTLGSVFSGSAGLRSVS 108
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+G+QIHG+ +K+G + V S L MY + G + D + +P +N+V +NT+I
Sbjct: 109 IGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLI---- 164
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
G QNG + L++ M++ G ++ TF +
Sbjct: 165 ---------------------------MGNAQNGCPETVLYLYKMMKISGCRPNKITFVT 197
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL++C L +G+QIHA I+ V V S+L+ MY KC + A F ++
Sbjct: 198 VLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDED 257
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
V W++M+ YG +G +EA+K+F +M ++ +E ++ +++ +C++ ++G +
Sbjct: 258 EVMWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELF 317
Query: 299 GRSLVT-GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGK 356
+ G + +V G+ G ++ + + M ++ D V W L+S
Sbjct: 318 DMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKN 377
Query: 357 ANETIDLFEKML 368
A +F+++L
Sbjct: 378 AEMAQKVFKEIL 389
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 131/281 (46%), Gaps = 43/281 (15%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+WN LI G+A +G + +Y +M G ++ITF T+L S
Sbjct: 152 MPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGC-RPNKITFVTVLSSCSDLAIRGQ 210
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIH +K G S V V S L+ MY+K G + DA + F E +++ VM+++MI+
Sbjct: 211 GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGF 270
Query: 121 RGLVEESRRLFRGMKDK-----DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
G +E+ +LF M ++ + +++ ++ +GL+ + ++LF M ++++
Sbjct: 271 HGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDMM------VEKY 324
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
F K + + +VD+ + + AE++ ++M
Sbjct: 325 GF----------------------------KPGLKHYTCVVDLLGRAGCLDQAEAIIKSM 356
Query: 236 AWK-NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDD 275
K + V W +L + +E A K+F + I+P+D
Sbjct: 357 PIKPDPVIWKTLLSACNIHKNAEMAQKVFKEILE--IDPND 395
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 263/649 (40%), Positives = 373/649 (57%), Gaps = 69/649 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTML-IMSSSRRCVD 59
+P D +WN +IS + +G ++A+ + +L L + R F T ++ + VD
Sbjct: 77 IPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLL---LVSEIRPDFYTFPPVLKACGTLVD 133
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
GR+IH K GF VFV + L+ MY++ G TG+
Sbjct: 134 -GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGF-----------------------TGI- 168
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+R LF M +D SW MI+GL+QNG +A+D+ EMRLEG+ M+ T S
Sbjct: 169 -------ARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVS 221
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L VDMY K + A VF + K+
Sbjct: 222 IL-------------------------------PVFVDMYAKLGLLDSAHKVFEIIPVKD 250
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQR-NGIEPDDFTLGSVISSCANLASLEEGTQFH 298
V+SW ++ GY QNG + EA++++ M+ I P+ T S++ + A++ +L++G + H
Sbjct: 251 VISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIH 310
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
GR + T L + V+ L+ YGKCG + D+ LF ++ V+W A++S + G A
Sbjct: 311 GRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAE 370
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
+T+ LF +ML G+KPD VT + +LSACS +G VE+G+ F +M +EYGI+P HY CM
Sbjct: 371 KTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCM 429
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
+D+L RAG LE A FI MP PDA W LL +CRIHGN+E+GK+A++ L E+D N
Sbjct: 430 VDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNV 489
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
YVLLS+IYA+ GKW+ V ++R RE+G++K PG S I+ +V +F + S P
Sbjct: 490 GYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCK 549
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
+IY EL L KM GY+PD S VL DVE EK +L HSE+LAIAFG++ PP PI
Sbjct: 550 EIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPI 609
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R+ KNLRVC DCHNATK+IS+ITQREI+VRD+ RFH FK+G CSCGD+W
Sbjct: 610 RIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 658
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 128/494 (25%), Positives = 230/494 (46%), Gaps = 91/494 (18%)
Query: 36 GLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYD 95
GLGN + L SS++ + +H ++ G +F+ + LV++YA LG +
Sbjct: 12 GLGNQNEEIDFNFLFDSSTK--TPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSL 69
Query: 96 AKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLE 155
++ FD++P+K D +W +MI+ + NG
Sbjct: 70 SRCTFDQIPQK-------------------------------DVYAWNSMISAYVHNGHF 98
Query: 156 REAIDLFREMRL-EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSA 214
EAI F ++ L + D +TF VL ACG L+ +G++IH + + + NVFV ++
Sbjct: 99 HEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLV---DGRKIHCWAFKLGFQWNVFVAAS 155
Query: 215 LVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD 274
L+ MY + A S+F M ++++ SW AM+ G QNG + +A+ + M+ GI+
Sbjct: 156 LIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIK-- 213
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN 334
++ +++ V Y K G ++ +H++F
Sbjct: 214 -----------------------------MNFVTVVSILPVFVDMYAKLGLLDSAHKVFE 244
Query: 335 EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS-HGLKPDEVTLIGVLSACSRAGLVE 393
+ V+D +SW L++GYA+ G A+E I++++ M + P++ T + +L A + G ++
Sbjct: 245 IIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQ 304
Query: 394 KGRHYFEIMVKEYGIRPIH-DHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATL 450
+G ++K +H D + TC+ID+ + GRL +A S ++P ++ W +
Sbjct: 305 QGMKIHGRVIKT----NLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVP-QESSVTWNAI 359
Query: 451 LSSCRIHGNVE-IGKWAAESLLE-LDPYNPASYVLLSSI----YASKGKWDHVSQLRRTM 504
+S IHG+ E K E L E + P + LLS+ + +GKW R M
Sbjct: 360 ISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKW-----CFRLM 414
Query: 505 REKGVR---KDPGC 515
+E G++ K GC
Sbjct: 415 QEYGIKPSLKHYGC 428
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 260/649 (40%), Positives = 386/649 (59%), Gaps = 35/649 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D V+WN +I+G + +G +DAV++ M ++G+ S T +L + +
Sbjct: 170 MSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSS-TIVGVLPTVGEAKALGH 228
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +HG+ ++ F + V VG+ L+DMYAK + A++ FD + +N
Sbjct: 229 GKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRN------------- 275
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ--FTFG 178
+SW+ MI G + + +EA++LF +M L+ AMD T G
Sbjct: 276 ------------------EVSWSAMIGGYVASDCMKEALELFDQMILKD-AMDPTPVTLG 316
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
SVL AC L L G+++H +II+ ++ +G+ L+ MY KC I A F M K
Sbjct: 317 SVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPK 376
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+ VS++A++ G QNG + A+ IF MQ +GI+PD T+ V+ +C++LA+L+ G H
Sbjct: 377 DSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSH 436
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G +V G + + NAL+ Y KCG I + +FN M+ D VSW A++ GY G
Sbjct: 437 GYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGM 496
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
E + LF +L+ GLKPD++T I +LS+CS +GLV +GR +F+ M +++ I P +H CM
Sbjct: 497 EALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICM 556
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
+DIL RAG ++EA FI MPF PD W+ LLS+CRIH N+E+G+ ++ + L P +
Sbjct: 557 VDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPEST 616
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
++VLLS+IY++ G+WD + +R T ++ G++K PGCSWI+ VH F D S
Sbjct: 617 GNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLS 676
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
QI +LE+L +M + GY + S V DVE EK ++L +HSEKLAIAFG+L + G PI
Sbjct: 677 QINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPI 736
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V KNLRVC DCH A K+++ IT+REI VRDA RFH FKNG C+CGDFW
Sbjct: 737 LVTKNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 785
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 149/463 (32%), Positives = 239/463 (51%), Gaps = 43/463 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + WN +I +A +G + A+ +Y+ ML G+ ++ T+ +L S ++
Sbjct: 69 IPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGV-RPNKYTYPFVLKACSGLLAIED 127
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +IH H FG S VFV + LVD YAK G++
Sbjct: 128 GVEIHSHAKMFGLESDVFVCTALVDFYAKCGILV-------------------------- 161
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
E++RLF M +D ++W MI G GL +A+ L +M+ EG+ + T V
Sbjct: 162 -----EAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGV 216
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L G AL GK +H + +R + V VG+ L+DMY KC+ + YA +F M +N
Sbjct: 217 LPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNE 276
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VSW+AM+ GY + C +EA+++F M ++ ++P TLGSV+ +CA L L G + H
Sbjct: 277 VSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHC 336
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ G + I + N L++ Y KCG I+D+ R F+EMN +D VS++A+VSG + G A
Sbjct: 337 YIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAV 396
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG--RHYFEIMVKEYGIRPIHDHYTC 417
+ +F M G+ PD T++GVL ACS ++ G H + ++V+ + D C
Sbjct: 397 ALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGY-LIVRGFAT----DTLIC 451
Query: 418 --MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ID+ S+ G++ A+ N+M D + W ++ IHG
Sbjct: 452 NALIDMYSKCGKISFAREVFNRMD-RHDIVSWNAMIIGYGIHG 493
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 211/430 (49%), Gaps = 35/430 (8%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
++IH H LK + V L +Y + A+R FDE+P ++++
Sbjct: 27 AKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVIL---------- 76
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
W +I NG AIDL+ M G+ +++T+ V
Sbjct: 77 ---------------------WNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFV 115
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC GLLA+E+G +IH+ + +VFV +ALVD Y KC + A+ +F +M+ ++V
Sbjct: 116 LKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDV 175
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+W AM+ G G ++AV++ MQ GI P+ T+ V+ + +L G HG
Sbjct: 176 VAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGY 235
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ + + V L+ Y KC + + ++F+ M VR+EVSW+A++ GY E
Sbjct: 236 CVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEA 295
Query: 361 IDLFEKM-LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
++LF++M L + P VTL VL AC++ + +GR ++K + I T ++
Sbjct: 296 LELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNT-LL 354
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
+ ++ G +++A F ++M P D++ ++ ++S C +GN + + +++L +P
Sbjct: 355 SMYAKCGVIDDAIRFFDEMN-PKDSVSFSAIVSGCVQNGNAAVA-LSIFRMMQLSGIDPD 412
Query: 480 SYVLLSSIYA 489
+L + A
Sbjct: 413 LTTMLGVLPA 422
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 117/217 (53%)
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L AC +L E K+IH ++N + V L +Y C + A +F + +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
V+ W ++ Y NG + A+ ++ +M G+ P+ +T V+ +C+ L ++E+G + H
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ + GL S + V ALV FY KCG + ++ RLF+ M+ RD V+W A+++G + +G ++
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR 396
+ L +M G+ P+ T++GVL A + G+
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGK 230
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 260/649 (40%), Positives = 386/649 (59%), Gaps = 35/649 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D V+WN +I+G + +G +DAV++ M ++G+ S T +L + +
Sbjct: 170 MSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSS-TIVGVLPTVGEAKALGH 228
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +HG+ ++ F + V VG+ L+DMYAK + A++ FD + +N
Sbjct: 229 GKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRN------------- 275
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ--FTFG 178
+SW+ MI G + + +EA++LF +M L+ AMD T G
Sbjct: 276 ------------------EVSWSAMIGGYVXSDCMKEALELFDQMILKD-AMDPTPVTLG 316
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
SVL AC L L G+++H +II+ ++ +G+ L+ MY KC I A F M K
Sbjct: 317 SVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPK 376
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+ VS++A++ G QNG + A+ IF MQ +GI+PD T+ V+ +C++LA+L+ G H
Sbjct: 377 DSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSH 436
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G +V G + + NAL+ Y KCG I + +FN M+ D VSW A++ GY G
Sbjct: 437 GYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGM 496
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
E + LF +L+ GLKPD++T I +LS+CS +GLV +GR +F+ M +++ I P +H CM
Sbjct: 497 EALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICM 556
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
+DIL RAG ++EA FI MPF PD W+ LLS+CRIH N+E+G+ ++ + L P +
Sbjct: 557 VDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPEST 616
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
++VLLS+IY++ G+WD + +R T ++ G++K PGCSWI+ VH F D S
Sbjct: 617 GNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLS 676
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
QI +LE+L +M + GY + S V DVE EK ++L +HSEKLAIAFG+L + G PI
Sbjct: 677 QINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPI 736
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V KNLRVC DCH A K+++ IT+REI VRDA RFH FKNG C+CGDFW
Sbjct: 737 LVTKNLRVCGDCHAAIKFMTVITKREITVRDANRFHHFKNGTCNCGDFW 785
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 148/463 (31%), Positives = 238/463 (51%), Gaps = 43/463 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + WN +I +A +G + A+ +Y+ ML G+ ++ T+ +L S ++
Sbjct: 69 IPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGV-RPNKYTYPFVLKACSGLLAIED 127
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +IH H FG S VFV + LVD YAK G++
Sbjct: 128 GVEIHSHAKMFGLESDVFVCTALVDFYAKCGILV-------------------------- 161
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
E++RLF M +D ++W MI G GL +A+ L +M+ EG+ + T V
Sbjct: 162 -----EAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGV 216
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L G AL GK +H + +R + V VG+ L+DMY KC+ + YA +F M +N
Sbjct: 217 LPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNE 276
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VSW+AM+ GY + C +EA+++F M ++ ++P TLGSV+ +CA L L G + H
Sbjct: 277 VSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHC 336
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ G + I + N L++ Y KCG I+D+ R F+ MN +D VS++A+VSG + G A
Sbjct: 337 YIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAV 396
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG--RHYFEIMVKEYGIRPIHDHYTC 417
+ +F M G+ PD T++GVL ACS ++ G H + ++V+ + D C
Sbjct: 397 ALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGY-LIVRGFAT----DTLIC 451
Query: 418 --MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ID+ S+ G++ A+ N+M D + W ++ IHG
Sbjct: 452 NALIDMYSKCGKISFAREVFNRMD-RHDIVSWNAMIIGYGIHG 493
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 210/430 (48%), Gaps = 35/430 (8%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
++IH H LK + V L +Y + A+R FDE+P ++++
Sbjct: 27 AKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVIL---------- 76
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
W +I NG AIDL+ M G+ +++T+ V
Sbjct: 77 ---------------------WNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFV 115
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC GLLA+E+G +IH+ + +VFV +ALVD Y KC + A+ +F +M+ ++V
Sbjct: 116 LKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDV 175
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+W AM+ G G ++AV++ MQ GI P+ T+ V+ + +L G HG
Sbjct: 176 VAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGY 235
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ + + V L+ Y KC + + ++F+ M VR+EVSW+A++ GY E
Sbjct: 236 CVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEA 295
Query: 361 IDLFEKM-LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
++LF++M L + P VTL VL AC++ + +GR ++K + I T ++
Sbjct: 296 LELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNT-LL 354
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
+ ++ G +++A F + M P D++ ++ ++S C +GN + + +++L +P
Sbjct: 355 SMYAKCGVIDDAIRFFDXMN-PKDSVSFSAIVSGCVQNGNAAVA-LSIFRMMQLSGIDPD 412
Query: 480 SYVLLSSIYA 489
+L + A
Sbjct: 413 LTTMLGVLPA 422
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 117/217 (53%)
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L AC +L E K+IH ++N + V L +Y C + A +F + +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
V+ W ++ Y NG + A+ ++ +M G+ P+ +T V+ +C+ L ++E+G + H
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ + GL S + V ALV FY KCG + ++ RLF+ M+ RD V+W A+++G + +G ++
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR 396
+ L +M G+ P+ T++GVL A + G+
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGK 230
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 246/642 (38%), Positives = 399/642 (62%), Gaps = 15/642 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + + WN++ GHA A+K+Y +M+ GL + TF +L + +
Sbjct: 35 IPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLP-NFFTFPFLLKSCAKSKTFKE 93
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIHGH+LK GF ++V + L+ MYA+ G + DA++ FD +++V Y +ITG
Sbjct: 94 GQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITGYAS 153
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
RG +E ++++F + KD +SW MI+G + G ++A++LF+EM + D+ T +V
Sbjct: 154 RGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATV 213
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHK--DNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
++AC ++E G+Q+H++I NDH N+ + +AL+D+Y KC ++ A + ++ K
Sbjct: 214 VSACAQSGSIELGRQVHSWI--NDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNK 271
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+V+SW ++ GY +EA+ +F M R+G P+D T+ S++ +CA+L +++ G H
Sbjct: 272 DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH 331
Query: 299 GRSLVTGLISFITVSNA------LVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGY 351
+ + + V+NA L+ Y KCG+I+ + ++ + +S W A++ G+
Sbjct: 332 --VYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGF 389
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
A G+AN D+F +M +G++PD++T +G+LSACS +G+++ GR+ F M ++Y I P
Sbjct: 390 AMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPK 449
Query: 412 HDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL 471
+HY CMID+L +G +EA+ IN MP PD + W +LL +C+IHGN+E+G+ A+ L+
Sbjct: 450 LEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLI 509
Query: 472 ELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKD-PGCSWIKYKSRVHIFSAD 530
+++P NP SYVLLS+IYA+ GKW+ V ++R + +KG++K PGCS I+ S VH F
Sbjct: 510 KIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVVHEFIIG 569
Query: 531 DWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLL 590
D P + +IY LE++ + + G+VPD S VL ++E K L HHSEKLAIAFGL+
Sbjct: 570 DKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI 629
Query: 591 FIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVR 632
PG + +VKNLRVC +CH ATK ISKI +REI+ RD R
Sbjct: 630 STKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTR 671
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 194/413 (46%), Gaps = 37/413 (8%)
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
+F + + + + W M G + A+ L+ M GL + FTF +L +C
Sbjct: 31 VFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKT 90
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA---- 245
+EG+QIH +++ +++V ++L+ MY + ++ A+ VF + ++VVS+TA
Sbjct: 91 FKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITG 150
Query: 246 ---------------------------MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
M+ GY + G ++A+++F M + ++PD+ T+
Sbjct: 151 YASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTM 210
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
+V+S+CA S+E G Q H G S + + NAL+ Y KCG +E + L ++
Sbjct: 211 ATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSN 270
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH- 397
+D +SW L+ GY E + LF++ML G P++VT++ +L AC+ G ++ GR
Sbjct: 271 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 330
Query: 398 --YFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCR 455
Y + +K + T +ID+ ++ G ++ A + F W ++
Sbjct: 331 HVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFA 390
Query: 456 IHG--NVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMRE 506
+HG N ++ ++P + ++V L S + G D + R+MR+
Sbjct: 391 MHGRANAAFDIFSRMRKNGIEP-DDITFVGLLSACSHSGMLDLGRNIFRSMRQ 442
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 125/258 (48%), Gaps = 33/258 (12%)
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ YA SVF T+ N + W M G+ + A+K++ M G+ P+ FT ++ S
Sbjct: 25 LPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKS 84
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
CA + +EG Q HG L G + V +L++ Y + G +ED+ ++F+ + RD VS+
Sbjct: 85 CAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSY 144
Query: 345 TAL-------------------------------VSGYAKFGKANETIDLFEKMLSHGLK 373
TAL +SGYA+ G + ++LF++M+ +K
Sbjct: 145 TALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVK 204
Query: 374 PDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKS 433
PDE T+ V+SAC+++G +E GR + ++G +ID+ S+ G +E A
Sbjct: 205 PDESTMATVVSACAQSGSIELGRQVHS-WINDHGFGSNLKIVNALIDLYSKCGEVETACE 263
Query: 434 FINKMPFPPDAIGWATLL 451
+ + D I W TL+
Sbjct: 264 LLEGLS-NKDVISWNTLI 280
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 226/545 (41%), Positives = 357/545 (65%), Gaps = 7/545 (1%)
Query: 107 NIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR 166
++VM NT++ + G + +R+LF M +D ++WT +ITG Q+ ++A+ L EM
Sbjct: 49 DLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEML 108
Query: 167 LEGLAMDQFTFGSVLTACGGLLALE--EGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
GL +QFT S+L A G+ + + +G+Q+H +R + NV+V A++DMY +C
Sbjct: 109 RIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHH 168
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
++ A+ +F M KN VSW A++ GY + G ++A +F NM R ++P FT SV+ +
Sbjct: 169 LEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCA 228
Query: 285 CANLASLEEGTQFHGRSLVTG--LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
CA++ SLE+G H + G L++F V N L+ Y K G+IED+ ++F+ + RD V
Sbjct: 229 CASMGSLEQGKWVHALMIKWGEKLVAF--VGNTLLDMYAKSGSIEDAKKVFDRLAKRDVV 286
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
SW ++++GY++ G + FE+ML + P+++T + VL+ACS AGL+++GRHYF++M
Sbjct: 287 SWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMM 346
Query: 403 VKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
K+Y + P HY M+D+L RAG L+ A FI++MP P A W LL +CR+H N+E+
Sbjct: 347 -KKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMHKNMEL 405
Query: 463 GKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKS 522
G +AAE + ELD + P ++VLL +IYA G+W+ +++R+ M+E GV+K+P CSW++ ++
Sbjct: 406 GGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKMMKESGVKKEPACSWVEMEN 465
Query: 523 RVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEK 582
VH+F ADD + P +I+ E+++ K+ + GYVPD S VL ++ E+ L +HSEK
Sbjct: 466 EVHVFVADDDAHPQRREIHNMWEQISDKIKEIGYVPDSSHVLLCMDQQEREAKLQYHSEK 525
Query: 583 LAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECS 642
LA+AF LL PPG IR+ KN+R+C DCH+A K++SK+ +REI+VRD RFH F +G CS
Sbjct: 526 LALAFALLNTPPGSTIRIKKNIRICGDCHSAFKFVSKLVEREIIVRDTNRFHHFCDGACS 585
Query: 643 CGDFW 647
C D+W
Sbjct: 586 CEDYW 590
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 175/297 (58%), Gaps = 7/297 (2%)
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
++L C L L EGK IHA ++ + +D++ + + L+++Y KC + YA +F M+ +
Sbjct: 20 TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE--EGTQ 296
+VV+WTA++ GY Q+ ++A+ + M R G++P+ FTL S++ + + + S + +G Q
Sbjct: 80 DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
HG L G S + VS A++ Y +C ++E++ +F+ M ++EVSW AL++GYA+ G+
Sbjct: 140 LHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQ 199
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
++ LF ML +KP T VL AC+ G +E+G+ +M+K +G + +
Sbjct: 200 GDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIK-WGEKLVAFVGN 258
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL 473
++D+ +++G +E+AK +++ D + W ++L+ HG +GK A + E+
Sbjct: 259 TLLDMYAKSGSIEDAKKVFDRLA-KRDVVSWNSMLTGYSQHG---LGKVALQRFEEM 311
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 183/353 (51%), Gaps = 35/353 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D V+W LI+G++ H DA+ + ML+ GL ++ T +++L +S D+
Sbjct: 76 MSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGL-KPNQFTLASLLKAASGVGSTDV 134
Query: 61 --GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
GRQ+HG L++G+ S V+V ++DMYA+ + +A+ FD + KN V +N +I G
Sbjct: 135 LQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGY 194
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
R+G +G K A LF M E + FT+
Sbjct: 195 ARKG---------QGDK----------------------AFCLFSNMLRENVKPTHFTYS 223
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
SVL AC + +LE+GK +HA +I+ K FVG+ L+DMY K SI+ A+ VF +A +
Sbjct: 224 SVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKR 283
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+VVSW +ML GY Q+G + A++ F M R I P+D T V+++C++ L+EG +
Sbjct: 284 DVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYF 343
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSG 350
+ I+ +V G+ G+++ + + +EM ++ + W AL+
Sbjct: 344 DMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGA 396
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/645 (37%), Positives = 385/645 (59%), Gaps = 38/645 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNL--SRITFSTMLIMSSSRRCVDLGRQI 64
V+WN LI+G++ +G A+K+Y M+ + ITFS+ L + + GR+I
Sbjct: 126 VTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREI 185
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
+ G+ S V + L++MY+K G +
Sbjct: 186 EARTVASGYASDSIVQNALINMYSKCGSL------------------------------- 214
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
E +R++F +K++D I+W TMI+G + G +A++LF+ M + TF +LTAC
Sbjct: 215 ESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTAC 274
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS-IKYAESVFRTMAWKNVVSW 243
L LE+G+ IH + + ++ ++ +G+ L++MY KC S ++ A VF M ++V++W
Sbjct: 275 TNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITW 334
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
++V Y Q G +++A+ IF MQ + P++ TL +V+S+CA L + +G H
Sbjct: 335 NILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIAS 394
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
+ + + N+L+ Y +CG+++D+ +F + + VSW+ L++ YA+ G + ++
Sbjct: 395 GRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEH 454
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F ++L GL D+VT++ LSACS G++++G F MV ++G+ P + H+ CM+D+LS
Sbjct: 455 FWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLS 514
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYV- 482
RAGRLE A++ I+ MPF PDA+ W +LLS C++H + + A+ L EL+ + S V
Sbjct: 515 RAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVT 574
Query: 483 LLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYA 542
LLS++YA G+WD V R+T + RK+PGCS+I+ VH F A D S P + I A
Sbjct: 575 LLSNVYAEAGRWDDV---RKTRNRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAA 631
Query: 543 ELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVK 602
E+++L+++M GYVPDM VLH+V+ EK +ML +HSEKLAIA+GL+ PPG P+ +VK
Sbjct: 632 EIKRLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVK 691
Query: 603 NLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
NLR C DCH A K+IS+I R+I+VRD+ RFH F+NG CSC D+W
Sbjct: 692 NLRACVDCHAAAKFISRIVGRKIVVRDSTRFHHFENGSCSCKDYW 736
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 121/464 (26%), Positives = 233/464 (50%), Gaps = 39/464 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
+ VSW L+++ A +G +A+ Y M+ +GL F + + SS + + G+ +
Sbjct: 22 NSVSWTLIVAAFARNGHYREALGYYRRMVLEGL-RPDGAMFVVAIGVCSSSKDLKQGQLL 80
Query: 65 HGHILKFGFGSY-VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
H IL+ + + +G+ L+ MYA+ + A++ FDE+ +K +V +N +I G R
Sbjct: 81 HAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSR--- 137
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM---RLEGLAMDQFTFGSV 180
NG R A+ ++++M EG+ D TF S
Sbjct: 138 ----------------------------NGDHRGALKIYQDMVSKSPEGMKPDAITFSSA 169
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC + + +G++I A + + + + V +AL++MY KC S++ A VF + ++V
Sbjct: 170 LYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDV 229
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
++W M+ GY + G + +A+++F M N +P+ T ++++C NL LE+G H +
Sbjct: 230 IAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRK 289
Query: 301 SLVTGLISFITVSNALVTFYGKC-GNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
G S + + N L+ Y KC ++E++ ++F M RD ++W L+ Y ++G+A +
Sbjct: 290 VREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKD 349
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+D+F++M + P+E+TL VLSAC+ G +G+ ++ + + M
Sbjct: 350 ALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLM- 408
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
++ +R G L++ + + W+TL+++ HG+ G
Sbjct: 409 NMYNRCGSLDDTVGVFAAIR-DKSLVSWSTLIAAYAQHGHSRTG 451
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 186/335 (55%), Gaps = 7/335 (2%)
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G V ++ +F ++ +S+SWT ++ +NG REA+ +R M LEGL D F +
Sbjct: 6 GSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAI 65
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
C L++G+ +HA I+ + ++ +G+AL+ MY +C+ ++ A F M K +
Sbjct: 66 GVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTL 125
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNM---QRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
V+W A++ GY +NG A+KI+ +M G++PD T S + +C + + +G +
Sbjct: 126 VTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREI 185
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
R++ +G S V NAL+ Y KCG++E + ++F+ + RD ++W ++SGYAK G A
Sbjct: 186 EARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAA 245
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
+ ++LF++M + KP+ VT IG+L+AC+ +E+GR V+E G
Sbjct: 246 TQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHR-KVREDGYESDLVIGNV 304
Query: 418 MIDILSR-AGRLEEAKSFINKMPFPPDAIGWATLL 451
++++ ++ + LEEA+ +M D I W L+
Sbjct: 305 LLNMYTKCSSSLEEARQVFERMR-TRDVITWNILI 338
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 145/307 (47%), Gaps = 21/307 (6%)
Query: 218 MYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFT 277
MY KC S+ A +VF + N VSWT ++ + +NG EA+ + M G+ PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 278 LGSVISSCANLASLEEGTQFHGRSLVTGLISF-ITVSNALVTFYGKCGNIEDSHRLFNEM 336
I C++ L++G H L T L+ F I + AL+T Y +C ++E + + F+EM
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 337 NVRDEVSWTALVSGYAKFGKANETIDLFEKMLS---HGLKPDEVTLIGVLSACSRAGLVE 393
+ V+W AL++GY++ G + +++ M+S G+KPD +T L AC+ G +
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180
Query: 394 KGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+GR E G +I++ S+ G LE A+ +++ D I W T++S
Sbjct: 181 QGRE-IEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLK-NRDVIAWNTMISG 238
Query: 454 CRIHGNVEIGKWAAESLLEL-------DPY-NPASYVLLSSIYASKGKWDHVSQLRRTMR 505
G AA LEL DP N +++ L + + + + R +R
Sbjct: 239 YAKQG-------AATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVR 291
Query: 506 EKGVRKD 512
E G D
Sbjct: 292 EDGYESD 298
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 116/265 (43%), Gaps = 36/265 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D ++WN+LI + +G DA+ ++ M + + + IT S +L +
Sbjct: 326 MRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAP-NEITLSNVLSACAVLGAKRQ 384
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +H I + V + + L++MY + G + D F + +K++V
Sbjct: 385 GKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLV----------- 433
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SW+T+I Q+G R ++ F E+ EGLA D T S
Sbjct: 434 --------------------SWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVST 473
Query: 181 LTACGGLLALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYAESVFRTMAW- 237
L+AC L+EG Q ++ DH + +VD+ + ++ AE++ M +
Sbjct: 474 LSACSHGGMLKEGVQTFLSMV-GDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFL 532
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKI 262
+ V+WT++L G + ++ A ++
Sbjct: 533 PDAVAWTSLLSGCKLHNDTKRAARV 557
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 253/644 (39%), Positives = 361/644 (56%), Gaps = 33/644 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+W+ +I+ G +A+ ++ M + +R+T ++L + + LG+ I
Sbjct: 394 DLVAWSAIIAALVQTGYPEEALSLFQEMQNQKM-KPNRVTLMSILPACADLSLLKLGKSI 452
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +K S + G+ LV MYAK G A F+
Sbjct: 453 HCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNR---------------------- 490
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
M +D ++W ++I G Q G AID+F ++RL + D T V+ AC
Sbjct: 491 ---------MSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPAC 541
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF-RTMAWKNVVSW 243
L L++G IH I++ + + V +AL+DMY KC S+ AE +F +T K+ V+W
Sbjct: 542 ALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTW 601
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
++ Y QNG ++EA+ F M+ P+ T SV+ + A LA+ EG FH +
Sbjct: 602 NVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQ 661
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
G +S V N+L+ Y KCG + S +LFNEM+ +D VSW A++SGYA G + I L
Sbjct: 662 MGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIAL 721
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F M ++ D V+ + VLSAC GLVE+GR F M +Y I+P +HY CM+D+L
Sbjct: 722 FSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLG 781
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
RAG +E FI MP PDA W LL SCR+H NV++G+ A + L++L+P NPA +V+
Sbjct: 782 RAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVV 841
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LSSIYA G+W + R M + G++K PGCSW++ K++VH F D S P + ++
Sbjct: 842 LSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLL 901
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
L KM K GYVPD S VL +VE +K L HSE+LAI F LL PPG I++VKN
Sbjct: 902 WNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKN 961
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LRVC+DCH TK+ISKIT R I+VRDA RFH F++G CSC D+W
Sbjct: 962 LRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 137/492 (27%), Positives = 245/492 (49%), Gaps = 40/492 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V+WN +I+G + +AV + M G+ S ++ + ++L
Sbjct: 190 MPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGV-EPSSVSLLNLFPGICKLSNIEL 248
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
R IHG++ + F S V G L+D+Y+K G
Sbjct: 249 CRSIHGYVFRRDFSSAVSNG--LIDLYSKCGD---------------------------- 278
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
V+ +RR+F M D+D +SW TM+ G NG E ++LF +M+L + +++ + S
Sbjct: 279 ---VDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSA 335
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
A + LE+GK+IH ++ ++ V + L+ MY KC + A+ +F + +++
Sbjct: 336 FLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDL 395
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+W+A++ Q G EEA+ +F MQ ++P+ TL S++ +CA+L+ L+ G H
Sbjct: 396 VAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCF 455
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ + S ++ ALV+ Y KCG + FN M+ RD V+W +L++GYA+ G
Sbjct: 456 TVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNA 515
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
ID+F K+ + PD T++GV+ AC+ +++G ++VK G +ID
Sbjct: 516 IDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVK-LGFESDCHVKNALID 574
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL--LELDPYNP 478
+ ++ G L A+ NK F D + W ++++ +G+ K A S + L+ ++P
Sbjct: 575 MYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGH---AKEAISSFHQMRLENFHP 631
Query: 479 ASYVLLSSIYAS 490
S +S + A+
Sbjct: 632 NSVTFVSVLPAA 643
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/476 (27%), Positives = 224/476 (47%), Gaps = 51/476 (10%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P + WN +I + N+A+++Y M++ GL + TF+ +L + + G
Sbjct: 90 PNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGL-EPDKYTFTFVLKACTGALNLQEG 148
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
HG I + G VF+G+ LVDMY+K+G + A+ FD++P++
Sbjct: 149 VWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKR--------------- 193
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
D ++W MI GL Q+ EA+D FR M+L G+ + ++
Sbjct: 194 ----------------DVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLF 237
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
L +E + IH ++ R D V G L+D+Y KC + A VF M ++ V
Sbjct: 238 PGICKLSNIELCRSIHGYVFRRDFSSAVSNG--LIDLYSKCGDVDVARRVFDQMVDQDDV 295
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW M+ GY NGC E +++F M+ + + + S + A LE+G + HG +
Sbjct: 296 SWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCA 355
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
L + S I V+ L+ Y KCG E + +LF + RD V+W+A+++ + G E +
Sbjct: 356 LQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEAL 415
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
LF++M + +KP+ VTL+ +L AC+ L++ G+ VK + T ++ +
Sbjct: 416 SLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKA-DMDSDLSTGTALVSM 474
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
++ G A + N+M D + W +L I+G +IG DPYN
Sbjct: 475 YAKCGFFTAALTTFNRMS-SRDIVTWNSL-----INGYAQIG----------DPYN 514
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 171/327 (52%), Gaps = 4/327 (1%)
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+R +F + I W +MI ++ EA++++ M +GL D++TF VL AC G
Sbjct: 82 ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTG 141
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L L+EG H I R + +VF+G+ LVDMY K +K A VF M ++VV+W AM
Sbjct: 142 ALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAM 201
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ G Q+ EAV F +MQ G+EP +L ++ L+++E HG
Sbjct: 202 IAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDF 261
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
S VSN L+ Y KCG+++ + R+F++M +D+VSW +++GYA G E ++LF+K
Sbjct: 262 SS--AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDK 319
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M ++ ++V+ + A + +EKG+ +++ I M+ + ++ G
Sbjct: 320 MKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMV-MYAKCG 378
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSS 453
E+AK + D + W+ ++++
Sbjct: 379 ETEKAKQLFWGLQ-GRDLVAWSAIIAA 404
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 137/276 (49%), Gaps = 8/276 (2%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
+ +L++C L L QIHA II + K + + + L+++Y A SVF +
Sbjct: 35 YPRLLSSCKHLNPL---LQIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTP 90
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
+ + W +M+ Y ++ EA++++ M G+EPD +T V+ +C +L+EG
Sbjct: 91 NPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVW 150
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
FHG GL + + LV Y K G+++ + +F++M RD V+W A+++G ++
Sbjct: 151 FHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSED 210
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
E +D F M G++P V+L+ + + +E R + + + +
Sbjct: 211 PCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNG-- 268
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ID+ S+ G ++ A+ ++M D + W T+++
Sbjct: 269 -LIDLYSKCGDVDVARRVFDQM-VDQDDVSWGTMMA 302
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSWN ++SG+A HG + A+ +++LM ++ + ++F ++L V+
Sbjct: 694 MDHKDTVSWNAMLSGYAVHGHGDRAIALFSLM-QESQVQIDSVSFVSVLSACRHXGLVEE 752
Query: 61 GRQI-HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF 100
GR+I H K+ + + +VD+ + GL +D GF
Sbjct: 753 GRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGL-FDETLGF 792
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 243/643 (37%), Positives = 377/643 (58%), Gaps = 32/643 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V W ++S ++ + +A +V++ M G + +++L + V LG+ I
Sbjct: 227 DAVVWTAMVSCYSENDCPENAFRVFSKMRVSGC-KPNPFALTSVLKAAVCLPSVVLGKGI 285
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG +K + VG L+DMYAK G I DA+ F+ +P ++++
Sbjct: 286 HGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILL------------- 332
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ MI+ Q+ +A +LF + + ++++ SVL AC
Sbjct: 333 ------------------SFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQAC 374
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
++ L+ GKQIH I+ H+ ++FVG+AL+D Y KC + + +F ++ N VSW
Sbjct: 375 TNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWN 434
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++VG+ Q+G EEA+ +FC MQ + T SV+ +CA+ AS+ Q H +
Sbjct: 435 TIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKS 494
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
+ + N+L+ Y KCG I D+ ++F + RD +SW A++SGYA G+A + ++LF
Sbjct: 495 TFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELF 554
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
++M ++ +++T + +LS CS GLV G F+ M ++GI+P +HYTC++ +L R
Sbjct: 555 DRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGR 614
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AGRL +A FI +P P A+ W LLSSC IH NV +G+++AE +LE++P + +YVLL
Sbjct: 615 AGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLL 674
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S++YA+ G D V+ LR++MR GVRK PG SW++ K +H FS P I A L
Sbjct: 675 SNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAML 734
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
E LN K +EGY+PD++ VLHDV+ +K +ML HSE+LA+A+GL+ PPG PIR++KNL
Sbjct: 735 EWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNL 794
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R C DCH A ISKI +REI+VRD RFH F++G+CSCGD+W
Sbjct: 795 RSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 837
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/513 (26%), Positives = 241/513 (46%), Gaps = 49/513 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VS+ L+ HA G A ++ + +G +++ +TML ++ + L
Sbjct: 122 MPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEG-HEVNQFVLTTMLKLAIAMDAAGL 180
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+H K G FVGS L+D Y+ L+ DA+
Sbjct: 181 AGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEH---------------------- 218
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+F G+ KD++ WT M++ +N A +F +MR+ G + F SV
Sbjct: 219 ---------VFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSV 269
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A L ++ GK IH I+ + VG AL+DMY KC IK A F + + +V
Sbjct: 270 LKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDV 329
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+ + M+ Y Q+ +E+A ++F + R+ + P++++L SV+ +C N+ L+ G Q H
Sbjct: 330 ILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNH 389
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ G S + V NAL+ FY KC +++ S ++F+ + +EVSW +V G+++ G E
Sbjct: 390 AIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEA 449
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSAC-SRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ +F +M + + +VT VL AC S A + G+ + I + + + +I
Sbjct: 450 LSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGN--SLI 507
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D ++ G + +A + D I W ++S +HG AA++L D N +
Sbjct: 508 DTYAKCGYIRDALKVFQHL-MERDIISWNAIISGYALHGQ------AADALELFDRMNKS 560
Query: 480 -------SYVLLSSIYASKGKWDHVSQLRRTMR 505
++V L S+ +S G +H L +MR
Sbjct: 561 NVESNDITFVALLSVCSSTGLVNHGLSLFDSMR 593
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 119/462 (25%), Positives = 212/462 (45%), Gaps = 50/462 (10%)
Query: 61 GRQIHGHILKFG-FGSY-VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
GR +HGH+++ G G +F + L++MY KLG + A+R FD +PE+N+V + T++
Sbjct: 78 GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAH 137
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+RG E A LFR +R EG ++QF
Sbjct: 138 AQRGDFE-------------------------------AAAALFRRLRWEGHEVNQFVLT 166
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
++L + A +H+ + H N FVGS L+D Y C + AE VF + K
Sbjct: 167 TMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRK 226
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+ V WTAM+ Y +N C E A ++F M+ +G +P+ F L SV+ + L S+ G H
Sbjct: 227 DAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIH 286
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G ++ T + V AL+ Y KCG+I+D+ F + D + + ++S YA+ +
Sbjct: 287 GCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNE 346
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--- 415
+ +LF +++ + P+E +L VL AC+ ++ G+ + + I+ H+
Sbjct: 347 QAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQ-----IHNHAIKIGHESDLFV 401
Query: 416 -TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
++D ++ ++ + + + + + W T++ G +G+ A E+
Sbjct: 402 GNALMDFYAKCNDMDSSLKIFSSLR-DANEVSWNTIVVGFSQSG---LGEEALSVFCEMQ 457
Query: 475 PYN-PASYVLLSSIY---ASKGKWDHVSQLRRTMREKGVRKD 512
P + V SS+ AS H Q+ ++ + D
Sbjct: 458 AAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNND 499
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 172/352 (48%), Gaps = 36/352 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVY-NLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
+P+ D + + +IS +A A +++ LM L N + S++L ++ +D
Sbjct: 324 IPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPN--EYSLSSVLQACTNMVQLD 381
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G+QIH H +K G S +FVG+ L+D YAK + + + F L + N V +NT++ G
Sbjct: 382 FGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFS 441
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ GL E EA+ +F EM+ + Q T+ S
Sbjct: 442 QSGLGE-------------------------------EALSVFCEMQAAQMPCTQVTYSS 470
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL AC ++ QIH I ++ ++ +G++L+D Y KC I+ A VF+ + ++
Sbjct: 471 VLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERD 530
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQFH 298
++SW A++ GY +G + +A+++F M ++ +E +D T +++S C++ + G + F
Sbjct: 531 IISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFD 590
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM-NVRDEVSWTALVS 349
+ G+ + +V G+ G + D+ + ++ + + W AL+S
Sbjct: 591 SMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLS 642
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 249/698 (35%), Positives = 391/698 (56%), Gaps = 52/698 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VS+ L+ HA G A ++ + +G +++ +TML ++ + L
Sbjct: 122 MPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEG-HEVNQFVLTTMLKLAIAMDAAGL 180
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMIT---- 116
+H K G FVGS L+D Y+ L+ DA+ F+ + K+ V++ M++
Sbjct: 181 AGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSE 240
Query: 117 -------------------GLLRRGL----------------------------VEESRR 129
R+G+ ++++R
Sbjct: 241 NDCPENAFRCAQSCSLLAISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARL 300
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
F + D I + MI+ Q+ +A +LF + + ++++ SVL AC ++
Sbjct: 301 AFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQ 360
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
L+ GKQIH I+ H+ ++FVG+AL+D Y KC + + +F ++ N VSW ++VG
Sbjct: 361 LDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVG 420
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
+ Q+G EEA+ +FC MQ + T SV+ +CA+ AS+ Q H + +
Sbjct: 421 FSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNND 480
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
+ N+L+ Y KCG I D+ ++F + RD +SW A++SGYA G+A + ++LF++M
Sbjct: 481 TVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNK 540
Query: 370 HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLE 429
++ +++T + +LS C GLV G F+ M ++GI+P +HYTC++ +L RAGRL
Sbjct: 541 SNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLN 600
Query: 430 EAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYA 489
+A FI +P P A+ W LLSSC IH NV +G+++AE +LE++P + +YVLLS++YA
Sbjct: 601 DALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYA 660
Query: 490 SKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNR 549
+ G D V+ LR++MR GVRK PG SW++ K +H FS P I A LE LN
Sbjct: 661 AAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNL 720
Query: 550 KMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSD 609
K +EGY+PD++ VLHDV+ +K +ML HSE+LA+A+GL+ PPG PIR++KNLR C D
Sbjct: 721 KTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLD 780
Query: 610 CHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
CH A ISKI +REI+VRD RFH F++G+CSCGD+W
Sbjct: 781 CHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 818
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 112/462 (24%), Positives = 198/462 (42%), Gaps = 69/462 (14%)
Query: 61 GRQIHGHILKFG-FGSY-VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
GR +HGH+++ G G +F + L++MY KLG + A+R FD +PE+N+V + T++
Sbjct: 78 GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAH 137
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+RG E A LFR +R EG ++QF
Sbjct: 138 AQRGDFE-------------------------------AAAALFRRLRWEGHEVNQFVLT 166
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
++L + A +H+ + H N FVGS L+D Y C + AE VF + K
Sbjct: 167 TMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRK 226
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+ V WTAM+ Y +N C E A + SC+ LA H
Sbjct: 227 DAVVWTAMVSCYSENDCPENAFR-------------------CAQSCSLLAISCARQGIH 267
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G ++ T + V AL+ Y KCG+I+D+ F + D + + ++S YA+ +
Sbjct: 268 GCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNE 327
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--- 415
+ +LF +++ + P+E +L VL AC+ ++ G+ + + I+ H+
Sbjct: 328 QAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQ-----IHNHAIKIGHESDLFV 382
Query: 416 -TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
++D ++ ++ + + + + + W T++ G +G+ A E+
Sbjct: 383 GNALMDFYAKCNDMDSSLKIFSSLR-DANEVSWNTIVVGFSQSG---LGEEALSVFCEMQ 438
Query: 475 PYN-PASYVLLSSIY---ASKGKWDHVSQLRRTMREKGVRKD 512
P + V SS+ AS H Q+ ++ + D
Sbjct: 439 AAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNND 480
>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 750
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/646 (39%), Positives = 377/646 (58%), Gaps = 44/646 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
+ VS +IS +A G ++ AV +++ ML+ G S + ++T+L + R +D+GRQI
Sbjct: 146 NAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSSM-YTTLLKSLVNPRALDIGRQI 204
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H H+++ G S + + +V+MY K G + AKR FD+
Sbjct: 205 HAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQ---------------------- 242
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
M K ++WT ++ G Q G R+A+ LF ++ EG+ D F F VL AC
Sbjct: 243 ---------MAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKAC 293
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L L GKQIHA + + + V VG+ LVD Y KC S + A F+ + N VSW+
Sbjct: 294 ASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWS 353
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQ-RNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
A++ GY Q EEAVK F +++ +N + + FT S+ +C+ LA G Q H ++
Sbjct: 354 AIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIK 413
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
LI +AL+T Y KCG ++D+H +F M+ D V+WTA +SG+A +G A+E + L
Sbjct: 414 RSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRL 473
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
FEKM+S G+KP+ VT I VL+ACS AGLVE+G+HY + M+++Y + P DHY CMIDI +
Sbjct: 474 FEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYA 533
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
R+G L+EA F+ MPF PDA+ W LS C H N+E+GK A E L +LDP + A YVL
Sbjct: 534 RSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLDPEDTAGYVL 593
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
++Y GKW+ +++ + M E+ ++K+ CSWI+ K ++H F D P S +IY +
Sbjct: 594 PFNLYTWAGKWEEAAEVMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQSQEIYEK 653
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG--LPIRVV 601
L++ + G+ M + ++E+ + L HSE+LAIAFGL+ + PI+V
Sbjct: 654 LKEFD------GF---MEGDMFQCSMTERREQLLDHSERLAIAFGLISVNGNARAPIKVF 704
Query: 602 KNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLR C DCH K++S +T EI++RD+ RFH FK G+CSC D+W
Sbjct: 705 KNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 750
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 214/452 (47%), Gaps = 35/452 (7%)
Query: 10 NLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHIL 69
NL + + HG +N+A + + M K G+ ++S ++ + R + GR +H +
Sbjct: 50 NLHLVSLSKHGKLNEAFEFFQEMDKAGV-SVSLYSYQCLFEACRELRSLSHGRLLHNRM- 107
Query: 70 KFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRR 129
++G+ E P ++++ N ++ G +E++ +
Sbjct: 108 -------------------RMGI---------ENP--SVLLQNCVLQMYCECGSLEDADK 137
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
LF M D +++S TTMI+ + GL +A+ LF M G + ++L + A
Sbjct: 138 LFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRA 197
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
L+ G+QIHA +IR N + + +V+MY KC + A+ VF MA K V+WT ++VG
Sbjct: 198 LDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVG 257
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
Y Q G + +A+K+F ++ G+E D F V+ +CA+L L G Q H GL
Sbjct: 258 YTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECE 317
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
++V LV FY KC + E + R F E+ ++VSW+A++SGY + + E + F+ + S
Sbjct: 318 VSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRS 377
Query: 370 -HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
+ + + T + ACS G +K I + + +I + S+ G L
Sbjct: 378 KNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGE-SALITMYSKCGCL 436
Query: 429 EEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
++A M PD + W +S +GN
Sbjct: 437 DDAHEVFESMD-NPDIVAWTAFISGHAYYGNA 467
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/645 (37%), Positives = 385/645 (59%), Gaps = 38/645 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNL--SRITFSTMLIMSSSRRCVDLGRQI 64
V+WN LI+G++ +G A+K+Y M+ + ITFS+ L S + GR+I
Sbjct: 126 VTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREI 185
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
+ G+ S V + L++MY+K G +
Sbjct: 186 EARTVASGYASDSIVQNALINMYSKCGSL------------------------------- 214
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
E +R++F +K++D I+W TMI+G + G +A++LF+ M + TF +LTAC
Sbjct: 215 ESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTAC 274
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS-IKYAESVFRTMAWKNVVSW 243
L LE+G+ IH + + ++ ++ +G+ L++MY KC S ++ A VF + ++V++W
Sbjct: 275 TNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITW 334
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
++V Y Q G +++A+ IF MQ + P++ TL +V+S+CA L + +G H
Sbjct: 335 NILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIAS 394
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
+ + + N+L+ Y +CG+++D+ +F + + VSW+ L++ YA+ G + ++
Sbjct: 395 GRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEH 454
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F ++L GL D+VT++ LSACS G++++G F MV ++G+ P + H+ CM+D+LS
Sbjct: 455 FWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLS 514
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYV- 482
RAGRLE A++ I+ MPF PDA+ W +LLS C++H + + A+ L EL+ + S V
Sbjct: 515 RAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVT 574
Query: 483 LLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYA 542
LLS++YA G+WD V R+T + RK+PGCS+I+ VH F A D S P + I A
Sbjct: 575 LLSNVYAEAGRWDDV---RKTRNRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAA 631
Query: 543 ELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVK 602
E+++L+++M GYVPDM VLH+V+ EK +ML +HSEKLAIA+GL+ PPG P+ +VK
Sbjct: 632 EIKRLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVK 691
Query: 603 NLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
NLR C DCH A K+IS+I R+I+VRD+ RFH F+NG CSC D+W
Sbjct: 692 NLRACVDCHAAAKFISRIVGRKIVVRDSTRFHHFENGSCSCKDYW 736
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 233/464 (50%), Gaps = 39/464 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
+ VSW L+++ A +G +A+ Y M+ +GL F + + SS + + G+ +
Sbjct: 22 NSVSWTLIVAAFARNGHYREALGYYRRMVLEGL-RPDGAMFVVAIGVCSSSKDLKQGQLL 80
Query: 65 HGHILKFGFGSY-VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
H IL+ + + +G+ L+ MYA+ + A++ FDE+ +K +V +N +I G R
Sbjct: 81 HAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSR--- 137
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM---RLEGLAMDQFTFGSV 180
NG R A+ ++++M EG+ D TF S
Sbjct: 138 ----------------------------NGDHRGALKIYQDMVSKSPEGMKPDAITFSSA 169
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC + + +G++I A + + + + V +AL++MY KC S++ A VF + ++V
Sbjct: 170 LYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDV 229
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
++W M+ GY + G + +A+++F M N +P+ T ++++C NL LE+G H +
Sbjct: 230 IAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRK 289
Query: 301 SLVTGLISFITVSNALVTFYGKC-GNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
G S + + N L+ Y KC ++E++ ++F + RD ++W L+ Y ++G+A +
Sbjct: 290 VKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKD 349
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+D+F++M + P+E+TL VLSAC+ G +G+ ++ + + M
Sbjct: 350 ALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLM- 408
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
++ +R G L++ + + W+TL+++ HG+ G
Sbjct: 409 NMYNRCGSLDDTVGVFAAIR-DKSLVSWSTLIAAYAQHGHSRTG 451
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 188/335 (56%), Gaps = 7/335 (2%)
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G V ++ +F ++ +S+SWT ++ +NG REA+ +R M LEGL D F +
Sbjct: 6 GSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAI 65
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
C L++G+ +HA I+ + ++ +G+AL+ MY +C+ ++ A F M K +
Sbjct: 66 GVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTL 125
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNM---QRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
V+W A++ GY +NG A+KI+ +M G++PD T S + +C+ + + +G +
Sbjct: 126 VTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREI 185
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
R++ +G S V NAL+ Y KCG++E + ++F+ + RD ++W ++SGYAK G A
Sbjct: 186 EARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAA 245
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
+ ++LF++M + KP+ VT IG+L+AC+ +E+GR VKE+G
Sbjct: 246 TQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHR-KVKEHGYESDLVIGNV 304
Query: 418 MIDILSR-AGRLEEAKSFINKMPFPPDAIGWATLL 451
++++ ++ + LEEA+ ++ D I W L+
Sbjct: 305 LLNMYTKCSSSLEEARQVFERLR-TRDVITWNILI 338
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 145/307 (47%), Gaps = 21/307 (6%)
Query: 218 MYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFT 277
MY KC S+ A +VF + N VSWT ++ + +NG EA+ + M G+ PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 278 LGSVISSCANLASLEEGTQFHGRSLVTGLISF-ITVSNALVTFYGKCGNIEDSHRLFNEM 336
I C++ L++G H L T L+ F I + AL+T Y +C ++E + + F+EM
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 337 NVRDEVSWTALVSGYAKFGKANETIDLFEKMLS---HGLKPDEVTLIGVLSACSRAGLVE 393
+ V+W AL++GY++ G + +++ M+S G+KPD +T L ACS G +
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180
Query: 394 KGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+GR E G +I++ S+ G LE A+ +++ D I W T++S
Sbjct: 181 QGRE-IEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLK-NRDVIAWNTMISG 238
Query: 454 CRIHGNVEIGKWAAESLLEL-------DPY-NPASYVLLSSIYASKGKWDHVSQLRRTMR 505
G AA LEL DP N +++ L + + + + R ++
Sbjct: 239 YAKQG-------AATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVK 291
Query: 506 EKGVRKD 512
E G D
Sbjct: 292 EHGYESD 298
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 249/647 (38%), Positives = 384/647 (59%), Gaps = 34/647 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + V+W L+I+ ++ G ++DAV ++ +L + T +++L L
Sbjct: 208 MQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTP-DKFTLTSLLSACVELEFFSL 266
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H +++ G S VFVG LVDMYAK
Sbjct: 267 GKQLHSWVIRSGLASDVFVGCTLVDMYAK------------------------------- 295
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
VE SR++F M + +SWT +I+G +Q+ E+EAI LF M + + FTF SV
Sbjct: 296 SAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSV 355
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L GKQ+H I+ VG++L++MY + +++ A F + KN+
Sbjct: 356 LKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNL 415
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+S+ + S+E+ ++ G+ FT ++S A + ++ +G Q H
Sbjct: 416 ISYNTAADANAKALDSDESFNH--EVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHAL 473
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ +G + + ++NAL++ Y KCGN E + ++FN+M R+ ++WT+++SG+AK G A +
Sbjct: 474 IVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKA 533
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++LF +ML G+KP+EVT I VLSACS GL+++ +F M + I P +HY CM+D
Sbjct: 534 LELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVD 593
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L R+G L EA FIN MPF DA+ W T L SCR+H N ++G+ AA+ +LE +P++PA+
Sbjct: 594 LLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPAT 653
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
Y+LLS++YAS+G+WD V+ LR++M++K + K+ G SWI+ ++VH F D S P + +I
Sbjct: 654 YILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQARKI 713
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y EL++L K+ GY+P+ VLHDVE +K + L HSEK+A+A+ L+ P PIRV
Sbjct: 714 YDELDELALKIKNLGYIPNTDFVLHDVEDEQKEQYLFQHSEKIAVAYALISTPKPKPIRV 773
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCH A KYIS +T REI+VRDA RFH K+G+CSC D+W
Sbjct: 774 FKNLRVCGDCHTAIKYISIVTGREIVVRDANRFHHIKDGKCSCNDYW 820
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 138/459 (30%), Positives = 229/459 (49%), Gaps = 41/459 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNL--SRITFSTMLIMSSSRRCVDLGR 62
D VSW+ +IS A++ + A+ + ML+ + + F+ +L S+ G
Sbjct: 106 DLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGL 165
Query: 63 QIHGHILKFG-FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
I +LK G F S+V VG L+DM+ K GL
Sbjct: 166 AIFAFLLKTGYFDSHVCVGCALIDMFTKGGLD---------------------------- 197
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
++ +R +F M+ K+ ++WT MIT Q GL +A+DLF + + D+FT S+L
Sbjct: 198 --IQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLL 255
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+AC L GKQ+H+++IR+ +VFVG LVDMY K +++ + +F TM NV+
Sbjct: 256 SACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVM 315
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SWTA++ GY Q+ +EA+K+FCNM + P+ FT SV+ +CA+L G Q HG++
Sbjct: 316 SWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQT 375
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ GL + V N+L+ Y + G +E + + FN + ++ +S+ AK ++E+
Sbjct: 376 IKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDES- 434
Query: 362 DLFEKMLSH-GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE-YGIRPIHDHYTCMI 419
F + H G+ T +LS + G + KG ++VK +G ++ +I
Sbjct: 435 --FNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINN--ALI 490
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ S+ G E A N M + + I W +++S HG
Sbjct: 491 SMYSKCGNKEAALQVFNDMGY-RNVITWTSIISGFAKHG 528
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 141/280 (50%), Gaps = 9/280 (3%)
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW-- 237
+L AC LE GK +H +I + + + ++L+ +Y KC + A S+FR M
Sbjct: 45 LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHK 104
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNM---QRNGIEPDDFTLGSVISSCANLASLEEG 294
+++VSW+A++ + N A+ F +M RN I P+++ +++ SC+N G
Sbjct: 105 RDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTG 164
Query: 295 TQFHGRSLVTGLI-SFITVSNALVTFYGKCG-NIEDSHRLFNEMNVRDEVSWTALVSGYA 352
L TG S + V AL+ + K G +I+ + +F++M ++ V+WT +++ Y+
Sbjct: 165 LAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYS 224
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
+ G ++ +DLF ++L PD+ TL +LSAC G+ +++ +
Sbjct: 225 QLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVF 284
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
T ++D+ +++ +E ++ N M + + W L+S
Sbjct: 285 VGCT-LVDMYAKSAAVENSRKIFNTM-LHHNVMSWTALIS 322
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/603 (39%), Positives = 363/603 (60%), Gaps = 32/603 (5%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
++++L S + ++ G+Q+H + + G + + + LV+ Y+ + +A FD++P
Sbjct: 61 YASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIP 120
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
+ N+ ++N +I + +W NG AI L+ +
Sbjct: 121 KGNLFLWNVLIR----------------------AYAW---------NGPHETAISLYHQ 149
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M GL D FT VL AC L + EG+ IH +IR+ + +VFVG+ALVDMY KC
Sbjct: 150 MLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGC 209
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A VF + ++ V W +ML Y QNG +E++ + C M G+ P + TL +VISS
Sbjct: 210 VVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISS 269
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
A++A L G + HG G V AL+ Y KCG+++ + LF + + VSW
Sbjct: 270 SADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSW 329
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
A+++GYA G A E +DLFE+M+ +PD +T +G L+ACSR L+++GR + +MV+
Sbjct: 330 NAIITGYAMHGLAVEALDLFERMMKEA-QPDHITFVGALAACSRGRLLDEGRALYNLMVR 388
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
+ I P +HYTCM+D+L G+L+EA I +M PD+ W LL+SC+ HGNVE+ +
Sbjct: 389 DCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAE 448
Query: 465 WAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRV 524
A E L+EL+P + +YV+L+++YA GKW+ V++LR+ M +KG++K+ CSWI+ K++V
Sbjct: 449 VALEKLIELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDKGIKKNIACSWIEVKNKV 508
Query: 525 HIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLA 584
+ F + D S P S IYAEL++L M + GYVPD SV HDVE EK M+ HSE+LA
Sbjct: 509 YAFLSGDVSHPNSGAIYAELKRLEGLMREAGYVPDTGSVFHDVEEDEKTDMVCSHSERLA 568
Query: 585 IAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCG 644
IAFGL+ PG + + KNLR+C DCH A K+ISKIT+REI VRD R+H F++G CSCG
Sbjct: 569 IAFGLISTLPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFRHGLCSCG 628
Query: 645 DFW 647
D+W
Sbjct: 629 DYW 631
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 182/370 (49%), Gaps = 37/370 (10%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN+LI +A +G A+ +Y+ ML+ GL T +L S+ + GR IH +
Sbjct: 127 WNVLIRAYAWNGPHETAISLYHQMLEYGL-KPDNFTLPFVLKACSALSTIGEGRVIHERV 185
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
++ G+ VFVG+ LVDMYAK G + DA+ FD++ +++ V++N
Sbjct: 186 IRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWN---------------- 229
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
+M+ QNG E++ L EM +G+ + T +V+++ +
Sbjct: 230 ---------------SMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIA 274
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
L G++IH F R+ + N V +AL+DMY KC S+K A +F + K VVSW A++
Sbjct: 275 CLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIIT 334
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
GY +G + EA+ +F M + +PD T +++C+ L+EG + + I+
Sbjct: 335 GYAMHGLAVEALDLFERMMKEA-QPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRIN 393
Query: 309 -FITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKANETIDLFEK 366
+ +V G CG +++++ L +M+V D W AL++ G EK
Sbjct: 394 PTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEK 453
Query: 367 MLSHGLKPDE 376
++ L+PD+
Sbjct: 454 LIE--LEPDD 461
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 152/286 (53%), Gaps = 2/286 (0%)
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
+ + + S+L +C ALE GKQ+HA + + N+ + + LV+ Y C S++ A +F
Sbjct: 57 NHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLF 116
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
+ N+ W ++ Y NG E A+ ++ M G++PD+FTL V+ +C+ L+++
Sbjct: 117 DKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIG 176
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
EG H R + +G + V ALV Y KCG + D+ +F+++ RD V W ++++ YA
Sbjct: 177 EGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYA 236
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
+ G +E++ L +M + G++P E TL+ V+S+ + + GR + +G +
Sbjct: 237 QNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWR-HGFQYND 295
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
T +ID+ ++ G ++ A ++ + W +++ +HG
Sbjct: 296 KVKTALIDMYAKCGSVKVACVLFERLR-EKRVVSWNAIITGYAMHG 340
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 118/274 (43%), Gaps = 39/274 (14%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V WN +++ +A +G ++++ + M G+ + T T++ S+ C+ GR+I
Sbjct: 224 DAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGV-RPTEATLVTVISSSADIACLPHGREI 282
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG + GF V + L+DMYAK G + A F+ L EK +V +N +ITG GL
Sbjct: 283 HGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLA 342
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
EA+DLF M E D TF L AC
Sbjct: 343 V-------------------------------EALDLFERMMKEAQP-DHITFVGALAAC 370
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVG--SALVDMYCKCKSIKYAESVFRTM-AWKNVV 241
L+EG+ ++ ++R D + N V + +VD+ C + A + R M +
Sbjct: 371 SRGRLLDEGRALYNLMVR-DCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSG 429
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDD 275
W A+L +G E A + +EPDD
Sbjct: 430 VWGALLNSCKTHGNVELAEVALEKLIE--LEPDD 461
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 243/603 (40%), Positives = 356/603 (59%), Gaps = 32/603 (5%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
++++L + ++ G+Q+H G + + LV +YA + +A+ FD++P
Sbjct: 50 YTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIP 109
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
++N+ + W +I G NG AI L+ +
Sbjct: 110 KQNLFL-------------------------------WNVLIRGYAWNGPHDNAIILYHK 138
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M GL D FT VL AC L A+ EG+ IH ++I++ + ++FVG+AL+DMY KC
Sbjct: 139 MLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGC 198
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A VF + ++ V W +ML Y QNG +E++ + M NG+ P + TL +VISS
Sbjct: 199 VMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISS 258
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
A++A L G + HG G S V AL+ Y KCG+++ + LF + + VSW
Sbjct: 259 SADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSW 318
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
A+++GYA G A +DLF+KM +PD +T +GVL+ACSR L+++GR + +MV+
Sbjct: 319 NAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVR 377
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
+YGI P HYTCMID+L G+L+EA I M PD+ W LL+SC+IHGNVE+ +
Sbjct: 378 DYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAE 437
Query: 465 WAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRV 524
A E L+EL+P + +YV+L+++YA GKW+ V +LR+ M +K ++K+ CSWI+ K++V
Sbjct: 438 LALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKV 497
Query: 525 HIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLA 584
+ F A D S SD IYAEL++L M + GY PD SV HDVE EK M+ HSE+LA
Sbjct: 498 YAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFHDVEEDEKTSMVCSHSERLA 557
Query: 585 IAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCG 644
IAFGL+ PG + + KNLR+C DCH A K+ISKI +REI VRD R+H FK+G CSCG
Sbjct: 558 IAFGLISTSPGTRLLITKNLRICEDCHVAIKFISKIMEREITVRDVNRYHSFKHGMCSCG 617
Query: 645 DFW 647
D W
Sbjct: 618 DHW 620
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 188/378 (49%), Gaps = 37/378 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + WN+LI G+A +G ++A+ +Y+ ML GL T +L S+ +
Sbjct: 108 IPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGL-RPDNFTLPFVLKACSALSAIGE 166
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR IH +++K G+ +FVG+ L+DMYAK G + DA R FD++ ++ V++N+M
Sbjct: 167 GRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSM------ 220
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ QNG E+I L REM G+ + T +V
Sbjct: 221 -------------------------LAAYAQNGHPDESISLCREMAANGVRPTEATLVTV 255
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+++ + L G++IH F R+ + N V +AL+DMY KC S+K A ++F + K V
Sbjct: 256 ISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRV 315
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW A++ GY +G + A+ +F M++ PD T V+++C+ L+EG +
Sbjct: 316 VSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNL 374
Query: 301 SLVT-GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKAN 358
+ G+ + ++ G CG +++++ L M+V+ D W AL++ G
Sbjct: 375 MVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVE 434
Query: 359 ETIDLFEKMLSHGLKPDE 376
EK++ L+PD+
Sbjct: 435 LAELALEKLIE--LEPDD 450
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 150/285 (52%), Gaps = 2/285 (0%)
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
+ + S+L +C AL GKQ+HA N + + LV +Y S+ A ++F
Sbjct: 47 HYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFD 106
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE 293
+ +N+ W ++ GY NG + A+ ++ M G+ PD+FTL V+ +C+ L+++ E
Sbjct: 107 KIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGE 166
Query: 294 GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK 353
G H + +G + V AL+ Y KCG + D+ R+F+++ VRD V W ++++ YA+
Sbjct: 167 GRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQ 226
Query: 354 FGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
G +E+I L +M ++G++P E TL+ V+S+ + + GR + +G +
Sbjct: 227 NGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWR-HGFQSNDK 285
Query: 414 HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
T +ID+ ++ G ++ A + ++ + W +++ +HG
Sbjct: 286 VKTALIDMYAKCGSVKVALALFERLR-EKRVVSWNAIITGYAMHG 329
>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
gi|194705708|gb|ACF86938.1| unknown [Zea mays]
gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 249/558 (44%), Positives = 342/558 (61%), Gaps = 6/558 (1%)
Query: 95 DAKRGFDELPEKNIVMYNTMITGLLR--RGLVEESRRLFRGMKDKDSISWTTMITGLMQN 152
DA LP ++ YNT++ L R RGL +R LF M +D SW+ +++ +++
Sbjct: 79 DALALLSSLPSTDVCSYNTLVAALGRSPRGLAS-ARALFDRMPRRDHFSWSAIVSAHVRH 137
Query: 153 GLEREAIDLFREMRLE---GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNV 209
G R A+ ++R M E A ++FT S L A G+++H ++R +
Sbjct: 138 GQPRAALAIYRRMLREPGGSGADNEFTASSALAAATAARCARAGRELHCHVVRRGIDADA 197
Query: 210 FVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN 269
V SAL DMY K + A SVF M ++VVSWTAML Y G E ++F M R+
Sbjct: 198 VVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFDAGRDGEGFRLFVRMMRS 257
Query: 270 GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
GI P++FT V+ +CA S + G Q HGR + +ALV Y K G++ +
Sbjct: 258 GILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGTA 317
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
R+F M D VSWTA++SGYA+ G+ +E + F+ +LS G +PD VT +GVLSAC+ A
Sbjct: 318 MRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSACAHA 377
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
GLV+KG F + +YGI DHY C+ID+LSR+G E A+ IN MP P+ WA+
Sbjct: 378 GLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSRSGLFERAEDMINTMPVKPNKFLWAS 437
Query: 450 LLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
LL CRIH NV + WAAE+L E++P NPA+YV L++IYAS G +D V +RRTM +G+
Sbjct: 438 LLGGCRIHKNVRLAWWAAEALFEIEPENPATYVTLANIYASVGLFDEVENMRRTMELRGI 497
Query: 510 RKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVEL 569
K P SWI+ +RVH+F D S P +++IYA L+KL KM +EGYV D VLHDVE
Sbjct: 498 TKMPASSWIEVGTRVHVFLVGDKSHPQAEEIYALLKKLYVKMREEGYVADTGFVLHDVED 557
Query: 570 SEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRD 629
+K + + +HSE+LA+AFG++ P G PI+V KNLR+C DCH K ISKI QREI+VRD
Sbjct: 558 EQKQQDIGYHSERLAVAFGIIATPKGSPIKVFKNLRICGDCHTTIKLISKIVQREIIVRD 617
Query: 630 AVRFHLFKNGECSCGDFW 647
+ RFH FKNG CSC D+W
Sbjct: 618 SNRFHHFKNGSCSCRDYW 635
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 171/354 (48%), Gaps = 35/354 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKD--GLGNLSRITFSTMLIMSSSRRCV 58
MP D SW+ ++S H HG A+ +Y ML++ G G + T S+ L +++ RC
Sbjct: 119 MPRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSALAAATAARCA 178
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
GR++H H+++ G + V S L DMYAK G + DA+ FD +P +++V
Sbjct: 179 RAGRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVV--------- 229
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
SWT M+ G + E LF M G+ ++FT+
Sbjct: 230 ----------------------SWTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYA 267
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
VL AC + + GKQ+H + ++ D+ F GSALV MY K + A VFR M
Sbjct: 268 GVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKP 327
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-F 297
++VSWTAM+ GY QNG +EA+ F + +G PD T V+S+CA+ +++G F
Sbjct: 328 DLVSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIF 387
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
H G+ ++ + G E + + N M V+ ++ W +L+ G
Sbjct: 388 HSIKDKYGIEHTADHYACVIDLLSRSGLFERAEDMINTMPVKPNKFLWASLLGG 441
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 268/716 (37%), Positives = 399/716 (55%), Gaps = 76/716 (10%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V WNLLI +A +G +A+ +Y ML G+ +R TF +L S+ + GR+IH
Sbjct: 85 VLWNLLIRAYAWNGPYEEAIDLYYKMLGYGI-TPNRFTFPFVLKACSALKEASEGREIHC 143
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF-------------------------D 101
I + S V+V + LVD YAK G + DAK F D
Sbjct: 144 DIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYD 203
Query: 102 ELPEKNIVMYN------TMITGLL--------------------RRGLV----------- 124
E+ + M N + I G+L RRG V
Sbjct: 204 EVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILD 263
Query: 125 --------EESRRLFRGMKD-KDSISWTTMITGLMQNGLEREAIDLFREMRL---EGLAM 172
+ +RR+F M K+ ++W+ M+ + REA++LF ++ + + + +
Sbjct: 264 VYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVL 323
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
T +V+ C L L G +H + I++ ++ VG+ L+ MY KC I A F
Sbjct: 324 SAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFF 383
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
M ++ VS+TA++ GY QNG SEE +++F MQ +GI P+ TL SV+ +CA+LA L
Sbjct: 384 NEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLH 443
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
G+ H +++ G + + NAL+ Y KCG I+ + ++F+ M+ R VSW ++ Y
Sbjct: 444 YGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYG 503
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
G E + LF+ M S GLKPD+VT I ++SACS +GLV +G+++F M +++GI P
Sbjct: 504 IHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRM 563
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLE 472
+HY CM+D+LSRAG +E SFI KMP PD W LLS+CR++ NVE+G+ ++ + +
Sbjct: 564 EHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQK 623
Query: 473 LDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDW 532
L P + ++VLLS++Y++ G+WD +Q+R T +E+G K PGCSWI+ VH F +
Sbjct: 624 LGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEISGVVHTFLGGGY 683
Query: 533 SS-PYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLF 591
S P QI +L++L +M + GY + S V DVE EK ++L +HSEKLAIAFG+L
Sbjct: 684 RSHPQLTQISNKLDELLVEMKRLGYQAESSYVFQDVEEEEKERVLLYHSEKLAIAFGILS 743
Query: 592 IPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ P I V KNLRVC DCH A K+IS +T+R+I VRDA RFH FK+G C+CGDFW
Sbjct: 744 LSPDKHIIVTKNLRVCGDCHTAIKFISLVTKRDITVRDASRFHHFKDGICNCGDFW 799
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 210/446 (47%), Gaps = 55/446 (12%)
Query: 61 GRQIHGHILKF-------GFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPE--KNIVMY 111
G+ IH H+LK ++ LVD+Y + A+ FD++P KN+V++
Sbjct: 28 GKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARHVFDKMPHRPKNVVLW 87
Query: 112 NTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLA 171
N +I + +W NG EAIDL+ +M G+
Sbjct: 88 NLLIR----------------------AYAW---------NGPYEEAIDLYYKMLGYGIT 116
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
++FTF VL AC L EG++IH I R + NV+V +ALVD Y KC + A+ V
Sbjct: 117 PNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEV 176
Query: 232 FRTMAWKNVVSWTAMLVGYG-QNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS 290
F M ++VV+W +M+ G+ G +E ++ MQ N + P+ T+ V+ + A + S
Sbjct: 177 FDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQ-NDVSPNSSTIVGVLPAVAQVNS 235
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN-VRDEVSWTALVS 349
L G + HG + G + + V ++ YGKC I+ + R+F+ M V++EV+W+A+V
Sbjct: 236 LRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVG 295
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPD-----EVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
Y E ++LF ++L LK D VTL V+ C+ + G +K
Sbjct: 296 AYVVCDFMREALELFCQLLM--LKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIK 353
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG- 463
+ + T ++ + ++ G + A F N+M DA+ + ++S +GN E G
Sbjct: 354 SGFVLDLMVGNT-LLSMYAKCGIINGAMRFFNEMDL-RDAVSFTAIISGYVQNGNSEEGL 411
Query: 464 KWAAESLLELDPYNPASYVLLSSIYA 489
+ E ++L NP L S + A
Sbjct: 412 RMFLE--MQLSGINPEKATLASVLPA 435
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 232/603 (38%), Positives = 363/603 (60%), Gaps = 32/603 (5%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
+ +++ + R +D R IH H+ F VF+ + L+ +Y K G + DA
Sbjct: 67 YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADA-------- 118
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
RR+F GM +D SWT++I G QN + EA+ L
Sbjct: 119 -----------------------RRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPG 155
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M + FTF S+L A G + G+QIHA ++ D D+V+VGSAL+DMY +C
Sbjct: 156 MLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGR 215
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A +VF + KN VSW A++ G+ + G E + +F MQRNG E FT SV S+
Sbjct: 216 MDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSA 275
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
A + +LE+G H + +G V N ++ Y K G++ D+ ++F+ ++ +D V+W
Sbjct: 276 IAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTW 335
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
++++ +A++G E + FE+M G+ +++T + +L+ACS GLV++G+ YF++M K
Sbjct: 336 NSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMM-K 394
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
EY + P DHY ++D+L RAG L +A FI KMP P A W LL SCR+H N +IG+
Sbjct: 395 EYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQ 454
Query: 465 WAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRV 524
+AA+ + ELDP + VLL +IYAS G+WD +++R+ M+ GV+K+P CSW++ ++ V
Sbjct: 455 FAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSV 514
Query: 525 HIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLA 584
H+F A+D + P S++IY + E+++ ++ K GYVP+ VL V+ E+ L +HSEK+A
Sbjct: 515 HMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIA 574
Query: 585 IAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCG 644
+AF L+ +P G IR++KN+R+C DCH+A +YISK+ +REI+VRD RFH F +G CSCG
Sbjct: 575 LAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTNRFHHFSSGSCSCG 634
Query: 645 DFW 647
D+W
Sbjct: 635 DYW 637
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 186/378 (49%), Gaps = 35/378 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SW LI+G+A + ++A+ + ML+ G + TF+++L + + +
Sbjct: 125 MPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLR-GRFKPNGFTFASLLKAAGASASSGI 183
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G QIH +K+ + V+VGS L+DMYA+ G + A FD+L KN V +N +I G R
Sbjct: 184 GEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFAR 243
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+G E TT++ +F EM+ G FT+ SV
Sbjct: 244 KGDGE-----------------TTLL--------------MFAEMQRNGFEATHFTYSSV 272
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+A G+ ALE+GK +HA +I++ + + FVG+ ++DMY K S+ A VF + K+V
Sbjct: 273 FSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDV 332
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+W +ML + Q G EAV F M++ G+ + T S++++C++ ++EG Q+
Sbjct: 333 VTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDM 392
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKANE 359
L I +V G+ G + D+ +M ++ + W AL+ G + K N
Sbjct: 393 MKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALL-GSCRMHK-NA 450
Query: 360 TIDLFEKMLSHGLKPDEV 377
I F L PD+
Sbjct: 451 KIGQFAADHVFELDPDDT 468
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 164/313 (52%), Gaps = 5/313 (1%)
Query: 146 ITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH 205
+ G+ R+ +D + LA + S++TAC +L++ + IHA + +
Sbjct: 39 VPAAASTGIIRDTLD---SVDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQF 95
Query: 206 KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCN 265
+VF+ ++L+ +YCKC ++ A VF M +++ SWT+++ GY QN +EA+ +
Sbjct: 96 AGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPG 155
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M R +P+ FT S++ + AS G Q H ++ + V +AL+ Y +CG
Sbjct: 156 MLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGR 215
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
++ + +F+++ ++ VSW AL++G+A+ G T+ +F +M +G + T V SA
Sbjct: 216 MDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSA 275
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
+ G +E+G+ M+K G R ++D+ +++G + +A+ +++ D +
Sbjct: 276 IAGIGALEQGKWVHAHMIKS-GERLSAFVGNTILDMYAKSGSMIDARKVFDRVD-KKDVV 333
Query: 446 GWATLLSSCRIHG 458
W ++L++ +G
Sbjct: 334 TWNSMLTAFAQYG 346
>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
Length = 847
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 254/650 (39%), Positives = 383/650 (58%), Gaps = 37/650 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW L+SG + + DA+ + M + G+ +R S+ +++
Sbjct: 232 MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAP-TRFALSSAARAAAALGAPLR 290
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
R GF + +FV S L DMY+K GL+
Sbjct: 291 ARSCTASA-SVGFDTELFVASNLADMYSKCGLL--------------------------- 322
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL-AMDQFTFGS 179
E+ R+F M KD+++WT MI G +NG A+ FR+M+ EGL DQ F S
Sbjct: 323 ----SEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCS 378
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR--TMAW 237
VL+A GGL K IH + + + V V +AL+DMY K ++ A V + W
Sbjct: 379 VLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGW 438
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
NVVS T+M+ GY + C EEA+ I+ ++R G+EP++FT S+I CA A LE+G Q
Sbjct: 439 -NVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQL 497
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H + + T LI V + LV YGKCG I S +LFNE+ R +++W A+++ +A+ G
Sbjct: 498 HAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHG 557
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
E I F++M+ G++P+ + + +L+ACS AGLV++G YF M + +GI P +HY+C
Sbjct: 558 REAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSC 617
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
+ID RAGRL+EA FI++MP P+A GW +LL +CR+ G+ E+G+ AA++L++L+P N
Sbjct: 618 IIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGN 677
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
+V LS IYAS G+W+ V +R+ MR+ ++K PG SW+ + H+F ++DWS P
Sbjct: 678 TGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQ 737
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
IY +LE+L ++ +EGY+PD S + ++E K ++L +HSE++A+AF L+ +P P
Sbjct: 738 KDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKP 797
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
I V KNLR+C DCH A K+I K+ +R+I+VRD RFH F NG CSCGD+W
Sbjct: 798 IIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 847
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 121/481 (25%), Positives = 208/481 (43%), Gaps = 28/481 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW L+SG + + DA+ + M + G+ +R+ + T + +
Sbjct: 82 MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAP-TRLIYETKFHNTLGPKHTLA 140
Query: 61 GRQIH-GHILKFGFGSYVFVGSP---------LVDMYAKLGLIYDAKRG--------FDE 102
H G L + P L + G D +RG
Sbjct: 141 ASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSG 200
Query: 103 LPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLF 162
+ + N +IT + + RLF M ++++SWTT+++GL QN + +A+ F
Sbjct: 201 AAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAF 260
Query: 163 REMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC 222
MR G+A +F S A L A + A +FV S L DMY KC
Sbjct: 261 AAMRRAGVAPTRFALSSAARAAAALGAPLRARSCTASA-SVGFDTELFVASNLADMYSKC 319
Query: 223 KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSV 281
+ A VF M K+ V+WTAM+ GY +NG E AV F +M+R G + D SV
Sbjct: 320 GLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSV 379
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN-EMNVRD 340
+S+ L H G + V NAL+ Y K ++E + R+ + +
Sbjct: 380 LSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWN 439
Query: 341 EVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
VS T+++ GY + E + ++ ++ G++P+E T ++ C+ L+E+G
Sbjct: 440 VVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHA 499
Query: 401 IMVKEYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
++K IR D + + ++D+ + G + + N++ + D I W +++ HG
Sbjct: 500 QVIKTDLIR---DSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTD-IAWNAVINVFAQHG 555
Query: 459 N 459
+
Sbjct: 556 H 556
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 172/410 (41%), Gaps = 73/410 (17%)
Query: 110 MYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG 169
+ N +IT + + RLF M ++++SWTT+++GL QN + +A+ F MR G
Sbjct: 58 LANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAG 117
Query: 170 LAMDQFTF------------------------------------------------GSVL 181
+A + + S+L
Sbjct: 118 VAPTRLIYETKFHNTLGPKHTLAASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLL 177
Query: 182 TACGGLLALEEGKQIHA-FIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+CG L G+ +HA ++ + F+ + L+ MY C + A +F M +N
Sbjct: 178 QSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNA 237
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWT ++ G QN +A+ F M+R G+ P F L S + A L +
Sbjct: 238 VSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSCTAS 297
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ V G + + V++ L Y KCG + ++ R+F++M +D V+WTA++ GYAK G
Sbjct: 298 ASV-GFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAA 356
Query: 361 IDLFEKMLSHGL-KPDEVTLIGVLSACS--RAGLVEKGRHY------FEIMVKEYGIRPI 411
+ F M GL D+ VLSA + G + K H FE+ E +R
Sbjct: 357 VLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFEL---EVAVR-- 411
Query: 412 HDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+ID+ +++ +E A + P GW + + I G +E
Sbjct: 412 ----NALIDMYAKSMDVESASRVLKIDPG-----GWNVVSGTSMIDGYIE 452
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 143/369 (38%), Gaps = 53/369 (14%)
Query: 177 FGSVLTACGGLLALEEGKQIHA-FIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
S+L +CG L G+ +HA ++ + F+ + L+ MY C + A +F M
Sbjct: 23 LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM 82
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDF--------TLG-------- 279
+N VSWT ++ G QN +A+ F M+R G+ P TLG
Sbjct: 83 PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAAS 142
Query: 280 --------------------------------SVISSCANLASLEEGTQFHGRSLVTGLI 307
S++ SC L G H R +++G
Sbjct: 143 HCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAA 202
Query: 308 SFIT-VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ T ++N L+T Y C ++ + RLF M R+ VSWT LVSG ++ + + F
Sbjct: 203 AASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAA 262
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M G+ P L A + G + R G + + D+ S+ G
Sbjct: 263 MRRAGVAPTRFALSSAARAAAALGAPLRARSC--TASASVGFDTELFVASNLADMYSKCG 320
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
L EA ++MP DA+ W ++ +G++E + + +V S
Sbjct: 321 LLSEACRVFDQMP-QKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSV 379
Query: 487 IYASKGKWD 495
+ AS G D
Sbjct: 380 LSASGGLKD 388
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 254/621 (40%), Positives = 361/621 (58%), Gaps = 64/621 (10%)
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+G+++H HI+K G + + L++MY K GLI DA
Sbjct: 21 IGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDA----------------------- 57
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAMDQFTFG 178
LF + +D ISW +++T Q L + +F M + +GL D + F
Sbjct: 58 --------LNLFNQLPHRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFA 109
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
++ AC L A+++GKQ+HA I + D+ V S+LVDMY KC VF +++ K
Sbjct: 110 CLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSK 169
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIF-------------------------------CNMQ 267
N +SWTAM+ GY Q+G +A+++F M+
Sbjct: 170 NSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMR 229
Query: 268 RNGIE-PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
GI+ D F L S+I + ANLA L G Q H ++ G S + VSNALV Y KC ++
Sbjct: 230 SKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDV 289
Query: 327 EDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSAC 386
+ ++F M RD VSWT+++ G A+ G A E + L+ +MLS GLKP+EVT +G++ AC
Sbjct: 290 LAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYAC 349
Query: 387 SRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIG 446
S GLV KGR++F M+K+YGI P HYTC++D+LSR+G LEEA++ I MPF PD
Sbjct: 350 SHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEAT 409
Query: 447 WATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMRE 506
WA LLS+C H N IG A+ LL L P +P++Y+LLS+IYAS W+ VS++RR M
Sbjct: 410 WAALLSACNHHRNTLIGIRVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAA 469
Query: 507 KGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHD 566
V+K+PG S I +F A + S P ++I+ LE+L+ +M K GY+PD SSVLHD
Sbjct: 470 MEVKKEPGYSCIVLGKESQVFLAGETSHPAKEEIFGLLEELDAEMKKRGYIPDTSSVLHD 529
Query: 567 VELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREIL 626
+E EK + L HSE+LA+A+GLL PG+ + +VKNLRVC DCH K+IS I +REI+
Sbjct: 530 LEQQEKERQLFWHSERLAVAYGLLKGIPGMVLHIVKNLRVCGDCHTVLKFISIIVKREIV 589
Query: 627 VRDAVRFHLFKNGECSCGDFW 647
VRDA R+H FK+G+CSC +FW
Sbjct: 590 VRDANRYHHFKDGKCSCNNFW 610
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 205/388 (52%), Gaps = 7/388 (1%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLK-DGLGNLSRITFSTMLIMSSSRRCVD 59
+P D +SW +++ + + + ++ M K DGL F+ ++ + +
Sbjct: 64 LPHRDPISWASILTANNQANLPHLTLSMFPAMFKQDGL-QPDHYVFACLVKACAILGAMK 122
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G+Q+H + V S LVDMYAK GL + FD + KN + + MI+G
Sbjct: 123 QGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYA 182
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL-AMDQFTFG 178
+ G ++ +LF+ M K+ +SWT +I+GL+Q+G ++ LF EMR +G+ +D F
Sbjct: 183 QSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILS 242
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
S++ A L L GKQIH +I ++ ++FV +ALVDMY KC + A+ +F M +
Sbjct: 243 SIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQR 302
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
++VSWT+++VG Q+G +EEA+ ++ M G++P++ T +I +C+++ + +G F
Sbjct: 303 DIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFF 362
Query: 299 GRSLVT-GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGK 356
+ G+ + L+ + G++E++ L M + DE +W AL+S
Sbjct: 363 NSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRN 422
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLS 384
I + + +LS LKP++ + +LS
Sbjct: 423 TLIGIRVADHLLS--LKPEDPSTYILLS 448
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 105/188 (55%), Gaps = 1/188 (0%)
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC + GK++H II+ + + L++MY KC I+ A ++F + ++
Sbjct: 10 LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDP 69
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+SW ++L Q + +F M +++G++PD + ++ +CA L ++++G Q H
Sbjct: 70 ISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHA 129
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+V+ + V ++LV Y KCG + +F+ ++ ++ +SWTA++SGYA+ G+ +
Sbjct: 130 TFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLD 189
Query: 360 TIDLFEKM 367
I LF+KM
Sbjct: 190 AIQLFQKM 197
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 107/233 (45%), Gaps = 14/233 (6%)
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE 341
+ +CA S G + H + TG+ ++SN L+ YGKCG I+D+ LFN++ RD
Sbjct: 10 LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDP 69
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSH-GLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
+SW ++++ + + T+ +F M GL+PD ++ AC+ G +++G+
Sbjct: 70 ISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHA 129
Query: 401 IMVKEYGIRPIHDH---YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIH 457
+ + P+ D + ++D+ ++ G + + + + ++I W ++S
Sbjct: 130 TFI----VSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSIS-SKNSISWTAMISGYAQS 184
Query: 458 GNVEIGKWAAESLLELDPY-NPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
G K A L + P N S+ L S G W L MR KG+
Sbjct: 185 GR----KLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGI 233
>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
Length = 770
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 249/660 (37%), Positives = 388/660 (58%), Gaps = 46/660 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+W LI+G+ + + +A++V+ ML+ G S T ML S+ DL
Sbjct: 139 MPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYP-SHYTLGAMLNACSASNNADL 197
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+HG+ +K+ S +G+ L MYAK G + A R F +P+KN+
Sbjct: 198 GSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNV------------ 245
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLERE-AIDLFREMRLEGLAMDQFTFGS 179
I+WTTMI+ ++ E + LF +M ++G+ ++FT S
Sbjct: 246 -------------------ITWTTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTS 286
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
V++ CG L L GKQ+ AF + + N+ V ++ + +Y + A F M +
Sbjct: 287 VMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVS 346
Query: 240 VVSWTAMLVGYGQ-----------NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL 288
+++W AM+ GY Q +A+K+F N++R+ ++PD FT S++S C+++
Sbjct: 347 IITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSM 406
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
+LE+G Q H +++ TG +S + V++ALV Y KCG IED+ + F EM++R V+WT+++
Sbjct: 407 MALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMI 466
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
SGY++ G+ E I LFE M G++P+E+T + VLSACS AGL EK HYF++M +EY I
Sbjct: 467 SGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEHYFDMMKEEYKI 526
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
PI DHY CM+D+ R GRL++A +FI + F P+ W++L++ CR HGN+E+ +AA+
Sbjct: 527 EPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAFYAAD 586
Query: 469 SLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFS 528
L+EL P +YVLL ++Y S +W V+++R+ M+++G+ SWI K +V+ F
Sbjct: 587 RLIELRPKGIETYVLLLNMYISNERWHDVARVRKLMKQEGLGVLMDRSWITIKDKVYFFK 646
Query: 529 ADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKM--LNHHSEKLAIA 586
A+D + SD++Y LE L K GY P S+ L D E +K + HHSE+LA+A
Sbjct: 647 ANDKTHELSDELYQLLENLLEKAKTIGYEPYQSAELSDSEDDKKPPAGSVRHHSERLAVA 706
Query: 587 FGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDF 646
GLL PPG +RV KN+ +C DCH++ K+ S + REI+VRD+ R H FK+G CSCGDF
Sbjct: 707 LGLLQTPPGATVRVTKNITMCRDCHSSIKFFSLLANREIVVRDSKRLHKFKDGRCSCGDF 766
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 120/456 (26%), Positives = 198/456 (43%), Gaps = 83/456 (18%)
Query: 57 CVDLG-----RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMY 111
CV+ G R +HGH++K G + +FV + LV+ Y
Sbjct: 88 CVETGSLGGARALHGHMVKTGTSADMFVATSLVNAY------------------------ 123
Query: 112 NTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLA 171
+R G +++R LF M +K+ ++WT +ITG N EA+++F EM G
Sbjct: 124 -------MRCGASQDARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRY 176
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
+T G++L AC + G Q+H + I+ +G++L MY K S++ A
Sbjct: 177 PSHYTLGAMLNACSASNNADLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRA 236
Query: 232 FRTMAWKNVVSWTAMLVGYGQN-GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS 290
FR + KNV++WT M+ ++ +E + +F +M +G+ P++FTL SV+S C
Sbjct: 237 FRMVPDKNVITWTTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLD 296
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
L G Q G + I V N+ + Y + G +++ R F EM+ ++W A++SG
Sbjct: 297 LNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISG 356
Query: 351 YAKF-----------GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
YA+ + + + +F + +KPD T +LS CS +E+G
Sbjct: 357 YAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIH 416
Query: 400 EIMVK-------------------------------EYGIRPIHDHYTCMIDILSRAGRL 428
+K E IR + +T MI S+ GR
Sbjct: 417 AQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVT-WTSMISGYSQHGRP 475
Query: 429 EEAKSFINKMPFP---PDAIGWATLLSSCRIHGNVE 461
+EA M F P+ I + +LS+C G E
Sbjct: 476 QEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAE 511
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 140/278 (50%), Gaps = 7/278 (2%)
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREA----IDLFREMRL--EG 169
+G G + R + D +W QNG EA +D+ M + EG
Sbjct: 14 SGFPAAGGADSRRPPPSSVSAADKNNWNGRSIQAAQNGSTMEAPLRPLDVGEAMAMLREG 73
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
+ + +L C +L + +H +++ ++FV ++LV+ Y +C + + A
Sbjct: 74 KTVQSAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDAR 133
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
S+F M KNVV+WTA++ GY N EA+++F M G P +TLG+++++C+
Sbjct: 134 SLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASN 193
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
+ + G+Q HG ++ +S ++ N+L Y K G++E + R F + ++ ++WT ++S
Sbjct: 194 NADLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMIS 253
Query: 350 GYAKFGKANET-IDLFEKMLSHGLKPDEVTLIGVLSAC 386
A+ E + LF ML G+ P+E TL V+S C
Sbjct: 254 ACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLC 291
>gi|28876027|gb|AAO60036.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 704
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 231/568 (40%), Positives = 355/568 (62%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
RQ+H G + F + L+ YA LG + A+ F+ +P +N++ +N + G ++
Sbjct: 127 RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKN 186
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G + +R+LF M +++ +W M+ GL G + E++ F +MR EG+ D+F GSV
Sbjct: 187 GDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVF 246
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
C GL + G+Q+HA+++R+ ++ VGS+L MY +C ++ E+V R + ++V
Sbjct: 247 RCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIV 306
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
S ++ G QNG SE A++ FC M+ G+ D T S ISSC++LA+L +G Q HG+
Sbjct: 307 SCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQV 366
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ G+ + V LV Y +CG + DS R+F D +A++S Y G + I
Sbjct: 367 MKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAI 426
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
+LF++M++ G +P +VT + +L ACS +GL E+G FE+M K YG++P HYTC++D+
Sbjct: 427 ELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDL 486
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
L R+G L+EA++ I MP PD + W TLLS+C+ N ++ + A+ ++ELDP++ ASY
Sbjct: 487 LGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASY 546
Query: 482 VLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIY 541
VLLS+I A+ +W VS++R+ MR+ VRK+PG SW++ K +H F D S P +I
Sbjct: 547 VLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEID 606
Query: 542 AELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVV 601
LE++ K+ + GY PDMS VLHD+E EK L+HHSEKLAIAF L +P G+PIRV+
Sbjct: 607 ECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVM 666
Query: 602 KNLRVCSDCHNATKYISKITQREILVRD 629
KNLRVC DCH A K +S++T REI+VRD
Sbjct: 667 KNLRVCDDCHLAIKLMSQVTGREIVVRD 694
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 170/377 (45%), Gaps = 38/377 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +WN +++G + G +++ + M ++G+ + ++ + R V
Sbjct: 199 MPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGM-HPDEFGLGSVFRCCAGLRDVVT 257
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H ++++ G + VGS L MY + G + + + LP +IV N
Sbjct: 258 GRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCN-------- 309
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
T+I G QNG A++ F MR G+A D TF S
Sbjct: 310 -----------------------TIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSA 346
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+++C L AL +G+QIH +++ V V + LV MY +C + +E VF +
Sbjct: 347 ISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDT 406
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
+AM+ YG +G ++A+++F M G EP D T +++ +C++ EEG F
Sbjct: 407 FLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFEL 466
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKAN 358
+ G+ + +V G+ G ++++ L M + D V W L+S K
Sbjct: 467 MTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSAC----KTQ 522
Query: 359 ETIDLFEKMLSHGLKPD 375
+ D+ E++ ++ D
Sbjct: 523 KNFDMAERIAKRVIELD 539
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 127/287 (44%), Gaps = 35/287 (12%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
F + AC L L +Q+HAF + + F + L+ Y + A +F +
Sbjct: 113 FSHLFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 169
Query: 237 WKNVVSWTAMLVGYGQN-------------------------------GCSEEAVKIFCN 265
+NV+SW + GY +N G EE++ F +
Sbjct: 170 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLD 229
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M+R G+ PD+F LGSV CA L + G Q H + +GL + V ++L Y +CG
Sbjct: 230 MRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGC 289
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+++ + + VS +++G + G + ++ F M S G+ D VT + +S+
Sbjct: 290 LQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISS 349
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAK 432
CS + +G+ ++K G+ + TC++ + SR G L +++
Sbjct: 350 CSDLAALAQGQQIHGQVMKA-GVDKVVPVMTCLVHMYSRCGCLGDSE 395
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 145/365 (39%), Gaps = 71/365 (19%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P VS N +I+G +G A++ + +M G+ +TF + + S +
Sbjct: 300 LPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAA-DVVTFVSAISSCSDLAALAQ 358
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIHG ++K G V V + LV MY++ G + D
Sbjct: 359 GQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGD------------------------- 393
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
S R+F G D+ + MI+ +G ++AI+LF++M G TF ++
Sbjct: 394 ------SERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLAL 447
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC EEG + + Y S+K+
Sbjct: 448 LYACSHSGLKEEGMDCFELMTKT---------------YGMQPSVKH------------- 479
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+T ++ G++GC +EA + +M + PD +++S+C + + + R
Sbjct: 480 --YTCVVDLLGRSGCLDEAEALILSMP---LTPDGVIWKTLLSACKTQKNFDMAERIAKR 534
Query: 301 SLVTGL---ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE--VSWTALVSGYAKFG 355
+ S++ +SN T + G++ + + + NVR E VSW L +F
Sbjct: 535 VIELDPHDSASYVLLSNIRATSR-RWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFC 593
Query: 356 KANET 360
+E+
Sbjct: 594 TGDES 598
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/569 (41%), Positives = 356/569 (62%), Gaps = 4/569 (0%)
Query: 83 LVDMYAKLGLIYDAKRGFDELP----EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKD 138
++ + A+ G + +AK ++ E ++ + N +I + G VE +R++F GM ++
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 139 SISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHA 198
+SW TMI +N +E EA+D+F EMR EG +FT SVL+ACG E K++H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 199 FIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEE 258
++ N++VG+AL+D+Y KC IK A VF +M K+ V+W++M+ GY QN EE
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 259 AVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVT 318
A+ ++ QR +E + FTL SVI +C+NLA+L EG Q H +G S + V+++ V
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306
Query: 319 FYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVT 378
Y KCG++ +S+ +F+E+ ++ W ++SG+AK + E + LFEKM G+ P+EVT
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366
Query: 379 LIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
+LS C GLVE+GR +F++M YG+ P HY+CM+DIL RAG L EA I +
Sbjct: 367 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 426
Query: 439 PFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVS 498
PF P A W +LL+SCR++ N+E+ + AAE L EL+P N ++VLLS+IYA+ +W+ ++
Sbjct: 427 PFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIA 486
Query: 499 QLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVP 558
+ R+ +R+ V+K G SWI K +VH FS + P +I + L+ L K K GY P
Sbjct: 487 KSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKP 546
Query: 559 DMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYIS 618
+ LHDVE+ +K ++L HSEKLA+ FGL+ +P P+R++KNLR+C DCH K S
Sbjct: 547 SVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAAS 606
Query: 619 KITQREILVRDAVRFHLFKNGECSCGDFW 647
T+R I+VRD RFH F +G CSCGDFW
Sbjct: 607 MATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 174/347 (50%), Gaps = 36/347 (10%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG-RQIH 65
VSWN +I + + ++A+ ++ M +G S T S++L + C L +++H
Sbjct: 128 VSWNTMIGLYTRNRMESEALDIFLEMRNEGF-KFSEFTISSVL-SACGVNCDALECKKLH 185
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
+K ++VG+ L+D+YAK G+I DA + F+ + +K+ V +++M+ G +
Sbjct: 186 CLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYV------ 239
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
QN EA+ L+R + L +QFT SV+ AC
Sbjct: 240 -------------------------QNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACS 274
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
L AL EGKQ+HA I ++ NVFV S+ VDMY KC S++ + +F + KN+ W
Sbjct: 275 NLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNT 334
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT- 304
++ G+ ++ +E + +F MQ++G+ P++ T S++S C + +EEG +F T
Sbjct: 335 IISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTY 394
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSG 350
GL + + +V G+ G + +++ L + S W +L++
Sbjct: 395 GLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 441
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 122/250 (48%), Gaps = 36/250 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M V+W+ +++G+ + + +A+ +Y + L ++ T S+++ S+ +
Sbjct: 223 MQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQ-NQFTLSSVICACSNLAALIE 281
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H I K GFGS VFV S VDMYAK G + ++ F E+ EKN+ ++NT+I+G +
Sbjct: 282 GKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAK 341
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ +E + LF +M+ +G+ ++ TF S+
Sbjct: 342 -------------------------------HARPKEVMILFEKMQQDGMHPNEVTFSSL 370
Query: 181 LTACGGLLALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
L+ CG +EEG++ ++R + NV S +VD+ + + A + +++ +
Sbjct: 371 LSVCGHTGLVEEGRRFFK-LMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFD 429
Query: 239 NVVS-WTAML 247
S W ++L
Sbjct: 430 PTASIWGSLL 439
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 255/647 (39%), Positives = 380/647 (58%), Gaps = 36/647 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SWN +ISG +G+ A+ V N M +G+ + IT +++L + + V
Sbjct: 182 MPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGV-KMDTITVASILPVCAQSDDVIN 240
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G IH H+LK G S VFV + L++MY+K G + DA+ FD+
Sbjct: 241 GVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQ------------------ 282
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
M+ +D +SW ++I QN A+ F+ M+L G+ D T S+
Sbjct: 283 -------------MEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSL 329
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+ L + I F+IR + D +V +G+ALV+MY K + A +VF + K+
Sbjct: 330 TSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKD 389
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQ--RNGIEPDDFTLGSVISSCANLASLEEGTQF 297
+SW ++ GY QNG + EA+ + M+ R+ I P+ T S+I + +++ +L++G +
Sbjct: 390 TISWNTLVTGYTQNGLASEAIDAYNMMEECRDTI-PNQGTWVSIIPAYSHVGALQQGMKI 448
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H + + L + V+ L+ YGKCG +ED+ LF E+ V W A+++ G+
Sbjct: 449 HAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRG 508
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
E + LF+ ML+ +K D +T + +LSACS +GLV++G+ F+IM KEYGI+P HY C
Sbjct: 509 EEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGC 568
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
M+D+L RAG LE+A + MP PDA W LLS+C+I+GN E+G A++ LLE+D N
Sbjct: 569 MVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSEN 628
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
YVLLS+IYA+ KW+ V ++R R++G+RK PG S + S+ +F + + P
Sbjct: 629 VGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKY 688
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
+IY EL+ L+ KM GYVPD S V D+E EK ++LN HSE+LAIAFG++ PP P
Sbjct: 689 TEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSP 748
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCG 644
IR+ KNLRVC DCHNATKYIS+I++REI+VRD+ RFH FK+G CSC
Sbjct: 749 IRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDGICSCA 795
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/463 (28%), Positives = 223/463 (48%), Gaps = 49/463 (10%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL--GRQIH 65
SWN +IS + G ++A+ N + G R F T + + CV L G+++H
Sbjct: 87 SWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPIL--KACVSLVDGKKVH 144
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
+ K GF VFV + LV +Y+ R G+++
Sbjct: 145 CCVFKMGFEDDVFVAASLVHLYS-------------------------------RYGVLD 173
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
+ ++F M KD SW MI+G QNG A+ + M+ EG+ MD T S+L C
Sbjct: 174 VAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCA 233
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
+ G IH ++++ +VFV +AL++MY K ++ A+ VF M +++VSW +
Sbjct: 234 QSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNS 293
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
++ Y QN A++ F MQ GI PD T+ S+ S + L+ Q RS++
Sbjct: 294 IIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSD-----QRISRSILGF 348
Query: 306 LISF------ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+I + + NALV Y K G + +H +F+++ +D +SW LV+GY + G A+E
Sbjct: 349 VIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASE 408
Query: 360 TIDLFEKMLS-HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
ID + M P++ T + ++ A S G +++G ++K + TC+
Sbjct: 409 AIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVA-TCL 467
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
ID+ + GRLE+A S ++P ++ W +++S IHG E
Sbjct: 468 IDLYGKCGRLEDAMSLFYEIP-RDTSVPWNAIIASLGIHGRGE 509
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 199/404 (49%), Gaps = 12/404 (2%)
Query: 106 KNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAID----L 161
+NIV+ +I + G + SR F + K+ SW ++I+ ++ G EA++ L
Sbjct: 52 QNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQL 111
Query: 162 FREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK 221
F L D +TF +L AC ++L +GK++H + + +D+VFV ++LV +Y +
Sbjct: 112 FSMCGGGHLRPDFYTFPPILKAC---VSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSR 168
Query: 222 CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
+ A VF M K+V SW AM+ G+ QNG + A+ + M+ G++ D T+ S+
Sbjct: 169 YGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASI 228
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE 341
+ CA + G H L GL S + VSNAL+ Y K G ++D+ +F++M VRD
Sbjct: 229 LPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDL 288
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEI 401
VSW ++++ Y + + + F+ M G++PD +T++ + S S+ R
Sbjct: 289 VSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGF 348
Query: 402 MVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+++ + ++++ ++ G + A + +++P D I W TL++ +G
Sbjct: 349 VIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLP-RKDTISWNTLVTGYTQNGLAS 407
Query: 462 IGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
A + E P +S I A + HV L++ M+
Sbjct: 408 EAIDAYNMMEECRDTIPNQGTWVSIIPA----YSHVGALQQGMK 447
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 142/281 (50%), Gaps = 12/281 (4%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
F ++ +C + + K++HA ++ N+ + + L+++Y I + S F +
Sbjct: 25 FNALFNSC---VNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIH 81
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAV----KIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
KN+ SW +++ Y + G EA+ ++F + PD +T ++ +C SL
Sbjct: 82 KKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC---VSLV 138
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
+G + H G + V+ +LV Y + G ++ +H++F +M V+D SW A++SG+
Sbjct: 139 DGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFC 198
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
+ G A + + +M G+K D +T+ +L C+++ V G + V ++G+
Sbjct: 199 QNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGV-LIHLHVLKHGLDSDV 257
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+I++ S+ GRL++A+ ++M D + W +++++
Sbjct: 258 FVSNALINMYSKFGRLQDAQMVFDQMEV-RDLVSWNSIIAA 297
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 12/189 (6%)
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN 334
D ++ +SC N+ + + + H LV G I +S L+ Y G+I S F+
Sbjct: 22 DADFNALFNSCVNVNATK---KLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFD 78
Query: 335 EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH----GLKPDEVTLIGVLSACSRAG 390
++ ++ SW +++S Y +FGK +E ++ ++ S L+PD T +L AC
Sbjct: 79 YIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC--VS 136
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATL 450
LV+ + V + G ++ + SR G L+ A MP D W +
Sbjct: 137 LVDGKK--VHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPV-KDVGSWNAM 193
Query: 451 LSSCRIHGN 459
+S +GN
Sbjct: 194 ISGFCQNGN 202
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 234/583 (40%), Positives = 361/583 (61%), Gaps = 33/583 (5%)
Query: 58 VDLGRQIHGHILKFGF-GSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMIT 116
V+ GR +H H++ F +++ + + +V+MYAK G + DA+R FDE+P K++V
Sbjct: 103 VEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMV------- 155
Query: 117 GLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
+WT +I G QN R+A+ LF +M G + FT
Sbjct: 156 ------------------------TWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFT 191
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
S+L A G L+ G Q+HAF ++ ++ +V+VGSALVDMY +C + A+ F M
Sbjct: 192 LSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMP 251
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
K+ VSW A++ G+ + G E A+ + MQR +P FT SV+S+CA++ +LE+G
Sbjct: 252 TKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKW 311
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H + +GL + N L+ Y K G+I+D+ R+F+ + D VSW +++G A+ G
Sbjct: 312 VHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGL 371
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
ET+D FE+ML G++P+E++ + VL+ACS +GL+++G +YFE+M K+Y + P HY
Sbjct: 372 GKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELM-KKYKVEPDVPHYV 430
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY 476
+D+L R G L+ A+ FI +MP P A W LL +CR+H N+E+G +AAE ELDP+
Sbjct: 431 TFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPH 490
Query: 477 NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPY 536
+ +LLS+IYAS G+W V+++R+ M+E GV+K P CSW++ ++ VH+F A+D + P
Sbjct: 491 DSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPR 550
Query: 537 SDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGL 596
+I + E+++ K+ + GYVPD S VL V+ E+ + L +HSEKLA+AF LL P G
Sbjct: 551 IKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGS 610
Query: 597 PIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNG 639
PIR+ KN+RVC DCH A K++SK+ REI+VRD RFH F++G
Sbjct: 611 PIRIKKNIRVCGDCHAAIKFVSKVVDREIIVRDTNRFHRFRDG 653
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 166/302 (54%), Gaps = 6/302 (1%)
Query: 158 AIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFV-GSALV 216
A+DL + L D + +L C L +E+G+ +HA ++ + DN V + +V
Sbjct: 74 ALDLIQR---GSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIV 130
Query: 217 DMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDF 276
+MY KC + A +F M K++V+WTA++ G+ QN +A+ +F M R G +P+ F
Sbjct: 131 NMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHF 190
Query: 277 TLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
TL S++ + + L+ GTQ H L G S + V +ALV Y +CG+++ + F+ M
Sbjct: 191 TLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGM 250
Query: 337 NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR 396
+ EVSW AL+SG+A+ G+ + L KM +P T VLSAC+ G +E+G+
Sbjct: 251 PTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGK 310
Query: 397 HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRI 456
M+K G++ I ++D+ ++AG +++AK +++ PD + W T+L+ C
Sbjct: 311 WVHAHMIKS-GLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRL-VKPDVVSWNTMLTGCAQ 368
Query: 457 HG 458
HG
Sbjct: 369 HG 370
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 203/414 (49%), Gaps = 43/414 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V+W LI+G + + DA+ ++ ML+ G + T S++L S S +D
Sbjct: 149 MPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGF-QPNHFTLSSLLKASGSEHGLDP 207
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+H LK+G+ S V+VGS LVDMYA+ G + A+ FD +P K+ V +N +I+G R
Sbjct: 208 GTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHAR 267
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+G E A+ L +M+ + FT+ SV
Sbjct: 268 KGEGE-------------------------------HALHLLWKMQRKNFQPTHFTYSSV 296
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+AC + ALE+GK +HA +I++ K F+G+ L+DMY K SI A+ VF + +V
Sbjct: 297 LSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDV 356
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW ML G Q+G +E + F M R GIEP++ + V+++C++ L+EG +
Sbjct: 357 VSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFEL 416
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKANE 359
+ + V G+ G ++ + R EM + + W AL+ G + K N
Sbjct: 417 MKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALL-GACRMHK-NM 474
Query: 360 TIDLFEKMLSHGLKPDE----VTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
+ ++ + L P + + L + ++ R V K R M+KE G++
Sbjct: 475 ELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRK----MMKESGVK 524
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 120/250 (48%), Gaps = 15/250 (6%)
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI-SFITVSNALVTFYGKCG 324
+QR + PD ++ C L +E+G H + + + + + + N +V Y KCG
Sbjct: 78 IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 325 NIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
++D+ R+F+EM +D V+WTAL++G+++ + + + LF +ML G +P+ TL +L
Sbjct: 138 CLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLK 197
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDA 444
A ++ G +K YG + + ++D+ +R G ++ A+ + MP +
Sbjct: 198 ASGSEHGLDPGTQLHAFCLK-YGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSE- 255
Query: 445 IGWATLLSSCRIHGNVEIGKWAAESLLELDPYN--PASYVLLSSIYA-------SKGKWD 495
+ W L+S H G+ A L ++ N P + S + A +GKW
Sbjct: 256 VSWNALISG---HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWV 312
Query: 496 HVSQLRRTMR 505
H ++ ++
Sbjct: 313 HAHMIKSGLK 322
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 231/524 (44%), Positives = 330/524 (62%)
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
V+ R++F M +KD +SW T+I G +NGL E + + REM L D FT SVL
Sbjct: 250 VDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPL 309
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
+ + +GK+IH IR V+V S+L+DMY KC + + VF + ++ +SW
Sbjct: 310 IAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISW 369
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
+++ G QNG +E +K F M I+P ++ S++ +CA+L +L G Q HG
Sbjct: 370 NSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITR 429
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
G I ++++LV Y KCGNI + ++F+ M +RD VSWTA++ G A G A + I+L
Sbjct: 430 NGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIEL 489
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
FE+M + G++P+ V + VL+ACS AGLV++ YF M ++GI P +HY + D+L
Sbjct: 490 FEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLG 549
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
RAGRLEEA FI MP P WATLLS+CR+H NV++ + A +LE+DP N +Y+L
Sbjct: 550 RAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYIL 609
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
L++IY++ +W ++ R ++R G+RK P CSWI+ +++V+ F A D S P ++I
Sbjct: 610 LANIYSAARRWKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREA 669
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
+E L M KEGYVPD S V HDVE +K ++ HSE+LAI FG++ P G IRV KN
Sbjct: 670 MEVLMELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGTTIRVTKN 729
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LRVC+DCH ATK+ISKI REI+VRD RFH FKNG CSCGD+W
Sbjct: 730 LRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 773
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 205/398 (51%), Gaps = 48/398 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLS--RITFSTMLIMSSSRRCV 58
MP D VSWN +I+G+A +G + + + M G NL T S++L + + +
Sbjct: 260 MPEKDLVSWNTIIAGNARNGLYGETLTMVREM---GGANLKPDSFTLSSVLPLIAENVDI 316
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G++IHG ++ G + V+V S L+DMYAK + D+ R F L E++ + +N++I G
Sbjct: 317 SKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGC 376
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
++ GL +E G+K FR+M + + ++F
Sbjct: 377 VQNGLFDE------GLK-------------------------FFRQMLMAKIKPKSYSFS 405
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
S++ AC L L GKQ+H +I RN +N+F+ S+LVDMY KC +I+ A +F M +
Sbjct: 406 SIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLR 465
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-F 297
++VSWTAM++G +G + +A+++F M+ GIEP+ +V+++C++ ++E + F
Sbjct: 466 DMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYF 525
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGK 356
+ +L G+ + A+ G+ G +E+++ M + S W L+S +
Sbjct: 526 NSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSA----CR 581
Query: 357 ANETIDLFEKMLSHGLKPDE------VTLIGVLSACSR 388
++ +D+ EK+ + L+ D + L + SA R
Sbjct: 582 VHKNVDMAEKVANRILEVDPKNTGAYILLANIYSAARR 619
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/458 (22%), Positives = 203/458 (44%), Gaps = 44/458 (9%)
Query: 3 FHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGR 62
F ++W +I + SHG + ++ + ML GL + F ++L + ++LG
Sbjct: 70 FPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV-FPSVLKACAMLMDLNLGE 128
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
+HG+I++ G ++ G+ L++MY+KL + K G L ++ T T +R
Sbjct: 129 SLHGYIIRVGLDFDLYTGNALMNMYSKLRFL--KKSGRQRLGASQVLDEMTERTRSVRTA 186
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
V + R + D ++ ++ E + +++ + R E M+
Sbjct: 187 SVLVGNQ-GRKVSDIEAFNYDV---SCRSREFEAQVLEIDYKPRSEYREME--------- 233
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
A G+QI KD S+ +F M K++VS
Sbjct: 234 ------ACNLGQQI---------KD-----------ISHSMSVDSVRKIFEMMPEKDLVS 267
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL 302
W ++ G +NG E + + M ++PD FTL SV+ A + +G + HG S+
Sbjct: 268 WNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSI 327
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
GL + + V+++L+ Y KC + DS+R+F + RD +SW ++++G + G +E +
Sbjct: 328 RQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLK 387
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL 422
F +ML +KP + ++ AC+ + G+ + + G + ++D+
Sbjct: 388 FFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRN-GFDENIFIASSLVDMY 446
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
++ G + A+ ++M D + W ++ C +HG+
Sbjct: 447 AKCGNIRTARQIFDRMRL-RDMVSWTAMIMGCALHGHA 483
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 151/346 (43%), Gaps = 32/346 (9%)
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
L+ +S RLF + +++W ++I +GL +++ F M GL D F SVL
Sbjct: 57 LLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLK 116
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY-------AESVFRTM 235
AC L+ L G+ +H +IIR +++ G+AL++MY K + +K A V M
Sbjct: 117 ACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEM 176
Query: 236 AWKNVVSWTA-MLVG-YGQNGCSEEAVKIFCNMQRNGIEPDDFTLG-SVISSCANLASLE 292
+ TA +LVG G+ EA + + E + S + +
Sbjct: 177 TERTRSVRTASVLVGNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYREMEACN 236
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
G Q +S+++ +++ ++F M +D VSW +++G A
Sbjct: 237 LGQQIKD------------ISHSM--------SVDSVRKIFEMMPEKDLVSWNTIIAGNA 276
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
+ G ET+ + +M LKPD TL VL + + KG+ +++ G+
Sbjct: 277 RNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQ-GLDAEV 335
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ +ID+ ++ R+ ++ + D I W ++++ C +G
Sbjct: 336 YVASSLIDMYAKCTRVVDSYRVFTLLT-ERDGISWNSIIAGCVQNG 380
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 319 FYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVT 378
Y + DS RLFN ++ ++W +++ Y G ++++ F ML+ GL PD
Sbjct: 51 IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110
Query: 379 LIGVLSACS 387
VL AC+
Sbjct: 111 FPSVLKACA 119
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 259/647 (40%), Positives = 376/647 (58%), Gaps = 33/647 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN +++G++ +G A+++ M ++ L S IT ++L S+ R + +
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENL-KPSFITIVSVLPAVSALRLISV 254
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G++IHG+ ++ GF S V + + LVDMYAK G +
Sbjct: 255 GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSL--------------------------- 287
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
E +R+LF GM +++ +SW +MI +QN +EA+ +F++M EG+ +
Sbjct: 288 ----ETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGA 343
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L LE G+ IH + NV V ++L+ MYCKCK + A S+F + + +
Sbjct: 344 LHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL 403
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW AM++G+ QNG +A+ F M+ ++PD FT SVI++ A L+ HG
Sbjct: 404 VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGV 463
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ + L + V+ ALV Y KCG I + +F+ M+ R +W A++ GY G
Sbjct: 464 VMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAA 523
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++LFE+M +KP+ VT + V+SACS +GLVE G F +M + Y I DHY M+D
Sbjct: 524 LELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVD 583
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAGRL EA FI +MP P + +L +C+IH NV + AAE L EL+P +
Sbjct: 584 LLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGY 643
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
+VLL++IY + W+ V Q+R +M +G+RK PGCS ++ K+ VH F + + P S +I
Sbjct: 644 HVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKI 703
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
YA LEKL + + GYVPD + VL VE K ++L+ HSEKLAI+FGLL G I V
Sbjct: 704 YAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHV 762
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC+DCHNATKYIS +T REI+VRD RFH FKNG CSCGD+W
Sbjct: 763 RKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 133/485 (27%), Positives = 237/485 (48%), Gaps = 39/485 (8%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V ++ ++ G A ++ A++ + M D + + F+ +L + + +G++IHG
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVV-YNFTYLLKVCGDEAELRVGKEIHG 159
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++K GF +F + L +MYAK R+ V E
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKC-----------------------------RQ--VNE 188
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+R++F M ++D +SW T++ G QNG+ R A+++ + M E L T SVL A
Sbjct: 189 ARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSA 248
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L + GK+IH + +R+ V + +ALVDMY KC S++ A +F M +NVVSW +M
Sbjct: 249 LRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSM 308
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ Y QN +EA+ IF M G++P D ++ + +CA+L LE G H S+ GL
Sbjct: 309 IDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGL 368
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
++V N+L++ Y KC ++ + +F ++ R VSW A++ G+A+ G+ + ++ F +
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQ 428
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M S +KPD T + V++A + + + ++++ + + T ++D+ ++ G
Sbjct: 429 MRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFV-TTALVDMYAKCG 487
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD--PYNPASYVLL 484
+ A+ + M W ++ HG GK A E E+ P L
Sbjct: 488 AIMIARLIFDMMS-ERHVTTWNAMIDGYGTHG---FGKAALELFEEMQKGTIKPNGVTFL 543
Query: 485 SSIYA 489
S I A
Sbjct: 544 SVISA 548
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 176/325 (54%), Gaps = 1/325 (0%)
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
+++ R G V+E+ R+F + K ++ + TM+ G + +A+ F MR + +
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPV 134
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
+ F +L CG L GK+IH ++++ ++F + L +MY KC+ + A VF
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFD 194
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE 293
M +++VSW ++ GY QNG + A+++ +M ++P T+ SV+ + + L +
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV 254
Query: 294 GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK 353
G + HG ++ +G S + +S ALV Y KCG++E + +LF+ M R+ VSW +++ Y +
Sbjct: 255 GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 354 FGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
E + +F+KML G+KP +V+++G L AC+ G +E+GR ++ V E G+
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSV-ELGLDRNVS 373
Query: 414 HYTCMIDILSRAGRLEEAKSFINKM 438
+I + + ++ A S K+
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKL 398
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 131/265 (49%), Gaps = 2/265 (0%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
+L+E +QI + +N F + LV ++C+ S+ A VF + K V + ML
Sbjct: 49 SLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLK 108
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
G+ + ++A++ F M+ + +EP + ++ C + A L G + HG + +G
Sbjct: 109 GFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSL 168
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
+ L Y KC + ++ ++F+ M RD VSW +V+GY++ G A +++ + M
Sbjct: 169 DLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMC 228
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
LKP +T++ VL A S L+ G+ ++ G + + T ++D+ ++ G L
Sbjct: 229 EENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRS-GFDSLVNISTALVDMYAKCGSL 287
Query: 429 EEAKSFINKMPFPPDAIGWATLLSS 453
E A+ + M + + W +++ +
Sbjct: 288 ETARQLFDGM-LERNVVSWNSMIDA 311
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/201 (18%), Positives = 90/201 (44%), Gaps = 3/201 (1%)
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
+SL+E Q GL LV+ + + G+++++ R+F ++ + V + ++
Sbjct: 48 SSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTML 107
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
G+AK ++ + F +M ++P +L C + G+ ++VK G
Sbjct: 108 KGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKS-GF 166
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
T + ++ ++ ++ EA+ ++MP D + W T+++ +G + +
Sbjct: 167 SLDLFAMTGLENMYAKCRQVNEARKVFDRMP-ERDLVSWNTIVAGYSQNGMARMALEMVK 225
Query: 469 SLLELDPYNPASYVLLSSIYA 489
S+ E + P+ ++S + A
Sbjct: 226 SMCE-ENLKPSFITIVSVLPA 245
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 248/650 (38%), Positives = 370/650 (56%), Gaps = 72/650 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MPF D VS+N I+G + + ++++++ M ++G ++ + I+++S + +DL
Sbjct: 115 MPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGF---EPTEYTIVSILNASAQLLDL 171
Query: 61 --GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G+QIHG I+ F VF+ + L DMYAK G I
Sbjct: 172 RYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEI------------------------- 206
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
E++R LF + K+ +SW MI+G +NG + I L +MRL G DQ T
Sbjct: 207 ------EQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMS 260
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
+++ A YC+C + A VF K
Sbjct: 261 TIIAA-----------------------------------YCQCGRVDEARRVFSEFKEK 285
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
++V WTAM+VGY +NG E+A+ +F M IEPD +TL SV+SSCA LASL G H
Sbjct: 286 DIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVH 345
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G+S++ GL + + VS+AL+ Y KCG I+D+ +FN M R+ VSW A++ G A+ G
Sbjct: 346 GKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDK 405
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
+ ++LFE ML KPD VT IG+LSAC +E+G+ YF+ + ++G+ P DHY CM
Sbjct: 406 DALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACM 465
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
+++L R GR+E+A + I M PD + W+TLLS C G++ + AA L ELDP
Sbjct: 466 VNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIA 525
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
Y++LS++YAS G+W V+ +R M+ K V+K G SWI+ + VH F+++D + P S+
Sbjct: 526 VPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESE 585
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGL-P 597
IY +L L K+ +EG+ P+ + VLHDV EK K + HSEKLA+AFGL+ P G+ P
Sbjct: 586 DIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISP 645
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
IR++KN+R+C+DCH K+ S+I R+I++RD+ RFH F G+CSC D W
Sbjct: 646 IRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 202/384 (52%), Gaps = 41/384 (10%)
Query: 78 FVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDK 137
F+ + L+ +YAK G + DA+ FD++ +++ +N +++ + G ++ + F M +
Sbjct: 59 FLHNQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFR 118
Query: 138 DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIH 197
DS+S+ T I G N +E+++LF+ M+ EG ++T S+L A LL L GKQIH
Sbjct: 119 DSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIH 178
Query: 198 AFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSE 257
II + NVF+ +AL DMY KC I+ A +F + KN+VSW M+ GY +NG E
Sbjct: 179 GSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPE 238
Query: 258 EAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALV 317
+ + + M+ +G PD T+ ++I++
Sbjct: 239 KCIGLLHQMRLSGHMPDQVTMSTIIAA--------------------------------- 265
Query: 318 TFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEV 377
Y +CG ++++ R+F+E +D V WTA++ GYAK G+ + + LF +ML ++PD
Sbjct: 266 --YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSY 323
Query: 378 TLIGVLSACSRAGLVEKGR--HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFI 435
TL V+S+C++ + G+ H I+ G+ + +ID+ S+ G +++A+S
Sbjct: 324 TLSSVVSSCAKLASLHHGQAVHGKSILA---GLNNNLLVSSALIDMYSKCGFIDDARSVF 380
Query: 436 NKMPFPPDAIGWATLLSSCRIHGN 459
N MP + + W ++ C +G+
Sbjct: 381 NLMP-TRNVVSWNAMIVGCAQNGH 403
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 130/412 (31%), Positives = 203/412 (49%), Gaps = 67/412 (16%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLM-LKDGLGNLSRIT------------------- 44
D SWN L+S +A GS+ + ++ M +D + + I
Sbjct: 88 DXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQ 147
Query: 45 --------FSTMLIMSSSRRCVDL--GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIY 94
++ + I+++S + +DL G+QIHG I+ F VF+ + L DMYAK G I
Sbjct: 148 REGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIE 207
Query: 95 DAKRGFDELPEKNIVMYNTMITGLLRRGL------------------------------- 123
A+ FD L +KN+V +N MI+G + G
Sbjct: 208 QARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYC 267
Query: 124 ----VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
V+E+RR+F K+KD + WT M+ G +NG E +A+ LF EM LE + D +T S
Sbjct: 268 QCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSS 327
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
V+++C L +L G+ +H I +N+ V SAL+DMY KC I A SVF M +N
Sbjct: 328 VVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRN 387
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FH 298
VVSW AM+VG QNG ++A+++F NM + +PD+ T ++S+C + +E+G + F
Sbjct: 388 VVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFD 447
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM-NVRDEVSWTALVS 349
S G+ + +V G+ G IE + L M + D + W+ L+S
Sbjct: 448 SISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLS 499
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 239/606 (39%), Positives = 370/606 (61%), Gaps = 33/606 (5%)
Query: 42 RITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFD 101
R +S ML + R + GR IH HI F + + + +++MYAK G +
Sbjct: 105 RTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSL-------- 156
Query: 102 ELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDL 161
EE++ LF M KD +SWT +I+G Q+G EA+ L
Sbjct: 157 -----------------------EEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALAL 193
Query: 162 FREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK 221
F +M G ++FT S+L A G + G+Q+HAF ++ + NV VGS+L+DMY +
Sbjct: 194 FPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYAR 253
Query: 222 CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
++ A+ +F ++A KNVVSW A++ G+ + G E +++F M R G EP FT SV
Sbjct: 254 WAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSV 313
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE 341
++ CA+ SLE+G H + +G + N L+ Y K G+I+D+ ++F + +D
Sbjct: 314 LA-CASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDI 372
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEI 401
VSW +++SGYA+ G E + LFE+ML ++P+E+T + VL+ACS +GL+++G++YFE+
Sbjct: 373 VSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFEL 432
Query: 402 MVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
M K++ I H+ ++D+L RAGRL EA FI +MP P A W LL +CR+H N++
Sbjct: 433 M-KKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMD 491
Query: 462 IGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYK 521
+G +AAE + ELDP++ +VLLS+IYAS G+ +++R+ M+E GV+K+P CSW++ +
Sbjct: 492 LGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIE 551
Query: 522 SRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSE 581
+ VH+F A+D S P ++I EK++ K+ + GYVPD S VL + ++ L +HSE
Sbjct: 552 NEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSE 611
Query: 582 KLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGEC 641
KLA+AF +L PPGL IR+ KN+R+C DCH+A K+ S++ REI+VRD RFH F +G C
Sbjct: 612 KLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMC 671
Query: 642 SCGDFW 647
SC D+W
Sbjct: 672 SCRDYW 677
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 183/349 (52%), Gaps = 34/349 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSW +LISG++ G ++A+ ++ ML G + T S++L S +
Sbjct: 166 MPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGF-QPNEFTLSSLLKASGTGPSDHH 224
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H LK+G+ V VGS L+DMYA+ + +AK F+ L KN+V +N +I G R
Sbjct: 225 GRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHAR 284
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+G E R LF +M +G FT+ SV
Sbjct: 285 KGEGEHVMR-------------------------------LFXQMLRQGFEPTHFTYSSV 313
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC +LE+GK +HA +I++ + ++G+ L+DMY K SIK A+ VFR + +++
Sbjct: 314 L-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDI 372
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW +++ GY Q+G EA+++F M + ++P++ T SV+++C++ L+EG +
Sbjct: 373 VSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFEL 432
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALV 348
+ + + +V G+ G + ++++ EM ++ + W AL+
Sbjct: 433 MKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALL 481
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 163/289 (56%), Gaps = 3/289 (1%)
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
L ++ + +L C L L++G+ IHA I + +D++ + + +++MY KC S++ A+
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
+F M K++VSWT ++ GY Q+G + EA+ +F M G +P++FTL S++ +
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
S G Q H SL G + V ++L+ Y + ++ ++ +FN + ++ VSW AL++
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
G+A+ G+ + LF +ML G +P T VL AC+ +G +E+G+ + V + G +
Sbjct: 281 GHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGK-WVHAHVIKSGGQ 338
Query: 410 PIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
PI +ID+ +++G +++AK ++ D + W +++S HG
Sbjct: 339 PIAYIGNTLIDMYAKSGSIKDAKKVFRRL-VKQDIVSWNSIISGYAQHG 386
>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
Length = 719
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 258/682 (37%), Positives = 385/682 (56%), Gaps = 97/682 (14%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P ++W+ LISG+ +G +A++++ M +G ++ T+ ++L + S ++ G
Sbjct: 99 PIRSCITWSSLISGYCRYGCDVEALELFWEMQYEG-ERPNQFTWGSVLRVCSMYVLLEKG 157
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+QIH H +K F S FV + LVDMYAK I +A+ F+ P+K
Sbjct: 158 KQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDK--------------- 202
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
++ + WT M+TG QNG +AI+ FR+MR EG+ +QFTF S+L
Sbjct: 203 ---------------RNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSIL 247
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
TACG + A G Q+H I+R+ NVFVGSALVDMY KC + A + TM + V
Sbjct: 248 TACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPV 307
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW +M+VG + G EEA+ +F M ++ D+FT S+
Sbjct: 308 SWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSL-------------------- 347
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
V+NALV Y K G + + +F +M +D +SWT+LV+G G E +
Sbjct: 348 ----------VNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEAL 397
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSAC--------SRAGLVE-------------------- 393
LF +M G+ PD++ + VLSA ++ G +E
Sbjct: 398 RLFCEMRIMGIHPDQIVIAAVLSALDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTAL 457
Query: 394 --------KGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
+GR YF+ M + YGI+P +HY CMID+L R+G+L EAK +N+M PDA
Sbjct: 458 IVGYAQNGRGRDYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDAT 517
Query: 446 GWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
W LL++CR+HGNVE+G+ AA +L EL+P N YVLLS++Y++ GKW+ ++ RR M+
Sbjct: 518 VWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMK 577
Query: 506 EKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLH 565
+GV K+PGCSWI+ S+VH F ++D S P + +IY++++++ + + GYVPDM+ LH
Sbjct: 578 LRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALH 637
Query: 566 DVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREI 625
D++ K L +HSEKLA+AFGLL +PPG PIR+ KNLR+C DCH A KY+S + R +
Sbjct: 638 DMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHV 697
Query: 626 LVRDAVRFHLFKNGECSCGDFW 647
++RD+ FH F+ G CSC D+W
Sbjct: 698 ILRDSNCFHHFREGACSCSDYW 719
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 125/375 (33%), Positives = 200/375 (53%), Gaps = 33/375 (8%)
Query: 88 AKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMIT 147
+K G + DA++ FD +P+++ +NTMI G + E+R+LF + I+W+++I+
Sbjct: 52 SKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLIS 111
Query: 148 GLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKD 207
G + G + EA++LF EM+ EG +QFT+GSVL C + LE+GKQIHA I+
Sbjct: 112 GYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDS 171
Query: 208 NVFVGSALVDMYCKCKSIKYAESVFRTMAWK-NVVSWTAMLVGYGQNGCSEEAVKIFCNM 266
N FV + LVDMY KCK I AE +F K N V WTAM+ GY QNG +A++ F +M
Sbjct: 172 NAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDM 231
Query: 267 QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
+ GIE + FT S++++C ++++ G Q HG + +G + + V +ALV Y KCG++
Sbjct: 232 RGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDL 291
Query: 327 EDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSAC 386
++ R+ M V D VSW +++ G + G E + LF M +K DE T +++
Sbjct: 292 SNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSLVN-- 349
Query: 387 SRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIG 446
++D+ ++ G + A KM D I
Sbjct: 350 -----------------------------NALVDMYAKRGYFDYAFDVFEKMT-DKDVIS 379
Query: 447 WATLLSSCRIHGNVE 461
W +L++ C +G+ E
Sbjct: 380 WTSLVTGCVHNGSYE 394
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 42/199 (21%)
Query: 298 HGRSLVT--GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE-------------- 341
H R V G + + SN +++ KCG ++D+ +LF+ M RDE
Sbjct: 27 HIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSG 86
Query: 342 -----------------VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
++W++L+SGY ++G E ++LF +M G +P++ T VL
Sbjct: 87 RLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLR 146
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDH----YTCMIDILSRAGRLEEAKSFINKMPF 440
CS L+EKG+ + + I+ D T ++D+ ++ + EA+ P
Sbjct: 147 VCSMYVLLEKGKQ-----IHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPD 201
Query: 441 PPDAIGWATLLSSCRIHGN 459
+ + W +++ +G+
Sbjct: 202 KRNHVLWTAMVTGYSQNGD 220
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 252/643 (39%), Positives = 381/643 (59%), Gaps = 39/643 (6%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFST-MLIMSSSRRCVDL--GRQI 64
+WN +I ++ G++ +A+ +Y+ M +G+ R ST +++ + R +DL G +
Sbjct: 72 AWNAMIIAYSRRGAMFEALSLYHRMASEGV----RPDSSTYTVVLKACTRSLDLRSGEET 127
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
+ G+G VFVG+ ++++YAK G + +A R FD+
Sbjct: 128 WRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDK---------------------- 165
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
M +D + WTTMITGL QNG REA+D++R+M + + D ++ AC
Sbjct: 166 ---------MGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQAC 216
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L + G IH ++IR D +V V ++LVDMY K ++ A VFR M +KNV+SW+
Sbjct: 217 TTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWS 276
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
A++ G+ QNG + A+++ +MQ G +PD +L SV+ +C+ + L+ G HG +V
Sbjct: 277 ALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGY-IVR 335
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
L S A++ Y KCG++ + +F++++ RD +SW A+++ Y G E + LF
Sbjct: 336 RLHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLF 395
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+M +KPD T +LSA S +GLVEKGR++F IMV EY I+P HY CM+D+LSR
Sbjct: 396 LQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSR 455
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AGR+EEA+ I M P W LLS C HG IG+ AA+ +LEL+P +P Y L+
Sbjct: 456 AGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLELNPDDPGIYSLV 515
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S+ +A+ +WD V+++R+ M++ G++K PG S ++ ++H F +D S ++I L
Sbjct: 516 SNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKLHAFLMEDKSHHQYEEIMQVL 575
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
KL+ +M GYVP VLH++E K +ML +HSE+LAIAFGLL PG + + KNL
Sbjct: 576 GKLDYEMKAMGYVPKTEFVLHNLEEEVKERMLCNHSERLAIAFGLLNTGPGTRLLITKNL 635
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RVC DCH ATK+ISKI REI+VRD RFH FK+G CSCGD+W
Sbjct: 636 RVCGDCHEATKFISKIVNREIVVRDVKRFHHFKDGVCSCGDYW 678
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 199/386 (51%), Gaps = 16/386 (4%)
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
+I R G +E +R++F +W MI + G EA+ L+ M EG+ D
Sbjct: 45 LIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPD 104
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
T+ VL AC L L G++ + + D+VFVG+A++++Y KC + A VF
Sbjct: 105 SSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFD 164
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE 293
M +++V WT M+ G QNG + EAV I+ M + +E D + +I +C L +
Sbjct: 165 KMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKM 224
Query: 294 GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK 353
G HG + +I + V +LV Y K G++E + +F M ++ +SW+AL+SG+A+
Sbjct: 225 GLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQ 284
Query: 354 FGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH- 412
G A + L M S G KPD V+L+ VL ACS+ G ++ G+ V Y +R +H
Sbjct: 285 NGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKS-----VHGYIVRRLHF 339
Query: 413 --DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL 470
T +ID+ S+ G L A++ +++ F D+I W +++S IHG+ G+ A
Sbjct: 340 DCVSSTAVIDMYSKCGSLSFARTVFDQISF-RDSISWNAIIASYGIHGS---GEEALSLF 395
Query: 471 LELDPYNP----ASYVLLSSIYASKG 492
L++ N A++ L S ++ G
Sbjct: 396 LQMRETNVKPDHATFASLLSAFSHSG 421
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 173/368 (47%), Gaps = 55/368 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLK-----DGLGNLSRITFSTMLIMSSSR 55
M D V W +I+G A +G +AV +Y M K DG+ L I T L S
Sbjct: 166 MGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSK-- 223
Query: 56 RCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
+G IHG++++ V V + LVDMYAK G + A F + KN++ ++ +
Sbjct: 224 ----MGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSAL- 278
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
I+G QNG A+ L +M+ G D
Sbjct: 279 ------------------------------ISGFAQNGFAGNALQLVVDMQSFGYKPDSV 308
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
+ SVL AC + L+ GK +H +I+R H D V +A++DMY KC S+ +A +VF +
Sbjct: 309 SLVSVLLACSQVGFLKLGKSVHGYIVRRLHFDCV-SSTAVIDMYSKCGSLSFARTVFDQI 367
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
++++ +SW A++ YG +G EEA+ +F M+ ++PD T S++S+ ++ +E+
Sbjct: 368 SFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEK-- 425
Query: 296 QFHGRSLVTGLISFITVSNA------LVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALV 348
GR + +++ + + +V + G +E++ L M ++ W AL+
Sbjct: 426 ---GRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALL 482
Query: 349 SGYAKFGK 356
SG GK
Sbjct: 483 SGCLNHGK 490
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 84/168 (50%), Gaps = 8/168 (4%)
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
+ H ++TG+ + L+ Y + G+IE + ++F++ +W A++ Y++
Sbjct: 24 AKIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRR 83
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE-YGIRPIHD 413
G E + L+ +M S G++PD T VL AC+R+ + G + V + YG D
Sbjct: 84 GAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYG----DD 139
Query: 414 HY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+ ++++ ++ G+++EA +KM D + W T+++ +G
Sbjct: 140 VFVGAAVLNLYAKCGKMDEAMRVFDKMG-RRDLVCWTTMITGLAQNGQ 186
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/602 (40%), Positives = 371/602 (61%), Gaps = 36/602 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNL--SRITFSTMLIMSSSRRCVDLGRQI 64
V WNL++ + G +ND K + L + + ++ T+ +L + R +DLG QI
Sbjct: 311 VLWNLML---VAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQI 367
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +K GF S ++V L+DMY+K G +
Sbjct: 368 HSLSVKTGFESDMYVSGVLIDMYSKYGWL------------------------------- 396
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
E++RR+ +K+KD +SWT+MI G +Q+ ++A+ F+EM+ G+ D S ++ C
Sbjct: 397 EKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGC 456
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G+ A+ +G QIHA I + + +V + +ALV++Y +C I+ A S F + K+ ++W
Sbjct: 457 AGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWN 516
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++ G+ Q+G EEA+K+F M ++G++ + FT S +S+ ANLA +++G Q H R + T
Sbjct: 517 GLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKT 576
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G V NAL++ YGKCG+ ED+ F+EM+ R+EVSW +++ ++ G+ E +DLF
Sbjct: 577 GHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLF 636
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
++M G+KP++VT IGVL+ACS GLVE+G YF+ M EYGIRP DHY C+IDI R
Sbjct: 637 DQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGR 696
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG+L+ AK FI +MP DA+ W TLLS+C++H N+E+G++AA+ LLEL+P++ ASYVLL
Sbjct: 697 AGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLL 756
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S+ YA KW + Q+R+ MR++GVRK+PG SWI+ K+ VH F D P ++QIY L
Sbjct: 757 SNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFL 816
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
+N ++ K GY + + HD E + HSEKLA+ FGL+ +PP +P+RV+KNL
Sbjct: 817 AVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNL 876
Query: 605 RV 606
RV
Sbjct: 877 RV 878
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 137/459 (29%), Positives = 236/459 (51%), Gaps = 36/459 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V++N LISGHA G A++++ M GL + +T S++L +S +
Sbjct: 204 MPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGL-SPDCVTISSLLAACASLGDLQK 262
Query: 61 GRQIHGHILKFGFGS-YVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G Q+H ++ K G S Y+ GS L+D+Y K G + A F+ N+V++N M+
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGS-LLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAF- 320
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
G + + + F +LF +M+ G+ +QFT+
Sbjct: 321 --GQINDLAKSF----------------------------ELFCQMQAAGIRPNQFTYPC 350
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L C ++ G+QIH+ ++ + +++V L+DMY K ++ A V + K+
Sbjct: 351 ILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKD 410
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VVSWT+M+ GY Q+ C ++A+ F MQ+ GI PD+ L S IS CA + ++ +G Q H
Sbjct: 411 VVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHA 470
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
R V+G +++ NALV Y +CG I ++ F E+ +DE++W LVSG+A+ G E
Sbjct: 471 RIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEE 530
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ +F +M G+K + T + LSA + +++G+ ++K G + +I
Sbjct: 531 ALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKT-GHSFETEVGNALI 589
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ + G E+AK ++M + + W T+++SC HG
Sbjct: 590 SLYGKCGSFEDAKMEFSEMS-ERNEVSWNTIITSCSQHG 627
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 128/453 (28%), Positives = 220/453 (48%), Gaps = 44/453 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW ++SG+A +G +A+ +Y M + G+ + S++L + GR I
Sbjct: 107 DNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYV-LSSVLSSCTKAELFAQGRLI 165
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H K GF S +FVG+ ++ +Y LR G
Sbjct: 166 HAQGYKHGFCSEIFVGNAVITLY-------------------------------LRCGSF 194
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ R+F M +D++++ T+I+G Q G A+++F EM+ GL+ D T S+L AC
Sbjct: 195 RLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAAC 254
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L L++G Q+H+++ + + + +L+D+Y KC ++ A +F + NVV W
Sbjct: 255 ASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWN 314
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
MLV +GQ ++ ++FC MQ GI P+ FT ++ +C ++ G Q H S+ T
Sbjct: 315 LMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKT 374
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G S + VS L+ Y K G +E + R+ + +D VSWT++++GY + + + F
Sbjct: 375 GFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAF 434
Query: 365 EKMLSHGLKPDEVTLIGVLSACS-----RAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
++M G+ PD + L +S C+ R GL R Y + I + ++
Sbjct: 435 KEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSI------WNALV 488
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
++ +R GR+ EA S ++ D I W L+S
Sbjct: 489 NLYARCGRIREAFSSFEEIEH-KDEITWNGLVS 520
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 128/462 (27%), Positives = 226/462 (48%), Gaps = 53/462 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGL--GNLSRITFSTMLIMSSSRRCV 58
M S ++G +H D KV +L G L + F+ L R C
Sbjct: 1 MTRRGAASLGRTLAGFLAH---EDPAKVLSLFADKARQHGGLGPLDFACAL-----RACR 52
Query: 59 DLGR------QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYN 112
GR +IH + G G Y VG+ L+D+Y+K GL+ LP
Sbjct: 53 GNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLV---------LP-------- 95
Query: 113 TMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM 172
+RR+F + +D++SW M++G QNGL EA+ L+R+M G+
Sbjct: 96 --------------ARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVP 141
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
+ SVL++C +G+ IHA ++ +FVG+A++ +Y +C S + AE VF
Sbjct: 142 TPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVF 201
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
M ++ V++ ++ G+ Q G E A++IF MQ +G+ PD T+ S++++CA+L L+
Sbjct: 202 CDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQ 261
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
+GTQ H G+ S + +L+ Y KCG++E + +FN + + V W ++ +
Sbjct: 262 KGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFG 321
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
+ ++ +LF +M + G++P++ T +L C+ ++ G + VK G
Sbjct: 322 QINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKT-GFES-- 378
Query: 413 DHYT--CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
D Y +ID+ S+ G LE+A+ + +M D + W ++++
Sbjct: 379 DMYVSGVLIDMYSKYGWLEKARRVL-EMLKEKDVVSWTSMIA 419
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/648 (37%), Positives = 372/648 (57%), Gaps = 33/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D V++N LI+G+ G +++ ++ M + G S TFS +L L
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSG-HQPSDFTFSGVLKAVVGLHDFAL 268
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H + GF VG+ ++D Y+K
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSK------------------------------- 297
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
V E+R LF M + D +S+ +I+ Q ++ FREM+ G F F ++
Sbjct: 298 HDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATM 357
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+ L +L+ G+Q+H + + VG++LVDMY KC+ + AE +F+++ +
Sbjct: 358 LSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTT 417
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWTA++ GY Q G +K+F M+ + + D T +V+ + A+ ASL G Q H
Sbjct: 418 VSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAF 477
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ +G + + + LV Y KCG+I+D+ ++F EM R+ VSW AL+S +A G
Sbjct: 478 IIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAA 537
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
I F KM+ GL+PD V+++GVL+ACS G VE+G YF+ M YGI P HY CM+D
Sbjct: 538 IGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLD 597
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY-NPA 479
+L R GR EA+ +++MPF PD I W+++L++CRIH N + + AAE L ++ + A
Sbjct: 598 LLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAA 657
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+YV +S+IYA+ G+W+ V +++ MRE+G++K P SW++ ++H+FS++D + P D+
Sbjct: 658 AYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDE 717
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
I ++ +L ++ +EGY PD SSV+ DV+ KI+ L +HSE+LA+AF L+ P G PI
Sbjct: 718 IVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIV 777
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V+KNLR C DCH A K ISKI +REI VRD RFH F G CSCGD+W
Sbjct: 778 VMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 133/481 (27%), Positives = 228/481 (47%), Gaps = 40/481 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNL-SRITFSTMLIMSSSRRCVD 59
MP V+W +L+ +A + ++A K++ M + L +TF+T+L + +
Sbjct: 105 MPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQN 164
Query: 60 LGRQIHGHILKFGFGSYVF--VGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
Q+H +K GF + F V + L+ Y ++ + A F+E+PEK
Sbjct: 165 AVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEK----------- 213
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
DS+++ T+ITG ++GL E+I LF +MR G FTF
Sbjct: 214 --------------------DSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTF 253
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
VL A GL G+Q+HA + + VG+ ++D Y K + +F M
Sbjct: 254 SGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPE 313
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
+ VS+ ++ Y Q E ++ F MQ G + +F +++S ANL+SL+ G Q
Sbjct: 314 LDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQL 373
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H ++L+ S + V N+LV Y KC E++ +F + R VSWTAL+SGY + G
Sbjct: 374 HCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLH 433
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
+ LF KM L+ D+ T VL A + + G+ +++ + + +
Sbjct: 434 GAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSG-SG 492
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE--IGKWAA--ESLLEL 473
++D+ ++ G +++A +MP +A+ W L+S+ +G+ E IG +A ES L+
Sbjct: 493 LVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQP 551
Query: 474 D 474
D
Sbjct: 552 D 552
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 193/397 (48%), Gaps = 10/397 (2%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
R++ I+K GF + + +V+ + G + A++ +DE+P KN V NTMI+G ++
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAM-DQFTFGS 179
G V +R LF M D+ ++WT ++ +N EA LFR+M R + D TF +
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVF--VGSALVDMYCKCKSIKYAESVFRTMAW 237
+L C + Q+HAF ++ N F V + L+ YC+ + + A +F +
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
K+ V++ ++ GY ++G E++ +F M+++G +P DFT V+ + L G Q
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL 272
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H S+ TG +V N ++ FY K + ++ LF+EM D VS+ ++S Y++ +
Sbjct: 273 HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQY 332
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR--HYFEIMVKEYGIRPIHDHY 415
++ F +M G +LS + ++ GR H ++ I + +
Sbjct: 333 EASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGN-- 390
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
++D+ ++ EEA+ +P + W L+S
Sbjct: 391 -SLVDMYAKCEMFEEAELIFKSLP-QRTTVSWTALIS 425
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 248/650 (38%), Positives = 369/650 (56%), Gaps = 72/650 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MPF D VS+N I+G + + ++++++ M ++G ++ + I+++S + DL
Sbjct: 115 MPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGF---EPTEYTIVSILNASAQLSDL 171
Query: 61 --GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G+QIHG I+ F VF+ + L DMYAK G I
Sbjct: 172 RYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEI------------------------- 206
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
E++R LF + K+ +SW MI+G +NG + I L +MRL G DQ T
Sbjct: 207 ------EQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMS 260
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
+++ A YC+C + A VF K
Sbjct: 261 TIIAA-----------------------------------YCQCGRVDEARRVFSEFKEK 285
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
++V WTAM+VGY +NG E+A+ +F M IEPD +TL SV+SSCA LASL G H
Sbjct: 286 DIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVH 345
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G+S++ GL + + VS+AL+ Y KCG I+D+ +FN M R+ VSW A++ G A+ G
Sbjct: 346 GKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDK 405
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
+ ++LFE ML KPD VT IG+LSAC +E+G+ YF+ + ++G+ P DHY CM
Sbjct: 406 DALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACM 465
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
+++L R GR+E+A + I M PD + W+TLLS C G++ + AA L ELDP
Sbjct: 466 VNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIA 525
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
Y++LS++YAS G+W V+ +R M+ K V+K G SWI+ + VH F+++D + P S+
Sbjct: 526 VPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESE 585
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGL-P 597
IY +L L K+ +EG+ P+ + VLHDV EK K + HSEKLA+AFGL+ P G+ P
Sbjct: 586 DIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISP 645
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
IR++KN+R+C+DCH K+ S+I R+I++RD+ RFH F G+CSC D W
Sbjct: 646 IRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 202/384 (52%), Gaps = 41/384 (10%)
Query: 78 FVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDK 137
F+ + L+ +YAK G + DA+ FD++ +++I +N +++ + G ++ + F M +
Sbjct: 59 FLHNQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFR 118
Query: 138 DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIH 197
DS+S+ T I G N +E+++LF+ M+ EG ++T S+L A L L GKQIH
Sbjct: 119 DSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIH 178
Query: 198 AFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSE 257
II + NVF+ +AL DMY KC I+ A +F + KN+VSW M+ GY +NG E
Sbjct: 179 GSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPE 238
Query: 258 EAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALV 317
+ + + M+ +G PD T+ ++I++
Sbjct: 239 KCIGLLHQMRLSGHMPDQVTMSTIIAA--------------------------------- 265
Query: 318 TFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEV 377
Y +CG ++++ R+F+E +D V WTA++ GYAK G+ + + LF +ML ++PD
Sbjct: 266 --YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSY 323
Query: 378 TLIGVLSACSRAGLVEKGR--HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFI 435
TL V+S+C++ + G+ H I+ G+ + +ID+ S+ G +++A+S
Sbjct: 324 TLSSVVSSCAKLASLHHGQAVHGKSILA---GLNNNLLVSSALIDMYSKCGFIDDARSVF 380
Query: 436 NKMPFPPDAIGWATLLSSCRIHGN 459
N MP + + W ++ C +G+
Sbjct: 381 NLMP-TRNVVSWNAMIVGCAQNGH 403
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 129/412 (31%), Positives = 202/412 (49%), Gaps = 67/412 (16%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLM-LKDGLGNLSRIT------------------- 44
D SWN L+S +A GS+ + ++ M +D + + I
Sbjct: 88 DIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQ 147
Query: 45 --------FSTMLIMSSSRRCVDL--GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIY 94
++ + I+++S + DL G+QIHG I+ F VF+ + L DMYAK G I
Sbjct: 148 REGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIE 207
Query: 95 DAKRGFDELPEKNIVMYNTMITGLLRRGL------------------------------- 123
A+ FD L +KN+V +N MI+G + G
Sbjct: 208 QARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYC 267
Query: 124 ----VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
V+E+RR+F K+KD + WT M+ G +NG E +A+ LF EM LE + D +T S
Sbjct: 268 QCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSS 327
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
V+++C L +L G+ +H I +N+ V SAL+DMY KC I A SVF M +N
Sbjct: 328 VVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRN 387
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FH 298
VVSW AM+VG QNG ++A+++F NM + +PD+ T ++S+C + +E+G + F
Sbjct: 388 VVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFD 447
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM-NVRDEVSWTALVS 349
+ G+ + +V G+ G IE + L M + D + W+ L+S
Sbjct: 448 SITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLS 499
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 246/611 (40%), Positives = 377/611 (61%), Gaps = 12/611 (1%)
Query: 39 NLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKR 98
N+ ++ +L ++R G+++H H++K + VF+ + L+ +Y K + DA
Sbjct: 240 NMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHN 299
Query: 99 GFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREA 158
FDE+PE+N+V + MI+ +RG ++ LF K S++ I L + R
Sbjct: 300 VFDEMPERNVVSWTAMISAYSQRGYASQALNLFFA-DVKISLTGVYAIDKLKLSNPNRPW 358
Query: 159 IDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDM 218
+ ++FTF +VLT+C L G+QIH+ II+ +++D+VFVGS+L+DM
Sbjct: 359 V---------CTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDM 409
Query: 219 YCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
Y K I A +VF + ++VVS TA++ GY Q G EEA+++F +Q G++ + T
Sbjct: 410 YAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTY 469
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
V+++ + LA+L+ G Q H L + + SF+ + N+L+ Y KCGN+ S R+F+ M
Sbjct: 470 TGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYE 529
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRH 397
R +SW A++ GY+K G+ E + LF M +KPD VT++ VLS CS GL +KG +
Sbjct: 530 RTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLN 589
Query: 398 YFEIMVK-EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRI 456
F M + + P +HY C++D+L R+GR+EEA FI KMPF P A W +LL +CR+
Sbjct: 590 IFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRV 649
Query: 457 HGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCS 516
H NV+IG++A + LLE++P N +YV+LS++YAS G+W+ VS LR M +K V K+PG S
Sbjct: 650 HSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRS 709
Query: 517 WIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKML 576
I+ +H F A D S P ++I ++++L+ + GYVPD+S VLHDV+ +K K+L
Sbjct: 710 SIELDQVLHTFHASDRSHPRREEICMKVKELSTSFKEVGYVPDLSCVLHDVDEEQKEKIL 769
Query: 577 NHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLF 636
HSEKLA++FGL+ P +PIRV+KNLR+C DCHN KYISK+ RE+ +RD RFH
Sbjct: 770 LGHSEKLALSFGLIASPASVPIRVIKNLRICVDCHNFAKYISKVYGREVSLRDKNRFHRI 829
Query: 637 KNGECSCGDFW 647
G+CSC D+W
Sbjct: 830 VGGKCSCEDYW 840
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 182/360 (50%), Gaps = 56/360 (15%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRI----------------- 43
MP + VSW +IS ++ G + A+ ++ +K L + I
Sbjct: 304 MPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEP 363
Query: 44 ---TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF 100
TF+T+L +S LGRQIH I+K + +VFVGS L+DMYAK G I+
Sbjct: 364 NEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIH------ 417
Query: 101 DELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAID 160
E+R +F + ++D +S T +I+G Q GL+ EA++
Sbjct: 418 -------------------------EARTVFECLPERDVVSCTAIISGYAQLGLDEEALE 452
Query: 161 LFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYC 220
LFR ++ EG+ + T+ VLTA GL AL+ GKQ+H ++R++ V + ++L+DMY
Sbjct: 453 LFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYS 512
Query: 221 KCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLG 279
KC ++ Y+ +F TM + V+SW AMLVGY ++G E +K+F M + ++PD T+
Sbjct: 513 KCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTIL 572
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGLISF---ITVSNALVTFYGKCGNIEDSHRLFNEM 336
+V+S C++ ++G + +G I + +V G+ G +E++ +M
Sbjct: 573 AVLSGCSHGGLEDKGLNIFN-DMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKM 631
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 154/316 (48%), Gaps = 23/316 (7%)
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
+M L G M + ++L C A EG+++HA +I+ + +VF+ + L+ +Y KC
Sbjct: 233 QMALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 292
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIF-------------------C 264
S+ A +VF M +NVVSWTAM+ Y Q G + +A+ +F
Sbjct: 293 SLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLS 352
Query: 265 NMQRNGI--EPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGK 322
N R + EP++FT +V++SC + G Q H + + V ++L+ Y K
Sbjct: 353 NPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAK 412
Query: 323 CGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGV 382
G I ++ +F + RD VS TA++SGYA+ G E ++LF ++ G+K + VT GV
Sbjct: 413 DGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGV 472
Query: 383 LSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPP 442
L+A S ++ G+ +++ I +ID+ S+ G L ++ + M +
Sbjct: 473 LTALSGLAALDLGKQVHNHVLRS-EIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTM-YER 530
Query: 443 DAIGWATLLSSCRIHG 458
I W +L HG
Sbjct: 531 TVISWNAMLVGYSKHG 546
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/602 (40%), Positives = 371/602 (61%), Gaps = 36/602 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNL--SRITFSTMLIMSSSRRCVDLGRQI 64
V WNL++ + G +ND K + L + + ++ T+ +L + R +DLG QI
Sbjct: 311 VLWNLML---VAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQI 367
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +K GF S ++V L+DMY+K G +
Sbjct: 368 HSLSVKTGFESDMYVSGVLIDMYSKYGWL------------------------------- 396
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
E++RR+ +K+KD +SWT+MI G +Q+ ++A+ F+EM+ G+ D S ++ C
Sbjct: 397 EKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGC 456
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G+ A+ +G QIHA I + + +V + +ALV++Y +C I+ A S F + K+ ++W
Sbjct: 457 AGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWN 516
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++ G+ Q+G EEA+K+F M ++G++ + FT S +S+ ANLA +++G Q H R + T
Sbjct: 517 GLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKT 576
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G V NAL++ YGKCG+ ED+ F+EM+ R+EVSW +++ ++ G+ E +DLF
Sbjct: 577 GHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLF 636
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
++M G+KP++VT IGVL+ACS GLVE+G YF+ M EYGIRP DHY C+IDI R
Sbjct: 637 DQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGR 696
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG+L+ AK FI +MP DA+ W TLLS+C++H N+E+G++AA+ LLEL+P++ ASYVLL
Sbjct: 697 AGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLL 756
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S+ YA KW + Q+R+ MR++GVRK+PG SWI+ K+ VH F D P ++QIY L
Sbjct: 757 SNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFL 816
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
+N ++ K GY + + HD E + HSEKLA+ FGL+ +PP +P+RV+KNL
Sbjct: 817 AVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNL 876
Query: 605 RV 606
RV
Sbjct: 877 RV 878
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/459 (29%), Positives = 236/459 (51%), Gaps = 36/459 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V++N LISGHA G A++++ M GL + +T S++L +S +
Sbjct: 204 MPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGL-SPDCVTISSLLAACASLGDLQK 262
Query: 61 GRQIHGHILKFGFGS-YVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G Q+H ++ K G S Y+ GS L+D+Y K G + A F+ N+V++N M+
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGS-LLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAF- 320
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
G + + + F +LF +M+ G+ +QFT+
Sbjct: 321 --GQINDLAKSF----------------------------ELFCQMQAAGIRPNQFTYPC 350
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L C ++ G+QIH+ ++ + +++V L+DMY K ++ A V + K+
Sbjct: 351 ILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKD 410
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VVSWT+M+ GY Q+ C ++A+ F MQ+ GI PD+ L S IS CA + ++ +G Q H
Sbjct: 411 VVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHA 470
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
R V+G +++ NALV Y +CG I ++ F E+ +DE++W LVSG+A+ G E
Sbjct: 471 RIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEE 530
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ +F +M G+K + T + LSA + +++G+ ++K G + +I
Sbjct: 531 ALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKT-GHSFETEVGNALI 589
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ + G E+AK ++M + + W T+++SC HG
Sbjct: 590 SLYGKCGSFEDAKMEFSEMS-ERNEVSWNTIITSCSQHG 627
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 128/453 (28%), Positives = 220/453 (48%), Gaps = 44/453 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW ++SG+A +G +A+ +Y M + G+ + S++L + GR I
Sbjct: 107 DNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYV-LSSVLSSCTKAELFAQGRLI 165
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H K GF S +FVG+ ++ +Y LR G
Sbjct: 166 HAQGYKHGFCSEIFVGNAVITLY-------------------------------LRCGSF 194
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ R+F M +D++++ T+I+G Q G A+++F EM+ GL+ D T S+L AC
Sbjct: 195 RLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAAC 254
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L L++G Q+H+++ + + + +L+D+Y KC ++ A +F + NVV W
Sbjct: 255 ASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWN 314
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
MLV +GQ ++ ++FC MQ GI P+ FT ++ +C ++ G Q H S+ T
Sbjct: 315 LMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKT 374
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G S + VS L+ Y K G +E + R+ + +D VSWT++++GY + + + F
Sbjct: 375 GFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAF 434
Query: 365 EKMLSHGLKPDEVTLIGVLSACS-----RAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
++M G+ PD + L +S C+ R GL R Y + I + ++
Sbjct: 435 KEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSI------WNALV 488
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
++ +R GR+ EA S ++ D I W L+S
Sbjct: 489 NLYARCGRIREAFSSFEEIEH-KDEITWNGLVS 520
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 128/462 (27%), Positives = 226/462 (48%), Gaps = 53/462 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGL--GNLSRITFSTMLIMSSSRRCV 58
M S ++G +H D KV +L G L + F+ L R C
Sbjct: 1 MTRRGAASLGRTLAGFLAH---EDPAKVLSLFADKARQHGGLGPLDFACAL-----RACR 52
Query: 59 DLGR------QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYN 112
GR +IH + G G Y VG+ L+D+Y+K GL+ LP
Sbjct: 53 GNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLV---------LP-------- 95
Query: 113 TMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM 172
+RR+F + +D++SW M++G QNGL EA+ L+R+M G+
Sbjct: 96 --------------ARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVP 141
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
+ SVL++C +G+ IHA ++ +FVG+A++ +Y +C S + AE VF
Sbjct: 142 TPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVF 201
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
M ++ V++ ++ G+ Q G E A++IF MQ +G+ PD T+ S++++CA+L L+
Sbjct: 202 CDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQ 261
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
+GTQ H G+ S + +L+ Y KCG++E + +FN + + V W ++ +
Sbjct: 262 KGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFG 321
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
+ ++ +LF +M + G++P++ T +L C+ ++ G + VK G
Sbjct: 322 QINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKT-GFES-- 378
Query: 413 DHYT--CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
D Y +ID+ S+ G LE+A+ + +M D + W ++++
Sbjct: 379 DMYVSGVLIDMYSKYGWLEKARRVL-EMLKEKDVVSWTSMIA 419
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/679 (34%), Positives = 394/679 (58%), Gaps = 75/679 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSWN++I+ + G V +A+ + M + G+ L T+++ L + +
Sbjct: 230 MAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGV-RLDSTTYTSSLTACARLFSLGW 288
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H +++ +V S L+++YAK G
Sbjct: 289 GKQLHAKVIRSLPQIDPYVASALIELYAKCGSF--------------------------- 321
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+E++R+F ++D++S+SWT +I G +Q ++++LF +MR E +A+DQF ++
Sbjct: 322 ----KEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATL 377
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
++ C + L G+Q+H+ +++ H + V ++L+ +Y KC ++ AE VF +M+ +++
Sbjct: 378 ISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDI 437
Query: 241 VSWTAMLVGYGQ-------------------------------NGCSEEAVKIFCNM-QR 268
VSWT+M+ Y Q +G E+ +K++ M +
Sbjct: 438 VSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQ 497
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIED 328
+ PD T ++ CA++ + + G Q G ++ GLI ++V+NA +T Y KCG I +
Sbjct: 498 KDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISE 557
Query: 329 SHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
+ +LF+ +N +D VSW A+++GY++ G + F+ MLS G KPD ++ + VLS CS
Sbjct: 558 AQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSH 617
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
+GLV++G+ YF++M + +GI P +H++CM+D+L RAG L EAK I+KMP P A W
Sbjct: 618 SGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWG 677
Query: 449 TLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
LLS+C+IHGN E+ + AA+ + ELD + SY+LL+ IY+ GK D +Q+R+ MR+KG
Sbjct: 678 ALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKG 737
Query: 509 VRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVE 568
++K+PG SW++ +++VH+F ADD S P I +L++L K+ GYV
Sbjct: 738 IKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLDELMEKIAHLGYVR---------- 787
Query: 569 LSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVR 628
+E + HHSEKLA+AFG++ +P +PI ++KNLR+C DCH K IS +T RE ++R
Sbjct: 788 -TESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIR 846
Query: 629 DAVRFHLFKNGECSCGDFW 647
D VRFH FK+G CSCGD+W
Sbjct: 847 DGVRFHHFKSGSCSCGDYW 865
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 153/505 (30%), Positives = 251/505 (49%), Gaps = 37/505 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SWN L+SG+ D ++ + M + G + TF ++ + C +L
Sbjct: 97 MPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCREL 156
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
Q+ G KF F V + LVDM+ + G + A R F ++ I N+M+ G +
Sbjct: 157 APQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAK 216
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
++ + F M ++D +SW MI L Q+G REA+ L EM +G+ +D T+ S
Sbjct: 217 LYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSS 276
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LTAC L +L GKQ+HA +IR+ + + +V SAL+++Y KC S K A+ VF ++ +N
Sbjct: 277 LTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNS 336
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWT ++ G Q C ++V++F M+ + D F L ++IS C N L G Q H
Sbjct: 337 VSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSL 396
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG---KA 357
L +G I VSN+L++ Y KCG+++++ +F+ M+ RD VSWT++++ Y++ G KA
Sbjct: 397 CLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKA 456
Query: 358 NETID----------------------------LFEKMLSH-GLKPDEVTLIGVLSACSR 388
E D ++ MLS + PD VT + + C+
Sbjct: 457 REFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCAD 516
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
G + G VK I + I + S+ GR+ EA+ + + D + W
Sbjct: 517 IGANKLGDQIIGHTVKAGLILNV-SVANAAITMYSKCGRISEAQKLFDLLN-GKDVVSWN 574
Query: 449 TLLSSCRIHGNVEIGKWAAESLLEL 473
+++ HG +GK AA++ ++
Sbjct: 575 AMITGYSQHG---MGKQAAKTFDDM 596
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 132/522 (25%), Positives = 241/522 (46%), Gaps = 46/522 (8%)
Query: 54 SRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF-DELPEKNIVMYN 112
SR + R +HG ++ G S VF+ + L+ Y G + DA+R ++ E N++ +N
Sbjct: 16 SRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPNVITHN 75
Query: 113 TMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM 172
M+ G ++G + ++ LF M +D SW T+++G Q + ++ F M G ++
Sbjct: 76 IMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSL 135
Query: 173 -DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
+ FTF V+ +CG L E Q+ + D + V +ALVDM+ +C + +A +
Sbjct: 136 PNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRL 195
Query: 232 -------------------------------FRTMAWKNVVSWTAMLVGYGQNGCSEEAV 260
F MA ++VVSW M+ Q+G EA+
Sbjct: 196 FSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREAL 255
Query: 261 KIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFY 320
+ M R G+ D T S +++CA L SL G Q H + + + V++AL+ Y
Sbjct: 256 GLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELY 315
Query: 321 GKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLI 380
KCG+ +++ R+FN + R+ VSWT L+ G ++ +++++LF +M + + D+ L
Sbjct: 316 AKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALA 375
Query: 381 GVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF 440
++S C + GR + +K R I + +I + ++ G L+ A+ + M
Sbjct: 376 TLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNS-LISLYAKCGDLQNAEFVFSSMS- 433
Query: 441 PPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQL 500
D + W +++++ GN+ + E +D N ++ + Y G + ++
Sbjct: 434 ERDIVSWTSMITAYSQIGNIIKAR---EFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKM 490
Query: 501 RRTMREKGVRKDPGCSWIKYKSRVHIF--SADDWSSPYSDQI 540
M + KD W+ Y V +F AD ++ DQI
Sbjct: 491 YSAMLSQ---KDVTPDWVTY---VTLFRGCADIGANKLGDQI 526
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 135/342 (39%), Gaps = 70/342 (20%)
Query: 176 TFGSVLTACGGLLALEEGKQIHAFII-------------------------------RND 204
L +CG AL + +H ++ R D
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRAD 65
Query: 205 HKD-NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIF 263
K+ NV + +++ Y K S+ AE +F M ++V SW ++ GY Q + ++ F
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 264 CNMQRNGIE-PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGK 322
+M R+G P+ FT V+ SC L E Q G V ALV + +
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVR 185
Query: 323 CGNIEDSHRLFNE-------------------------------MNVRDEVSWTALVSGY 351
CG ++ + RLF++ M RD VSW +++
Sbjct: 186 CGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAAL 245
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
++ G+ E + L +M G++ D T L+AC+R + G+ +++ P
Sbjct: 246 SQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSL---PQ 302
Query: 412 HDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
D Y + +I++ ++ G +EAK N + +++ W L+
Sbjct: 303 IDPYVASALIELYAKCGSFKEAKRVFNSLQ-DRNSVSWTVLI 343
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 102/270 (37%), Gaps = 40/270 (14%)
Query: 277 TLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHR----- 331
L + SC + +L HGR + GL S + + N L+ Y CG + D+ R
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRAD 65
Query: 332 ---------------------------LFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
LF+ M RD SW L+SGY + + + ++ F
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 365 EKMLSHGLK-PDEVTLIGVLSACSRAGLVEKGRHYFEIMVK-EYGIRPIHDHYTCMIDIL 422
M G P+ T V+ +C G E + K ++ P D T ++D+
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDP--DVETALVDMF 183
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYV 482
R G ++ A +++ P + L +++G A E ++ + S+
Sbjct: 184 VRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGI----DHAIEYFEDMAERDVVSWN 239
Query: 483 LLSSIYASKGKWDHVSQLRRTMREKGVRKD 512
++ + + G+ L M KGVR D
Sbjct: 240 MMIAALSQSGRVREALGLVVEMHRKGVRLD 269
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/679 (34%), Positives = 394/679 (58%), Gaps = 75/679 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSWN++I+ + G V +A+ + M + G+ L T+++ L + +
Sbjct: 220 MAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGV-RLDSTTYTSSLTACARLFSLGW 278
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H +++ +V S L+++YAK G
Sbjct: 279 GKQLHAKVIRSLPQIDPYVASALIELYAKCGSF--------------------------- 311
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+E++R+F ++D++S+SWT +I G +Q ++++LF +MR E +A+DQF ++
Sbjct: 312 ----KEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATL 367
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
++ C + L G+Q+H+ +++ H + V ++L+ +Y KC ++ AE VF +M+ +++
Sbjct: 368 ISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDI 427
Query: 241 VSWTAMLVGYGQ-------------------------------NGCSEEAVKIFCNM-QR 268
VSWT+M+ Y Q +G E+ +K++ M +
Sbjct: 428 VSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQ 487
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIED 328
+ PD T ++ CA++ + + G Q G ++ GLI ++V+NA +T Y KCG I +
Sbjct: 488 KDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISE 547
Query: 329 SHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
+ +LF+ +N +D VSW A+++GY++ G + F+ MLS G KPD ++ + VLS CS
Sbjct: 548 AQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSH 607
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
+GLV++G+ YF++M + +GI P +H++CM+D+L RAG L EAK I+KMP P A W
Sbjct: 608 SGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWG 667
Query: 449 TLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
LLS+C+IHGN E+ + AA+ + ELD + SY+LL+ IY+ GK D +Q+R+ MR+KG
Sbjct: 668 ALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKG 727
Query: 509 VRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVE 568
++K+PG SW++ +++VH+F ADD S P I ++++L K+ GYV
Sbjct: 728 IKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYVR---------- 777
Query: 569 LSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVR 628
+E + HHSEKLA+AFG++ +P +PI ++KNLR+C DCH K IS +T RE ++R
Sbjct: 778 -TESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIR 836
Query: 629 DAVRFHLFKNGECSCGDFW 647
D VRFH FK+G CSCGD+W
Sbjct: 837 DGVRFHHFKSGSCSCGDYW 855
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 149/504 (29%), Positives = 256/504 (50%), Gaps = 42/504 (8%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSS-----SRRCVDLG 61
++ N++++G+A GS++DA ++++ M + + + + + T S + C +L
Sbjct: 88 ITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRELA 147
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
Q+ G KF F V + LVDM+ + G + A R F ++ I N+M+ G +
Sbjct: 148 PQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKL 207
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
++ + F M ++D +SW MI L Q+G REA+ L EM +G+ +D T+ S L
Sbjct: 208 YGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSL 267
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
TAC L +L GKQ+HA +IR+ + + +V SAL+++Y KC S K A+ VF ++ +N V
Sbjct: 268 TACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSV 327
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SWT ++ G Q C ++V++F M+ + D F L ++IS C N L G Q H
Sbjct: 328 SWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLC 387
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG---KAN 358
L +G I VSN+L++ Y KCG+++++ +F+ M+ RD VSWT++++ Y++ G KA
Sbjct: 388 LKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAR 447
Query: 359 ETID----------------------------LFEKMLSH-GLKPDEVTLIGVLSACSRA 389
E D ++ MLS + PD VT + + C+
Sbjct: 448 EFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADI 507
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
G + G VK I + I + S+ GR+ EA+ + + D + W
Sbjct: 508 GANKLGDQIIGHTVKAGLILNV-SVANAAITMYSKCGRISEAQKLFDLLN-GKDVVSWNA 565
Query: 450 LLSSCRIHGNVEIGKWAAESLLEL 473
+++ HG +GK AA++ ++
Sbjct: 566 MITGYSQHG---MGKQAAKTFDDM 586
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 198/421 (47%), Gaps = 23/421 (5%)
Query: 54 SRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF-DELPEKNIVMYN 112
SR + R +HG ++ G S VF+ + L+ Y G + DA+R ++ E N++ +N
Sbjct: 32 SRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHN 91
Query: 113 TMITGLLRRGLVEESRRLFRGMKDKDSISWTTMIT-------------GLMQNGLEREAI 159
M+ G ++G + ++ LF M +D SW T+++ L L + +
Sbjct: 92 IMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRELAPQLL 151
Query: 160 DLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMY 219
LF + G + + CG + + + + +F ++++ Y
Sbjct: 152 GLFWKFDFWGDPDVETALVDMFVRCGYV-------DFASRLFSQIERPTIFCRNSMLAGY 204
Query: 220 CKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLG 279
K I +A F MA ++VVSW M+ Q+G EA+ + M R G+ D T
Sbjct: 205 AKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYT 264
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
S +++CA L SL G Q H + + + V++AL+ Y KCG+ +++ R+FN + R
Sbjct: 265 SSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDR 324
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
+ VSWT L+ G ++ +++++LF +M + + D+ L ++S C + GR
Sbjct: 325 NSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLH 384
Query: 400 EIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+ +K R I + +I + ++ G L+ A+ + M D + W +++++ GN
Sbjct: 385 SLCLKSGHNRAIVVSNS-LISLYAKCGDLQNAEFVFSSMS-ERDIVSWTSMITAYSQIGN 442
Query: 460 V 460
+
Sbjct: 443 I 443
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 125/316 (39%), Gaps = 44/316 (13%)
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT- 234
L +CG AL + +H ++ VF+ + L+ Y C ++ A + R
Sbjct: 22 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 81
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR------NGIEPDDFTLGSVISSCANL 288
+ NV++ M+ GY + G +A ++F M R N + D SC L
Sbjct: 82 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGAL 141
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNE------------- 335
E Q G V ALV + +CG ++ + RLF++
Sbjct: 142 GCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSML 201
Query: 336 ------------------MNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEV 377
M RD VSW +++ ++ G+ E + L +M G++ D
Sbjct: 202 AGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDST 261
Query: 378 TLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--TCMIDILSRAGRLEEAKSFI 435
T L+AC+R + G+ +++ P D Y + +I++ ++ G +EAK
Sbjct: 262 TYTSSLTACARLFSLGWGKQLHAKVIRSL---PQIDPYVASALIELYAKCGSFKEAKRVF 318
Query: 436 NKMPFPPDAIGWATLL 451
N + +++ W L+
Sbjct: 319 NSLQ-DRNSVSWTVLI 333
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 102/244 (41%), Gaps = 14/244 (5%)
Query: 277 TLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN-E 335
L + SC + +L HGR + GL S + + N L+ Y CG + D+ RL +
Sbjct: 22 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 81
Query: 336 MNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS------HGLKPDEVTLIGVLSACSRA 389
+ + ++ +++GYAK G ++ +LF++M + L D G +C
Sbjct: 82 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGAL 141
Query: 390 GLVEKGRHYFEIMVK-EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
G E + K ++ P D T ++D+ R G ++ A +++ P +
Sbjct: 142 GCRELAPQLLGLFWKFDFWGDP--DVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNS 199
Query: 449 TLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
L +++G A E ++ + S+ ++ + + G+ L M KG
Sbjct: 200 MLAGYAKLYGIDH----AIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKG 255
Query: 509 VRKD 512
VR D
Sbjct: 256 VRLD 259
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/647 (36%), Positives = 386/647 (59%), Gaps = 28/647 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSWN+L++G+ G+ + + ++ M+ + F+T L S V
Sbjct: 76 MPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKE 135
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q HG + KFG + +V S LV MY++ + A + D +P +++
Sbjct: 136 GMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHV------------ 183
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
D S+ +++ L+++G EA+++ R M E +A D T+ V
Sbjct: 184 ----------------NDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGV 227
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ C + L+ G ++HA ++R + FVGS L+DMY KC + A +VF + +NV
Sbjct: 228 MGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNV 287
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V WTA++ Y QNG EE++ +F M R G P+++T ++++CA +A+L G H R
Sbjct: 288 VVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHAR 347
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
G + + V NAL+ Y K G+I+ S+ +F +M RD ++W A++ GY+ G +
Sbjct: 348 VEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQA 407
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ +F+ M+S P+ VT IGVLSA S GLV++G +Y +++ + I P +HYTCM+
Sbjct: 408 LQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVA 467
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+LSRAG L+EA++F+ D + W TLL++C +H N ++G+ AES+L++DP++ +
Sbjct: 468 LLSRAGLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQMDPHDVGT 527
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
Y LLS++YA +WD V +R+ MRE+ ++K+PG SW+ ++ +H+F ++ + P S QI
Sbjct: 528 YTLLSNMYAKARRWDGVVTIRKLMRERNIKKEPGASWLDIRNDIHVFLSEGSNHPESIQI 587
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y ++++L + GYVP+++SVLHDVE +K L++HSEKLA+A+GL+ IP PIR+
Sbjct: 588 YKKVQQLLALIKPLGYVPNIASVLHDVEDEQKEGYLSYHSEKLALAYGLMKIPSPAPIRI 647
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+KNLR+C DCH A K ISK+T R I+VRDA RFH F++G C+C D W
Sbjct: 648 IKNLRMCDDCHTAVKLISKVTNRLIIVRDANRFHHFRDGSCTCLDHW 694
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 148/287 (51%), Gaps = 13/287 (4%)
Query: 184 CGGLLALEEGKQIHA-FIIRNDHKDNVFVG--SALVDMYCKCKSIKYAESVFRTMAWKNV 240
C + L GK +HA F+IRN ++ + ++LV +Y KC + A ++F M +NV
Sbjct: 22 CADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNV 81
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VSW ++ GY G E + +F NM P+++ + +S+C++ ++EG Q HG
Sbjct: 82 VSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHG 141
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM---NVRDEVSWTALVSGYAKFGK 356
GL+ V +ALV Y +C ++E + ++ + + +V D S+ ++++ + G+
Sbjct: 142 LLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGR 201
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY- 415
E +++ +M+ + D VT +GV+ C++ ++ G +++ G+ + D +
Sbjct: 202 GEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRG-GL--MFDEFV 258
Query: 416 -TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+ +ID+ + G + A++ + + + + W L+++ +G E
Sbjct: 259 GSMLIDMYGKCGEVLNARNVFDGLQ-NRNVVVWTALMTAYLQNGYFE 304
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 255/647 (39%), Positives = 390/647 (60%), Gaps = 35/647 (5%)
Query: 3 FHDGVSWNLLISGHASHGSVN-DAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
F V+W LI+ H SH +++ A+ ++N M G ++ TFS++L S++ V G
Sbjct: 207 FKTIVTWTSLIT-HLSHFNMHLQALSLFNQMRCSG-PYPNQFTFSSILSASAATMMVLHG 264
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+Q+H I K GF + +FVG+ LVDMYAK ++ A R FD++PE+N+V
Sbjct: 265 QQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLV------------ 312
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE-MRLEGLAMDQFTFGSV 180
SW +MI G N L A+ +F++ +R + + ++ + SV
Sbjct: 313 -------------------SWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSV 353
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+AC + L G+Q+H +++ +V ++L+DMY KC+ +F+ + ++V
Sbjct: 354 LSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDV 413
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+W +++G+ QN EEA F M+R GI PD+ + +V+ S A+LA+L +GT H +
Sbjct: 414 VTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQ 473
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ G + + + +L+T Y KCG++ D++++F + + +SWTA++S Y G AN+
Sbjct: 474 IIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQV 533
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
I+LFE MLS G++P VT + VLSACS G VE+G +F M K + + P +HY CM+D
Sbjct: 534 IELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVD 593
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG L+EAK FI MP P W LL +CR +GN+++G+ AAE L E++PYNP +
Sbjct: 594 LLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGN 653
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLL+++ G+ + +++RR M GVRK+PGCSWI K+ +F+A D S SD+I
Sbjct: 654 YVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEI 713
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y LEKL + + K+GYV + V + +E +E+ + L +HSEKLA+AFGLL +P PIR+
Sbjct: 714 YKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRI 773
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLR C CH K SKI REI+VRD RFH F +G CSCGD+W
Sbjct: 774 KKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 820
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 204/408 (50%), Gaps = 40/408 (9%)
Query: 56 RCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
R + QIH I+ + S F+ + L+++YAK G + A
Sbjct: 156 RSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQA------------------- 196
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
LL L + F+ + ++WT++IT L + +A+ LF +MR G +QF
Sbjct: 197 --LL---LFSITHHHFKTI-----VTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQF 246
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
TF S+L+A + + G+Q+H+ I ++ N+FVG+ALVDMY KC + A VF M
Sbjct: 247 TFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQM 306
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR-NGIEPDDFTLGSVISSCANLASLEEG 294
+N+VSW +M+VG+ N + AV +F ++ R + P++ ++ SV+S+CAN+ L G
Sbjct: 307 PERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFG 366
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
Q HG + GL+ V N+L+ Y KC ++ +LF + RD V+W LV G+ +
Sbjct: 367 RQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQN 426
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
K E + F M G+ PDE + VL + + + +G + ++K ++ +
Sbjct: 427 DKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNM--- 483
Query: 415 YTC----MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
C +I + ++ G L +A + + I W ++S+ ++HG
Sbjct: 484 --CILGSLITMYAKCGSLVDAYQVFEGIE-DHNVISWTAMISAYQLHG 528
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 199/432 (46%), Gaps = 66/432 (15%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSWN +I G + + AV V+ +L++ + ++ S++L ++ ++
Sbjct: 306 MPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNF 365
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+HG ++K+G +V + L+DMY K + + F + ++++V +N ++ G +
Sbjct: 366 GRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFV- 424
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
QN EA + F MR EG+ D+ +F +V
Sbjct: 425 ------------------------------QNDKFEEACNYFWVMRREGILPDEASFSTV 454
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L + L AL +G IH II+ + N+ + +L+ MY KC S+ A VF + NV
Sbjct: 455 LHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNV 514
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SWTAM+ Y +GC+ + +++F +M GIEP T V+S+C++ +EEG
Sbjct: 515 ISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEG------ 568
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
L F +S + ++MN E + +V + G +E
Sbjct: 569 ---------------LAHF--------NSMKKIHDMNPGPE-HYACMVDLLGRAGWLDEA 604
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
E M +KP +L AC + G ++ GR E + + P +Y + +
Sbjct: 605 KRFIESM---PMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNP--GNYVLLAN 659
Query: 421 ILSRAGRLEEAK 432
+ +R+GRLEEA
Sbjct: 660 MCTRSGRLEEAN 671
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 84/176 (47%), Gaps = 4/176 (2%)
Query: 278 LGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN--E 335
L ++++ SL+ TQ H + ++ S + N L+ Y KCG + + LF+
Sbjct: 145 LNHLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITH 204
Query: 336 MNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG 395
+ + V+WT+L++ + F + + LF +M G P++ T +LSA + +V G
Sbjct: 205 HHFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHG 264
Query: 396 RHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
+ ++ ++G T ++D+ ++ + A ++MP + + W +++
Sbjct: 265 QQ-LHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMP-ERNLVSWNSMI 318
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 254/655 (38%), Positives = 381/655 (58%), Gaps = 43/655 (6%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P D VS+N LISG+A A+ ++ M + G + T S ++ R VDL
Sbjct: 101 PQPDTVSYNTLISGYADARETVAAMVLFKRMRELGF-EVDGFTLSGLIAACCDR--VDLI 157
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+Q+H + GF SY V + V Y+K
Sbjct: 158 KQLHCFAVSGGFDSYSSVNNAFVTYYSK-------------------------------G 186
Query: 122 GLVEESRRLFRGMKD-KDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL+ E+ +F GM +D +SW +MI Q+ +A+ L++EM +G +D FT SV
Sbjct: 187 GLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASV 246
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC---KSIKYAESVFRTMAW 237
L A L L G+Q H +I+ N VGS L+D Y KC + +E VF+ +
Sbjct: 247 LNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILS 306
Query: 238 KNVVSWTAMLVGYGQNG-CSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
++V W M+ GY N SEEAVK F MQR G PDD + V S+C+NL+S +G Q
Sbjct: 307 PDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQ 366
Query: 297 FHGRSLVTGLIS-FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
HG ++ + + S I+V+NAL++ Y K GN+ D+ R+F+ M + VS+ ++ GYA+ G
Sbjct: 367 IHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHG 426
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
E + L+++ML G+ P+ +T + +LSAC+ G V++G+ YF M + + I P +HY
Sbjct: 427 HGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHY 486
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
+CMID+L RAG+LEEA+ FI+ MP+ P ++ WA LL +CR H N+ + + AA+ L+ + P
Sbjct: 487 SCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQP 546
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSP 535
YV+L+++YA GKW+ ++ +R++MR K +RK PGCSWI+ K + H+F A+DWS P
Sbjct: 547 LAATPYVMLANMYADAGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHP 606
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKM---LNHHSEKLAIAFGLLFI 592
++ LE++ +KM K GYV D + + + + + L HHSEKLA+AFGL+
Sbjct: 607 MIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGEEEMRLGHHSEKLAVAFGLMST 666
Query: 593 PPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G I VVKNLR+C DCHNA K++S + REI+VRD +RFH FK+G+CSCGD+W
Sbjct: 667 RDGEEIVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 129/470 (27%), Positives = 228/470 (48%), Gaps = 11/470 (2%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
+F +L+ S + R + G+ +H +K S ++ + V++Y+K G + A+ FD
Sbjct: 10 SFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDST 69
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
E N+ YN ++ + + +R+LF D++S+ T+I+G A+ LF+
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFK 129
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
MR G +D FT ++ AC + L KQ+H F + V +A V Y K
Sbjct: 130 RMRELGFEVDGFTLSGLIAACCDRVDLI--KQLHCFAVSGGFDSYSSVNNAFVTYYSKGG 187
Query: 224 SIKYAESVFRTM-AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
++ A SVF M ++ VSW +M+V YGQ+ +A+ ++ M G + D FTL SV+
Sbjct: 188 LLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCG---NIEDSHRLFNEMNVR 339
++ +L L G QFHG+ + G V + L+ FY KCG + DS ++F E+
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSP 307
Query: 340 DEVSWTALVSGYAKFGK-ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
D V W ++SGY+ + + E + F +M G +PD+ + + V SACS +G+
Sbjct: 308 DLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQI 367
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ +K +I + ++G L +A+ ++MP +A+ + ++ HG
Sbjct: 368 HGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMP-ELNAVSFNCMIKGYAQHG 426
Query: 459 NVEIGKWAAESLLE--LDPYNPASYVLLSSIYASKGKWDHVSQLRRTMRE 506
+ + +L+ + P N ++V + S A GK D + TM+E
Sbjct: 427 HGTEALRLYQRMLDSGIAP-NNITFVAILSACAHCGKVDEGQKYFNTMKE 475
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 98/235 (41%), Gaps = 22/235 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRC--V 58
MP + VS+N +I G+A HG +A+++Y ML G+ + ITF + I+S+ C V
Sbjct: 407 MPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAP-NNITF--VAILSACAHCGKV 463
Query: 59 DLGRQIHGHILK-FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
D G++ + + F S ++D+ + G + +A+R D +P K + + G
Sbjct: 464 DEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLG 523
Query: 118 LLRR----GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
R+ L E + + M+ + + + G E + + MR
Sbjct: 524 ACRKHKNMALAERAAKELMVMQPLAATPYVMLANMYADAGKWEEMASVRKSMR------- 576
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRN-DHKDNVFVGSALVDMYCKCKSIKY 227
G + G +E K+ H F+ + H V L +M K K + Y
Sbjct: 577 ----GKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGY 627
>gi|30688521|ref|NP_850342.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|18491267|gb|AAL69458.1| At2g41080/T3K9.15 [Arabidopsis thaliana]
gi|330254831|gb|AEC09925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 565
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 230/565 (40%), Positives = 357/565 (63%), Gaps = 1/565 (0%)
Query: 84 VDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWT 143
+ MY+KLG A + + +KN + N +I G +R G + +R++F M D+ +W
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 144 TMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRN 203
MI GL+Q E + LFREM G + D++T GSV + GL ++ G+QIH + I+
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 204 DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIF 263
+ ++ V S+L MY + ++ E V R+M +N+V+W +++G QNGC E + ++
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 264 CNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKC 323
M+ +G P+ T +V+SSC++LA +G Q H ++ G S + V ++L++ Y KC
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC 240
Query: 324 GNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH-GLKPDEVTLIGV 382
G + D+ + F+E DEV W++++S Y G+ +E I+LF M ++ +EV + +
Sbjct: 241 GCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNL 300
Query: 383 LSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPP 442
L ACS +GL +KG F++MV++YG +P HYTC++D+L RAG L++A++ I MP
Sbjct: 301 LYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKT 360
Query: 443 DAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRR 502
D + W TLLS+C IH N E+ + + +L++DP + A YVLL++++AS +W VS++R+
Sbjct: 361 DIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRK 420
Query: 503 TMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSS 562
+MR+K V+K+ G SW ++K VH F D S S +IY+ L++L +M +GY PD +S
Sbjct: 421 SMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTAS 480
Query: 563 VLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQ 622
VLHD++ EK L HSEKLA+AF L+ +P G PIR++KNLRVCSDCH A KYIS I
Sbjct: 481 VLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKN 540
Query: 623 REILVRDAVRFHLFKNGECSCGDFW 647
REI +RD RFH F NG+CSCGD+W
Sbjct: 541 REITLRDGSRFHHFINGKCSCGDYW 565
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 169/373 (45%), Gaps = 37/373 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLG-NLSRITFSTMLIMSSSRRCVD 59
MP +WN +I+G + + ++ M GLG + T ++ S+ R V
Sbjct: 51 MPDRKLTTWNAMIAGLIQFEFNEEGLSLFREM--HGLGFSPDEYTLGSVFSGSAGLRSVS 108
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+G+QIHG+ +K+G + V S L MY + G + D + +P +N+V +NT+I
Sbjct: 109 IGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLI---- 164
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
G QNG + L++ M++ G ++ TF +
Sbjct: 165 ---------------------------MGNAQNGCPETVLYLYKMMKISGCRPNKITFVT 197
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL++C L +G+QIHA I+ V V S+L+ MY KC + A F ++
Sbjct: 198 VLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDED 257
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
V W++M+ YG +G +EA+++F M ++ +E ++ +++ +C++ ++G +
Sbjct: 258 EVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELF 317
Query: 299 GRSLVT-GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGK 356
+ G + +V G+ G ++ + + M ++ D V W L+S
Sbjct: 318 DMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKN 377
Query: 357 ANETIDLFEKMLS 369
A +F+++L
Sbjct: 378 AEMAQRVFKEILQ 390
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 132/281 (46%), Gaps = 43/281 (15%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+WN LI G+A +G + +Y +M G ++ITF T+L S
Sbjct: 152 MPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGC-RPNKITFVTVLSSCSDLAIRGQ 210
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIH +K G S V V S L+ MY+K G + DA + F E +++ VM+++MI+
Sbjct: 211 GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGF 270
Query: 121 RGLVEESRRLFRGMKDK-----DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
G +E+ LF M ++ + +++ ++ +GL+ + ++LF M ++++
Sbjct: 271 HGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMM------VEKY 324
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
F K + + +VD+ + + AE++ R+M
Sbjct: 325 GF----------------------------KPGLKHYTCVVDLLGRAGCLDQAEAIIRSM 356
Query: 236 AWK-NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDD 275
K ++V W +L + +E A ++F + + I+P+D
Sbjct: 357 PIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ--IDPND 395
>gi|3402709|gb|AAD12003.1| hypothetical protein [Arabidopsis thaliana]
Length = 563
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 230/563 (40%), Positives = 356/563 (63%), Gaps = 1/563 (0%)
Query: 86 MYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTM 145
MY+KLG A + + +KN + N +I G +R G + +R++F M D+ +W M
Sbjct: 1 MYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAM 60
Query: 146 ITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH 205
I GL+Q E + LFREM G + D++T GSV + GL ++ G+QIH + I+
Sbjct: 61 IAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGL 120
Query: 206 KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCN 265
+ ++ V S+L MY + ++ E V R+M +N+V+W +++G QNGC E + ++
Sbjct: 121 ELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKM 180
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M+ +G P+ T +V+SSC++LA +G Q H ++ G S + V ++L++ Y KCG
Sbjct: 181 MKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGC 240
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH-GLKPDEVTLIGVLS 384
+ D+ + F+E DEV W++++S Y G+ +E I+LF M ++ +EV + +L
Sbjct: 241 LGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLY 300
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDA 444
ACS +GL +KG F++MV++YG +P HYTC++D+L RAG L++A++ I MP D
Sbjct: 301 ACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDI 360
Query: 445 IGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTM 504
+ W TLLS+C IH N E+ + + +L++DP + A YVLL++++AS +W VS++R++M
Sbjct: 361 VIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSM 420
Query: 505 REKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVL 564
R+K V+K+ G SW ++K VH F D S S +IY+ L++L +M +GY PD +SVL
Sbjct: 421 RDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVL 480
Query: 565 HDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQRE 624
HD++ EK L HSEKLA+AF L+ +P G PIR++KNLRVCSDCH A KYIS I RE
Sbjct: 481 HDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNRE 540
Query: 625 ILVRDAVRFHLFKNGECSCGDFW 647
I +RD RFH F NG+CSCGD+W
Sbjct: 541 ITLRDGSRFHHFINGKCSCGDYW 563
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 169/373 (45%), Gaps = 37/373 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLG-NLSRITFSTMLIMSSSRRCVD 59
MP +WN +I+G + + ++ M GLG + T ++ S+ R V
Sbjct: 49 MPDRKLTTWNAMIAGLIQFEFNEEGLSLFREM--HGLGFSPDEYTLGSVFSGSAGLRSVS 106
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+G+QIHG+ +K+G + V S L MY + G + D + +P +N+V +NT+I
Sbjct: 107 IGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLI---- 162
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
G QNG + L++ M++ G ++ TF +
Sbjct: 163 ---------------------------MGNAQNGCPETVLYLYKMMKISGCRPNKITFVT 195
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL++C L +G+QIHA I+ V V S+L+ MY KC + A F ++
Sbjct: 196 VLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDED 255
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
V W++M+ YG +G +EA+++F M ++ +E ++ +++ +C++ ++G +
Sbjct: 256 EVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELF 315
Query: 299 GRSLVT-GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGK 356
+ G + +V G+ G ++ + + M ++ D V W L+S
Sbjct: 316 DMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKN 375
Query: 357 ANETIDLFEKMLS 369
A +F+++L
Sbjct: 376 AEMAQRVFKEILQ 388
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 132/281 (46%), Gaps = 43/281 (15%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+WN LI G+A +G + +Y +M G ++ITF T+L S
Sbjct: 150 MPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGC-RPNKITFVTVLSSCSDLAIRGQ 208
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIH +K G S V V S L+ MY+K G + DA + F E +++ VM+++MI+
Sbjct: 209 GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGF 268
Query: 121 RGLVEESRRLFRGMKDK-----DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
G +E+ LF M ++ + +++ ++ +GL+ + ++LF M ++++
Sbjct: 269 HGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMM------VEKY 322
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
F K + + +VD+ + + AE++ R+M
Sbjct: 323 GF----------------------------KPGLKHYTCVVDLLGRAGCLDQAEAIIRSM 354
Query: 236 AWK-NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDD 275
K ++V W +L + +E A ++F + + I+P+D
Sbjct: 355 PIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ--IDPND 393
>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
Length = 630
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/604 (39%), Positives = 358/604 (59%), Gaps = 31/604 (5%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
T +L + + RR + +G+ HG + FG + + L+++Y K G
Sbjct: 58 TLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCG------------ 105
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
+N + +RR+F M + ISW TMI G N + EA+ LF
Sbjct: 106 --QN-----------------DCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFS 146
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
M EG M +FT S L AC A+ E KQ+H I+ + FVG+A +D+Y KC
Sbjct: 147 RMHREGTQMTEFTLSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCN 206
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
IK A VF M K V+W+++ G+ QNG EE + +F + QR G++ +FT+ S++S
Sbjct: 207 MIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILS 266
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+CA+LA + EGTQ H + G + V+ +LV Y KCG IE S+ +F +M ++ V
Sbjct: 267 TCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVL 326
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
W A+++ +++ + E + LFEKM G+ P+EVT + +LSACS GLVE+GRHYF +++
Sbjct: 327 WNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLL 386
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
+ P HY+CM+D+L R+G+ +EA ++KMPF P A W +LL S RIH N+ +
Sbjct: 387 SDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLA 446
Query: 464 KWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSR 523
+ AAE L L+P N ++VLLS++YA+ G W++V R+ +R+ G +K+ G SWI+ K +
Sbjct: 447 RIAAEQLFRLEPENGGNHVLLSNVYAASGNWENVVVARKYLRDSGAKKEMGRSWIEAKGK 506
Query: 524 VHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKL 583
+H+F A + P +Y +LE++ +M K + + LHDV +K ++L HHSEKL
Sbjct: 507 IHVFVAGEREHPGITDVYNKLEEIYHEMRKISHRANTQCDLHDVHADQKEELLKHHSEKL 566
Query: 584 AIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSC 643
A AFGL+ +PP +PI + KNLR+C DCH+ K +S IT+R+++VRD RFH FK+G CSC
Sbjct: 567 AFAFGLISLPPNIPITIYKNLRICGDCHSFMKIVSCITERQVIVRDINRFHHFKDGSCSC 626
Query: 644 GDFW 647
GDFW
Sbjct: 627 GDFW 630
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 181/348 (52%), Gaps = 42/348 (12%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
+SWN +I+G+ + +A+K+++ M ++G ++ T S+ L +++ + +Q+H
Sbjct: 123 ISWNTMIAGYTHNREDVEALKLFSRMHREG-TQMTEFTLSSTLCACAAKYAIIECKQLHT 181
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+K S FVG+ +D+YAK +I DA F+ +PEK V ++++ G ++
Sbjct: 182 IAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQ------ 235
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
NGL E + LF+ + EG+ + +FT S+L+ C
Sbjct: 236 -------------------------NGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCAS 270
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L + EG Q+HA I+++ N+FV ++LVD+Y KC I+ + VF M KNVV W AM
Sbjct: 271 LALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAM 330
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG-----RS 301
+ + ++ S EA+ +F MQ+ GI P++ T S++S+C++ +EEG + R+
Sbjct: 331 IASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRT 390
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALV 348
++ + + +V G+ G +++ +L ++M S W +L+
Sbjct: 391 AEPNVLHY----SCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLL 434
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 148/308 (48%), Gaps = 6/308 (1%)
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
+R+E +D FT +L C +L GK H I + + L+++Y KC
Sbjct: 47 VRVERDLIDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQ 106
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
A VF M+ ++++SW M+ GY N EA+K+F M R G + +FTL S + +
Sbjct: 107 NDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCA 166
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
CA ++ E Q H ++ L S V A + Y KC I+D+ +F M + V+W
Sbjct: 167 CAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTW 226
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
++L +G+ + G E + LF+ G++ E T+ +LS C+ L+ +G ++VK
Sbjct: 227 SSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVK 286
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
+G T ++D+ ++ G++E++ M + + W +++S H +
Sbjct: 287 -HGFHRNLFVATSLVDVYAKCGQIEKSYEVFADME-EKNVVLWNAMIASFSRHAH----S 340
Query: 465 WAAESLLE 472
W A L E
Sbjct: 341 WEAMILFE 348
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 113/250 (45%), Gaps = 33/250 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP V+W+ L +G +G + + ++ ++G+ L+ T S++L +S +
Sbjct: 218 MPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGM-QLTEFTVSSILSTCASLALIIE 276
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+H I+K GF +FV + LVD+YAK G I + F ++ EKN+V++N MI R
Sbjct: 277 GTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSR 336
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SW MI LF +M+ G+ ++ T+ S+
Sbjct: 337 HAH-----------------SWEAMI--------------LFEKMQQVGIFPNEVTYLSI 365
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
L+AC +EEG+ ++ + + NV S +VD+ + A + M ++
Sbjct: 366 LSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEP 425
Query: 240 VVSWTAMLVG 249
S L+G
Sbjct: 426 TASMWGSLLG 435
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 232/679 (34%), Positives = 394/679 (58%), Gaps = 75/679 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN+++S + G +A+ V M G+ L T+++ L + +
Sbjct: 254 MPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGV-RLDSTTYTSSLTACAKLSSLGW 312
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H +++ +V S +V++YAK G
Sbjct: 313 GKQLHAQVIRSLPCIDPYVASAMVELYAKCGCF--------------------------- 345
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+E+RR+F ++D++++SWT +I G +Q G E+++LF +MR E + +DQF ++
Sbjct: 346 ----KEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATI 401
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
++ C + + +Q+H+ +++ H V + ++L+ MY KC +++ AES+F +M +++
Sbjct: 402 ISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDI 461
Query: 241 VSWTAMLVGYGQ-------------------------------NGCSEEAVKIFCNM-QR 268
VSWT ML Y Q +G E+ +K++ M
Sbjct: 462 VSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTE 521
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIED 328
+ PD T ++ CA++ + + G Q G ++ GLI +V NA++T Y KCG I +
Sbjct: 522 KDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISE 581
Query: 329 SHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
+ ++F+ ++ +D VSW A+++GY++ G + I++F+ ML G KPD ++ + VLS+CS
Sbjct: 582 ARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSH 641
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
+GLV++G+ YF+++ +++ + P +H++CM+D+L+RAG L EAK+ I++MP P A W
Sbjct: 642 SGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWG 701
Query: 449 TLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
LLS+C+ HGN E+ + AA+ L +LD + Y+LL+ IYA GK +Q+R+ MR+KG
Sbjct: 702 ALLSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKG 761
Query: 509 VRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVE 568
++K+PG SW++ K++VH+F A+D S P I +L++L K+ + GYV
Sbjct: 762 IKKNPGYSWMEVKNKVHVFKAEDVSHPQVIAIREKLDELMEKIAQLGYVR---------- 811
Query: 569 LSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVR 628
+E ++ HHSEKLA+AFG++ +P +PI ++KNLR+C DCH K IS +T RE ++R
Sbjct: 812 -TESLRSEIHHSEKLAVAFGIMNLPAWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIR 870
Query: 629 DAVRFHLFKNGECSCGDFW 647
DAVRFH FK G CSCGD+W
Sbjct: 871 DAVRFHHFKGGSCSCGDYW 889
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 145/500 (29%), Positives = 248/500 (49%), Gaps = 37/500 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SWN L+SG+ G DA++ + M + G + TF + + ++
Sbjct: 121 MPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEV 180
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
Q+ G + KFGF V + +VDM+ + G + A + F ++ + N+M+ G +
Sbjct: 181 ALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAK 240
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
V+ + LF M ++D +SW M++ L Q+G REA+ + +M G+ +D T+ S
Sbjct: 241 SYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSS 300
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LTAC L +L GKQ+HA +IR+ + +V SA+V++Y KC K A VF ++ +N
Sbjct: 301 LTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNT 360
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWT ++ G+ Q GC E++++F M+ + D F L ++IS C+N + Q H
Sbjct: 361 VSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSL 420
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
SL +G + +SN+L++ Y KCGN++++ +F+ M RD VSWT +++ Y++ G +
Sbjct: 421 SLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKA 480
Query: 361 IDLFEKM---------------LSHGLK-----------------PDEVTLIGVLSACSR 388
+ F+ M + HG + PD VT + + C+
Sbjct: 481 REFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCAD 540
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
G + G VK G+ +I + S+ GR+ EA+ + + D + W
Sbjct: 541 MGANKLGDQITGHTVK-VGLILDTSVMNAVITMYSKCGRISEARKIFDFLS-RKDLVSWN 598
Query: 449 TLLSSCRIHGNVEIGKWAAE 468
+++ HG +GK A E
Sbjct: 599 AMITGYSQHG---MGKQAIE 615
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 136/521 (26%), Positives = 248/521 (47%), Gaps = 52/521 (9%)
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAK---RGFDELPEKNIVMYNTMITGLLRR 121
HG ++ G S VF+ + L+ Y G + DA+ RG ++ E N++ +N M+ G +
Sbjct: 51 HGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRG--DITEPNVITHNIMMNGYAKL 108
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM-DQFTFGSV 180
G + ++ LF M +D SW T+++G Q+G +A++ F MR G ++ + FTFG
Sbjct: 109 GSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCA 168
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE----------- 229
+ +CG L E Q+ + + + + V + +VDM+ +C ++ +A
Sbjct: 169 MKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTV 228
Query: 230 --------------------SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN 269
+F +M ++VVSW M+ Q+G + EA+ + +M
Sbjct: 229 FCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNR 288
Query: 270 GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
G+ D T S +++CA L+SL G Q H + + + V++A+V Y KCG +++
Sbjct: 289 GVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEA 348
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
R+F+ + R+ VSWT L+ G+ ++G +E+++LF +M + + D+ L ++S CS
Sbjct: 349 RRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNR 408
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
+ R + +K R + + +I + ++ G L+ A+S + M D + W
Sbjct: 409 MDMCLARQLHSLSLKSGHTRAVVISNS-LISMYAKCGNLQNAESIFSSME-ERDIVSWTG 466
Query: 450 LLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKG-KWDHVSQLRRTMREKG 508
+L++ GN IGK A E + N ++ + Y G + D + + EK
Sbjct: 467 MLTAYSQVGN--IGK-AREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKD 523
Query: 509 VRKDPGCSWIKYKSRVHIF--SADDWSSPYSDQIYAELEKL 547
V D W+ Y V +F AD ++ DQI K+
Sbjct: 524 VIPD----WVTY---VTLFRGCADMGANKLGDQITGHTVKV 557
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 155/377 (41%), Gaps = 74/377 (19%)
Query: 176 TFGSVLTACGGLLALE--------------------EGKQIHAF-----------IIRND 204
L +CG AL + +HA+ ++R D
Sbjct: 30 ALADALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGD 89
Query: 205 -HKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIF 263
+ NV + +++ Y K S+ AE +F M ++V SW ++ GY Q+G +A++ F
Sbjct: 90 ITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESF 149
Query: 264 CNMQRNGIE-PDDFTLGSVISSCANLASLEEGTQFHG----------RSLVTGLISF--- 309
+M+R+G P+ FT G + SC L E Q G + TG++
Sbjct: 150 VSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVR 209
Query: 310 ------------------ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
+ N+++ Y K ++ + LF M RD VSW +VS
Sbjct: 210 CGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSAL 269
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
++ G+A E + + M + G++ D T L+AC++ + G+ +++ P
Sbjct: 270 SQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSL---PC 326
Query: 412 HDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG----NVEIGKW 465
D Y + M+++ ++ G +EA+ + + + + W L+ +G ++E+
Sbjct: 327 IDPYVASAMVELYAKCGCFKEARRVFSSLR-DRNTVSWTVLIGGFLQYGCFSESLELFNQ 385
Query: 466 AAESLLELDPYNPASYV 482
L+ +D + A+ +
Sbjct: 386 MRAELMTVDQFALATII 402
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 102/269 (37%), Gaps = 38/269 (14%)
Query: 277 TLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKC------------- 323
L + SC +L HGR + GL S + + N L+ Y C
Sbjct: 30 ALADALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGD 89
Query: 324 -------------------GNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G++ D+ LF M RD SW L+SGY + G+ + ++ F
Sbjct: 90 ITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESF 149
Query: 365 EKMLSHGLK-PDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
M G P+ T + +C G E ++ K +G + D T ++D+
Sbjct: 150 VSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTK-FGFQGDPDVATGIVDMFV 208
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
R G ++ A +++ P + L + +G V+ ES+ E D S+ +
Sbjct: 209 RCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYG-VDHALELFESMPERD---VVSWNM 264
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKD 512
+ S + G+ + M +GVR D
Sbjct: 265 MVSALSQSGRAREALSVAVDMHNRGVRLD 293
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 256/642 (39%), Positives = 377/642 (58%), Gaps = 49/642 (7%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
+S N +I+ H G +N A++V+ M + +T+++ML S+RR
Sbjct: 6 ISSNRVITNHIRSGDLNSALRVFESMTVK-----TTVTWNSMLAGYSNRR---------- 50
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
G I A++ FD +PE +I YN M+ L VE
Sbjct: 51 ------------------------GKIKVARQLFDRIPEPDIFSYNIMLACYLHNADVES 86
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+R F M KD+ SW TMI+G QNG+ +A +LF M + + ++ ++++
Sbjct: 87 ARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFLVMPVR----NSVSWNAMISGYVE 142
Query: 187 LLALEEGKQIHAFI-IRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
L+ KQ+ +R+ V +A++ + K I+ AE F M KN+V+W A
Sbjct: 143 SGDLDLAKQLFEVAPVRS-----VVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNA 197
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
M+ GY +N +E +K+F M +G P+ +L SV+ C+NL++L+ G Q H +
Sbjct: 198 MIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSP 257
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
+ IT +L++ Y KCG++ED+ +LF M +D V+W A++SGYA+ G + + LF+
Sbjct: 258 VSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFD 317
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
KM G+KPD +T + VLSAC+ AG V+ G YF MV++YG+ DHYTC++D+L R
Sbjct: 318 KMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRG 377
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
G+L EA I KMPF P + + TLL +CRIH N+E+ ++AA++LL LDP + A YV L+
Sbjct: 378 GKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHKNLELAEFAAKNLLNLDPESAAGYVQLA 437
Query: 486 SIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELE 545
++YA+ +WDHV+ +RR+M++ V K PG SWI+ KS VH F + D P I+ +L
Sbjct: 438 NVYAAMNRWDHVAMVRRSMKDNKVIKTPGYSWIEVKSVVHEFRSGDRIHPELAFIHEKLN 497
Query: 546 KLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
+L RKM GYVPD+ LHDV +K ++L HSEKLAIA+GL+ +P G PIRV KNLR
Sbjct: 498 ELERKMRLAGYVPDLEYALHDVGEEQKKQILLRHSEKLAIAYGLIRMPLGTPIRVFKNLR 557
Query: 606 VCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VC DCH+ATKYIS I R I+VRD RFH F+ GECSCGD+W
Sbjct: 558 VCGDCHSATKYISAIEGRVIIVRDTTRFHHFRQGECSCGDYW 599
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 173/386 (44%), Gaps = 73/386 (18%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SWN +ISG + +G ++ A +++ +M R V
Sbjct: 94 MPVKDTASWNTMISGFSQNGMMDQARELFLVM--------------------PVRNSVSW 133
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
I G Y + G + AK+ F+ P +++V + MITG ++
Sbjct: 134 NAMISG--------------------YVESGDLDLAKQLFEVAPVRSVVAWTAMITGFMK 173
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G +E + + F M K+ ++W MI G ++N + LF+ M G + + SV
Sbjct: 174 FGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSV 233
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C L AL+ GKQ+H I ++ N+ G++L+ MYCKC ++ A +F M K+V
Sbjct: 234 LLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDV 293
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+W AM+ GY Q+G E+A+ +F M+ G++PD T +V+S+C + ++ G ++
Sbjct: 294 VTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYF-- 351
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
N++V YG + +T +V + GK E
Sbjct: 352 -------------NSMVRDYGVEAKPD---------------HYTCVVDLLGRGGKLVEA 383
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSAC 386
+DL +KM KP +L AC
Sbjct: 384 VDLIKKM---PFKPHSAIFGTLLGAC 406
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 121/260 (46%), Gaps = 36/260 (13%)
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA-KFGKANETIDLFEK 366
S + SN ++T + + G++ + R+F M V+ V+W ++++GY+ + GK LF++
Sbjct: 3 SNVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDR 62
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD--HYTCMIDILSR 424
+ +PD + +L+ VE R +F+ M P+ D + MI S+
Sbjct: 63 I----PEPDIFSYNIMLACYLHNADVESARLFFDQM-------PVKDTASWNTMISGFSQ 111
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
G +++A+ MP +++ W ++S G++++ K L E+ P S V
Sbjct: 112 NGMMDQARELFLVMPV-RNSVSWNAMISGYVESGDLDLAK----QLFEVAPVR--SVVAW 164
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
+++ K+ + + EK + P + + + + + + Y + AE
Sbjct: 165 TAMITGFMKFGKIE-----LAEKYFEEMPMKNLVTWNAMI---------AGYIENCQAEN 210
Query: 545 E-KLNRKMIKEGYVPDMSSV 563
KL ++M++ G+ P+ SS+
Sbjct: 211 GLKLFKRMVESGFRPNPSSL 230
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 252/646 (39%), Positives = 391/646 (60%), Gaps = 42/646 (6%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V W LLI+ +A G ++AV+++ ML++G + T S+ML + LG+Q+H
Sbjct: 221 VVWTLLITRYAQSGYSDEAVELFLDMLENGF-QPDQYTLSSMLSACTELGSFRLGQQLHS 279
Query: 67 HILKFGFGSYVFVGSPLVDMYAKL---GLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
L+ G S V LVDMYAK +++A+ F+ +P+ N+
Sbjct: 280 LALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNV--------------- 324
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNG-LEREAIDLFREMRLEGLAMDQFTFGSVLT 182
++WT +++G +Q G + + + LF +M EG+ + T+ S+L
Sbjct: 325 ----------------MAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLK 368
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
AC L + G+QIH ++++ D VG+ALV MY + SI+ A F + KN+VS
Sbjct: 369 ACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVS 428
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL 302
++ L G G++ ++ ++R + FT GS+IS+ A++ L +G + H SL
Sbjct: 429 FSGNLDGDGRSNTYQDY-----QIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSL 483
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
G S + N+LV+ Y +CG + D+ ++F+EMN + +SWT+++SG AK G A ++
Sbjct: 484 KAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALE 543
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL 422
LF M++ G+KP++VT I VLSACS AGLV++G+ +F +M K +G+ P +HY CM+D+L
Sbjct: 544 LFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLL 603
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYV 482
R+G +E+A FIN+MP DA+ W TLL +C+ H N++IG+ AA +++L+P +PA YV
Sbjct: 604 GRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYV 663
Query: 483 LLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYA 542
LLS++YA G WD V+++R MR+K + K+ G SW+ + +H F A D S P +++IY
Sbjct: 664 LLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGDTSHPQAEEIYT 723
Query: 543 ELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGL-PIRVV 601
+LE L R++ GYVPD S VLHD+ K L HSEK+A+AFGL+ PIR+
Sbjct: 724 KLETLIREIKVMGYVPDTSVVLHDMSDELKELCLLQHSEKIAVAFGLISCTSATKPIRIF 783
Query: 602 KNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCH+A KY+SK T REI++RD+ RFH K+GECSCG++W
Sbjct: 784 KNLRVCVDCHSALKYVSKATGREIILRDSNRFHRMKDGECSCGEYW 829
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 121/389 (31%), Positives = 193/389 (49%), Gaps = 38/389 (9%)
Query: 58 VDLGRQIHGHILKFG--FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
+ LGR + GH+L+ G + V + L+ +Y+K + A+ FD +P
Sbjct: 63 IHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMP----------- 111
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
GL +D +SWT M + L +NG E EA+ LF E EGL + F
Sbjct: 112 VGL------------------RDLVSWTAMASCLSRNGAEAEALRLFGETLEEGLLPNAF 153
Query: 176 TFGSVLTAC--GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
T + AC L L G + +V VG AL+DM+ K + VF
Sbjct: 154 TLCAATQACFASELFHLAGGAVLGLVFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFD 213
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE 293
+ + VV WT ++ Y Q+G S+EAV++F +M NG +PD +TL S++S+C L S
Sbjct: 214 GLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRL 273
Query: 294 GTQFHGRSLVTGLISFITVSNALVTFYGKCGN---IEDSHRLFNEMNVRDEVSWTALVSG 350
G Q H +L GL S VS LV Y K N + ++ +FN M + ++WTAL+SG
Sbjct: 274 GQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSG 333
Query: 351 YAKFG-KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
Y + G + N+ + LF KML+ G++P+ +T +L AC+ G + GR VK +
Sbjct: 334 YVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKS-NLA 392
Query: 410 PIHDHYTCMIDILSRAGRLEEAKSFINKM 438
++ ++ + + +G +EEA+ +++
Sbjct: 393 DLNVVGNALVSMYAESGSIEEARHAFDQL 421
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 134/466 (28%), Positives = 224/466 (48%), Gaps = 47/466 (10%)
Query: 1 MP--FHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGL-GNLSRITFSTMLIMSSSRRC 57
MP D VSW + S + +G+ +A++++ L++GL N + +T +S
Sbjct: 110 MPVGLRDLVSWTAMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFH 169
Query: 58 VDLGRQIHGHILKFGF-GSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMIT 116
+ G + G + K GF G+ V VG L+DM+AK G + +R FD L E+ +V++ +I
Sbjct: 170 L-AGGAVLGLVFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLI- 227
Query: 117 GLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
T Q+G EA++LF +M G DQ+T
Sbjct: 228 ------------------------------TRYAQSGYSDEAVELFLDMLENGFQPDQYT 257
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC---KSIKYAESVFR 233
S+L+AC L + G+Q+H+ +R + + V LVDMY K +S+ A VF
Sbjct: 258 LSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFN 317
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKI-FCNMQRNGIEPDDFTLGSVISSCANLASLE 292
M NV++WTA+L GY Q G + V I FC M GI P+ T S++ +CANL +
Sbjct: 318 RMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQD 377
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
G Q H + + L V NALV+ Y + G+IE++ F+++ ++ VS++ + G
Sbjct: 378 SGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGD- 436
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
G++N D + + G+ T ++SA + G++ KG+ + +K G
Sbjct: 437 --GRSNTYQDYQIERMELGIST--FTFGSLISAAASVGMLTKGQRLHALSLKA-GFGSDR 491
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
++ + SR G L +A ++M + I W +++S HG
Sbjct: 492 AIGNSLVSMYSRCGYLVDACQVFDEMN-DHNVISWTSMISGLAKHG 536
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 212/424 (50%), Gaps = 54/424 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKV-YNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
MP H+ ++W L+SG+ GS ++ V + + ML +G+ + IT+S+ML ++ D
Sbjct: 319 MPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGI-RPNHITYSSMLKACANLGDQD 377
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
GRQIH H +K VG+ LV MYA+ G I +A+ FD+L EKN+V ++ + G
Sbjct: 378 SGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDG 437
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
R ++ ++ R+E L + FTFGS
Sbjct: 438 RSNTYQD-----------------------------------YQIERME-LGISTFTFGS 461
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+++A + L +G+++HA ++ + +G++LV MY +C + A VF M N
Sbjct: 462 LISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHN 521
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
V+SWT+M+ G ++G + A+++F +M G++P+D T +V+S+C++ ++EG + H
Sbjct: 522 VISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKE-HF 580
Query: 300 RSLVT--GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGK 356
R + GLI + +V G+ G +ED+ NEM + D + W L+ K
Sbjct: 581 RMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGAC----K 636
Query: 357 ANETIDLFEKMLSH--GLKPDEVTLIGVLSAC-SRAGLVEKGRHYFEIM-----VKEYGI 408
+ +D+ E +H L+P + +LS + AGL ++ +M +KE G+
Sbjct: 637 THNNMDIGEIAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGL 696
Query: 409 RPIH 412
+H
Sbjct: 697 SWMH 700
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 239/593 (40%), Positives = 358/593 (60%), Gaps = 32/593 (5%)
Query: 55 RRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTM 114
RR + GRQ+H ++ + VF+G+ LV MY + G + DA+ D
Sbjct: 55 RRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDR------------ 102
Query: 115 ITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
M ++ +SWTTMI+G Q EA+DLF +M G ++
Sbjct: 103 -------------------MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNE 143
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
+T +VLT+C G ++ +GKQ+H+ +++ + + ++FVGS+L+DMY K ++I+ A VF T
Sbjct: 144 YTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDT 203
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
+ ++VVS TA++ GY Q G EEA+ +F + G++ + T +++++ + LASL+ G
Sbjct: 204 LPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYG 263
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
Q H L L F+ + N+L+ Y KCG + S R+F+ M R VSW A++ GY +
Sbjct: 264 KQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRH 323
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G +E I LF K L +KPD VTL+ VLS CS GLV++G F+ +VKE H
Sbjct: 324 GLGHEVISLF-KDLHKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGH 382
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
Y C+ID+L R+GRLE+A + I MPF W +LL +CR+H NV +G+ A+ LLE++
Sbjct: 383 YGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEME 442
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS 534
P N +YV+LS+IYA+ G W V ++R+ M EK V K+PG SWI +H F + +
Sbjct: 443 PENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFH 502
Query: 535 PYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPP 594
P I A+++++ + G+VPD+S VLHDV+ +K +ML HSEKLAI FGL+ PP
Sbjct: 503 PSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPP 562
Query: 595 GLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
GL IRV+KNLR+C DCHN K++SK+ +REI +RD RFHL +G C+CGD+W
Sbjct: 563 GLTIRVMKNLRICVDCHNFAKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 615
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 186/353 (52%), Gaps = 37/353 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP VSW +ISG++ +A+ ++ ML+ G + T +T+L S + +
Sbjct: 103 MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIP-NEYTLATVLTSCSGPQSIYQ 161
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H ++K F S++FVGS L+DMYAK I +A+R FD LPE+++V +I+G +
Sbjct: 162 GKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQ 221
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+GL EE+ LF R++ EG+ + TF ++
Sbjct: 222 KGLDEEALDLF-------------------------------RQLYSEGMQCNHVTFTTL 250
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+TA GL +L+ GKQ+HA I+R + V + ++L+DMY KC + Y+ VF M ++V
Sbjct: 251 VTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSV 310
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW AML+GYG++G E + +F ++ + ++PD TL +V+S C++ ++EG
Sbjct: 311 VSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFD- 368
Query: 301 SLVTGLISFITVSN--ALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSG 350
++V + + + ++ G+ G +E + L M S W +L+
Sbjct: 369 TVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGA 421
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 162/294 (55%), Gaps = 2/294 (0%)
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M L G + + + +TAC AL EG+Q+HA +I ++ VF+G+ LV MY +C +
Sbjct: 33 MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 92
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A +V M ++VVSWT M+ GY Q EA+ +F M R G P+++TL +V++S
Sbjct: 93 LDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTS 152
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
C+ S+ +G Q H + T S + V ++L+ Y K NI+++ R+F+ + RD VS
Sbjct: 153 CSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSC 212
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
TA++SGYA+ G E +DLF ++ S G++ + VT +++A S ++ G+ ++++
Sbjct: 213 TAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILR 272
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ + +ID+ S+ G+L ++ + M + W +L HG
Sbjct: 273 K-ELPFFVALQNSLIDMYSKCGKLLYSRRVFDNM-LERSVVSWNAMLMGYGRHG 324
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/679 (34%), Positives = 394/679 (58%), Gaps = 75/679 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSWN++I+ + G V +A+ + M + G+ L T+++ L + +
Sbjct: 230 MAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGV-RLDSTTYTSSLTACARLFSLGW 288
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H +++ +V S L+++YAK G
Sbjct: 289 GKQLHAKVIRSLPQIDPYVASALIELYAKCGSF--------------------------- 321
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+E++R+F ++D++S+SWT +I G +Q ++++LF +MR E +A+DQF ++
Sbjct: 322 ----KEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATL 377
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
++ C + L G+Q+H+ +++ H + V ++L+ +Y KC ++ AE VF +M+ +++
Sbjct: 378 ISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDI 437
Query: 241 VSWTAMLVGYGQ-------------------------------NGCSEEAVKIFCNM-QR 268
VSWT+M+ Y Q +G E+ +K++ M +
Sbjct: 438 VSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQ 497
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIED 328
+ PD T ++ CA++ + + G Q G ++ GLI ++V+NA +T Y KCG I +
Sbjct: 498 KDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISE 557
Query: 329 SHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
+ +LF+ +N +D VSW A+++GY++ G + F+ MLS G KPD ++ + VLS CS
Sbjct: 558 AQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSH 617
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
+GLV++G+ YF++M + +GI P +H++CM+D+L RAG L EAK I+KMP P A W
Sbjct: 618 SGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWG 677
Query: 449 TLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
LLS+C+IHGN E+ + AA+ + ELD + SY+LL+ IY+ GK D +Q+R+ MR+KG
Sbjct: 678 ALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKG 737
Query: 509 VRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVE 568
++K+PG SW++ +++VH+F ADD S P I ++++L K+ GYV
Sbjct: 738 IKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYVR---------- 787
Query: 569 LSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVR 628
+E + HHSEKLA+AFG++ +P +PI ++KNLR+C DCH K IS +T RE ++R
Sbjct: 788 -TESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIR 846
Query: 629 DAVRFHLFKNGECSCGDFW 647
D VRFH FK+G CSCGD+W
Sbjct: 847 DGVRFHHFKSGSCSCGDYW 865
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 153/505 (30%), Positives = 251/505 (49%), Gaps = 37/505 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SWN L+SG+ D ++ + M + G + TF ++ + C +L
Sbjct: 97 MPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCREL 156
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
Q+ G KF F V + LVDM+ + G + A R F ++ I N+M+ G +
Sbjct: 157 APQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAK 216
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
++ + F M ++D +SW MI L Q+G REA+ L EM +G+ +D T+ S
Sbjct: 217 LYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSS 276
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LTAC L +L GKQ+HA +IR+ + + +V SAL+++Y KC S K A+ VF ++ +N
Sbjct: 277 LTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNS 336
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWT ++ G Q C ++V++F M+ + D F L ++IS C N L G Q H
Sbjct: 337 VSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSL 396
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG---KA 357
L +G I VSN+L++ Y KCG+++++ +F+ M+ RD VSWT++++ Y++ G KA
Sbjct: 397 CLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKA 456
Query: 358 NETID----------------------------LFEKMLSH-GLKPDEVTLIGVLSACSR 388
E D ++ MLS + PD VT + + C+
Sbjct: 457 REFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCAD 516
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
G + G VK I + I + S+ GR+ EA+ + + D + W
Sbjct: 517 IGANKLGDQIIGHTVKAGLILNV-SVANAAITMYSKCGRISEAQKLFDLLN-GKDVVSWN 574
Query: 449 TLLSSCRIHGNVEIGKWAAESLLEL 473
+++ HG +GK AA++ ++
Sbjct: 575 AMITGYSQHG---MGKQAAKTFDDM 596
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 211/440 (47%), Gaps = 35/440 (7%)
Query: 54 SRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF-DELPEKNIVMYN 112
SR + R +HG ++ G S VF+ + L+ Y G + DA+R ++ E N++ +N
Sbjct: 16 SRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHN 75
Query: 113 TMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM 172
M+ G ++G + ++ LF M +D SW T+++G Q + ++ F M G ++
Sbjct: 76 IMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSL 135
Query: 173 -DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
+ FTF V+ +CG L E Q+ + D + V +ALVDM+ +C + +A +
Sbjct: 136 PNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRL 195
Query: 232 -------------------------------FRTMAWKNVVSWTAMLVGYGQNGCSEEAV 260
F MA ++VVSW M+ Q+G EA+
Sbjct: 196 FSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREAL 255
Query: 261 KIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFY 320
+ M R G+ D T S +++CA L SL G Q H + + + V++AL+ Y
Sbjct: 256 GLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELY 315
Query: 321 GKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLI 380
KCG+ +++ R+FN + R+ VSWT L+ G ++ +++++LF +M + + D+ L
Sbjct: 316 AKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALA 375
Query: 381 GVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF 440
++S C + GR + +K R I + +I + ++ G L+ A+ + M
Sbjct: 376 TLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNS-LISLYAKCGDLQNAEFVFSSMS- 433
Query: 441 PPDAIGWATLLSSCRIHGNV 460
D + W +++++ GN+
Sbjct: 434 ERDIVSWTSMITAYSQIGNI 453
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 135/342 (39%), Gaps = 70/342 (20%)
Query: 176 TFGSVLTACGGLLALEEGKQIHAFII-------------------------------RND 204
L +CG AL + +H ++ R D
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 65
Query: 205 HKD-NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIF 263
K+ NV + +++ Y K S+ AE +F M ++V SW ++ GY Q + ++ F
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 264 CNMQRNGIE-PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGK 322
+M R+G P+ FT V+ SC L E Q G V ALV + +
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVR 185
Query: 323 CGNIEDSHRLFNE-------------------------------MNVRDEVSWTALVSGY 351
CG ++ + RLF++ M RD VSW +++
Sbjct: 186 CGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAAL 245
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
++ G+ E + L +M G++ D T L+AC+R + G+ +++ P
Sbjct: 246 SQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSL---PQ 302
Query: 412 HDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
D Y + +I++ ++ G +EAK N + +++ W L+
Sbjct: 303 IDPYVASALIELYAKCGSFKEAKRVFNSLQ-DRNSVSWTVLI 343
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 102/270 (37%), Gaps = 40/270 (14%)
Query: 277 TLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRL---- 332
L + SC + +L HGR + GL S + + N L+ Y CG + D+ RL
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 65
Query: 333 ----------------------------FNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
F+ M RD SW L+SGY + + + ++ F
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 365 EKMLSHGLK-PDEVTLIGVLSACSRAGLVEKGRHYFEIMVK-EYGIRPIHDHYTCMIDIL 422
M G P+ T V+ +C G E + K ++ P D T ++D+
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDP--DVETALVDMF 183
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYV 482
R G ++ A +++ P + L +++G A E ++ + S+
Sbjct: 184 VRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGI----DHAIEYFEDMAERDVVSWN 239
Query: 483 LLSSIYASKGKWDHVSQLRRTMREKGVRKD 512
++ + + G+ L M KGVR D
Sbjct: 240 MMIAALSQSGRVREALGLVVEMHRKGVRLD 269
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 248/647 (38%), Positives = 376/647 (58%), Gaps = 45/647 (6%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLK--DGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
VSWN +IS +A +G + +++ ML+ + I F L+ S +++G+QI
Sbjct: 77 VSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSG---LEIGKQI 133
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H H ++ G GS V + + +MY K G +
Sbjct: 134 HSHAIRSGLGSNASVNTAISNMYVKCGWL------------------------------- 162
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
E + +F M +K++++WT ++ G Q + +A+ LF +M EG+ +D++ F VL AC
Sbjct: 163 EGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKAC 222
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
GL L G+QIH I++ + V VG+ LVD Y KC +++ A F ++ N VSW+
Sbjct: 223 AGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWS 282
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
A++ GY Q G EEA+K F +++ ++ + FT S+ +C+ LA G Q H ++ +
Sbjct: 283 ALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKS 342
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
L+++ +A++T Y +CG ++ + R+F ++ D V+WTA+++GYA G A E + LF
Sbjct: 343 SLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLF 402
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+M G++P+ VT I VL+ACS +GLV +GR Y E M YG+ DHY CM+DI SR
Sbjct: 403 RRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSR 462
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG L+EA I MPF PDA+ W LL C + N+EIG+ AAE+L +LDP + A Y+L+
Sbjct: 463 AGFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILM 522
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
++YAS GKW + +R+ M E+ +RK+ CSWI K +VH F D P +++IY++L
Sbjct: 523 FNLYASFGKWKEAANVRKMMAERNLRKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKL 582
Query: 545 EKLNRKMIKE--GYVPDMSSVLHDV--ELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
E LN +IKE G + + DV L E+ + L HSE+LA+AFGL+ P P+ V
Sbjct: 583 EALNDSVIKEETGLLTE-----EDVSNSLPERKEQLLVHSERLALAFGLISTPSSAPVVV 637
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLR C DCH+ K +S IT REI+VRD+ RFH FK GECSC D+W
Sbjct: 638 FKNLRACKDCHDFGKQVSLITGREIVVRDSFRFHHFKLGECSCNDYW 684
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 192/400 (48%), Gaps = 33/400 (8%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR H + + F+ + ++ MY K G + DA++ FDE+ E+N+V +NT+I+
Sbjct: 29 GRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAE 88
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G+ ++ +F M + ++ + G ++ S+
Sbjct: 89 NGVFDKGFCMFSNMLELETKPNGSTYIGFLR---------------------------SL 121
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L G LE GKQIH+ IR+ N V +A+ +MY KC ++ AE VF M+ KN
Sbjct: 122 LNPSG----LEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNA 177
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+WT ++VGY Q +A+ +F M G+E D++ V+ +CA L L G Q HG
Sbjct: 178 VAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGH 237
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ GL S ++V LV FY KC N+E + + F ++ ++VSW+AL++GY + G+ E
Sbjct: 238 IVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEA 297
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ FE + + + + T + ACS G +K + H + MI
Sbjct: 298 LKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGE-SAMIT 356
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
+ SR GRL+ A + PDA+ W +++ GN
Sbjct: 357 MYSRCGRLDYATRVFESID-DPDAVAWTAIIAGYAYQGNA 395
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 168/352 (47%), Gaps = 34/352 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + V+W ++ G+ DA+ ++ M+ +G+ L FS +L + ++
Sbjct: 172 MSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGV-ELDEYVFSIVLKACAGLEELNF 230
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQIHGHI+K G S V VG+PLVD Y K + A + F+ + E N V ++ +ITG +
Sbjct: 231 GRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQ 290
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G E EA+ F +R + ++ FT+ S+
Sbjct: 291 MGEFE-------------------------------EALKTFESLRTRSVDINSFTYTSI 319
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
AC L G Q HA I++ SA++ MY +C + YA VF ++ +
Sbjct: 320 FQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDA 379
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF-HG 299
V+WTA++ GY G + EA+K+F MQ G+ P+ T +V+++C++ + EG Q+
Sbjct: 380 VAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLES 439
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
S G+ + I + +V Y + G ++++ L M D +SW L+ G
Sbjct: 440 MSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGG 491
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 193/423 (45%), Gaps = 38/423 (8%)
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M G+++ ++ + ACG + +L +G+ H + R F+ ++++ MYCKC S
Sbjct: 1 MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A VF M +N+VSW ++ Y +NG ++ +F NM +P+ T + S
Sbjct: 61 LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRS 120
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
N + LE G Q H ++ +GL S +V+ A+ Y KCG +E + +F +M+ ++ V+W
Sbjct: 121 LLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAW 180
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
T ++ GY + + + + LF KM++ G++ DE VL AC+ + GR +VK
Sbjct: 181 TGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVK 240
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS-CRI------- 456
G+ T ++D + LE A + P D + W+ L++ C++
Sbjct: 241 -LGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPND-VSWSALITGYCQMGEFEEAL 298
Query: 457 -------HGNVEIGKWAAESLLE----LDPYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
+V+I + S+ + L +N + +I +S + H TM
Sbjct: 299 KTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMY 358
Query: 506 EKGVRKDPGCSWIKYKSRVHIFSADD-----WSSPYSDQIY----AELEKLNRKMIKEGY 556
+ C + Y +RV S DD W++ + Y E KL R+M G
Sbjct: 359 SR-------CGRLDYATRV-FESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGV 410
Query: 557 VPD 559
P+
Sbjct: 411 RPN 413
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 239/593 (40%), Positives = 358/593 (60%), Gaps = 32/593 (5%)
Query: 55 RRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTM 114
RR + GRQ+H ++ + VF+G+ LV MY + G + DA+ D
Sbjct: 23 RRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDR------------ 70
Query: 115 ITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
M ++ +SWTTMI+G Q EA+DLF +M G ++
Sbjct: 71 -------------------MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNE 111
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
+T +VLT+C G ++ +GKQ+H+ +++ + + ++FVGS+L+DMY K ++I+ A VF T
Sbjct: 112 YTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDT 171
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
+ ++VVS TA++ GY Q G EEA+ +F + G++ + T +++++ + LASL+ G
Sbjct: 172 LPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYG 231
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
Q H L L F+ + N+L+ Y KCG + S R+F+ M R VSW A++ GY +
Sbjct: 232 KQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRH 291
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G +E I LF K L +KPD VTL+ VLS CS GLV++G F+ +VKE H
Sbjct: 292 GLGHEVISLF-KDLHKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGH 350
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
Y C+ID+L R+GRLE+A + I MPF W +LL +CR+H NV +G+ A+ LLE++
Sbjct: 351 YGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEME 410
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS 534
P N +YV+LS+IYA+ G W V ++R+ M EK V K+PG SWI +H F + +
Sbjct: 411 PENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFH 470
Query: 535 PYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPP 594
P I A+++++ + G+VPD+S VLHDV+ +K +ML HSEKLAI FGL+ PP
Sbjct: 471 PSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPP 530
Query: 595 GLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
GL IRV+KNLR+C DCHN K++SK+ +REI +RD RFHL +G C+CGD+W
Sbjct: 531 GLTIRVMKNLRICVDCHNFAKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 583
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 186/353 (52%), Gaps = 37/353 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP VSW +ISG++ +A+ ++ ML+ G + T +T+L S + +
Sbjct: 71 MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIP-NEYTLATVLTSCSGPQSIYQ 129
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H ++K F S++FVGS L+DMYAK I +A+R FD LPE+++V +I+G +
Sbjct: 130 GKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQ 189
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+GL EE+ LF R++ EG+ + TF ++
Sbjct: 190 KGLDEEALDLF-------------------------------RQLYSEGMQCNHVTFTTL 218
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+TA GL +L+ GKQ+HA I+R + V + ++L+DMY KC + Y+ VF M ++V
Sbjct: 219 VTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSV 278
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW AML+GYG++G E + +F ++ + ++PD TL +V+S C++ ++EG
Sbjct: 279 VSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFD- 336
Query: 301 SLVTGLISFITVSN--ALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSG 350
++V + + + ++ G+ G +E + L M S W +L+
Sbjct: 337 TVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGA 389
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 162/294 (55%), Gaps = 2/294 (0%)
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M L G + + + +TAC AL EG+Q+HA +I ++ VF+G+ LV MY +C +
Sbjct: 1 MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 60
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A +V M ++VVSWT M+ GY Q EA+ +F M R G P+++TL +V++S
Sbjct: 61 LDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTS 120
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
C+ S+ +G Q H + T S + V ++L+ Y K NI+++ R+F+ + RD VS
Sbjct: 121 CSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSC 180
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
TA++SGYA+ G E +DLF ++ S G++ + VT +++A S ++ G+ ++++
Sbjct: 181 TAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILR 240
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ + +ID+ S+ G+L ++ + M + W +L HG
Sbjct: 241 K-ELPFFVALQNSLIDMYSKCGKLLYSRRVFDNM-LERSVVSWNAMLMGYGRHG 292
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 256/649 (39%), Positives = 378/649 (58%), Gaps = 41/649 (6%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
SWN +I+ A G +A++ ++ M K L +R TF + S+ + GRQ H
Sbjct: 119 SWNSVIAELARSGDSVEALRAFSSMRKLSL-KPNRSTFPCAIKSCSALLDLHSGRQAHQQ 177
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
L FGF +FV S LVDMY+K G + DA+ FDE+ +NIV + +MITG +
Sbjct: 178 ALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYV-------- 229
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE--------GLAMDQFTFGS 179
QN A+ LF+E +E + +D S
Sbjct: 230 -----------------------QNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVS 266
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL+AC + + +H F+I+ + ++ V + L+D Y KC + + VF MA ++
Sbjct: 267 VLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERD 326
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQFH 298
V+SW +++ Y QNG S E+++IF M ++G I + TL +V+ +CA+ S G H
Sbjct: 327 VISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIH 386
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
+ + GL S + V +++ Y KCG +E + + F+ M ++ SW+A+V+GY G A
Sbjct: 387 DQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAK 446
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
E +++F +M G+KP+ +T + VL+ACS AGL+E+G H+F+ M E+ + P +HY CM
Sbjct: 447 EALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCM 506
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
+D+L RAG L+EA I M PD + W LL +CR+H NV++G+ +A L ELDP N
Sbjct: 507 VDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNC 566
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
YVLLS+IYA G+W+ V ++R M+ G+ K PG S + K RVH+F D P +
Sbjct: 567 GYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHE 626
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
+IY LEKL+ K+ + GYVPDM+SVLHDV EK +L HSEKLA+AFG++ PG I
Sbjct: 627 KIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTI 686
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
++KNLRVC DCH A K+ISKI REI+VRD+ RFH F++G CSCGD+W
Sbjct: 687 HIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 735
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 200/374 (53%), Gaps = 20/374 (5%)
Query: 130 LFRGMKDKDSI-SWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
LF DK ++ SW ++I L ++G EA+ F MR L ++ TF + +C LL
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 166
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
L G+Q H + + ++FV SALVDMY KC ++ A ++F ++ +N+VSWT+M+
Sbjct: 167 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 226
Query: 249 GYGQNGCSEEAVKIFCN--MQRNGIEP------DDFTLGSVISSCANLA--SLEEGTQFH 298
GY QN + A+ +F ++ +G E D + SV+S+C+ ++ S+ EG H
Sbjct: 227 GYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGV--H 284
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G + G + V N L+ Y KCG + S R+F+ M RD +SW ++++ YA+ G +
Sbjct: 285 GFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMST 344
Query: 359 ETIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
E++++F +M+ G + + VTL VL AC+ +G G+ + ++K G+ T
Sbjct: 345 ESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIK-MGLESNVFVGTS 403
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
+ID+ + G++E A+ ++M + W+ +++ +HG+ K A E E++
Sbjct: 404 IIDMYCKCGKVEMARKAFDRMR-EKNVKSWSAMVAGYGMHGH---AKEALEVFYEMNMAG 459
Query: 478 -PASYVLLSSIYAS 490
+Y+ S+ A+
Sbjct: 460 VKPNYITFVSVLAA 473
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 181/368 (49%), Gaps = 43/368 (11%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLML-----KDGLGNLSRITFSTMLIMSSSRRCVD-- 59
VSW +I+G+ + + A+ ++ L +G G + + + ++S+ R +
Sbjct: 219 VSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKS 278
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+ +HG ++K GF + V + L+D YAK G + ++R FD + E++++ +N++I
Sbjct: 279 ITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYA 338
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ G+ ES +F M I++ + T +
Sbjct: 339 QNGMSTESMEIFHRMVKDGEINYNAV------------------------------TLSA 368
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL AC + GK IH +I+ + NVFVG++++DMYCKC ++ A F M KN
Sbjct: 369 VLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKN 428
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FH 298
V SW+AM+ GYG +G ++EA+++F M G++P+ T SV+++C++ LEEG F
Sbjct: 429 VKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFK 488
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKA 357
S + + +V G+ G ++++ L M +R D V W AL+ +
Sbjct: 489 AMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGAC----RM 544
Query: 358 NETIDLFE 365
++ +DL E
Sbjct: 545 HKNVDLGE 552
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 122/249 (48%), Gaps = 33/249 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +SWN +I+ +A +G +++++++ M+KDG N + +T S +L+ + L
Sbjct: 322 MAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRL 381
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ IH ++K G S VFVG+ ++DMY K G + A++ FD + EKN+ ++ M+ G
Sbjct: 382 GKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGY-- 439
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GM +G +EA+++F EM + G+ + TF SV
Sbjct: 440 ------------GM-----------------HGHAKEALEVFYEMNMAGVKPNYITFVSV 470
Query: 181 LTACGGLLALEEGKQ-IHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK- 238
L AC LEEG A D + V +VD+ + +K A + + M +
Sbjct: 471 LAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRP 530
Query: 239 NVVSWTAML 247
+ V W A+L
Sbjct: 531 DFVVWGALL 539
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 243/644 (37%), Positives = 380/644 (59%), Gaps = 34/644 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +SWN ++S + + +A+ + M+++G S + + R ++ GR++
Sbjct: 329 DYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLIN-GREV 387
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H + +K S + + + L+DMY K Y+ V
Sbjct: 388 HAYAVKQRLDSDLQIANTLMDMYIKC--------------------YS-----------V 416
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
E S R+F M+ KD +SWTT+I Q+ EAI FR + EG+ +D GS+L AC
Sbjct: 417 ECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEAC 476
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
GL ++ KQ+H++ IRN D + + + ++D+Y +C + YA ++F + K++V+WT
Sbjct: 477 SGLKSISLLKQVHSYAIRNGLLD-LILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWT 535
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
+M+ + +NG EAV +F M GI+PD L ++ + A L+SL +G + HG +
Sbjct: 536 SMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRG 595
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
V ++LV Y CG++ + ++F+E +D V WTA+++ G + I +F
Sbjct: 596 KFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIF 655
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
++ML G+ PD V+ + +L ACS + LV++G+ Y ++MV +Y ++P +HY C++D+L R
Sbjct: 656 KRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGR 715
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
+G+ EEA FI MP P ++ W LL +CRIH N E+ A + LLEL+P NP +YVL+
Sbjct: 716 SGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLV 775
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S+++A GKW++V ++R M E+G+RKDP CSWI+ + VH F+A D S S I+ +L
Sbjct: 776 SNVFAEMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKL 835
Query: 545 EKLNRKMIKEG-YVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
++ K+ +EG YV D S VLHDV EKI +L+ HSE+LAI+FGL+ G P+R+ KN
Sbjct: 836 AEITEKLRREGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKN 895
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LRVC DCH TK +SK+ +REI+VRDA RFH F G CSCGDFW
Sbjct: 896 LRVCGDCHEFTKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 939
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 145/514 (28%), Positives = 231/514 (44%), Gaps = 78/514 (15%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKD---GLGNLSRITFSTMLIMSSSRRC 57
MP SWN LI S G +AV VY M T +++L +
Sbjct: 119 MPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGD 178
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
G ++HG +K G V + LV MYAK GL+
Sbjct: 179 GRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLL------------------------ 214
Query: 118 LLRRGLVEESRRLFRGMKD-KDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
+ + R+F M+D +D SW + I+G +QNG+ EA+DLFR M+ +G +M+ +T
Sbjct: 215 -------DSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYT 267
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
VL C L L G+++HA +++ + N+ + LV MY +C + A VFR +
Sbjct: 268 TVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQCNALLV-MYARCGWVDSALRVFREIG 326
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
K+ +SW +ML Y QN EA+ F M +NG PD + S++S+ +L L G +
Sbjct: 327 DKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGRE 386
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H ++ L S + ++N L+ Y KC ++E S R+F+ M ++D VSWT +++ YA+ +
Sbjct: 387 VHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSR 446
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACS----------------RAGLV-------- 392
+E I F G+K D + + +L ACS R GL+
Sbjct: 447 YSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLLDLILKNRI 506
Query: 393 -----EKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM---PFPPDA 444
E G + + + E + +T M++ + G L EA + KM PD+
Sbjct: 507 IDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDS 566
Query: 445 I----------GWATLLSSCRIHGNVEIGKWAAE 468
+ G ++L IHG + GK+ E
Sbjct: 567 VALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVE 600
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 188/416 (45%), Gaps = 42/416 (10%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILK---FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFD 101
+ +L + + RR V GRQ+H H + G F+ + L+ MY K G + DA
Sbjct: 58 YGWVLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDA----- 112
Query: 102 ELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDL 161
RLF GM + SW +I + +G EA+ +
Sbjct: 113 --------------------------HRLFDGMPARTVFSWNALIGACLSSGGAGEAVGV 146
Query: 162 FREMR----LEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVD 217
+R MR + G A D T SVL ACG G ++H +++ + V +ALV
Sbjct: 147 YRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVG 206
Query: 218 MYCKCKSIKYAESVFRTMA-WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDF 276
MY KC + A VF M ++V SW + + G QNG EA+ +F MQ +G + +
Sbjct: 207 MYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSY 266
Query: 277 TLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
T V+ CA LA L G + H L G F NAL+ Y +CG ++ + R+F E+
Sbjct: 267 TTVGVLQVCAELAQLNHGRELHAALLKCG-TEFNIQCNALLVMYARCGWVDSALRVFREI 325
Query: 337 NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR 396
+D +SW +++S Y + E ID F +M+ +G PD ++ +LSA G + GR
Sbjct: 326 GDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGR 385
Query: 397 HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
VK+ + T M D+ + +E + ++M D + W T+++
Sbjct: 386 EVHAYAVKQRLDSDLQIANTLM-DMYIKCYSVECSARVFDRMRI-KDHVSWTTIIA 439
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 130/324 (40%), Gaps = 29/324 (8%)
Query: 268 RNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFIT---VSNALVTFYGKCG 324
R P G V+ A ++ EG Q H ++ TG + ++ L+ YGKCG
Sbjct: 48 RGRAPPPTDHYGWVLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCG 107
Query: 325 NIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH----GLKPDEVTLI 380
+ D+HRLF+ M R SW AL+ G A E + ++ M + G PD TL
Sbjct: 108 RLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLA 167
Query: 381 GVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF 440
VL AC G G + VK G+ ++ + ++ G L+ A M
Sbjct: 168 SVLKACGAEGDGRCGSEVHGLAVKS-GLDRSTLVANALVGMYAKCGLLDSALRVFEWMRD 226
Query: 441 PPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS--SIYASKGKWDHVS 498
D W + +S C + + + ++ D ++ SY + + A + +H
Sbjct: 227 GRDVASWNSAISGC-VQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGR 285
Query: 499 QLRRTMREKGVRKD----------PGCSWIKYKSRVHIFSAD----DWSSPYS----DQI 540
+L + + G + C W+ RV D W+S S +++
Sbjct: 286 ELHAALLKCGTEFNIQCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRL 345
Query: 541 YAELEKLNRKMIKEGYVPDMSSVL 564
YAE +M++ G+ PD + ++
Sbjct: 346 YAEAIDFFGEMVQNGFNPDHACIV 369
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 251/670 (37%), Positives = 379/670 (56%), Gaps = 63/670 (9%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN +I G++ V +Y ML+ G+ R TF + + ++ GRQ+HGH+
Sbjct: 86 WNTMIRGYSRLDFPQLGVSLYLEMLRRGVKP-DRYTFPFLFKGFTRDIALEYGRQLHGHV 144
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
LK G VFV + LV MY G + A+ FD P+ +++ +N +I+ + G EESR
Sbjct: 145 LKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESR 204
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
RLF M+DK + T T VL+AC L
Sbjct: 205 RLFLVMEDKQVLPTTV-------------------------------TLVLVLSACSKLK 233
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM------AW----- 237
L GK++H+++ + N+ + +A++DMY C + A +FR+M +W
Sbjct: 234 DLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVS 293
Query: 238 --------------------KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFT 277
K+ VSWTAM+ GY ++ +EA+++F NMQ ++PD+FT
Sbjct: 294 GFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFT 353
Query: 278 LGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN 337
+ SV+++CA+L +LE G + + + V NAL+ Y KCG+++ + +F EM+
Sbjct: 354 MVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMS 413
Query: 338 VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH 397
RD+ +WTA++ G A G + +D+F ML + PDE+T IGVLSAC+ GLV+KGR
Sbjct: 414 QRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRK 473
Query: 398 YFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIH 457
YF M ++GI P HY C++D+L+RAGRL+EA I MP ++I W LL+ CR++
Sbjct: 474 YFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVY 533
Query: 458 GNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSW 517
++ + + +LEL+P N A YVLL +IYA+ +W+ + +LR+ M +KG++K PGCS
Sbjct: 534 RESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSL 593
Query: 518 IKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLN 577
I+ RVH F A D S P + I A+L+K+ + + GY PD+S V D+ +K +
Sbjct: 594 IEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVF 653
Query: 578 HHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFK 637
HSEKLAIAFGL+ PPG+ IR+ KNLR+C DCHN K +SK+ RE++VRD RFH FK
Sbjct: 654 RHSEKLAIAFGLINSPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFK 713
Query: 638 NGECSCGDFW 647
+G CSC D+W
Sbjct: 714 HGLCSCKDYW 723
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/395 (30%), Positives = 226/395 (57%), Gaps = 13/395 (3%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL- 60
P D ++WN++IS + G ++ +++ L+++D + T + +L++S+ + DL
Sbjct: 180 PKADVITWNMIISAYNKVGKFEESRRLF-LVMEDK--QVLPTTVTLVLVLSACSKLKDLR 236
Query: 61 -GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G+++H ++ S + + + ++DMYA G + A F + ++I+ + T+++G
Sbjct: 237 TGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFT 296
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
G ++ +R F M +KD +SWT MI G +++ +EA++LFR M+ + D+FT S
Sbjct: 297 NLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVS 356
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VLTAC L ALE G+ I +I RN K+++FV +AL+DMY KC + AES+FR M+ ++
Sbjct: 357 VLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRD 416
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+WTAM+VG NG E+A+ +F NM + I PD+ T V+S+C + +++G ++
Sbjct: 417 KFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFL 476
Query: 300 R-SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKA 357
R + G+ I LV + G +++++ + M ++ + + W AL++G + ++
Sbjct: 477 RMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRES 536
Query: 358 NETIDLFEKMLSHGLKPDE----VTLIGVLSACSR 388
+ + +++L L+PD V L + +AC R
Sbjct: 537 DMAEMVVKQILE--LEPDNGAVYVLLCNIYAACKR 569
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 176/371 (47%), Gaps = 33/371 (8%)
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G + +RRLF + + + W TMI G + + + L+ EM G+ D++TF +
Sbjct: 66 GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLF 125
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+ALE G+Q+H ++++ + NVFV +ALV MY C + A VF +V+
Sbjct: 126 KGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVI 185
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
+W ++ Y + G EE+ ++F M+ + P TL V+S+C+ L L G + H
Sbjct: 186 TWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV 245
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN--- 358
+ S + + NA++ Y CG ++ + +F MN RD +SWT +VSG+ G+ +
Sbjct: 246 KNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVAR 305
Query: 359 ----------------------------ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
E ++LF M + +KPDE T++ VL+AC+ G
Sbjct: 306 NYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLG 365
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATL 450
+E G + + I+ +ID+ + G +++A+S +M D W +
Sbjct: 366 ALELG-EWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMS-QRDKFTWTAM 423
Query: 451 LSSCRIHGNVE 461
+ ++G+ E
Sbjct: 424 IVGLAVNGHGE 434
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 250/649 (38%), Positives = 371/649 (57%), Gaps = 34/649 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN LI+ + + + + ML G+ N + S L + R + +
Sbjct: 21 MPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGI-NPGEVGISIFLSACTDAREITI 79
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR I IL G V + LV MY KLG DA
Sbjct: 80 GRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAAS---------------------- 117
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+F M +D ++W+ M+ +NG REA+ LFR+M L+G+A ++ T S
Sbjct: 118 ---------VFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSG 168
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L L G +H + + V VG+ALV++Y KC I+ A F + KNV
Sbjct: 169 LDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNV 228
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+W+A+ Y +N + +A+++ M G+ P+ T SV+ +CA +A+L++G + H R
Sbjct: 229 VAWSAISAAYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHER 288
Query: 301 SLVTG--LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
+ V G L S + V ALV Y KCGN+ + +F+++ D V W +L++ A+ G+
Sbjct: 289 TQVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTE 348
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
+ ++LFE+M GL+P +T VL ACS AG++++GR +F + ++GI P +H+ CM
Sbjct: 349 KALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCM 408
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
+D+L RAG + +++ + MPF P + W L +CR + N++ WAAE+L +LDP
Sbjct: 409 VDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKR 468
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
A YVLLS++YA G+W V+++R+ M+ K+ G SWI+ K RVH F + D P
Sbjct: 469 APYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIG 528
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
+I+AEL++L + M + GYVPD VLHDV+ K M+ +HSEKLA+AF LL P G PI
Sbjct: 529 EIHAELQRLTKLMKEAGYVPDTEMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPI 588
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RVVKNLRVC+DCH A+K+ISK+ REI+VRD RFH F+NG CSCGD+W
Sbjct: 589 RVVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 637
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 190/408 (46%), Gaps = 34/408 (8%)
Query: 83 LVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISW 142
++ Y+++G I ++ FDE+P +IV +N +I + G +D D W
Sbjct: 1 MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYI-------------GNRDFDR-CW 46
Query: 143 TTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIR 202
FR M L+G+ + L+AC + G+ I I+
Sbjct: 47 L-----------------FFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILG 89
Query: 203 NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKI 262
++ V +ALV MY K A SVF M+ ++VV+W+AM+ Y +NG EA+ +
Sbjct: 90 TGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGL 149
Query: 263 FCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGK 322
F M +G+ P+ TL S + +CA+L L G H R G+ S + V ALV YGK
Sbjct: 150 FRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGK 209
Query: 323 CGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGV 382
CG IE + F ++ ++ V+W+A+ + YA+ + + I + +M GL P+ T + V
Sbjct: 210 CGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSV 269
Query: 383 LSACSRAGLVEKGRHYFE-IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFP 441
L AC+ +++GR E V G+ T ++++ S+ G L A +K+
Sbjct: 270 LDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFDKIAH- 328
Query: 442 PDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYA 489
D + W +L+++ HG E E + L+ P S ++A
Sbjct: 329 LDLVLWNSLIATNAQHGQTEKALELFER-MRLEGLQPTIITFTSVLFA 375
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 250/656 (38%), Positives = 380/656 (57%), Gaps = 44/656 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+WN ++S + + +A++ M+ +G+ T S++L S + G+++
Sbjct: 266 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV-EPDEFTISSVLPACSHLEMLRTGKEL 324
Query: 65 HGHILKFG-FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
H + LK G FVGS LVDMY + +R FD + ++ I ++N MI G +
Sbjct: 325 HAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEH 384
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
+E+ LF GM++ GL + T V+ A
Sbjct: 385 DKEALLLFIGMEES------------------------------AGLLANSTTMAGVVPA 414
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C A + IH F+++ + FV + L+DMY + I A +F M +++V+W
Sbjct: 415 CVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTW 474
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQ-----------RNGIEPDDFTLGSVISSCANLASLE 292
M+ GY + E+A+ + MQ R ++P+ TL +++ SCA L++L
Sbjct: 475 NTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALA 534
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
+G + H ++ L + + V +ALV Y KCG ++ S ++F+++ ++ ++W ++ Y
Sbjct: 535 KGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYG 594
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
G E IDL M+ G+KP+EVT I V +ACS +G+V++G F +M +YG+ P
Sbjct: 595 MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSS 654
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIG-WATLLSSCRIHGNVEIGKWAAESLL 471
DHY C++D+L RAGR++EA +N MP + G W++LL + RIH N+EIG+ AA++L+
Sbjct: 655 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLI 714
Query: 472 ELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADD 531
+L+P + YVLL++IY+S G WD +++RR M+E+GVRK+PGCSWI++ VH F A D
Sbjct: 715 QLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGD 774
Query: 532 WSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLF 591
S P S+++ LE L +M KEGYVPD S VLH+VE EK +L HSEKLAIAFG+L
Sbjct: 775 SSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILN 834
Query: 592 IPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
PG IRV KNLRVC+DCH ATK+ISKI REI++RD RFH FKNG CSCGD+W
Sbjct: 835 TSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 133/473 (28%), Positives = 228/473 (48%), Gaps = 55/473 (11%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRC-----VD 59
+ VSWN LIS S A++ + ML + N+ +F+ + ++++ +
Sbjct: 163 NQVSWNSLISSLCSFEKWEMALEAFRCMLDE---NVEPSSFTLVSVVTACSNLPMPEGLM 219
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+G+Q+H + L+ G + F+ + LV MY KLG +
Sbjct: 220 MGKQVHAYGLRKGELNS-FIINTLVAMYGKLGKL-------------------------- 252
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
S+ L +D ++W T+++ L QN EA++ REM LEG+ D+FT S
Sbjct: 253 -----ASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISS 307
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
VL AC L L GK++HA+ ++N D N FVGSALVDMYC CK + VF M +
Sbjct: 308 VLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDR 367
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN-GIEPDDFTLGSVISSCANLASLEEGTQF 297
+ W AM+ GY QN +EA+ +F M+ + G+ + T+ V+ +C +
Sbjct: 368 KIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAI 427
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
HG + GL V N L+ Y + G I+ + R+F +M RD V+W +++GY
Sbjct: 428 HGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHH 487
Query: 358 NETIDLFEKM------LSHG-----LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY 406
+ + L KM +S G LKP+ +TL+ +L +C+ + KG+ +K
Sbjct: 488 EDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNN 547
Query: 407 GIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+ + ++D+ ++ G L+ ++ +++P + I W ++ + +HGN
Sbjct: 548 LATDVAVG-SALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 208/452 (46%), Gaps = 45/452 (9%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
W L+ + +AV Y M+ G+ F +L + + ++LG+QIH H+
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGI-KPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 69 LKFGFG-SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
KFG+G V V + LV++Y K G + FD + E+N
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERN-------------------- 163
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
+SW ++I+ L A++ FR M E + FT SV+TAC L
Sbjct: 164 -----------QVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 212
Query: 188 L---ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L GKQ+HA+ +R N F+ + LV MY K + ++ + + +++V+W
Sbjct: 213 PMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWN 271
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
+L QN EA++ M G+EPD+FT+ SV+ +C++L L G + H +L
Sbjct: 272 TVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKN 331
Query: 305 GLI---SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
G + SF V +ALV Y C + R+F+ M R W A+++GY++ E +
Sbjct: 332 GSLDENSF--VGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEAL 389
Query: 362 DLFEKM-LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
LF M S GL + T+ GV+ AC R+G + +VK G+ ++D
Sbjct: 390 LLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR-GLDRDRFVQNTLMD 448
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ SR G+++ A KM D + W T+++
Sbjct: 449 MYSRLGKIDIAMRIFGKME-DRDLVTWNTMIT 479
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 127/261 (48%), Gaps = 23/261 (8%)
Query: 224 SIKYAESVF----RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLG 279
++ A S+F R+ W W +L ++ EAV + +M GI+PD++
Sbjct: 47 AVSGAPSIFISQSRSPEW-----WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFP 101
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGL-ISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
+++ + A+L +E G Q H G + +TV+N LV Y KCG+ +++F+ ++
Sbjct: 102 ALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISE 161
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVE---KG 395
R++VSW +L+S F K ++ F ML ++P TL+ V++ACS + E G
Sbjct: 162 RNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMG 221
Query: 396 RHYFEIMVKEYGIRPIHDH---YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ V YG+R + ++ + + G+L +K + D + W T+LS
Sbjct: 222 KQ-----VHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFG-GRDLVTWNTVLS 275
Query: 453 S-CRIHGNVEIGKWAAESLLE 472
S C+ +E ++ E +LE
Sbjct: 276 SLCQNEQLLEALEYLREMVLE 296
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 125/261 (47%), Gaps = 46/261 (17%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAV----KVYNLMLKDGLG------NLSRITFSTMLI 50
M D V+WN +I+G+ DA+ K+ NL K G + IT T+L
Sbjct: 466 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 525
Query: 51 MSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVM 110
++ + G++IH + +K + V VGS LVDMYAK G + +++ FD++P+KN++
Sbjct: 526 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT 585
Query: 111 YNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL 170
+N +I M G+ NG +EAIDL R M ++G+
Sbjct: 586 WNVII-----------------------------MAYGMHGNG--QEAIDLLRMMMVQGV 614
Query: 171 AMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYA 228
++ TF SV AC ++EG +I ++++ D+ + + + +VD+ + IK A
Sbjct: 615 KPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEA 673
Query: 229 ESVFRTMA--WKNVVSWTAML 247
+ M + +W+++L
Sbjct: 674 YQLMNMMPRDFNKAGAWSSLL 694
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 241/626 (38%), Positives = 372/626 (59%), Gaps = 39/626 (6%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIH G FV L MY + G + DA++ FD + EK++V + ++ G R
Sbjct: 135 GKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYAR 194
Query: 121 RGLVEESRRLFRGMK----DKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
+G +EE R+ M+ + + +SW +++G ++G +EA+ +F++M G DQ T
Sbjct: 195 KGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVT 254
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK--------------- 221
SVL + G L G+QIH ++I+ + V SA++DMY K
Sbjct: 255 VSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFE 314
Query: 222 ------CKS----------IKYAESVFRTMAWK----NVVSWTAMLVGYGQNGCSEEAVK 261
C + + A +F + NVVSWT+++ G QNG EA++
Sbjct: 315 MMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALE 374
Query: 262 IFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYG 321
+F MQ G++P+ T+ S++ +C N+A+L G HG ++ L+ + V +AL+ Y
Sbjct: 375 LFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYA 434
Query: 322 KCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIG 381
KCG I+ S +FN M ++ V W +L++GY+ GKA E + +FE ++ LKPD ++
Sbjct: 435 KCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTS 494
Query: 382 VLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFP 441
+LSAC + GL ++G YF +M +EYGI+P +HY+CM+++L RAG+L+EA I ++PF
Sbjct: 495 LLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFE 554
Query: 442 PDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLR 501
PD+ W LL+SCR+ NV++ + AA+ L L+P NP +YVL+S+IYA+KG W V +R
Sbjct: 555 PDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIR 614
Query: 502 RTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMS 561
M G++K+PGCSWI+ K++V+ A D S P DQI ++++++ +M K G+ P++
Sbjct: 615 NKMESLGLKKNPGCSWIQVKNKVYTLLACDKSHPQIDQITEKMDEISEEMRKSGHRPNLD 674
Query: 562 SVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKIT 621
L DVE E+ +ML HSEKLA+ FGLL P G P++V+KNLR+C DCH K+IS
Sbjct: 675 FALQDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYA 734
Query: 622 QREILVRDAVRFHLFKNGECSCGDFW 647
REI +RD RFH FK+G CSCGDFW
Sbjct: 735 GREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 119/349 (34%), Positives = 198/349 (56%), Gaps = 7/349 (2%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSWN ++SG G +AV ++ M G ++T S++L +++GRQIHG
Sbjct: 218 VSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCP-DQVTVSSVLPSVGDSENLNMGRQIHG 276
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+++K G V S ++DMY K G +Y + FDE + N ITGL R GLV++
Sbjct: 277 YVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDK 336
Query: 127 SRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
+ +F K++ + +SWT++I G QNG + EA++LFREM++ G+ ++ T S+L
Sbjct: 337 ALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLP 396
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
ACG + AL G+ H F +R D+V VGSAL+DMY KC IK ++ VF M KN+V
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVC 456
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHGRS 301
W +++ GY +G ++E + IF ++ R ++PD + S++S+C + +EG + F+ S
Sbjct: 457 WNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMS 516
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVS 349
G+ + + +V G+ G +++++ L E+ D W AL++
Sbjct: 517 EEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLN 565
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 116/479 (24%), Positives = 199/479 (41%), Gaps = 103/479 (21%)
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
Q H ILK G + ++ + L+ Y+ DA +P+ + ++++I L +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAK 95
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
L +S I +F M GL D ++
Sbjct: 96 LFSQS-------------------------------IGVFSRMFSHGLIPDTHVLPNLFK 124
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
C L A + GKQIH + + FV +L MY +C + A VF M+ K+VV+
Sbjct: 125 VCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVT 184
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIE------------------------------ 272
+A+L GY + GC EE V+I M+++GIE
Sbjct: 185 CSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMH 244
Query: 273 -----PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIE 327
PD T+ SV+ S + +L G Q HG + GL+ V +A++ YGK G++
Sbjct: 245 HLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVY 304
Query: 328 DSHRLFNEMNVRDE-----------------------------------VSWTALVSGYA 352
+LF+E + + VSWT++++G A
Sbjct: 305 GIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCA 364
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
+ GK E ++LF +M G+KP+ VT+ +L AC + GR V+ + + +H
Sbjct: 365 QNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVH 424
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL 471
+ +ID+ ++ GR++ ++ N MP + + W +L++ +HG + ESL+
Sbjct: 425 VG-SALIDMYAKCGRIKMSQIVFNMMP-TKNLVCWNSLMNGYSMHGKAKEVMSIFESLM 481
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 68/167 (40%), Gaps = 2/167 (1%)
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
TQ H R L +G + +S L+ Y D+ + + S+++L+ K
Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKA 94
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
+++I +F +M SHGL PD L + C+ + G+ + G+
Sbjct: 95 KLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVS-GLDMDAFV 153
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+ + R GR+ +A+ ++M D + + LL G +E
Sbjct: 154 QGSLFHMYMRCGRMGDARKVFDRMS-EKDVVTCSALLCGYARKGCLE 199
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 250/656 (38%), Positives = 380/656 (57%), Gaps = 44/656 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+WN ++S + + +A++ M+ +G+ T S++L S + G+++
Sbjct: 179 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV-EPDEFTISSVLPACSHLEMLRTGKEL 237
Query: 65 HGHILKFG-FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
H + LK G FVGS LVDMY + +R FD + ++ I ++N MI G +
Sbjct: 238 HAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEH 297
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
+E+ LF GM++ GL + T V+ A
Sbjct: 298 DKEALLLFIGMEES------------------------------AGLLANSTTMAGVVPA 327
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C A + IH F+++ + FV + L+DMY + I A +F M +++V+W
Sbjct: 328 CVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTW 387
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQ-----------RNGIEPDDFTLGSVISSCANLASLE 292
M+ GY + E+A+ + MQ R ++P+ TL +++ SCA L++L
Sbjct: 388 NTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALA 447
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
+G + H ++ L + + V +ALV Y KCG ++ S ++F+++ ++ ++W ++ Y
Sbjct: 448 KGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYG 507
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
G E IDL M+ G+KP+EVT I V +ACS +G+V++G F +M +YG+ P
Sbjct: 508 MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSS 567
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIG-WATLLSSCRIHGNVEIGKWAAESLL 471
DHY C++D+L RAGR++EA +N MP + G W++LL + RIH N+EIG+ AA++L+
Sbjct: 568 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLI 627
Query: 472 ELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADD 531
+L+P + YVLL++IY+S G WD +++RR M+E+GVRK+PGCSWI++ VH F A D
Sbjct: 628 QLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGD 687
Query: 532 WSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLF 591
S P S+++ LE L +M KEGYVPD S VLH+VE EK +L HSEKLAIAFG+L
Sbjct: 688 SSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILN 747
Query: 592 IPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
PG IRV KNLRVC+DCH ATK+ISKI REI++RD RFH FKNG CSCGD+W
Sbjct: 748 TSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 803
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 133/471 (28%), Positives = 227/471 (48%), Gaps = 55/471 (11%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRC-----VDLG 61
VSWN LIS S A++ + ML + N+ +F+ + ++++ + +G
Sbjct: 78 VSWNSLISSLCSFEKWEMALEAFRCMLDE---NVEPSSFTLVSVVTACSNLPMPEGLMMG 134
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+Q+H + L+ G + F+ + LV MY KLG +
Sbjct: 135 KQVHAYGLRKGELNS-FIINTLVAMYGKLGKL---------------------------- 165
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
S+ L +D ++W T+++ L QN EA++ REM LEG+ D+FT SVL
Sbjct: 166 ---ASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVL 222
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
AC L L GK++HA+ ++N D N FVGSALVDMYC CK + VF M + +
Sbjct: 223 PACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKI 282
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRN-GIEPDDFTLGSVISSCANLASLEEGTQFHG 299
W AM+ GY QN +EA+ +F M+ + G+ + T+ V+ +C + HG
Sbjct: 283 GLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHG 342
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ GL V N L+ Y + G I+ + R+F +M RD V+W +++GY +
Sbjct: 343 FVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHED 402
Query: 360 TIDLFEKM------LSHG-----LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
+ L KM +S G LKP+ +TL+ +L +C+ + KG+ +K
Sbjct: 403 ALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLA 462
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+ + ++D+ ++ G L+ ++ +++P + I W ++ + +HGN
Sbjct: 463 TDVAVG-SALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 511
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 196/417 (47%), Gaps = 44/417 (10%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFG-SYVFVGSPLVDMYAKLGLIYDAKRGFDE 102
F +L + + ++LG+QIH H+ KFG+G V V + LV++Y K G + FD
Sbjct: 12 AFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR 71
Query: 103 LPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLF 162
+ E+N +SW ++I+ L A++ F
Sbjct: 72 ISERN-------------------------------QVSWNSLISSLCSFEKWEMALEAF 100
Query: 163 REMRLEGLAMDQFTFGSVLTACGGLL---ALEEGKQIHAFIIRNDHKDNVFVGSALVDMY 219
R M E + FT SV+TAC L L GKQ+HA+ +R N F+ + LV MY
Sbjct: 101 RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMY 159
Query: 220 CKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLG 279
K + ++ + + +++V+W +L QN EA++ M G+EPD+FT+
Sbjct: 160 GKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTIS 219
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGLI---SFITVSNALVTFYGKCGNIEDSHRLFNEM 336
SV+ +C++L L G + H +L G + SF V +ALV Y C + R+F+ M
Sbjct: 220 SVLPACSHLEMLRTGKELHAYALKNGSLDENSF--VGSALVDMYCNCKQVLSGRRVFDGM 277
Query: 337 NVRDEVSWTALVSGYAKFGKANETIDLFEKM-LSHGLKPDEVTLIGVLSACSRAGLVEKG 395
R W A+++GY++ E + LF M S GL + T+ GV+ AC R+G +
Sbjct: 278 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 337
Query: 396 RHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+VK G+ ++D+ SR G+++ A KM D + W T+++
Sbjct: 338 EAIHGFVVKR-GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMIT 392
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 123/245 (50%), Gaps = 7/245 (2%)
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHK-DNVFVGSALVDMYCKCK 223
M + G+ D + F ++L A L +E GKQIHA + + + D+V V + LV++Y KC
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
VF ++ +N VSW +++ E A++ F M +EP FTL SV++
Sbjct: 61 DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120
Query: 284 SCANLA---SLEEGTQFHGRSLVTG-LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
+C+NL L G Q H L G L SFI N LV YGK G + S L R
Sbjct: 121 ACSNLPMPEGLMMGKQVHAYGLRKGELNSFII--NTLVAMYGKLGKLASSKVLLGSFGGR 178
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
D V+W ++S + + E ++ +M+ G++PDE T+ VL ACS ++ G+
Sbjct: 179 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELH 238
Query: 400 EIMVK 404
+K
Sbjct: 239 AYALK 243
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 107/211 (50%), Gaps = 14/211 (6%)
Query: 270 GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL-ISFITVSNALVTFYGKCGNIED 328
GI+PD++ +++ + A+L +E G Q H G + +TV+N LV Y KCG+
Sbjct: 5 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 64
Query: 329 SHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
+++F+ ++ R++VSW +L+S F K ++ F ML ++P TL+ V++ACS
Sbjct: 65 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 124
Query: 389 AGLVE---KGRHYFEIMVKEYGIRPIHDH---YTCMIDILSRAGRLEEAKSFINKMPFPP 442
+ E G+ V YG+R + ++ + + G+L +K +
Sbjct: 125 LPMPEGLMMGKQ-----VHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFG-GR 178
Query: 443 DAIGWATLLSS-CRIHGNVEIGKWAAESLLE 472
D + W T+LSS C+ +E ++ E +LE
Sbjct: 179 DLVTWNTVLSSLCQNEQLLEALEYLREMVLE 209
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 125/261 (47%), Gaps = 46/261 (17%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAV----KVYNLMLKDGLG------NLSRITFSTMLI 50
M D V+WN +I+G+ DA+ K+ NL K G + IT T+L
Sbjct: 379 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 438
Query: 51 MSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVM 110
++ + G++IH + +K + V VGS LVDMYAK G + +++ FD++P+KN++
Sbjct: 439 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT 498
Query: 111 YNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL 170
+N +I M G+ NG +EAIDL R M ++G+
Sbjct: 499 WNVII-----------------------------MAYGMHGNG--QEAIDLLRMMMVQGV 527
Query: 171 AMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYA 228
++ TF SV AC ++EG +I ++++ D+ + + + +VD+ + IK A
Sbjct: 528 KPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEA 586
Query: 229 ESVFRTMA--WKNVVSWTAML 247
+ M + +W+++L
Sbjct: 587 YQLMNMMPRDFNKAGAWSSLL 607
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 232/545 (42%), Positives = 357/545 (65%), Gaps = 5/545 (0%)
Query: 107 NIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAID---LFR 163
++V+ N+++ + G +E +R++F M KD ++WT+MITG Q+G A LF
Sbjct: 125 DLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFL 184
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
EM +GL ++F S++ CG L + +GKQIH + ++NVFVGS+LVDMY +C
Sbjct: 185 EMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCG 244
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
++ + VF + KN VSW A++ G+ + G EEA+ +F MQR G +FT +++
Sbjct: 245 ELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLC 304
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
S + SLE+G H + +G V N L+ Y K GNI D+ ++F+ + D VS
Sbjct: 305 SSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVS 364
Query: 344 WTALVSGYAKFGKANETIDLFEKM-LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
+++ GYA+ G E ++LFE+M L ++P+++T + VL+ACS AGL+++G +YFE+M
Sbjct: 365 CNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELM 424
Query: 403 VKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
K+YG+ P HYT ++D+ RAG L++AKSFI +MP P+A W LL + ++H N E+
Sbjct: 425 -KKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEM 483
Query: 463 GKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKS 522
G +AA+ +LELDP+ P ++ LLS+IYAS G+W V+++R+ M++ G++K+P CSW++ ++
Sbjct: 484 GAYAAQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIEN 543
Query: 523 RVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEK 582
VHIFSA+D S P +++Y E LN+K+ + GYVPD S V V+ EK L +HSEK
Sbjct: 544 SVHIFSANDISHPQKNKVYEMWENLNQKIKEIGYVPDTSHVHVFVDQQEKELNLQYHSEK 603
Query: 583 LAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECS 642
LA+AF LL PG IR++KN+RVC DCH+A KY+S + +REI+VRD RFH F++G CS
Sbjct: 604 LALAFALLNTKPGSVIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFRDGSCS 663
Query: 643 CGDFW 647
C D+W
Sbjct: 664 CRDYW 668
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 184/364 (50%), Gaps = 38/364 (10%)
Query: 1 MPFHDGVSWNLLISGHASHG---SVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRC 57
M D V+W +I+G++ G S A+ ++ M++DGL S + C
Sbjct: 152 MCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSC 211
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
VD G+QIHG K+GF VFVGS LVDMYA
Sbjct: 212 VD-GKQIHGCCWKYGFQENVFVGSSLVDMYA----------------------------- 241
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
R G + ESR +F ++ K+ +SW +I+G + G EA+ LF +M+ EG +FT+
Sbjct: 242 --RCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTY 299
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
++L + +LE+GK +HA ++++ K +VG+ L+ MY K +I A+ VF +
Sbjct: 300 SALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVK 359
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR-NGIEPDDFTLGSVISSCANLASLEEGTQ 296
+VVS +ML+GY Q+G +EAV++F M IEP+D T SV+++C++ L+EG
Sbjct: 360 VDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLY 419
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFG 355
+ GL ++ +V +G+ G ++ + EM + + W AL+ G +K
Sbjct: 420 YFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALL-GASKMH 478
Query: 356 KANE 359
K E
Sbjct: 479 KNTE 482
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 170/318 (53%), Gaps = 11/318 (3%)
Query: 159 IDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDM 218
+DL LE D+ + +L C L L++GK +H ++ + ++++ + ++++ M
Sbjct: 79 LDLINNGSLEP---DRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFM 135
Query: 219 YCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVK---IFCNMQRNGIEPDD 275
Y KC S++ A VF M K+VV+WT+M+ GY Q+G + A +F M R+G+ P++
Sbjct: 136 YAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNE 195
Query: 276 FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNE 335
F L S++ C L S +G Q HG G + V ++LV Y +CG + +S +F+E
Sbjct: 196 FALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDE 255
Query: 336 MNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG 395
+ ++EVSW AL+SG+A+ G+ E + LF KM G E T +L + S G +E+G
Sbjct: 256 LESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQG 315
Query: 396 RHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCR 455
+ M+K G + + ++ + +++G + +AK +++ D + ++L
Sbjct: 316 KWLHAHMMKS-GKKLVGYVGNTLLHMYAKSGNICDAKKVFDRL-VKVDVVSCNSMLIGYA 373
Query: 456 IHGNVEIGKWAAESLLEL 473
HG +GK A E E+
Sbjct: 374 QHG---LGKEAVELFEEM 388
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 250/656 (38%), Positives = 380/656 (57%), Gaps = 44/656 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+WN ++S + + +A++ M+ +G+ T S++L S + G+++
Sbjct: 266 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV-EPDEFTISSVLPACSHLEMLRTGKEL 324
Query: 65 HGHILKFG-FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
H + LK G FVGS LVDMY + +R FD + ++ I ++N MI G +
Sbjct: 325 HAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEH 384
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
+E+ LF GM++ GL + T V+ A
Sbjct: 385 DKEALLLFIGMEES------------------------------AGLLANSTTMAGVVPA 414
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C A + IH F+++ + FV + L+DMY + I A +F M +++V+W
Sbjct: 415 CVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTW 474
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQ-----------RNGIEPDDFTLGSVISSCANLASLE 292
M+ GY + E+A+ + MQ R ++P+ TL +++ SCA L++L
Sbjct: 475 NTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALA 534
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
+G + H ++ L + + V +ALV Y KCG ++ S ++F+++ ++ ++W ++ Y
Sbjct: 535 KGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYG 594
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
G E IDL M+ G+KP+EVT I V +ACS +G+V++G F +M +YG+ P
Sbjct: 595 MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSS 654
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIG-WATLLSSCRIHGNVEIGKWAAESLL 471
DHY C++D+L RAGR++EA +N MP + G W++LL + RIH N+EIG+ AA++L+
Sbjct: 655 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLI 714
Query: 472 ELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADD 531
+L+P + YVLL++IY+S G WD +++RR M+E+GVRK+PGCSWI++ VH F A D
Sbjct: 715 QLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGD 774
Query: 532 WSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLF 591
S P S+++ LE L +M KEGYVPD S VLH+VE EK +L HSEKLAIAFG+L
Sbjct: 775 SSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILN 834
Query: 592 IPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
PG IRV KNLRVC+DCH ATK+ISKI REI++RD RFH FKNG CSCGD+W
Sbjct: 835 TSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 133/473 (28%), Positives = 228/473 (48%), Gaps = 55/473 (11%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRC-----VD 59
+ VSWN LIS S A++ + ML + N+ +F+ + ++++ +
Sbjct: 163 NQVSWNSLISSLCSFEKWEMALEAFRCMLDE---NVEPSSFTLVSVVTACSNLPMPEGLM 219
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+G+Q+H + L+ G + F+ + LV MY KLG +
Sbjct: 220 MGKQVHAYGLRKGELNS-FIINTLVAMYGKLGKL-------------------------- 252
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
S+ L +D ++W T+++ L QN EA++ REM LEG+ D+FT S
Sbjct: 253 -----ASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISS 307
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
VL AC L L GK++HA+ ++N D N FVGSALVDMYC CK + VF M +
Sbjct: 308 VLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDR 367
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN-GIEPDDFTLGSVISSCANLASLEEGTQF 297
+ W AM+ GY QN +EA+ +F M+ + G+ + T+ V+ +C +
Sbjct: 368 KIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAI 427
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
HG + GL V N L+ Y + G I+ + R+F +M RD V+W +++GY
Sbjct: 428 HGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHH 487
Query: 358 NETIDLFEKM------LSHG-----LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY 406
+ + L KM +S G LKP+ +TL+ +L +C+ + KG+ +K
Sbjct: 488 EDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNN 547
Query: 407 GIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+ + ++D+ ++ G L+ ++ +++P + I W ++ + +HGN
Sbjct: 548 LATDVAVG-SALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 208/452 (46%), Gaps = 45/452 (9%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
W L+ + +AV Y M+ G+ F +L + + ++LG+QIH H+
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGI-KPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 69 LKFGFG-SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
KFG+G V V + LV++Y K G + FD + E+N
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERN-------------------- 163
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
+SW ++I+ L A++ FR M E + FT SV+TAC L
Sbjct: 164 -----------QVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 212
Query: 188 L---ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L GKQ+HA+ +R N F+ + LV MY K + ++ + + +++V+W
Sbjct: 213 PMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWN 271
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
+L QN EA++ M G+EPD+FT+ SV+ +C++L L G + H +L
Sbjct: 272 TVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKN 331
Query: 305 GLI---SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
G + SF V +ALV Y C + R+F+ M R W A+++GY++ E +
Sbjct: 332 GSLDENSF--VGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEAL 389
Query: 362 DLFEKM-LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
LF M S GL + T+ GV+ AC R+G + +VK G+ ++D
Sbjct: 390 LLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR-GLDRDRFVQNTLMD 448
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ SR G+++ A KM D + W T+++
Sbjct: 449 MYSRLGKIDIAMRIFGKME-DRDLVTWNTMIT 479
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 127/261 (48%), Gaps = 23/261 (8%)
Query: 224 SIKYAESVF----RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLG 279
++ A S+F R+ W W +L ++ EAV + +M GI+PD++
Sbjct: 47 AVSGAPSIFISQSRSPEW-----WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFP 101
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGL-ISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
+++ + A+L +E G Q H G + +TV+N LV Y KCG+ +++F+ ++
Sbjct: 102 ALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISE 161
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVE---KG 395
R++VSW +L+S F K ++ F ML ++P TL+ V++ACS + E G
Sbjct: 162 RNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMG 221
Query: 396 RHYFEIMVKEYGIRPIHDH---YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ V YG+R + ++ + + G+L +K + D + W T+LS
Sbjct: 222 KQ-----VHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFG-GRDLVTWNTVLS 275
Query: 453 S-CRIHGNVEIGKWAAESLLE 472
S C+ +E ++ E +LE
Sbjct: 276 SLCQNEQLLEALEYLREMVLE 296
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 125/261 (47%), Gaps = 46/261 (17%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAV----KVYNLMLKDGLG------NLSRITFSTMLI 50
M D V+WN +I+G+ DA+ K+ NL K G + IT T+L
Sbjct: 466 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 525
Query: 51 MSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVM 110
++ + G++IH + +K + V VGS LVDMYAK G + +++ FD++P+KN++
Sbjct: 526 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT 585
Query: 111 YNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL 170
+N +I M G+ NG +EAIDL R M ++G+
Sbjct: 586 WNVII-----------------------------MAYGMHGNG--QEAIDLLRMMMVQGV 614
Query: 171 AMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYA 228
++ TF SV AC ++EG +I ++++ D+ + + + +VD+ + IK A
Sbjct: 615 KPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEA 673
Query: 229 ESVFRTMA--WKNVVSWTAML 247
+ M + +W+++L
Sbjct: 674 YQLMNMMPRDFNKAGAWSSLL 694
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 245/642 (38%), Positives = 383/642 (59%), Gaps = 19/642 (2%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
+W+ +I + SH ++ + +N M + +R F ++L S+ + L +H
Sbjct: 77 AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPP-NRHVFPSLLKASTLLKHHKLAHSLHAC 135
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
++ G S +++ + L++ YAK ++A + FD P++ ++
Sbjct: 136 TVRLGLDSDLYIANALINTYAKF---HNAGKVFDVFPKRG-------------ESGIDCV 179
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG-LAMDQFTFGSVLTACGG 186
+++F M +D +SW T+I G QNG+ EA+D+ REM G L D FT S+L
Sbjct: 180 KKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAE 239
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+ + +GK+IH + +RN +VF+GS+L+DMY KC ++ + F + K+ +SW ++
Sbjct: 240 HVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSI 299
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ G QNG + + F M + ++P + SVI +CA+L +L G Q HG + G
Sbjct: 300 IAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGF 359
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
++++LV Y KCGNI+ + +F+ ++ RD V+WTA++ G A G A + + LFE
Sbjct: 360 DDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFEN 419
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
ML G++P V + VL+ACS AGLV++G YF M +++GI P +HY + D+L RAG
Sbjct: 420 MLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAG 479
Query: 427 RLEEAKSFINKMP-FPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
RLEEA FI+ M P W+ LL++CR H +VE+ + + LL +D N +YVL+S
Sbjct: 480 RLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMS 539
Query: 486 SIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELE 545
+IY++ +W ++LR MR+KG++K P CSWI+ ++VH F A D S PY D+I L+
Sbjct: 540 NIYSAAQRWKDAARLRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALD 599
Query: 546 KLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
L +M KEGYV D + VLHDV+ K ++L++HSE+LAIA+G++ G IRV+KN+R
Sbjct: 600 VLLEQMEKEGYVIDTNQVLHDVDEELKRELLHNHSERLAIAYGIISTTAGTTIRVIKNIR 659
Query: 606 VCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VC+DCH A K+I+KI REI VRD RFH FKNG CSCGD+W
Sbjct: 660 VCADCHTAIKFITKIVGREITVRDNSRFHHFKNGSCSCGDYW 701
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 203/401 (50%), Gaps = 52/401 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN +I+G A +G +A+ + M K+G T S++L + + V+
Sbjct: 186 MPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNK 245
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G++IHG+ ++ GF VF+GS L+DMYAK + + R F LP K+ + +N++I G +
Sbjct: 246 GKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCV- 304
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
QNG + FR M E + +F SV
Sbjct: 305 ------------------------------QNGEFDRGLGFFRRMLKENVKPMAVSFSSV 334
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ AC L AL G+Q+H I+R DN F+ S+LVDMY KC +IK A VF + +++
Sbjct: 335 IPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDM 394
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+WTA+++G +G + +AV +F NM +G+ P +V+++C++ ++EG ++
Sbjct: 395 VAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNS 454
Query: 301 -----SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN-VRDEVS-WTALVSGYAK 353
+ GL + V++ L G+ G +E+++ + M V+ S W+ L++
Sbjct: 455 MERDFGIAPGLEHYAAVADLL----GRAGRLEEAYDFISNMRGVQPTGSVWSILLAA--- 507
Query: 354 FGKANETIDLFEKMLSHGLKPDE------VTLIGVLSACSR 388
+A+++++L EK+L L D V + + SA R
Sbjct: 508 -CRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQR 547
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 257/687 (37%), Positives = 377/687 (54%), Gaps = 79/687 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D +W +LISGH HG A+ +Y+ +L + +++S ++ C
Sbjct: 37 IPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLS------RNVRPDKFVLLSVAKACAAS 90
Query: 61 G-----RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
G ++IH ++FGF + +G+ L+DM+ K + A
Sbjct: 91 GDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGA------------------- 131
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
R +F M KD +SWT+M + G+ R+ I LFREM L G+ +
Sbjct: 132 ------------RCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSL 179
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
T S+L AC + L G+++H FI+RN+ + NV+V SALV+MY +K A VF +M
Sbjct: 180 TVSSILPACADYIKL--GREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSM 237
Query: 236 AWKNVVSWTAMLVGY-----------------------------------GQNGCSEEAV 260
+++VSW ML Y QNG E A+
Sbjct: 238 YHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELAL 297
Query: 261 KIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFY 320
I C MQ +GI+P+ T+ S + C NL SL G + HG I +T++ ALV Y
Sbjct: 298 GILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLY 357
Query: 321 GKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLI 380
KCG++E S +FN M +D V+W ++ + GK E++ LF KML G++P+ VT I
Sbjct: 358 AKCGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFI 417
Query: 381 GVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF 440
GVLS CS + L ++G F M E+ I P DHY+CM+D+LSRAGRLEEA FI KMP
Sbjct: 418 GVLSGCSHSQLADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPI 477
Query: 441 PPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQL 500
P A W LL +CR++ NVE+G AA L E++P N +YVLLS+I + KW S++
Sbjct: 478 EPTAAAWGALLGACRVYKNVELGTLAASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEI 537
Query: 501 RRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDM 560
R+ MR+KG+ K PG SW++ K++V+ F D S+ D IY L++++ KM +GY P+
Sbjct: 538 RKMMRDKGLAKTPGRSWVQVKNKVYSFVTGDKSNEQKDMIYRFLDEIDEKMRLDGYQPNT 597
Query: 561 SSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKI 620
VL +V+ ++ + L HSE+LA+AFG+L +RV KNLR+C DCHNA K I+KI
Sbjct: 598 DFVLQNVDQEQREETLCSHSERLAVAFGILNSSGKTTVRVFKNLRICGDCHNAIKLIAKI 657
Query: 621 TQREILVRDAVRFHLFKNGECSCGDFW 647
+I+VRD++RFH F++G C+C DFW
Sbjct: 658 VGMQIIVRDSLRFHHFRDGYCTCNDFW 684
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 175/380 (46%), Gaps = 39/380 (10%)
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
+I L G ++ + LF + + D +WT +I+G Q+G ++AID++ + + D
Sbjct: 17 LIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPD 76
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
+F SV AC L K+IH I+ ++ +G+AL+DM+ KCK + A VF
Sbjct: 77 KFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFD 136
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE 293
M K+VVSWT+M Y G + + +F M NGI + T+ S++ +CA+ L
Sbjct: 137 DMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADYIKL-- 194
Query: 294 GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD------------- 340
G + HG L + + VS+ALV Y ++ + +F+ M RD
Sbjct: 195 GREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFL 254
Query: 341 ----------------------EVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVT 378
+ SW A +SG + G+ + + KM G+KP+ +T
Sbjct: 255 NKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRIT 314
Query: 379 LIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
++ L C+ + G+ + + + I + T ++ + ++ G LE ++ N M
Sbjct: 315 IVSALPGCTNLESLRGGKEIHGYVFRHWFIEDV-TITTALVLLYAKCGDLELSRHVFNTM 373
Query: 439 PFPPDAIGWATLLSSCRIHG 458
P D + W T++ + +HG
Sbjct: 374 P-RKDVVAWNTMIMANSMHG 392
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 255/667 (38%), Positives = 391/667 (58%), Gaps = 56/667 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+WN +IS + + +A+ LM+ +G+ +TF+++L S + G++I
Sbjct: 180 DLVTWNSMISSFSQNERFMEALMFLRLMVLEGV-KPDGVTFASVLPACSHLDLLRTGKEI 238
Query: 65 HGHILKFG-FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
H + L+ FVGS LVDMY G + + FD + ++ I ++N
Sbjct: 239 HAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWN----------- 287
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR-LEGLAMDQFTFGSVLT 182
MI G Q+ + +A+ LF EM GL + T S++
Sbjct: 288 --------------------AMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVP 327
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
A + + IH ++I+ + N ++ +AL+DMY + IK ++ +F +M +++VS
Sbjct: 328 AYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVS 387
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQR-------NG---------IEPDDFTLGSVISSCA 286
W ++ Y G S +A+ + MQR +G +P+ TL +V+ CA
Sbjct: 388 WNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCA 447
Query: 287 NLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTA 346
+L++L +G + H ++ L S +TV +ALV Y KCG + + R+F++M +R+ ++W
Sbjct: 448 SLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNV 507
Query: 347 LVSGYAKFGKANETIDLFEKMLSHG-----LKPDEVTLIGVLSACSRAGLVEKGRHYFEI 401
++ Y GK E+++LFE M++ G +KP EVT I + ++CS +G+V++G F
Sbjct: 508 IIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHK 567
Query: 402 MVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIG-WATLLSSCRIHGNV 460
M E+GI P DHY C++D++ RAG++EEA +N MP D +G W++LL +CRI+ N+
Sbjct: 568 MKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNI 627
Query: 461 EIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKY 520
EIG+ AAE+LL+L P + YVLLS+IY+S G WD LRR M+ GV+K+PGCSWI+Y
Sbjct: 628 EIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEY 687
Query: 521 KSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHS 580
VH F A D S P S++++ LE L+ ++ KEGYVPD + VLHD++ EK +L HS
Sbjct: 688 GDEVHKFLAGDLSHPQSEKLHDFLETLSERLKKEGYVPDTACVLHDIDEEEKETILCGHS 747
Query: 581 EKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGE 640
EKLAIAFG+L PPG IRV KNLRVC+DCH A+K+ISKI REI++RDA RFH FK+G
Sbjct: 748 EKLAIAFGILNTPPGTTIRVAKNLRVCNDCHTASKFISKIEDREIILRDARRFHHFKDGT 807
Query: 641 CSCGDFW 647
CSCGD+W
Sbjct: 808 CSCGDYW 814
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 140/479 (29%), Positives = 224/479 (46%), Gaps = 64/479 (13%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD---LG 61
D VSWN +IS A+K + LML +G S T +M + S+ R D LG
Sbjct: 77 DQVSWNSIISALCRFEEWEVAIKAFRLMLMEGF-EPSSFTLVSMALACSNLRKRDGLWLG 135
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+QIHG + G F + L+ MYAKLG + DAK ++++V
Sbjct: 136 KQIHGCCFRKGHWR-TFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLV------------ 182
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
+W +MI+ QN EA+ R M LEG+ D TF SVL
Sbjct: 183 -------------------TWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVL 223
Query: 182 TACGGLLALEEGKQIHAFIIRNDHK-DNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
AC L L GK+IHA+ +R D +N FVGSALVDMYC C ++ VF ++ + +
Sbjct: 224 PACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKI 283
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQ-RNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
W AM+ GY Q+ E+A+ +F M+ G+ + T+ S++ + + HG
Sbjct: 284 GLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHG 343
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ GL + + NAL+ Y + G+I+ S R+F+ M RD VSW +++ Y G++++
Sbjct: 344 YVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSD 403
Query: 360 TIDLFEKML----------------SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
+ L +M KP+ +TL+ VL C+ + KG+ +
Sbjct: 404 ALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKE-----I 458
Query: 404 KEYGIRPIHDHY----TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
Y IR + + ++D+ ++ G L A+ ++MP + I W ++ + +HG
Sbjct: 459 HAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPI-RNVITWNVIIMAYGMHG 516
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 129/474 (27%), Positives = 212/474 (44%), Gaps = 63/474 (13%)
Query: 60 LGRQIHGHILKFGFGSY--VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
LG+QIH H+ KFG+GS+ V + + LV+MY K G + DA + FD + E+
Sbjct: 28 LGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFDRITER----------- 76
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
D +SW ++I+ L + AI FR M +EG FT
Sbjct: 77 --------------------DQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTL 116
Query: 178 GSVLTACGGLL---ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
S+ AC L L GKQIH R H F +AL+ MY K + A+S+
Sbjct: 117 VSMALACSNLRKRDGLWLGKQIHGCCFRKGHW-RTFSNNALMAMYAKLGRLDDAKSLLVL 175
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
+++V+W +M+ + QN EA+ M G++PD T SV+ +C++L L G
Sbjct: 176 FEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTG 235
Query: 295 TQFHGRSLVT-GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK 353
+ H +L T +I V +ALV Y CG +E +F+ + R W A+++GYA+
Sbjct: 236 KEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQ 295
Query: 354 FGKANETIDLFEKM-LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
+ + LF +M + GL + T+ ++ A R + + ++K G+
Sbjct: 296 SEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKR-GLETNR 354
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV--------EIGK 464
+ID+ SR G ++ +K + M D + W T+++S I G E+ +
Sbjct: 355 YLQNALIDMYSRMGDIKTSKRIFDSME-DRDIVSWNTIITSYVICGRSSDALLLLHEMQR 413
Query: 465 WAAESLLELD-------PYNPASYVLLSSIYA-------SKGKWDHVSQLRRTM 504
+S + D P+ P S L++ + +KGK H +R +
Sbjct: 414 IEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLL 467
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 135/274 (49%), Gaps = 16/274 (5%)
Query: 169 GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKD--NVFVGSALVDMYCKCKSIK 226
G + D F F +VL A G+ L GKQIHA + + + +V + + LV+MY KC +
Sbjct: 5 GFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLG 64
Query: 227 YAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCA 286
A VF + ++ VSW +++ + E A+K F M G EP FTL S+ +C+
Sbjct: 65 DAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACS 124
Query: 287 NLAS---LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
NL L G Q HG G + +NAL+ Y K G ++D+ L RD V+
Sbjct: 125 NLRKRDGLWLGKQIHGCCFRKGHWRTFS-NNALMAMYAKLGRLDDAKSLLVLFEDRDLVT 183
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
W +++S +++ + E + M+ G+KPD VT VL ACS L+ G+ +
Sbjct: 184 WNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKE-----I 238
Query: 404 KEYGIRP---IHDHY--TCMIDILSRAGRLEEAK 432
Y +R I + + + ++D+ G++E +
Sbjct: 239 HAYALRTDDVIENSFVGSALVDMYCNCGQVESGR 272
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 10/194 (5%)
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF--ITVSNALVTFYGKC 323
M +G PD+F +V+ + A + L G Q H G SF +T+ N LV YGKC
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60
Query: 324 GNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVL 383
G + D++++F+ + RD+VSW +++S +F + I F ML G +P TL+ +
Sbjct: 61 GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120
Query: 384 SACS----RAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP 439
ACS R GL G+ ++ R ++ ++ + ++ GRL++AKS +
Sbjct: 121 LACSNLRKRDGLW-LGKQIHGCCFRKGHWRTFSNN--ALMAMYAKLGRLDDAKSLLVLFE 177
Query: 440 FPPDAIGWATLLSS 453
D + W +++SS
Sbjct: 178 -DRDLVTWNSMISS 190
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 93/192 (48%), Gaps = 24/192 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLK-------DGLGNLSR--------ITF 45
M D VSWN +I+ + G +DA+ + + M + DG N + IT
Sbjct: 380 MEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITL 439
Query: 46 STMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPE 105
T+L +S + G++IH + ++ S V VGS LVDMYAK G + A+R FD++P
Sbjct: 440 MTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPI 499
Query: 106 KNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDS---------ISWTTMITGLMQNGLER 156
+N++ +N +I G +ES LF M + + +++ + +G+
Sbjct: 500 RNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVD 559
Query: 157 EAIDLFREMRLE 168
E + LF +M+ E
Sbjct: 560 EGLSLFHKMKNE 571
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 251/670 (37%), Positives = 379/670 (56%), Gaps = 63/670 (9%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN +I G++ V +Y ML+ G+ R TF + + ++ GRQ+HGH+
Sbjct: 107 WNTMIRGYSRLDFPQLGVSLYLEMLRRGVKP-DRYTFPFLFKGFTRDIALEYGRQLHGHV 165
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
LK G VFV + LV MY G + A+ FD P+ +++ +N +I+ + G EESR
Sbjct: 166 LKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESR 225
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
RLF M+DK + T T VL+AC L
Sbjct: 226 RLFLVMEDKQVLPTTV-------------------------------TLVLVLSACSKLK 254
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM------AW----- 237
L GK++H+++ + N+ + +A++DMY C + A +FR+M +W
Sbjct: 255 DLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVS 314
Query: 238 --------------------KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFT 277
K+ VSWTAM+ GY ++ +EA+++F NMQ ++PD+FT
Sbjct: 315 GFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFT 374
Query: 278 LGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN 337
+ SV+++CA+L +LE G + + + V NAL+ Y KCG+++ + +F EM+
Sbjct: 375 MVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMS 434
Query: 338 VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH 397
RD+ +WTA++ G A G + +D+F ML + PDE+T IGVLSAC+ GLV+KGR
Sbjct: 435 QRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRK 494
Query: 398 YFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIH 457
YF M ++GI P HY C++D+L+RAGRL+EA I MP ++I W LL+ CR++
Sbjct: 495 YFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVY 554
Query: 458 GNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSW 517
++ + + +LEL+P N A YVLL +IYA+ +W+ + +LR+ M +KG++K PGCS
Sbjct: 555 RESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSL 614
Query: 518 IKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLN 577
I+ RVH F A D S P + I A+L+K+ + + GY PD+S V D+ +K +
Sbjct: 615 IEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVF 674
Query: 578 HHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFK 637
HSEKLAIAFGL+ PPG+ IR+ KNLR+C DCHN K +SK+ RE++VRD RFH FK
Sbjct: 675 RHSEKLAIAFGLINSPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFK 734
Query: 638 NGECSCGDFW 647
+G CSC D+W
Sbjct: 735 HGLCSCKDYW 744
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/395 (30%), Positives = 226/395 (57%), Gaps = 13/395 (3%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL- 60
P D ++WN++IS + G ++ +++ L+++D + T + +L++S+ + DL
Sbjct: 201 PKADVITWNMIISAYNKVGKFEESRRLF-LVMEDK--QVLPTTVTLVLVLSACSKLKDLR 257
Query: 61 -GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G+++H ++ S + + + ++DMYA G + A F + ++I+ + T+++G
Sbjct: 258 TGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFT 317
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
G ++ +R F M +KD +SWT MI G +++ +EA++LFR M+ + D+FT S
Sbjct: 318 NLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVS 377
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VLTAC L ALE G+ I +I RN K+++FV +AL+DMY KC + AES+FR M+ ++
Sbjct: 378 VLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRD 437
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+WTAM+VG NG E+A+ +F NM + I PD+ T V+S+C + +++G ++
Sbjct: 438 KFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFL 497
Query: 300 R-SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKA 357
R + G+ I LV + G +++++ + M ++ + + W AL++G + ++
Sbjct: 498 RMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRES 557
Query: 358 NETIDLFEKMLSHGLKPDE----VTLIGVLSACSR 388
+ + +++L L+PD V L + +AC R
Sbjct: 558 DMAEMVVKQILE--LEPDNGAVYVLLCNIYAACKR 590
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 176/371 (47%), Gaps = 33/371 (8%)
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G + +RRLF + + + W TMI G + + + L+ EM G+ D++TF +
Sbjct: 87 GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLF 146
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+ALE G+Q+H ++++ + NVFV +ALV MY C + A VF +V+
Sbjct: 147 KGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVI 206
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
+W ++ Y + G EE+ ++F M+ + P TL V+S+C+ L L G + H
Sbjct: 207 TWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV 266
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN--- 358
+ S + + NA++ Y CG ++ + +F MN RD +SWT +VSG+ G+ +
Sbjct: 267 KNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVAR 326
Query: 359 ----------------------------ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
E ++LF M + +KPDE T++ VL+AC+ G
Sbjct: 327 NYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLG 386
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATL 450
+E G + + I+ +ID+ + G +++A+S +M D W +
Sbjct: 387 ALELG-EWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMS-QRDKFTWTAM 444
Query: 451 LSSCRIHGNVE 461
+ ++G+ E
Sbjct: 445 IVGLAVNGHGE 455
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 247/644 (38%), Positives = 375/644 (58%), Gaps = 54/644 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +SWN +ISG+ S+G +++Y M+ G+ ++ T ++L+ ++ + LG+ +
Sbjct: 215 DVISWNSMISGYVSNGLTERGLEIYKQMMYLGI-DVDLATIISVLVGCANSGTLSLGKAV 273
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +K F + + L+DMY+K G +
Sbjct: 274 HSLAIKSTFERRINFSNTLLDMYSKCGDL------------------------------- 302
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ + R+F M +++ +SWT+MI G ++G AI L ++M EG+ +D S+L AC
Sbjct: 303 DGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHAC 362
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+L+ GK +H +I N+ + N+FV +AL+DMY KC S+ A SVF TM K+++SW
Sbjct: 363 ARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWN 422
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
M+ ++PD T+ ++ +CA+L++LE G + HG L
Sbjct: 423 TMI---------------------GELKPDSRTMACILPACASLSALERGKEIHGYILRN 461
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G S V+NALV Y KCG + + LF+ + +D VSWT ++SGY G NE I F
Sbjct: 462 GYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATF 521
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+M G++PDEV+ I +L ACS +GL+E+G +F IM ++ I P +HY CM+D+LSR
Sbjct: 522 NEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSR 581
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
G L +A FI +P PDA W LL CRI+ ++E+ + AE + EL+P N YVLL
Sbjct: 582 TGNLSKAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLL 641
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF-SADDWSSPYSDQIYAE 543
++IYA KW+ V ++R + +KG+RK+PGCSWI+ K +V++F S ++ S P+S +I +
Sbjct: 642 ANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESL 701
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
L+K+ RKM +EGY P L + + +K L HSEKLA+AFGLL +PP +RV KN
Sbjct: 702 LKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLALPPRKTVRVTKN 761
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LRVC DCH K++SK T+REI++RD+ RFH FKNG CSC FW
Sbjct: 762 LRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKNGYCSCRGFW 805
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/470 (26%), Positives = 228/470 (48%), Gaps = 46/470 (9%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
+N I G++ +A+++ + K L T+S++L + + + + G+++H I
Sbjct: 69 YNAKILHFCQLGNLENAMELVCMCQK---SELETKTYSSVLQLCAGSKSLTDGKKVHSII 125
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+G LV +YA G + + +R FD + +KN+ ++N M++ + G +ES
Sbjct: 126 KSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESI 185
Query: 129 RLFRGMK--------------------DKDSISWTTMITGLMQNGLEREAIDLFREMRLE 168
LF+ M D+D ISW +MI+G + NGL ++++++M
Sbjct: 186 CLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYL 245
Query: 169 GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYA 228
G+ +D T SVL C L GK +H+ I++ + + + L+DMY KC + A
Sbjct: 246 GIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGA 305
Query: 229 ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL 288
VF M +NVVSWT+M+ GY ++G S+ A+++ M++ G++ D S++ +CA
Sbjct: 306 LRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARS 365
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
SL+ G H + S + V NAL+ Y KCG+++ ++ +F+ M V+D +SW ++
Sbjct: 366 GSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMI 425
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
LKPD T+ +L AC+ +E+G+ +++ G
Sbjct: 426 G---------------------ELKPDSRTMACILPACASLSALERGKEIHGYILRN-GY 463
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
++D+ + G L A+ + +P D + W ++S +HG
Sbjct: 464 SSDRHVANALVDLYVKCGVLGLARLLFDMIP-SKDLVSWTVMISGYGMHG 512
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 257/648 (39%), Positives = 385/648 (59%), Gaps = 39/648 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSWN +I+G + DAVK YN M K GL S + L +S C+ LG+Q
Sbjct: 168 DSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMP-SNFALISALSSCASLGCILLGQQT 226
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG +K G V V + L+ +YA+ +
Sbjct: 227 HGEGIKLGLDMDVSVSNTLLALYAETSRL------------------------------- 255
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLE-REAIDLFREMRLEGLAMDQFTFGSVLTA 183
E +++F M ++D +SW T+I L +G EAI++F EM G + ++ TF ++L
Sbjct: 256 AECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLAT 315
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA-WKNVVS 242
L + QIHA I++ + KD+ + +AL+ Y K ++ E +F M+ ++ VS
Sbjct: 316 VSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVS 375
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL 302
W +M+ GY N +A+ + M + G D FT +V+S+CA +A+LE G + H ++
Sbjct: 376 WNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAI 435
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
L S + + +ALV Y KCG I+ + R FN M VR+ SW +++SGYA+ G + +
Sbjct: 436 RACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALR 495
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL 422
LF +M G PD +T +GVLSACS GLV++G YF+ M + YG+ P +HY+CM+D+L
Sbjct: 496 LFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLL 555
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN---VEIGKWAAESLLELDPYNPA 479
RAG L++ ++FINKMP P+ + W T+L +C GN E+G+ AAE L +DP N
Sbjct: 556 GRAGELDKIENFINKMPIKPNILIWRTVLGAC-CRGNGRKTELGRRAAEMLFNMDPQNAV 614
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+YVLLS++YAS GKW+ +++ RR MRE V+K+ GCSW+ K VH+F A D S P
Sbjct: 615 NYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGL 674
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IYA+L++L++K+ GYVP + L+D+E K ++L++HSEKLA+AF +L GLPIR
Sbjct: 675 IYAKLKELDKKIRDAGYVPQIKFALYDLEPENKEELLSYHSEKLAVAF-VLTRNSGLPIR 733
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
++KNLRVC DCH+A KYISK+ R I++RD+ RFH F++G+CSC D+W
Sbjct: 734 IMKNLRVCGDCHSAFKYISKVVDRSIVLRDSNRFHHFEDGKCSCRDYW 781
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 198/359 (55%), Gaps = 8/359 (2%)
Query: 97 KRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLER 156
K GFD ++ + NT+I +R G +R+LF M D++ ++W +I+G QNG+
Sbjct: 28 KHGFDS----DLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPE 83
Query: 157 EAIDLFREMRLEGLAMDQFTFGSVLTACG-GLLALEEGKQIHAFIIRNDHKD-NVFVGSA 214
+A + +EM EG ++F FGS + AC +L +G+Q+H + IR D V VG+
Sbjct: 84 DACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNG 143
Query: 215 LVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD 274
L++MY KC I +A SVF M K+ VSW +M+ G QN C E+AVK + +M++ G+ P
Sbjct: 144 LINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPS 203
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN 334
+F L S +SSCA+L + G Q HG + GL ++VSN L+ Y + + + ++F+
Sbjct: 204 NFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFS 263
Query: 335 EMNVRDEVSWTALVSGYAKFGKA-NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVE 393
M RD+VSW ++ A G + +E I++F +M+ G P+ VT I +L+ S
Sbjct: 264 WMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLS-TS 322
Query: 394 KGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
K H ++ +Y ++ + ++ ++G +E + ++M D + W +++S
Sbjct: 323 KLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMIS 381
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 134/472 (28%), Positives = 222/472 (47%), Gaps = 56/472 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD- 59
MP +GV+W LISG+ +G DA V M+ +G +R F S+ R C +
Sbjct: 61 MPDRNGVTWACLISGYTQNGMPEDACGVLKEMIFEGFLP-NRFAFG-----SAIRACQES 114
Query: 60 -----LGRQIHGHILKFGFG-SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNT 113
GRQ+HG+ ++ G + V VG+ L++MYAK G I A+ F + +K+ V +N+
Sbjct: 115 MLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNS 174
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
MIT GL QN +A+ + MR GL
Sbjct: 175 MIT-------------------------------GLDQNKCFEDAVKSYNSMRKTGLMPS 203
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
F S L++C L + G+Q H I+ +V V + L+ +Y + + + VF
Sbjct: 204 NFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFS 263
Query: 234 TMAWKNVVSWTAMLVGYGQNGCS-EEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
M ++ VSW ++ +G S EA+++F M R G P+ T +++++ ++L++ +
Sbjct: 264 WMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSK 323
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALVSGY 351
Q H L + + NAL+ YGK G +E+ +F+ M+ RDEVSW +++SGY
Sbjct: 324 LSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGY 383
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
+ +DL M+ G + D T VLSAC+ +E G + V IR
Sbjct: 384 IHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECG-----MEVHACAIRAC 438
Query: 412 HDHY----TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+ + ++D+ S+ GR++ A F N MP + W +++S HG+
Sbjct: 439 LESDVVIGSALVDMYSKCGRIDYASRFFNLMPV-RNLYSWNSMISGYARHGH 489
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + SWN +ISG+A HG ++A++++ M G ITF +L S VD
Sbjct: 469 MPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLP-DHITFVGVLSACSHIGLVDE 527
Query: 61 GRQIHGHILK-FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEK-NIVMYNTMITGL 118
G + + + +G V S +VD+ + G + + +++P K NI+++ T++
Sbjct: 528 GFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGAC 587
Query: 119 LR 120
R
Sbjct: 588 CR 589
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 250/639 (39%), Positives = 367/639 (57%), Gaps = 33/639 (5%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN +I G++SH DA+++Y+ M G+ N T +L S +++G+++HG I
Sbjct: 137 WNAIIRGYSSHNFFGDAIEMYSRMQASGV-NPDGFTLPCVLKACSGVPVLEVGKRVHGQI 195
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+ GF S VFV + LV +YAK G VE++R
Sbjct: 196 FRLGFESDVFVQNGLVALYAKCGR-------------------------------VEQAR 224
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
+F G+ D++ +SWT+MI+G QNGL EA+ +F +MR + D SVL A +
Sbjct: 225 IVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVE 284
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
LE+GK IH +++ + + +L MY KC + A S F M NV+ W AM+
Sbjct: 285 DLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMIS 344
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
GY +NG + EAV +F M I D T+ S I +CA + SL+ T +
Sbjct: 345 GYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRN 404
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
+ V+ AL+ + KCG+++ + +F+ +D V W+A++ GY G+ + IDLF M
Sbjct: 405 DVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMK 464
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
G+ P++VT +G+L+AC+ +GLVE+G F M K YGI H HY C++D+L R+G L
Sbjct: 465 QAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSM-KYYGIEARHQHYACVVDLLGRSGHL 523
Query: 429 EEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIY 488
EA FI MP P W LL +C+I+ +V +G++AAE L LDP+N YV LS++Y
Sbjct: 524 NEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLY 583
Query: 489 ASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLN 548
AS WD V+++R MREKG+ KD G S I+ ++ F D S P +I+ ELE L
Sbjct: 584 ASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELESLE 643
Query: 549 RKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCS 608
R++ + G++P + SVLHD+ EK + L +HSE+LAIA+GL+ PG +R+ KNLR C
Sbjct: 644 RRLKEAGFIPHIESVLHDLNQEEKEETLCNHSERLAIAYGLISTAPGTTLRITKNLRACI 703
Query: 609 DCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+CH+ATK ISK+ REI+VRDA RFH FKNG CSC D+W
Sbjct: 704 NCHSATKLISKLVNREIVVRDANRFHHFKNGVCSCRDYW 742
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 210/414 (50%), Gaps = 36/414 (8%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
FS++L S +R ++ QIH ++ G F+ + V+ +G I A++ FDE P
Sbjct: 74 FSSLLDHSVHKRHLN---QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFP 130
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
E ++ + W +I G + +AI+++
Sbjct: 131 EPSVFL-------------------------------WNAIIRGYSSHNFFGDAIEMYSR 159
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M+ G+ D FT VL AC G+ LE GK++H I R + +VFV + LV +Y KC
Sbjct: 160 MQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGR 219
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
++ A VF + +N+VSWT+M+ GYGQNG EA++IF M++ ++PD L SV+ +
Sbjct: 220 VEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRA 279
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
++ LE+G HG + GL + +L Y KCG + + F++M + + + W
Sbjct: 280 YTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMW 339
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
A++SGYAK G NE + LF++M+S ++ D +T+ + AC++ G ++ + + + K
Sbjct: 340 NAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINK 399
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ + T +ID+ ++ G ++ A+ ++ D + W+ ++ +HG
Sbjct: 400 TEYRNDVFVN-TALIDMFAKCGSVDLAREVFDRT-LDKDVVVWSAMIVGYGLHG 451
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 170/343 (49%), Gaps = 33/343 (9%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW +ISG+ +G +A++++ M + + I ++L + ++ G+ IHG
Sbjct: 236 VSWTSMISGYGQNGLPMEALRIFGQMRQRNV-KPDWIALVSVLRAYTDVEDLEQGKSIHG 294
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++K G + L MYAK G + A+ FD++ N++M+N MI+G + G E
Sbjct: 295 CVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNE 354
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
A+ LF+EM + + D T S + AC
Sbjct: 355 -------------------------------AVGLFQEMISKNIRTDSITVRSAILACAQ 383
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+ +L+ K + +I + +++++VFV +AL+DM+ KC S+ A VF K+VV W+AM
Sbjct: 384 VGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAM 443
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+VGYG +G ++A+ +F M++ G+ P+D T ++++C + +EEG + G+
Sbjct: 444 IVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGI 503
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALV 348
+ +V G+ G++ +++ M + VS W AL+
Sbjct: 504 EARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALL 546
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 245/641 (38%), Positives = 380/641 (59%), Gaps = 22/641 (3%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
SWN +I+ A G A+ ++ M K L + +R TF + SS + G+QIH
Sbjct: 53 SWNSIIADFARSGDSLQALYAFSSMRKLSL-HPNRSTFPCTIKSCSSLYDLCAGKQIHQQ 111
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
FG+GS +FV S L+DMY+K G + DA++ FDE+PE+N+V + +MI+G ++ E+
Sbjct: 112 AFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREA 171
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
LF+ D + E+ G+ +D G V++AC +
Sbjct: 172 VFLFKEFLLVDETD--------------------YDEIVGVGVGVDSVLLGCVISACARV 211
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
+ +H ++ + + VG+ L+D Y KC I + VF M +V SW +++
Sbjct: 212 CVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLI 271
Query: 248 VGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
Y QNG S EA +F +M + G + + TL +V+ +CA+ +L+ G H + + L
Sbjct: 272 AVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMEL 331
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ V ++V Y KCG +E + + F+ + ++ SWT +V+GY G E + +F +
Sbjct: 332 EDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYE 391
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M+ G+KP+ +T + VL+ACS AGL+++G H+F M E+ + P +HY+CM+D+L RAG
Sbjct: 392 MIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAG 451
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
L+EA I +M PD I W +LL +CRIH NVE+G+ +A L +LDP N YVLLS+
Sbjct: 452 YLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSN 511
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IYA G+WD V ++R M+ G+ K PG S +++K RVH+F D P ++IY L++
Sbjct: 512 IYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDE 571
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
LN K+ + GY+P+++SVL+DV++ EK +L HSEKLA+AFG++ PG I+++KNLR+
Sbjct: 572 LNVKLQEVGYMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRI 631
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCH A K ISKI REI++RD+ RFH FK+G CSCGD+W
Sbjct: 632 CGDCHFAIKLISKIVNREIVIRDSKRFHHFKDGLCSCGDYW 672
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 181/362 (50%), Gaps = 24/362 (6%)
Query: 128 RRLFRGMKDKDSI-SWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
R +F DK S+ SW ++I ++G +A+ F MR L ++ TF + +C
Sbjct: 39 RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L L GKQIH + ++FV SAL+DMY KC + A +F + +NVVSWT+M
Sbjct: 99 LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSM 158
Query: 247 LVGYGQNGCSEEAVKIFC-----------NMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
+ GY QN + EAV +F + G+ D LG VIS+CA +
Sbjct: 159 ISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTE 218
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
HG ++ G + V N L+ Y KCG I S ++F+ M D SW +L++ YA+ G
Sbjct: 219 CVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNG 278
Query: 356 KANETIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
+ E LF M+ G ++ + VTL VL AC+ +G ++ G+ + +VK + D+
Sbjct: 279 LSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVK----MELEDN 334
Query: 415 Y---TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL 471
T ++D+ + GR+E A+ +++ + W +++ +HG+ GK A +
Sbjct: 335 LVVGTSIVDMYCKCGRVEMARKAFDRLK-RKNVKSWTVMVAGYGMHGH---GKEAMKVFY 390
Query: 472 EL 473
E+
Sbjct: 391 EM 392
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 180/360 (50%), Gaps = 42/360 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLML------KDGLGNLSRITFSTML---IM 51
+P + VSW +ISG+ + +AV ++ L D + + S +L I
Sbjct: 147 IPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVIS 206
Query: 52 SSSRRCV-DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVM 110
+ +R CV + +HG +K GF + VG+ L+D YAK G I +++ FD + E ++
Sbjct: 207 ACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCS 266
Query: 111 YNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL 170
+N++I + GL E+ LF M + + + +
Sbjct: 267 WNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAV------------------------- 301
Query: 171 AMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAES 230
T +VL AC AL+ GK IH +++ + +DN+ VG+++VDMYCKC ++ A
Sbjct: 302 -----TLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARK 356
Query: 231 VFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS 290
F + KNV SWT M+ GYG +G +EA+K+F M R GI+P+ T SV+++C++
Sbjct: 357 AFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGL 416
Query: 291 LEEGTQ-FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALV 348
L+EG F+ + I + +V G+ G +++++ L EM V+ D + W +L+
Sbjct: 417 LKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLL 476
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 241/602 (40%), Positives = 370/602 (61%), Gaps = 36/602 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNL--SRITFSTMLIMSSSRRCVDLGRQI 64
V WNL++ + G +ND K + L + + ++ T+ +L + R +DLG QI
Sbjct: 311 VLWNLML---VAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQI 367
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +K GF S ++V L+DMY+K G +
Sbjct: 368 HSLSVKTGFESDMYVSGVLIDMYSKYGWL------------------------------- 396
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
E++RR+ +K+KD +SWT+MI G +Q+ ++A+ F+EM+ G+ D S ++ C
Sbjct: 397 EKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGC 456
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G+ A+ +G QIHA I + + +V + +ALV++Y +C I+ A S F M K+ ++
Sbjct: 457 AGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGN 516
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++ G+ Q+G EEA+K+F M ++G++ + FT S +S+ ANLA +++G Q H R + T
Sbjct: 517 GLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKT 576
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G V NAL++ YGKCG+ ED+ F+EM+ R+EVSW +++ ++ G+ E +DLF
Sbjct: 577 GHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLF 636
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
++M G+KP++VT IGVL+ACS GLVE+G YF+ M EYGIRP DHY C+IDI R
Sbjct: 637 DQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGR 696
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG+L+ AK FI +MP DA+ W TLLS+C++H N+E+G++AA+ LLEL+P++ ASYVLL
Sbjct: 697 AGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLL 756
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S+ YA KW + Q+R+ MR++GVRK+PG SWI+ K+ VH F D P ++QIY L
Sbjct: 757 SNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFL 816
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
+N ++ K GY + + HD E + HSEKLA+ FGL+ +PP +P+RV+KNL
Sbjct: 817 AVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNL 876
Query: 605 RV 606
RV
Sbjct: 877 RV 878
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 235/459 (51%), Gaps = 36/459 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V++N LISGHA G A++++ M GL + +T S++L +S +
Sbjct: 204 MPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGL-SPDCVTISSLLAACASLGDLQK 262
Query: 61 GRQIHGHILKFGFGS-YVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G Q+H ++ K G S Y+ GS L+D+Y K G + A F+ N+V++N M+
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGS-LLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAF- 320
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
G + + + F +LF +M+ G+ +QFT+
Sbjct: 321 --GQINDLAKSF----------------------------ELFCQMQAAGIRPNQFTYPC 350
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L C ++ G+QIH+ ++ + +++V L+DMY K ++ A V + K+
Sbjct: 351 ILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKD 410
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VVSWT+M+ GY Q+ C ++A+ F MQ+ GI PD+ L S IS CA + ++ +G Q H
Sbjct: 411 VVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHA 470
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
R V+G +++ NALV Y +CG I ++ F EM ++D ++ LVSG+A+ G E
Sbjct: 471 RIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEE 530
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ +F +M G+K + T + LSA + +++G+ ++K G + +I
Sbjct: 531 ALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKT-GHSFETEVGNALI 589
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ + G E+AK ++M + + W T+++SC HG
Sbjct: 590 SLYGKCGSFEDAKMEFSEMS-ERNEVSWNTIITSCSQHG 627
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 215/447 (48%), Gaps = 43/447 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW ++SG+A +G +A+ +Y M + G+ + S++L + GR I
Sbjct: 107 DNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYV-LSSVLSSCTKAELFAQGRLI 165
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H K GF S +FVG+ ++ +Y LR G
Sbjct: 166 HAQGYKHGFCSEIFVGNAVITLY-------------------------------LRCGSF 194
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ R+F M +D++++ T+I+G Q G A+++F EM+ GL+ D T S+L AC
Sbjct: 195 RLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAAC 254
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L L++G Q+H+++ + + + +L+D+Y KC ++ A +F + NVV W
Sbjct: 255 ASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWN 314
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
MLV +GQ ++ ++FC MQ GI P+ FT ++ +C ++ G Q H S+ T
Sbjct: 315 LMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKT 374
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G S + VS L+ Y K G +E + R+ + +D VSWT++++GY + + + F
Sbjct: 375 GFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAF 434
Query: 365 EKMLSHGLKPDEVTLIGVLSACS-----RAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
++M G+ PD + L +S C+ R GL R Y + I + ++
Sbjct: 435 KEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSI------WNALV 488
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIG 446
++ +R GR+ EA S +M G
Sbjct: 489 NLYARCGRIREAFSSFEEMELKDGITG 515
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 128/462 (27%), Positives = 226/462 (48%), Gaps = 53/462 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGL--GNLSRITFSTMLIMSSSRRCV 58
M S ++G +H D KV +L G L + F+ L R C
Sbjct: 1 MTRRGAASLGRTLAGFLAH---EDPAKVLSLFADKARQHGGLGPLDFACAL-----RACR 52
Query: 59 DLGR------QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYN 112
GR +IH + G G Y VG+ L+D+Y+K GL+ LP
Sbjct: 53 GNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLV---------LP-------- 95
Query: 113 TMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM 172
+RR+F + +D++SW M++G QNGL EA+ L+R+M G+
Sbjct: 96 --------------ARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVP 141
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
+ SVL++C +G+ IHA ++ +FVG+A++ +Y +C S + AE VF
Sbjct: 142 TPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVF 201
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
M ++ V++ ++ G+ Q G E A++IF MQ +G+ PD T+ S++++CA+L L+
Sbjct: 202 CDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQ 261
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
+GTQ H G+ S + +L+ Y KCG++E + +FN + + V W ++ +
Sbjct: 262 KGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFG 321
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
+ ++ +LF +M + G++P++ T +L C+ ++ G + VK G
Sbjct: 322 QINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKT-GFES-- 378
Query: 413 DHYT--CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
D Y +ID+ S+ G LE+A+ + +M D + W ++++
Sbjct: 379 DMYVSGVLIDMYSKYGWLEKARRVL-EMLKEKDVVSWTSMIA 419
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 253/657 (38%), Positives = 382/657 (58%), Gaps = 46/657 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+WN ++S + +A++ M+ +G+ T S++L S + G+++
Sbjct: 262 DLVTWNTVLSSLCQNEQFLEALEYLREMVLEGV-EPDGFTISSVLPACSHLEMLRTGKEL 320
Query: 65 HGHILKFG-FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
H + LK G FVGS LVDMY + R FD + ++ I ++N MIT
Sbjct: 321 HAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMIT------- 373
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQFTFGSVLT 182
G QN + EA+ LF EM GL + T V+
Sbjct: 374 ------------------------GYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVP 409
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
AC A + + IH F+++ + FV +AL+DMY + I A+ +F M +++V+
Sbjct: 410 ACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVT 469
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQ-----------RNGIEPDDFTLGSVISSCANLASL 291
W ++ GY + E+A+ + MQ R ++P+ TL +++ SCA L++L
Sbjct: 470 WNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSAL 529
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
+G + H ++ L + + V +ALV Y KCG ++ S ++F+++ +R+ ++W +V Y
Sbjct: 530 AKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAY 589
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
G + + ID+ M+ G+KP+EVT I V +ACS +G+V +G F M K+YG+ P
Sbjct: 590 GMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPS 649
Query: 412 HDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIG-WATLLSSCRIHGNVEIGKWAAESL 470
DHY C++D+L RAGR++EA IN +P D G W++LL +CRIH N+EIG+ AA++L
Sbjct: 650 SDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNL 709
Query: 471 LELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSAD 530
++L+P + YVLL++IY+S G W +++RR M+ +GVRK+PGCSWI++ VH F A
Sbjct: 710 IQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAG 769
Query: 531 DWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLL 590
D S P S+++ LE L +M KEGY+PD S VLH+VE EK +L HSEKLAIAFG+L
Sbjct: 770 DSSHPQSEKLRGYLETLWERMRKEGYIPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGIL 829
Query: 591 FIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
PG IRV KNLRVC+DCH ATK+ISK+ REI++RD RFH FKNG CSCGD+W
Sbjct: 830 NTSPGTIIRVAKNLRVCNDCHLATKFISKVVDREIILRDVRRFHHFKNGTCSCGDYW 886
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/472 (27%), Positives = 223/472 (47%), Gaps = 49/472 (10%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSS--SRRCVDLGR 62
+ VSWN LIS S A++ + ML + + S S L S+ + +G+
Sbjct: 159 NQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGK 218
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
Q+H + L+ G E N + NT++ + G
Sbjct: 219 QVHAYGLRKG--------------------------------ELNSFIINTLVAMYGKMG 246
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
+ S+ L + +D ++W T+++ L QN EA++ REM LEG+ D FT SVL
Sbjct: 247 KLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLP 306
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
AC L L GK++HA+ ++N D N FVGSALVDMYC CK + VF M + +
Sbjct: 307 ACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIG 366
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRN-GIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
W AM+ GY QN EEA+ +F M+ + G+ + T+ V+ +C + + HG
Sbjct: 367 LWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGF 426
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ GL V NAL+ Y + G I+ + R+F +M RD V+W +++GY + +
Sbjct: 427 VVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDA 486
Query: 361 IDLFEKML-----------SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
+ + KM LKP+ +TL+ +L +C+ + KG+ +K
Sbjct: 487 LLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT 546
Query: 410 PIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+ + ++D+ ++ G L+ ++ +++P + I W ++ + +HGN +
Sbjct: 547 DVAVG-SALVDMYAKCGCLQMSRKVFDQIPI-RNVITWNVIVMAYGMHGNSQ 596
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 131/457 (28%), Positives = 208/457 (45%), Gaps = 45/457 (9%)
Query: 4 HDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQ 63
H W L+ + +AV Y M+ G+ F +L + + +DLG+Q
Sbjct: 56 HSPEWWIDLLRSKVRSNLLREAVLTYIDMIVLGI-KPDNFAFPALLKAVADLQDMDLGKQ 114
Query: 64 IHGHILKFGFG-SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
IH H+ KFG+G V V + LV++Y K G + FD + E+N V +N++I+ L
Sbjct: 115 IHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFE 174
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
E + FR M D+D + FT SV
Sbjct: 175 KWEMALEAFRCMLDED-------------------------------VEPSSFTLVSVAL 203
Query: 183 ACGGLLALE---EGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
AC E GKQ+HA+ +R N F+ + LV MY K + ++ + + ++
Sbjct: 204 ACSNFPMPEGLLMGKQVHAYGLRKGEL-NSFIINTLVAMYGKMGKLASSKVLLGSFEGRD 262
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+V+W +L QN EA++ M G+EPD FT+ SV+ +C++L L G + H
Sbjct: 263 LVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHA 322
Query: 300 RSLVTGLI---SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
+L G + SF V +ALV Y C + R+F+ M R W A+++GYA+
Sbjct: 323 YALKNGSLDENSF--VGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEY 380
Query: 357 ANETIDLFEKM-LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
E + LF +M S GL + T+ GV+ AC R+G K +VK G+
Sbjct: 381 DEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKR-GLDRDRFVQ 439
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
++D+ SR G+++ AK KM D + W T+++
Sbjct: 440 NALMDMYSRLGKIDIAKRIFGKME-DRDLVTWNTIIT 475
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 116/238 (48%), Gaps = 14/238 (5%)
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL 302
W +L ++ EAV + +M GI+PD+F +++ + A+L ++ G Q H
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120
Query: 303 VTGL-ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
G + +TV+N LV Y KCG+ +++F+ ++ R++VSW +L+S F K +
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVE---KGRHYFEIMVKEYGIRPIHDH---Y 415
+ F ML ++P TL+ V ACS + E G+ V YG+R +
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQ-----VHAYGLRKGELNSFII 235
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS-CRIHGNVEIGKWAAESLLE 472
++ + + G+L +K + D + W T+LSS C+ +E ++ E +LE
Sbjct: 236 NTLVAMYGKMGKLASSKVLLGSFE-GRDLVTWNTVLSSLCQNEQFLEALEYLREMVLE 292
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 41/206 (19%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLML---KDGLGNLSR-------ITFSTMLI 50
M D V+WN +I+G+ DA+ + + M + SR IT T+L
Sbjct: 462 MEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILP 521
Query: 51 MSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVM 110
++ + G++IH + +K + V VGS LVDMYAK G + +++ FD++P +N+
Sbjct: 522 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNV-- 579
Query: 111 YNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL 170
I+W ++ +G ++AID+ R M ++G+
Sbjct: 580 -----------------------------ITWNVIVMAYGMHGNSQDAIDMLRMMMVQGV 610
Query: 171 AMDQFTFGSVLTACGGLLALEEGKQI 196
++ TF SV AC + EG +I
Sbjct: 611 KPNEVTFISVFAACSHSGMVNEGLKI 636
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 251/642 (39%), Positives = 382/642 (59%), Gaps = 40/642 (6%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V W LLIS + +AV+++ L+DG R T S+M+ + V LG Q+H
Sbjct: 220 VVWTLLISRYVQGECAEEAVEIFLDFLEDGF-EPDRYTMSSMISACTELGSVRLGLQLHS 278
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
L+ GF S V LVDMYAK NI ++
Sbjct: 279 LALRMGFASDACVSCGLVDMYAK----------------SNI------------EQAMDY 310
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGL-EREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
+ ++F M+ D ISWT +I+G +Q+G+ E + + LF EM E + + T+ S+L AC
Sbjct: 311 ANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACA 370
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
+ + G+Q+HA +I+++ VG+ALV MY + ++ A VF + ++++S
Sbjct: 371 NISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIS--- 427
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
+ G++ + + R + T S+IS+ A++ L +G Q H +L G
Sbjct: 428 -CITEGRDAPLDHRIG------RMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAG 480
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
S VSN+LV+ Y +CG +ED+ R FNE+ R+ +SWT+++SG AK G A + LF
Sbjct: 481 FGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFH 540
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
M+ G+KP++VT I VLSACS GLV +G+ YF M +++G+ P +HY CM+D+L+R+
Sbjct: 541 DMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARS 600
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
G ++EA FIN+MP DA+ W TLL +CR H N+E+G+ AA++++EL+P +PA YVLLS
Sbjct: 601 GLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAPYVLLS 660
Query: 486 SIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELE 545
++YA G WD V+++R MR+ + K+ G SW++ ++ H F A D S P + IY +L+
Sbjct: 661 NLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLD 720
Query: 546 KLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
L ++ GYVPD S VLHD+ K + L HSEK+A+AFGL+ PIR+ KNLR
Sbjct: 721 TLVGEIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLR 780
Query: 606 VCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VC+DCH+A KY+SK T+REI++RD+ RFH K+GECSCG++W
Sbjct: 781 VCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 116/348 (33%), Positives = 186/348 (53%), Gaps = 16/348 (4%)
Query: 102 ELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKD-KDSISWTTMITGLMQNGLEREAID 160
+L +++ V+ N+++T R G V +R +F GM+ +D +SWT M + L +NG ERE++
Sbjct: 78 DLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERESLL 137
Query: 161 LFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHK-----DNVFVGSAL 215
L EM GL + +T +V AC E + ++ HK ++ VGSAL
Sbjct: 138 LIGEMLESGLLPNAYTLCAVAHAC---FPHELYCLVGGVVLGLVHKMGLWGTDIAVGSAL 194
Query: 216 VDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDD 275
+DM + + A VF + K VV WT ++ Y Q C+EEAV+IF + +G EPD
Sbjct: 195 IDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDR 254
Query: 276 FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIED----SHR 331
+T+ S+IS+C L S+ G Q H +L G S VS LV Y K NIE +++
Sbjct: 255 YTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAK-SNIEQAMDYANK 313
Query: 332 LFNEMNVRDEVSWTALVSGYAKFG-KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
+F M D +SWTAL+SGY + G + N+ + LF +ML+ +KP+ +T +L AC+
Sbjct: 314 VFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANIS 373
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
+ GR ++K H ++ + + +G +EEA+ N++
Sbjct: 374 DHDSGRQVHAHVIKS-NQAAAHTVGNALVSMYAESGCMEEARRVFNQL 420
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 141/316 (44%), Gaps = 76/316 (24%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKV-YNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
M +D +SW LISG+ G + V V + ML + + + IT+S++L ++ D
Sbjct: 318 MRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESI-KPNHITYSSILKACANISDHD 376
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIV---------- 109
GRQ+H H++K + VG+ LV MYA+ G + +A+R F++L E++++
Sbjct: 377 SGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMISCITEGRDAP 436
Query: 110 ---------------MYNTMITGLLRRGLVEESRRL------------------------ 130
+ ++I+ G++ + ++L
Sbjct: 437 LDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYS 496
Query: 131 -----------FRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
F +KD++ ISWT+MI+GL ++G A+ LF +M L G+ + T+ +
Sbjct: 497 RCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIA 556
Query: 180 VLTACGGLLALEEGKQI-------HAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
VL+AC + + EGK+ H I R +H + +VD+ + +K A
Sbjct: 557 VLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHY------ACMVDLLARSGLVKEALEFI 610
Query: 233 RTMAWK-NVVSWTAML 247
M K + + W +L
Sbjct: 611 NEMPLKADALVWKTLL 626
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 261/626 (41%), Positives = 368/626 (58%), Gaps = 49/626 (7%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDE------------------ 102
G H H+LK G GS FV + ++DMYA+LG I A++ FDE
Sbjct: 114 GIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGY 173
Query: 103 ---------------LPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMIT 147
+PE+N++ + M+TG + +E +RR F M ++ +SW M++
Sbjct: 174 WKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLS 233
Query: 148 GLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKD 207
G QNGL EA+ LF EM G+ D+ T+ +V++AC + A ++R H+
Sbjct: 234 GYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSS----RGDPCLAASLVRTLHQK 289
Query: 208 ----NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIF 263
N FV +AL+DMY K + A +F TM +NVV+W +M+ GY QNG S A+++F
Sbjct: 290 RIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELF 349
Query: 264 CNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF-ITVSNALVTFYG 321
M + PD+ T+ SVIS+C +L +LE G + R L I I+ NA++ Y
Sbjct: 350 KEMITAKKLTPDEVTMVSVISACGHLGALELG-NWVVRFLTENQIKLSISGHNAMIFMYS 408
Query: 322 KCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIG 381
+CG++ED+ R+F EM RD VS+ L+SG+A G E I+L M G++PD VT IG
Sbjct: 409 RCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIG 468
Query: 382 VLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFP 441
VL+ACS AGL+E+GR FE +K+ P DHY CM+D+L R G LE+AK + +MP
Sbjct: 469 VLTACSHAGLLEEGRKVFE-SIKD----PAIDHYACMVDLLGRVGELEDAKRTMERMPME 523
Query: 442 PDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLR 501
P A + +LL++ RIH VE+G+ AA L EL+P N +++LLS+IYAS G+W V ++R
Sbjct: 524 PHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIR 583
Query: 502 RTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMS 561
M++ GV+K G SW++Y ++H F D S SD IY L +L +KM + GY+ D S
Sbjct: 584 EAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKS 643
Query: 562 SVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKIT 621
VL DVE EK +++ HSEKLAI + LL G IRVVKNLRVC DCH A K ISK+
Sbjct: 644 CVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLE 703
Query: 622 QREILVRDAVRFHLFKNGECSCGDFW 647
R I+VRD RFH F +G CSC D+W
Sbjct: 704 GRVIIVRDNNRFHCFNDGLCSCKDYW 729
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 182/400 (45%), Gaps = 82/400 (20%)
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
LF + + +T+M+ + + ++ +M+ G+ D F + ++ + G
Sbjct: 56 LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAG---- 111
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF-------RTMA------ 236
G HA +++ H + FV +A++DMY + I +A VF R +A
Sbjct: 112 -TGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMV 170
Query: 237 ---WK-----------------NVVSWT-------------------------------A 245
WK NV++WT A
Sbjct: 171 SGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNA 230
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
ML GY QNG +EEA+++F M GIEPD+ T +VIS+C++ G SLV
Sbjct: 231 MLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSS-----RGDPCLAASLVRT 285
Query: 306 L----ISF-ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
L I V AL+ Y K G+++ + +LFN M R+ V+W ++++GYA+ G++
Sbjct: 286 LHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMA 345
Query: 361 IDLFEKMLS-HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
I+LF++M++ L PDEVT++ V+SAC G +E G + + I H MI
Sbjct: 346 IELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGH-NAMI 404
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+ SR G +E+AK +M D + + TL+S HG+
Sbjct: 405 FMYSRCGSMEDAKRVFQEMA-TRDVVSYNTLISGFAAHGH 443
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 194/436 (44%), Gaps = 81/436 (18%)
Query: 1 MPFHDGVSWNLLI-------------------------------SGHASHGSVNDAVKVY 29
MP + ++W ++ SG+A +G +A++++
Sbjct: 189 MPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLF 248
Query: 30 NLMLKDGLGNLSRITFSTMLIMSSSR----RCVDLGRQIHGHILKFGFGSYVFVGSPLVD 85
+ M+ G+ T+ T++ SSR L R +H ++ FV + L+D
Sbjct: 249 DEMVNAGI-EPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLN----CFVRTALLD 303
Query: 86 MYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTM 145
MYAK G + A++ F+ +P +N+V +N+M
Sbjct: 304 MYAKFGDLDSARKLFNTMPGRNVVTWNSM------------------------------- 332
Query: 146 ITGLMQNGLEREAIDLFREM-RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRND 204
I G QNG AI+LF+EM + L D+ T SV++ACG L ALE G + F+ N
Sbjct: 333 IAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQ 392
Query: 205 HKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFC 264
K ++ +A++ MY +C S++ A+ VF+ MA ++VVS+ ++ G+ +G EA+ +
Sbjct: 393 IKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMS 452
Query: 265 NMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCG 324
M+ GIEPD T V+++C++ LEEG + S+ I +V G+ G
Sbjct: 453 TMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVF-ESIKDPAIDHYA---CMVDLLGRVG 508
Query: 325 NIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDE----VTLI 380
+ED+ R M + + ++ K E +L L L+PD + L
Sbjct: 509 ELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFE-LEPDNSGNFILLS 567
Query: 381 GVLSACSRAGLVEKGR 396
+ ++ R VE+ R
Sbjct: 568 NIYASAGRWKDVERIR 583
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 151/405 (37%), Gaps = 127/405 (31%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRND-HKDNVFVGSALVDMYCKCKSIK-YAESVFRT 234
GS+ + G L +Q+HA II N H N +V + L++ + ++ Y +F +
Sbjct: 4 LGSIASRVGNFNHL---RQLHAQIIHNSLHHHNYWV-ALLINHCTRLRAPPHYTHLLFNS 59
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
NV +T+ML Y + V ++ MQ G+ PD F +I S G
Sbjct: 60 TLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGT-----GG 114
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNE------------------- 335
FH L G S V NA++ Y + G I + ++F+E
Sbjct: 115 IGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYW 174
Query: 336 --------------MNVRDEVSWTALVSGYAKF--------------------------- 354
M R+ ++WTA+V+GYAK
Sbjct: 175 KWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSG 234
Query: 355 ----GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP 410
G A E + LF++M++ G++PDE T + V+SACS G + + +R
Sbjct: 235 YAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRG---------DPCLAASLVRT 285
Query: 411 IHDH--------YTCMIDILSRAGRLEEAKSFINKMP----------------------- 439
+H T ++D+ ++ G L+ A+ N MP
Sbjct: 286 LHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMA 345
Query: 440 ------------FPPDAIGWATLLSSCRIHGNVEIGKWAAESLLE 472
PD + +++S+C G +E+G W L E
Sbjct: 346 IELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTE 390
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/641 (37%), Positives = 376/641 (58%), Gaps = 32/641 (4%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW ++IS +A +G + A+++++ M G+ S + + ++L ++LG+QIH
Sbjct: 154 VSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAV-YMSLLQSCLGPSFLELGKQIHS 212
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
H+++ + + V + + +MY +R G +E
Sbjct: 213 HVIRAQLNANITVETAICNMY-------------------------------VRCGWLEG 241
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
++ +F GM +++++WT ++ G Q A++LF M +EG+ +D+F F VL C G
Sbjct: 242 AKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCG 301
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L + G+QIH+ I++ + V VG+ LVD Y KC I+ A F ++ N VSW+A+
Sbjct: 302 LEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSAL 361
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ G+ Q+G E+ +KIF +++ G+ + F SV +CA A+L G+Q HG ++ GL
Sbjct: 362 ISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGL 421
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+S++ +A+VT Y KCG ++ + R F ++ D V+WTA++SGYA G A E + F +
Sbjct: 422 VSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRR 481
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M S+G++P+ VT I VL+ACS +GLV + + Y M ++YG++P DHY CMID SRAG
Sbjct: 482 MQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAG 541
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
L+EA IN+MPF PDA+ W +LL C H ++++GK AAE+L LDP + A Y+LL +
Sbjct: 542 LLQEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFN 601
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
+Y++ GKW+ +R+ M E+ ++K+ CSWI K +VH F D P ++ IY++LE+
Sbjct: 602 LYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRFVVGDRHHPQTEAIYSKLEE 661
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
+I LS + + L HSEKLAIAFGL+ PI V KNLR
Sbjct: 662 FKCSVIDSPVRLLNEEDDVSCSLSARKEQLLDHSEKLAIAFGLISTEDNAPILVFKNLRA 721
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCH K +S +T R+I+VRD+ RFH FK+G+CSC D+W
Sbjct: 722 CRDCHEFGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCNDYW 762
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 199/410 (48%), Gaps = 39/410 (9%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR IH + + + + L+ MY G D ++ FDE+ KN+V
Sbjct: 106 GRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLV----------- 154
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SW +I+ +NG +AI LF +M+ G+ + + S+
Sbjct: 155 --------------------SWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSL 194
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L +C G LE GKQIH+ +IR N+ V +A+ +MY +C ++ A+ VF M +N
Sbjct: 195 LQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNA 254
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+WT ++VGY Q E A+++F M G+E D+F V+ C L + G Q H
Sbjct: 255 VTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSH 314
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ G S ++V LV FY KCG+IE ++R F ++ ++VSW+AL+SG+++ G+ +
Sbjct: 315 IVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDC 374
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
I +F + S G+ + V AC+ + G +K + ++ + M+
Sbjct: 375 IKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGE-SAMVT 433
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL 470
+ S+ GRL+ A+ + PDA+ W ++S HGN AAE+L
Sbjct: 434 MYSKCGRLDYARRAFESID-EPDAVAWTAIISGYAYHGN------AAEAL 476
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 168/352 (47%), Gaps = 34/352 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + V+W L+ G+ + A++++ M +G+ L FS +L + D+
Sbjct: 249 MDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGV-ELDEFVFSIVLKVCCGLEDWDM 307
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQIH HI+K G S V VG+PLVD Y K G I A R F + E N V ++ +I+G +
Sbjct: 308 GRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQ 367
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G +E + I +F +R EG+ ++ F + SV
Sbjct: 368 SGRLE-------------------------------DCIKIFTSLRSEGVVLNSFIYTSV 396
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
AC L G Q H I+ ++ SA+V MY KC + YA F ++ +
Sbjct: 397 FQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDA 456
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+WTA++ GY +G + EA+ F MQ G+ P+ T +V+++C++ + E Q+ G
Sbjct: 457 VAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGS 516
Query: 301 -SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
S G+ I + ++ Y + G ++++ L N M D +SW +L+ G
Sbjct: 517 MSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGG 568
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 157/316 (49%), Gaps = 2/316 (0%)
Query: 146 ITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH 205
+ L + G +EA D +EM +++ ++ + ACG L +L +G+ IH + R
Sbjct: 59 LVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVK 118
Query: 206 KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCN 265
+ + + L+ MYC C S + VF M KN+VSW ++ Y +NG E+A+++F +
Sbjct: 119 NPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSD 178
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
MQ +GI P+ S++ SC + LE G Q H + L + ITV A+ Y +CG
Sbjct: 179 MQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGW 238
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+E + +F+ M+ ++ V+WT L+ GY + K ++LF +M G++ DE VL
Sbjct: 239 LEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKV 298
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
C + GR +VK G T ++D + G +E A ++ P D +
Sbjct: 299 CCGLEDWDMGRQIHSHIVK-LGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPND-V 356
Query: 446 GWATLLSSCRIHGNVE 461
W+ L+S G +E
Sbjct: 357 SWSALISGFSQSGRLE 372
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/602 (38%), Positives = 362/602 (60%), Gaps = 32/602 (5%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
+ +++ + R +D R IH H+ F VF+ + L+ +Y K G + DA
Sbjct: 67 YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADA-------- 118
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
RR+F GM +D SWT++I G QN + EA+ L
Sbjct: 119 -----------------------RRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPG 155
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M + FTF S+L A G + G+QIHA ++ D D+V+VGSAL+DMY +C
Sbjct: 156 MLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGR 215
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A +VF + KN VSW A++ G+ + G E + +F MQRNG E FT SV S+
Sbjct: 216 MDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSA 275
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
A + +LE+G H + +G V N ++ Y K G++ D+ ++F+ ++ +D V+W
Sbjct: 276 IAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTW 335
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
++++ +A++G E + FE+M G+ +++T + +L+ACS GLV++G+ YF++M K
Sbjct: 336 NSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMM-K 394
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
EY + P DHY ++D+L RAG L +A FI KMP P A W LL SCR+H N +IG+
Sbjct: 395 EYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQ 454
Query: 465 WAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRV 524
+AA+ + ELDP + VLL +IYAS G+WD +++R+ M+ GV+K+P CSW++ ++ V
Sbjct: 455 FAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSV 514
Query: 525 HIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLA 584
H+F A+D + P S++IY + E+++ ++ K GYVP+ VL V+ E+ L +HSEK+A
Sbjct: 515 HMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIA 574
Query: 585 IAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCG 644
+AF L+ +P G IR++KN+R+C DCH+A +YISK+ +REI+VRD RFH F +G CSCG
Sbjct: 575 LAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTNRFHHFSSGSCSCG 634
Query: 645 DF 646
D+
Sbjct: 635 DY 636
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 186/378 (49%), Gaps = 35/378 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SW LI+G+A + ++A+ + ML+ G + TF+++L + + +
Sbjct: 125 MPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLR-GRFKPNGFTFASLLKAAGASASSGI 183
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G QIH +K+ + V+VGS L+DMYA+ G + A FD+L KN V +N +I G R
Sbjct: 184 GEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFAR 243
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+G E TT++ +F EM+ G FT+ SV
Sbjct: 244 KGDGE-----------------TTLL--------------MFAEMQRNGFEATHFTYSSV 272
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+A G+ ALE+GK +HA +I++ + + FVG+ ++DMY K S+ A VF + K+V
Sbjct: 273 FSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDV 332
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+W +ML + Q G EAV F M++ G+ + T S++++C++ ++EG Q+
Sbjct: 333 VTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDM 392
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKANE 359
L I +V G+ G + D+ +M ++ + W AL+ G + K N
Sbjct: 393 MKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALL-GSCRMHK-NA 450
Query: 360 TIDLFEKMLSHGLKPDEV 377
I F L PD+
Sbjct: 451 KIGQFAADHVFELDPDDT 468
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 164/313 (52%), Gaps = 5/313 (1%)
Query: 146 ITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH 205
+ G+ R+ +D + LA + S++TAC +L++ + IHA + +
Sbjct: 39 VPAAASTGIIRDTLD---SVDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQF 95
Query: 206 KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCN 265
+VF+ ++L+ +YCKC ++ A VF M +++ SWT+++ GY QN +EA+ +
Sbjct: 96 AGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPG 155
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M R +P+ FT S++ + AS G Q H ++ + V +AL+ Y +CG
Sbjct: 156 MLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGR 215
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
++ + +F+++ ++ VSW AL++G+A+ G T+ +F +M +G + T V SA
Sbjct: 216 MDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSA 275
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
+ G +E+G+ M+K G R ++D+ +++G + +A+ +++ D +
Sbjct: 276 IAGIGALEQGKWVHAHMIKS-GERLSAFVGNTILDMYAKSGSMIDARKVFDRVD-KKDVV 333
Query: 446 GWATLLSSCRIHG 458
W ++L++ +G
Sbjct: 334 TWNSMLTAFAQYG 346
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 245/640 (38%), Positives = 376/640 (58%), Gaps = 32/640 (5%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
++N++I G A S ++A+ ++ M + + + + TFS++L S + + G Q+H
Sbjct: 88 AYNVMIRGLAFKRSPDNALLLFKKMHEKSVQH-DKFTFSSVLKACSRMKALREGEQVHAL 146
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
ILK GF S FV + L+ MYA G I A+ FD
Sbjct: 147 ILKSGFKSNEFVENTLIQMYANCGQIGVARHVFD-------------------------- 180
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
GM ++ ++W +M++G +NGL E + LFR++ + D T SVL ACG L
Sbjct: 181 -----GMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRL 235
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
LE G+ I +I+ + N + ++L+DMY KC + A +F M ++VV+W+AM+
Sbjct: 236 ANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMI 295
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
GY Q +EA+ +F MQ+ + P++ T+ SV+ SCA L + E G H +
Sbjct: 296 SGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMK 355
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
+T+ L+ FY KCG I+ S +F EM+ ++ +WTAL+ G A G+ ++ F M
Sbjct: 356 LTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSM 415
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
L + +KP++VT IGVLSACS A LV++GRH F M +++ I P +HY CM+DIL RAG
Sbjct: 416 LENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGF 475
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSI 487
LEEA FI+ MPFPP+A+ W TLL+SCR H N+E+ + + E + L+P + Y+LLS+
Sbjct: 476 LEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNT 535
Query: 488 YASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKL 547
YA G+ + ++R ++EK ++K PGCS I+ VH F ++D +S +I+ L+K+
Sbjct: 536 YALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKM 595
Query: 548 NRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVC 607
+++ + GYVP+ + E K ++HHSEKLAIA+GL+ P IR+ KNLR+C
Sbjct: 596 MKQIKRLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMC 655
Query: 608 SDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
DCHNATK+IS++ +R I+VRD RFH FK+G CSC D+W
Sbjct: 656 RDCHNATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 695
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 121/364 (33%), Positives = 200/364 (54%), Gaps = 12/364 (3%)
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
LL ++ + +F + +S ++ MI GL A+ LF++M + + D+F
Sbjct: 63 AALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKF 122
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
TF SVL AC + AL EG+Q+HA I+++ K N FV + L+ MY C I A VF M
Sbjct: 123 TFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGM 182
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
+++V+W +ML GY +NG +E VK+F + IE DD T+ SV+ +C LA+LE G
Sbjct: 183 PERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGE 242
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
+ GL T++ +L+ Y KCG ++ + +LF+EM+ RD V+W+A++SGYA+
Sbjct: 243 LIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQAD 302
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR--HYFEIMVKEYGIRPIHD 413
+ E ++LF +M + P+EVT++ VL +C+ G E G+ H++ +K+ ++
Sbjct: 303 RCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFY---IKKKKMKLTVT 359
Query: 414 HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE---SL 470
T +ID ++ G ++ + +M F + W L+ +G GK A E S+
Sbjct: 360 LGTQLIDFYAKCGYIDRSVEVFKEMSF-KNVFTWTALIQGLANNGE---GKMALEFFSSM 415
Query: 471 LELD 474
LE D
Sbjct: 416 LEND 419
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 188/377 (49%), Gaps = 48/377 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRC--- 57
MP V+WN ++SG+ +G ++ VK++ +L+ RI F + ++S C
Sbjct: 182 MPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILE------LRIEFDDVTMISVLMACGRL 235
Query: 58 --VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
+++G I +I+ G + + L+DMYAK G + A++ FDE+ ++++V ++ MI
Sbjct: 236 ANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMI 295
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
+G Q +EA++LF EM+ + ++
Sbjct: 296 -------------------------------SGYAQADRCKEALNLFHEMQKGNVYPNEV 324
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
T SVL +C L A E GK +H +I + K V +G+ L+D Y KC I + VF+ M
Sbjct: 325 TMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEM 384
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
++KNV +WTA++ G NG + A++ F +M N ++P+D T V+S+C++ +++G
Sbjct: 385 SFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGR 444
Query: 296 Q-FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALVSGYAK 353
F+ + I +V G+ G +E++++ + M + V W L++
Sbjct: 445 HLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLAS--- 501
Query: 354 FGKANETIDLFEKMLSH 370
+A++ I++ EK L H
Sbjct: 502 -CRAHKNIEMAEKSLEH 517
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 248/647 (38%), Positives = 378/647 (58%), Gaps = 37/647 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V+W L+I+ G +A++ + M+ G + + T S++ + + LG+Q+H
Sbjct: 235 VTWTLMITRCMQMGFPREAIRFFLDMVLSGFES-DKFTLSSVFSACAELENLSLGKQLHS 293
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++ G V LVDMYAK G V++
Sbjct: 294 WAIRSGLVDDV--ECSLVDMYAKCSA----------------------------DGSVDD 323
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQN-GLEREAIDLFREMRLEG-LAMDQFTFGSVLTAC 184
R++F M+D +SWT +ITG M+N L EAI+LF EM +G + + FTF S AC
Sbjct: 324 CRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC 383
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G L GKQ+ + N V ++++ M+ K ++ A+ F +++ KN+VS+
Sbjct: 384 GNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYN 443
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
L G +N E+A K+ + + FT S++S AN+ S+ +G Q H + +
Sbjct: 444 TFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKL 503
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
GL V NAL++ Y KCG+I+ + R+FN M R+ +SWT++++G+AK G A ++ F
Sbjct: 504 GLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETF 563
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+M+ G+KP+EVT + +LSACS GLV +G +F M +++ I+P +HY CM+D+L R
Sbjct: 564 NQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCR 623
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG L +A FIN MPF D + W T L +CR+H N E+GK AA +LELDP PA+Y+ L
Sbjct: 624 AGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQL 683
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S+IYA GKW+ +++RR M+E+ + K+ GCSWI+ ++H F D + P + QIY EL
Sbjct: 684 SNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDEL 743
Query: 545 EKLNRKMIKEGYVPDMSSVLHDV----ELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
++L ++ + GYVPD VLH + + +EK ++L HSEK+A+AFGL+ P+RV
Sbjct: 744 DRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRV 803
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCHNA KYIS ++ REI++RD RFH FK+G+CSC D+W
Sbjct: 804 FKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 136/461 (29%), Positives = 221/461 (47%), Gaps = 43/461 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW+ +++ + ++G DA+KV+ L+ GL + ++ ++ S+ V +GR
Sbjct: 130 DVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP-NDYCYTAVIRACSNSDFVGVGRVT 188
Query: 65 HGHILKFG-FGSYVFVGSPLVDMYAK-LGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
G ++K G F S V VG L+DM+ K +A + FD++ E N+V
Sbjct: 189 LGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVV------------- 235
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
+WT MIT MQ G REAI F +M L G D+FT SV +
Sbjct: 236 ------------------TWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFS 277
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK---SIKYAESVFRTMAWKN 239
AC L L GKQ+H++ IR+ D+ V +LVDMY KC S+ VF M +
Sbjct: 278 ACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHS 335
Query: 240 VVSWTAMLVGYGQN-GCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQF 297
V+SWTA++ GY +N + EA+ +F M G +EP+ FT S +C NL+ G Q
Sbjct: 336 VMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQV 395
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
G++ GL S +V+N++++ + K +ED+ R F ++ ++ VS+ + G +
Sbjct: 396 LGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF 455
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
+ L ++ L T +LS + G + KG +VK G+
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVK-LGLSCNQPVCNA 514
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+I + S+ G ++ A N M + I W ++++ HG
Sbjct: 515 LISMYSKCGSIDTASRVFNFME-NRNVISWTSMITGFAKHG 554
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 219/455 (48%), Gaps = 46/455 (10%)
Query: 12 LISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKF 71
LI H + G + AV +LM +DG+ + +TFS++L R LG+ +H +++F
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 72 GFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLF 131
E + V+YN++I+ + G ++ +F
Sbjct: 92 DI-------------------------------EPDSVLYNSLISLYSKSGDSAKAEDVF 120
Query: 132 RGMK---DKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
M+ +D +SW+ M+ NG E +AI +F E GL + + + +V+ AC
Sbjct: 121 ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSD 180
Query: 189 ALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCK-SIKYAESVFRTMAWKNVVSWTAM 246
+ G+ F+++ H + +V VG +L+DM+ K + S + A VF M+ NVV+WT M
Sbjct: 181 FVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLM 240
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ Q G EA++ F +M +G E D FTL SV S+CA L +L G Q H ++ +GL
Sbjct: 241 ITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL 300
Query: 307 ISFITVSNALVTFYGKC---GNIEDSHRLFNEMNVRDEVSWTALVSGYAK-FGKANETID 362
+ + S LV Y KC G+++D ++F+ M +SWTAL++GY K A E I+
Sbjct: 301 VDDVECS--LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAIN 358
Query: 363 LFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
LF +M++ G ++P+ T AC G+ K G+ +I +
Sbjct: 359 LFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR-GLASNSSVANSVISM 417
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLS-SCR 455
++ R+E+A+ + + + + T L +CR
Sbjct: 418 FVKSDRMEDAQRAFESLS-EKNLVSYNTFLDGTCR 451
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/475 (22%), Positives = 206/475 (43%), Gaps = 76/475 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSV-NDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
M H +SW LI+G+ + ++ +A+ +++ M+ G + TFS+ +
Sbjct: 331 MEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPR 390
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+G+Q+ G K G S N + N++I+ +
Sbjct: 391 VGKQVLGQAFKRGLAS-------------------------------NSSVANSVISMFV 419
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ +E+++R F + +K+ +S+ T + G +N +A L E+ L + FTF S
Sbjct: 420 KSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFAS 479
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L+ + ++ +G+QIH+ +++ N V +AL+ MY KC SI A VF M +N
Sbjct: 480 LLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRN 539
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
V+SWT+M+ G+ ++G + ++ F M G++P++ T +++S+C+++ + EG +
Sbjct: 540 VISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFN 599
Query: 300 R------------------------SLVTGLISFITV----SNALV--TFYGKC---GNI 326
L+T FI ++ LV TF G C N
Sbjct: 600 SMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNT 659
Query: 327 E---DSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVL 383
E + R E++ + ++ L + YA GK E+ ++ KM L +
Sbjct: 660 ELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKE-------- 711
Query: 384 SACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
CS + +K ++ I+D +I + R G + + ++K+
Sbjct: 712 GGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKL 766
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 252/655 (38%), Positives = 382/655 (58%), Gaps = 49/655 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSR--RCVDLGR 62
D VSWN LI+G+ GS ++ +++ ML+ GL NL+ + L S ++ G+
Sbjct: 185 DSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGL-NLNSYALGSALKACGSNFSSSIECGK 243
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
+HG +K G V VG+ L+D YAK+G + DA +
Sbjct: 244 MLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATK------------------------ 279
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQ-----NGLEREAIDLFREMRLEGLAMDQFTF 177
+F+ M D + + + MI G +Q + EA+ LF EM+ G+ +FTF
Sbjct: 280 -------IFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTF 332
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
S+L AC + A E GKQIHA I + + + + F+G+ALV++Y SI+ F +
Sbjct: 333 SSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPK 392
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
+VVSWT+++VG+ QNG E + +F + +G +PD+FT+ ++S+CANLA+++ G Q
Sbjct: 393 LDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQI 452
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H ++ TG+ +F + N+ + Y KCG+I+ ++ F E D VSW+ ++S A+ G A
Sbjct: 453 HAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCA 512
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
E +DLFE M G+ P+ +T +GVL ACS GLVE+G YFEIM K++GI P H C
Sbjct: 513 KEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSAC 572
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
++D+L RAGRL EA+SFI F D + W +LLS+CR+H + GK AE ++EL+P
Sbjct: 573 IVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEA 632
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
ASYVLL +IY G +++R M+++GV+K+PG SWI+ + VH F A D S P S
Sbjct: 633 AASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNS 692
Query: 538 DQIYAELEKLNRKM-----IKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFI 592
IY +LE++ ++ I E V D S H + M+++HSEKLA+ FG++ +
Sbjct: 693 QVIYVQLEEMLEEIKKLDYIDEKLVSDASEPKH-----KDNSMVSYHSEKLAVTFGIISL 747
Query: 593 PPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
P P+RV+KNLR C CH K S++ REI++RD +RFH F++G CSCGD+W
Sbjct: 748 PRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDGSCSCGDYW 802
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 142/467 (30%), Positives = 224/467 (47%), Gaps = 45/467 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSWN LISG+ G ++ + ++ L L + TFS L + + L
Sbjct: 80 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDL-RLDKFTFSNALSVCGRTLDLRL 138
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR IH I G G V + + L+DMY K G I A+ F+ E + V +N++I G +R
Sbjct: 139 GRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVR 198
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G +E RL L + +R GL ++ + GS
Sbjct: 199 IGSNDEMLRL------------------------------LVKMLR-HGLNLNSYALGSA 227
Query: 181 LTACGGLL--ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
L ACG ++E GK +H ++ +V VG+AL+D Y K ++ A +F+ M
Sbjct: 228 LKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDP 287
Query: 239 NVVSWTAMLVGYGQ-----NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE 293
NVV + AM+ G+ Q + + EA+ +F MQ G++P +FT S++ +C+ + + E
Sbjct: 288 NVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFEC 347
Query: 294 GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK 353
G Q H + L S + NALV Y G+IED + F+ D VSWT+L+ G+ +
Sbjct: 348 GKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQ 407
Query: 354 FGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR--HYFEIMVKEYGIRPI 411
G+ + LF ++L G KPDE T+ +LSAC+ V+ G H + I I
Sbjct: 408 NGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTII 467
Query: 412 HDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ CM ++ G ++ A + K PD + W+ ++SS HG
Sbjct: 468 QNSQICM---YAKCGDIDSA-NMTFKETKNPDIVSWSVMISSNAQHG 510
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 215/431 (49%), Gaps = 40/431 (9%)
Query: 40 LSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRG 99
L +T++ ++ S+ + G+ H H++K F +F+ + L+ MY K G AK+
Sbjct: 17 LDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKL 76
Query: 100 FDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAI 159
FD +P+ ++ +SW ++I+G Q G E +
Sbjct: 77 FDRMPK-------------------------------RNVVSWNSLISGYTQMGFYHEVM 105
Query: 160 DLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMY 219
+LF+E R+ L +D+FTF + L+ CG L L G+ IHA I + V + ++L+DMY
Sbjct: 106 NLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMY 165
Query: 220 CKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLG 279
CKC I +A VF + + VSW +++ GY + G ++E +++ M R+G+ + + LG
Sbjct: 166 CKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALG 225
Query: 280 SVISSCAN--LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN 337
S + +C + +S+E G HG ++ GL + V AL+ Y K G++ED+ ++F M
Sbjct: 226 SALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMP 285
Query: 338 VRDEVSWTALVSGYAKFGK-----ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLV 392
+ V + A+++G+ + ANE + LF +M S G+KP E T +L ACS
Sbjct: 286 DPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAF 345
Query: 393 EKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
E G+ + K Y ++ ++++ S +G +E+ + P D + W +L+
Sbjct: 346 ECGKQIHAQIFK-YNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTP-KLDVVSWTSLIV 403
Query: 453 SCRIHGNVEIG 463
+G E G
Sbjct: 404 GHVQNGQFEGG 414
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 134/275 (48%), Gaps = 3/275 (1%)
Query: 169 GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYA 228
GL +D T+ ++ +L GK H +I+ K +F+ + L+ MYCKC A
Sbjct: 14 GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVA 73
Query: 229 ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL 288
+ +F M +NVVSW +++ GY Q G E + +F + + + D FT + +S C
Sbjct: 74 KKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRT 133
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
L G H V+GL + ++N+L+ Y KCG I+ + +F + D VSW +L+
Sbjct: 134 LDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLI 193
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR--AGLVEKGRHYFEIMVKEY 406
+GY + G +E + L KML HGL + L L AC + +E G+ VK
Sbjct: 194 AGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVK-L 252
Query: 407 GIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFP 441
G+ T ++D ++ G LE+A MP P
Sbjct: 253 GLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDP 287
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 252/655 (38%), Positives = 382/655 (58%), Gaps = 49/655 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSR--RCVDLGR 62
D VSWN LI+G+ GS ++ +++ ML+ GL NL+ + L S ++ G+
Sbjct: 106 DSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGL-NLNSYALGSALKACGSNFSSSIECGK 164
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
+HG +K G V VG+ L+D YAK+G + DA +
Sbjct: 165 MLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATK------------------------ 200
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQ-----NGLEREAIDLFREMRLEGLAMDQFTF 177
+F+ M D + + + MI G +Q + EA+ LF EM+ G+ +FTF
Sbjct: 201 -------IFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTF 253
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
S+L AC + A E GKQIHA I + + + + F+G+ALV++Y SI+ F +
Sbjct: 254 SSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPK 313
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
+VVSWT+++VG+ QNG E + +F + +G +PD+FT+ ++S+CANLA+++ G Q
Sbjct: 314 LDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQI 373
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H ++ TG+ +F + N+ + Y KCG+I+ ++ F E D VSW+ ++S A+ G A
Sbjct: 374 HAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCA 433
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
E +DLFE M G+ P+ +T +GVL ACS GLVE+G YFEIM K++GI P H C
Sbjct: 434 KEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSAC 493
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
++D+L RAGRL EA+SFI F D + W +LLS+CR+H + GK AE ++EL+P
Sbjct: 494 IVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEA 553
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
ASYVLL +IY G +++R M+++GV+K+PG SWI+ + VH F A D S P S
Sbjct: 554 AASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNS 613
Query: 538 DQIYAELEKLNRKM-----IKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFI 592
IY +LE++ ++ I E V D S H + M+++HSEKLA+ FG++ +
Sbjct: 614 QVIYVQLEEMLEEIKKLDYIDEKLVSDASEPKH-----KDNSMVSYHSEKLAVTFGIISL 668
Query: 593 PPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
P P+RV+KNLR C CH K S++ REI++RD +RFH F++G CSCGD+W
Sbjct: 669 PRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDGSCSCGDYW 723
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 142/467 (30%), Positives = 224/467 (47%), Gaps = 45/467 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSWN LISG+ G ++ + ++ L L + TFS L + + L
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDL-RLDKFTFSNALSVCGRTLDLRL 59
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR IH I G G V + + L+DMY K G I A+ F+ E + V +N++I G +R
Sbjct: 60 GRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVR 119
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G +E RL L + +R GL ++ + GS
Sbjct: 120 IGSNDEMLRL------------------------------LVKMLR-HGLNLNSYALGSA 148
Query: 181 LTACGGLL--ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
L ACG ++E GK +H ++ +V VG+AL+D Y K ++ A +F+ M
Sbjct: 149 LKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDP 208
Query: 239 NVVSWTAMLVGYGQ-----NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE 293
NVV + AM+ G+ Q + + EA+ +F MQ G++P +FT S++ +C+ + + E
Sbjct: 209 NVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFEC 268
Query: 294 GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK 353
G Q H + L S + NALV Y G+IED + F+ D VSWT+L+ G+ +
Sbjct: 269 GKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQ 328
Query: 354 FGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR--HYFEIMVKEYGIRPI 411
G+ + LF ++L G KPDE T+ +LSAC+ V+ G H + I I
Sbjct: 329 NGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTII 388
Query: 412 HDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ CM ++ G ++ A + K PD + W+ ++SS HG
Sbjct: 389 QNSQICM---YAKCGDIDSA-NMTFKETKNPDIVSWSVMISSNAQHG 431
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 180/337 (53%), Gaps = 9/337 (2%)
Query: 134 MKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEG 193
M ++ +SW ++I+G Q G E ++LF+E R+ L +D+FTF + L+ CG L L G
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60
Query: 194 KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQN 253
+ IHA I + V + ++L+DMYCKC I +A VF + + VSW +++ GY +
Sbjct: 61 RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN--LASLEEGTQFHGRSLVTGLISFIT 311
G ++E +++ M R+G+ + + LGS + +C + +S+E G HG ++ GL +
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVV 180
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK-----ANETIDLFEK 366
V AL+ Y K G++ED+ ++F M + V + A+++G+ + ANE + LF +
Sbjct: 181 VGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFE 240
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M S G+KP E T +L ACS E G+ + K Y ++ ++++ S +G
Sbjct: 241 MQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFK-YNLQSDEFIGNALVELYSLSG 299
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
+E+ + P D + W +L+ +G E G
Sbjct: 300 SIEDGLKCFHSTP-KLDVVSWTSLIVGHVQNGQFEGG 335
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 253/640 (39%), Positives = 365/640 (57%), Gaps = 41/640 (6%)
Query: 49 LIMSSSRRCV--DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEK 106
L+ S+ + C L R +H + G FV S L+ Y +LG A+ FD +PEK
Sbjct: 22 LLPSALKSCPAQPLARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVFDRMPEK 81
Query: 107 NIVMYNTMITGLLRRGLVEESRRLFRGMK----DKDSISWTTMITGLMQNGLEREAIDLF 162
N+V ++ +I G RG E + L M+ + + I+W +++GL ++G +A+
Sbjct: 82 NVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTAL 141
Query: 163 REMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC 222
M EG D L+A G + + GKQ+H ++++ + + V +AL+DMY KC
Sbjct: 142 VRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKC 201
Query: 223 -----------------------------KSIKYAESV--FRTMAWK----NVVSWTAML 247
++ + +E++ FR + NVVSWT+++
Sbjct: 202 GRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIV 261
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
QNG EAV +F MQ G+EP+ T+ V+ + AN+A+L G H SL G +
Sbjct: 262 ACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFL 321
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
+ V +ALV Y KCG + +F+ M R+ VSW A++ GYA G A + LF M
Sbjct: 322 HDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSM 381
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
KPD VT VL ACS+AGL E+GR YF M + +GI P +HY CM+ +L R+G+
Sbjct: 382 QKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGK 441
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSI 487
L+EA IN+MPF PD+ W +LL SCR++GNV + + AAE L +L+P N +YVLLS+I
Sbjct: 442 LDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLEPGNAGNYVLLSNI 501
Query: 488 YASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKL 547
YASK WD V+++R M+ G++K+ GCSWI+ K++VH+ A D S P I +L +L
Sbjct: 502 YASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKNKVHMLLAGDNSHPMMTAITEKLNQL 561
Query: 548 NRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVC 607
+M + G+ P VLHDVE EK +L HSEKLA+A GL+ PG P+RV+KNLR+C
Sbjct: 562 TIEMNRLGFAPSRDFVLHDVEEQEKDNILAVHSEKLAVALGLISTRPGTPLRVIKNLRIC 621
Query: 608 SDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
DCH A K+IS QREI VRD RFH FK+G+CSCGD+W
Sbjct: 622 GDCHEAMKFISSFEQREISVRDTNRFHHFKDGKCSCGDYW 661
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 182/356 (51%), Gaps = 7/356 (1%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
++WN L+SG G DAV M +G S L + V +G+Q+HG
Sbjct: 119 ITWNGLVSGLNRSGRALDAVTALVRMHSEGFFP-DATGVSCALSAVGDVKEVSVGKQVHG 177
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+++K G V + L+DMY K G + R F E ++ N ++ GL R V E
Sbjct: 178 YVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSE 237
Query: 127 SRRLFRGM----KDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
+ LFR + + +SWT+++ +QNG + EA+DLFR M+ G+ + T VL
Sbjct: 238 ALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLP 297
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
A + AL G+ H F +R +V+VGSALVDMY KC ++A ++F M +NVVS
Sbjct: 298 AFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVS 357
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHGRS 301
W AM+ GY +G + AV++FC+MQ+ +PD T V+ +C+ EEG + F+
Sbjct: 358 WNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQ 417
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGK 356
G+ + +VT G+ G +++++ L NEM D W +L+ +G
Sbjct: 418 QGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGN 473
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 157/373 (42%), Gaps = 83/373 (22%)
Query: 161 LFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYC 220
L+ +R D S L +C A + +HA + + ++ FV S+L+ Y
Sbjct: 7 LYHFLRHVSFPPDPHLLPSALKSCP---AQPLARALHAAAVVSGLAEDPFVASSLLHSYI 63
Query: 221 KCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGS 280
+ + A SVF M KNVV W+A++ GY G +E A + M+ G+EP+ T
Sbjct: 64 RLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNG 123
Query: 281 VIS------------------------------SCA-----NLASLEEGTQFHGRSLVTG 305
++S SCA ++ + G Q HG + G
Sbjct: 124 LVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAG 183
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNE---MNVR----------------------- 339
V AL+ YGKCG ++ R+F+E M+V
Sbjct: 184 CRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFR 243
Query: 340 ---------DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
+ VSWT++V+ + G+ E +DLF M S G++P+ VT+ VL A +
Sbjct: 244 EFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVA 303
Query: 391 LVEKGR--HYFEIMVKEYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIG 446
+ GR H F + K + +HD Y + ++D+ ++ G+ A++ + MP + +
Sbjct: 304 ALMHGRSAHCFSLR-KGF----LHDVYVGSALVDMYAKCGKARHARTIFDAMP-SRNVVS 357
Query: 447 WATLLSSCRIHGN 459
W ++ +HG+
Sbjct: 358 WNAMIGGYAMHGD 370
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 233/544 (42%), Positives = 340/544 (62%), Gaps = 1/544 (0%)
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
E ++ + N+ + GL+ ++RRLF M D+D ++W +IT +QN EA+ LF
Sbjct: 239 ESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGR 298
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
++ +G+ + TF +L L +L +GK IH + + +V V +AL+ +Y +C++
Sbjct: 299 LQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEA 358
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
A +F M K+V++WT M V Y QNG +EA+++F MQ G P TL +V+ +
Sbjct: 359 PGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDT 418
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
CA+LA+L++G Q H + G + V AL+ YGKCG + ++ +F +M RD + W
Sbjct: 419 CAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVW 478
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
+++ YA+ G +ET+ LF +M G K D V+ + VLSA S +G V G YF M++
Sbjct: 479 NSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQ 538
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP-FPPDAIGWATLLSSCRIHGNVEIG 463
++ I P + Y C++D+L RAGR++EA + K+ PD I W TLL +CR H +
Sbjct: 539 DFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQA 598
Query: 464 KWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSR 523
K AAE +LE DP + +YV+LS++YA+ G WD V+++R+ MR +GV+K+PG S I+ +R
Sbjct: 599 KAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNR 658
Query: 524 VHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKL 583
VH F D S P IYAEL+ LN +M GY+PD +LHDVE K ML +HSE+L
Sbjct: 659 VHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERL 718
Query: 584 AIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSC 643
AIAFGL+ PPG P+RV+KNLRVCSDCH ATKYISK+ REILVRD RFH FK+G CSC
Sbjct: 719 AIAFGLMSTPPGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSC 778
Query: 644 GDFW 647
D+W
Sbjct: 779 KDYW 782
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 224/454 (49%), Gaps = 34/454 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +W +I + G + A+ ++ M ++ + +++T+ +L +S + G +I
Sbjct: 70 DVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMP-TKVTYVAILNACASTESLKDGMEI 128
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG IL+ GF VFVG+ L++MY K G + RG
Sbjct: 129 HGQILQQGFEGDVFVGTALINMYNKCGSV---------------------------RGAW 161
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ +RL + +D +SWT MI +Q+ A L+R M+L+G+ ++ T +V A
Sbjct: 162 DSFKRL----EHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAY 217
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G L EGK I++ + + +V V ++ ++M+ + A +F M ++VV+W
Sbjct: 218 GDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWN 277
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++ Y QN EAV++F +Q++GI+ +D T +++ +L SL +G H
Sbjct: 278 IVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEA 337
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G + V+ AL++ YG+C + ++F +M +D ++WT + YA+ G E + LF
Sbjct: 338 GYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLF 397
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
++M G +P TL+ VL C+ ++KGR ++ E G R T +I++ +
Sbjct: 398 QEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHII-ENGFRMEMVVETALINMYGK 456
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
G++ EA+S KM D + W ++L + HG
Sbjct: 457 CGKMAEARSVFEKMA-KRDILVWNSMLGAYAQHG 489
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 186/365 (50%), Gaps = 36/365 (9%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
F +L SS + VD GR++H H+ GF V L+ MYA+ G
Sbjct: 8 FVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGS------------ 55
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
V E++++F ++ KD +WT MI Q G A+ +F +
Sbjct: 56 -------------------VPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQ 96
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M+ E + + T+ ++L AC +L++G +IH I++ + +VFVG+AL++MY KC S
Sbjct: 97 MQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGS 156
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
++ A F+ + ++VVSWTAM+ Q+ A ++ MQ +G+ P+ TL +V ++
Sbjct: 157 VRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNA 216
Query: 285 CANLASLEEGTQFHGRSLVTGLI--SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
+ L EG + SLV+ + S + V N+ + +G G + D+ RLF +M RD V
Sbjct: 217 YGDPHYLSEGKFIY--SLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVV 274
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
+W +++ Y + E + LF ++ G+K +++T + +L+ + + KG+ E +
Sbjct: 275 TWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHE-L 333
Query: 403 VKEYG 407
VKE G
Sbjct: 334 VKEAG 338
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 164/353 (46%), Gaps = 27/353 (7%)
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
D F ++L C ++ G+++H + + N V L+ MY +C S+ A+ VF
Sbjct: 4 DTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVF 63
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
+ K+V +WT M+ Y Q G + A+ +F MQ + P T +++++CA+ SL+
Sbjct: 64 EILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLK 123
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
+G + HG+ L G + V AL+ Y KCG++ + F + RD VSWTA+++
Sbjct: 124 DGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACV 183
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM---VKEYGIR 409
+ + L+ +M G+ P+++TL V +A + +G+ + ++ V E +R
Sbjct: 184 QHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVR 243
Query: 410 PIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS----------SCRIHGN 459
++ +++ AG L +A+ M D + W +++ + R+ G
Sbjct: 244 VMNS----AMNMFGNAGLLGDARRLFEDM-VDRDVVTWNIVITFYVQNENFGEAVRLFGR 298
Query: 460 VEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKD 512
++ A N ++VL+ ++Y S + ++E G +D
Sbjct: 299 LQQDGIKA---------NDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRD 342
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 91/169 (53%), Gaps = 5/169 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D ++W ++ +A +G +A++++ M +G S T +L + +
Sbjct: 369 MGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTS-ATLVAVLDTCAHLAALQK 427
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQIH HI++ GF + V + L++MY K G + +A+ F+++ +++I+++N+M+ +
Sbjct: 428 GRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQ 487
Query: 121 RGLVEESRRLFRGMK----DKDSISWTTMITGLMQNGLEREAIDLFREM 165
G +E+ +LF M+ D++S+ ++++ L +G + F M
Sbjct: 488 HGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAM 536
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/228 (18%), Positives = 108/228 (47%), Gaps = 4/228 (1%)
Query: 272 EPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHR 331
+PD +++ C++ +++ G + H G V L+ Y +CG++ ++ +
Sbjct: 2 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61
Query: 332 LFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGL 391
+F + +D +WT ++ Y + G + + +F +M + P +VT + +L+AC+
Sbjct: 62 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 121
Query: 392 VEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
++ G ++++ G T +I++ ++ G + A ++ D + W ++
Sbjct: 122 LKDGMEIHGQILQQ-GFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEH-RDVVSWTAMI 179
Query: 452 SSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQ 499
++C H + +W ++LD P + + L +++ + G ++S+
Sbjct: 180 AACVQHDQFALARWLYRR-MQLDGVVP-NKITLYTVFNAYGDPHYLSE 225
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 245/643 (38%), Positives = 374/643 (58%), Gaps = 32/643 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+W ++S ++ + + +++++ M + + L+ +++L + V LG+ I
Sbjct: 596 DAVAWTAMVSCYSENDCPENTLQIFSKM-RVAVSKLNPFALTSVLRAAVCLSSVVLGKGI 654
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +K + + V L+DMYAK G I DA+ F+ M+T
Sbjct: 655 HACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFE------------MVT-------- 694
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ D I W+ MI+ Q +A +LF M ++ ++F+ SVL AC
Sbjct: 695 -----------NDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQAC 743
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+ L+ GKQIH I+ H+ +FVG+AL+D+Y KC ++ + +F ++ N VSW
Sbjct: 744 ANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWN 803
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++VGY ++G E A+ +F M+ + T SV+ +CA+ AS+ Q H +
Sbjct: 804 TIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKS 863
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
S VSN+L+ Y KCG I D+ +F + D VSW A++SGYA G+A +LF
Sbjct: 864 TFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELF 923
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+ M + +K +++T + +LS C GLV +G F+ M ++GI P +HYTC++ +L R
Sbjct: 924 DMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGR 983
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AGRL +A +FI +P P A+ W LLSSC +H NVE+G+++AE +LE++P + +YVLL
Sbjct: 984 AGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGRFSAEKVLEIEPQDETTYVLL 1043
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S++Y++ G D V+ R++MR GVRK+PG SW++ K VH FS P I A L
Sbjct: 1044 SNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSWVEIKGEVHAFSVGSEDHPCMRVINAML 1103
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
E LN K I+EGYVPD VLHD+E +K++ML HSE+LA+A+GL+ PPG PIR++KNL
Sbjct: 1104 EWLNLKAIREGYVPDTDEVLHDLEEEQKVRMLWVHSERLALAYGLVMTPPGHPIRIMKNL 1163
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R C DCH K ISKI ++EI+VRD RFH F+ G CSCGD+W
Sbjct: 1164 RSCLDCHAIFKVISKIVKQEIIVRDINRFHHFEEGTCSCGDYW 1206
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 136/511 (26%), Positives = 241/511 (47%), Gaps = 45/511 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + VS+ L+ GHA G +A ++ + +G +++ +T+L + + + L
Sbjct: 491 LPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEG-HEVNQFVLTTVLKLVVAMDTLGL 549
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+H K G FVGS L+D Y+ G++ DA
Sbjct: 550 AWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDA------------------------ 585
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
RR+F G+ KD+++WT M++ +N + +F +MR+ ++ F SV
Sbjct: 586 -------RRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSV 638
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A L ++ GK IHA ++ + V AL+DMY KC +I+ A F + +V
Sbjct: 639 LRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDV 698
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+ W+ M+ Y Q +E+A ++F M R+ + P++F+L SV+ +CAN+ L+ G Q H
Sbjct: 699 ILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNH 758
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ G S + V NAL+ Y KC ++E S +F+ + +EVSW ++ GY+K G
Sbjct: 759 AIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAA 818
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSAC-SRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ +F +M + + +VT VL AC S A + G+ + I + I + +I
Sbjct: 819 LSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSN--SLI 876
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP- 478
D ++ G + +A+ + D + W ++S +HG + A+ L ++ N
Sbjct: 877 DSYAKCGCIRDAREIFETLK-ECDLVSWNAIISGYAVHGQAAM----AQELFDMMSKNSI 931
Query: 479 ----ASYVLLSSIYASKGKWDHVSQLRRTMR 505
++V L S+ S G L +MR
Sbjct: 932 KANDITFVALLSVCGSTGLVSQGLSLFDSMR 962
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 127/462 (27%), Positives = 214/462 (46%), Gaps = 50/462 (10%)
Query: 61 GRQIHGHILKFGFGSYV--FVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
GR +HGH+++ G + + F + L++MY K+G A R FD LPE+N+V + T++ G
Sbjct: 447 GRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGH 506
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
RG E EA LF+ +R EG ++QF
Sbjct: 507 ALRGEFE-------------------------------EASALFQRLRWEGHEVNQFVLT 535
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
+VL + L +HA + H N FVGSAL+D Y C + A VF + K
Sbjct: 536 TVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGK 595
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+ V+WTAM+ Y +N C E ++IF M+ + + F L SV+ + L+S+ G H
Sbjct: 596 DAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIH 655
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
S+ T + V AL+ Y KCGNIED+ F + D + W+ ++S YA+ +
Sbjct: 656 ACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNE 715
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--- 415
+ +LF +M+ + P+E +L VL AC+ L++ G+ + + I+ H+
Sbjct: 716 QAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQ-----IHNHAIKIGHESELFV 770
Query: 416 -TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
+ID+ ++ +E + + + + + W T++ G G+ A E+
Sbjct: 771 GNALIDLYAKCSDMESSLEIFSSL-RDVNEVSWNTIIVGYSKSG---FGEAALSVFREMR 826
Query: 475 PYN-PASYVLLSSIY---ASKGKWDHVSQLRRTMREKGVRKD 512
+ P++ V SS+ AS +HV Q+ + + D
Sbjct: 827 AASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSD 868
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 153/344 (44%), Gaps = 16/344 (4%)
Query: 113 TMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM 172
++ G++RR SRRL ++ + LE E L +
Sbjct: 375 AVVAGMIRR----LSRRLHSAFFNQAPPRRRDLAANAALQWLEDELTSL----AFPWPGV 426
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRND--HKDNVFVGSALVDMYCKCKSIKYAES 230
D + + +L C G+ +H ++R+ + ++F + L++MY K A
Sbjct: 427 DSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHR 486
Query: 231 VFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS 290
VF + +N+VS+ ++ G+ G EEA +F ++ G E + F L +V+ + +
Sbjct: 487 VFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDT 546
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
L H + G V +AL+ Y CG + D+ R+F+ + +D V+WTA+VS
Sbjct: 547 LGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSC 606
Query: 351 YAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA--CSRAGLVEKGRHYFEIMVKEYGI 408
Y++ T+ +F KM K + L VL A C + ++ KG H +
Sbjct: 607 YSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTE 666
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
R + Y ++D+ ++ G +E+A+ +M D I W+ ++S
Sbjct: 667 RHV---YGALLDMYAKCGNIEDAR-LAFEMVTNDDVILWSLMIS 706
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 258/644 (40%), Positives = 369/644 (57%), Gaps = 36/644 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V+W LISG + A+ + M +D + + TF + S+ + G+QIHG
Sbjct: 74 VTWTSLISGCVHNRRFLPALLHFTNMRRDNV-QPNDFTFPCVFKASAFVQIPMTGKQIHG 132
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
LK G VFVG DMY K G DA FDE+P++N+
Sbjct: 133 LALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLA----------------- 175
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+W I+ +Q+ +AI F+E + TF + L AC
Sbjct: 176 --------------TWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVD 221
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF-RTMAWKNVVSWTA 245
++ L G+Q+HAFI+R +K++V V + L+D Y KC I AE VF R KNVVSW +
Sbjct: 222 MVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCS 281
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
ML QN E A +F R +EP DF + SV+S+CA L LE G H ++
Sbjct: 282 MLAALVQNHEEERACMVFLQ-ARKEVEPTDFMISSVLSACAELGGLELGRSVHALAVKAC 340
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
+ I V +ALV YGKCG+IE++ ++F+E+ R+ V+W A++ GYA G + + LFE
Sbjct: 341 VEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFE 400
Query: 366 KML--SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
+M SHG++P VTLI +LS CSR G VE+G FE M YGI P +H+ C++D+L
Sbjct: 401 EMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLG 460
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
R+G ++ A FI M P W LL +CR+HG E+GK AAE L ELD + ++V+
Sbjct: 461 RSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVV 520
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LS++ AS G+W+ + +R+ M++ G++K+ G SWI K+R+H+F A D S + +I A
Sbjct: 521 LSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHDRNSEIQAM 580
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
L KL M + GYVPD + L D+E EK + +HSEK+A+AFGL+ +P G+PIR+ KN
Sbjct: 581 LGKLRGGMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPQGVPIRITKN 640
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LR+C DCH+A K+IS+I REI+VRD RFH FK+G CSC D+W
Sbjct: 641 LRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 684
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 127/263 (48%), Gaps = 4/263 (1%)
Query: 193 GKQIHAFIIRNDHKDNV--FVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGY 250
G+ IHA IIR H + F+ + LV+MY K + A+ V + VV+WT+++ G
Sbjct: 25 GRTIHAHIIRT-HVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGC 83
Query: 251 GQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFI 310
N A+ F NM+R+ ++P+DFT V + A + G Q HG +L G+I +
Sbjct: 84 VHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDV 143
Query: 311 TVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH 370
V + Y K G D+ +F+EM R+ +W A +S + ++ + I F++ L
Sbjct: 144 FVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCV 203
Query: 371 GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEE 430
+P+ +T L+AC + GR +V+ G + +ID + G +
Sbjct: 204 HGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVR-CGYKEDVSVANGLIDFYGKCGDIVS 262
Query: 431 AKSFINKMPFPPDAIGWATLLSS 453
A+ N++ + + W ++L++
Sbjct: 263 AEMVFNRIGNRKNVVSWCSMLAA 285
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 252/663 (38%), Positives = 383/663 (57%), Gaps = 17/663 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + +W +LISG A GS ++ M G ++ T S++L S + L
Sbjct: 350 IPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKG-ACPNQYTLSSVLKCCSLDNNLQL 408
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +H +L+ G V +G+ ++D+Y K + A+R F+ + E ++V +N MI LR
Sbjct: 409 GKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLR 468
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G VE+S +FR + KD +SW T++ GL+Q G ER A++ M G TF
Sbjct: 469 AGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIA 528
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW--- 237
L L +E G+Q+H +++ + F+ S+LV+MYCKC + A + R +
Sbjct: 529 LILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVL 588
Query: 238 -------------KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+VSW +M+ GY NG E+ +K F M R + D T+ ++IS+
Sbjct: 589 RKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISA 648
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
CAN LE G H G V ++L+ Y K G+++D+ +F + N + V W
Sbjct: 649 CANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMW 708
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
T+++SGYA G+ I LFE+ML+ G+ P+EVT +GVL+ACS AGL+E+G YF +M
Sbjct: 709 TSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKD 768
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
Y I P +H T M+D+ RAG L + K+FI K W + LSSCR+H NVE+GK
Sbjct: 769 AYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHLTSVWKSFLSSCRLHKNVEMGK 828
Query: 465 WAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRV 524
W +E LL++ P +P +YVLLS++ AS +WD +++R M ++GV+K PG SWI+ K ++
Sbjct: 829 WVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGVKKQPGQSWIQLKDQI 888
Query: 525 HIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLA 584
H F D S P D+IY+ L+ L ++ + GY D+ V+ DVE + +++HHSEKLA
Sbjct: 889 HTFVMGDRSHPQDDEIYSYLDILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLA 948
Query: 585 IAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCG 644
+ FG++ PIR++KNLR+C+DCHN KY S++ REI+VRD RFH FK+G CSCG
Sbjct: 949 VVFGIINTANRTPIRIIKNLRICTDCHNFIKYASQLLDREIIVRDIHRFHHFKHGSCSCG 1008
Query: 645 DFW 647
D+W
Sbjct: 1009 DYW 1011
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 199/399 (49%), Gaps = 57/399 (14%)
Query: 112 NTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLA 171
N ++T + + +++LF + +++ +WT +I+G + G +LFREM+ +G
Sbjct: 328 NHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGAC 387
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
+Q+T SVL C L+ GK +HA+++RN +V +G++++D+Y KCK +YAE +
Sbjct: 388 PNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERL 447
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIF--------------------CNMQRNGI 271
F M +VVSW M+ Y + G E+++ +F C +R+ +
Sbjct: 448 FELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHAL 507
Query: 272 E-------------PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVT 318
E F++ +++S +L+ +E G Q HG L G S + ++LV
Sbjct: 508 EQLYCMVECGTEFSAVTFSIALILAS--SLSHVELGRQLHGMVLKFGFDSDGFIRSSLVE 565
Query: 319 FYGKCGNIEDSHRLFNEM--------NVRDE--------VSWTALVSGYAKFGKANETID 362
Y KCG ++ + + ++ N R VSW ++VSGY GK + +
Sbjct: 566 MYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLK 625
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--TCMID 420
F M+ + D T+ ++SAC+ AG++E GRH V++ G R D Y + +ID
Sbjct: 626 TFRLMVRELVVVDIRTVTTIISACANAGILEFGRH-VHAYVQKIGHRI--DAYVGSSLID 682
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+ S++G L++A + + P+ + W +++S +HG
Sbjct: 683 MYSKSGSLDDAW-MVFRQSNEPNIVMWTSMISGYALHGQ 720
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 121/276 (43%), Gaps = 32/276 (11%)
Query: 196 IHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGC 255
+HA ++N + + L+ +Y K ++ +A+ +F + +N +WT ++ G+ + G
Sbjct: 311 LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGS 370
Query: 256 SEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNA 315
SE +F MQ G P+ +TL SV+ C+ +L+ G H L G+ + + N+
Sbjct: 371 SEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNS 430
Query: 316 LVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK--------- 366
++ Y KC E + RLF MN D VSW ++ Y + G +++D+F +
Sbjct: 431 ILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSW 490
Query: 367 ----------------------MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
M+ G + VT L S VE GR MV
Sbjct: 491 NTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQ-LHGMVL 549
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF 440
++G + ++++ + GR+++A + +P
Sbjct: 550 KFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPL 585
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 31/185 (16%)
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H + G + + +N L+T Y K N+ + +LF+E+ R+ +WT L+SG+A+ G
Sbjct: 311 LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGS 370
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVE--KGRH----------------- 397
+ +LF +M + G P++ TL VL CS ++ KG H
Sbjct: 371 SEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNS 430
Query: 398 ----YFEIMVKEYGIRPIH-------DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIG 446
Y + V EY R + MI RAG +E++ ++P+ D +
Sbjct: 431 ILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPY-KDVVS 489
Query: 447 WATLL 451
W T++
Sbjct: 490 WNTIV 494
>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
Length = 635
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 246/558 (44%), Positives = 339/558 (60%), Gaps = 6/558 (1%)
Query: 95 DAKRGFDELPEKNIVMYNTMITGLLR--RGLVEESRRLFRGMKDKDSISWTTMITGLMQN 152
DA LP ++ YNT++ L R RGL +R LF M +D SW+ +++ ++
Sbjct: 79 DALALLSSLPSTDVCSYNTLVAALGRSPRGLAS-ARALFDRMPRRDHFSWSAIVSAHARH 137
Query: 153 GLEREAIDLFREM-RLEGLAM--DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNV 209
G R A+ ++R M R G A ++FT S L A G+++H ++R +
Sbjct: 138 GQPRAALAIYRRMLREPGSAGVDNEFTASSALAAATAARCARAGRELHCHVVRRGIDADA 197
Query: 210 FVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN 269
V SAL DMY KC + A SVF M ++VVSWTAM+ Y E ++F M R+
Sbjct: 198 VVWSALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFDARRDGEGFRLFVRMLRS 257
Query: 270 GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
GI+P++FT V+ +CA S + G Q HGR + +ALV Y K G++ +
Sbjct: 258 GIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGDMGTA 317
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
R+F M D VSWTA++SGYA+ G+ +E + F+ +L G +PD VT +GVLSAC+ A
Sbjct: 318 VRVFRGMPKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSACAHA 377
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
GLV+KG F + EYGI DHY C+ID+LSR+G E A+ IN M P+ WA+
Sbjct: 378 GLVDKGLSIFHSIKDEYGIEHTADHYACVIDLLSRSGLFERAEEMINTMSVKPNKFLWAS 437
Query: 450 LLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
LL CRIH NV + +WAAE+L E++P NPA+YV L++IYAS G +D V RR M KG+
Sbjct: 438 LLGGCRIHKNVRLARWAAEALFEIEPENPATYVTLANIYASVGLFDEVENTRRIMELKGI 497
Query: 510 RKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVEL 569
K P SWI+ +R+H+F D P ++Q+YA L+KL KM +EGYV D VLHDVE
Sbjct: 498 TKMPASSWIEVGTRMHVFLVGDKLHPQAEQVYALLKKLYVKMREEGYVADTGFVLHDVED 557
Query: 570 SEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRD 629
+K + + +HSE+LA+AFG++ P G PI+V KNLR+C DCH K ISKI QREI+VRD
Sbjct: 558 EQKQQDIGYHSERLAVAFGIIATPKGAPIKVFKNLRICGDCHTTIKLISKIVQREIIVRD 617
Query: 630 AVRFHLFKNGECSCGDFW 647
+ RFH FKNG CSC D+W
Sbjct: 618 SNRFHHFKNGSCSCRDYW 635
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 172/354 (48%), Gaps = 35/354 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKD--GLGNLSRITFSTMLIMSSSRRCV 58
MP D SW+ ++S HA HG A+ +Y ML++ G + T S+ L +++ RC
Sbjct: 119 MPRRDHFSWSAIVSAHARHGQPRAALAIYRRMLREPGSAGVDNEFTASSALAAATAARCA 178
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
GR++H H+++ G + V S L DMYAK G + DA+ FD +P +++V
Sbjct: 179 RAGRELHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVV--------- 229
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
SWT M+ + E LF M G+ ++FT+
Sbjct: 230 ----------------------SWTAMVERYFDARRDGEGFRLFVRMLRSGIQPNEFTYA 267
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
VL AC + + GKQ+H + ++ D+ F SALV MY K + A VFR M
Sbjct: 268 GVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGMPKL 327
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-F 297
++VSWTAM+ GY QNG +EA++ F + R+G PD T V+S+CA+ +++G F
Sbjct: 328 DLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGLSIF 387
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
H G+ ++ + G E + + N M+V+ ++ W +L+ G
Sbjct: 388 HSIKDEYGIEHTADHYACVIDLLSRSGLFERAEEMINTMSVKPNKFLWASLLGG 441
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 263/707 (37%), Positives = 386/707 (54%), Gaps = 67/707 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFS-TMLIMSSSRRCVDL-GR 62
+G N ++ G+ S A+ VY ML+ N++ ++ +L S S R + G+
Sbjct: 90 NGFICNTMMKGYMQRNSPCKAIWVYKFMLE---SNVAADNYTYPILFQSCSIRLAEFDGK 146
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFD--------------------- 101
I H+LK GF S V++ + L++MYA G + DA++ FD
Sbjct: 147 CIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVG 206
Query: 102 ----------ELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQ 151
+PE+N++ N+MI ++G VEE+ +LF MK KD +SW+ +I+ Q
Sbjct: 207 NVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQ 266
Query: 152 NGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFV 211
N + EA+ LF+EM G+ +D+ SVL+AC LL + GK +H +++ + V +
Sbjct: 267 NEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNL 326
Query: 212 GSALVDM-------------------------------YCKCKSIKYAESVFRTMAWKNV 240
+AL+ M Y KC I+ A ++F +M K+
Sbjct: 327 QNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDN 386
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW+AM+ GY Q E + +F MQ G +PD+ L SVIS+C +LA+L++G H
Sbjct: 387 VSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAY 446
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
GL I + L+ Y K G +ED+ +F + + +W AL+ G A G +++
Sbjct: 447 IRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKS 506
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ F +M HG+ P+E+T + VL AC GLV++G +F M++E+ I P HY CM+D
Sbjct: 507 LKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVD 566
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG L+EA+ I MP PD W LL +C+ +G+ E G+ L+EL P +
Sbjct: 567 LLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGF 626
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
VLLS+IYASKG W V ++R MR+ GV K PGCS I+ RVH F A D + P ++ I
Sbjct: 627 NVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHI 686
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
L+++ +K+ EGY PD V D++ EK L HSEKLAIAFGL+ I P PIR+
Sbjct: 687 EHMLDEMAKKLKLEGYAPDTREVSLDIDEEEKETTLFRHSEKLAIAFGLIAIDPPTPIRI 746
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VKNLR+C+DCH A K ISK REI+VRD RFH FK G CSC D+W
Sbjct: 747 VKNLRICNDCHTAAKLISKAFNREIVVRDRHRFHHFKQGSCSCMDYW 793
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 179/401 (44%), Gaps = 94/401 (23%)
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
+ +S ++F +++ + TM+ G MQ +AI +++ M +A D +T+ + +
Sbjct: 76 INQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQS 135
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C LA +GK I +++ +V++ + L++MY C ++ A VF + ++VSW
Sbjct: 136 CSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSW 195
Query: 244 TAMLVGY-------------------------------GQNGCSEEAVKIFCNMQR---- 268
+ML GY G+ G EEA K+F M++
Sbjct: 196 NSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLV 255
Query: 269 ---------------------------NGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
NGI D+ + SV+S+C+ L + G HG
Sbjct: 256 SWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLV 315
Query: 302 LVTGLISFITVSNALVTFYG-------------------------------KCGNIEDSH 330
+ G+ +++ + NAL+ Y KCG IE +
Sbjct: 316 VKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKAR 375
Query: 331 RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
LF+ M +D VSW+A++SGYA+ + ET+ LF++M G KPDE L+ V+SAC+
Sbjct: 376 ALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLA 435
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEA 431
+++G+ + +++ G++ T +I++ + G +E+A
Sbjct: 436 ALDQGK-WIHAYIRKNGLKINIILGTTLINMYMKLGCVEDA 475
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 37/262 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSW+ +ISG+A + + ++ M +G I S ++ + +D
Sbjct: 381 MPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVS-VISACTHLAALDQ 439
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ IH +I K G + +G+ L++MY KLG + DA F L EK + +N +I GL
Sbjct: 440 GKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAM 499
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GLV++S + F EM+ G+ ++ TF +V
Sbjct: 500 NGLVDKS-------------------------------LKTFSEMKEHGVTPNEITFVAV 528
Query: 181 LTACGGLLALEEG-KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW-K 238
L AC + ++EG + ++ I + N+ +VD+ + +K AE + +M
Sbjct: 529 LGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAP 588
Query: 239 NVVSWTAMLVG---YGQNGCSE 257
+V +W A+L YG N E
Sbjct: 589 DVSTWGALLGACKKYGDNETGE 610
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 111/265 (41%), Gaps = 43/265 (16%)
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAES--VFRTMAWKNVVSWTAML 247
+++ QI + +I + + F S L+ + I +S +F + N M+
Sbjct: 39 IKQFNQILSQMILSGFFKDSFAASRLLKFSTELPFININQSYQIFSHIENPNGFICNTMM 98
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
GY Q +A+ ++ M + + D++T + SC+ + +G L G
Sbjct: 99 KGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCIQDHVLKVGFD 158
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
S + + N L+ Y CGN+ D+ ++F+ +V D VSW ++++GY G E D++++M
Sbjct: 159 SDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRM 218
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
P+ V+++ S MI + + G
Sbjct: 219 ------PER----NVIASNS------------------------------MIVLFGKKGN 238
Query: 428 LEEAKSFINKMPFPPDAIGWATLLS 452
+EEA N+M D + W+ L+S
Sbjct: 239 VEEACKLFNEMK-QKDLVSWSALIS 262
>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 249/600 (41%), Positives = 368/600 (61%), Gaps = 32/600 (5%)
Query: 49 LIMSSSR-RCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKN 107
L+ SS+R R G H I++ G + + L++MY+K GL
Sbjct: 53 LLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGL--------------- 97
Query: 108 IVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL 167
VE +R+LF M + +SW TM+ QNG +A+ LF +M+
Sbjct: 98 ----------------VESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQK 141
Query: 168 EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY 227
EG + +FT SV+ AC + E KQ+H F ++ NVFVG+AL+D+Y KC +K
Sbjct: 142 EGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKD 201
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN 287
A VF M ++ V+W++M+ GY QN EEA+ +F Q G+E + FT+ S +S+CA
Sbjct: 202 ANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAA 261
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
A+L EG Q S TG+ S I V ++L+ Y KCG IE+++ +F+ + ++ V W A+
Sbjct: 262 RAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAI 321
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYG 407
+SG+++ ++ E + FEKM G+ P+++T I VLSACS GLVEKGR YF++M++ +
Sbjct: 322 LSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHN 381
Query: 408 IRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAA 467
+ P HY+CM+DIL RAG L EAK FI++MPF A W +LL+SCRI+ N+E+ + AA
Sbjct: 382 VSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLELAEVAA 441
Query: 468 ESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF 527
+ L E++P+N ++VLLS+IYA+ +W+ V++ R ++E +K+ G SWI+ K +VH F
Sbjct: 442 KHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKKERGKSWIEIKHKVHSF 501
Query: 528 SADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAF 587
+ + P +IY +LE L +M K GY LHDVE S K ++L HHSEKLA+ F
Sbjct: 502 MVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESRKQELLRHHSEKLALTF 561
Query: 588 GLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G++ +P G PIR++KNLR+C DCH+ K S IT+REI+VRD RFH FKNG CSCG+FW
Sbjct: 562 GIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDTNRFHHFKNGYCSCGEFW 621
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/297 (35%), Positives = 163/297 (54%), Gaps = 32/297 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP VSWN ++ H +G A+ ++ M K+G + S T S+++ +++ CV
Sbjct: 108 MPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEG-TSCSEFTVSSVVCACAAKCCVFE 166
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+Q+HG LK S VFVG+ L+D+YAK GL+ DA N+V
Sbjct: 167 CKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDA----------NLV----------- 205
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
F M ++ ++W++M+ G +QN L EA+ LF + GL +QFT S
Sbjct: 206 ----------FECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSA 255
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+AC AL EGKQ+ A + N+FV S+L+DMY KC I+ A +VF ++ KNV
Sbjct: 256 LSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNV 315
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
V W A+L G+ ++ S EA+ F MQ+ GI P+D T SV+S+C++L +E+G ++
Sbjct: 316 VLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKY 372
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 245/643 (38%), Positives = 375/643 (58%), Gaps = 31/643 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
+ VSWN +I G + G + +A ++ M ++ +T +L + +++
Sbjct: 199 NAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKEL 258
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG+ ++ GF V + V YAK G++ A+R
Sbjct: 259 HGYSIRHGFQYDELVANGFVAAYAKCGMLICAER-------------------------- 292
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+F M+ K SW +I G QNG R+A++L+ +M GL D FT GS+L A
Sbjct: 293 -----VFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLAS 347
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L +L GK++H F++R+ + + F+G +L+ +Y C A +F M K+ VSW
Sbjct: 348 AHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWN 407
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
AM+ GY QNG E+A+ +F + +G +P D + SV+ +C+ ++L G + H +L
Sbjct: 408 AMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKA 467
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
L+ + V+ + + Y K G I++S +F+ + +D SW A+++ Y G E+I+LF
Sbjct: 468 LLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELF 527
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
E+M G PD T IG+L+ CS AGLVE+G YF M +GI P +HY C++D+L R
Sbjct: 528 ERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGR 587
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AGRL++A +++MP PD+ W++LLS CR G +EIG+ AE LLEL+P N +YV L
Sbjct: 588 AGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSL 647
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S++YA G+WD V ++R+ +++ G++KD GCSWI+ +VH F A D P S ++
Sbjct: 648 SNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMTW 707
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
KL +KM K GY P+ S+VLHDV+ +KI+ L HSEKLAI FGLL G +R+ KNL
Sbjct: 708 RKLEKKMCKIGYKPNTSAVLHDVDEEKKIEKLRGHSEKLAICFGLLNTTKGTTLRIFKNL 767
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R+C DCHNA+K++S++T REI++RD RFH FK+G CSCGD+W
Sbjct: 768 RICVDCHNASKFMSEVTGREIIIRDNKRFHHFKDGLCSCGDYW 810
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 146/466 (31%), Positives = 240/466 (51%), Gaps = 41/466 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRI-TFSTMLIMSSSRRCVD 59
MP + VSWN +ISG + +G D + M+ G L I T T+L + + V
Sbjct: 92 MPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQ 151
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+G +IHG +K G V V + LVDMY+K G + +A+ FD KN
Sbjct: 152 MGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFD----KN------------ 195
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL-EGLAMDQFTFG 178
K+++SW TMI GL G EA +LFREM++ E + +++ T
Sbjct: 196 ---------------NRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVL 240
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
++L AC + L K++H + IR+ + + V + V Y KC + AE VF +M K
Sbjct: 241 NILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETK 300
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
V SW A++ G QNG +A+ ++ M +G+ PD FT+GS++ + A+L SL G + H
Sbjct: 301 TVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVH 360
Query: 299 GRSLVTGL--ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
G L GL SFI +S L++ Y CG + LF+ M + VSW A++SGY++ G
Sbjct: 361 GFVLRHGLEIDSFIGIS--LLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGL 418
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
+ + LF K++S G +P ++ ++ VL ACS+ + G+ +K + +
Sbjct: 419 PEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDV--FVA 476
Query: 417 C-MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
C ID+ +++G ++E++S + + D W ++++ +HG+ E
Sbjct: 477 CSTIDMYAKSGCIKESRSVFDGLK-NKDLASWNAIIAAYGVHGDGE 521
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 135/510 (26%), Positives = 223/510 (43%), Gaps = 74/510 (14%)
Query: 23 NDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSP 82
+DA+ ++ ++ D N TF ++ + LG IHG ++K G VFVG+
Sbjct: 12 SDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNA 71
Query: 83 LVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISW 142
L+ MY K G + A + F +P +N+V +N
Sbjct: 72 LIAMYGKFGFVDAAVKVFHYMPVRNLVSWN------------------------------ 101
Query: 143 TTMITGLMQNGLEREAIDLFREMRL--EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFI 200
++I+G +NG ++ D+ EM EGL D T +VL C + ++ G +IH
Sbjct: 102 -SIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLA 160
Query: 201 IRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAV 260
++ ++V V ++LVDMY KC + A+ +F KN VSW M+ G G EA
Sbjct: 161 VKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAF 220
Query: 261 KIFCNMQ-RNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTF 319
+F MQ + IE ++ T+ +++ +C ++ L + HG S+ G V+N V
Sbjct: 221 NLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAA 280
Query: 320 YGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTL 379
Y KCG + + R+F M + SW AL+ G A+ G + ++L+ +M GL PD T+
Sbjct: 281 YAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTI 340
Query: 380 IGVLSACSRAGLVEKG--------RHYFEI-------MVKEY-------GIRPIHD---- 413
+L A + + G RH EI ++ Y R + D
Sbjct: 341 GSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEE 400
Query: 414 ----HYTCMIDILSRAGRLEEAKSFINKM---PFPPDAIGWATLLSSCRIHGNVEIGK-- 464
+ MI S+ G E+A K+ F P I ++L +C + +GK
Sbjct: 401 KSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKET 460
Query: 465 --WAAESLLELDPYNPASYVLLSSIYASKG 492
+A ++LL D + S + +YA G
Sbjct: 461 HCYALKALLMEDVFVACSTI---DMYAKSG 487
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 135/246 (54%), Gaps = 4/246 (1%)
Query: 145 MITGLMQNGLEREAIDLFREMRLEG-LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRN 203
M + +N L +AID+F ++ + D FTF V+ AC G L G+ IH +I+
Sbjct: 1 MHVAVHRNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKM 60
Query: 204 DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIF 263
+VFVG+AL+ MY K + A VF M +N+VSW +++ G+ +NG S++ +
Sbjct: 61 GLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDML 120
Query: 264 CNMQ--RNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYG 321
M G+ PD TL +V+ CA ++ G + HG ++ GL + V+N+LV Y
Sbjct: 121 VEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYS 180
Query: 322 KCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM-LSHGLKPDEVTLI 380
KCG + ++ LF++ N ++ VSW ++ G G E +LF +M + ++ +EVT++
Sbjct: 181 KCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVL 240
Query: 381 GVLSAC 386
+L AC
Sbjct: 241 NILPAC 246
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 5/209 (2%)
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
M V +N +A+ +F + + D+FT VI +C G HG +
Sbjct: 1 MHVAVHRNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKM 60
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
GL+ + V NAL+ YGK G ++ + ++F+ M VR+ VSW +++SG+++ G + + D+
Sbjct: 61 GLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDML 120
Query: 365 EKMLS--HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL 422
+M++ GL PD TL+ VL C+R V+ G + VK G+ ++D+
Sbjct: 121 VEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVK-LGLSEDVRVNNSLVDMY 179
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLL 451
S+ G L EA+ +K +A+ W T++
Sbjct: 180 SKCGYLTEAQMLFDKNN-RKNAVSWNTMI 207
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 239/647 (36%), Positives = 380/647 (58%), Gaps = 40/647 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL---G 61
D +SWN ++S + +G +A++ + ML+ G + + ++ +SS+ + G
Sbjct: 330 DYISWNSMLSCYVQNGLYAEAIEFISEMLRGGF----QPDHACIVSLSSAVGHLGWLLNG 385
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+++H + +K S VG+ L+DMY K I
Sbjct: 386 KEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYI---------------------------- 417
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
E S +F M+ KD ISWTT+IT Q+ EA+++FRE + EG+ +D GS+L
Sbjct: 418 ---EYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSIL 474
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
AC GL + KQ+H + IRN D V V + ++D+Y +C + ++ +F T+ K++V
Sbjct: 475 EACSGLETILLAKQLHCYAIRNGLLDLV-VKNRIIDIYGECGEVYHSLKMFETVEQKDIV 533
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
+WT+M+ Y +G EA+ +F MQ ++PD L S++ + L+SL +G + HG
Sbjct: 534 TWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFL 593
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ + ++LV Y CG++ + ++FN + +D V WTA+++ G + I
Sbjct: 594 IRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAI 653
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
DLF++ML G+ PD V+ + +L ACS + LV +G+ Y ++M+ Y + P +HY C++D+
Sbjct: 654 DLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDL 713
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
L R+G+ EEA FI MP P ++ W +LL +CR+H N E+ AA LLEL+P NP +Y
Sbjct: 714 LGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNY 773
Query: 482 VLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIY 541
VL+S+++A GKW++ ++R + E+G+RKDP CSWI+ + VH F+ D S +++I
Sbjct: 774 VLVSNVFAEMGKWNNAKEVRARISERGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERIN 833
Query: 542 AELEKLNRKMIKE-GYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
+L ++ ++ KE GY D SVLHDV EK+ +L+ HSE+LAI+FGL+ PG+P+R+
Sbjct: 834 LKLAEITERLRKEGGYTEDTRSVLHDVSEEEKVDVLHRHSERLAISFGLINTRPGMPLRI 893
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCH TK +SK+ R+I+VRDA RFH F G CSCGDFW
Sbjct: 894 AKNLRVCGDCHEFTKLVSKLFDRDIVVRDANRFHHFSGGSCSCGDFW 940
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/463 (28%), Positives = 230/463 (49%), Gaps = 45/463 (9%)
Query: 3 FHDG---VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
HDG SWN +ISG +G A+ ++ M + L S T + + + + ++
Sbjct: 225 MHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQ-LN 283
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
LGR++H +LK G E NI N ++
Sbjct: 284 LGRELHAALLKSG-------------------------------SEVNI-QCNALLVMYT 311
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ G V+ + R+FR + +KD ISW +M++ +QNGL EAI+ EM G D S
Sbjct: 312 KCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVS 371
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+ +A G L L GK++HA+ I+ + VG+ L+DMY KC+ I+Y+ VF M K+
Sbjct: 372 LSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKD 431
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+SWT ++ Y Q+ EA++IF Q+ GI+ D +GS++ +C+ L ++ Q H
Sbjct: 432 HISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHC 491
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
++ GL+ + V N ++ YG+CG + S ++F + +D V+WT++++ YA G NE
Sbjct: 492 YAIRNGLLDLV-VKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNE 550
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH---YT 416
+ LF +M S ++PD V L+ +L A + KG+ +++ R H +
Sbjct: 551 ALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIR----RNFHMEEAIVS 606
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
++D+ S G L A N + D + W ++++ +HG+
Sbjct: 607 SLVDMYSGCGSLSGALKVFNAVKC-KDMVLWTAMINATGMHGH 648
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/481 (27%), Positives = 224/481 (46%), Gaps = 67/481 (13%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSR--ITFSTMLIMSSSRRCVDLGRQIH 65
SWN LI + S GS +A+ VY M ++ T +++L S G ++H
Sbjct: 128 SWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVH 187
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPE-KNIVMYNTMITGLLRRGLV 124
G +K G FV + L+ MYAK G++ A R F+ + + +++ +N+MI+G L+ G+
Sbjct: 188 GLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMF 247
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
++ LFRGM+ A+ L+M+ +T VL C
Sbjct: 248 LQALDLFRGMQ---------------------RAV----------LSMNSYTTVGVLQVC 276
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L L G+++HA ++++ + N+ + LV MY KC + A VFR + K+ +SW
Sbjct: 277 TELAQLNLGRELHAALLKSGSEVNIQCNALLV-MYTKCGRVDSALRVFREIDEKDYISWN 335
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
+ML Y QNG EA++ M R G +PD + S+ S+ +L L G + H ++
Sbjct: 336 SMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQ 395
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
L S V N L+ Y KC IE S +F+ M ++D +SWT +++ YA+ + E +++F
Sbjct: 396 RLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIF 455
Query: 365 EKMLSHGLKPDEVTLIGVLSACS----------------RAGLV-------------EKG 395
+ G+K D + + +L ACS R GL+ E G
Sbjct: 456 REAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGLLDLVVKNRIIDIYGECG 515
Query: 396 RHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP---FPPDAIGWATLLS 452
Y + + E + +T MI+ + +G L EA +M PD++ ++L
Sbjct: 516 EVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILG 575
Query: 453 S 453
+
Sbjct: 576 A 576
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 207/443 (46%), Gaps = 54/443 (12%)
Query: 48 MLIMSSSRRCVDLGRQIHGHILKFGF--GSYVFVGSPLVDMYAKLGLIYDAKRGFDELPE 105
+L + ++++ V G Q+H H + G G F+ + L+ MY K G + DA
Sbjct: 64 VLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADA--------- 114
Query: 106 KNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM 165
R LF GM + SW +I + +G EA+ ++R M
Sbjct: 115 ----------------------RLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAM 152
Query: 166 RL---EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC 222
RL G+A D T SVL A G G ++H +++ + FV +AL+ MY KC
Sbjct: 153 RLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKC 212
Query: 223 KSIKYAESVFRTM-AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
+ A VF M ++V SW +M+ G QNG +A+ +F MQR + + +T V
Sbjct: 213 GILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGV 272
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLISFITVS-NALVTFYGKCGNIEDSHRLFNEMNVRD 340
+ C LA L G + H L +G S + + NAL+ Y KCG ++ + R+F E++ +D
Sbjct: 273 LQVCTELAQLNLGRELHAALLKSG--SEVNIQCNALLVMYTKCGRVDSALRVFREIDEKD 330
Query: 341 EVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
+SW +++S Y + G E I+ +ML G +PD ++ + SA G + G+
Sbjct: 331 YISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKE--- 387
Query: 401 IMVKEYGIRPIHDHYT----CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS---- 452
V Y I+ D T ++D+ + +E + ++M D I W T+++
Sbjct: 388 --VHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRI-KDHISWTTIITCYAQ 444
Query: 453 SCRIHGNVEIGKWAAESLLELDP 475
S R +EI + A + +++DP
Sbjct: 445 SSRHIEALEIFREAQKEGIKVDP 467
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 181/378 (47%), Gaps = 39/378 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +SW +I+ +A +A++++ K+G+ + + ++L S + L
Sbjct: 427 MRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGI-KVDPMMIGSILEACSGLETILL 485
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+Q+H + ++ G V V + ++D+Y + G +Y + + F+ + +K+IV + +MI
Sbjct: 486 AKQLHCYAIRNGLLDLV-VKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYAN 544
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL+ EA+ LF EM+ + D S+
Sbjct: 545 SGLLN-------------------------------EALVLFAEMQSTDVQPDSVALVSI 573
Query: 181 LTACGGLLALEEGKQIHAFII-RNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
L A GGL +L +GK++H F+I RN H + V S+LVDMY C S+ A VF + K+
Sbjct: 574 LGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIV-SSLVDMYSGCGSLSGALKVFNAVKCKD 632
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+V WTAM+ G +G ++A+ +F M + G+ PD + +++ +C++ + EG +
Sbjct: 633 MVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLD 692
Query: 300 RSLVT-GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE-VSWTALVSGYAKFGKA 357
+ T L + +V G+ G E+++ M ++ + V W +L+ G + K
Sbjct: 693 MMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLL-GACRVHKN 751
Query: 358 NETIDLFEKMLSHGLKPD 375
+E + L L+PD
Sbjct: 752 HELAVVAANRLLE-LEPD 768
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 130/518 (25%), Positives = 233/518 (44%), Gaps = 46/518 (8%)
Query: 144 TMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRN 203
T + L + G R+A+ L + G + Q +G VL A+ +G Q+HA +
Sbjct: 29 TSLKQLCKEGNLRQALRLLTS-QTPGRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVAT 87
Query: 204 D--HKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVK 261
D+ F+ + L+ MY KC + A +F M+ + V SW A++ Y +G + EA+
Sbjct: 88 GSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALG 147
Query: 262 IFCNMQ---RNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVT 318
++ M+ +G+ PD TL SV+ + G + HG ++ GL V+NAL+
Sbjct: 148 VYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIA 207
Query: 319 FYGKCGNIEDSHRLFNEM-NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEV 377
Y KCG ++ + R+F M + RD SW +++SG + G + +DLF M L +
Sbjct: 208 MYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSY 267
Query: 378 TLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINK 437
T +GVL C+ + GR ++K ++ ++ + ++ GR++ A +
Sbjct: 268 TTVGVLQVCTELAQLNLGRELHAALLKSGS--EVNIQCNALLVMYTKCGRVDSALRVFRE 325
Query: 438 MPFPPDAIGWATLLSSCRIHGNV--EIGKWAAESLLELDPYNPASYVLLSS--------- 486
+ D I W ++L SC + + E ++ +E L + A V LSS
Sbjct: 326 ID-EKDYISWNSML-SCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLL 383
Query: 487 ------IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKS----RVHIFSADDWSSPY 536
YA K + D +Q+ T+ + ++ C +I+Y + R+ I W++
Sbjct: 384 NGKEVHAYAIKQRLDSDTQVGNTLMDMYMK----CRYIEYSAHVFDRMRIKDHISWTTII 439
Query: 537 S--DQIYAELEKLN--RKMIKEGYVPD---MSSVLHDVELSEKIKMLNHHSEKLAIAFGL 589
+ Q +E L R+ KEG D + S+L E I +L AI GL
Sbjct: 440 TCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETI-LLAKQLHCYAIRNGL 498
Query: 590 LFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILV 627
L + + R++ C + +++ K + Q++I+
Sbjct: 499 LDLV--VKNRIIDIYGECGEVYHSLKMFETVEQKDIVT 534
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 246/563 (43%), Positives = 348/563 (61%), Gaps = 11/563 (1%)
Query: 87 YAKL-GLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTM 145
Y K+ G + +A FD++PE + V YN M+ LR VE + F M KD SW T+
Sbjct: 114 YTKVAGKVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTL 173
Query: 146 ITGLMQNGLEREAIDLFREM-RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRND 204
I+G QNG ++A DLF M G++ G V G L A EE + +N
Sbjct: 174 ISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYV--EHGDLEAAEE-------LYKNV 224
Query: 205 HKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFC 264
+V V +A++ Y K ++ AE +F+ MA KN+V+W +M+ GY +N +E+ +K+F
Sbjct: 225 GMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFK 284
Query: 265 NMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCG 324
M + + P+ +L SV+ C+NL++L G Q H + L T +L++ Y KCG
Sbjct: 285 TMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCG 344
Query: 325 NIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
+++ + +LF EM +D +SW A++SGYA+ G + + LF+KM + +KPD +T + V+
Sbjct: 345 DLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVIL 404
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDA 444
AC+ AG V+ G YF+ M KE+GI HYTC+ID+L RAGRL+EA S I +MPF P A
Sbjct: 405 ACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFKPHA 464
Query: 445 IGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTM 504
+ TLL +CRIH N+++ ++AA +LL LDP + YV L++IYA+ KWD V+++R+ M
Sbjct: 465 AIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMM 524
Query: 505 REKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVL 564
+E V K PG SWI+ KS H F + D P I+ +L +L+ KM GYVPD+ L
Sbjct: 525 KEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFAL 584
Query: 565 HDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQRE 624
HDVE K K+L HSEKLAIAFGL+ PG PIRV KNLRVC DCH A K+IS I +RE
Sbjct: 585 HDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGDCHRAIKFISAIEKRE 644
Query: 625 ILVRDAVRFHLFKNGECSCGDFW 647
I+VRD RFH F+NG CSCGD+W
Sbjct: 645 IIVRDTTRFHHFRNGFCSCGDYW 667
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 188/419 (44%), Gaps = 56/419 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLML-KDGLGNLSRITFSTMLIMSSSRRCVD 59
MP D SWN LISG A +G + A ++++M K+G+
Sbjct: 162 MPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVS--------------------- 200
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
S ++ Y + G + A+ + + K++V+ M+TG +
Sbjct: 201 --------------------WSAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYM 240
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ G VE + R+F+ M K+ ++W +MI G ++N + + +F+ M + + + S
Sbjct: 241 KFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSS 300
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL C L AL G+Q+H + ++ + ++L+ MYCKC + A +F M K+
Sbjct: 301 VLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKD 360
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FH 298
V+SW AM+ GY Q+G +A+ +F M+ ++PD T +VI +C + ++ G Q F
Sbjct: 361 VISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFK 420
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G+ + ++ G+ G ++++ L EM + + + G + K
Sbjct: 421 SMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGACRIHK-- 478
Query: 359 ETIDLFEKMLSHGLKPDE------VTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
+DL E + L D V L + +A ++ V K R M+KE+ + I
Sbjct: 479 -NLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRK----MMKEHNVVKI 532
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 84/164 (51%), Gaps = 20/164 (12%)
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF-GKANETIDLFEKML 368
++++ + +F C ++E + +F +M+VR V+W ++SGY K GK E +LF+K+
Sbjct: 74 VSLNKTIASFVRAC-DLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKI- 131
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD--HYTCMIDILSRAG 426
+PD V+ +L R+ VE +F M P+ D + +I ++ G
Sbjct: 132 ---PEPDSVSYNIMLVCYLRSYGVEAALAFFNKM-------PVKDIASWNTLISGFAQNG 181
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL 470
++++A + MP + + W+ ++S HG++E AAE L
Sbjct: 182 QMQKAFDLFSVMP-EKNGVSWSAMISGYVEHGDLE----AAEEL 220
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 247/641 (38%), Positives = 366/641 (57%), Gaps = 31/641 (4%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSWN +I G++ G ++ M ++ ++ +T +L S + ++IHG
Sbjct: 366 VSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHG 425
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+ + GF V + V YAK + +
Sbjct: 426 YAFRHGFLKDELVANAFVAAYAKCSSL-------------------------------DC 454
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+ R+F GM+ K SW +I QNG +++DLF M G+ D+FT GS+L AC
Sbjct: 455 AERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACAR 514
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L L GK+IH F++RN + + F+G +L+ +Y +C S+ + +F M K++V W M
Sbjct: 515 LKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVM 574
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ G+ QN EA+ F M GI+P + + V+ +C+ +++L G + H +L L
Sbjct: 575 ITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHL 634
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
V+ AL+ Y KCG +E S +F+ +N +DE W +++GY G + I+LFE
Sbjct: 635 SEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFEL 694
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M + G +PD T +GVL AC+ AGLV +G Y M YG++P +HY C++D+L RAG
Sbjct: 695 MQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAG 754
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+L EA +N+MP PD+ W++LLSSCR +G++EIG+ ++ LLEL+P +YVLLS+
Sbjct: 755 QLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSN 814
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
+YA GKWD V ++R+ M+E G+ KD GCSWI+ V+ F D S S +I K
Sbjct: 815 LYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKKIQQTWIK 874
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
L +K+ K GY PD S VLH++E KIK+L HSEKLAI+FGLL G +RV KNLR+
Sbjct: 875 LEKKISKIGYKPDTSCVLHELEEEGKIKILKSHSEKLAISFGLLNTAKGTTLRVCKNLRI 934
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCHNA K +SK+ +R+I+VRD RFH FKNG C+CGDFW
Sbjct: 935 CVDCHNAIKLVSKVVKRDIIVRDNKRFHHFKNGLCTCGDFW 975
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 143/492 (29%), Positives = 247/492 (50%), Gaps = 49/492 (9%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYN-LMLKDGLGNLSRI-TFSTMLIMSSSRRCVDLGRQI 64
VSWN ++ + +G + V+ L++ + G + + T T++ ++ V +G +
Sbjct: 262 VSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVV 321
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG K G V V + LVDMY+K G + +A+ FD KN+V +NT+I G + G
Sbjct: 322 HGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEG-- 379
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAMDQFTFGSVLTA 183
FRG+ +L +EM R E + +++ T +VL A
Sbjct: 380 -----DFRGV------------------------FELLQEMQREEKVRVNEVTVLNVLPA 410
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C G L K+IH + R+ + V +A V Y KC S+ AE VF M K V SW
Sbjct: 411 CSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSW 470
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
A++ + QNG +++ +F M +G++PD FT+GS++ +CA L L G + HG L
Sbjct: 471 NALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLR 530
Query: 304 TG--LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
G L FI +S L++ Y +C ++ +F++M + V W +++G+++ E +
Sbjct: 531 NGLELDEFIGIS--LMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEAL 588
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY-TC-MI 419
D F +MLS G+KP E+ + GVL ACS+ + G+ +K + D + TC +I
Sbjct: 589 DTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAH---LSEDAFVTCALI 645
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE--SLLELDPYN 477
D+ ++ G +E++++ +++ +A+ W +++ IHG+ G A E L++
Sbjct: 646 DMYAKCGCMEQSQNIFDRVNEKDEAV-WNVIIAGYGIHGH---GLKAIELFELMQNKGGR 701
Query: 478 PASYVLLSSIYA 489
P S+ L + A
Sbjct: 702 PDSFTFLGVLIA 713
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 186/376 (49%), Gaps = 38/376 (10%)
Query: 20 GSVNDAVKVYNLMLKDGL---GNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSY 76
G++NDA+ + + ++G ++S+ +L + + +GR++H
Sbjct: 67 GNLNDALNLLHSHAQNGTVSSSDISKEAIGILLRACGHHKNIHVGRKVHA---------- 116
Query: 77 VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKD 136
LV KL R L + I MY+ G +SR +F K+
Sbjct: 117 ------LVSASHKL-------RNDVVLSTRIIAMYSAC-------GSPSDSRGVFDAAKE 156
Query: 137 KDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAMDQFTFGSVLTACGGLLALEEGKQ 195
KD + +++G +N L R+AI LF E+ LA D FT V AC G+ +E G+
Sbjct: 157 KDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEA 216
Query: 196 IHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGC 255
+HA ++ + FVG+AL+ MY KC ++ A VF TM +N+VSW +++ +NG
Sbjct: 217 VHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGG 276
Query: 256 SEEAVKIFCNM---QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITV 312
E +F + + G+ PD T+ +VI +CA + + G HG + G+ +TV
Sbjct: 277 FGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTV 336
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML-SHG 371
+N+LV Y KCG + ++ LF+ ++ VSW ++ GY+K G +L ++M
Sbjct: 337 NNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEK 396
Query: 372 LKPDEVTLIGVLSACS 387
++ +EVT++ VL ACS
Sbjct: 397 VRVNEVTVLNVLPACS 412
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 183/400 (45%), Gaps = 35/400 (8%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
+N L+SG++ + DA+ ++ +L T + + V+LG +H
Sbjct: 162 YNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALA 221
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
LK G S FVG+ L+ MY K G + A + F+ + +N+V
Sbjct: 222 LKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLV------------------- 262
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL---EGLAMDQFTFGSVLTACG 185
SW +++ +NG E +F+ + + EGL D T +V+ AC
Sbjct: 263 ------------SWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACA 310
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
+ + G +H + + V V ++LVDMY KC + A ++F KNVVSW
Sbjct: 311 AVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNT 370
Query: 246 MLVGYGQNGCSEEAVKIFCNMQR-NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++ GY + G ++ MQR + ++ T+ +V+ +C+ L + HG +
Sbjct: 371 IIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRH 430
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G + V+NA V Y KC +++ + R+F M + SW AL+ +A+ G +++DLF
Sbjct: 431 GFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLF 490
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
M+ G+ PD T+ +L AC+R + G+ M++
Sbjct: 491 LVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLR 530
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 142/285 (49%), Gaps = 15/285 (5%)
Query: 176 TFGSVLTACGGLLALEEGKQIHAFI-----IRNDHKDNVFVGSALVDMYCKCKSIKYAES 230
G +L ACG + G+++HA + +RND V + + ++ MY C S +
Sbjct: 94 AIGILLRACGHHKNIHVGRKVHALVSASHKLRND----VVLSTRIIAMYSACGSPSDSRG 149
Query: 231 VFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLA 289
VF K++ + A+L GY +N +A+ +F + + PD+FTL V +CA +A
Sbjct: 150 VFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVA 209
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
+E G H +L G S V NAL+ YGKCG +E + ++F M R+ VSW +++
Sbjct: 210 DVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMY 269
Query: 350 GYAKFGKANETIDLFEKML---SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY 406
++ G E +F+++L GL PD T++ V+ AC+ G V G + K
Sbjct: 270 ACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFK-L 328
Query: 407 GIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
GI ++D+ S+ G L EA++ + M + + W T++
Sbjct: 329 GITEEVTVNNSLVDMYSKCGYLGEARALFD-MNGGKNVVSWNTII 372
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D WN++I+G+ HG A++++ LM G G TF +LI + V G +
Sbjct: 668 DEAVWNVIIAGYGIHGHGLKAIELFELMQNKG-GRPDSFTFLGVLIACNHAGLVTEGLKY 726
Query: 65 HGHILK-FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEK 106
G + +G + + +VDM + G + +A + +E+P++
Sbjct: 727 LGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDE 769
>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Vitis vinifera]
Length = 594
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 249/600 (41%), Positives = 368/600 (61%), Gaps = 32/600 (5%)
Query: 49 LIMSSSR-RCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKN 107
L+ SS+R R G H I++ G + + L++MY+K GL
Sbjct: 26 LLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGL--------------- 70
Query: 108 IVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL 167
VE +R+LF M + +SW TM+ QNG +A+ LF +M+
Sbjct: 71 ----------------VESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQK 114
Query: 168 EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY 227
EG + +FT SV+ AC + E KQ+H F ++ NVFVG+AL+D+Y KC +K
Sbjct: 115 EGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKD 174
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN 287
A VF M ++ V+W++M+ GY QN EEA+ +F Q G+E + FT+ S +S+CA
Sbjct: 175 ANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAA 234
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
A+L EG Q S TG+ S I V ++L+ Y KCG IE+++ +F+ + ++ V W A+
Sbjct: 235 RAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAI 294
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYG 407
+SG+++ ++ E + FEKM G+ P+++T I VLSACS GLVEKGR YF++M++ +
Sbjct: 295 LSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHN 354
Query: 408 IRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAA 467
+ P HY+CM+DIL RAG L EAK FI++MPF A W +LL+SCRI+ N+E+ + AA
Sbjct: 355 VSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLELAEVAA 414
Query: 468 ESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF 527
+ L E++P+N ++VLLS+IYA+ +W+ V++ R ++E +K+ G SWI+ K +VH F
Sbjct: 415 KHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKKERGKSWIEIKHKVHSF 474
Query: 528 SADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAF 587
+ + P +IY +LE L +M K GY LHDVE S K ++L HHSEKLA+ F
Sbjct: 475 MVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESRKQELLRHHSEKLALTF 534
Query: 588 GLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G++ +P G PIR++KNLR+C DCH+ K S IT+REI+VRD RFH FKNG CSCG+FW
Sbjct: 535 GIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDTNRFHHFKNGYCSCGEFW 594
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/297 (35%), Positives = 163/297 (54%), Gaps = 32/297 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP VSWN ++ H +G A+ ++ M K+G + S T S+++ +++ CV
Sbjct: 81 MPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEG-TSCSEFTVSSVVCACAAKCCVFE 139
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+Q+HG LK S VFVG+ L+D+YAK GL+ DA N+V
Sbjct: 140 CKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDA----------NLV----------- 178
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
F M ++ ++W++M+ G +QN L EA+ LF + GL +QFT S
Sbjct: 179 ----------FECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSA 228
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+AC AL EGKQ+ A + N+FV S+L+DMY KC I+ A +VF ++ KNV
Sbjct: 229 LSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNV 288
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
V W A+L G+ ++ S EA+ F MQ+ GI P+D T SV+S+C++L +E+G ++
Sbjct: 289 VLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKY 345
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 250/643 (38%), Positives = 382/643 (59%), Gaps = 29/643 (4%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL--GRQIH 65
SWN +I+ A G +A++ ++ + K GL +R +F I S S C DL GR H
Sbjct: 1109 SWNSVIADLARGGDSVEALRAFSSLRKLGLIP-TRSSFPCT-IKSCSALC-DLVSGRMSH 1165
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
FGF + +FV S L+DMY+K G + DA+ FDE+P +N+V + +MITG ++ +
Sbjct: 1166 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 1225
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
+ LF+ ++++ +++G + +D SVL+AC
Sbjct: 1226 NALLLFKDFLEEET---------EVEDG--------------NNVPLDSVVMVSVLSACS 1262
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
+ + +H F+++ ++ VG+ L+D Y KC ++ VF M K+ +SW +
Sbjct: 1263 RVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNS 1322
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRN-GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
M+ Y Q+G S EA+++F M R+ G+ + TL +V+ +CA+ +L G H + +
Sbjct: 1323 MIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKM 1382
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
L + V +++ Y KCG +E + + F+ M ++ SWTA+V+GY G+A E +D+F
Sbjct: 1383 DLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIF 1442
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
KM+ G+KP+ +T + VL+ACS AGLVE+G H+F M +Y I P +HY CM+D+ R
Sbjct: 1443 YKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGR 1502
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG L EA + I +M PD + W +LL +CRIH NV++G+ AA+ L ELDP N YVLL
Sbjct: 1503 AGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLL 1562
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S++YA G+W V ++R M+ + + K PG S ++ K RVH+F D P+ + IY L
Sbjct: 1563 SNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYL 1622
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
EKL ++ K GYVP+M+SVLHDV+ EK +L HSEKLA+AFG++ PG I ++KNL
Sbjct: 1623 EKLTLELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNL 1682
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RVC DCH K ISK+ R+ +VRD+ RFH FK+G CSCGD+W
Sbjct: 1683 RVCGDCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 1725
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 195/401 (48%), Gaps = 62/401 (15%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
RQIH I++ G + + L+ +Y+ G I Y +
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRI----------------AYAIL------- 80
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
LF +++ + +W +I NGL +A+ L++ M +G+A D+FTF V+
Sbjct: 81 --------LFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVI 132
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM------ 235
AC L+++ GK +H +I+ +VFV + L+D Y KC ++A VF M
Sbjct: 133 KACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVV 192
Query: 236 AW-------------------------KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
+W KNVVSWTAM+ GY +N EEA+++F MQ
Sbjct: 193 SWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAEN 252
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
I P+++T+ S+I +C + L G H ++ + + + AL+ Y KCG+I+D+
Sbjct: 253 IFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAI 312
Query: 331 RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
+F M + +W ++++ G E ++LF +M +KPD +T IGVL AC
Sbjct: 313 EVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIK 372
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEA 431
V++G YF M + YGI PI +HY CM ++ +R+ L+EA
Sbjct: 373 NVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEA 413
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 192/330 (58%), Gaps = 2/330 (0%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
+WNL+I + +G A+ +Y M+ G+ + TF ++ ++ +DLG+ +HG
Sbjct: 92 TWNLIIRANTINGLSEQALMLYKNMVCQGIA-ADKFTFPFVIKACTNFLSIDLGKVVHGS 150
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
++K+GF VFV + L+D Y K G A + F+++ +N+V + T+I+GL+ G ++E+
Sbjct: 151 LIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEA 210
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
RR+F + K+ +SWT MI G ++N EA++LF+ M+ E + +++T S++ AC +
Sbjct: 211 RRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEM 270
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
L G+ IH + I+N + V++G+AL+DMY KC SIK A VF TM K++ +W +M+
Sbjct: 271 GILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMI 330
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR-SLVTGL 306
G +G +EA+ +F M+R ++PD T V+ +C ++ +++EG + R + G+
Sbjct: 331 TSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGI 390
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
+ Y + N++++ + E+
Sbjct: 391 APIPEHYECMTELYARSNNLDEAFKSTKEV 420
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 182/361 (50%), Gaps = 47/361 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGL----GN---LSRITFSTMLIMSS 53
+P + VSW +I+G+ + ++A+ ++ L++ GN L + ++L S
Sbjct: 1203 IPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACS 1262
Query: 54 SRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNT 113
+ +HG ++K GF + VG+ L+D YAK G +K+ FD + EK+ + +N+
Sbjct: 1263 RVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNS 1322
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
MI + GL E+ +F GM +R G+ +
Sbjct: 1323 MIAVYAQSGLSGEALEVFHGM------------------------------VRHVGVRYN 1352
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
T +VL AC AL GK IH +I+ D + NV VG++++DMYCKC ++ A+ F
Sbjct: 1353 AVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFD 1412
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE 293
M KNV SWTAM+ GYG +G ++EA+ IF M R G++P+ T SV+++C++ +EE
Sbjct: 1413 RMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEE 1472
Query: 294 GTQF-----HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTAL 347
G + H + G+ + +V +G+ G + +++ L M ++ D V W +L
Sbjct: 1473 GWHWFNAMKHKYDIEPGIEHY----GCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSL 1528
Query: 348 V 348
+
Sbjct: 1529 L 1529
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 182/358 (50%), Gaps = 21/358 (5%)
Query: 120 RRGLVEESRRL---FRGMKDKDSI-SWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
RR V S L F DK ++ SW ++I L + G EA+ F +R GL +
Sbjct: 1084 RRRPVSLSSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRS 1143
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
+F + +C L L G+ H + ++FV SAL+DMY KC +K A ++F +
Sbjct: 1144 SFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEI 1203
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR--------NGIEPDDFTLGSVISSCAN 287
+NVVSWT+M+ GY QN ++ A+ +F + N + D + SV+S+C+
Sbjct: 1204 PLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSR 1263
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
++ HG + G I V N L+ Y KCG S ++F+ M +D++SW ++
Sbjct: 1264 VSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSM 1323
Query: 348 VSGYAKFGKANETIDLFEKMLSH-GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK-- 404
++ YA+ G + E +++F M+ H G++ + VTL VL AC+ AG + G+ + ++K
Sbjct: 1324 IAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMD 1383
Query: 405 -EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
EY + T +ID+ + GR+E AK ++M + W +++ +HG +
Sbjct: 1384 LEYNVCV----GTSIIDMYCKCGRVEMAKKTFDRMK-EKNVKSWTAMVAGYGMHGRAK 1436
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 153/318 (48%), Gaps = 42/318 (13%)
Query: 194 KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQN 253
+QIHA IIR+ ++ + L+ +Y I YA +F + +W ++ N
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVS 313
G SE+A+ ++ NM GI D FT VI +C N S++ G HG + G + V
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 314 NALVTFYGK-------------------------------CGNIEDSHRLFNEMNVRDEV 342
N L+ FY K CG+++++ R+F+E+ ++ V
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
SWTA+++GY + + E ++LF++M + + P+E T++ ++ AC+ G++ GR +
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283
Query: 403 VK---EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+K E G+ T +ID+ S+ G +++A MP W ++++S +HG
Sbjct: 284 IKNCIEIGVY----LGTALIDMYSKCGSIKDAIEVFETMP-RKSLPTWNSMITSLGVHG- 337
Query: 460 VEIGKWAAESLLELDPYN 477
+G+ A E++ N
Sbjct: 338 --LGQEALNLFSEMERVN 353
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 32/193 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + VSW +I+G+ + +A++++ M + + + T +++ + + L
Sbjct: 217 IPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFP-NEYTMVSLIKACTEMGILTL 275
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR IH + +K V++G+ L+DMY+K G I DA F+ +P K++ +N+MIT L
Sbjct: 276 GRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGV 335
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G L +EA++LF EM + D TF V
Sbjct: 336 HG-------------------------------LGQEALNLFSEMERVNVKPDAITFIGV 364
Query: 181 LTACGGLLALEEG 193
L AC + ++EG
Sbjct: 365 LCACVHIKNVKEG 377
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/229 (18%), Positives = 96/229 (41%), Gaps = 8/229 (3%)
Query: 281 VISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD 340
++ +C N L Q H + + +GL + ++ L+ Y G I + LF ++
Sbjct: 33 LLQNCKNFKHLR---QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89
Query: 341 EVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
+W ++ G + + + L++ M+ G+ D+ T V+ AC+ ++ G+
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 401 IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
++K YG +ID + G A KM + + W T++S G++
Sbjct: 150 SLIK-YGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRV-RNVVSWTTVISGLISCGDL 207
Query: 461 EIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
+ + + E+ N S+ + + Y + + +L + M+ + +
Sbjct: 208 QEARRIFD---EIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENI 253
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 246/643 (38%), Positives = 369/643 (57%), Gaps = 32/643 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+W ++S ++ + DA+ ++ M G + +++L + LG+ I
Sbjct: 215 DAVTWTAMVSCYSENDIPEDALNTFSKMRMAG-AKPNPFVLTSVLKAAVCLSSAVLGKGI 273
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG +K + VG L+DMYAK G I DA
Sbjct: 274 HGCAVKTLCDTEPHVGGALLDMYAKCGYIEDA---------------------------- 305
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
R +F + D I W+ +I+ Q+ +A ++F M + ++F+ VL AC
Sbjct: 306 ---RTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQAC 362
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+ L+ G+QIH +I+ ++ +FVG+AL+D+Y KC++++ + +FR++ N VSW
Sbjct: 363 ANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWN 422
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++VGY Q+G +E+A+ +F M+ + T SV+ +CAN AS++ Q H +
Sbjct: 423 TIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKS 482
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
+ V N+L+ Y KCG I D+ ++F + D VSW A++SGYA G+A + ++LF
Sbjct: 483 TFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELF 542
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+M KP++VT + +LS C GLV +G F M ++ I+P DHYTC++ +L R
Sbjct: 543 NRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGR 602
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AGRL +A FI +P P + W LLSSC +H NV +GK++AE +LE++P + +YVLL
Sbjct: 603 AGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLEIEPQDETTYVLL 662
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S++YA+ G D V+ LR++MR GV+K+ G SW++ K VH FS P I A L
Sbjct: 663 SNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWVEIKGEVHAFSVGSADHPDMRIINAML 722
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
E LN K +EGYVPD++ VLHDV+ EK +ML HSE+LA+A+GL PPG PIR++KNL
Sbjct: 723 EWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNL 782
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R C DCH K ISKI QREI+VRD RFH F G CSCGD+W
Sbjct: 783 RSCLDCHTVFKVISKIVQREIVVRDINRFHHFDEGICSCGDYW 825
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 132/495 (26%), Positives = 232/495 (46%), Gaps = 39/495 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VS+ L+ G+A G +A ++ + ++G ++ +T+L + + L
Sbjct: 110 MPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREG-HEVNHFVLTTILKVLVAMDAPGL 168
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
IH K G FVGS L+D Y+ G
Sbjct: 169 TCCIHACACKLGHDRNAFVGSSLIDAYSLCGA---------------------------- 200
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
V +R +F G+ KD+++WT M++ +N + +A++ F +MR+ G + F SV
Sbjct: 201 ---VSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSV 257
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A L + GK IH ++ VG AL+DMY KC I+ A +VF + +V
Sbjct: 258 LKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDV 317
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+ W+ ++ Y Q+ +E+A ++F M R+ + P++F+L V+ +CAN+A L+ G Q H
Sbjct: 318 ILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNL 377
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ G S + V NAL+ Y KC N+E+S +F + +EVSW ++ GY + G A +
Sbjct: 378 VIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDA 437
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC--M 418
+ +F++M + + +VT VL AC+ ++ ++ K +D C +
Sbjct: 438 LSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTF---NNDTIVCNSL 494
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY-N 477
ID ++ G + +A + D + W ++S +HG + + D N
Sbjct: 495 IDTYAKCGCIRDALKVFESI-IQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPN 553
Query: 478 PASYVLLSSIYASKG 492
++V L S+ S G
Sbjct: 554 DVTFVALLSVCGSTG 568
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 184/379 (48%), Gaps = 38/379 (10%)
Query: 33 LKDGLGNLSRITFSTMLIMSSSRRCVD-----LGRQIHGHILKFGFGSYV--FVGSPLVD 85
L D L +L+ + +RC+ GR +H +++ G + + F + L++
Sbjct: 33 LDDELASLALPKLDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLN 92
Query: 86 MYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTM 145
+YAKLG + A RRLF GM +++ +S+ T+
Sbjct: 93 LYAKLGPLAAA-------------------------------RRLFDGMPERNMVSFVTL 121
Query: 146 ITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH 205
+ G G EA LFR ++ EG ++ F ++L + A IHA + H
Sbjct: 122 VQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGH 181
Query: 206 KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCN 265
N FVGS+L+D Y C ++ +A VF + WK+ V+WTAM+ Y +N E+A+ F
Sbjct: 182 DRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSK 241
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M+ G +P+ F L SV+ + L+S G HG ++ T + V AL+ Y KCG
Sbjct: 242 MRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGY 301
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
IED+ +F + D + W+ L+S YA+ + + ++F +M+ + P+E +L GVL A
Sbjct: 302 IEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQA 361
Query: 386 CSRAGLVEKGRHYFEIMVK 404
C+ ++ G+ +++K
Sbjct: 362 CANVAFLDLGQQIHNLVIK 380
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 204/399 (51%), Gaps = 41/399 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D + W+ LIS +A A +++ M++ + + + S +L ++ +DL
Sbjct: 312 IPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVP-NEFSLSGVLQACANVAFLDL 370
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIH ++K G+ S +FVG+ L+D+YAK +N+
Sbjct: 371 GQQIHNLVIKLGYESELFVGNALMDVYAKC---------------RNM------------ 403
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
E S +FR ++D + +SW T+I G Q+G +A+ +F+EMR + Q TF SV
Sbjct: 404 ----ENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSV 459
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC +++ QIH+ I ++ ++ V ++L+D Y KC I+ A VF ++ +V
Sbjct: 460 LRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDV 519
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQFHG 299
VSW A++ GY +G + +A+++F M ++ +P+D T +++S C + + +G + F+
Sbjct: 520 VSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNS 579
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM-NVRDEVSWTALVSGYAKFGKAN 358
++ + + +V G+ G + D+ + ++ + + W AL+S N
Sbjct: 580 MTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVV--HKN 637
Query: 359 ETIDLF--EKMLSHGLKP-DEVTLIGVLSACSRAGLVEK 394
+ F EK+L ++P DE T + + + + AG++++
Sbjct: 638 VALGKFSAEKVLE--IEPQDETTYVLLSNMYAAAGILDQ 674
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 235/648 (36%), Positives = 374/648 (57%), Gaps = 33/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +SWN +++ + G D +K+ +L+ G ++ +TF++ L S+ C+
Sbjct: 1109 MTERDLISWNSMMACYVQDGKCLDGLKILAELLQMG-KVMNHVTFASALAACSNPECLIE 1167
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+ +H I+ GF ++ VG+ LV MY KLG++
Sbjct: 1168 SKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMM-------------------------- 1201
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
E++++ + M D ++W +I G +N EA+ ++ +R +G+ + T SV
Sbjct: 1202 -----EAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSV 1256
Query: 181 LTACGGLL-ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
L AC L+ G IHA I+ + + +V ++L+ MY KC + + +F + K+
Sbjct: 1257 LGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKS 1316
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
++W AM+ +GC EEA+KIF M+ G+ D F+ +++ ANLA LEEG Q HG
Sbjct: 1317 PITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHG 1376
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ G S + V+NA + YGKCG + D ++ + R +SW L+S +A+ G +
Sbjct: 1377 LVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQK 1436
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ F +ML G KPD VT + +LSAC+ GLV++G Y++ M +E+G+ P +H C+I
Sbjct: 1437 ARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCII 1496
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L R+GRL A+ FI +MP PP+ + W +LL++CRIHGN+E+ + AE LLELDP + +
Sbjct: 1497 DLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDS 1556
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+YVL S++ A+ GKW+ V LR+ M ++K P CSW+K K +VH F + P + +
Sbjct: 1557 AYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASR 1616
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
I A+L +L + + GYVPD S LHD++ +K L +HSE+LA+AFGL+ P +R
Sbjct: 1617 ISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLR 1676
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ KNLRVC DCH+ K++S I R+I++RD RFH F G+CSCGD+W
Sbjct: 1677 IFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1724
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 178/520 (34%), Positives = 282/520 (54%), Gaps = 33/520 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP VSW ++SG++ +G A +++ M G+ ++ T+ + L +S RC+D+
Sbjct: 91 MPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGV-KANQFTYGSALRACTSLRCLDM 149
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+ G I K F +FV S LVD ++K G + DA F + E+++V +N MI G
Sbjct: 150 GIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAV 209
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+G ++S +FR +M+ G GL D +T GSV
Sbjct: 210 QGFADDSFCMFR-----------SMLRG--------------------GLVPDCYTLGSV 238
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A L QIH I + + V L++ Y K S++ A+ + + M K++
Sbjct: 239 LRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDL 298
Query: 241 VSWTAMLVGYGQNGC-SEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
S TA++ GY G S +A+ +F M + I DD L S+++ CANLAS GTQ H
Sbjct: 299 FSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHA 358
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+L + + NAL+ Y K G IED+ R F+EM ++ +SWT+L+SGYAK G +
Sbjct: 359 FALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHM 418
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ L++KM S G KP++VT + +L ACS GL +G F MV +Y I+P +HY+CM+
Sbjct: 419 AVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMV 478
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+ +R G LEEA + + K+ +A W +L + I+G + +GK AA +L + P N
Sbjct: 479 DLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSV 538
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIK 519
+YV+L+SIY++ G WD ++R+ M E+ +K+ G S+ +
Sbjct: 539 NYVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAGYSFFQ 578
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 143/474 (30%), Positives = 228/474 (48%), Gaps = 62/474 (13%)
Query: 39 NLSRITFSTMLIMSSSRR------------CVD-----LGRQIHGHILKFGFGSYVFVGS 81
NL R+ + L+ S+ R C+D G IH H++ GFGS + + +
Sbjct: 10 NLGRLAEALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNT 69
Query: 82 PLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSIS 141
L+ Y K+G + A R +F GM ++ +S
Sbjct: 70 KLIIFYVKVGDVIAA-------------------------------RNVFDGMPERSVVS 98
Query: 142 WTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFII 201
WT M++G QNG +A LF +MR G+ +QFT+GS L AC L L+ G Q+ I
Sbjct: 99 WTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQ 158
Query: 202 RNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVK 261
+ +N+FV SALVD + KC ++ A +F TM ++VVSW AM+ GY G ++++
Sbjct: 159 KGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFC 218
Query: 262 IFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYG 321
+F +M R G+ PD +TLGSV+ + A L Q HG G S+ V+ L+ Y
Sbjct: 219 MFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYA 278
Query: 322 KCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG-KANETIDLFEKMLSHGLKPDEVTLI 380
K G++ + L M +D S TAL++GYA G + + +DLF++M + D+V L
Sbjct: 279 KNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILC 338
Query: 381 GVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD--HYTCMIDILSRAGRLEEAKSFINKM 438
+L+ C+ G +K +P +D +ID+ +++G +E+AK ++M
Sbjct: 339 SMLNICANLASFALGTQIHAFALK---YQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEM 395
Query: 439 PFPPDAIGWATLLSSCRIHGNVEIGKWAAESL---LELDPYNPASYVLLSSIYA 489
+ I W +L+S HG + A SL +E + P LS ++A
Sbjct: 396 E-EKNVISWTSLISGYAKHGYGHM----AVSLYKKMESKGFKPNDVTFLSLLFA 444
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/494 (26%), Positives = 239/494 (48%), Gaps = 43/494 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + SW+ ++SG+ G +AV ++ M G+ + S + S S D
Sbjct: 805 MRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADE 864
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+HG ++K G V+VG+ LV Y +GL+Y+A++
Sbjct: 865 GFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQK---------------------- 902
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
LF M D + +SWT+++ G +G E +++++ MR EG++ +Q TF +V
Sbjct: 903 ---------LFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATV 953
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
++CG L G Q+ II+ +D+V V ++L+ M+ S++ A VF M ++
Sbjct: 954 TSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDI 1013
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SW AM+ Y +G E+++ F M+ E + TL S++S C+++ +L+ G HG
Sbjct: 1014 ISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGL 1073
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ GL S + + N L+T Y + G ED+ +F M RD +SW ++++ Y + GK +
Sbjct: 1074 VVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDG 1133
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY---TC 417
+ + ++L G + VT L+ACS + + + +++ + HD
Sbjct: 1134 LKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALII----VAGFHDFLIVGNA 1189
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL-LELDPY 476
++ + + G + EAK + MP PD + W L+ H E A ++ L +
Sbjct: 1190 LVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALIGG---HAENEEPNEAVKAYKLIREKG 1245
Query: 477 NPASYVLLSSIYAS 490
PA+Y+ + S+ +
Sbjct: 1246 IPANYITMVSVLGA 1259
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 194/389 (49%), Gaps = 36/389 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD- 59
MP H+ VSW L+ G++ G+ + + VY M ++G+ ++ TF+T + SS D
Sbjct: 907 MPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSG-NQNTFAT--VTSSCGLLEDQ 963
Query: 60 -LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
LG Q+ GHI+++GF V V + L+ M++
Sbjct: 964 VLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSS-------------------------- 997
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
VEE+ +F M + D ISW MI+ +GL RE++ F MR + T
Sbjct: 998 -----VEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLS 1052
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
S+L+ C + L+ G+ IH +++ NV + + L+ +Y + + AE VF+ M +
Sbjct: 1053 SLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTER 1112
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+++SW +M+ Y Q+G + +KI + + G + T S +++C+N L E H
Sbjct: 1113 DLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVH 1172
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
+V G F+ V NALVT YGK G + ++ ++ M D V+W AL+ G+A+ + N
Sbjct: 1173 ALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPN 1232
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACS 387
E + ++ + G+ + +T++ VL ACS
Sbjct: 1233 EAVKAYKLIREKGIPANYITMVSVLGACS 1261
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 187/351 (53%), Gaps = 13/351 (3%)
Query: 108 IVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL 167
I NT+I + G +E +R +F M+ ++ SW+TM++G ++ GL EA+ LF +M
Sbjct: 779 IFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWG 838
Query: 168 EGLAMDQFTFGSVLTAC--GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI 225
G+ + F S++TAC G +A +EG Q+H F+++ +V+VG+ALV Y +
Sbjct: 839 LGVEPNGFMVASLITACSRSGYMA-DEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLV 897
Query: 226 KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
A+ +F M NVVSWT+++VGY +G E + ++ M++ G+ + T +V SSC
Sbjct: 898 YNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSC 957
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
L G Q G + G ++V+N+L++ + ++E++ +F+ MN D +SW
Sbjct: 958 GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWN 1017
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE 405
A++S YA G E++ F M + + TL +LS CS ++ GR ++VK
Sbjct: 1018 AMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVK- 1076
Query: 406 YGIRPIHDHYTCMIDIL----SRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
G+ D C+ + L S AGR E+A+ M D I W ++++
Sbjct: 1077 LGL----DSNVCICNTLLTLYSEAGRSEDAELVFQAMT-ERDLISWNSMMA 1122
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 146/269 (54%), Gaps = 7/269 (2%)
Query: 193 GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
GK +HAF I +F + L++MY K +I++A VF M +N SW+ ML GY +
Sbjct: 763 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 822
Query: 253 NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASL-EEGTQFHGRSLVTGLISFIT 311
G EEAV +FC M G+EP+ F + S+I++C+ + +EG Q HG + TG++ +
Sbjct: 823 VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVY 882
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG 371
V ALV FYG G + ++ +LF EM + VSWT+L+ GY+ G E ++++++M G
Sbjct: 883 VGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEG 942
Query: 372 LKPDEVTLIGVLSACSRAGLVEKGRHYFEIM--VKEYGIRPIHDHYTCMIDILSRAGRLE 429
+ ++ T V S+C GL+E ++++ + +YG +I + S +E
Sbjct: 943 VSGNQNTFATVTSSC---GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVE 999
Query: 430 EAKSFINKMPFPPDAIGWATLLSSCRIHG 458
EA + M D I W ++S+ HG
Sbjct: 1000 EACYVFDHMN-ECDIISWNAMISAYAHHG 1027
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 89/177 (50%), Gaps = 7/177 (3%)
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
+ + S G H +V + I +N L+ Y K GNIE + +F+EM R+E SW+
Sbjct: 755 SEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWS 814
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG-LVEKGRHYFEIMVK 404
++SGY + G E + LF +M G++P+ + +++ACSR+G + ++G +VK
Sbjct: 815 TMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVK 874
Query: 405 EYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
GI + D Y T ++ G + A+ +MP + + W +L+ GN
Sbjct: 875 T-GI--LGDVYVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLMVGYSDSGN 927
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/680 (35%), Positives = 390/680 (57%), Gaps = 39/680 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + + WN I + + V+++ M S + T I+ + C +
Sbjct: 735 MPNPEALLWNEAIILNLQSEKLQKGVELFRKM------QFSFLKAETATIVRVLQACGKM 788
Query: 61 G-----RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
G +QIHG++ +FG S V + +PL+ MY+K G + A+R FD + +N +N+MI
Sbjct: 789 GALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMI 848
Query: 116 TGLLRRGLVEESRRLFRGMKDKDS----ISWTTMITGLMQNGLEREAIDLFREMRLEGLA 171
+ G + ++ LF ++ D ++W +++G +G + E +++ + M+ EG
Sbjct: 849 SSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFK 908
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
+ + SVL A L L GK+ H +++RN +V+VG++L+DMY K S+ A++V
Sbjct: 909 PNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAV 968
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS-------- 283
F M +N+ +W +++ GY G E+A+++ M++ GI+PD T +IS
Sbjct: 969 FDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCA 1028
Query: 284 ----------------SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIE 327
+CA+L+ L++G + H S+ G I + V+ AL+ Y K +++
Sbjct: 1029 RKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLK 1088
Query: 328 DSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS 387
++H++F + + SW ++ G+A FG E I +F +M G+ PD +T +LSAC
Sbjct: 1089 NAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACK 1148
Query: 388 RAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGW 447
+GL+ +G YF+ M+ +Y I P +HY CM+D+L RAG L+EA I+ MP PDA W
Sbjct: 1149 NSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIW 1208
Query: 448 ATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREK 507
LL SCRIH N+ + AA++L +L+P N A+Y+L+ ++Y+ +W+ + LR M
Sbjct: 1209 GALLGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAA 1268
Query: 508 GVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDV 567
GVR SWI+ RVH+FS+D+ P + +IY EL +L +M K GYVPD++ V ++
Sbjct: 1269 GVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNM 1328
Query: 568 ELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILV 627
+ EK K+L H+EKLAI +GL+ + G PIRV+KN R+CSDCH+A KYIS + RE+ +
Sbjct: 1329 DEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFL 1388
Query: 628 RDAVRFHLFKNGECSCGDFW 647
RD VRFH F+ G+CSC DFW
Sbjct: 1389 RDGVRFHHFREGKCSCNDFW 1408
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 130/545 (23%), Positives = 224/545 (41%), Gaps = 125/545 (22%)
Query: 7 VSWNLLISG-HASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIH 65
+ WN + +S GS++ ++V+ + G+ S + +S L + + LG +IH
Sbjct: 639 LKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEV-YSVALKTCTRVMDIWLGMEIH 697
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
G ++K GF V++ L++ Y + + A + F E+P +++N I L
Sbjct: 698 GCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAII------LNL 751
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
+S +L +G ++LFR+M+ L + T VL ACG
Sbjct: 752 QSEKLQKG-------------------------VELFRKMQFSFLKAETATIVRVLQACG 786
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM---------- 235
+ AL KQIH ++ R +V + + L+ MY K ++ A VF +M
Sbjct: 787 KMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNS 846
Query: 236 -------------AWK------------NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
AW ++V+W +L G+ +G EE + I MQ G
Sbjct: 847 MISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEG 906
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
+P+ ++ SV+ + + L L G + HG L G + V +L+ Y K ++ +
Sbjct: 907 FKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQ 966
Query: 331 RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS------ 384
+F+ M R+ +W +LVSGY+ G + + L +M G+KPD VT G++S
Sbjct: 967 AVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWG 1026
Query: 385 ------------------ACSRAGLVEKGRH-------------------YFEIMVKEYG 407
AC+ L++KG+ ++ K
Sbjct: 1027 CARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSS 1086
Query: 408 IRPIHD-----------HYTCMIDILSRAGRLEEAKSFINKMP---FPPDAIGWATLLSS 453
++ H + CMI + G +EA S N+M PDAI + LLS+
Sbjct: 1087 LKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSA 1146
Query: 454 CRIHG 458
C+ G
Sbjct: 1147 CKNSG 1151
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 176/358 (49%), Gaps = 9/358 (2%)
Query: 159 IDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDM 218
+++F+E+ +G+ D + L C ++ + G +IH +I+ +V++ AL++
Sbjct: 659 LEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNF 718
Query: 219 YCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
Y +C ++ A VF M + W ++ Q+ ++ V++F MQ + ++ + T+
Sbjct: 719 YGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATI 778
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
V+ +C + +L Q HG GL S +++ N L++ Y K G +E + R+F+ M
Sbjct: 779 VRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMEN 838
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
R+ SW +++S YA G N+ LF ++ S +KPD VT +LS G E+ +
Sbjct: 839 RNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNI 898
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRL---EEAKSFINKMPFPPDAIGWATLLSSCR 455
+ M E G +P T ++ +S G L +E ++ + F D +L+
Sbjct: 899 LQRMQGE-GFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYV 957
Query: 456 IHGNVEIGKWAAESLLE-LDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKD 512
+ ++ +A+++ + + N ++ L S Y+ KG ++ +L M ++G++ D
Sbjct: 958 KNHSLX----SAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPD 1011
>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Brachypodium distachyon]
Length = 689
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/645 (37%), Positives = 366/645 (56%), Gaps = 36/645 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSS--SRRCVDLGRQI 64
VS+ ISG A H A+ + ML+ GL + TF + ++ RC +G QI
Sbjct: 77 VSFTAFISGAAQHARPLAALSAFAAMLRVGL-RPNDFTFPSAFKAAACAPPRCSTVGPQI 135
Query: 65 HGHILKFGF-GSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
H L+FG+ FV +DMY K G + GL
Sbjct: 136 HALALRFGYLPGDPFVSCAAMDMYFKTGCL----------------------------GL 167
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
+RRLF M +++ I+W ++T + +G E + +R G + + + A
Sbjct: 168 ---ARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAYFGLREAGGMPNVVSVCAFFNA 224
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C G + L G+Q H F++ +V V +A+VD Y KC+ A +VF M +N VSW
Sbjct: 225 CAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSW 284
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
+M+V Y Q+G E+A+ ++ + G EP DF + SV+++CA L L G H ++
Sbjct: 285 CSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVR 344
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
+ + + I V++ALV YGKCG +ED+ ++F +M R+ V+W A++ GYA G A + +
Sbjct: 345 SCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAV 404
Query: 364 FEKML-SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL 422
F+ M+ S G P+ +TL+ V++ACSR GL + G F+ M + +G+ P +HY C++D+L
Sbjct: 405 FDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYELFDTMRERFGVEPRTEHYACVVDLL 464
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYV 482
RAG E A I +MP P W LL +C++HG E+G+ A+E L ELDP + ++V
Sbjct: 465 GRAGMEERAYEIIQRMPMRPSISVWGALLGACKMHGKTELGRIASEKLFELDPQDSGNHV 524
Query: 483 LLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYA 542
LLS++ AS G+W + +R+ M+ G++K+PGCSWI +K+ VH+F A D + +I A
Sbjct: 525 LLSNMLASAGRWAEATDVRKEMKNVGIKKEPGCSWITWKNVVHVFYAKDTKHDRNSEIQA 584
Query: 543 ELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVK 602
L KL ++M GY+PD L+DVE EK + HSEKLA+AFGL+ IPP +PIR+ K
Sbjct: 585 LLAKLKKQMQASGYMPDTQYSLYDVEEEEKETEVFQHSEKLALAFGLIHIPPSVPIRITK 644
Query: 603 NLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
NLR+C DCH A K++S I REI+VRD RFH FK ECSC D+W
Sbjct: 645 NLRICVDCHRAFKFVSGIVGREIIVRDNNRFHYFKQFECSCKDYW 689
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 87/171 (50%), Gaps = 6/171 (3%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + VSW +I +A HG+ DA+ VY + ++ + S++L + ++
Sbjct: 276 MRVRNSVSWCSMIVAYAQHGAEEDALAVY-MGARNTGEEPTDFMVSSVLTTCAGLLGLNF 334
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +H ++ + +FV S LVDMY K G + DA++ F ++PE+N+V +N MI G
Sbjct: 335 GRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAH 394
Query: 121 RGLVEESRRLFRGM-----KDKDSISWTTMITGLMQNGLEREAIDLFREMR 166
G + + +F M + I+ +IT + GL ++ +LF MR
Sbjct: 395 IGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYELFDTMR 445
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 113/255 (44%), Gaps = 5/255 (1%)
Query: 210 FVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN 269
F+ + LV++Y K A S + VVS+TA + G Q+ A+ F M R
Sbjct: 46 FICAHLVNLYSKLDLPAAAASALASDPNPTVVSFTAFISGAAQHARPLAALSAFAAMLRV 105
Query: 270 GIEPDDFTLGSVI--SSCANLASLEEGTQFHGRSLVTG-LISFITVSNALVTFYGKCGNI 326
G+ P+DFT S ++CA G Q H +L G L VS A + Y K G +
Sbjct: 106 GLRPNDFTFPSAFKAAACAPPRCSTVGPQIHALALRFGYLPGDPFVSCAAMDMYFKTGCL 165
Query: 327 EDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSAC 386
+ RLF EM R+ ++W A+++ G+ ET + + G P+ V++ +AC
Sbjct: 166 GLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAYFGLREAGGMPNVVSVCAFFNAC 225
Query: 387 SRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIG 446
+ A + G + +V G M+D + +A++ + M +++
Sbjct: 226 AGAMFLSLGEQFHGFVVT-CGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRV-RNSVS 283
Query: 447 WATLLSSCRIHGNVE 461
W +++ + HG E
Sbjct: 284 WCSMIVAYAQHGAEE 298
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 79/176 (44%), Gaps = 7/176 (3%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+WN +I G+A G +A+ V++ M++ G + + IT ++ S
Sbjct: 377 MPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKD 436
Query: 61 GRQIHGHIL-KFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEK-NIVMYNTMITGL 118
G ++ + +FG + +VD+ + G+ A +P + +I ++ ++
Sbjct: 437 GYELFDTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALLGAC 496
Query: 119 LRRGLVE----ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL 170
G E S +LF + +DS + + L G EA D+ +EM+ G+
Sbjct: 497 KMHGKTELGRIASEKLFE-LDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGI 551
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 250/643 (38%), Positives = 382/643 (59%), Gaps = 29/643 (4%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL--GRQIH 65
SWN +I+ A G +A++ ++ + K GL +R +F I S S C DL GR H
Sbjct: 1982 SWNSVIADLARGGDSVEALRAFSSLRKLGLIP-TRSSFPCT-IKSCSALC-DLVSGRMSH 2038
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
FGF + +FV S L+DMY+K G + DA+ FDE+P +N+V + +MITG ++ +
Sbjct: 2039 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 2098
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
+ LF+ ++++ +++G + +D SVL+AC
Sbjct: 2099 NALLLFKDFLEEET---------EVEDG--------------NNVPLDSVVMVSVLSACS 2135
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
+ + +H F+++ ++ VG+ L+D Y KC ++ VF M K+ +SW +
Sbjct: 2136 RVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNS 2195
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRN-GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
M+ Y Q+G S EA+++F M R+ G+ + TL +V+ +CA+ +L G H + +
Sbjct: 2196 MIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKM 2255
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
L + V +++ Y KCG +E + + F+ M ++ SWTA+V+GY G+A E +D+F
Sbjct: 2256 DLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIF 2315
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
KM+ G+KP+ +T + VL+ACS AGLVE+G H+F M +Y I P +HY CM+D+ R
Sbjct: 2316 YKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGR 2375
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG L EA + I +M PD + W +LL +CRIH NV++G+ AA+ L ELDP N YVLL
Sbjct: 2376 AGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLL 2435
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S++YA G+W V ++R M+ + + K PG S ++ K RVH+F D P+ + IY L
Sbjct: 2436 SNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYL 2495
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
EKL ++ K GYVP+M+SVLHDV+ EK +L HSEKLA+AFG++ PG I ++KNL
Sbjct: 2496 EKLTLELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNL 2555
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RVC DCH K ISK+ R+ +VRD+ RFH FK+G CSCGD+W
Sbjct: 2556 RVCGDCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 2598
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 195/401 (48%), Gaps = 62/401 (15%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
RQIH I++ G + + L+ +Y+ G I Y +
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRI----------------AYAIL------- 80
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
LF +++ + +W +I NGL +A+ L++ M +G+A D+FTF V+
Sbjct: 81 --------LFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVI 132
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM------ 235
AC L+++ GK +H +I+ +VFV + L+D Y KC ++A VF M
Sbjct: 133 KACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVV 192
Query: 236 AW-------------------------KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
+W KNVVSWTAM+ GY +N EEA+++F MQ
Sbjct: 193 SWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAEN 252
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
I P+++T+ S+I +C + L G H ++ + + + AL+ Y KCG+I+D+
Sbjct: 253 IFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAI 312
Query: 331 RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
+F M + +W ++++ G E ++LF +M +KPD +T IGVL AC
Sbjct: 313 EVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIK 372
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEA 431
V++G YF M + YGI PI +HY CM ++ +R+ L+EA
Sbjct: 373 NVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEA 413
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 201/354 (56%), Gaps = 14/354 (3%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
+WNL+I + +G A+ +Y M+ G+ + TF ++ ++ +DLG+ +HG
Sbjct: 92 TWNLIIRANTINGLSEQALMLYKNMVCQGIA-ADKFTFPFVIKACTNFLSIDLGKVVHGS 150
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
++K+GF VFV + L+D Y K G A + F+++ +N+V + T+I+GL+ G ++E+
Sbjct: 151 LIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEA 210
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
RR+F + K+ +SWT MI G ++N EA++LF+ M+ E + +++T S++ AC +
Sbjct: 211 RRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEM 270
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
L G+ IH + I+N + V++G+AL+DMY KC SIK A VF TM K++ +W +M+
Sbjct: 271 GILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMI 330
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR-SLVTGL 306
G +G +EA+ +F M+R ++PD T V+ +C ++ +++EG + R + G+
Sbjct: 331 TSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGI 390
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEM-----------NVR-DEVSWTALV 348
+ Y + N++++ + E+ + R +V+WT L+
Sbjct: 391 APIPEHYECMTELYARSNNLDEAFKSTKEVGSLANSPSICFDARAKQVAWTQLL 444
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 182/363 (50%), Gaps = 47/363 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGL----GN---LSRITFSTMLIMSS 53
+P + VSW +I+G+ + ++A+ ++ L++ GN L + ++L S
Sbjct: 2076 IPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACS 2135
Query: 54 SRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNT 113
+ +HG ++K GF + VG+ L+D YAK G +K+ FD + EK+ + +N+
Sbjct: 2136 RVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNS 2195
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
MI + GL E+ +F GM +R G+ +
Sbjct: 2196 MIAVYAQSGLSGEALEVFHGM------------------------------VRHVGVRYN 2225
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
T +VL AC AL GK IH +I+ D + NV VG++++DMYCKC ++ A+ F
Sbjct: 2226 AVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFD 2285
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE 293
M KNV SWTAM+ GYG +G ++EA+ IF M R G++P+ T SV+++C++ +EE
Sbjct: 2286 RMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEE 2345
Query: 294 GTQF-----HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTAL 347
G + H + G+ + +V +G+ G + +++ L M ++ D V W +L
Sbjct: 2346 GWHWFNAMKHKYDIEPGIEHY----GCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSL 2401
Query: 348 VSG 350
+
Sbjct: 2402 LGA 2404
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 176/339 (51%), Gaps = 18/339 (5%)
Query: 136 DKDSI-SWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGK 194
DK ++ SW ++I L + G EA+ F +R GL + +F + +C L L G+
Sbjct: 1976 DKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGR 2035
Query: 195 QIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNG 254
H + ++FV SAL+DMY KC +K A ++F + +NVVSWT+M+ GY QN
Sbjct: 2036 MSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNE 2095
Query: 255 CSEEAVKIFCNMQR--------NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
++ A+ +F + N + D + SV+S+C+ ++ HG + G
Sbjct: 2096 QADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGF 2155
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
I V N L+ Y KCG S ++F+ M +D++SW ++++ YA+ G + E +++F
Sbjct: 2156 DGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHG 2215
Query: 367 MLSH-GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK---EYGIRPIHDHYTCMIDIL 422
M+ H G++ + VTL VL AC+ AG + G+ + ++K EY + T +ID+
Sbjct: 2216 MVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCV----GTSIIDMY 2271
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+ GR+E AK ++M + W +++ +HG +
Sbjct: 2272 CKCGRVEMAKKTFDRMK-EKNVKSWTAMVAGYGMHGRAK 2309
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 154/320 (48%), Gaps = 46/320 (14%)
Query: 194 KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQN 253
+QIHA IIR+ ++ + L+ +Y I YA +F + +W ++ N
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVS 313
G SE+A+ ++ NM GI D FT VI +C N S++ G HG + G + V
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 314 NALVTFYGK-------------------------------CGNIEDSHRLFNEMNVRDEV 342
N L+ FY K CG+++++ R+F+E+ ++ V
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
SWTA+++GY + + E ++LF++M + + P+E T++ ++ AC+ G++ GR +
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283
Query: 403 VK---EYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIH 457
+K E G+ Y T +ID+ S+ G +++A MP W ++++S +H
Sbjct: 284 IKNCIEIGV------YLGTALIDMYSKCGSIKDAIEVFETMP-RKSLPTWNSMITSLGVH 336
Query: 458 GNVEIGKWAAESLLELDPYN 477
G +G+ A E++ N
Sbjct: 337 G---LGQEALNLFSEMERVN 353
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 32/193 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + VSW +I+G+ + +A++++ M + + + T +++ + + L
Sbjct: 217 IPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFP-NEYTMVSLIKACTEMGILTL 275
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR IH + +K V++G+ L+DMY+K G I DA F+ +P K++ +N+MIT L
Sbjct: 276 GRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSL-- 333
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G+ +GL +EA++LF EM + D TF V
Sbjct: 334 -GV----------------------------HGLGQEALNLFSEMERVNVKPDAITFIGV 364
Query: 181 LTACGGLLALEEG 193
L AC + ++EG
Sbjct: 365 LCACVHIKNVKEG 377
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/229 (18%), Positives = 96/229 (41%), Gaps = 8/229 (3%)
Query: 281 VISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD 340
++ +C N L Q H + + +GL + ++ L+ Y G I + LF ++
Sbjct: 33 LLQNCKNFKHLR---QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89
Query: 341 EVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
+W ++ G + + + L++ M+ G+ D+ T V+ AC+ ++ G+
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 401 IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
++K YG +ID + G A KM + + W T++S G++
Sbjct: 150 SLIK-YGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRV-RNVVSWTTVISGLISCGDL 207
Query: 461 EIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
+ + + E+ N S+ + + Y + + +L + M+ + +
Sbjct: 208 QEARRIFD---EIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENI 253
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 212/438 (48%), Positives = 308/438 (70%)
Query: 210 FVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN 269
V +ALVDMY K YA VF M K+V+SWT+++ G NG EEA+++FC M+
Sbjct: 3 LVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIM 62
Query: 270 GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
GI PD + +V+S+CA L LE G Q H L +GL S ++V N+LV+ Y KCG IED+
Sbjct: 63 GIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDA 122
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
+++F+ M ++D ++WTAL+ GYA+ G+ E+++ + M++ G+KPD +T IG+L ACS A
Sbjct: 123 NKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHA 182
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
GLVE GR YF+ M + YGI+P +HY CMID+L R+G+L EAK +N+M PDA W
Sbjct: 183 GLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKA 242
Query: 450 LLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
LL++CR+HGNVE+G+ AA +L EL+P N YVLLS++Y++ GKW+ ++ RR M+ +GV
Sbjct: 243 LLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGV 302
Query: 510 RKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVEL 569
K+PGCSWI+ S+VH F ++D S P + +IY++++++ + + GYVPDM+ LHD++
Sbjct: 303 SKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDE 362
Query: 570 SEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRD 629
K L +HSEKLA+AFGLL +PPG PIR+ KNLR+C DCH A KY+S + R +++RD
Sbjct: 363 EGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRD 422
Query: 630 AVRFHLFKNGECSCGDFW 647
+ FH F+ G CSC D+W
Sbjct: 423 SNCFHHFREGACSCSDYW 440
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 137/241 (56%), Gaps = 2/241 (0%)
Query: 112 NTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLA 171
N ++ + G + + +F M DKD ISWT+++TG + NG EA+ LF EMR+ G+
Sbjct: 6 NALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIH 65
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
DQ +VL+AC L LE GKQ+HA +++ ++ V ++LV MY KC I+ A V
Sbjct: 66 PDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKV 125
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASL 291
F +M ++V++WTA++VGY QNG E++ + BM +G++PD T ++ +C++ +
Sbjct: 126 FDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAGLV 185
Query: 292 EEG-TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVS 349
E G + F V G+ ++ G+ G + ++ L N+M V+ D W AL++
Sbjct: 186 EHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLA 245
Query: 350 G 350
Sbjct: 246 A 246
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 32/190 (16%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +SW L++G +GS +A++++ M G+ + +I + +L + ++ G+Q+
Sbjct: 32 DVISWTSLVTGCVHNGSYEEALRLFCEMRIMGI-HPDQIVIAAVLSACAELTVLEFGKQV 90
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H + LK G GS + V + LV MYAK G I DA + FD + ++++ + +I
Sbjct: 91 HANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALI--------- 141
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
G QNG RE+++ + +M G+ D TF +L AC
Sbjct: 142 ----------------------VGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFAC 179
Query: 185 GGLLALEEGK 194
+E G+
Sbjct: 180 SHAGLVEHGR 189
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 20/185 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D ++W LI G+A +G +++ YN M+ G+ ITF +L S V+
Sbjct: 129 MEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGV-KPDFITFIGLLFACSHAGLVEH 187
Query: 61 GR-------QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYN 112
GR +++G +K G Y + ++D+ + G + +AK +++ + + ++
Sbjct: 188 GRSYFQSMEEVYG--IKPGPEHY----ACMIDLLGRSGKLMEAKELLNQMAVQPDATVWK 241
Query: 113 TMITGLLRRGLVEESRR----LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE 168
++ G VE R LF ++ K+++ + + G EA R M+L
Sbjct: 242 ALLAACRVHGNVELGERAANNLFE-LEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLR 300
Query: 169 GLAMD 173
G++ +
Sbjct: 301 GVSKE 305
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 255/670 (38%), Positives = 383/670 (57%), Gaps = 62/670 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLM---------------LKDGLGNLSRITF 45
MP + VSWN LISG+ + V++A K ++ M +++GL + + F
Sbjct: 73 MPERNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLF 132
Query: 46 STMLIMSSSRRCVDLGRQIHGHILKFGFGSY-------VFVGSPLVDMYAKLGLIYDAKR 98
M + V LG I + G + V + ++ Y + G + +A+
Sbjct: 133 WQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDVVARTNMISGYCQEGRLAEARE 192
Query: 99 GFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREA 158
FDE+P +N++ + TMI+G ++ G V+ +R+LF M +K+ +SWT M+ G Q G EA
Sbjct: 193 LFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQGGRIEEA 252
Query: 159 IDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDM 218
+LF M ++ + AC +A++
Sbjct: 253 SELFDAMPVKAV-----------VAC----------------------------NAMILG 273
Query: 219 YCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
+ + + A VF + K+ +W+AM+ Y + G EA+ +F MQR G++ + +L
Sbjct: 274 FGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSL 333
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
SV+S CA+LASL+ G Q H + + S + V++ L+T Y KCG++ + ++F+ +
Sbjct: 334 ISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSP 393
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
+D V W ++++GYA+ G E + +F +M S G+ D VT +GVLSACS G V++G
Sbjct: 394 KDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEI 453
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
FE M +Y + P +HY CM+D+L RAG + +A I KMP DAI W LL +CR H
Sbjct: 454 FESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHM 513
Query: 459 NVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWI 518
N+ + + AA+ LL+L+P N Y+LLS+IYASKG+W V++LRR MR K V K PGCSWI
Sbjct: 514 NMNLAEVAAKKLLQLEPKNAGPYILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWI 573
Query: 519 KYKSRVHIFSAD-DWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLN 577
+ + RVH+F+ P I LEKL+ + + GY PD S VLHDV+ EK++ L
Sbjct: 574 EVEKRVHMFTGGVSTKHPELSSIMKMLEKLDGMLREAGYYPDSSFVLHDVDEEEKVRSLG 633
Query: 578 HHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFK 637
HHSE+LA+AFGLL +P G+PIRV+KNLRVC DCH+A K I+KIT REI++RDA RFH FK
Sbjct: 634 HHSERLAVAFGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKITGREIILRDANRFHHFK 693
Query: 638 NGECSCGDFW 647
+G CSC D+W
Sbjct: 694 DGFCSCRDYW 703
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 164/400 (41%), Gaps = 72/400 (18%)
Query: 109 VMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE 168
+ YN+ I R G +E +RR+F M DK +SW +M+ G QN REA LF +M
Sbjct: 17 IAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKM--- 73
Query: 169 GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYA 228
+ N + L+ Y K + + A
Sbjct: 74 ------------------------------------PERNTVSWNGLISGYVKNRMVSEA 97
Query: 229 ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL 288
F TM +NVVSWTAM+ GY Q G EA +F M + LG +I +
Sbjct: 98 RKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNVVSWTVMLGGLI----QV 153
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNA-----LVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
++E GL + V + +++ Y + G + ++ LF+EM R+ +S
Sbjct: 154 RRIDEA---------RGLFDIMPVKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVIS 204
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
WT ++SGY + G+ + LFE M + +EV+ +L ++ G +E+ F+ M
Sbjct: 205 WTTMISGYVQNGQVDVARKLFEVM----PEKNEVSWTAMLMGYTQGGRIEEASELFDAM- 259
Query: 404 KEYGIRPIHDHYTC--MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG-NV 460
P+ C MI + G + +A+ +++ D W+ ++ G V
Sbjct: 260 ------PVKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGT-WSAMIKVYERKGFEV 312
Query: 461 EIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQL 500
E A E N S + + S+ AS DH Q+
Sbjct: 313 EALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQV 352
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 253/640 (39%), Positives = 373/640 (58%), Gaps = 35/640 (5%)
Query: 10 NLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHIL 69
N ++ +A+ G +A+ +Y M + G+G ++ T+ +L + +S G +HG ++
Sbjct: 101 NTMLRAYANAGRSYEAIDLYIYMQRMGVG-VNNFTYPFVLKVCASELGAVFGEVVHGQVV 159
Query: 70 KFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRR 129
+ GFGS +FV + LVDMYAK G I DA FD R
Sbjct: 160 RTGFGSDLFVEAALVDMYAKCGEIGDAHEVFD--------------------------RM 193
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
L R D + WT MIT Q +A+ LFR+M+ EG D+ T SV +A G L
Sbjct: 194 LIR-----DVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGD 248
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
+H + + N +V VG+++V MY KC +++ A VF M +N +SW +ML G
Sbjct: 249 GRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSG 308
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
Y QNG +A+ +F MQ + +P+ T ++S+C+ L S G + H + + +
Sbjct: 309 YTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDID 368
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFN--EMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
T+ NA++ Y KCG+++ + +FN E+ RD SW L+SGY G E ++LF +M
Sbjct: 369 TTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRM 428
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
G++P+++T +LSACS AGL+++GR F M K +RP HY CM+D+L RAG
Sbjct: 429 QVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTK-LSVRPEMKHYACMVDMLGRAGF 487
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSI 487
L EA I K+P P W LL +CRIHGN E+G+ AA +L +L+P + YVL+S+I
Sbjct: 488 LNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNI 547
Query: 488 YASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKL 547
YA+ KW V +R+ M+ +G++K S I++ + VH F D SSPY ++Y ++E L
Sbjct: 548 YAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESL 607
Query: 548 NRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVC 607
+M GYVPD+S VLHDVE +K +LN+HSEKLA+AFG++ + G+PI+V KNLRVC
Sbjct: 608 AIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVC 667
Query: 608 SDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
SDCH A K+IS I R+I+VRD RFH F+ G CSCGD+W
Sbjct: 668 SDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 707
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/360 (31%), Positives = 177/360 (49%), Gaps = 17/360 (4%)
Query: 138 DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIH 197
+S TM+ G EAIDL+ M+ G+ ++ FT+ VL C L G+ +H
Sbjct: 96 NSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVH 155
Query: 198 AFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSE 257
++R ++FV +ALVDMY KC I A VF M ++VV WTAM+ Y Q
Sbjct: 156 GQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPL 215
Query: 258 EAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALV 317
+A+ +F MQ G D+ T SV S+ L HG +++ G I ++V N++V
Sbjct: 216 KALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIV 275
Query: 318 TFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEV 377
Y KCGN+E + +F+ M R+ +SW +++SGY + G+ + + LF +M + P+ V
Sbjct: 276 GMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPV 335
Query: 378 TLIGVLSACSRAGLVEKGR--HYFEIMVK---EYGIRPIHDHYTCMIDILSRAGRLEEAK 432
T + ++SACS G GR H F I K + +R ++D+ + G L+ A
Sbjct: 336 TALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLR------NAIMDMYMKCGDLDTAV 389
Query: 433 SFINKMPF-PPDAIGWATLLSSCRIHGNVEIGKWAAE--SLLELDPYNPASYVLLSSIYA 489
N D W L+S +HG+ GK A E S ++++ P S + A
Sbjct: 390 EMFNNCELGERDVSSWNVLISGYGVHGH---GKEALELFSRMQVEGVEPNDITFTSILSA 446
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 171/354 (48%), Gaps = 41/354 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDG-LGN-LSRITFSTMLIMSSSRRCV 58
M D V W +I+ + A+ ++ M ++G LG+ ++ I+ ++ + R
Sbjct: 193 MLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGR-- 250
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
+ +HG+ + GF V VG+ +V MYAK G + A+ FD + E+N + +N+M+
Sbjct: 251 -MAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSML--- 306
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+G QNG +A+ LF +M+ + T
Sbjct: 307 ----------------------------SGYTQNGRPTDALSLFNQMQASECDPNPVTAL 338
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT--MA 236
+++AC L + G+++H F+I + + + +A++DMY KC + A +F +
Sbjct: 339 IMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELG 398
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
++V SW ++ GYG +G +EA+++F MQ G+EP+D T S++S+C++ ++EG +
Sbjct: 399 ERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRK 458
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR--DEVSWTALV 348
+ + +V G+ G + ++ RL ++ R DEV W AL+
Sbjct: 459 CFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEV-WGALL 511
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 120/260 (46%), Gaps = 35/260 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M +G+SWN ++SG+ +G DA+ ++N M + + + +T M+ S L
Sbjct: 294 MEERNGISWNSMLSGYTQNGRPTDALSLFNQM-QASECDPNPVTALIMVSACSYLGSKHL 352
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFD--ELPEKNIVMYNTMITGL 118
GR++H ++ + + ++DMY K G + A F+ EL E+++ +N +I+G
Sbjct: 353 GRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGY 412
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
G+ +G E A++LF M++EG+ + TF
Sbjct: 413 -----------------------------GVHGHGKE--ALELFSRMQVEGVEPNDITFT 441
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
S+L+AC ++EG++ A + + + + + +VDM + + A + + + +
Sbjct: 442 SILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSR 501
Query: 239 -NVVSWTAMLVGYGQNGCSE 257
+ W A+L+ +G +E
Sbjct: 502 PSDEVWGALLLACRIHGNTE 521
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 252/642 (39%), Positives = 377/642 (58%), Gaps = 36/642 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SWN +ISG +G+ A+ V N M +G+ + IT +++L + + V
Sbjct: 182 MPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGV-KMDTITVASILPVCAQSDDVIN 240
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G IH H+LK G S VFV + L++MY+K G + DA+ FD+
Sbjct: 241 GVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQ------------------ 282
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
M+ +D +SW ++I QN A+ F+ M+L G+ D T S+
Sbjct: 283 -------------MEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSL 329
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+ L + I F+IR + D +V +G+ALV+MY K + A +VF + K+
Sbjct: 330 TSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKD 389
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQ--RNGIEPDDFTLGSVISSCANLASLEEGTQF 297
+SW ++ GY QNG + EA+ + M+ R+ I P+ T S+I + +++ +L++G +
Sbjct: 390 TISWNTLVTGYTQNGLASEAIDAYNMMEECRDTI-PNQGTWVSIIPAYSHVGALQQGMKI 448
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H + + L + V+ L+ YGKCG +ED+ LF E+ V W A+++ G+
Sbjct: 449 HAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRG 508
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
E + LF+ ML+ +K D +T + +LSACS +GLV++G+ F+IM KEYGI+P HY C
Sbjct: 509 EEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGC 568
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
M+D+L RAG LE+A + MP PDA W LLS+C+I+GN E+G A++ LLE+D N
Sbjct: 569 MVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSEN 628
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
YVLLS+IYA+ KW+ V ++R R++G+RK PG S + S+ +F + + P
Sbjct: 629 VGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKY 688
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
+IY EL+ L+ KM GYVPD S V D+E EK ++LN HSE+LAIAFG++ PP P
Sbjct: 689 TEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSP 748
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNG 639
IR+ KNLRVC DCHNATKYIS+I++REI+VRD+ RFH FK+G
Sbjct: 749 IRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDG 790
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/463 (28%), Positives = 223/463 (48%), Gaps = 49/463 (10%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL--GRQIH 65
SWN +IS + G ++A+ N + G R F T + + CV L G+++H
Sbjct: 87 SWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPIL--KACVSLVDGKKVH 144
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
+ K GF VFV + LV +Y+ R G+++
Sbjct: 145 CCVFKMGFEDDVFVAASLVHLYS-------------------------------RYGVLD 173
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
+ ++F M KD SW MI+G QNG A+ + M+ EG+ MD T S+L C
Sbjct: 174 VAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCA 233
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
+ G IH ++++ +VFV +AL++MY K ++ A+ VF M +++VSW +
Sbjct: 234 QSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNS 293
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
++ Y QN A++ F MQ GI PD T+ S+ S + L+ Q RS++
Sbjct: 294 IIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSD-----QRISRSILGF 348
Query: 306 LISF------ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+I + + NALV Y K G + +H +F+++ +D +SW LV+GY + G A+E
Sbjct: 349 VIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASE 408
Query: 360 TIDLFEKMLS-HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
ID + M P++ T + ++ A S G +++G ++K + TC+
Sbjct: 409 AIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVA-TCL 467
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
ID+ + GRLE+A S ++P ++ W +++S IHG E
Sbjct: 468 IDLYGKCGRLEDAMSLFYEIP-RDTSVPWNAIIASLGIHGRGE 509
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 199/404 (49%), Gaps = 12/404 (2%)
Query: 106 KNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAID----L 161
+NIV+ +I + G + SR F + K+ SW ++I+ ++ G EA++ L
Sbjct: 52 QNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQL 111
Query: 162 FREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK 221
F L D +TF +L AC ++L +GK++H + + +D+VFV ++LV +Y +
Sbjct: 112 FSMCGGGHLRPDFYTFPPILKAC---VSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSR 168
Query: 222 CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
+ A VF M K+V SW AM+ G+ QNG + A+ + M+ G++ D T+ S+
Sbjct: 169 YGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASI 228
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE 341
+ CA + G H L GL S + VSNAL+ Y K G ++D+ +F++M VRD
Sbjct: 229 LPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDL 288
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEI 401
VSW ++++ Y + + + F+ M G++PD +T++ + S S+ R
Sbjct: 289 VSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGF 348
Query: 402 MVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+++ + ++++ ++ G + A + +++P D I W TL++ +G
Sbjct: 349 VIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLP-RKDTISWNTLVTGYTQNGLAS 407
Query: 462 IGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
A + E P +S I A + HV L++ M+
Sbjct: 408 EAIDAYNMMEECRDTIPNQGTWVSIIPA----YSHVGALQQGMK 447
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 142/281 (50%), Gaps = 12/281 (4%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
F ++ +C + + K++HA ++ N+ + + L+++Y I + S F +
Sbjct: 25 FNALFNSC---VNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIH 81
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAV----KIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
KN+ SW +++ Y + G EA+ ++F + PD +T ++ +C SL
Sbjct: 82 KKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC---VSLV 138
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
+G + H G + V+ +LV Y + G ++ +H++F +M V+D SW A++SG+
Sbjct: 139 DGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFC 198
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
+ G A + + +M G+K D +T+ +L C+++ V G + V ++G+
Sbjct: 199 QNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGV-LIHLHVLKHGLDSDV 257
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+I++ S+ GRL++A+ ++M D + W +++++
Sbjct: 258 FVSNALINMYSKFGRLQDAQMVFDQMEV-RDLVSWNSIIAA 297
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 12/189 (6%)
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN 334
D ++ +SC N+ + + + H LV G I +S L+ Y G+I S F+
Sbjct: 22 DADFNALFNSCVNVNATK---KLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFD 78
Query: 335 EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH----GLKPDEVTLIGVLSACSRAG 390
++ ++ SW +++S Y +FGK +E ++ ++ S L+PD T +L AC
Sbjct: 79 YIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC--VS 136
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATL 450
LV+ + V + G ++ + SR G L+ A MP D W +
Sbjct: 137 LVDGKK--VHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPV-KDVGSWNAM 193
Query: 451 LSSCRIHGN 459
+S +GN
Sbjct: 194 ISGFCQNGN 202
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 246/647 (38%), Positives = 375/647 (57%), Gaps = 27/647 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M VS+N+L+ G+ G + VK++ M+ L + F+T+L + V
Sbjct: 81 MSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVS-SLYQPNEYVFTTVLSACAHSGRVFE 139
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q HG + KFG + FV S LV MY+K + D E NI
Sbjct: 140 GMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHV-DLALQVLESEHGNID----------- 187
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
D D+ + +++ L+++G EA+++ M EG+ D T+ SV
Sbjct: 188 --------------NDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSV 233
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ CG + L G Q+HA +++ +VFVGS LVDM+ KC + A VF + +NV
Sbjct: 234 MGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNV 293
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V WT+++ Y QNG EE + + M R G ++FT ++++ A +A+L G H R
Sbjct: 294 VVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHAR 353
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
G+ + + V NAL+ Y KCG I+ S+ +F +M RD ++W A++ GY++ G +
Sbjct: 354 VEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQA 413
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LF+ MLS G P+ VT +GVLSAC+ LV +G +Y ++K + + P +HYTC++
Sbjct: 414 LLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVA 473
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG LEEA++F+ D + W LL++C IH N +G AE++L++DP + +
Sbjct: 474 VLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMGT 533
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
Y LLS++YA WD V+ +R+ MRE+ V+K+PG SWI+ ++ VH+FS+D + P QI
Sbjct: 534 YTLLSNMYAKARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPECIQI 593
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y +++ L + + GYVP++ +VLHDVE +K LN+HSEKLAIA+GL+ IP PIRV
Sbjct: 594 YNKVQLLLEMIKQLGYVPNIEAVLHDVEDEQKESYLNYHSEKLAIAYGLMKIPSPAPIRV 653
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+KNLR+C DCH A K ISK+T R I+VRDA RFH F++G C+C D W
Sbjct: 654 IKNLRICEDCHTAVKLISKVTNRLIIVRDASRFHHFRDGTCTCTDHW 700
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 172/367 (46%), Gaps = 10/367 (2%)
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
E NI+ N++I ++ + +R LF M + +S+ ++ G + +G E + LF+
Sbjct: 52 EFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKN 111
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M +++ F +VL+AC + EG Q H F+ + + FV S+LV MY KC
Sbjct: 112 MVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFH 171
Query: 225 IKYAESVFRTMAW-----KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLG 279
+ A V + + + ++L ++G EAV++ M G+ D T
Sbjct: 172 VDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYV 231
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
SV+ C + L G Q H + L GL + V + LV +GKCG++ + ++F+ + R
Sbjct: 232 SVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNR 291
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
+ V WT+L++ Y + G+ ET++L M G +E T +L+A + + G
Sbjct: 292 NVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGD-LL 350
Query: 400 EIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
V++ GI+ +I++ S+ G ++ + M D I W ++ HG
Sbjct: 351 HARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMR-NRDIITWNAMICGYSQHG- 408
Query: 460 VEIGKWA 466
+GK A
Sbjct: 409 --LGKQA 413
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 143/295 (48%), Gaps = 35/295 (11%)
Query: 190 LEEGKQIHA-FIIRNDHKD-------NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
L GK IH +IRN N+ ++L+++Y KC ++ A +F M+ ++VV
Sbjct: 28 LNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVV 87
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
S+ ++ GY +G E VK+F NM + +P+++ +V+S+CA+ + EG Q HG
Sbjct: 88 SYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFL 147
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLF-----NEMNVRDEVSWTALVSGYAKFGK 356
GL+ V ++LV Y KC +++ + ++ N N D + ++++ + G+
Sbjct: 148 FKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGR 207
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA---GL-------VEKGRHYFEIMVKEY 406
E +++ +M+ G+ D VT + V+ C + GL + KG F++ V
Sbjct: 208 LGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVG-- 265
Query: 407 GIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+ ++D+ + G + A+ + + + + W +L+++ +G E
Sbjct: 266 ---------SMLVDMFGKCGDVLSARKVFDGLQ-NRNVVVWTSLMTAYLQNGEFE 310
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 286 ANLASLEEGTQFHGRSLVTGLISF--------ITVSNALVTFYGKCGNIEDSHRLFNEMN 337
AN +L G H + L+ S I N+L+ Y KC + + LF+EM+
Sbjct: 23 ANTKNLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMS 82
Query: 338 VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG 395
+R VS+ L+ GY G+ E + LF+ M+S +P+E VLSAC+ +G V +G
Sbjct: 83 LRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEG 140
>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
Length = 713
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 256/656 (39%), Positives = 376/656 (57%), Gaps = 44/656 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+ H+ SWN+L++ +A +G A +++ M G+ + +T ST L+ ++ R + L
Sbjct: 93 ITLHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGV-RPNAVTLSTALLACTAARNLAL 151
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR+++ I V S L+ MY + I +A+R FD PE
Sbjct: 152 GRKLNELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPE--------------- 196
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
KD + WT MI+ N A++L R M LEG+ + T+ S+
Sbjct: 197 ----------------KDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSL 240
Query: 181 LTACGGLLALEEGKQIH--AFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
L AC + L G H A I D V G+ LV++Y KC + A V M +
Sbjct: 241 LDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGT-LVNLYGKCGRVDDARRVLDAMPVR 299
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
VSWTAM+ Y QNG + EA+ +F M G EP D TL SV+ SCA L +L G + H
Sbjct: 300 TSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIH 359
Query: 299 GRSLVTGLISF---ITVSNALVTFYGKCGNIEDSHRLFN--EMNVRDEVSWTALVSGYAK 353
R + SF + + NA++T YGKCGN+E + +F + R V+WTA++ YA+
Sbjct: 360 AR--IRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQ 417
Query: 354 FGKANETIDLFEKML-SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
G E I+LF++ML G +P+ VT + VL ACS G +E+ +F M ++G+ P
Sbjct: 418 NGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSMGPDFGVPPAG 477
Query: 413 DHYTCMIDILSRAGRLEEA-KSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL 471
DHY C++D+L RAGRL EA K + F D + W LS+C+++G++E + AA+ +
Sbjct: 478 DHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVS 537
Query: 472 ELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADD 531
EL+P N A VLLS++YA+KG+ V+++R M+ GV+K G SWI+ +RVH F D
Sbjct: 538 ELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSD 597
Query: 532 WSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLF 591
S P +IY+ELE+L+R++ + GYVPD VL DV+ +K+++L +HSE+LA+A G++
Sbjct: 598 VSHPRKLEIYSELERLHREIKEAGYVPDTKMVLRDVDEEKKVQLLGYHSERLAMALGIIS 657
Query: 592 IPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
PPG +RVVKNLRVCSDCH ATK+IS+I R+I+VRD RFH FK+G CSCGD+W
Sbjct: 658 TPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGDYW 713
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 191/420 (45%), Gaps = 36/420 (8%)
Query: 56 RCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
R +D R++H I F+G+ LVD Y+K G ++ A+ F I ++N
Sbjct: 46 RGLDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGR-----ITLHNAH- 99
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
SW ++ QNG R A LF M +G+ +
Sbjct: 100 -------------------------SWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAV 134
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
T + L AC L G++++ I + + V S+L+ MY +C+ I+ AE F
Sbjct: 135 TLSTALLACTAARNLALGRKLNELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRS 194
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
K+VV WTAM+ Y N + A+++ M GI+ T S++ +CA+ L G
Sbjct: 195 PEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGV 254
Query: 296 QFHGRSLVTGL-ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
FH R+ GL S V+ LV YGKCG ++D+ R+ + M VR VSWTA+++ YA+
Sbjct: 255 AFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQN 314
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G A E I+LF+ M G +P ++TLI V+ +C+ G + G+ +
Sbjct: 315 GNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLML 374
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPF-PPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL 473
+I + + G LE A+ +P + W ++ R + +G+ A E E+
Sbjct: 375 LNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMI---RAYAQNGVGEEAIELFQEM 431
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 151/316 (47%), Gaps = 15/316 (4%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
+ S+L C GL +E +++HA I N F+G+ LVD Y K S+ A+ F +
Sbjct: 38 YASLLWQCRGL---DEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRIT 94
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
N SW ++ Y QNG A +F M G+ P+ TL + + +C +L G +
Sbjct: 95 LHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRK 154
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
+ L V ++L+T YG+C IE++ R F+ +D V WTA++S YA +
Sbjct: 155 LNELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWR 214
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
+ ++L +M G+K T + +L AC+ + G + + R
Sbjct: 215 TSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAG 274
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL-----L 471
++++ + GR+++A+ ++ MP ++ W ++++ +GN AAE++ +
Sbjct: 275 TLVNLYGKCGRVDDARRVLDAMPVRT-SVSWTAMIAAYAQNGN------AAEAINLFQCM 327
Query: 472 ELDPYNPASYVLLSSI 487
+L+ P+ L+S +
Sbjct: 328 DLEGAEPSDITLISVV 343
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 224/503 (44%), Positives = 327/503 (65%)
Query: 145 MITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRND 204
M+ G + ++A++LF + G DQ T + ACG L+ L++GKQIHA I+
Sbjct: 1 MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60
Query: 205 HKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFC 264
++ V S ++DMY KC + A VF ++ + V+WT+M+ G NG ++A++I+
Sbjct: 61 FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 120
Query: 265 NMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCG 324
M+++ + PD++T ++I + + + +LE+G Q H + +S V +LV Y KCG
Sbjct: 121 RMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCG 180
Query: 325 NIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
NIED++RLF +MNVR+ W A++ G A+ G A E ++LF+ M SHG++PD V+ IG+LS
Sbjct: 181 NIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILS 240
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDA 444
ACS AGL + Y M +YGI P +HY+C++D L RAG ++EA I MPF A
Sbjct: 241 ACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASA 300
Query: 445 IGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTM 504
LL +CRI G+VE GK A L L+P++ A+YVLLS+IYA+ +WD V+ R+ M
Sbjct: 301 SINRALLGACRIQGDVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMM 360
Query: 505 REKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVL 564
+ K V+KDPG SWI K+ +H+F DD S P +D IY ++E++ + + ++GYVPD VL
Sbjct: 361 KRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVL 420
Query: 565 HDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQRE 624
DVE EK + L +HSEKLAIA+GL+ P IRV+KNLRVC DCHNA KYISK+ +RE
Sbjct: 421 LDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFERE 480
Query: 625 ILVRDAVRFHLFKNGECSCGDFW 647
I++RDA RFH F++G CSCGD+W
Sbjct: 481 IVLRDANRFHHFRDGVCSCGDYW 503
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 172/320 (53%), Gaps = 33/320 (10%)
Query: 25 AVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLV 84
A+++++L+ K G + +IT +T +D G+QIH H +K GF S + V S ++
Sbjct: 14 ALELFSLIHKSGEKS-DQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGIL 72
Query: 85 DMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTT 144
DMY K G + +A G+V F + D ++WT+
Sbjct: 73 DMYIKCGDMVNA-------------------------GIV------FNYISAPDDVAWTS 101
Query: 145 MITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRND 204
MI+G + NG E +A+ ++ MR + D++TF +++ A + ALE+G+Q+HA +I+ D
Sbjct: 102 MISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLD 161
Query: 205 HKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFC 264
+ FVG++LVDMY KC +I+ A +F+ M +N+ W AMLVG Q+G +EEAV +F
Sbjct: 162 CVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFK 221
Query: 265 NMQRNGIEPDDFTLGSVISSCANLASLEEGTQF-HGRSLVTGLISFITVSNALVTFYGKC 323
+M+ +GIEPD + ++S+C++ E ++ H G+ I + LV G+
Sbjct: 222 SMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRA 281
Query: 324 GNIEDSHRLFNEMNVRDEVS 343
G ++++ ++ M + S
Sbjct: 282 GLVQEADKVIETMPFKASAS 301
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 94/165 (56%), Gaps = 5/165 (3%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+W +ISG +G+ + A+++Y+ M + + TF+T++ SS ++ GRQ+
Sbjct: 95 DDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMP-DEYTFATLIKASSCVTALEQGRQL 153
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +++K S FVG+ LVDMYAK G I DA R F ++ +NI ++N M+ GL + G
Sbjct: 154 HANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNA 213
Query: 125 EESRRLFRGMK----DKDSISWTTMITGLMQNGLEREAIDLFREM 165
EE+ LF+ MK + D +S+ +++ GL EA + M
Sbjct: 214 EEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSM 258
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 3/124 (2%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQ-IHGH 67
WN ++ G A HG+ +AV ++ M G+ R++F +L S + +H
Sbjct: 200 WNAMLVGLAQHGNAEEAVNLFKSMKSHGI-EPDRVSFIGILSACSHAGLTSEAYEYLHSM 258
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR-RGLVEE 126
+G + S LVD + GL+ +A + + +P K N + G R +G VE
Sbjct: 259 PNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVEX 318
Query: 127 SRRL 130
+R+
Sbjct: 319 GKRV 322
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 252/644 (39%), Positives = 368/644 (57%), Gaps = 33/644 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW +I+ H A +Y M DG+ ++IT T+ + G+ +
Sbjct: 170 DVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVP-NKITLYTVFNAYGDPNYLSEGKFV 228
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
+G + S V V + V+M+ GL+ DA
Sbjct: 229 YGLVSSGVMESDVRVMNSAVNMFGNAGLLGDA---------------------------- 260
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
RRLF M D+D ++W +IT +QN EA+ LF ++ +G+ + TF +L
Sbjct: 261 ---RRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVY 317
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L +L +GK IH + + + V +AL+ +Y +C++ A +F M K+V++WT
Sbjct: 318 TSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWT 377
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
M V Y QNG +EA+++F MQ G P TL +V+ +CA+LA+L++G Q H +
Sbjct: 378 VMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIEN 437
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
+ V AL+ YGKCG + ++ +F +M RD + W +++ YA+ G +ET+ LF
Sbjct: 438 RFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLF 497
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+M G+K D V+ + VLSA S +G V G YF M++++ I P + Y C++D+L R
Sbjct: 498 NQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGR 557
Query: 425 AGRLEEAKSFINKMP-FPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
AGR++EA + K+ PD I W TLL +CR H + K AAE +LE DP + +YV+
Sbjct: 558 AGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVV 617
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LS++YA+ G WD V+++R+ MR +GV+K+PG S I+ +RVH F D S P IYAE
Sbjct: 618 LSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAE 677
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
L+ LN +M GY+PD +LHDVE K ML +HSE+LAIAFGL+ PPG P+RV+KN
Sbjct: 678 LDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLISTPPGTPLRVIKN 737
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LRVCSDCH ATKYISK+ REILVRD RFH FK+G CSC D+W
Sbjct: 738 LRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 781
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 223/455 (49%), Gaps = 36/455 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +W +I + G + A+ ++ M ++ + +++T+ +L +S + G +I
Sbjct: 69 DVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMP-TKVTYVAILNACASTESLKDGMEI 127
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG IL+ GF VFVG+ L++MY K G + RG
Sbjct: 128 HGQILQQGFEGDVFVGTALINMYNKCGSV---------------------------RGAW 160
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ +RL + +D +SWT MI +Q+ A L+R M+L+G+ ++ T +V A
Sbjct: 161 DSFKRL----EHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAY 216
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G L EGK ++ + + +V V ++ V+M+ + A +F M ++VV+W
Sbjct: 217 GDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWN 276
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++ Y QN EAV++F +Q++G++ +D T +++ +L SL +G H
Sbjct: 277 IVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEA 336
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G V+ AL++ YG+C + ++F +M +D ++WT + YA+ G E + LF
Sbjct: 337 GYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLF 396
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH-YFEIMVKEYGIRPIHDHYTCMIDILS 423
++M G +P TL+ VL C+ ++KGR + I+ + + + + T +I++
Sbjct: 397 QEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVE--TALINMYG 454
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ G++ EA S KM D + W ++L + HG
Sbjct: 455 KCGKMAEAMSVFEKMA-KRDILVWNSMLGAYAQHG 488
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 183/363 (50%), Gaps = 32/363 (8%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
F +L SS + VD GR++H H+ GF V L+ MYA+ G
Sbjct: 7 FVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGS------------ 54
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
V E++++F ++ KD +WT MI Q G A+ +F +
Sbjct: 55 -------------------VPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQ 95
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M+ E + + T+ ++L AC +L++G +IH I++ + +VFVG+AL++MY KC S
Sbjct: 96 MQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGS 155
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
++ A F+ + ++VVSWTAM+ Q+ A ++ MQ +G+ P+ TL +V ++
Sbjct: 156 VRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNA 215
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
+ L EG +G + S + V N+ V +G G + D+ RLF +M RD V+W
Sbjct: 216 YGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTW 275
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
+++ Y + E + LF ++ G+K +++T + +L+ + + KG+ E +VK
Sbjct: 276 NIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHE-LVK 334
Query: 405 EYG 407
E G
Sbjct: 335 EAG 337
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 164/353 (46%), Gaps = 27/353 (7%)
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
D F ++L C ++ G+++H + + N V L+ MY +C S+ A+ VF
Sbjct: 3 DTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVF 62
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
+ K+V +WT M+ Y Q G + A+ +F MQ + P T +++++CA+ SL+
Sbjct: 63 EILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLK 122
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
+G + HG+ L G + V AL+ Y KCG++ + F + RD VSWTA+++
Sbjct: 123 DGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACV 182
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM---VKEYGIR 409
+ + L+ +M G+ P+++TL V +A + +G+ + ++ V E +R
Sbjct: 183 QHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVR 242
Query: 410 PIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS----------SCRIHGN 459
++ +++ AG L +A+ M D + W +++ + R+ G
Sbjct: 243 VMNS----AVNMFGNAGLLGDARRLFEDM-VDRDVVTWNIVITLYVQNENFGEAVRLFGR 297
Query: 460 VEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKD 512
++ A N ++VL+ ++Y S + ++E G +D
Sbjct: 298 LQQDGVKA---------NDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRD 341
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/228 (18%), Positives = 109/228 (47%), Gaps = 4/228 (1%)
Query: 272 EPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHR 331
+PD +++ C++ +++ G + H G V L+ Y +CG++ ++ +
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 332 LFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGL 391
+F + +D +WT ++ Y + G + + +F +M + P +VT + +L+AC+
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120
Query: 392 VEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
++ G ++++ G T +I++ ++ G + A ++ D + W ++
Sbjct: 121 LKDGMEIHGQILQQ-GFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEH-RDVVSWTAMI 178
Query: 452 SSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQ 499
++C H + +W ++LD P + + L +++ + G +++S+
Sbjct: 179 AACVQHDQFALARWLYRR-MQLDGVVP-NKITLYTVFNAYGDPNYLSE 224
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 249/648 (38%), Positives = 373/648 (57%), Gaps = 43/648 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD----- 59
D VSWN +ISG +G + A++ + ML + R+ +++S C +
Sbjct: 618 DVVSWNSMISGCVMNGFSHSALEFFVQML------ILRVGVDLATLVNSVAACANVGSLS 671
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
LGR +HG +K F V + L+DMY+K G + DA + F+++ +K +V
Sbjct: 672 LGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVV---------- 721
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
SWT++I ++ GL +AI LF EM +G++ D ++ S
Sbjct: 722 ---------------------SWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTS 760
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL AC +L++G+ +H +I +N+ + V +AL+DMY KC S++ A VF + K+
Sbjct: 761 VLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKD 820
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+VSW M+ GY +N EA+K+F MQ+ PD T+ ++ +C +LA+LE G HG
Sbjct: 821 IVSWNTMIGGYSKNSLPNEALKLFAEMQKES-RPDGITMACLLPACGSLAALEIGRGIHG 879
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
L G S + V+NAL+ Y KCG++ + LF+ + +D ++WT ++SG G NE
Sbjct: 880 CILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNE 939
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
I F+KM G+KPDE+T +L ACS +GL+ +G +F M+ E + P +HY CM+
Sbjct: 940 AIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMV 999
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L+R G L +A + I MP PDA W LL CRIH +VE+ + AE + EL+P N
Sbjct: 1000 DLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNAG 1059
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
YVLL++IYA KW+ V +LR + ++G++K PGCSWI+ + + F + D + P +
Sbjct: 1060 YYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKS 1119
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
I++ L L KM EG+ P M L + EK L HSEKLA+AFG+L +P G IR
Sbjct: 1120 IFSLLNNLRIKMKNEGHSPKMRYALINAGDMEKEVALCGHSEKLAMAFGILNLPSGRTIR 1179
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V KNLRVC DCH K++SK T+REI++RD+ RFH FK+G CSC DFW
Sbjct: 1180 VAKNLRVCDDCHEMAKFMSKTTRREIILRDSNRFHHFKDGFCSCRDFW 1227
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 130/450 (28%), Positives = 229/450 (50%), Gaps = 35/450 (7%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WNL++S +A G +++ ++ M K G+ S TFS +L ++ V ++IHG +
Sbjct: 521 WNLMMSEYAKIGDYRESIYLFKKMQKLGITGNS-YTFSCILKCFATLGRVGECKRIHGCV 579
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
K GFGSY V + L+ Y K G + A + FDEL ++++V +N+MI+G +
Sbjct: 580 YKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCV--------- 630
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
NG A++ F +M + + +D T + + AC +
Sbjct: 631 ----------------------MNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVG 668
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
+L G+ +H ++ V + L+DMY KC ++ A F M K VVSWT+++
Sbjct: 669 SLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIA 728
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
Y + G ++A+++F M+ G+ PD +++ SV+ +CA SL++G H +
Sbjct: 729 AYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMAL 788
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
+ VSNAL+ Y KCG++E+++ +F+++ V+D VSW ++ GY+K NE + LF +M
Sbjct: 789 CLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQ 848
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
+PD +T+ +L AC +E GR +++ +H +ID+ + G L
Sbjct: 849 KES-RPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELH-VANALIDMYVKCGSL 906
Query: 429 EEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
A+ + +P D I W ++S C +HG
Sbjct: 907 VHARLLFDMIP-EKDLITWTVMISGCGMHG 935
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 204/434 (47%), Gaps = 39/434 (8%)
Query: 20 GSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFV 79
G + +AV++ + K L +S++L + + +C+ G+ +H I G +
Sbjct: 432 GDLRNAVELLRMSQKS---ELDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVL 488
Query: 80 GSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDS 139
G+ LV MY G + + +R FD + N V
Sbjct: 489 GAKLVFMYVSCGALREGRRIFDHILSDNKVFL---------------------------- 520
Query: 140 ISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAF 199
W M++ + G RE+I LF++M+ G+ + +TF +L L + E K+IH
Sbjct: 521 --WNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGC 578
Query: 200 IIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEA 259
+ + V ++L+ Y K + A +F + ++VVSW +M+ G NG S A
Sbjct: 579 VYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSA 638
Query: 260 VKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTF 319
++ F M + D TL + +++CAN+ SL G HG+ + + +N L+
Sbjct: 639 LEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDM 698
Query: 320 YGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTL 379
Y KCGN+ D+ + F +M + VSWT+L++ Y + G ++ I LF +M S G+ PD ++
Sbjct: 699 YSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSM 758
Query: 380 IGVLSACSRAGLVEKGRHYFEIMVKEYG--IRPIHDHYTCMIDILSRAGRLEEAKSFINK 437
VL AC+ ++KGR + K P+ + ++D+ ++ G +EEA ++
Sbjct: 759 TSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSN---ALMDMYAKCGSMEEAYLVFSQ 815
Query: 438 MPFPPDAIGWATLL 451
+P D + W T++
Sbjct: 816 IPV-KDIVSWNTMI 828
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 154/312 (49%), Gaps = 5/312 (1%)
Query: 143 TTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIR 202
T I + G R A++L R + L ++ ++ S+L C L+EGK +H+ I
Sbjct: 422 NTKICKFCEVGDLRNAVELLRMSQKSELDLNAYS--SILQLCAEHKCLQEGKMVHSVISS 479
Query: 203 NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN-VVSWTAMLVGYGQNGCSEEAVK 261
N +G+ LV MY C +++ +F + N V W M+ Y + G E++
Sbjct: 480 NGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIY 539
Query: 262 IFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYG 321
+F MQ+ GI + +T ++ A L + E + HG G S+ TV N+L+ Y
Sbjct: 540 LFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYF 599
Query: 322 KCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIG 381
K G ++ +H+LF+E+ RD VSW +++SG G ++ ++ F +ML + D TL+
Sbjct: 600 KSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVN 659
Query: 382 VLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFP 441
++AC+ G + GR VK R + + T ++D+ S+ G L +A KM
Sbjct: 660 SVAACANVGSLSLGRALHGQGVKACFSREVMFNNT-LLDMYSKCGNLNDAIQAFEKMG-Q 717
Query: 442 PDAIGWATLLSS 453
+ W +L+++
Sbjct: 718 KTVVSWTSLIAA 729
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 125/251 (49%), Gaps = 35/251 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VSWN +I G++ + N+A+K++ M K+ + IT + +L S +++
Sbjct: 816 IPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKESRPD--GITMACLLPACGSLAALEI 873
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR IHG IL+ G+ S + V + L+DMY K G + A+ FD +PEK+++ + MI+G
Sbjct: 874 GRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGC-- 931
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GM +GL EAI F++MR+ G+ D+ TF S+
Sbjct: 932 ------------GM-----------------HGLGNEAIATFQKMRIAGIKPDEITFTSI 962
Query: 181 LTACGGLLALEEG-KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK- 238
L AC L EG ++ I + + + + +VD+ + ++ A ++ TM K
Sbjct: 963 LYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKP 1022
Query: 239 NVVSWTAMLVG 249
+ W A+L G
Sbjct: 1023 DATIWGALLCG 1033
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 231/609 (37%), Positives = 380/609 (62%), Gaps = 3/609 (0%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN + GHA A+K+Y M+ GL S TF +L + + G+QIHGH+
Sbjct: 59 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNS-YTFPFLLKSCAKSKAFKEGQQIHGHV 117
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
LK G ++V + L+ MY + G + DA + FDE P +++V Y +I G RG +E ++
Sbjct: 118 LKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQ 177
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
++F + KD +SW MI+G + G +EA++LF++M + D+ T +V++AC
Sbjct: 178 KMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSG 237
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
++E G+Q+H++I + N+ + +AL+D+Y KC ++ A +F + +K+V+SW ++
Sbjct: 238 SIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIG 297
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG--RSLVTGL 306
GY +EA+ +F M R+G P+D T+ S++ +CA+L +++ G H + G+
Sbjct: 298 GYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGV 357
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ ++ +L+ Y KCG+IE +H++FN + + SW A++ G+A G+A+ + D+F +
Sbjct: 358 ANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSR 417
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M +G++PD++T +G+LSACS +G+++ GRH F M ++Y + P +HY CMID+L +G
Sbjct: 418 MRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSG 477
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+EA+ IN M PD + W +LL +C++HGNVE+G+ A++L++++P NP SYVLLS+
Sbjct: 478 LFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSN 537
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IYA+ G+W+ V+ R + +KG++K PGCS I+ S VH F D P + +IY LE+
Sbjct: 538 IYATAGRWNEVANTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEE 597
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
+ + + G+VPD S VL ++E K L HHSEKLAIAFGL+ PG + +VKNLRV
Sbjct: 598 MEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRV 657
Query: 607 CSDCHNATK 615
C +CH A K
Sbjct: 658 CRNCHEAYK 666
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 203/436 (46%), Gaps = 77/436 (17%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSS---RRC 57
+P D VSWN +ISG+A G+ +A++++ M+K + R STM+ + S+
Sbjct: 183 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNV----RPDESTMVTVVSACAQSGS 238
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
++LGRQ+H I GFGS + + + L+D+Y+K G + A F+ LP K+++ +NT+I G
Sbjct: 239 IELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGG 298
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
+T M L +EA+ LF+EM G + T
Sbjct: 299 ------------------------YTHM-------NLYKEALLLFQEMLRSGETPNDVTM 327
Query: 178 GSVLTACGGLLALEEGKQIHAFIIR--NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
S+L AC L A++ G+ IH +I + + + ++L+DMY KC I+ A VF ++
Sbjct: 328 LSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSI 387
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
K++ SW AM+ G+ +G ++ + IF M++NGIEPDD T ++S+C++ L+ G
Sbjct: 388 LHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGR 447
Query: 296 Q-FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
F + + + ++ G G +++ + N M
Sbjct: 448 HIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTME----------------- 490
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
++PD V +L AC G VE G + + ++K P
Sbjct: 491 -----------------MEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENP--GS 531
Query: 415 YTCMIDILSRAGRLEE 430
Y + +I + AGR E
Sbjct: 532 YVLLSNIYATAGRWNE 547
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 176/365 (48%), Gaps = 35/365 (9%)
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
+F +++ + + W TM G + A+ L+ M GL + +TF +L +C A
Sbjct: 47 VFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKA 106
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA---- 245
+EG+QIH +++ +++V ++L+ MY + ++ A VF ++VVS+TA
Sbjct: 107 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKG 166
Query: 246 ---------------------------MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
M+ GY + G +EA+++F +M + + PD+ T+
Sbjct: 167 YASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 226
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
+V+S+CA S+E G Q H G S + + NAL+ Y KCG +E + LF +
Sbjct: 227 VTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPY 286
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR-- 396
+D +SW L+ GY E + LF++ML G P++VT++ +L AC+ G ++ GR
Sbjct: 287 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 346
Query: 397 HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRI 456
H + I + G+ T +ID+ ++ G +E A N + W ++ +
Sbjct: 347 HVY-IDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAM 404
Query: 457 HGNVE 461
HG +
Sbjct: 405 HGRAD 409
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 145/297 (48%), Gaps = 38/297 (12%)
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYC----KCKSIKYAESVFRTMAWKNVVSWTA 245
L+ + IHA +I+ + + S L++ +C + YA SVF T+ N++ W
Sbjct: 3 LQSLRMIHAQMIKTGLHNTNYALSKLIE-FCILSPHFDGLPYAISVFETIQEPNLLIWNT 61
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
M G+ + A+K++ M G+ P+ +T ++ SCA + +EG Q HG L G
Sbjct: 62 MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLG 121
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL------------------ 347
+ V +L++ Y + G +ED+H++F+E RD VS+TAL
Sbjct: 122 CDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFD 181
Query: 348 -------------VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEK 394
+SGYA+ G E ++LF+ M+ ++PDE T++ V+SAC+++G +E
Sbjct: 182 EIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIEL 241
Query: 395 GRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
GR + ++G +ID+ S+ G LE A +P+ D I W TL+
Sbjct: 242 GRQVHS-WIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPY-KDVISWNTLI 296
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 250/676 (36%), Positives = 385/676 (56%), Gaps = 68/676 (10%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN +I G++ + +A+ +Y M+ G+ + TF +L + ++ G ++H HI
Sbjct: 78 WNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHI 137
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+K GF S +FV + L+ +Y+ G + A+ FDE +++V YNTMI G E
Sbjct: 138 IKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPE--- 194
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
A+ LF EM+ G+ D+FTF ++ + C L
Sbjct: 195 ----------------------------SALCLFGEMQNSGILPDEFTFVALFSVCSVLN 226
Query: 189 ALEEGKQIHAFIIRNDHK--DNVFVGSALVDMYCKCKSIKYAESVFRTM-------AW-- 237
GKQIHA + +N N+ + SA+VDMY KC I AE VF TM AW
Sbjct: 227 EPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSS 286
Query: 238 -----------------------KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD 274
++V+SWTAM+ GY Q G EA+++F M+ GI+PD
Sbjct: 287 MVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPD 346
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITV-SNALVTFYGKCGNIEDSHRLF 333
+ TL +V+S+CA L + + G + + + + G+ + T+ + A++ Y KCG+I+ + +F
Sbjct: 347 EVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIF 406
Query: 334 NEM--NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGL 391
+ N++ + ++++G A+ G I +F +++S GLKPDEVT +GVL AC +GL
Sbjct: 407 RRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGL 466
Query: 392 VEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
+E+G+ FE M YGI+P +HY CM+D+L R G LEEA + KMPF +++ W LL
Sbjct: 467 IEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALL 526
Query: 452 SSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRK 511
S+CR HGNV+IG+ A + LLE++ + A YVLLS+I A +W+ Q+R+ M + G+RK
Sbjct: 527 SACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRK 586
Query: 512 DPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSE 571
PG S+I+ +H F A D S P +I L+ + ++ GYVP+ + V+ D++ E
Sbjct: 587 PPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNTAQVMFDIDEEE 646
Query: 572 KIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAV 631
K ++++HSEKLA+AFGL++ P IR+VKNLR+C+DCH A K +S+I REI VRD +
Sbjct: 647 KESVVSYHSEKLALAFGLMYCSPTDTIRIVKNLRICADCHKAFKLVSEIYGREITVRDTM 706
Query: 632 RFHLFKNGECSCGDFW 647
RFH F+NG CSC DFW
Sbjct: 707 RFHHFRNGSCSCMDFW 722
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/419 (29%), Positives = 210/419 (50%), Gaps = 65/419 (15%)
Query: 49 LIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNI 108
L + S + G QIH + G +F S L+ ++ LG +K G D
Sbjct: 13 LCLLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLG----SKDGLDH------ 62
Query: 109 VMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE 168
SR LF + + W TMI G ++ REAI L+ M +
Sbjct: 63 ------------------SRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAK 104
Query: 169 GLAM-DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY 227
G+A + FTF +L +C L +LE G ++H+ II++ + ++FV +AL+ +Y ++
Sbjct: 105 GIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNL 164
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN 287
A ++F +++VS+ M+ GY + E A+ +F MQ +GI PD+FT ++ S C+
Sbjct: 165 ARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSV 224
Query: 288 LASLEEGTQFHG------RSLVT---------------GLIS-----FITVS-------- 313
L G Q H RS+ + GLI+ F T+
Sbjct: 225 LNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAW 284
Query: 314 NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLK 373
+++V Y +CG I + +LFN M+ RD +SWTA++SGY++ G+ +E ++LF++M + G+K
Sbjct: 285 SSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIK 344
Query: 374 PDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI-DILSRAGRLEEA 431
PDEVTL+ VLSAC+R G + G+ + + E G+ + T + D+ ++ G ++ A
Sbjct: 345 PDEVTLVAVLSACARLGAFDLGKRLYHQYI-ENGVFNQNTILTAAVMDMYAKCGSIDSA 402
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 129/418 (30%), Positives = 211/418 (50%), Gaps = 21/418 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VS+N +I G+A A+ ++ M G+ TF + + S ++G+QI
Sbjct: 176 DLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILP-DEFTFVALFSVCSVLNEPNVGKQI 234
Query: 65 HGHILK--FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL-PEKNIVMYNTMITGLLRR 121
H + K S + + S +VDMYAK GLI A+R F + K+ +++M+ G R
Sbjct: 235 HAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARC 294
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G + +R+LF M ++D ISWT MI+G Q G EA++LF+EM G+ D+ T +VL
Sbjct: 295 GEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVL 354
Query: 182 TACGGLLALEEGKQI-HAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA--WK 238
+AC L A + GK++ H +I N + +A++DMY KC SI A +FR + K
Sbjct: 355 SACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMK 414
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-F 297
+ +M+ G Q+G E A+ +F + G++PD+ T V+ +C + +EEG + F
Sbjct: 415 TGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLF 474
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVS-----GY 351
G+ + +V G+ G +E+++ L +M + V W AL+S G
Sbjct: 475 ESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGN 534
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
K G+ L E HG + V L +L + A E+ R ++M +++GIR
Sbjct: 535 VKIGEIAGQ-KLLEMEAQHGAR--YVLLSNIL---ADANQWEEARQVRKVM-EDHGIR 585
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 158/331 (47%), Gaps = 12/331 (3%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS---IKYAESVFRTMAWKNVVSWTA 245
+ ++G QIHA I N +F S L+ + S + ++ +F + N+ W
Sbjct: 21 SFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNT 80
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEP-DDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
M+ GY ++ EA+ ++ +M GI P ++FT +++SCA L+SLE G + H +
Sbjct: 81 MIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKH 140
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G S + V NAL+ Y GN+ + LF+E VRD VS+ ++ GYA+ + + LF
Sbjct: 141 GFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLF 200
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY---TCMIDI 421
+M + G+ PDE T + + S CS G+ + K +R I + + ++D+
Sbjct: 201 GEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYK--NLRSIDSNILLKSAIVDM 258
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
++ G + A+ + M A W++++ G + + + + E D S+
Sbjct: 259 YAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVI---SW 315
Query: 482 VLLSSIYASKGKWDHVSQLRRTMREKGVRKD 512
+ S Y+ G+ +L + M G++ D
Sbjct: 316 TAMISGYSQAGQCSEALELFKEMEALGIKPD 346
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 247/649 (38%), Positives = 370/649 (57%), Gaps = 34/649 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVK-VYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
MP D V+WN +++G+A +G + A++ V + ++G +T ++L + R +
Sbjct: 77 MPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALH 136
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
R++H L+ G V V + ++D Y K G
Sbjct: 137 ACREVHAFALRAGLDELVNVSTAVLDAYCKCGA--------------------------- 169
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
VE +R +F M ++S+SW MI G NG EA+ LF M EG+ + + +
Sbjct: 170 ----VEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLA 225
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
L ACG L L+E +++H ++R NV V +AL+ Y KCK A VF + K
Sbjct: 226 ALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKK 285
Query: 240 V-VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+SW AM++G+ QN C E+A ++F MQ + PD FTL SVI + A+++ + H
Sbjct: 286 TRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIH 345
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G S+ L + V AL+ Y KCG + + RLF+ R ++W A++ GY G
Sbjct: 346 GYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQ 405
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
++LFE+M G P+E T + VL+ACS AGLV++G+ YF M K+YG+ P +HY M
Sbjct: 406 AAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTM 465
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
+D+L RAG+L+EA SFI MP P + +L +C++H NVE+ + +A+ + EL P
Sbjct: 466 VDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEESAQIIFELGPEEG 525
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
+VLL++IYA+ W V+++R M +KG++K PG S I+ K+ VH F + + ++
Sbjct: 526 VYHVLLANIYANASMWKDVARVRTAMEKKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAK 585
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
IYA L KL ++ GYVPD S+ HDVE K ++LN HSEKLAIA+GL+ PG I
Sbjct: 586 DIYARLAKLIEEIKDMGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTI 644
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
++ KNLRVC+DCHNATK IS +T REI++RD RFH FK+G+CSCGD+W
Sbjct: 645 QIKKNLRVCNDCHNATKLISLLTGREIIMRDIQRFHHFKDGKCSCGDYW 693
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/435 (28%), Positives = 206/435 (47%), Gaps = 43/435 (9%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
TF+ +L + ++R + GR +H + G S + L +MY K DA+R FD +
Sbjct: 18 TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
P ++ V +N ++ G R GL + M+ ++ G ER
Sbjct: 78 PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEE--------------GGERP------ 117
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
D T SVL AC AL +++HAF +R + V V +A++D YCKC
Sbjct: 118 ---------DSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCG 168
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
+++ A +VF M +N VSW AM+ GY NG + EA+ +F M + G++ D ++ + +
Sbjct: 169 AVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQ 228
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM-NVRDEV 342
+C L L+E + H + GL S ++V+NAL+T Y KC + + ++FNE+ N + +
Sbjct: 229 ACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRI 288
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
SW A++ G+ + + LF +M ++PD TL+ V+ A + + R
Sbjct: 289 SWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQAR-----W 343
Query: 403 VKEYGIRPIHDH----YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ Y IR D T +ID+ S+ GR+ A+ + I W ++ HG
Sbjct: 344 IHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDS-ARDRHVITWNAMIHGYGSHG 402
Query: 459 NVEIGKWAAESLLEL 473
G+ A E E+
Sbjct: 403 ---FGQAAVELFEEM 414
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 162/343 (47%), Gaps = 17/343 (4%)
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
TF ++L C L G+ +HA + +AL +MY KC+ A VF M
Sbjct: 18 TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQ--RNGIEPDDFTLGSVISSCANLASLEE 293
++ V+W A++ GY +NG A++ MQ G PD TL SV+ +CA+ +L
Sbjct: 78 PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHA 137
Query: 294 GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK 353
+ H +L GL + VS A++ Y KCG +E + +F+ M VR+ VSW A++ GYA
Sbjct: 138 CREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYAD 197
Query: 354 FGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
G A E + LF +M+ G+ + +++ L AC G +++ R E++V+ G+
Sbjct: 198 NGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVR-VGLSSNVS 256
Query: 414 HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL--- 470
+I ++ R + A N++ I W ++ + E AE L
Sbjct: 257 VTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPE----DAERLFAR 312
Query: 471 LELDPYNPASYVLLSSIYAS-------KGKWDHVSQLRRTMRE 506
++L+ P S+ L+S I A + +W H +R + +
Sbjct: 313 MQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQ 355
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 249/644 (38%), Positives = 373/644 (57%), Gaps = 54/644 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +SWN +ISG+ S+G + +Y M+ G+ ++ T ++L+ + + LG+ +
Sbjct: 77 DVISWNSMISGYVSNGLTERGLGIYKQMMYLGI-DVDLATIISVLVGCAKSGTLSLGKAV 135
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +K F + + L+DMY+K G + A R F+++ E+N+V + +MI G R G
Sbjct: 136 HSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDG-- 193
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
W+ AI L ++M EG+ +D S+L AC
Sbjct: 194 -----------------WSD------------GAIILLQQMEKEGVKLDVVAITSILHAC 224
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+L+ GK +H +I N+ N+FV +AL+DMY KC S++ A SVF TM K+++SW
Sbjct: 225 ARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWN 284
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
M+ ++PD T+ ++ +CA+L++LE G + HG L
Sbjct: 285 TMV---------------------GELKPDSRTMACILPACASLSALERGKEIHGYILRN 323
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G S V+NALV Y KCG + + LF+ + +D VSWT +++GY G NE I F
Sbjct: 324 GYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATF 383
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+M G++PDEV+ I +L ACS +GL+E+G +F IM ++ I P +HY CM+D+LSR
Sbjct: 384 NEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSR 443
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
G L +A FI +P PDA W LL CRI+ ++E+ + AE + EL+P N YVLL
Sbjct: 444 TGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLL 503
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF-SADDWSSPYSDQIYAE 543
++IYA KW+ V ++R + +KG+RK+PGCSWI+ K RV++F S ++ S P+S +I +
Sbjct: 504 ANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESL 563
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
L+K+ RKM +EGY P L + + +K L HSEKLA+AFGLL +PP IRV KN
Sbjct: 564 LKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKN 623
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LRVC DCH K++SK T+REI++RD+ RFH FK+G CSC FW
Sbjct: 624 LRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 667
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 194/396 (48%), Gaps = 43/396 (10%)
Query: 83 LVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMK------- 135
LV YA G + + +R FD + +KN+ ++N M++ + G +ES LF+ M
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61
Query: 136 -------------DKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
D+D ISW +MI+G + NGL + ++++M G+ +D T SVL
Sbjct: 62 RSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 121
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
C L GK +H+ I++ + + + L+DMY KC + A VF M +NVVS
Sbjct: 122 GCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 181
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL 302
WT+M+ GY ++G S+ A+ + M++ G++ D + S++ +CA SL+ G H
Sbjct: 182 WTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIK 241
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
+ S + V NAL+ Y KCG++E ++ +F+ M V+D +SW +V
Sbjct: 242 ANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG------------- 288
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL 422
LKPD T+ +L AC+ +E+G+ +++ G ++D+
Sbjct: 289 --------ELKPDSRTMACILPACASLSALERGKEIHGYILRN-GYSSDRHVANALVDLY 339
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ G L A+ + +P D + W +++ +HG
Sbjct: 340 VKCGVLGLARLLFDMIP-SKDLVSWTVMIAGYGMHG 374
>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 721
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 252/656 (38%), Positives = 380/656 (57%), Gaps = 43/656 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VS+N LISG+A A+ ++ M K G + T S ++ R VDL
Sbjct: 100 IPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGF-EVDGFTLSGLIAACCDR--VDL 156
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+Q+H + GF SY V + V Y+K
Sbjct: 157 IKQLHCFSVSGGFDSYSSVNNAFVTYYSK------------------------------- 185
Query: 121 RGLVEESRRLFRGMKD-KDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
GL+ E+ +F GM + +D +SW +MI Q+ +A+ L++EM +G +D FT S
Sbjct: 186 GGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLAS 245
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC---KSIKYAESVFRTMA 236
VL A L L G+Q H +I+ N VGS L+D Y KC + +E VF+ +
Sbjct: 246 VLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEIL 305
Query: 237 WKNVVSWTAMLVGYGQNG-CSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
++V W M+ GY N SEEAVK F MQR G PDD + V S+C+NL+S +
Sbjct: 306 SPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCK 365
Query: 296 QFHGRSLVTGLIS-FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
Q HG ++ + + S I+V+NAL++ Y K GN++D+ +F+ M + VS+ ++ GYA+
Sbjct: 366 QIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQH 425
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G E + L+++ML G+ P+++T + VLSAC+ G V++G+ YF M + + I P +H
Sbjct: 426 GHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEH 485
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
Y+CMID+L RAG+LEEA+ FI+ MP+ P ++ WA LL +CR H N+ + + AA L+ +
Sbjct: 486 YSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQ 545
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS 534
P YV+L+++YA KW+ ++ +R++MR K +RK PGCSWI+ K + H+F A+DWS
Sbjct: 546 PLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSH 605
Query: 535 PYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKM---LNHHSEKLAIAFGLLF 591
P ++ LE++ +KM K GYV D + + + + L HHSEKLA+AFGL+
Sbjct: 606 PMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMS 665
Query: 592 IPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G + VVKNLR+C DCHNA K++S + REI+VRD +RFH FK+G+CSCGD+W
Sbjct: 666 TRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 229/470 (48%), Gaps = 11/470 (2%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
TF +L+ S + R + G+ +H +K S ++ + V++Y+K G + A+ F
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
E N+ YN ++ + + +R+LF + D++S+ T+I+G A+ LF+
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
MR G +D FT ++ AC + L KQ+H F + V +A V Y K
Sbjct: 130 RMRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGG 187
Query: 224 SIKYAESVFRTM-AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
++ A SVF M ++ VSW +M+V YGQ+ +A+ ++ M G + D FTL SV+
Sbjct: 188 LLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIE---DSHRLFNEMNVR 339
++ +L L G QFHG+ + G V + L+ FY KCG + DS ++F E+
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSP 307
Query: 340 DEVSWTALVSGYAKFGK-ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
D V W ++SGY+ + + E + F +M G +PD+ + + V SACS + +
Sbjct: 308 DLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQI 367
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ +K + +I + ++G L++A+ ++MP +A+ + ++ HG
Sbjct: 368 HGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP-ELNAVSFNCMIKGYAQHG 426
Query: 459 NVEIGKWAAESLLE--LDPYNPASYVLLSSIYASKGKWDHVSQLRRTMRE 506
+ + +L+ + P N ++V + S A GK D + TM+E
Sbjct: 427 HGTEALLLYQRMLDSGIAP-NKITFVAVLSACAHCGKVDEGQEYFNTMKE 475
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 237/570 (41%), Positives = 353/570 (61%), Gaps = 36/570 (6%)
Query: 78 FVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDK 137
F+ + L++MY K GL++DA+ FD++P++N+V
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPDRNVV---------------------------- 32
Query: 138 DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIH 197
SWTTMI+ L +A++ M EG+ + FT+ SVL AC GL L +Q+H
Sbjct: 33 ---SWTTMISAYSAAKLNDKALEFLVLMLREGVRPNMFTYSSVLRACDGLFNL---RQLH 86
Query: 198 AFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSE 257
II+ +VFV SAL+D+Y + ++ A VF M ++V W++++ G+ QN +
Sbjct: 87 CCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGD 146
Query: 258 EAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALV 317
EA+++F M+R G TL SV+ +C LA LE G Q H L + ++NAL+
Sbjct: 147 EALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLKYD--QDLILNNALL 204
Query: 318 TFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEV 377
Y KCG++ED++ +F M +D +SW+ +++G A+ G + E + LFE M G+KP+ V
Sbjct: 205 DMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYV 264
Query: 378 TLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINK 437
T++GVL ACS AGLVE+G +YF M + +GI P +HY CMID+L RAGRL EA IN+
Sbjct: 265 TIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINE 324
Query: 438 MPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHV 497
M PDA+ W LL++CR+H NV++ AA+ +L LDP + +YVLLS+IYA+ +W+ V
Sbjct: 325 MECEPDAVTWRALLNACRVHRNVDVAIHAAKQILRLDPQDAGTYVLLSNIYANTQRWNDV 384
Query: 498 SQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYV 557
+++RRTM +G++K+PGCSWI+ ++H F D S P +I +L +L K++ GYV
Sbjct: 385 AEVRRTMTNRGIKKEPGCSWIEVSKQIHAFILGDRSHPQIREINIQLNQLIYKLMGVGYV 444
Query: 558 PDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYI 617
PD + VL D+E + L +HSEKLAI FGL+ +P G IR+ KNLR+C DCH TK +
Sbjct: 445 PDTNFVLQDLEGEQMQDSLRYHSEKLAIVFGLMSLPRGQTIRIRKNLRICGDCHLFTKLL 504
Query: 618 SKITQREILVRDAVRFHLFKNGECSCGDFW 647
+K+ QR I++RD VR+H F++G CSCGDFW
Sbjct: 505 AKMEQRIIVIRDPVRYHHFQDGLCSCGDFW 534
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 114/354 (32%), Positives = 190/354 (53%), Gaps = 43/354 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW +IS +++ + A++ LML++G+ + T+S++L R C L
Sbjct: 26 MPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGV-RPNMFTYSSVL-----RACDGL 79
Query: 61 G--RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
RQ+H I+K G S VFV S L+D+Y++ G + +A R FDE+ ++V+++++I G
Sbjct: 80 FNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGF 139
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+ +E+ RLF+ MK G Q T
Sbjct: 140 AQNSDGDEALRLFKRMKRA-------------------------------GFLAQQTTLT 168
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
SVL AC GL LE G+Q+H +++ D ++ + +AL+DMYCKC S++ A +VF M K
Sbjct: 169 SVLRACTGLALLELGRQVHVHVLKYDQ--DLILNNALLDMYCKCGSLEDANAVFVRMVEK 226
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT-QF 297
+V+SW+ M+ G QNG S+EA+K+F +M+ GI+P+ T+ V+ +C++ +EEG F
Sbjct: 227 DVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYF 286
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
H + G+ ++ G+ G + ++ L NEM D V+W AL++
Sbjct: 287 HSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNA 340
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/600 (40%), Positives = 352/600 (58%), Gaps = 34/600 (5%)
Query: 50 IMSSSRRC--VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKN 107
I+ + C V LGR +HG +K + L+DMYAK G++ A FD + +
Sbjct: 4 ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRT 63
Query: 108 IVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL 167
+V +WT++I + GL EAI LF EM
Sbjct: 64 VV-------------------------------TWTSLIAAYAREGLSDEAIRLFHEMDR 92
Query: 168 EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY 227
EG++ D FT +VL AC +LE GK +H +I ND + N+FV +AL+DMY KC S++
Sbjct: 93 EGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMED 152
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN 287
A SVF M K+++SW M+ GY +N EA+ +F +M ++PD TL ++ +CA+
Sbjct: 153 ANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLE-MKPDGTTLACILPACAS 211
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
LASL+ G + HG L G S V+NALV Y KCG + LF+ + +D ++WT +
Sbjct: 212 LASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVM 271
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYG 407
++GY G N I F +M G++PDEV+ I +L ACS +GL+++G +F +M E
Sbjct: 272 IAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECN 331
Query: 408 IRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAA 467
++P +HY C++D+L+R+G+L A FI MP PDA W LLS CRIH +V++ + A
Sbjct: 332 VKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVA 391
Query: 468 ESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF 527
E + EL+P N YVLL++ YA KW+ V +LR+ + +G++K+PGCSWI+ KS+VHIF
Sbjct: 392 EHVFELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIF 451
Query: 528 SADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAF 587
A + S P + +I L++L KM +EGY P L + + +K L HSEKLA+AF
Sbjct: 452 LAGNSSHPQAKKIEVLLKRLRSKMKEEGYFPKTRYALINADSLQKETALCGHSEKLAMAF 511
Query: 588 GLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G+L +PP IRV KNLRVC DCH K+ISK REI++RD+ RFH FK+G C C FW
Sbjct: 512 GILNLPPARTIRVSKNLRVCGDCHEMAKFISKTLGREIVLRDSNRFHHFKDGVCCCRGFW 571
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 180/366 (49%), Gaps = 39/366 (10%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V+W LI+ +A G ++A+++++ M ++G+ T +T+L + ++ G+ +H
Sbjct: 65 VTWTSLIAAYAREGLSDEAIRLFHEMDREGVSP-DIFTITTVLHACACNGSLENGKDVHN 123
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+I + S +FV + L+DMYAK G + E+
Sbjct: 124 YIRENDMQSNIFVCNALMDMYAKCGSM-------------------------------ED 152
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+ +F M KD ISW TMI G +N L EA+ LF +M LE + D T +L AC
Sbjct: 153 ANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLE-MKPDGTTLACILPACAS 211
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L +L+ GK++H I+RN + V +ALVDMY KC A +F + K++++WT M
Sbjct: 212 LASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVM 271
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG-RSLVTG 305
+ GYG +G A+ F M++ GIEPD+ + S++ +C++ L+EG +F
Sbjct: 272 IAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECN 331
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKANETIDLF 364
+ + +V + G + +++ M + D W AL+SG + + + L
Sbjct: 332 VKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGC----RIHHDVKLA 387
Query: 365 EKMLSH 370
EK+ H
Sbjct: 388 EKVAEH 393
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 96/174 (55%), Gaps = 6/174 (3%)
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
S++ +CAN + G HG + + T N L+ Y KCG ++ + +F+ M+VR
Sbjct: 3 SILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVR 62
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
V+WT+L++ YA+ G ++E I LF +M G+ PD T+ VL AC+ G +E G+
Sbjct: 63 TVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVH 122
Query: 400 EIMVKEYGIRPIHDHYTC--MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
++E ++ + + C ++D+ ++ G +E+A S +MP D I W T++
Sbjct: 123 N-YIRENDMQS--NIFVCNALMDMYAKCGSMEDANSVFLEMPV-KDIISWNTMI 172
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 117/257 (45%), Gaps = 47/257 (18%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLML----KDGLGNLSRITFSTMLIMSSSRR 56
MP D +SWN +I G++ + N+A+ ++ M+ DG T + +L +S
Sbjct: 160 MPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLEMKPDG------TTLACILPACASLA 213
Query: 57 CVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMIT 116
+D G+++HGHIL+ GF S V + LVDMY K G+ A+ FD +P K+++
Sbjct: 214 SLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLI------- 266
Query: 117 GLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
+WT MI G +G AI F EMR G+ D+ +
Sbjct: 267 ------------------------TWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVS 302
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDH---KDNVFVGSALVDMYCKCKSIKYAESVFR 233
F S+L AC L+EG + F + D K + + +VD+ + + A +
Sbjct: 303 FISILYACSHSGLLDEGWRF--FNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIK 360
Query: 234 TMAWK-NVVSWTAMLVG 249
+M + + W A+L G
Sbjct: 361 SMPIEPDATIWGALLSG 377
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/604 (37%), Positives = 357/604 (59%), Gaps = 32/604 (5%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
+ + + + +D R+IHGH+ F F+ + L+ +Y K G
Sbjct: 53 VYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGS----------- 101
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
V E+ ++F M+ KD +SWT++I G QN + EAI L
Sbjct: 102 --------------------VVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLP 141
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
M + FTF S+L A G G QIHA ++ D ++V+VGSAL+DMY +C
Sbjct: 142 GMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCG 201
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
+ A +VF + KN VSW A++ G+ + G E A+ +F MQRNG E FT S+ S
Sbjct: 202 KMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFS 261
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
A + +LE+G H + + V N ++ Y K G++ D+ ++F + +D V+
Sbjct: 262 GLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVT 321
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
W ++++ +A++G E + FE+M G+ +++T + +L+ACS GLV++G+HYF+ M+
Sbjct: 322 WNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFD-MI 380
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
KEY + P +HY ++D+L RAG L A FI KMP P A W LL++CR+H N ++G
Sbjct: 381 KEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVG 440
Query: 464 KWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSR 523
++AA+ + +LDP + VLL +IYAS G WD +++R+ M+ GV+K+P CSW++ +
Sbjct: 441 QFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIGNS 500
Query: 524 VHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKL 583
VH+F A+D + P +++IY ++++ K+ KEGYVPDM VL V+ E+ L +HSEK+
Sbjct: 501 VHMFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKI 560
Query: 584 AIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSC 643
A+AF L+ +P G IR++KN+R+C DCH+A KYISK+ +REI+VRD RFH F NG CSC
Sbjct: 561 ALAFALIQMPAGATIRIMKNIRICGDCHSAFKYISKVFEREIVVRDTNRFHHFSNGSCSC 620
Query: 644 GDFW 647
GD+W
Sbjct: 621 GDYW 624
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 152/293 (51%), Gaps = 32/293 (10%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW LI+G+A + +A+ + MLK G + TF+++L + + +G QI
Sbjct: 116 DMVSWTSLIAGYAQNDMPAEAIGLLPGMLK-GRFKPNGFTFASLLKAAGAYADSGIGGQI 174
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +K + V+VGS L+DMYA+ G + A FD+L KN V +N +I+G R+G
Sbjct: 175 HALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDG 234
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
E T LM +F EM+ G FT+ S+ +
Sbjct: 235 E---------------------TALM----------VFAEMQRNGFEATHFTYSSIFSGL 263
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G+ ALE+GK +HA ++++ K FVG+ ++DMY K S+ A VF + K++V+W
Sbjct: 264 AGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWN 323
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
+ML + Q G +EAV F M+++GI + T ++++C++ ++EG +
Sbjct: 324 SMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHY 376
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 156/304 (51%), Gaps = 5/304 (1%)
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
LA + + +TAC L++ ++IH + + + + F+ ++L+ +YCKC S+ A
Sbjct: 47 LAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAH 106
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
VF M K++VSWT+++ GY QN EA+ + M + +P+ FT S++ + A
Sbjct: 107 KVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYA 166
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
G Q H ++ + V +AL+ Y +CG ++ + +F++++ ++ VSW AL+S
Sbjct: 167 DSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALIS 226
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
G+A+ G + +F +M +G + T + S + G +E+G+ MVK
Sbjct: 227 GFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKL 286
Query: 410 PIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAES 469
T M+D+ +++G + +A+ ++ D + W ++L++ +G +GK A
Sbjct: 287 TAFVGNT-MLDMYAKSGSMIDARKVFERV-LNKDLVTWNSMLTAFAQYG---LGKEAVSH 341
Query: 470 LLEL 473
E+
Sbjct: 342 FEEM 345
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 117/248 (47%), Gaps = 37/248 (14%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
+GVSWN LISG A G A+ V+ M ++G + T+S++ + ++ G+ +
Sbjct: 217 NGVSWNALISGFARKGDGETALMVFAEMQRNGF-EATHFTYSSIFSGLAGIGALEQGKWV 275
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H H++K FVG+ ++DMYAK G + DA++ F+ + K++V +N+M+T
Sbjct: 276 HAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLT-------- 327
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
Q GL +EA+ F EMR G+ ++Q TF +LTAC
Sbjct: 328 -----------------------AFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTAC 364
Query: 185 --GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAES-VFRTMAWKNVV 241
GGL ++EGK I + + + +VD+ + + YA +F+
Sbjct: 365 SHGGL--VKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAA 422
Query: 242 SWTAMLVG 249
W A+L
Sbjct: 423 VWGALLAA 430
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/677 (35%), Positives = 392/677 (57%), Gaps = 57/677 (8%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P ++ WN +I +G ++A+ +Y+ + L TF +++ + ++
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRL-QPDTYTFPSVINACAGLLDFEMA 134
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+ IH +L GFGS +++G+ L+DMY + + A++ F+E+P +++V +N++I+G
Sbjct: 135 KSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNAN 194
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G E+ ++ ++I LF EM + D T S+L
Sbjct: 195 GYWNEALEIY------------------------YQSIKLFMEM-VNQFKPDLLTITSIL 229
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
ACG L LE GK +H ++I + ++ + + L++MY KC ++ ++ VF M K+ V
Sbjct: 230 QACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSV 289
Query: 242 SWTAMLVGYGQNGCSEEAVKIF-----------------------CN--------MQRNG 270
SW +M+ Y QNG +++K+F CN M+ G
Sbjct: 290 SWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEG 349
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
+ PD T+ S++ C+ LA+ +G + HG GL S + V N L+ Y KCG++ +S
Sbjct: 350 VTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSF 409
Query: 331 RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
++F M +D V+WTAL+S +G+ + + F +M + G+ PD V + ++ ACS +G
Sbjct: 410 QVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSG 469
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATL 450
LVE+G +YF M K+Y I P +HY C++D+LSR+ L++A+ FI MP PD+ W L
Sbjct: 470 LVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGAL 529
Query: 451 LSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVR 510
LS+CR+ G+ EI + +E ++EL+P + YVL+S+IYA+ GKWD V +R++++ +G++
Sbjct: 530 LSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLK 589
Query: 511 KDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELS 570
KDPGCSW++ +++V++F +++ L L M KEGY+ ++ VLHD++
Sbjct: 590 KDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDED 649
Query: 571 EKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDA 630
EK +L HSE+LAIAFGLL PG P++V+KNLRVC DCH TKYISKI QRE+LVRDA
Sbjct: 650 EKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDA 709
Query: 631 VRFHLFKNGECSCGDFW 647
RFH+FK+G CSCGD+W
Sbjct: 710 NRFHVFKDGACSCGDYW 726
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 140/287 (48%), Gaps = 11/287 (3%)
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
Q F S+ A + ++H+ II +V + L+ Y + + SVFR
Sbjct: 13 QTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFR 72
Query: 234 TMA-WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
+ NV W +++ NG EA+ ++ QR ++PD +T SVI++CA L E
Sbjct: 73 LASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFE 132
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
H R L G S + + NAL+ Y + +++ + ++F EM +RD VSW +L+SGY
Sbjct: 133 MAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYN 192
Query: 353 KFGKANE-------TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE 405
G NE +I LF +M++ KPD +T+ +L AC G +E G++ + M+
Sbjct: 193 ANGYWNEALEIYYQSIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITS 251
Query: 406 YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
G +I++ ++ G L ++ + M D++ W ++++
Sbjct: 252 -GYECDTTASNILINMYAKCGNLLASQEVFSGMK-CKDSVSWNSMIN 296
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 250/650 (38%), Positives = 373/650 (57%), Gaps = 39/650 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SWN +ISG+ G+ +A L L DGL + +T ++L + +
Sbjct: 211 MPTRDMGSWNAMISGYCQSGNAKEA-----LTLSDGLRAMDSVTVVSLLSACTEAGDFNR 265
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G IH + +K G S +FV + L+D+YA+ G + D ++ FD
Sbjct: 266 GVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDR------------------ 307
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
M +D ISW ++I N AI LF+EMRL + D T S+
Sbjct: 308 -------------MYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISL 354
Query: 181 LTACGGLLALEEGKQIHAFIIRND-HKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+ L + + + F +R +++ +G+A+V MY K + A +VF + K+
Sbjct: 355 ASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKD 414
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG--IEPDDFTLGSVISSCANLASLEEGTQF 297
V+SW ++ GY QNG + EA++++ M+ G I + T SV+ +C+ +L +G +
Sbjct: 415 VISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKL 474
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
HGR L GL + V +L YGKCG ++D+ LF ++ + V W L++ + G
Sbjct: 475 HGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHG 534
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
+ + LF++ML G+KPD +T + +LSACS +GLV++G FE+M +YGI P HY C
Sbjct: 535 EKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGC 594
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
M+D+ RAG+LE A +FI MP PDA W LLS+CR+HGNV++GK A+E L E++P +
Sbjct: 595 MVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEH 654
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
+VLLS++YAS GKW+ V ++R KG+RK PG S ++ ++V +F + + P
Sbjct: 655 VGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMY 714
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
+++Y EL L+ K+ GYVPD VL DVE EK +L HSE+LA+AF L+ P
Sbjct: 715 EEMYRELTALHEKLKMVGYVPDHRFVLQDVEDDEKEHILMSHSERLAMAFALITTPAKTT 774
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
IR+ KNLRVC DCH+ TK+ISKIT+REI+VRD+ RFH FKNG CSCGD+W
Sbjct: 775 IRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 824
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 175/349 (50%), Gaps = 11/349 (3%)
Query: 106 KNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM 165
+N+ + ++ G V +R F + ++D +W MI+G + G E I F
Sbjct: 84 QNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLF 143
Query: 166 RL-EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
L GL D TF SVL AC + +G +IH ++ +V+V ++L+ +YC+ +
Sbjct: 144 MLSSGLQPDYRTFPSVLKACRN---VTDGNKIHCLALKFGFMWDVYVAASLIHLYCRYGA 200
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEP-DDFTLGSVIS 283
+ A +F M +++ SW AM+ GY Q+G ++EA+ + +G+ D T+ S++S
Sbjct: 201 VVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTL-----SDGLRAMDSVTVVSLLS 255
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+C G H S+ GL S + VSN L+ Y + G+++D ++F+ M VRD +S
Sbjct: 256 ACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLIS 315
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
W +++ Y + I LF++M ++PD +TLI + S S+ G + R +
Sbjct: 316 WNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTL 375
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
++ ++ + ++ G ++ A++ N +P D I W T++S
Sbjct: 376 RKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP-NKDVISWNTIIS 423
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 143/266 (53%), Gaps = 12/266 (4%)
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
L+ K +HA ++ ++ NV + + LV++YC ++ A F + ++V +W M+ G
Sbjct: 67 LQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISG 126
Query: 250 YGQNGCSEEAVKIFC-NMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
YG+ G S E ++ F M +G++PD T SV+ +C N+ +G + H +L G +
Sbjct: 127 YGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVT---DGNKIHCLALKFGFMW 183
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
+ V+ +L+ Y + G + ++ LF+EM RD SW A++SGY + G A E + L
Sbjct: 184 DVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEAL-----TL 238
Query: 369 SHGLKP-DEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
S GL+ D VT++ +LSAC+ AG +G +K +G+ +ID+ + G
Sbjct: 239 SDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIK-HGLESELFVSNKLIDLYAEFGS 297
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSS 453
L++ + ++M + D I W +++ +
Sbjct: 298 LKDCQKVFDRM-YVRDLISWNSIIKA 322
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 101/223 (45%), Gaps = 16/223 (7%)
Query: 268 RNGIEPDDFT-LGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
+NG E + + ++ C NL S H R +V+ I + +S LV Y GN+
Sbjct: 46 KNGNESKEIDDVHTLFRYCTNLQS---AKCLHARLVVSNAIQNVCISAKLVNLYCYLGNV 102
Query: 327 EDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK-MLSHGLKPDEVTLIGVLSA 385
+ F+ ++ RD +W ++SGY + G ++E I F MLS GL+PD T VL A
Sbjct: 103 ALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKA 162
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC--MIDILSRAGRLEEAKSFINKMPFPPD 443
C V G + +K +G + D Y +I + R G + A+ ++MP D
Sbjct: 163 CRN---VTDGNKIHCLALK-FGF--MWDVYVAASLIHLYCRYGAVVNARILFDEMP-TRD 215
Query: 444 AIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
W ++S GN + ++ L +D S LLS+
Sbjct: 216 MGSWNAMISGYCQSGNAKEALTLSDGLRAMDSVTVVS--LLSA 256
>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
Length = 694
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/648 (37%), Positives = 366/648 (56%), Gaps = 33/648 (5%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P VS+ ISG A HG A+ + ML+ GL S +S+ +G
Sbjct: 78 PHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIG 137
Query: 62 RQIHGHILKFGFGSY-VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
QIH ++FG+ FV +DMY K G + A+ F E+P
Sbjct: 138 PQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMP---------------- 181
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+++ ++W ++T + +G E I+ + +R G + + +
Sbjct: 182 ---------------NRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAF 226
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
AC G + L G+Q H F+++ + +V V +++VD Y KC+ A +VF M +N
Sbjct: 227 FNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNS 286
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW +M+ Y QNG EEA + +R+G EP DF + S +++CA L L G H
Sbjct: 287 VSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAV 346
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ + + + I V++ALV YGKCG +ED+ ++F E R+ V+W A++ GYA G A
Sbjct: 347 AVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNA 406
Query: 361 IDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ +F+ M+ G P+ +TL+ V+++CSR GL + G FE M + +GI P +HY C++
Sbjct: 407 LLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVV 466
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L RAG E+A I MP P W LL +C++HG E+G+ AAE L ELDP +
Sbjct: 467 DLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSG 526
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
++VLLS+++AS G+W + +R+ M+ G++KDPGCSW+ +K+ VH+F A D ++
Sbjct: 527 NHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNE 586
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
I A L KL ++M GY+PD L+D+E EK + HSEKLA+AFGL+ IPPG+PIR
Sbjct: 587 IQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIR 646
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
++KNLR+C DCH A K+IS I REI+VRD RFH FK +CSCGD+W
Sbjct: 647 IMKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDYW 694
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 161/359 (44%), Gaps = 35/359 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+WN +++ G + ++ Y L++ G + ++ + + L
Sbjct: 180 MPNRNVVAWNAVMTNAVLDGRPLETIEAY-FGLREAGGLPNVVSACAFFNACAGAMYLSL 238
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q HG ++K GF V V + +VD Y K A+ FD + +N V
Sbjct: 239 GEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSV----------- 287
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SW +M+ QNG E EA + R G F S
Sbjct: 288 --------------------SWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSA 327
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LT C GLL L G+ +HA +R+ N+FV SALVDMY KC ++ AE +F +N+
Sbjct: 328 LTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNL 387
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQ-FH 298
V+W AM+ GY G ++ A+ +F +M R+G P+ TL +VI+SC+ ++G + F
Sbjct: 388 VTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFE 447
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGK 356
G+ +V G+ G E ++ + M +R +S W AL+ GK
Sbjct: 448 TMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGK 506
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 2/197 (1%)
Query: 210 FVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN 269
F+ + LV++Y K A + + VVS+TA + G Q+G A+ F M R
Sbjct: 52 FICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRL 111
Query: 270 GIEPDDFTLGSVISSCANLASLEE-GTQFHGRSLVTGLISFIT-VSNALVTFYGKCGNIE 327
G+ P+DFT S + A+ G Q H ++ G + VS A + Y K G ++
Sbjct: 112 GLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLK 171
Query: 328 DSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS 387
+ LF EM R+ V+W A+++ G+ ETI+ + + G P+ V+ +AC+
Sbjct: 172 LARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACA 231
Query: 388 RAGLVEKGRHYFEIMVK 404
A + G + +VK
Sbjct: 232 GAMYLSLGEQFHGFVVK 248
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 249/644 (38%), Positives = 382/644 (59%), Gaps = 40/644 (6%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V W LLI+ + G + V+++ ML DG + S+M+ + V LG+Q+H
Sbjct: 212 VVWTLLITRYVQAGCASKVVELFLHMLDDGF-EPDGYSMSSMISACTELGSVRLGQQLHS 270
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
L+ G S V LVDMYAKL + E+++ E
Sbjct: 271 VALRLGLVSDSCVSCGLVDMYAKLKM------------ERSM----------------EH 302
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGL-EREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
+R++F+ M + +SWT +I+G +Q+G+ E + LFREM E + + T+ ++L AC
Sbjct: 303 ARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACA 362
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
L + G+QIHA +++ VG+ALV MY + ++ A F + N++S +
Sbjct: 363 NLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSP 422
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEP--DDFTLGSVISSCANLASLEEGTQFHGRSLV 303
+ N C+ + G++ FT S++S+ A++ L +G + H S+
Sbjct: 423 DVETERNNAS--------CSSKIEGMDDGVSTFTFASLLSAAASVGLLTKGQKLHALSMK 474
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
G S +SN+LV+ Y +CG +ED+ R F+EM + +SWT+++SG AK G A + + +
Sbjct: 475 AGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSM 534
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F M+ G+KP++VT I VLSACS GLV++G+ +F M K++G+ P +HY C++D+L+
Sbjct: 535 FHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLA 594
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
R+G +EEA+ FIN+MP DA+ W TLLS+CR +GN EIG+ AA ++ L+P +PA YVL
Sbjct: 595 RSGLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIAANHVINLEPRDPAPYVL 654
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LS++YA G WD V+++R MR+K + K+ G SW+ + +H F A D S P + IYA+
Sbjct: 655 LSNLYADAGLWDEVARIRSLMRDKNLSKETGLSWMDVGNTIHEFRAGDTSHPLAIDIYAK 714
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
L L R++ GYVPD S VLHD+ K + L HSEK+A+AFGL+ P+R+ KN
Sbjct: 715 LVTLIREIKDIGYVPDTSIVLHDMSEELKEQYLLQHSEKIAVAFGLITTSATKPMRIFKN 774
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LRVC+DCH+A KYISK T REI++RD+ RFH K+G CSCG++W
Sbjct: 775 LRVCADCHSAIKYISKSTGREIILRDSNRFHRMKDGICSCGEYW 818
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 188/345 (54%), Gaps = 10/345 (2%)
Query: 102 ELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKD-KDSISWTTMITGLMQNGLEREAID 160
E+ + + V+ N+++T + G VE +RR+F M +D +SWT M + L +NG ERE++
Sbjct: 70 EILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAMASCLARNGAERESLR 129
Query: 161 LFREMRLEGLAMDQFTFGSVLTAC--GGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVD 217
L EM GL + FT + AC L L G + F+++ +V VG AL+D
Sbjct: 130 LLGEMLELGLRPNAFTLCAAARACFPQELFRLA-GGVVLGFVLKTGFWGTDVSVGCALID 188
Query: 218 MYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFT 277
M+ + + A+ VF + + V WT ++ Y Q GC+ + V++F +M +G EPD ++
Sbjct: 189 MFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYS 248
Query: 278 LGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCG---NIEDSHRLFN 334
+ S+IS+C L S+ G Q H +L GL+S VS LV Y K ++E + ++F
Sbjct: 249 MSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFK 308
Query: 335 EMNVRDEVSWTALVSGYAKFG-KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVE 393
M + +SWTAL+SGY + G + N + LF +ML+ ++P+ +T +L AC+ +
Sbjct: 309 TMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQD 368
Query: 394 KGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
GR ++K I ++ ++ + + +G +EEA+ +++
Sbjct: 369 SGRQIHAHVLKT-SIAHVNVVGNALVSMYAESGCMEEARKAFDQL 412
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 193/403 (47%), Gaps = 44/403 (10%)
Query: 61 GRQIHGHILKFGF-GSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G + G +LK GF G+ V VG L+DM+A+ G + A+R FD L E+ V++ +IT +
Sbjct: 163 GGVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYV 222
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
Q G + ++LF M +G D ++ S
Sbjct: 223 -------------------------------QAGCASKVVELFLHMLDDGFEPDGYSMSS 251
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK---SIKYAESVFRTMA 236
+++AC L ++ G+Q+H+ +R + V LVDMY K K S+++A VF+TM
Sbjct: 252 MISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMP 311
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAV-KIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
NV+SWTA++ GY Q+G E V +F M I P+ T +++ +CANL+ + G
Sbjct: 312 RHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGR 371
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
Q H L T + V NALV+ Y + G +E++ + F+++ + +S + V
Sbjct: 372 QIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVETERNNA 431
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
+ I+ + +S T +LSA + GL+ KG+ + +K G R
Sbjct: 432 SCSSKIEGMDDGVS------TFTFASLLSAAASVGLLTKGQKLHALSMKA-GFRSDQGIS 484
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
++ + +R G LE+A ++M + I W +++S HG
Sbjct: 485 NSLVSMYARCGYLEDACRAFDEMK-DHNVISWTSIISGLAKHG 526
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 191/374 (51%), Gaps = 50/374 (13%)
Query: 1 MPFHDGVSWNLLISGHASHG-SVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
MP H+ +SW LISG+ G N+ + ++ ML + + + IT+S +L ++ D
Sbjct: 310 MPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESI-RPNHITYSNLLKACANLSDQD 368
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
GRQIH H+LK VG+ LV MYA+ G + +A++ FD+L E NI+ + +
Sbjct: 369 SGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVE--- 425
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
++++ S ++ I G M +G+ FTF S
Sbjct: 426 ---------------TERNNASCSSKIEG-MDDGVS------------------TFTFAS 451
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L+A + L +G+++HA ++ + + + ++LV MY +C ++ A F M N
Sbjct: 452 LLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHN 511
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
V+SWT+++ G ++G +++A+ +F +M G++P+D T +V+S+C+++ ++EG + H
Sbjct: 512 VISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKE-HF 570
Query: 300 RSLVT--GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGK 356
RS+ GL+ + +V + G +E++ + NEM + D + W L+S +G
Sbjct: 571 RSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGN 630
Query: 357 -------ANETIDL 363
AN I+L
Sbjct: 631 TEIGEIAANHVINL 644
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/541 (42%), Positives = 343/541 (63%)
Query: 107 NIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR 166
++ + N +I + G VE +R++F GM ++ +SW TMI +N +E EA+D+F EMR
Sbjct: 97 DVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMR 156
Query: 167 LEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIK 226
EG +FT SVL+ACG E K++H ++ N++VG+AL+D+Y KC I
Sbjct: 157 NEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMIN 216
Query: 227 YAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCA 286
A VF +M K+ V+W++M+ GY Q+ EEA+ ++ QR +E + FTL SVI +C+
Sbjct: 217 DAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACS 276
Query: 287 NLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTA 346
NLA+L EG Q H +G S + V+++ V Y KCG++ +S+ +F+E+ ++ W
Sbjct: 277 NLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNT 336
Query: 347 LVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY 406
++SG+AK + E + LFEKM G+ P+EVT +LS C GLVE+GR +F++M Y
Sbjct: 337 IISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTY 396
Query: 407 GIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWA 466
G+ P HY+CM+DIL RAG L EA I +PF P A W +LL+SCR+ N+E+ + A
Sbjct: 397 GLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLASCRVCKNLELAEVA 456
Query: 467 AESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHI 526
A+ L EL+P N ++VLLS+IYA+ +W+ +++ R+ +R+ V+K G SWI K +VHI
Sbjct: 457 AKKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGQSWIDIKDKVHI 516
Query: 527 FSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIA 586
F + S P +I L+ L ++ K GY P + LHDVE+ +K ++L HSEKLA+
Sbjct: 517 FRVGESSHPRIREICTMLDNLVIELRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALV 576
Query: 587 FGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDF 646
FGL+ +P G +R++KNLR+C DCH K S T+R I+VRDA RFH F +G CSCG+F
Sbjct: 577 FGLMCLPEGSTVRIMKNLRICVDCHEFMKAASMATRRFIIVRDANRFHHFSDGHCSCGEF 636
Query: 647 W 647
W
Sbjct: 637 W 637
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 172/346 (49%), Gaps = 34/346 (9%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSWN +I + + ++A+ ++ M +G S T S++L + +++H
Sbjct: 130 VSWNTMIGLYTRNRMESEALDIFWEMRNEGF-KFSEFTISSVLSACGANCDALECKKLHC 188
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+K ++VG+ L+D+YAK G+I DA + F+ + +K+ V +++M+ G ++ E
Sbjct: 189 LSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYE- 247
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
EA+ L+R + L +QFT SV+ AC
Sbjct: 248 ------------------------------EALLLYRRAQRMSLEQNQFTLSSVICACSN 277
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L AL EGKQ+HA I ++ NVFV S+ VDMY KC S++ + +F + KN+ W +
Sbjct: 278 LAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTI 337
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT-G 305
+ G+ ++ +E + +F MQ++G+ P++ T S++S C + +EEG +F T G
Sbjct: 338 ISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYG 397
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSG 350
L + + +V G+ G + +++ L + S W +L++
Sbjct: 398 LSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLAS 443
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 129/255 (50%), Gaps = 1/255 (0%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
F +L C A+ E K H +R + + +V + + L++ Y KC ++ A VF M
Sbjct: 66 FIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGML 125
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
+++VSW M+ Y +N EA+ IF M+ G + +FT+ SV+S+C E +
Sbjct: 126 ERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKK 185
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H S+ T L + V AL+ Y KCG I D+ ++F M + V+W+++V+GY +
Sbjct: 186 LHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKN 245
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
E + L+ + L+ ++ TL V+ ACS + +G+ + +++ G +
Sbjct: 246 YEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAV-IRKSGFGSNVFVAS 304
Query: 417 CMIDILSRAGRLEEA 431
+D+ ++ G L E+
Sbjct: 305 SAVDMYAKCGSLRES 319
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 122/252 (48%), Gaps = 36/252 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M V+W+ +++G+ + +A+ +Y + L ++ T S+++ S+ +
Sbjct: 225 MQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQ-NQFTLSSVICACSNLAALIE 283
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H I K GFGS VFV S VDMYAK G + ++ F E+ EKNI ++NT+I+G +
Sbjct: 284 GKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAK 343
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ +E + LF +M+ +G+ ++ TF S+
Sbjct: 344 -------------------------------HARPKEVMILFEKMQQDGMHPNEVTFSSL 372
Query: 181 LTACGGLLALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
L+ CG +EEG++ ++R + NV S +VD+ + + A + +++ ++
Sbjct: 373 LSVCGHTGLVEEGRRFFK-LMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFE 431
Query: 239 NVVS-WTAMLVG 249
S W ++L
Sbjct: 432 PTASIWGSLLAS 443
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 233/634 (36%), Positives = 370/634 (58%), Gaps = 33/634 (5%)
Query: 14 SGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGF 73
SG A S + ++ +L+L L R+ S + + S+ R IH H+ +
Sbjct: 35 SGPACSSSSSSGLRELDLLLTGELAPTPRVYHSIITACAQSKNLAG-ARAIHSHLSRSRL 93
Query: 74 GSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRG 133
F+ + L+ MY K G + DA R +F G
Sbjct: 94 AGDGFLLNSLIHMYCKCGAVSDA-------------------------------RHVFDG 122
Query: 134 MKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEG 193
+ +D +SWT +ITG QN + EA+ L +M FTF S L A G G
Sbjct: 123 IPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIG 182
Query: 194 KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQN 253
+Q+HA ++ + ++V+VGSAL+DMY +C+ + A VF + KN VSW A++ G+ +
Sbjct: 183 EQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARK 242
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVS 313
G E + F MQRNG FT SV S+ A + +LE+G H + +G V+
Sbjct: 243 GDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVA 302
Query: 314 NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLK 373
N ++ Y K G++ D+ ++F+ ++ RD V+W +++ +A++G E + FE++ +G++
Sbjct: 303 NTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQ 362
Query: 374 PDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKS 433
+++T + VL+ACS GLV++G+ YF++M K+Y + P DHY +D+L RAG L+EA
Sbjct: 363 LNQITFLSVLTACSHGGLVKEGKQYFDMM-KDYNVEPEIDHYVSFVDLLGRAGLLKEALI 421
Query: 434 FINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGK 493
F+ KMP P A W LL +CR+H N +IG++AA+ + ELDP + VLL +IYAS G+
Sbjct: 422 FVFKMPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYASTGQ 481
Query: 494 WDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIK 553
WD +++R+ M+ GV+K+P CSW++ ++ VH+F ADD + P S++IY E++N ++ K
Sbjct: 482 WDDAARVRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPKSEEIYRMWEEVNTRIKK 541
Query: 554 EGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNA 613
GYVP+ VL ++ E+ L +HSEK+A+AF L+ +P G IR++KN+R+C DCH+A
Sbjct: 542 AGYVPNTDYVLLHIKEQERETKLQYHSEKIALAFALINMPAGATIRIMKNIRICGDCHSA 601
Query: 614 TKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+Y+S++ +REI+VRD RFH F NG CSCGD+W
Sbjct: 602 FRYVSEVFKREIVVRDTNRFHHFSNGSCSCGDYW 635
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 149/297 (50%), Gaps = 32/297 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VSW LI+G+A + +A+ + ML+ S TF++ L + + +
Sbjct: 123 IPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARF-RPSGFTFTSFLKAAGACGGRGI 181
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+H +K+ V+VGS L+DMYA+ + A R FD L KN V +N +I G R
Sbjct: 182 GEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFAR 241
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+G E T LM+ F EM+ G FT+ SV
Sbjct: 242 KGDGE---------------------TTLMK----------FAEMQRNGFGATHFTYSSV 270
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+A + ALE+G+ +HA +I++ K FV + ++ MY K S+ A VF + +++
Sbjct: 271 FSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDL 330
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
V+W ML + Q G +EAV F +++ GI+ + T SV+++C++ ++EG Q+
Sbjct: 331 VTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQY 387
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/563 (43%), Positives = 348/563 (61%), Gaps = 11/563 (1%)
Query: 87 YAKL-GLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTM 145
Y K+ G + +A FD++PE + V YN M+ LR V+ + F M KD SW T+
Sbjct: 114 YTKVAGKVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDIASWNTL 173
Query: 146 ITGLMQNGLEREAIDLFREM-RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRND 204
I+G QNG ++A DLF M G++ G V G L A EE + +N
Sbjct: 174 ISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYV--EHGDLEAAEE-------LYKNV 224
Query: 205 HKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFC 264
+V V +A++ Y K ++ AE +F+ MA KN+V+W +M+ GY +N +E+ +K+F
Sbjct: 225 GMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFK 284
Query: 265 NMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCG 324
M + + P+ +L SV+ C+NL++L G Q H + L T +L++ Y KCG
Sbjct: 285 TMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCG 344
Query: 325 NIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
+++ + +LF EM +D ++W A++SGYA+ G + + LF+KM + +KPD +T + V+
Sbjct: 345 DLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVIL 404
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDA 444
AC+ AG V+ G YF+ M KE+GI HYTC+ID+L RAGRL+EA S I +MPF P A
Sbjct: 405 ACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFTPHA 464
Query: 445 IGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTM 504
+ TLL +CRIH N+++ ++AA +LL LDP + YV L++IYA+ KWD V+++R+ M
Sbjct: 465 AIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMM 524
Query: 505 REKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVL 564
+E V K PG SWI+ KS H F + D P I+ +L +L+ KM GYVPD+ L
Sbjct: 525 KEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFAL 584
Query: 565 HDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQRE 624
HDVE K K+L HSEKLAIAFGL+ PG PIRV KNLRVC DCH A K+IS I +RE
Sbjct: 585 HDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGDCHRAIKFISAIEKRE 644
Query: 625 ILVRDAVRFHLFKNGECSCGDFW 647
I+VRD RFH F+NG CSCGD+W
Sbjct: 645 IIVRDTTRFHHFRNGFCSCGDYW 667
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 187/419 (44%), Gaps = 56/419 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLML-KDGLGNLSRITFSTMLIMSSSRRCVD 59
MP D SWN LISG A +G + A ++++M K+G+
Sbjct: 162 MPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVS--------------------- 200
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
S ++ Y + G + A+ + + K++V+ M+TG +
Sbjct: 201 --------------------WSAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYM 240
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ G VE + R+F+ M K+ ++W +MI G ++N + + +F+ M + + + S
Sbjct: 241 KFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSS 300
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL C L AL G+Q+H + ++ + ++L+ MYCKC + A +F M K+
Sbjct: 301 VLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKD 360
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FH 298
V++W AM+ GY Q+G +A+ +F M+ ++PD T +VI +C + ++ G Q F
Sbjct: 361 VITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFK 420
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G+ + ++ G+ G ++++ L EM + + G + K
Sbjct: 421 SMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFTPHAAIYGTLLGACRIHK-- 478
Query: 359 ETIDLFEKMLSHGLKPDE------VTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
+DL E + L D V L + +A ++ V K R M+KE+ + I
Sbjct: 479 -NLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRK----MMKEHNVVKI 532
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 84/164 (51%), Gaps = 20/164 (12%)
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF-GKANETIDLFEKML 368
++++ + +F C ++E + +F +M+VR V+W ++SGY K GK E +LF+K+
Sbjct: 74 VSLNKTIASFVRAC-DLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKI- 131
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD--HYTCMIDILSRAG 426
+PD V+ +L R+ V+ +F M P+ D + +I ++ G
Sbjct: 132 ---PEPDSVSYNIMLVCYLRSYGVKAALAFFNKM-------PVKDIASWNTLISGFAQNG 181
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL 470
++++A + MP + + W+ ++S HG++E AAE L
Sbjct: 182 QMQKAFDLFSVMP-EKNGVSWSAMISGYVEHGDLE----AAEEL 220
>gi|22328607|ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635650|sp|O23266.3|PP308_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14050, mitochondrial; Flags: Precursor
gi|332657965|gb|AEE83365.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 245/634 (38%), Positives = 369/634 (58%), Gaps = 66/634 (10%)
Query: 49 LIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNI 108
L + + R + + +H HI+K G + + LV++Y K G A + FDE+P +
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHR-- 67
Query: 109 VMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE 168
D I+W +++T L Q L + + +F +
Sbjct: 68 -----------------------------DHIAWASVLTALNQANLSGKTLSVFSSVGSS 98
Query: 169 G-LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY 227
L D F F +++ AC L +++ G+Q+H I +++ ++ V S+LVDMY KC +
Sbjct: 99 SGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNS 158
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVK-------------------------- 261
A++VF ++ KN +SWTAM+ GY ++G EEA++
Sbjct: 159 AKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKG 218
Query: 262 -----IFCNMQRNGIEP-DDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNA 315
+F M+R ++ D L S++ +CANLA+ G Q HG + G S + +SNA
Sbjct: 219 LEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNA 278
Query: 316 LVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPD 375
L+ Y KC ++ + +F+ M RD VSWT+L+ G A+ G+A + + L++ M+SHG+KP+
Sbjct: 279 LIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPN 338
Query: 376 EVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFI 435
EVT +G++ ACS G VEKGR F+ M K+YGIRP HYTC++D+L R+G L+EA++ I
Sbjct: 339 EVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLI 398
Query: 436 NKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL-ELDPYNPASYVLLSSIYASKGKW 494
+ MPFPPD WA LLS+C+ G ++G A+ L+ +P++Y+LLS+IYAS W
Sbjct: 399 HTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLW 458
Query: 495 DHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKM-IK 553
VS+ RR + E VRKDPG S ++ + +F A + S P + I+ L+KL +M I+
Sbjct: 459 GKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIR 518
Query: 554 EGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNA 613
GYVPD S +LHD++ EK K+L HSE+ A+A+GLL PG PIR+VKNLRVC DCH
Sbjct: 519 NGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVV 578
Query: 614 TKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
K+IS+IT+REI+VRDA R+H FK G+CSC DFW
Sbjct: 579 LKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 210/402 (52%), Gaps = 6/402 (1%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D ++W +++ + V++ + FS ++ ++ +D
Sbjct: 64 MPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDH 123
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H H + + + V S LVDMYAK GL+ AK FD + KN + + M++G +
Sbjct: 124 GRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAK 183
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL-AMDQFTFGS 179
G EE+ LFR + K+ SWT +I+G +Q+G EA +F EMR E + +D S
Sbjct: 184 SGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSS 243
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
++ AC L A G+Q+H +I VF+ +AL+DMY KC + A+ +F M ++
Sbjct: 244 IVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRD 303
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FH 298
VVSWT+++VG Q+G +E+A+ ++ +M +G++P++ T +I +C+++ +E+G + F
Sbjct: 304 VVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQ 363
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALVSGYAKFGKA 357
+ G+ + L+ G+ G ++++ L + M DE +W AL+S + G+
Sbjct: 364 SMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRG 423
Query: 358 NETIDLFEKMLSHGLKPDEVTLI---GVLSACSRAGLVEKGR 396
I + + ++S D T I + ++ S G V + R
Sbjct: 424 QMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEAR 465
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 243/644 (37%), Positives = 371/644 (57%), Gaps = 34/644 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VS+N++I+G+A++G +A++++ M G S TF+ ++ S G+QI
Sbjct: 205 DSVSFNVMITGYANNGLNEEAIELFVEMQNLGF-KPSDFTFAAVISASVGLDDTAFGQQI 263
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG ++K F VFVG+ +D Y+K V
Sbjct: 264 HGFVVKTSFIRNVFVGNAFLDFYSK-------------------------------HDCV 292
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
E R+LF M + D +S+ +IT G +E+IDLF+E++ F F ++L+
Sbjct: 293 NEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIA 352
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L L+ G+Q+HA ++ + + V ++LVDMY KC + A+ +F ++ ++ V WT
Sbjct: 353 ASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWT 412
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
AM+ Q G E +K+F M+R + D T V+ + ANLAS+ G Q H + +
Sbjct: 413 AMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRS 472
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G ++ + AL+ Y C +I+D+ + F EM+ R+ V+W AL+S YA+ G T+ F
Sbjct: 473 GFMN-VYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSF 531
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
E+M+ G +PD V+ + +L+ACS LVE+G YF M Y + P +HYT M+D L R
Sbjct: 532 EEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCR 591
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY-NPASYVL 483
+GR +EA+ + +MPF PD I W ++L+SCRIH N + + AA L + + A YV
Sbjct: 592 SGRFDEAEKLMGQMPFEPDEIVWTSVLNSCRIHKNYALARKAAGQLFNMKVLRDAAPYVT 651
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
+S+I+A G+WD V ++++ MR++GVRK P SW++ K +VH+FSA+D P +I +
Sbjct: 652 MSNIFAEAGQWDSVVKVKKAMRDRGVRKLPAYSWVEIKHKVHVFSANDDKHPQQLEILRK 711
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
+E L +M KEGY PD+S +V+ KI L +HSE+LAIAF L+ P G PI V+KN
Sbjct: 712 IEMLAEQMEKEGYDPDISCAHQNVDKESKIDSLKYHSERLAIAFALINTPEGSPILVMKN 771
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LR C+DCH A K ISKI REI VRD+ RFH F++G CSCGD+W
Sbjct: 772 LRACTDCHAAIKVISKIVGREITVRDSNRFHHFRDGSCSCGDYW 815
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 197/402 (49%), Gaps = 4/402 (0%)
Query: 52 SSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMY 111
+SSR+ L I I+K GF + ++ ++ G + A++ D++P +N
Sbjct: 20 ASSRQT--LQTCIDARIVKTGFDPITSRFNFMIKDLSERGQLCQARQLLDQMPNRNSFSI 77
Query: 112 NTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLA 171
+ +I+G ++ G + +RR+F ++ ++WTTMI ++ +A LF EM G
Sbjct: 78 DIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQ 137
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
D T+ ++LT C L +E Q HA I++ H N V + L+D Y K + A +
Sbjct: 138 PDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRL 197
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASL 291
F M + VS+ M+ GY NG +EEA+++F MQ G +P DFT +VIS+ L
Sbjct: 198 FLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDT 257
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
G Q HG + T I + V NA + FY K + + +LFNEM D VS+ +++ Y
Sbjct: 258 AFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAY 317
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
A GK E+IDLF+++ +LS + + ++ GR +V P
Sbjct: 318 AWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMA-DPD 376
Query: 412 HDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
++D+ ++ G+ EEA ++ + W ++S+
Sbjct: 377 FRVSNSLVDMYAKCGKFEEADRIFLRLS-SRSTVPWTAMISA 417
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 134/496 (27%), Positives = 237/496 (47%), Gaps = 19/496 (3%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTML-IMSSSRRCVD 59
MP + S +++ISG+ G++ A +++ D + + ++TM+ S S R D
Sbjct: 69 MPNRNSFSIDIIISGYVKSGNLTVARRIF-----DDTDERTVVAWTTMIGAYSKSNRFGD 123
Query: 60 ---LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEK-NIVMYNTMI 115
L ++H + + +Y+ + + D+ L Y A +L N + NT++
Sbjct: 124 AFKLFAEMHRSGSQPDYVTYITLLTGCNDLEVAKEL-YQAHAQIVKLGHHLNHRVCNTLL 182
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
+ G ++ +RRLF M DS+S+ MITG NGL EAI+LF EM+ G F
Sbjct: 183 DSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDF 242
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
TF +V++A GL G+QIH F+++ NVFVG+A +D Y K + +F M
Sbjct: 243 TFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEM 302
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
+ VS+ ++ Y G +E++ +F +Q + +F +++S A+ L+ G
Sbjct: 303 PELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGR 362
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
Q H + +V+ VSN+LV Y KCG E++ R+F ++ R V WTA++S + G
Sbjct: 363 QLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRG 422
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
+ LF +M + D+ T VL A + + G+ +++ G ++
Sbjct: 423 LHENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRS-GFMNVYSG- 480
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLE--L 473
++D+ + +++A +M + + W LLS+ +G+ GK +S E +
Sbjct: 481 CALLDMYANCASIKDAIKTFEEMS-ERNVVTWNALLSAYAQNGD---GKGTLKSFEEMIM 536
Query: 474 DPYNPASYVLLSSIYA 489
Y P S L + A
Sbjct: 537 SGYQPDSVSFLCILTA 552
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 250/644 (38%), Positives = 377/644 (58%), Gaps = 44/644 (6%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V W LLIS + +AV+++ L+DG R T S+M+ + V LG Q+H
Sbjct: 220 VVWTLLISRYVQGECAEEAVELFLDFLEDGF-EPDRYTMSSMISACTELGSVRLGLQLHS 278
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
L+ G S V LVDMYAK NI ++
Sbjct: 279 LALRMGLASDACVSCGLVDMYAK----------------SNIGQ------------AMDY 310
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGL-EREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
+ ++F M D ISWT +I+G +Q+G+ E + + LF EM E + + T+ S+L +C
Sbjct: 311 ANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCA 370
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
+ + G+Q+HA +I+++ VG+ALV MY + ++ A VF + ++++
Sbjct: 371 SISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIP--- 427
Query: 246 MLVGYGQNGCSEEAVKIFCNMQ--RNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
C E + + R + T S+IS+ A++ L +G Q H SL
Sbjct: 428 ---------CITEGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLK 478
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
G S VSN+LV+ Y +CG +ED+ R FNE+ R+ +SWT+++SG AK G A + L
Sbjct: 479 AGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSL 538
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F M+ G+KP++VT I VLSACS GLV +G+ YF M +++G+ P +HY CM+D+L+
Sbjct: 539 FHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLA 598
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
R+G ++EA FIN+MP DA+ W TLL +CR H N+E+G+ A++++EL+P +PA YVL
Sbjct: 599 RSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAPYVL 658
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LS++YA G WD V+++R MR+ + K+ G SW++ ++ H F A D S P + IY +
Sbjct: 659 LSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGK 718
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
L+ L R++ GYVPD S VLHD+ K + L HSEK+A+AFGL+ PIR+ KN
Sbjct: 719 LDTLVRQIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKN 778
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LRVC+DCH+A KY+SK T+REI++RD+ RFH K+GECSCG++W
Sbjct: 779 LRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/347 (32%), Positives = 184/347 (53%), Gaps = 14/347 (4%)
Query: 102 ELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKD-KDSISWTTMITGLMQNGLEREAID 160
+L +++ V+ N+++T R G V +R +F GM+ +D +SWT M + L +NG ER ++
Sbjct: 78 DLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERGSLL 137
Query: 161 LFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHK-----DNVFVGSAL 215
L EM GL + +T + AC E + ++ HK +V VGSAL
Sbjct: 138 LIGEMLESGLLPNAYTLCAAAHAC---FPHELYCLVGGVVLGLVHKMGLWGTDVAVGSAL 194
Query: 216 VDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDD 275
+DM + + A VF + K VV WT ++ Y Q C+EEAV++F + +G EPD
Sbjct: 195 IDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFLEDGFEPDR 254
Query: 276 FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKC--GNIED-SHRL 332
+T+ S+IS+C L S+ G Q H +L GL S VS LV Y K G D ++++
Sbjct: 255 YTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKV 314
Query: 333 FNEMNVRDEVSWTALVSGYAKFG-KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGL 391
F M D +SWTAL+SGY + G + N+ + LF +ML+ +KP+ +T +L +C+
Sbjct: 315 FERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISD 374
Query: 392 VEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
+ GR ++K H ++ + + +G +EEA+ N++
Sbjct: 375 HDSGRQVHAHVIKS-NQASAHTVGNALVSMYAESGCMEEARRVFNQL 420
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 142/316 (44%), Gaps = 76/316 (24%)
Query: 1 MPFHDGVSWNLLISGHASHG-SVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
MP +D +SW LISG+ G N + ++ ML + + + IT+S++L +S D
Sbjct: 318 MPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESI-KPNHITYSSILKSCASISDHD 376
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIV---------- 109
GRQ+H H++K S VG+ LV MYA+ G + +A+R F++L E++++
Sbjct: 377 SGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIPCITEGRDFP 436
Query: 110 ---------------MYNTMITGLLRRGLVEESRRL------------------------ 130
+ ++I+ G++ + ++L
Sbjct: 437 LDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYS 496
Query: 131 -----------FRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
F +KD++ ISWT+MI+GL ++G A+ LF +M L G+ + T+ +
Sbjct: 497 RCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIA 556
Query: 180 VLTACGGLLALEEGKQI-------HAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
VL+AC + + EGK+ H I R +H + +VD+ + +K A
Sbjct: 557 VLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHY------ACMVDLLARSGIVKEALEFI 610
Query: 233 RTMAWK-NVVSWTAML 247
M K + + W +L
Sbjct: 611 NEMPLKADALVWKTLL 626
>gi|326524233|dbj|BAK00500.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 688
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 249/647 (38%), Positives = 369/647 (57%), Gaps = 43/647 (6%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P +W +I+G A G D + + ML +G + + +L S V+ G
Sbjct: 79 PKRSAAAWTAVIAGCARAGRHADGMGAFAEMLAEGGAAPNAFVLAAVLRCCSGLGDVESG 138
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
++IHG +L+ G + + ++DMYAK G KR F + E + V +N +I+ L+
Sbjct: 139 KRIHGWLLRNGVHLDRVLCNAVLDMYAKSGDYELTKRAFRAMVEVDAVSWNIVISACLQS 198
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G + S +LF +D+ SW T+I+GLM+NG +A+D M G+ + +T+ + L
Sbjct: 199 GDILGSTQLFDESPVRDTSSWNTIISGLMRNGCAAKALDRLYHMARAGVEFNHYTYSTAL 258
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
G L L+ G+Q+H ++ + + + FV S+L+DMYCKC SIK A VF W ++
Sbjct: 259 ALAGMLSMLDLGRQLHGRVLTSALEADAFVRSSLMDMYCKCSSIKTAVLVFER--WSHLT 316
Query: 242 -----SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
+W+ M+ GY QNG EEA + F M G+ D FTL S +++CAN +E+G
Sbjct: 317 GDMKFAWSTMIAGYVQNGREEEAFEFFRLMLCEGVAADQFTLTSAVAACANAGMVEQG-- 374
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
R+F+ ++ WT+++ YA GK
Sbjct: 375 ----------------------------------RMFDIAPTKNVALWTSMLCSYASHGK 400
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
I LF +M + +KP+EVTL+GVLSACS LV +G H+F++M +EYGI P +HY
Sbjct: 401 GRMAIKLFNRMTAEKIKPNEVTLVGVLSACSHGRLVSEGEHFFKLMQEEYGIVPSIEHYN 460
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY 476
CM+D+ RAG L++A FIN+ ++I W TLLS+CR+H ++E K A+ESL++L+
Sbjct: 461 CMVDLYGRAGLLDKANIFINENKIKHESIVWKTLLSACRVHKDMEHAKLASESLIQLEQC 520
Query: 477 NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPY 536
+ SYV+LS++YA+ KW S+LR M E+GVRK PG SWI K+ VH F A D + P
Sbjct: 521 DAGSYVMLSNMYATHSKWRDTSKLRSLMLERGVRKQPGRSWIHLKNTVHTFVAGDAAHPR 580
Query: 537 SDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGL 596
S +IY LEKL ++ + GY + V HDVE ++ L HSEKLA+AFG++ P G
Sbjct: 581 SSEIYTYLEKLMERLKELGYTSRIDLVAHDVEEEQRETALKFHSEKLAMAFGIISTPSGT 640
Query: 597 PIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSC 643
P+R+ KNLR+C DCH A KY+S+ T REI+VRD RFH FK+ +CSC
Sbjct: 641 PLRIFKNLRICVDCHEAIKYVSRATDREIVVRDLYRFHHFKDAKCSC 687
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 240/647 (37%), Positives = 371/647 (57%), Gaps = 32/647 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D V+W ++I G+A G N+++ ++ M ++G+ ++ T++ + +
Sbjct: 91 MQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVP-DKVAMVTVVFACAKLGAMHK 149
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
R I +I + F V +G+ ++DMYAK G
Sbjct: 150 ARIIDDYIQRKKFQLDVILGTAMIDMYAKCGC---------------------------- 181
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
VE +R +F M++K+ ISW+ MI +G R+A+DLFR M G+ D+ T S+
Sbjct: 182 ---VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASL 238
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L L+ G+ IH + + + FV +ALVDMY KC+ I+ A +F M +++
Sbjct: 239 LYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDL 298
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+WT M+ GY + G + E++ +F M+ G+ PD + +V+ +CA L ++ +
Sbjct: 299 VTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDY 358
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ + A++ + KCG +E + +F+ M ++ +SW+A+++ Y G+ +
Sbjct: 359 IQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKA 418
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+DLF ML G+ P+++TL+ +L ACS AGLVE+G +F +M ++Y +R HYTC++D
Sbjct: 419 LDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVD 478
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAGRL+EA I M D W L +CR H +V + + AA SLLEL P NP
Sbjct: 479 LLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGH 538
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
Y+LLS+IYA+ G+W+ V++ R M ++ ++K PG +WI+ ++ H FS D + P S +I
Sbjct: 539 YILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEI 598
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y L+ L K+ GYVPD + VLHDV+ KI +L HSEKLAIAFGL+ P PIR+
Sbjct: 599 YEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRI 658
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+KNLRVC DCH K +S IT R I+VRDA RFH FK G CSCGD+W
Sbjct: 659 IKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 705
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 140/411 (34%), Positives = 221/411 (53%), Gaps = 40/411 (9%)
Query: 55 RRCVDL-----GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIV 109
R C DL GR IH + KFG FV + LVDMY K I
Sbjct: 38 RACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREI---------------- 81
Query: 110 MYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG 169
E++R LF M+++D ++WT MI G + G E++ LF +MR EG
Sbjct: 82 ---------------EDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEG 126
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
+ D+ +V+ AC L A+ + + I +I R + +V +G+A++DMY KC ++ A
Sbjct: 127 VVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAR 186
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
+F M KNV+SW+AM+ YG +G +A+ +F M +G+ PD TL S++ +C++L
Sbjct: 187 EIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLK 246
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
+L+ G H GL V ALV YGKC IED+ LF++M RD V+WT ++
Sbjct: 247 NLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIG 306
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE-IMVKEYGI 408
GYA+ G ANE++ LF+KM G+ PD+V ++ V+ AC++ G + K R + I K++ +
Sbjct: 307 GYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQL 366
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
I T MID+ ++ G +E A+ ++M + I W+ ++++ HG
Sbjct: 367 DVILG--TAMIDMHAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYHGQ 414
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 180/352 (51%), Gaps = 17/352 (4%)
Query: 145 MITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRND 204
M+ G + G FRE+ G D +T V+ AC L L+ G+ IH + +
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 205 HKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFC 264
+ FV +ALVDMY KC+ I+ A +F M +++V+WT M+ GY + G + E++ +F
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 265 NMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCG 324
M+ G+ PD + +V+ +CA L ++ + + + A++ Y KCG
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180
Query: 325 NIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
+E + +F+ M ++ +SW+A+++ Y G+ + +DLF MLS G+ PD++TL +L
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 240
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC--MIDILSRAGRLEEAKSFINKMPFPP 442
ACS ++ GR I+ K +G+ DH+ C ++D+ + +E+A+ +KMP
Sbjct: 241 ACSDLKNLQMGRLIHHIVYK-FGLDL--DHFVCAALVDMYGKCREIEDARFLFDKMP-ER 296
Query: 443 DAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN-----PASYVLLSSIYA 489
D + W + I G E G A ESL+ D P +++ ++A
Sbjct: 297 DLVTWTVM-----IGGYAECGN-ANESLVLFDKMREEGVVPDKVAMVTVVFA 342
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 251/644 (38%), Positives = 366/644 (56%), Gaps = 45/644 (6%)
Query: 49 LIMSSSRRC--VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-- 104
L+ ++ + C + L R +H G FV S L+ Y +LG +A+ FD +P
Sbjct: 22 LLPTAFKSCPTLPLARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARALFDGMPRP 81
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMK-----DKDSISWTTMITGLMQNGLEREAI 159
++ +V ++ ++ RG E + RL M+ + + I+W +++GL ++G R+A+
Sbjct: 82 QRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAV 141
Query: 160 DLFREMRLEGLAM-DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDM 218
M EGL D L+A G + + G+Q+H + ++ + + V +AL+DM
Sbjct: 142 VALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDM 201
Query: 219 YCKCKSIKYAESVFRTMAWK-----------------------------------NVVSW 243
Y KC VF + NVVSW
Sbjct: 202 YGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSW 261
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
T+++ QNG EAV+ F MQ G EP+ T+ V+ + AN+A+L G H +L
Sbjct: 262 TSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALR 321
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
G + + VS+ALV Y KCG ++D+ +F+ M R+ VSW A++ GYA +G+A + +
Sbjct: 322 KGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWM 381
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F ML KPD VT +L+AC++AGL E+GRHYF+ M EYG+ P +HY CM+ +L
Sbjct: 382 FHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLG 441
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
RAG+L+EA I+ MPF PDA W +LL SCR+HGNV++ + AAE L L+P N +YVL
Sbjct: 442 RAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPENAGNYVL 501
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LS+IYASK WD V+++R M++ G++K+ GCSWI+ K++VH+ A D S P I +
Sbjct: 502 LSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEIKNKVHMLLAGDDSHPMMTAIIEK 561
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
+ +LN +M K G+VP VLHDVE EK +L HSEKLA+A GL+ PG +RV+KN
Sbjct: 562 INQLNIQMRKLGFVPSTDFVLHDVEEQEKDDILAVHSEKLAVALGLISTSPGTTLRVIKN 621
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LR+C DCH A K+IS REI VRD RFH F G+CSCGDFW
Sbjct: 622 LRICGDCHEAMKFISSFEGREISVRDTNRFHHFSGGKCSCGDFW 665
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 119/375 (31%), Positives = 185/375 (49%), Gaps = 8/375 (2%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
++WN L+SG G DAV M +GL S L V +G+Q+HG
Sbjct: 122 ITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHG 181
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+ +K G + V + L+DMY K G + R FDE ++ N +I GL R V E
Sbjct: 182 YAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCE 241
Query: 127 SRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
+ RLF+ D+ + +SWT+++ +QNG + EA++ FREM+ +G + T VL
Sbjct: 242 ALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLP 301
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
A + AL G+ H F +R +V+V SALVDMY KC +K A +F TM +NVVS
Sbjct: 302 AFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVS 361
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHGRS 301
W AM+ GY G + AV +F +M + +PD T ++++C EEG F
Sbjct: 362 WNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMH 421
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKANET 360
G+ + +VT G+ G +++++ L ++M D W +L+ G +
Sbjct: 422 NEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLA 481
Query: 361 IDLFEKMLSHGLKPD 375
EK+ L+P+
Sbjct: 482 EVAAEKLFH--LEPE 494
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/644 (38%), Positives = 372/644 (57%), Gaps = 54/644 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +SWN +ISG+ S+G + +Y M+ G+ ++ T ++L+ ++ + LG+ +
Sbjct: 215 DVISWNSMISGYVSNGLTERGLGIYKQMMYLGI-DVDLATIISVLVGCANSGTLSLGKAV 273
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +K F + + L+DMY+K G +
Sbjct: 274 HSLAIKSSFERRINFSNTLLDMYSKCGDL------------------------------- 302
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ + R+F M +++ +SWT+MI G ++G AI L ++M EG+ +D S+L AC
Sbjct: 303 DGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHAC 362
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+L+ GK +H +I N+ + N+FV +AL+DMY KC S++ A SVF TM K+++SW
Sbjct: 363 ARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWN 422
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
M+ ++PD T+ V+ +CA+L++LE G + HG L
Sbjct: 423 TMI---------------------GELKPDSRTMACVLPACASLSALERGKEIHGYILRN 461
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G S V+NALV Y KCG + + LF+ + +D VSWT +++GY G NE I F
Sbjct: 462 GYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATF 521
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+M G++PDEV+ I +L ACS +GL+E+G +F IM ++ I P +HY CM+D+LSR
Sbjct: 522 NEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSR 581
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
G L +A FI +P PDA W LL CR + ++E+ + AE + EL+P N YVLL
Sbjct: 582 TGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLL 641
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF-SADDWSSPYSDQIYAE 543
++IYA KW+ V +LR + ++G+RK+PGCSWI+ K +V++F S ++ S P+S I +
Sbjct: 642 ANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESL 701
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
L+K+ RKM +EG+ P L + + +K L HSEKLA+AFGLL +PP IRV KN
Sbjct: 702 LKKMRRKMKEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKN 761
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LRVC DCH K++SK T+REI++RD RFH FK+G CSC FW
Sbjct: 762 LRVCGDCHEMAKFMSKETRREIVLRDPNRFHHFKDGYCSCRGFW 805
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/475 (26%), Positives = 227/475 (47%), Gaps = 46/475 (9%)
Query: 4 HDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQ 63
H +N I G + +A+++ + K L T+S++L + + + G++
Sbjct: 64 HQVTDYNAKILHFCQLGDLENAMELICMCKK---SELETKTYSSVLQLCAGLKSFTDGKK 120
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
+H I G +G LV YA G + + +R FD + +KN+ ++N M++ + G
Sbjct: 121 VHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180
Query: 124 VEESRRLFRGMK--------------------DKDSISWTTMITGLMQNGLEREAIDLFR 163
+ES LF+ M D+D ISW +MI+G + NGL + +++
Sbjct: 181 FKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYK 240
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
+M G+ +D T SVL C L GK +H+ I++ + + + L+DMY KC
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG 300
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
+ A VF M +NVVSWT+M+ GY ++G S+ A+K+ M++ G++ D + S++
Sbjct: 301 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILH 360
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+CA SL+ G H + S + V NAL+ Y KCG++E ++ +F+ M V+D +S
Sbjct: 361 ACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIIS 420
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
W ++ LKPD T+ VL AC+ +E+G+ ++
Sbjct: 421 WNTMIG---------------------ELKPDSRTMACVLPACASLSALERGKEIHGYIL 459
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ G ++D+ + G L A+ + +P D + W +++ +HG
Sbjct: 460 RN-GYSSDRHVANALVDLYVKCGVLGLARLLFDMIP-SKDLVSWTVMIAGYGMHG 512
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/521 (42%), Positives = 339/521 (65%)
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+ ++F +++ + +W TMI G ++ A++L+R+M + + D T+ +L A
Sbjct: 93 AHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAK 152
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L+ + EG+++H+ IRN + VFV + LV MY C + A +F MA +N+V+W ++
Sbjct: 153 LMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSV 212
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ GY NG EA+ +F M G+EPD FT+ S++S+CA L +L G + H + GL
Sbjct: 213 INGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGL 272
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ NAL+ Y KCG+I +H++F+EM + VSWT+L+ G A G E ++LF++
Sbjct: 273 DGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKE 332
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
+ GL P E+T +GVL ACS G+V++G YF+ M +EYGI P +HY CM+D+L RAG
Sbjct: 333 LERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAG 392
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+++A FI MP P+A+ W TLL +C IHG++ +G+ A LL+L+P + YVLLS+
Sbjct: 393 LVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSN 452
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
+YAS+ +W V ++RRTM +GV+K PG S ++ ++R+H F D S P +++IY +L +
Sbjct: 453 LYASEQRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAE 512
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
+ + + EGYVP +S+VL D+E EK L++HSEK+AIAF L+ G+PIRVVKNLRV
Sbjct: 513 ITKLLKLEGYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRV 572
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C+DCH A K ISK+ REI+VRD RFH FK+G CSC D+W
Sbjct: 573 CADCHLAIKLISKVFDREIVVRDRSRFHHFKDGHCSCKDYW 613
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 175/347 (50%), Gaps = 38/347 (10%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL--GRQIH 65
+WN +I G+A + A+++Y M + + T + ++ + + +D+ G ++H
Sbjct: 107 TWNTMIRGYAESENPMPALELYRQM---HVSCIEPDTHTYPFLLKAIAKLMDVREGEKVH 163
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
++ GF S VFV + LV MYA G E
Sbjct: 164 SIAIRNGFESLVFVQNTLVHMYAACGH-------------------------------AE 192
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
+ +LF M +++ ++W ++I G NG EA+ LFREM L G+ D FT S+L+AC
Sbjct: 193 SAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACA 252
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
L AL G++ H ++++ N+ G+AL+D+Y KC SI+ A VF M K+VVSWT+
Sbjct: 253 ELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTS 312
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR-SLVT 304
++VG NG +EA+++F ++R G+ P + T V+ +C++ ++EG + R
Sbjct: 313 LIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEY 372
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
G++ I +V G+ G ++ +H M ++ + V W L+
Sbjct: 373 GIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGA 419
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 152/300 (50%), Gaps = 9/300 (3%)
Query: 194 KQIHAFIIRNDHK-DNVFVGSALV-DMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYG 251
+QIHAF IR+ N +G L+ + C + YA +F + N+ +W M+ GY
Sbjct: 57 RQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYA 116
Query: 252 QNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFIT 311
++ A++++ M + IEPD T ++ + A L + EG + H ++ G S +
Sbjct: 117 ESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVF 176
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG 371
V N LV Y CG+ E +H+LF M R+ V+W ++++GYA G+ NE + LF +M G
Sbjct: 177 VQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRG 236
Query: 372 LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEA 431
++PD T++ +LSAC+ G + GR MVK G+ ++D+ ++ G + +A
Sbjct: 237 VEPDGFTMVSLLSACAELGALALGRRAHVYMVK-VGLDGNLHAGNALLDLYAKCGSIRQA 295
Query: 432 KSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN--PASYVLLSSIYA 489
++M + W +L+ ++G GK A E EL+ P+ + +YA
Sbjct: 296 HKVFDEME-EKSVVSWTSLIVGLAVNG---FGKEALELFKELERKGLMPSEITFVGVLYA 351
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 17/219 (7%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRR--CVDLGRQI 64
V+WN +I+G+A +G N+A+ ++ M GL + F+ + ++S+ + LGR+
Sbjct: 207 VTWNSVINGYALNGRPNEALTLFREM---GLRGVEPDGFTMVSLLSACAELGALALGRRA 263
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +++K G + G+ L+D+YAK G I A + FDE+ EK++V + ++I GL G
Sbjct: 264 HVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFG 323
Query: 125 EESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQFTFGS 179
+E+ LF+ ++ K I++ ++ G+ E D F+ M+ E G+ +G
Sbjct: 324 KEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGC 383
Query: 180 VLTACG--GLLALEEGKQIHAFIIRNDHKDNVFVGSALV 216
++ G GL+ KQ H FI + N V L+
Sbjct: 384 MVDLLGRAGLV-----KQAHEFIQNMPMQPNAVVWRTLL 417
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/650 (36%), Positives = 379/650 (58%), Gaps = 38/650 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSWN L+SG + +DA+ + M G S + ++++S R +L
Sbjct: 309 MLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQ---KPDQVSVLNLIAASGRSGNL 365
Query: 61 --GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G+++H + ++ G S + +G+ LVDMYAK
Sbjct: 366 LKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCC-------------------------- 399
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
V+ F M +KD ISWTT+I G QN EAI+LFR+++++G+ +D G
Sbjct: 400 -----VKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIG 454
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
SVL AC GL + ++IH ++ + D D + + +A+V++Y + I YA F ++ K
Sbjct: 455 SVLRACSGLKSRNFIREIHGYVFKRDLAD-IMLQNAIVNVYGEVGHIDYARRAFESIRSK 513
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
++VSWT+M+ NG EA+++F ++++ I+PD + S +S+ ANL+SL++G + H
Sbjct: 514 DIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIH 573
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G + G ++++LV Y CG +E+S ++F+ + RD + WT++++ G N
Sbjct: 574 GFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGN 633
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
+ I LF+KM + PD +T + +L ACS +GL+ +G+ +FEIM Y + P +HY CM
Sbjct: 634 KAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACM 693
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
+D+LSR+ LEEA F+ MP P + W LL +C IH N E+G+ AA+ LL+ D N
Sbjct: 694 VDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQSDTENS 753
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
Y L+S+I+A+ G+W+ V ++R M+ G++K+PGCSWI+ +++H F A D S P +D
Sbjct: 754 GKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTD 813
Query: 539 QIYAELEKLNRKMIKE-GYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
IY +L + + + K+ GY+ V H+V EK +ML HSE+LA+ +GLL P G
Sbjct: 814 DIYLKLAQFTKLLEKKGGYIAQTKFVFHNVSEEEKTQMLYGHSERLALGYGLLVTPKGTC 873
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
IR+ KNLR+C DCH K S+++QR ++VRDA RFH F+ G CSCGDFW
Sbjct: 874 IRITKNLRICDDCHTFFKIASEVSQRPLVVRDANRFHHFERGLCSCGDFW 923
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 139/460 (30%), Positives = 235/460 (51%), Gaps = 39/460 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSWN +IS H + G+ +A+ ++ M + G+ + + TF L V L
Sbjct: 208 MEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVAS-NTYTFVAALQGVEDPSFVKL 266
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G IHG +LK + V+V + L+ MYAK G + DA
Sbjct: 267 GMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAG----------------------- 303
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
R+F M +D +SW T+++GL+QN L +A++ FR+M+ G DQ + ++
Sbjct: 304 --------RVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNL 355
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ A G L +GK++HA+ IRN N+ +G+ LVDMY KC +KY F M K++
Sbjct: 356 IAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDL 415
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SWT ++ GY QN EA+ +F +Q G++ D +GSV+ +C+ L S + HG
Sbjct: 416 ISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGY 475
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
L I + NA+V YG+ G+I+ + R F + +D VSWT++++ G E
Sbjct: 476 VFKRDLAD-IMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEA 534
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR--HYFEIMVKEYGIRPIHDHYTCM 418
++LF + ++PD + +I LSA + ++KG+ H F I + PI + +
Sbjct: 535 LELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPI---ASSL 591
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+D+ + G +E ++ + + D I W +++++ +HG
Sbjct: 592 VDMYACCGTVENSRKMFHSVK-QRDLILWTSMINANGMHG 630
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 138/513 (26%), Positives = 248/513 (48%), Gaps = 63/513 (12%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
SWN L+ S G +A+++Y M G+ + TF ++L + LG +IHG
Sbjct: 112 SWNALMGAFVSSGKYLEAIELYKDMRVLGVA-IDACTFPSVLKACGALGESRLGAEIHGV 170
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
+K G+G +VFV + L+ MY K G + A+ FD G++
Sbjct: 171 AVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFD---------------GIM-------- 207
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
M+ +D++SW ++I+ + G EA+ LFR M+ G+A + +TF + L
Sbjct: 208 ------MEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDP 261
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
++ G IH +++++H +V+V +AL+ MY KC ++ A VF +M ++ VSW +L
Sbjct: 262 SFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLL 321
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
G QN +A+ F +MQ +G +PD ++ ++I++ +L +G + H ++ GL
Sbjct: 322 SGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLD 381
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
S + + N LV Y KC ++ F M+ +D +SWT +++GYA+ E I+LF K+
Sbjct: 382 SNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKV 441
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY-----------T 416
G+ D + + VL ACS GL K R++ IR IH +
Sbjct: 442 QVKGMDVDPMMIGSVLRACS--GL--KSRNF---------IREIHGYVFKRDLADIMLQN 488
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY 476
++++ G ++ A+ + D + W ++++ C +H + + L+
Sbjct: 489 AIVNVYGEVGHIDYARRAFESIR-SKDIVSWTSMITCC-VHNGLPVEALELFYSLKQTNI 546
Query: 477 NPASYVLLSSIYAS-------KGKWDHVSQLRR 502
P S ++S++ A+ KGK H +R+
Sbjct: 547 QPDSIAIISALSATANLSSLKKGKEIHGFLIRK 579
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 197/394 (50%), Gaps = 42/394 (10%)
Query: 20 GSVNDAVKVYNLMLKDGLGNLSRI--TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYV 77
G++ A + L+ L SR+ S +L + + + + G+Q+H +LK +
Sbjct: 22 GTLKPAFQSLTLLSTHPLATPSRLEHAHSLLLDLCVAAKALPQGQQLHALLLKSHLSA-- 79
Query: 78 FVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDK 137
F+ + LV MY K G + DA + FDE+ E+ I
Sbjct: 80 FLATKLVLMYGKCGSLRDAVKVFDEMSERTI----------------------------- 110
Query: 138 DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIH 197
SW ++ + +G EAI+L+++MR+ G+A+D TF SVL ACG L G +IH
Sbjct: 111 --FSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIH 168
Query: 198 AFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR--TMAWKNVVSWTAMLVGYGQNGC 255
++ + + VFV +AL+ MY KC + A +F M ++ VSW +++ + G
Sbjct: 169 GVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGN 228
Query: 256 SEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNA 315
EA+ +F MQ G+ + +T + + + + ++ G HG L + + + V+NA
Sbjct: 229 CLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANA 288
Query: 316 LVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPD 375
L+ Y KCG +ED+ R+F M RD VSW L+SG + ++ ++ F M + G KPD
Sbjct: 289 LIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPD 348
Query: 376 EVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
+V+++ +++A R+G + KG+ V Y IR
Sbjct: 349 QVSVLNLIAASGRSGNLLKGKE-----VHAYAIR 377
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 138/275 (50%), Gaps = 6/275 (2%)
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L C AL +G+Q+HA ++++ + F+ + LV MY KC S++ A VF M+ +
Sbjct: 52 LLDLCVAAKALPQGQQLHALLLKSHL--SAFLATKLVLMYGKCGSLRDAVKVFDEMSERT 109
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+ SW A++ + +G EA++++ +M+ G+ D T SV+ +C L G + HG
Sbjct: 110 IFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHG 169
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN--EMNVRDEVSWTALVSGYAKFGKA 357
++ G F+ V NAL+ YGKCG++ + LF+ M D VSW +++S + G
Sbjct: 170 VAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNC 229
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
E + LF +M G+ + T + L V+ G ++K ++
Sbjct: 230 LEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYV-ANA 288
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+I + ++ GR+E+A M D + W TLLS
Sbjct: 289 LIAMYAKCGRMEDAGRVFESM-LCRDYVSWNTLLS 322
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/647 (36%), Positives = 381/647 (58%), Gaps = 34/647 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSWN +I G++ G +++K++ M+ +L +T +++L ++
Sbjct: 336 MVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDL--LTITSILQACGHLGDLEF 393
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +H +++ G+ + L++MYAK G N++
Sbjct: 394 GKYVHDYMITSGYECDTTASNILINMYAKCG---------------NLL----------- 427
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
S+ +F GMK KDS+SW +MI +QNG EA+ LF+ M+ + + D T+ +
Sbjct: 428 -----ASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTD-VKPDSVTYVML 481
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+ L L GK++H + + N+ V + LVDMY KC + + VF M +++
Sbjct: 482 LSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDI 541
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
++W ++ + +++ M+ G+ PD T+ S++ C+ LA+ +G + HG
Sbjct: 542 ITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGC 601
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
GL S + V N L+ Y KCG++ +S ++F M +D V+WTAL+S +G+ +
Sbjct: 602 IFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKA 661
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ F +M + G+ PD V + ++ ACS +GLVE+G +YF M K+Y I P +HY C++D
Sbjct: 662 VRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVD 721
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+LSR+ L++A+ FI MP PD+ W LLS+CR+ G+ EI + +E ++EL+P +
Sbjct: 722 LLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGY 781
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVL+S++YA+ GKWD V +R++++ +G++KDPGCSW++ +++V++F S +++
Sbjct: 782 YVLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEV 841
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
L L M KEGY+ ++ VLHD++ EK +L HSE+LAIAFGLL PG P++V
Sbjct: 842 NKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQV 901
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+KNLRVC DCH TKYISKI QRE+LVRDA RFH+FK+G CSCGD+W
Sbjct: 902 MKNLRVCEDCHTVTKYISKIXQRELLVRDANRFHVFKDGACSCGDYW 948
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 132/453 (29%), Positives = 228/453 (50%), Gaps = 36/453 (7%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P ++ WN +I +G ++A+ +Y+ + L TF +++ + ++
Sbjct: 135 PSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRL-QPDTYTFPSVINACAGLLDFEMA 193
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+ IH +L GFGS +++G+ L+DMY + F++L
Sbjct: 194 KSIHDRVLXMGFGSDLYIGNALIDMYCR----------FNDL------------------ 225
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
+++R++F M +D +SW ++I+G NG EA++++ R G+ D +T SVL
Sbjct: 226 ---DKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVL 282
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
ACGGL ++EEG IH I + K +V V + L+ MYCK + +F M ++ V
Sbjct: 283 RACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAV 342
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW M+ GY Q G EE++K+F M N +PD T+ S++ +C +L LE G H
Sbjct: 343 SWNTMICGYSQVGLYEESIKLFMEMV-NQFKPDLLTITSILQACGHLGDLEFGKYVHDYM 401
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ +G T SN L+ Y KCGN+ S +F+ M +D VSW ++++ Y + G +E +
Sbjct: 402 ITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAM 461
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
LF KM+ +KPD VT + +LS ++ G + G+ + K G ++D+
Sbjct: 462 KLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAK-MGFNSNIVVSNTLVDM 519
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
++ G + ++ M D I W T+++SC
Sbjct: 520 YAKCGEMGDSLKVFENMK-ARDIITWNTIIASC 551
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 146/491 (29%), Positives = 234/491 (47%), Gaps = 41/491 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN LISG+ ++G N+A+++Y G+ S T S++L V+
Sbjct: 235 MPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDS-YTMSSVLRACGGLGSVEE 293
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G IHG I K G V V + L+ MY K + D +R FD++ ++ V +NTMI G +
Sbjct: 294 GDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQ 353
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL EES +LF E ++ F+ D T S+
Sbjct: 354 VGLYEESIKLF------------------------MEMVNQFKP--------DLLTITSI 381
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L ACG L LE GK +H ++I + ++ + + L++MY KC ++ ++ VF M K+
Sbjct: 382 LQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDS 441
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW +M+ Y QNG +EA+K+F M + ++PD T ++S L L G + H
Sbjct: 442 VSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCD 500
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
G S I VSN LV Y KCG + DS ++F M RD ++W +++ N
Sbjct: 501 LAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLG 560
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ + +M + G+ PD T++ +L CS +G+ + K G+ +I+
Sbjct: 561 LRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFK-LGLESDVPVGNVLIE 619
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN--P 478
+ S+ G L + M D + W L+S+C ++G GK A + E++ P
Sbjct: 620 MYSKCGSLRNSFQVFKLMK-TKDVVTWTALISACGMYGE---GKKAVRAFGEMEAAGIVP 675
Query: 479 ASYVLLSSIYA 489
++ I+A
Sbjct: 676 DHVAFVAIIFA 686
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 178/403 (44%), Gaps = 42/403 (10%)
Query: 110 MYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLERE---AIDLF---- 162
M N I G +R + S R + +K+ + +G + RE + LF
Sbjct: 1 MANKTIGGCIRTPCPDASCRYYDWIKNLYELKSRVHSSGNYVDHQRREFYTSTKLFSRVM 60
Query: 163 REMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC 222
+ +R+ Q F S+ A + ++H+ II +V + L+ Y
Sbjct: 61 KTLRVLHECSRQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHF 120
Query: 223 KSIKYAESVFRTMA-WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
+ + SVFR + NV W +++ NG EA+ ++ QR ++PD +T SV
Sbjct: 121 RDPTSSFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSV 180
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE 341
I++CA L E H R L G S + + NAL+ Y + +++ + ++F EM +RD
Sbjct: 181 INACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDV 240
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEI 401
VSW +L+SGY G NE ++++ + + G+ PD T+ VL AC G VE+G
Sbjct: 241 VSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEG-DIIHG 299
Query: 402 MVKEYGI-----------------------RPIHDH--------YTCMIDILSRAGRLEE 430
++++ GI R I D + MI S+ G EE
Sbjct: 300 LIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEE 359
Query: 431 AKSFINKM--PFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL 471
+ +M F PD + ++L +C G++E GK+ + ++
Sbjct: 360 SIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMI 402
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 251/640 (39%), Positives = 372/640 (58%), Gaps = 33/640 (5%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRC-VDLGRQIHGH 67
+N+L+ G DA+ ++ ML + T + L S SR C +D+GR I +
Sbjct: 86 YNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACAL-KSCSRMCTLDVGRGIQAY 144
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
+K G + FV S L+ MYA + A+ FD + E +VM
Sbjct: 145 AVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVM----------------- 187
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
W +IT M+NG E +++F+ M G+A D+ T SV+TACG +
Sbjct: 188 --------------WNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRI 233
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
+ GK + ++ N + +AL+DMY KC + A +F M ++VV+W+AM+
Sbjct: 234 GDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMI 293
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
GY Q EA+ +F MQ +EP+D T+ SV+S+CA L +LE G H L
Sbjct: 294 SGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLS 353
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
I + ALV FY KCG I+D+ F M V++ +WTAL+ G A G+ E ++LF M
Sbjct: 354 LTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSM 413
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
++P +VT IGVL ACS + LVE+GR +F+ M ++YGI+P +HY C++D+L RAG
Sbjct: 414 RKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGL 473
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSI 487
++EA FI MP P+A+ W LLSSC +H NVEIG+ A + ++ L+P + Y+LLS+I
Sbjct: 474 IDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNI 533
Query: 488 YASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKL 547
YAS G+W + + +R+ M+++G+ K PGCS I+ V F A+D P +IY ++E++
Sbjct: 534 YASVGQWKNAAMIRKEMKDRGIEKTPGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEM 593
Query: 548 NRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVC 607
++ GY+P+ + V +V+ EK ++HHSEKLAIAFGL+ + PG IR+ KNLRVC
Sbjct: 594 IDRIKMAGYIPNTADVRLEVDEHEKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVC 653
Query: 608 SDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+DCH+ATK ISK+ REI+VRD RFH FK+G CSC D+W
Sbjct: 654 TDCHSATKLISKVYNREIVVRDRNRFHHFKDGTCSCNDYW 693
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 107/251 (42%), Gaps = 38/251 (15%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLM-LKDGLGNLSRITFSTMLIMSSSRRCVD 59
M D V+W+ +ISG+ +A+ +++ M L + N +T ++L + ++
Sbjct: 281 MQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPN--DVTMVSVLSACAVLGALE 338
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G+ +H +I + + +G+ LVD YAK G I DA F+ +P KN + +I G
Sbjct: 339 TGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKG-- 396
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ NG REA++LF MR + TF
Sbjct: 397 -----------------------------MATNGRGREALELFSSMRKASIEPTDVTFIG 427
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
VL AC +EEG++ H + D+ K +VD+ + I A RTM
Sbjct: 428 VLMACSHSCLVEEGRR-HFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPI 486
Query: 238 K-NVVSWTAML 247
+ N V W A+L
Sbjct: 487 EPNAVIWRALL 497
>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
Length = 770
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 248/662 (37%), Positives = 389/662 (58%), Gaps = 50/662 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+W L++G+ + ++V+ ML+ G S T L + VDL
Sbjct: 139 MPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYP-SHYTLGATLNACLASCDVDL 197
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+HG+ +K+G S +G+ L +YAKLG + A R F +PEKN+
Sbjct: 198 GKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNV------------ 245
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLERE-AIDLFREMRLEGLAMDQFTFGS 179
I+WTTMI+ ++ E + LF +M ++G+ ++FT S
Sbjct: 246 -------------------ITWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTS 286
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
V++ CG L L GKQ+ AF + + N+ V ++ + +Y + A +F M +
Sbjct: 287 VMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDAS 346
Query: 240 VVSWTAMLVGYGQNGCSE-----------EAVKIFCNMQRNGIEPDDFTLGSVISSCANL 288
+++W AM+ GY Q S +A+ IF +++R+ ++PD FT S++S C+ +
Sbjct: 347 IITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAM 406
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
+LE+G Q H +++ +G +S + V++ALV Y KCG I+D+++ F EM R V+WT+++
Sbjct: 407 MALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMI 466
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
SGY++ G+ E I LFE+M G++P+E+T + +LSACS AGLVE+ HYF++M KEY I
Sbjct: 467 SGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCI 526
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
P+ DHY CMID+ R GR+E+A SFI + F P+ W++L++ CR HGN+E+ +AA+
Sbjct: 527 EPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAAD 586
Query: 469 SLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREK--GVRKDPGCSWIKYKSRVHI 526
LLEL P +Y+LL ++Y S +W V+++R+ M+++ G+ +D SWI K +V+
Sbjct: 587 KLLELKPKGIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDR--SWITIKDKVYF 644
Query: 527 FSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKM--LNHHSEKLA 584
F A+D + P + ++Y LE L K GY P ++ L D E EK L HHSE+LA
Sbjct: 645 FRANDRTHPQATELYQLLENLLEKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLA 704
Query: 585 IAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCG 644
+A GLL PPG +RV KN+ +C DCH++ K S + REI+VRD+ R H FK+G CSCG
Sbjct: 705 VALGLLQTPPGATVRVTKNITMCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCG 764
Query: 645 DF 646
DF
Sbjct: 765 DF 766
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 198/423 (46%), Gaps = 50/423 (11%)
Query: 56 RCVDLG-----RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVM 110
RCV++G R +HGH+ K G G+ +FV + LV+ Y + G DA
Sbjct: 87 RCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDA-------------- 132
Query: 111 YNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL 170
RRLF GM +++ ++WT ++TG N +++F EM G
Sbjct: 133 -----------------RRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGR 175
Query: 171 AMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAES 230
+T G+ L AC ++ GKQ+H + I+ + +G++L +Y K S+ A
Sbjct: 176 YPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALR 235
Query: 231 VFRTMAWKNVVSWTAMLVGYGQN-GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
F + KNV++WT M+ ++ C E + +F +M +G+ P++FTL SV+S C
Sbjct: 236 AFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRL 295
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
L G Q S G + + V N+ + Y + G +++ RLF +M ++W A++S
Sbjct: 296 DLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMIS 355
Query: 350 GYAKF-----------GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
GYA+ + + + +F + +KPD T +LS CS +E+G
Sbjct: 356 GYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQI 415
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+K + + + + ++++ ++ G +++A +MP + W +++S HG
Sbjct: 416 HAQTIKSGFLSDVVVN-SALVNMYNKCGCIQDANKAFLEMP-TRTFVTWTSMISGYSQHG 473
Query: 459 NVE 461
+
Sbjct: 474 QPQ 476
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 119/223 (53%), Gaps = 1/223 (0%)
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M EG A+ + +L C + +L + +H + + ++FV ++LV+ Y +C +
Sbjct: 69 MLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGA 128
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A +F M +NVV+WTA++ GY N +++F M G P +TLG+ +++
Sbjct: 129 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNA 188
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
C ++ G Q HG ++ G S ++ N+L + Y K G+++ + R F + ++ ++W
Sbjct: 189 CLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITW 248
Query: 345 TALVSGYAKFGKANET-IDLFEKMLSHGLKPDEVTLIGVLSAC 386
T ++S A+ + E + LF ML G+ P+E TL V+S C
Sbjct: 249 TTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLC 291
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 86/174 (49%), Gaps = 2/174 (1%)
Query: 281 VISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD 340
++ C + SL HG TG + + V+ +LV Y +CG D+ RLF+ M R+
Sbjct: 84 LLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPERN 143
Query: 341 EVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
V+WTALV+GY + +++F +ML G P TL L+AC + V+ G+
Sbjct: 144 VVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHG 203
Query: 401 IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
+K YG I + + ++ G L+ A ++P + I W T++S+C
Sbjct: 204 YAIK-YGAESITSMGNSLCSLYAKLGSLDSALRAFWRIP-EKNVITWTTMISAC 255
>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
Length = 770
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 248/662 (37%), Positives = 389/662 (58%), Gaps = 50/662 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+W L++G+ + ++V+ ML+ G S T L + VDL
Sbjct: 139 MPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYP-SHYTLGATLNACLASCDVDL 197
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+HG+ +K+G S +G+ L +YAKLG + A R F +PEKN+
Sbjct: 198 GKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNV------------ 245
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLERE-AIDLFREMRLEGLAMDQFTFGS 179
I+WTTMI+ ++ E + LF +M ++G+ ++FT S
Sbjct: 246 -------------------ITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTS 286
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
V++ CG L L GKQ+ AF + + N+ V ++ + +Y + A +F M +
Sbjct: 287 VMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDAS 346
Query: 240 VVSWTAMLVGYGQNGCSE-----------EAVKIFCNMQRNGIEPDDFTLGSVISSCANL 288
+++W AM+ GY Q S +A+ IF +++R+ ++PD FT S++S C+ +
Sbjct: 347 IITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAM 406
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
+LE+G Q H +++ +G +S + V++ALV Y KCG I+D+++ F EM R V+WT+++
Sbjct: 407 MALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMI 466
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
SGY++ G+ E I LFE+M G++P+E+T + +LSACS AGLVE+ HYF++M KEY I
Sbjct: 467 SGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCI 526
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
P+ DHY CMID+ R GR+E+A SFI + F P+ W++L++ CR HGN+E+ +AA+
Sbjct: 527 EPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAAD 586
Query: 469 SLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREK--GVRKDPGCSWIKYKSRVHI 526
LLEL P +Y+LL ++Y S +W V+++R+ M+++ G+ +D SWI K +V+
Sbjct: 587 KLLELKPKGIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDR--SWITIKDKVYF 644
Query: 527 FSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKM--LNHHSEKLA 584
F A+D + P + ++Y LE L K GY P ++ L D E EK L HHSE+LA
Sbjct: 645 FRANDRTHPQATELYQLLENLLEKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLA 704
Query: 585 IAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCG 644
+A GLL PPG +RV KN+ +C DCH++ K S + REI+VRD+ R H FK+G CSCG
Sbjct: 705 VALGLLQTPPGATVRVTKNITMCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCG 764
Query: 645 DF 646
DF
Sbjct: 765 DF 766
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 195/423 (46%), Gaps = 50/423 (11%)
Query: 56 RCVDLG-----RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVM 110
RCV+ G R +HGH+ K G + +FV + LV+ Y + DA
Sbjct: 87 RCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDA-------------- 132
Query: 111 YNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL 170
RRLF GM +++ ++WT ++TG N +++F EM G
Sbjct: 133 -----------------RRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGR 175
Query: 171 AMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAES 230
+T G+ L AC ++ GKQ+H + I+ + +G++L +Y K S+ A
Sbjct: 176 YPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALR 235
Query: 231 VFRTMAWKNVVSWTAMLVGYGQN-GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
F + KNV++WT M+ ++ C E + +F +M +G+ P++FTL SV+S C
Sbjct: 236 AFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRL 295
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
L G Q S G + + V N+ + Y + G +++ RLF +M ++W A++S
Sbjct: 296 DLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMIS 355
Query: 350 GYAKF-----------GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
GYA+ + + + +F + +KPD T +LS CS +E+G
Sbjct: 356 GYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQI 415
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+K + + + + ++++ ++ G +++A +MP + W +++S HG
Sbjct: 416 HAQTIKSGFLSDVVVN-SALVNMYNKCGCIQDANKAFLEMP-TRTFVTWTSMISGYSQHG 473
Query: 459 NVE 461
+
Sbjct: 474 QPQ 476
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 118/223 (52%), Gaps = 1/223 (0%)
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M EG A+ + +L C +L + +H + + ++FV ++LV+ Y +C +
Sbjct: 69 MLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSA 128
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A +F M +NVV+WTA++ GY N +++F M G P +TLG+ +++
Sbjct: 129 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNA 188
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
C ++ G Q HG ++ G S ++ N+L + Y K G+++ + R F + ++ ++W
Sbjct: 189 CLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITW 248
Query: 345 TALVSGYAKFGKANET-IDLFEKMLSHGLKPDEVTLIGVLSAC 386
T ++S A+ + E + LF ML G+ P+E TL V+S C
Sbjct: 249 TTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLC 291
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 2/174 (1%)
Query: 281 VISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD 340
++ C SL HG TG + + V+ +LV Y +C D+ RLF+ M R+
Sbjct: 84 LLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMPERN 143
Query: 341 EVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
V+WTALV+GY + +++F +ML G P TL L+AC + V+ G+
Sbjct: 144 VVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHG 203
Query: 401 IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
+K YG I + + ++ G L+ A ++P + I W T++S+C
Sbjct: 204 YAIK-YGAESITSMGNSLCSLYAKLGSLDSALRAFWRIP-EKNVITWTTMISAC 255
>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
Length = 730
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 247/660 (37%), Positives = 386/660 (58%), Gaps = 46/660 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+W L++G+ + ++V+ ML+ G S T L + VDL
Sbjct: 99 MPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYP-SHYTLGATLNACLASCDVDL 157
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+HG+ +K+G S +G+ L +YAKLG + A R F +PEKN+
Sbjct: 158 GKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNV------------ 205
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLERE-AIDLFREMRLEGLAMDQFTFGS 179
I+WTTMI+ ++ E + LF +M ++G+ ++FT S
Sbjct: 206 -------------------ITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTS 246
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
V++ CG L L GKQ+ AF + + N+ V ++ + +Y + A +F M +
Sbjct: 247 VMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDAS 306
Query: 240 VVSWTAMLVGYGQNGCSE-----------EAVKIFCNMQRNGIEPDDFTLGSVISSCANL 288
+++W AM+ GY Q S +A+ IF +++R+ ++PD FT S++S C+ +
Sbjct: 307 IITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAM 366
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
+LE+G Q H +++ +G +S + V++ALV Y KCG I+D+++ F EM R V+WT+++
Sbjct: 367 MALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMI 426
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
SGY++ G+ E I LFE+M G++P+E+T + +LSACS AGLVE+ HYF++M KEY I
Sbjct: 427 SGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCI 486
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
P+ DHY CMID+ R GR+E+A SFI + F P+ W++L++ CR HGN+E+ +AA+
Sbjct: 487 EPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAAD 546
Query: 469 SLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFS 528
LLEL P +Y+LL ++Y S +W V+++R+ M+++ V SWI K +V+ F
Sbjct: 547 KLLELKPKGIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFR 606
Query: 529 ADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKM--LNHHSEKLAIA 586
A+D + P + ++Y LE L K GY P ++ L D E EK L HHSE+LA+A
Sbjct: 607 ANDRTHPQATELYQLLENLLEKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVA 666
Query: 587 FGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDF 646
GLL PPG +RV KN+ +C DCH++ K S + REI+VRD+ R H FK+G CSCGDF
Sbjct: 667 LGLLQTPPGATVRVTKNITMCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 726
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 244/644 (37%), Positives = 373/644 (57%), Gaps = 54/644 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +SWN +ISG+ S+G + +Y M+ G+ ++ T ++L+ ++ + LG+ +
Sbjct: 215 DVISWNSMISGYVSNGLTERGLGIYKQMMYLGI-DVDLATIISVLVGCANSGTLSLGKAV 273
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +K F + + L+DMY+K G +
Sbjct: 274 HSLAIKSSFERRINFSNTLLDMYSKCGDL------------------------------- 302
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ + R+F M +++ +SWT+MI G ++G AI L ++M EG+ +D S+L AC
Sbjct: 303 DGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHAC 362
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+L+ GK +H +I N+ + N+FV +AL+DMY KC S++ A SVF TM K+++SW
Sbjct: 363 ARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWN 422
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
M+ ++PD T+ V+ +CA+L++LE G + HG L
Sbjct: 423 TMI---------------------GELKPDSRTMACVLPACASLSALERGKEIHGYILRN 461
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G S V+NALV Y KCG + + LF+ + +D VSWT +++GY G NE I F
Sbjct: 462 GYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATF 521
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+M G++PDEV+ I +L ACS +GL+E+G +F IM ++ I P +HY CM+D+LSR
Sbjct: 522 NEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSR 581
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
G L +A F+ +P PDA W LL CR + ++E+ + AE + EL+P N YVLL
Sbjct: 582 TGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLL 641
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF-SADDWSSPYSDQIYAE 543
++IYA KW+ V +LR + ++G+RK+PGCSWI+ K +V++F S ++ S P+S I +
Sbjct: 642 ANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESL 701
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
L+K+ RKM +EG+ P L + + +K L HSEKLA+AFGLL +PP IRV KN
Sbjct: 702 LKKMRRKMKEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKN 761
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LRVC DCH K++SK T+REI++RD+ RFH FK+G CSC FW
Sbjct: 762 LRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/475 (26%), Positives = 226/475 (47%), Gaps = 46/475 (9%)
Query: 4 HDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQ 63
H +N I G + +A+++ + K L T+ ++L + + + G++
Sbjct: 64 HQVTDYNAKILHFCQLGDLENAMELICMCQKS---ELETKTYGSVLQLCAGLKSFTDGKK 120
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
+H I G +G LV YA G + + +R FD + +KN+ ++N M++ + G
Sbjct: 121 VHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180
Query: 124 VEESRRLFRGMK--------------------DKDSISWTTMITGLMQNGLEREAIDLFR 163
+ES LF+ M D+D ISW +MI+G + NGL + +++
Sbjct: 181 FKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYK 240
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
+M G+ +D T SVL C L GK +H+ I++ + + + L+DMY KC
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG 300
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
+ A VF M +NVVSWT+M+ GY ++G S+ A+K+ M++ G++ D + S++
Sbjct: 301 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILH 360
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+CA SL+ G H + S + V NAL+ Y KCG++E ++ +F+ M V+D +S
Sbjct: 361 ACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIIS 420
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
W ++ LKPD T+ VL AC+ +E+G+ ++
Sbjct: 421 WNTMIG---------------------ELKPDSRTMACVLPACASLSALERGKEIHGYIL 459
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ G ++D+ + G L A+ + +P D + W +++ +HG
Sbjct: 460 RN-GYSSDRHVANALVDLYVKCGVLGLARLLFDMIP-SKDLVSWTVMIAGYGMHG 512
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 252/647 (38%), Positives = 382/647 (59%), Gaps = 37/647 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+WN +I+G + +AVK + M + L S T + L +S + +G Q+
Sbjct: 454 DSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYP-SNFTMISALSSCASLGWISVGEQL 512
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H LK G V V + L+ +Y + G V
Sbjct: 513 HCEGLKLGLDLDVSVSNALLALYGECGY-------------------------------V 541
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLER-EAIDLFREMRLEGLAMDQFTFGSVLTA 183
+E ++ F M D D +SW ++I L + EA++ F M G ++ TF ++L A
Sbjct: 542 KECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAA 601
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA-WKNVVS 242
L E GKQIHA +++ + + + +AL+ Y KC + Y E++F M+ ++ VS
Sbjct: 602 VSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVS 661
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL 302
W +M+ GY N +A+ + M + G D FT +V+S+CA +A+LE G + HG S+
Sbjct: 662 WNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSV 721
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
L S I + +ALV Y KCG I+ + R F M R+ SW +++SGYA+ G +++D
Sbjct: 722 RACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLD 781
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL 422
LF +M G PD VT +GVLSACS AGLV +G +F+ M + YG+ P +H++CM+D+L
Sbjct: 782 LFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLL 841
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSS-CRIHG-NVEIGKWAAESLLELDPYNPAS 480
R G L + + F+N+MP P+ + W T+L + CR +G N +G+ AAE LLE++P N +
Sbjct: 842 GRVGELNKMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVN 901
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
Y+LLS++YAS GKWD V++ R MR+ V+K+ GCSW+ K VH+F A D S P D I
Sbjct: 902 YILLSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLI 961
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y +L++LN KM GY+P+ L+D+E K ++L++HSEK+A+AF +L P +PIR+
Sbjct: 962 YEKLKELNGKMRLAGYIPETRFALYDLEGESKEELLSYHSEKIAVAF-VLTRPSKMPIRI 1020
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+KNLRVC DCH+A KYIS+I +R+I++RD+ RFH F+NG+CSCGDFW
Sbjct: 1021 LKNLRVCGDCHSAFKYISQIVERQIVLRDSNRFHHFENGKCSCGDFW 1067
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 131/457 (28%), Positives = 225/457 (49%), Gaps = 44/457 (9%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGN---LSRITFSTMLIMSSS--RRCVDLG 61
VS N +IS + G A +++ M K+ +G+ + TF +++ + S + L
Sbjct: 244 VSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLL 303
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
Q+ + K GF ++VGS LV +AK G I AK
Sbjct: 304 EQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKN----------------------- 340
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
+F+ M ++ +S +I GL++ EA++LF EM+ + + ++ ++ +L
Sbjct: 341 --------IFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMK-DSVELNPNSYMIIL 391
Query: 182 TACGGLLALEEGK----QIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIKYAESVFRTMA 236
TA LE GK ++HAF+IR+ + + +G+ L++MY KC +I A VFR M
Sbjct: 392 TAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMD 451
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
K+ V+W +M+ G QN EAVK F M+R + P +FT+ S +SSCA+L + G Q
Sbjct: 452 NKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQ 511
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H L GL ++VSNAL+ YG+CG +++ + F+ M D VSW +L+ A
Sbjct: 512 LHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEP 571
Query: 357 AN-ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
+ E ++ F M+ G P+ VT I +L+A S L E G+ +++K +
Sbjct: 572 SMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKR-NVAADTAIE 630
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
++ + G + ++ ++M D + W +++S
Sbjct: 631 NALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMIS 667
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 214/416 (51%), Gaps = 57/416 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRC--- 57
MP + VSW+ LISG+ + N+A +++ M+ DG + F + ++ + + C
Sbjct: 134 MPLRNLVSWSCLISGYTRNRMPNEACELFRKMVSDGFMP-NHYAFGS--VIRACQECGEY 190
Query: 58 -VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAK-LGLIYDAKRGFDELPEKNIVMYNTMI 115
+ G QIHG + K + + V + L+ MY LG++ A+R FD + +N+V N+MI
Sbjct: 191 GLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMI 250
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE----GLA 171
+ +RG D++S A D+F M+ E GL
Sbjct: 251 SVYCQRG---------------DAVS----------------AFDIFSTMQKEVMGDGLK 279
Query: 172 MDQFTFGSVLTAC-----GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIK 226
+++TFGS+++A GL+ LE Q+ + ++ +++VGSALV + K SI
Sbjct: 280 PNEYTFGSLISATCSLANSGLVLLE---QLLTRVEKSGFLHDLYVGSALVSGFAKAGSIG 336
Query: 227 YAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCA 286
YA+++F+ M+++NVVS +++G + EEAV++F M ++ +E + + ++++
Sbjct: 337 YAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEM-KDSVELNPNSYMIILTAFP 395
Query: 287 NLASLE----EGTQFHGRSLVTGLISF-ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE 341
LE +G++ H + +GL++ I + N L+ Y KCG I D+ +F M+ +D
Sbjct: 396 EFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDS 455
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH 397
V+W ++++G + + E + F++M L P T+I LS+C+ G + G
Sbjct: 456 VTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQ 511
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 176/346 (50%), Gaps = 43/346 (12%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
++H + K GF + +F+ + L+++YA++G + ++ FDE+P +N+V ++ +I+G R
Sbjct: 92 AEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTR 151
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
N + EA +LFR+M +G + + FGSV
Sbjct: 152 -------------------------------NRMPNEACELFRKMVSDGFMPNHYAFGSV 180
Query: 181 LTACG--GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS-IKYAESVFRTMAW 237
+ AC G L+ G QIH + + + ++V + L+ MY + YA F ++
Sbjct: 181 IRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWP 240
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR----NGIEPDDFTLGSVISSCANLAS--L 291
+N+VS +M+ Y Q G + A IF MQ+ +G++P+++T GS+IS+ +LA+ L
Sbjct: 241 RNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGL 300
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
Q R +G + + V +ALV+ + K G+I + +F +M+ R+ VS L+ G
Sbjct: 301 VLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGL 360
Query: 352 AKFGKANETIDLFEKML-SHGLKPDEVTLIGVLSACSRAGLVEKGR 396
+ + E ++LF +M S L P+ +I L+A ++E G+
Sbjct: 361 VRQKRGEEAVELFMEMKDSVELNPNSYMII--LTAFPEFHVLENGK 404
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 140/271 (51%), Gaps = 22/271 (8%)
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
+CG ++ +++H + +N +++F+ + L+++Y + + VF M +N+VS
Sbjct: 86 SCGS----KDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVS 141
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS--LEEGTQFHGR 300
W+ ++ GY +N EA ++F M +G P+ + GSVI +C L+ G Q HG
Sbjct: 142 WSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGL 201
Query: 301 SLVTGLISFITVSNALVTFYGKC-GNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
T ++ +T SN L++ YG G ++ + R F+ + R+ VS +++S Y + G A
Sbjct: 202 MSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVS 261
Query: 360 TIDLFEKM----LSHGLKPDEVTLIGVLSA-CSRAGLVEKGRHYFEIM---VKEYGIRPI 411
D+F M + GLKP+E T ++SA CS L G E + V++ G +
Sbjct: 262 AFDIFSTMQKEVMGDGLKPNEYTFGSLISATCS---LANSGLVLLEQLLTRVEKSGF--L 316
Query: 412 HDHY--TCMIDILSRAGRLEEAKSFINKMPF 440
HD Y + ++ ++AG + AK+ KM +
Sbjct: 317 HDLYVGSALVSGFAKAGSIGYAKNIFQKMSY 347
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 249/649 (38%), Positives = 370/649 (57%), Gaps = 38/649 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SWN +ISG+ G+ +A L L +GL + +T ++L + +
Sbjct: 211 MPVRDMGSWNAMISGYCQSGNAKEA-----LTLSNGLRAMDSVTVVSLLSACTEAGDFNR 265
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G IH + +K G S +FV + L+D+YA+ G + D ++ FD
Sbjct: 266 GVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDR------------------ 307
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
M +D ISW ++I N AI LF+EMRL + D T S+
Sbjct: 308 -------------MYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISL 354
Query: 181 LTACGGLLALEEGKQIHAFIIRND-HKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+ L + + + F +R +++ +G+A+V MY K + A +VF + +
Sbjct: 355 ASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTD 414
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQFH 298
V+SW ++ GY QNG + EA++++ M+ G I + T SV+ +C+ +L +G + H
Sbjct: 415 VISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLH 474
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
GR L GL + V +L YGKCG +ED+ LF ++ + V W L++ + G
Sbjct: 475 GRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGE 534
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
+ + LF++ML G+KPD +T + +LSACS +GLV++G+ FE+M +YGI P HY CM
Sbjct: 535 KAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCM 594
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
+D+ RAG+LE A FI M PDA W LLS+CR+HGNV++GK A+E L E++P +
Sbjct: 595 VDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHV 654
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
+VLLS++YAS GKW+ V ++R KG+RK PG S ++ ++V +F + + P +
Sbjct: 655 GYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYE 714
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
++Y EL L K+ GYVPD VL DVE EK +L HSE+LAIAF L+ P I
Sbjct: 715 EMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTI 774
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R+ KNLRVC DCH+ TK+ISKIT+REI+VRD+ RFH FKNG CSCGD+W
Sbjct: 775 RIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 175/349 (50%), Gaps = 11/349 (3%)
Query: 106 KNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM 165
+N+ + ++ G V +R F ++++D +W MI+G + G E I F
Sbjct: 84 QNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF 143
Query: 166 RL-EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
L GL D TF SVL AC ++ +G +IH ++ +V+V ++L+ +Y + K+
Sbjct: 144 MLSSGLTPDYRTFPSVLKACRTVI---DGNKIHCLALKFGFMWDVYVAASLIHLYSRYKA 200
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEP-DDFTLGSVIS 283
+ A +F M +++ SW AM+ GY Q+G ++EA+ + NG+ D T+ S++S
Sbjct: 201 VGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLS 255
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+C G H S+ GL S + VSN L+ Y + G + D ++F+ M VRD +S
Sbjct: 256 ACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLIS 315
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
W +++ Y + I LF++M ++PD +TLI + S S+ G + R +
Sbjct: 316 WNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTL 375
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
++ ++ + ++ G ++ A++ N +P D I W T++S
Sbjct: 376 RKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP-NTDVISWNTIIS 423
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 141/266 (53%), Gaps = 12/266 (4%)
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
L+ K +HA ++ + NV + + LV++YC ++ A F + ++V +W M+ G
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 250 YGQNGCSEEAVKIFC-NMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
YG+ G S E ++ F M +G+ PD T SV+ +C + +G + H +L G +
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVI---DGNKIHCLALKFGFMW 183
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
+ V+ +L+ Y + + ++ LF+EM VRD SW A++SGY + G A E + L
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL-----TL 238
Query: 369 SHGLKP-DEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
S+GL+ D VT++ +LSAC+ AG +G +K +G+ +ID+ + GR
Sbjct: 239 SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIK-HGLESELFVSNKLIDLYAEFGR 297
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSS 453
L + + ++M + D I W +++ +
Sbjct: 298 LRDCQKVFDRM-YVRDLISWNSIIKA 322
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 98/223 (43%), Gaps = 16/223 (7%)
Query: 268 RNGIEPDDFT-LGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
+NG E + + ++ C NL S H R +V+ I + +S LV Y GN+
Sbjct: 46 KNGNESKEIDDVHTLFRYCTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNV 102
Query: 327 EDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK-MLSHGLKPDEVTLIGVLSA 385
+ F+ + RD +W ++SGY + G ++E I F MLS GL PD T VL A
Sbjct: 103 ALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKA 162
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC--MIDILSRAGRLEEAKSFINKMPFPPD 443
C V G + +K +G + D Y +I + SR + A+ ++MP D
Sbjct: 163 CRT---VIDGNKIHCLALK-FGF--MWDVYVAASLIHLYSRYKAVGNARILFDEMPV-RD 215
Query: 444 AIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
W ++S GN + + L +D S LLS+
Sbjct: 216 MGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVS--LLSA 256
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/646 (37%), Positives = 379/646 (58%), Gaps = 38/646 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL--GR 62
D ++WN +I+G +G N+A++ + L+D NL S + I+++S R L G+
Sbjct: 177 DNITWNSMIAGFTQNGLYNEALQFF-CGLQDA--NLKPDEVSLISILAASGRLGYLLNGK 233
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
+IH + +K S + +G+ L+DMY+K + A FD+
Sbjct: 234 EIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDK-------------------- 273
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
M +KD ISWTT+I QN EA+ L R+++ +G+ +D GS L
Sbjct: 274 -----------MINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLL 322
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
AC GL L K++H + ++ D + + + ++D+Y C +I YA +F ++ K+VVS
Sbjct: 323 ACSGLRCLSHAKEVHGYTLKRGLSD-LMMQNMIIDVYADCGNINYATRMFESIKCKDVVS 381
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL 302
WT+M+ Y NG + EA+ +F M+ +EPD TL S++S+ A+L++L +G + HG
Sbjct: 382 WTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIF 441
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
G + + N+LV Y CG++E+++++F + V WT +++ Y G+ ++
Sbjct: 442 RKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVE 501
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL 422
LF M L PD +T + +L ACS +GL+ +G+ E M +Y + P +HY C++D+L
Sbjct: 502 LFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLL 561
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYV 482
RA LEEA F+ M P A W L +CRIH N ++G+ AA+ LL+LDP +P SYV
Sbjct: 562 GRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYV 621
Query: 483 LLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYA 542
L+S+++A+ G+W V ++R M+ G++K+PGCSWI+ ++VH F D S P S +IY
Sbjct: 622 LISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQ 681
Query: 543 ELEKLNRKMIKE-GYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVV 601
+L ++ K+ KE GYVP VLH+V EK++ML HSE+LAIA+GL+ G PIR+
Sbjct: 682 KLAQITEKLEKEGGYVPQTKLVLHNVGKEEKVQMLYGHSERLAIAYGLMSTSEGTPIRIT 741
Query: 602 KNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCH K +SK +RE++VRDA RFH F++G CSCGDFW
Sbjct: 742 KNLRVCVDCHTFCKLVSKFFERELIVRDASRFHHFEDGVCSCGDFW 787
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 157/514 (30%), Positives = 258/514 (50%), Gaps = 54/514 (10%)
Query: 4 HDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD---- 59
+D VSWN +IS ++ +G +A+ ++ M K G+G +T ++++ + C D
Sbjct: 75 NDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGA------NTYTLVAALQACEDSSFK 128
Query: 60 -LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
LG +IH ILK V+V + LV M+ + G + A R FDEL EK+ + +N+MI G
Sbjct: 129 KLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGF 188
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+ GL E+ + F G++D + L D+ +
Sbjct: 189 TQNGLYNEALQFFCGLQDAN-------------------------------LKPDEVSLI 217
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
S+L A G L L GK+IHA+ ++N N+ +G+ L+DMY KC + YA VF M K
Sbjct: 218 SILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINK 277
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+++SWT ++ Y QN C EA+K+ +Q G++ D +GS + +C+ L L + H
Sbjct: 278 DLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVH 337
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G +L GL S + + N ++ Y CGNI + R+F + +D VSWT+++S Y G AN
Sbjct: 338 GYTLKRGL-SDLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLAN 396
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
E + +F M ++PD +TL+ +LSA + + KG+ + ++ G +
Sbjct: 397 EALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRK-GFMLEGSTVNSL 455
Query: 419 IDILSRAGRLEEA-KSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE--SLLELDP 475
+D+ + G LE A K FI + W T++++ +HG GK A E S++E
Sbjct: 456 VDMYACCGSLENAYKVFI--CTRSKSLVLWTTMINAYGMHGR---GKAAVELFSIMEDQK 510
Query: 476 YNPASYVLLSSIYAS--KGKWDHVSQLRRTMREK 507
P L+ +YA G + +L TM+ K
Sbjct: 511 LIPDHITFLALLYACSHSGLINEGKRLLETMKCK 544
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 211/444 (47%), Gaps = 38/444 (8%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
TF +L + G +IHG I+K G+ S VFV + LV MYAK I A++ FD +
Sbjct: 12 TFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFDRM 71
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
E+N D +SW ++I+ NG EA+ LFR
Sbjct: 72 NERN------------------------------DVVSWNSIISAYSLNGQCMEALGLFR 101
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
EM+ G+ + +T + L AC + G +IHA I++++ +V+V +ALV M+ +
Sbjct: 102 EMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFG 161
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
+ YA +F + K+ ++W +M+ G+ QNG EA++ FC +Q ++PD+ +L S+++
Sbjct: 162 KMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILA 221
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+ L L G + H ++ L S + + N L+ Y KC + + +F++M +D +S
Sbjct: 222 ASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLIS 281
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
WT +++ YA+ E + L K+ + G+ D + + L ACS + + +
Sbjct: 282 WTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTL 341
Query: 404 KEYGIRPIHD--HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
K R + D +ID+ + G + A + D + W +++ SC +H +
Sbjct: 342 K----RGLSDLMMQNMIIDVYADCGNINYATRMFESIK-CKDVVSWTSMI-SCYVHNGLA 395
Query: 462 IGKWAAESLLELDPYNPASYVLLS 485
L++ P S L+S
Sbjct: 396 NEALGVFYLMKETSVEPDSITLVS 419
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 158/290 (54%), Gaps = 3/290 (1%)
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
MR+ G+ D FTF VL ACG + + G +IH II+ + VFV ++LV MY KC
Sbjct: 1 MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60
Query: 225 IKYAESVFRTMAWKN-VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
I A +F M +N VVSW +++ Y NG EA+ +F MQ+ G+ + +TL + +
Sbjct: 61 ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+C + + + G + H L + + + V+NALV + + G + + R+F+E++ +D ++
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNIT 180
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
W ++++G+ + G NE + F + LKPDEV+LI +L+A R G + G+ +
Sbjct: 181 WNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAM 240
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
K + + T +ID+ S+ + A +KM D I W T++++
Sbjct: 241 KNWLDSNLRIGNT-LIDMYSKCCCVAYAGLVFDKM-INKDLISWTTVIAA 288
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 246/644 (38%), Positives = 373/644 (57%), Gaps = 54/644 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +SWN +ISG+ S+G + +Y M+ G+ ++ T ++L+ ++ + LG+ +
Sbjct: 215 DVISWNSMISGYVSNGLTERGLGIYKQMMYLGI-DVDLATIISVLVGCANSGTLSLGKAV 273
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +K F + + L+DMY+K G +
Sbjct: 274 HSLAIKSSFERRINFSNTLLDMYSKCGDL------------------------------- 302
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ + R+F M +++ +SWT+MI G ++G AI L ++M EG+ +D S+L AC
Sbjct: 303 DGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHAC 362
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+L+ GK +H +I N+ N+FV +AL+DMY KC S++ A SVF TM K+++SW
Sbjct: 363 ARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWN 422
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
M+ ++PD T+ ++ +CA+L++LE G + HG L
Sbjct: 423 TMV---------------------GELKPDSRTMACILPACASLSALERGKEIHGYILRN 461
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G S V+NALV Y KCG + + LF+ + +D VSWT +++GY G NE I F
Sbjct: 462 GYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATF 521
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+M G++PDEV+ I +L ACS +GL+E+G +F IM ++ I P +HY CM+D+LSR
Sbjct: 522 NEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSR 581
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
G L +A FI +P PDA W LL CRI+ ++E+ + AE + EL+P N YVLL
Sbjct: 582 TGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLL 641
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF-SADDWSSPYSDQIYAE 543
++IYA K + V ++R + +KG+RK+PGCSWI+ K RV++F S ++ S P+S +I +
Sbjct: 642 ANIYAEAEKREEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESL 701
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
L+K+ RKM +EGY P L + + +K L HSEKLA+AFGLL +PP IRV KN
Sbjct: 702 LKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKN 761
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LRVC DCH K++SK T+REI++RD+ RFH FK+G CSC FW
Sbjct: 762 LRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 226/475 (47%), Gaps = 46/475 (9%)
Query: 4 HDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQ 63
H +N I G + +A+++ + K L T+ ++L + + + + G++
Sbjct: 64 HQVTDYNAKILHFCQLGDLENAMELVCMCQKS---ELETKTYGSVLQLCAGLKSLTDGKK 120
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
+H I G +G LV YA G + + +R FD + +KN+ ++N M++ + G
Sbjct: 121 VHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180
Query: 124 VEESRRLFRGMK--------------------DKDSISWTTMITGLMQNGLEREAIDLFR 163
+ES LF+ M D+D ISW +MI+G + NGL + +++
Sbjct: 181 FKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYK 240
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
+M G+ +D T SVL C L GK +H+ I++ + + + L+DMY KC
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG 300
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
+ A VF M +NVVSWT+M+ GY ++G S+ A+ + M++ G++ D + S++
Sbjct: 301 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILH 360
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+CA SL+ G H + S + V NAL+ Y KCG++E ++ +F+ M V+D +S
Sbjct: 361 ACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIIS 420
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
W +V LKPD T+ +L AC+ +E+G+ ++
Sbjct: 421 WNTMVG---------------------ELKPDSRTMACILPACASLSALERGKEIHGYIL 459
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ G ++D+ + G L A+ + +P D + W +++ +HG
Sbjct: 460 RN-GYSSDRHVANALVDLYVKCGVLGLARLLFDMIP-SKDLVSWTVMIAGYGMHG 512
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 251/648 (38%), Positives = 367/648 (56%), Gaps = 34/648 (5%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P + VSW LISG A +G + A+ + M ++G+ + TF +S R G
Sbjct: 19 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVP-NDFTFPCAFKAVASLRLPVTG 77
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+QIH +K G VFVG DMY K L DA++ FDE+PE+N+
Sbjct: 78 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLE------------ 125
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
+W I+ + +G REAI+ F E R + TF + L
Sbjct: 126 -------------------TWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFL 166
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
AC L L G Q+H ++R+ +V V + L+D Y KCK I+ +E +F M KN V
Sbjct: 167 NACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAV 226
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW +++ Y QN E+A ++ +++ +E DF + SV+S+CA +A LE G H +
Sbjct: 227 SWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHA 286
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ + I V +ALV YGKCG IEDS + F+EM ++ V+ +L+ GYA G+ + +
Sbjct: 287 VKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMAL 346
Query: 362 DLFEKMLSHGL--KPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
LFE+M G P+ +T + +LSACSRAG VE G F+ M YGI P +HY+C++
Sbjct: 347 ALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIV 406
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L RAG +E A FI KMP P W L ++CR+HG ++G AAE+L +LDP +
Sbjct: 407 DMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSG 466
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
++VLLS+ +A+ G+W + +R ++ G++K G SWI K++VH F A D S + +
Sbjct: 467 NHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKE 526
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
I L KL +M GY PD+ L+D+E EK ++HHSEKLA+AFGLL +P +PIR
Sbjct: 527 IQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIR 586
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ KNLR+C DCH+ K++S +REI+VRD RFH FK+G CSC D+W
Sbjct: 587 ITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 634
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 161/315 (51%), Gaps = 1/315 (0%)
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
E +R + R ++ +SWT++I+GL QNG A+ F EMR EG+ + FTF A
Sbjct: 9 ESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAV 68
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L GKQIHA ++ +VFVG + DMYCK + A +F + +N+ +W
Sbjct: 69 ASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWN 128
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
A + +G EA++ F +R P+ T + +++C++ L G Q HG L +
Sbjct: 129 AFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRS 188
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G + ++V N L+ FYGKC I S +F EM ++ VSW +LV+ Y + + + L+
Sbjct: 189 GFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLY 248
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+ ++ + + VLSAC+ +E GR VK R I + ++D+ +
Sbjct: 249 LRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVG-SALVDMYGK 307
Query: 425 AGRLEEAKSFINKMP 439
G +E+++ ++MP
Sbjct: 308 CGCIEDSEQAFDEMP 322
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 82/170 (48%)
Query: 218 MYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFT 277
MY K + A V R +NVVSWT+++ G QNG A+ F M+R G+ P+DFT
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60
Query: 278 LGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN 337
+ A+L G Q H ++ G I + V + Y K +D+ +LF+E+
Sbjct: 61 FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120
Query: 338 VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS 387
R+ +W A +S G+ E I+ F + P+ +T L+ACS
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACS 170
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/603 (38%), Positives = 356/603 (59%), Gaps = 32/603 (5%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
+ T + + + ++ R++H H+ F F+ + L+ +Y K G +
Sbjct: 54 YHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVL---------- 103
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
E+R++F M+ KD +SWT++I G QN + EAI L
Sbjct: 104 ---------------------EARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPG 142
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M + FTF S+L A G G+QIHA ++ D ++V+VGSAL+DMY +C
Sbjct: 143 MLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGM 202
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A +VF + KN VSW A++ G+ + G E A+ F M RNG E FT SV SS
Sbjct: 203 MDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSS 262
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
A L +LE+G H + + N L+ Y K G++ D+ ++F+ ++ +D V+W
Sbjct: 263 IARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTW 322
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
+++ +A++G E + FE+M G+ ++VT + +L+ACS GLV++G+ YFE+M K
Sbjct: 323 NTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFEMM-K 381
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
EY + P DH+ ++ +L RAG L A FI KMP P A W LL++CR+H N ++G+
Sbjct: 382 EYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIEPTAAVWGALLAACRMHKNAKVGQ 441
Query: 465 WAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRV 524
+AA+ + ELDP + VLL +IYAS G+WD +++RR M+ GV+K+P CSW++ ++ V
Sbjct: 442 FAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRRIMKTTGVKKEPACSWVEMENSV 501
Query: 525 HIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLA 584
H+F A+D + P +++IY ++++K+ KEGYVPDM VL V+ E+ L +HSEKLA
Sbjct: 502 HMFVANDDTHPRAEEIYKMWGQISKKIRKEGYVPDMDYVLLRVDDQEREANLQYHSEKLA 561
Query: 585 IAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCG 644
+AF L+ +P G IR++KN+R+C DCH+A KYISK+ REI+VRD RFH F NG CSC
Sbjct: 562 LAFALIEMPAGATIRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNRFHHFSNGSCSCA 621
Query: 645 DFW 647
D+W
Sbjct: 622 DYW 624
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 160/304 (52%), Gaps = 5/304 (1%)
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
LA + + +TAC LE+ +++HA + + + F+ ++L+ +YCKC S+ A
Sbjct: 47 LAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEAR 106
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
VF M K++VSWT+++ GY QN EEA+ + M + +P+ FT S++ + A
Sbjct: 107 KVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHA 166
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
G Q H ++ + V +AL+ Y +CG ++ + +F++++ ++ VSW AL+S
Sbjct: 167 DSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALIS 226
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
G+A+ G + F +ML +G + T V S+ +R G +E+G+ M+K
Sbjct: 227 GFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKM 286
Query: 410 PIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAES 469
T ++D+ +++G + +A+ +++ D + W T+L++ +G +GK A
Sbjct: 287 TAFAGNT-LLDMYAKSGSMIDARKVFDRVD-DKDLVTWNTMLTAFAQYG---LGKEAVSH 341
Query: 470 LLEL 473
E+
Sbjct: 342 FEEM 345
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 151/293 (51%), Gaps = 32/293 (10%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW LI+G+A + +A+ + MLK G + TF+++L + + +GRQI
Sbjct: 116 DMVSWTSLIAGYAQNDMPEEAIGLLPGMLK-GRFKPNGFTFASLLKAAGAHADSGIGRQI 174
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +K + V+VGS L+DMYA+ G++ A FD+L KN V +N +I+G R+G
Sbjct: 175 HALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDG 234
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
E T LM F EM G FT+ SV ++
Sbjct: 235 E---------------------TALMT----------FAEMLRNGFEATHFTYSSVFSSI 263
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L ALE+GK +HA +I++ K F G+ L+DMY K S+ A VF + K++V+W
Sbjct: 264 ARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWN 323
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
ML + Q G +EAV F M+++GI + T ++++C++ ++EG ++
Sbjct: 324 TMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRY 376
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 251/642 (39%), Positives = 382/642 (59%), Gaps = 49/642 (7%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRC-VDLGRQIH 65
++ N LI+ + G ++ AV+V+ + + S +T++++L + + + RQ+
Sbjct: 42 IASNKLIASYVRCGDIDSAVRVF-----EDMKVKSTVTWNSILAAFAKKPGHFEYARQLF 96
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
I + SY + L + LG ++DA+ FD +P K++ +NTMI+ L + GL+
Sbjct: 97 EKIPQPNTVSYNIM---LACHWHHLG-VHDARGFFDSMPLKDVASWNTMISALAQVGLMG 152
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
E+RRLF M +K+ +SW+ M++G + ACG
Sbjct: 153 EARRLFSAMPEKNCVSWSAMVSGYV--------------------------------ACG 180
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
L A E +A +R+ V +A++ Y K ++ AE +F+ M+ + +V+W A
Sbjct: 181 DLDAAVEC--FYAAPMRS-----VITWTAMITGYMKFGRVELAERLFQEMSMRTLVTWNA 233
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
M+ GY +NG +E+ +++F M G++P+ +L SV+ C+NL++L+ G Q H
Sbjct: 234 MIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCP 293
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
L S T +LV+ Y KCG+++D+ LF ++ +D V W A++SGYA+ G + + LF+
Sbjct: 294 LSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFD 353
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
+M GLKPD +T + VL AC+ AGLV+ G YF M +++GI +HY CM+D+L RA
Sbjct: 354 EMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRA 413
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
G+L EA I MPF P + TLL +CRIH N+ + ++AA++LLELDP YV L+
Sbjct: 414 GKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELDPTIATGYVQLA 473
Query: 486 SIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELE 545
++YA++ +WDHV+ +RR+M++ V K PG SWI+ S VH F + D P I+ +L+
Sbjct: 474 NVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLHPELASIHEKLK 533
Query: 546 KLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
L +KM GYVPD+ VLHDV K ++L HSEKLAIAFGLL +P G+PIRV KNLR
Sbjct: 534 DLEKKMKLAGYVPDLEFVLHDVGEELKEQLLLWHSEKLAIAFGLLKVPLGVPIRVFKNLR 593
Query: 606 VCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VC DCH+ATKYIS I REI+VRD RFH FK+G CSC D+W
Sbjct: 594 VCGDCHSATKYISTIEGREIIVRDTTRFHHFKDGFCSCRDYW 635
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 159/298 (53%), Gaps = 11/298 (3%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLM-LKDGLGNLSRITFSTMLIMSSSRRCVD 59
+P + VS+N++++ H H V+DA ++ M LKD +++TM+ + +
Sbjct: 99 IPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKD------VASWNTMISALAQVGLMG 152
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
R++ + + S+ S +V Y G + A F P ++++ + MITG +
Sbjct: 153 EARRLFSAMPEKNCVSW----SAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYM 208
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ G VE + RLF+ M + ++W MI G ++NG + + LFR M G+ + + S
Sbjct: 209 KFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTS 268
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL C L AL+ GKQ+H + + + G++LV MY KC +K A +F + K+
Sbjct: 269 VLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKD 328
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
VV W AM+ GY Q+G ++A+++F M++ G++PD T +V+ +C + ++ G Q+
Sbjct: 329 VVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQY 386
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 136/312 (43%), Gaps = 63/312 (20%)
Query: 205 HKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQN-GCSEEAVKIF 263
+ +NV + L+ Y +C I A VF M K+ V+W ++L + + G E A ++F
Sbjct: 37 NNNNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLF 96
Query: 264 ----------------CNMQRNGIE-----------PDDFTLGSVISSCANLASLEEGTQ 296
C+ G+ D + ++IS+ A + + E +
Sbjct: 97 EKIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEARR 156
Query: 297 FHG----------RSLVTGLISF-----------------ITVSNALVTFYGKCGNIEDS 329
++V+G ++ + A++T Y K G +E +
Sbjct: 157 LFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVELA 216
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
RLF EM++R V+W A+++GY + G+A + + LF ML G+KP+ ++L VL CS
Sbjct: 217 ERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNL 276
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTC---MIDILSRAGRLEEAKSFINKMPFPPDAIG 446
++ G+ +++ K P+ T ++ + S+ G L++A ++P D +
Sbjct: 277 SALQLGKQVHQLVCK----CPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIP-RKDVVC 331
Query: 447 WATLLSSCRIHG 458
W ++S HG
Sbjct: 332 WNAMISGYAQHG 343
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D V WN +ISG+A HG+ A+++++ M K+GL ITF +L+ + VDL
Sbjct: 324 IPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGL-KPDWITFVAVLLACNHAGLVDL 382
Query: 61 GRQIHGHILK-FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEK-NIVMYNTMI 115
G Q + + FG + + +VD+ + G + +A +P K + +Y T++
Sbjct: 383 GVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLL 439
>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 242/607 (39%), Positives = 370/607 (60%), Gaps = 30/607 (4%)
Query: 41 SRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF 100
++ TFS++L S++ V G+Q+H I K GF + +FVG+ LVDMYAK ++ A R F
Sbjct: 9 NQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVF 68
Query: 101 DELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAID 160
D++PE+N+V +N+MI G L + + +F+ D
Sbjct: 69 DQMPERNLVSWNSMIVGFFHNNLYDRAVGVFK---------------------------D 101
Query: 161 LFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYC 220
+ RE + + ++ + SVL+AC + L G+Q+H +++ +V ++L+DMY
Sbjct: 102 VLRE---KTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYF 158
Query: 221 KCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGS 280
KC+ +F+ + ++VV+W +++G+ QN EEA F M+R GI PD+ + +
Sbjct: 159 KCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFST 218
Query: 281 VISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD 340
V+ S A+LA+L +GT H + + G + + + +L+T Y KCG++ D++++F + +
Sbjct: 219 VLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHN 278
Query: 341 EVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
+SWTA++S Y G AN+ I+LFE MLS G++P VT + VLSACS G VE+G +F
Sbjct: 279 VISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFN 338
Query: 401 IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
M K + + P +HY CM+D+L RAG L+EAK FI MP P W LL +CR +GN+
Sbjct: 339 SMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNL 398
Query: 461 EIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKY 520
++G+ AAE L E++PYNP +YVLL+++ G+ + +++RR M GVRK+PGCSWI
Sbjct: 399 KMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDV 458
Query: 521 KSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHS 580
K+ +F+A D S SD+IY LEKL + + K+GYV + V + +E +E+ + L +HS
Sbjct: 459 KNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHS 518
Query: 581 EKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGE 640
EKLA+AFGLL +P PIR+ KNLR C CH K SKI REI+VRD RFH F +G
Sbjct: 519 EKLALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGF 578
Query: 641 CSCGDFW 647
CSCGD+W
Sbjct: 579 CSCGDYW 585
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 159/299 (53%), Gaps = 11/299 (3%)
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
MR G +QFTF S+L+A + + G+Q+H+ I ++ N+FVG+ALVDMY KC
Sbjct: 1 MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR-NGIEPDDFTLGSVIS 283
+ A VF M +N+VSW +M+VG+ N + AV +F ++ R + P++ ++ SV+S
Sbjct: 61 MHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLS 120
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+CAN+ L G Q HG + GL+ V N+L+ Y KC ++ +LF + RD V+
Sbjct: 121 ACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVT 180
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
W LV G+ + K E + F M G+ PDE + VL + + + +G + ++
Sbjct: 181 WNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQII 240
Query: 404 KEYGIRPIHDHYTC----MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
K ++ + C +I + ++ G L +A + + I W ++S+ ++HG
Sbjct: 241 KLGYVKNM-----CILGSLITMYAKCGSLVDAYQVFEGIE-DHNVISWTAMISAYQLHG 293
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 192/405 (47%), Gaps = 36/405 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSWN +I G + + AV V+ +L++ + ++ S++L ++ ++
Sbjct: 71 MPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNF 130
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+HG ++KFG +V + L+DMY K + + F + ++++V +N ++ G +
Sbjct: 131 GRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFV- 189
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
QN EA + F MR EG+ D+ +F +V
Sbjct: 190 ------------------------------QNDKFEEACNYFWVMRREGILPDEASFSTV 219
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L + L AL +G IH II+ + N+ + +L+ MY KC S+ A VF + NV
Sbjct: 220 LHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNV 279
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQFHG 299
+SWTAM+ Y +GC+ + +++F +M GIEP T V+S+C++ +EEG F+
Sbjct: 280 ISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNS 339
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKAN 358
+ + +V G+ G ++++ R M ++ S W AL+ K+G
Sbjct: 340 MKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLK 399
Query: 359 ETIDLFEKMLS-HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
+ E++ P L+ + C+R+G +E+ +M
Sbjct: 400 MGREAAERLFEMEPYNPGNYVLLA--NMCTRSGRLEEANEVRRLM 442
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 251/639 (39%), Positives = 359/639 (56%), Gaps = 32/639 (5%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
+N +I G S N+AV +Y M K + S TFS +L + LG IH +
Sbjct: 72 YNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDS-FTFSFVLKACARLNLFHLGVMIHSLV 130
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
K GF VFV + +V Y+K G + DA + FD++ KN+V
Sbjct: 131 FKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVV------------------- 171
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
SWT MI G ++ G REA+DLFR + GL D F VL AC L
Sbjct: 172 ------------SWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLG 219
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
LE G+ I + NVFV ++LVDMY KC S++ A VF M K++V W+AM+
Sbjct: 220 DLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQ 279
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
GY NG EA+++F M++ + PD + + +SSCA+L +LE G G +S
Sbjct: 280 GYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLS 339
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
+ +L+ FY KCG++E++ ++ M +D V + A++SG A +G+ +F +M
Sbjct: 340 NPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMG 399
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
G+ P+E T +G+L C+ AGLV+ GRHYF M ++ + P +HY CM+D+L+RAG L
Sbjct: 400 KFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFL 459
Query: 429 EEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIY 488
+EA + I MP + I W +LL CR+H ++ + + L+EL+P+N YVLLS+IY
Sbjct: 460 DEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIY 519
Query: 489 ASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLN 548
++ +WD ++R T+ EKG++K PG SW++ VH F D S P S +IY +LE L
Sbjct: 520 SASRRWDEAEKIRSTVNEKGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLF 579
Query: 549 RKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCS 608
+ + + GY P VL DVE EK L HSEKLA+AF L+ IRVVKNLRVC
Sbjct: 580 KDLKEAGYNPTTEFVLFDVEEEEKEHFLGCHSEKLAVAFALISTGAKYVIRVVKNLRVCG 639
Query: 609 DCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
DCH A K+ISK+T REI++RD RFH F +G CSC D+W
Sbjct: 640 DCHEAIKHISKVTGREIVIRDNNRFHCFSDGACSCRDYW 678
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 168/326 (51%), Gaps = 4/326 (1%)
Query: 136 DKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQ 195
+ ++ + TMI G++ A+ L+ M + D FTF VL AC L G
Sbjct: 66 NSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVM 125
Query: 196 IHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGC 255
IH+ + + +VFV + +V Y KC ++ A VF M KNVVSWT M+ G + G
Sbjct: 126 IHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGK 185
Query: 256 SEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNA 315
EAV +F + +G+ PD F + V+ +CA L LE G GL + V+ +
Sbjct: 186 FREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATS 245
Query: 316 LVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPD 375
LV Y KCG++E++ +F+ M +D V W+A++ GYA G E I+LF +M ++PD
Sbjct: 246 LVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPD 305
Query: 376 EVTLIGVLSACSRAGLVEKGRHYFEIM-VKEYGIRPIHDHYTCMIDILSRAGRLEEAKSF 434
++G LS+C+ G +E G +M +E+ P+ T +ID ++ G +EEA
Sbjct: 306 CYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLG--TSLIDFYAKCGSMEEALG- 362
Query: 435 INKMPFPPDAIGWATLLSSCRIHGNV 460
+ KM D + + ++S ++G V
Sbjct: 363 VYKMMKEKDRVVFNAVISGLAMYGQV 388
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 160/360 (44%), Gaps = 40/360 (11%)
Query: 186 GLLALEEGKQIHAFIIR-NDHKDNVFVGSALVDMYCKCKSIKYAESVF-RTMAWKNVVSW 243
GL L+ K H ++R N H DN + L + +Y VF +T N +
Sbjct: 13 GLKCLKHAKLAHCRLLRLNLHHDNDLLSIILRSTINFSNNAQYPILVFHKTPTNSNTFLY 72
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
M+ G AV ++ +M + I PD FT V+ +CA L G H
Sbjct: 73 NTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFK 132
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
TG + V +V FY KCG + D+ ++F++M V++ VSWT ++ G +FGK E +DL
Sbjct: 133 TGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDL 192
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F +L GL+PD ++ VL AC+R G +E GR + + ++E G+ T ++D+ +
Sbjct: 193 FRGLLESGLRPDGFVIVRVLRACARLGDLESGR-WIDRCMRECGLSRNVFVATSLVDMYT 251
Query: 424 RAGRLEEAKSFIN----------------------------------KMPFPPDAIGWAT 449
+ G +EEA+ + K+ PD
Sbjct: 252 KCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVG 311
Query: 450 LLSSCRIHGNVEIGKWAAESLLELDPY--NPASYVLLSSIYASKGKWDHVSQLRRTMREK 507
LSSC G +E+G W A+ L+ + + NP L YA G + + + M+EK
Sbjct: 312 ALSSCASLGALELGNW-AKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEK 370
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 9/167 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSS--SRRCVDLGR 62
D V W+ +I G+AS+G +A++++ M K N+ ++ + +SS S ++LG
Sbjct: 270 DIVCWSAMIQGYASNGLPREAIELFFEMRKV---NVRPDCYAMVGALSSCASLGALELGN 326
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
G + F S +G+ L+D YAK G + +A + + EK+ V++N +I+GL G
Sbjct: 327 WAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYG 386
Query: 123 LVEESRRLFRGMKD----KDSISWTTMITGLMQNGLEREAIDLFREM 165
V + +F M + ++ ++ G GL + F M
Sbjct: 387 QVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSM 433
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/605 (38%), Positives = 363/605 (60%), Gaps = 33/605 (5%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
+ +L +R + G+++H H++K + ++ + L+ Y K + DA++ DE+P
Sbjct: 54 YDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 113
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
E K+ +SWT MI+ Q G EA+ +F E
Sbjct: 114 E-------------------------------KNVVSWTAMISRYSQTGHSSEALSVFAE 142
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M ++FTF +VLT+C L GKQIH I++ ++ ++FVGS+L+DMY K
Sbjct: 143 MMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQ 202
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
I+ A +F + ++VVS TA++ GY Q G EEA+++F +Q G+ P+ T S++++
Sbjct: 203 IEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTA 262
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
+ LA L+ G Q H L L + + N+L+ Y KCGN+ + RLF+ M R +SW
Sbjct: 263 LSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISW 322
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
A++ GY+K G E ++LF M +KPD VTL+ VLS CS + + G ++ MV
Sbjct: 323 NAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMV 382
Query: 404 K-EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
EYGI+P +HY C++D+L RAGR++EA FI +MP P A +LL +CR+H +V+I
Sbjct: 383 AGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDI 442
Query: 463 GKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKS 522
G++ L+E++P N +YV+LS++YAS G+W+ V+ +R M +K V K+PG SWI+++
Sbjct: 443 GEYVGHRLIEIEPENAGNYVILSNLYASAGRWEDVNNVRAMMMQKAVTKEPGRSWIQHEQ 502
Query: 523 RVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEK 582
+H F A+D + P +++ A++++++ KM + GYVPD+S VL+DV+ +K KML HSEK
Sbjct: 503 TLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDISCVLYDVDEEQKEKMLLGHSEK 562
Query: 583 LAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECS 642
LA+ FGL+ G+PIRV KNLR+C DCHN K SK+ +RE+ +RD RFH G CS
Sbjct: 563 LALTFGLITTGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVKGICS 622
Query: 643 CGDFW 647
CGD+W
Sbjct: 623 CGDYW 627
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 217/435 (49%), Gaps = 69/435 (15%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW +IS ++ G ++A+ V+ M++ G + TF+T+L + L
Sbjct: 112 MPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSD-GKPNEFTFATVLTSCIRASGLAL 170
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIHG I+K+ + S++FVGS L+DMYAK G I +A+ F+ LPE+++V +I G +
Sbjct: 171 GKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQ 230
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL E EA+++F+ ++ EG+ + T+ S+
Sbjct: 231 LGLDE-------------------------------EALEMFQRLQSEGMRPNYVTYASL 259
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LTA GL L+ GKQ H ++R + + ++L+DMY KC ++ YA+ +F M +
Sbjct: 260 LTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTA 319
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQ-RNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+SW AMLVGY ++G E +++F M+ ++PD TL +V+S C+ HG
Sbjct: 320 ISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCS-----------HG 368
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ TGL ++ + +V G+ G D+ + +V + G+ +E
Sbjct: 369 KMEDTGL----SIYDGMVA--GEYGIKPDTEH------------YGCIVDMLGRAGRIDE 410
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH-DHYTCM 418
+ ++M S KP L +L AC V+ G + +++ I P + +Y +
Sbjct: 411 AFEFIKRMPS---KPTAGVLGSLLGACRVHLSVDIGEYVGHRLIE---IEPENAGNYVIL 464
Query: 419 IDILSRAGRLEEAKS 433
++ + AGR E+ +
Sbjct: 465 SNLYASAGRWEDVNN 479
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 171/314 (54%), Gaps = 7/314 (2%)
Query: 146 ITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH 205
I+ L NG +EA+ EM + G + + ++L AC AL EG+++HA +I+ +
Sbjct: 26 ISQLCSNGRLQEAL---LEMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRY 82
Query: 206 KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCN 265
++ + L+ Y KC ++ A V M KNVVSWTAM+ Y Q G S EA+ +F
Sbjct: 83 LPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAE 142
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M R+ +P++FT +V++SC + L G Q HG + S I V ++L+ Y K G
Sbjct: 143 MMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQ 202
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
IE++ +F + RD VS TA+++GYA+ G E +++F+++ S G++P+ VT +L+A
Sbjct: 203 IEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTA 262
Query: 386 CSRAGLVEKGRH-YFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDA 444
S L++ G+ + ++ +E + + +ID+ S+ G L A+ + MP A
Sbjct: 263 LSGLALLDHGKQAHCHVLRRELPFYAVLQN--SLIDMYSKCGNLSYAQRLFDNMP-ERTA 319
Query: 445 IGWATLLSSCRIHG 458
I W +L HG
Sbjct: 320 ISWNAMLVGYSKHG 333
>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
Length = 785
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/654 (37%), Positives = 384/654 (58%), Gaps = 45/654 (6%)
Query: 4 HDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQ 63
HD VSWN L+SG+ G+ + +KV++LM GLG S F+ I+ D+GR
Sbjct: 167 HDDVSWNSLLSGYVRAGAREETLKVFSLMCHHGLGWNS---FALGSIIKCCASGSDVGRH 223
Query: 64 I----HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
I HG ++K G + +F+ S ++DMYAK
Sbjct: 224 IAEAVHGCVVKAGLDADLFLASAMIDMYAK------------------------------ 253
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNG------LEREAIDLFREMRLEGLAMD 173
RG + + LF+ + D + I + MI G ++ + REA+ L+ EM+ G+
Sbjct: 254 -RGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPS 312
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
+FTF S+L AC GKQIH ++++ D+ ++GSAL+D+Y ++ FR
Sbjct: 313 EFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFR 372
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE 293
++ +++V+WT+M+ G QN E+A+++F G++PD FT+ SV+++CA+LA
Sbjct: 373 SLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVART 432
Query: 294 GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK 353
G Q ++ G F + N+ + + G+++ R F EM RD VSW+A++S +A+
Sbjct: 433 GEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQ 492
Query: 354 FGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
G A + + +F +M++ + P+EVT + VL+ACS GLV+ G Y+EIM EYG+ P
Sbjct: 493 HGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGLSPTIK 552
Query: 414 HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL 473
H TC++D+L RAGRL +A++FI F DA+ W +LL+SCRIHG++E G+ A+ +++L
Sbjct: 553 HVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADQIMDL 612
Query: 474 DPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWS 533
+P + ASYV+L ++Y G+ S+ R M+E+GV+K+PG SWI+ +S VH F A D S
Sbjct: 613 EPTSSASYVILYNMYLDAGELSLASKTRDLMKERGVKKEPGLSWIELRSGVHSFVAGDKS 672
Query: 534 SPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIP 593
P S+ IY +L ++ K+ K + S+ + SE+ ++ HSEK+A+AFG++ +P
Sbjct: 673 HPESNAIYKKLAEMLSKIEKLANTDNASTGSDGISSSEQ-NLVGCHSEKIAVAFGMIHLP 731
Query: 594 PGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
PIRV+KNLRVC DCH+ K IS REI++RD +RFH F+ G CSCGD+W
Sbjct: 732 QSAPIRVMKNLRVCRDCHSTMKLISGSENREIILRDGIRFHHFRGGSCSCGDYW 785
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 222/468 (47%), Gaps = 45/468 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VS+NLLIS ++ G A++ + + R T++ L S R +DL
Sbjct: 62 MPRRNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACS--RALDL 119
Query: 61 --GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G+ +H + G G+ VF+ + L MYA G + +A+R FD E + V +N++++G
Sbjct: 120 RTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGY 179
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+R G EE+ + +F M GL + F G
Sbjct: 180 VRAGAREET-------------------------------LKVFSLMCHHGLGWNSFALG 208
Query: 179 SVLTAC--GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
S++ C G + + +H +++ ++F+ SA++DMY K ++ A ++F+++
Sbjct: 209 SIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVP 268
Query: 237 WKNVVSWTAMLVGYGQNGC------SEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS 290
NV+ + AM+ G+ ++ S EA+ ++ MQ G++P +FT S++ +C
Sbjct: 269 DPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGE 328
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
G Q HG+ L + +AL+ Y G +ED +R F + +D V+WT+++SG
Sbjct: 329 FGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISG 388
Query: 351 YAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP 410
+ + + LF++ + +GLKPD T+ V++AC+ + G + + +YG
Sbjct: 389 CVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQ-IQCLAIKYGFNR 447
Query: 411 IHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
I + +R+G ++ +M D + W+ ++SS HG
Sbjct: 448 FTAMGNSFIHMCARSGDVDAVTRRFQEME-SRDVVSWSAVISSHAQHG 494
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 183/365 (50%), Gaps = 19/365 (5%)
Query: 104 PEKNIVMYNTMITGLLRRGLVE--ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDL 161
P ++ + N+++ R G+ + RL M ++++S+ +I+ + GL A++
Sbjct: 30 PTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMPRRNAVSYNLLISSYSRAGLPGRALET 89
Query: 162 FREMRLE-GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYC 220
F R GL +D+FT+ + L AC L L GK +HA + + + VF+ ++L MY
Sbjct: 90 FARARAAAGLRVDRFTYAAALAACSRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYA 149
Query: 221 KCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGS 280
C + A VF + VSW ++L GY + G EE +K+F M +G+ + F LGS
Sbjct: 150 SCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFALGS 209
Query: 281 VISSCANLASLEE--GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
+I CA+ + + HG + GL + + +++A++ Y K G + ++ LF +
Sbjct: 210 IIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPD 269
Query: 339 RDEVSWTALVSGY----AKFGK--ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLV 392
+ + + A+++G+ A GK + E + L+ +M S G++P E T +L AC+ AG
Sbjct: 270 PNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEF 329
Query: 393 EKGRHYFEIMVKEYGIRPIHDH---YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
G+ ++K HD + +ID+ S +G +E+ +P D + W +
Sbjct: 330 GFGKQIHGQVLKH----SFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLP-KQDIVTWTS 384
Query: 450 LLSSC 454
++S C
Sbjct: 385 MISGC 389
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 188/435 (43%), Gaps = 37/435 (8%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK--CKSIKYAESVFRTMAWKNVVSWTAM 246
AL +HA I R ++F+ ++L+ YC+ + +A + M +N VS+ +
Sbjct: 14 ALPHVAAVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMPRRNAVSYNLL 73
Query: 247 LVGYGQNGCSEEAVKIF-CNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
+ Y + G A++ F G+ D FT + +++C+ L G H +++ G
Sbjct: 74 ISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRTGKAVHAMTVLDG 133
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
L + + +SN+L + Y CG + ++ R+F+ D+VSW +L+SGY + G ET+ +F
Sbjct: 134 LGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGAREETLKVFS 193
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM---VKEYGIRPIHDHYTCMIDIL 422
M HGL + L ++ C+ V GRH E + V + G+ + MID+
Sbjct: 194 LMCHHGLGWNSFALGSIIKCCASGSDV--GRHIAEAVHGCVVKAGLDADLFLASAMIDMY 251
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV--EIGKWAAESLLELDP--YNP 478
++ G L A + +P P + A + CR V E+ + A E+ P
Sbjct: 252 AKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQP 311
Query: 479 ASYVLLSSIYASK-------GKWDHVSQLRRTMREK--------GVRKDPGCSWIKYKSR 523
+ + S + A GK H L+ + + + D GC Y+
Sbjct: 312 SEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCF 371
Query: 524 VHIFSAD--DWSSPYSDQIYAELEKLNRKMIKE----GYVPD---MSSVLHDVELSEKIK 574
+ D W+S S + EL + ++ +E G PD MSSV++ S +
Sbjct: 372 RSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACA-SLAVA 430
Query: 575 MLNHHSEKLAIAFGL 589
+ LAI +G
Sbjct: 431 RTGEQIQCLAIKYGF 445
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 116/253 (45%), Gaps = 40/253 (15%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D V+W +ISG + A++++ + GL T S+++ +S
Sbjct: 374 LPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGL-KPDLFTMSSVMNACASLAVART 432
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G QI +K+GF + +G+ + M A+ G + R F E+ +++V ++ +I
Sbjct: 433 GEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVI----- 487
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ Q+G R+A+ +F EM +A ++ TF +V
Sbjct: 488 --------------------------SSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNV 521
Query: 181 LTAC--GGLLALEEGKQIHAFIIRNDHKDNVFVG--SALVDMYCKCKSIKYAESVFRTMA 236
LTAC GGL +++G + + I++N++ + + + +VD+ + + AE+ R A
Sbjct: 522 LTACSHGGL--VDDGLRYYE-IMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSA 578
Query: 237 W-KNVVSWTAMLV 248
+ + V W ++L
Sbjct: 579 FHDDAVVWRSLLA 591
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 246/647 (38%), Positives = 372/647 (57%), Gaps = 42/647 (6%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
+S N LI G + A++V + + S+ T+ +++ R + ++H
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQE-----SSPSQQTYELLILCCGHRSSLSDALRVHR 101
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
HIL G F+ + L+ MY+ LG + A++ FD+ ++ I +
Sbjct: 102 HILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYV---------------- 145
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
W + L G E + L+ +M G+ D+FT+ VL AC
Sbjct: 146 ---------------WNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVA 190
Query: 187 ----LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
+ L +GK+IHA + R + +V++ + LVDMY + + YA VF M +NVVS
Sbjct: 191 SECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVS 250
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIE--PDDFTLGSVISSCANLASLEEGTQFHGR 300
W+AM+ Y +NG + EA++ F M R + P+ T+ SV+ +CA+LA+LE+G HG
Sbjct: 251 WSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGY 310
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
L GL S + V +ALVT YG+CG +E R+F+ M+ RD VSW +L+S Y G +
Sbjct: 311 ILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKA 370
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
I +FE+ML++G P VT + VL ACS GLVE+G+ FE M +++GI+P +HY CM+D
Sbjct: 371 IQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVD 430
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RA RL+EA + M P W +LL SCRIHGNVE+ + A+ L L+P N +
Sbjct: 431 LLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGN 490
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLL+ IYA WD V ++++ + +G++K PG W++ + +++ F + D +P +QI
Sbjct: 491 YVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQI 550
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
+A L KL M ++GY+P VL+++E EK +++ HSEKLA+AFGL+ G PIR+
Sbjct: 551 HAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRI 610
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLR+C DCH TK+ISK ++EILVRD RFH FKNG CSCGD+W
Sbjct: 611 TKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 114/238 (47%), Gaps = 35/238 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGL-GNLSRITFSTMLIMSSSRRCVD 59
MP + VSW+ +I+ +A +G +A++ + M+++ + + +T ++L +S ++
Sbjct: 243 MPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALE 302
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G+ IHG+IL+ G S + V S LV MY + G + +R FD + ++++V
Sbjct: 303 QGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVV---------- 352
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
SW ++I+ +G ++AI +F EM G + TF S
Sbjct: 353 ---------------------SWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVS 391
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
VL AC +EEGK++ + R DH K + + +VD+ + + A + + M
Sbjct: 392 VLGACSHEGLVEEGKRLFETMWR-DHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDM 448
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 247/648 (38%), Positives = 389/648 (60%), Gaps = 42/648 (6%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V+W L+I+ A +G ++A+ ++ ML R T + ++ + + + + LG+++H
Sbjct: 227 VTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHS 286
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+++ G + VG LVDMYAK GL V+E
Sbjct: 287 WVIRSGLVLDLCVGCSLVDMYAKCGL-------------------------------VQE 315
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNG--LEREAIDLFREMRLEG-LAMDQFTFGSVLTA 183
+R++F GM++ + +SWT ++ G ++ G EREA+ +F M L+G +A + FTF VL A
Sbjct: 316 ARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKA 375
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C L + G+Q+H I+ VG+ LV +Y K ++ A F + KN+VS
Sbjct: 376 CASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSE 435
Query: 244 TAM----LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
T + + + N SE+ + +G+ FT S++S A + ++ +G Q H
Sbjct: 436 TVVDDTNVKDFNLN--SEQDLDREVEYVGSGVSS--FTYASLLSGAACIGTIGKGEQIHA 491
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ G + ++V+NAL++ Y KCGN E + ++FN+M + ++WT++++G+AK G A++
Sbjct: 492 MVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASK 551
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
++LF ML G+KP++VT I VLSACS GL+++ +F M +GI P +HY CM+
Sbjct: 552 ALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMV 611
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L R+G L EA FIN MPF DA+ W T L SCR+H N ++G+ AA+ +LE +P++PA
Sbjct: 612 DLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPA 671
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+Y+LLS++YA++G+W+ V+ +R+ M++K + K+ G SWI+ +++VH F D P + Q
Sbjct: 672 TYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQ 731
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY +L++L K+ GYVP+ VLHDVE +K + L HSEKLA+AF L+ P PIR
Sbjct: 732 IYEKLDELALKIKNVGYVPNTDFVLHDVEDEQKEQYLFQHSEKLAVAFALISTPNPKPIR 791
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V KNLRVC DCH A KYIS ++ REI+VRDA RFH K+G CSC D+W
Sbjct: 792 VFKNLRVCGDCHTAIKYISMVSGREIVVRDANRFHHMKDGTCSCNDYW 839
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 150/509 (29%), Positives = 249/509 (48%), Gaps = 44/509 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYN-LMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQ 63
D VS++ +IS A++ + AV++++ L+L+DG+ + F+ ++ G
Sbjct: 119 DVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYP-NEYCFTAVIRACLKGGFFKTGLC 177
Query: 64 IHGHILKFG-FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
+ G +LK G F S+V VG L+DM+ K + D
Sbjct: 178 LFGFVLKTGYFDSHVCVGCELIDMFVKGCSLAD--------------------------- 210
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL-EGLAMDQFTFGSVL 181
+E +R++F M++K+ ++WT MIT L Q G EAIDLF EM + G D+FT ++
Sbjct: 211 -LESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLI 269
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+ C + L GK++H+++IR+ ++ VG +LVDMY KC ++ A VF M NV+
Sbjct: 270 SVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVM 329
Query: 242 SWTAMLVGY--GQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
SWTA++ GY G G EA+++F NM + G+ P+ FT V+ +CA+L + G Q H
Sbjct: 330 SWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVH 389
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G+++ GL + V N LV+ Y K G +E + + F+ + ++ VS T + K N
Sbjct: 390 GQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLN 449
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
DL ++ G T +LS + G + KG ++VK G R +
Sbjct: 450 SEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVK-IGFRTDLSVNNAL 508
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLE--LDPY 476
I + S+ G E A N M + I W ++++ HG ++LE + P
Sbjct: 509 ISMYSKCGNKEAALQVFNDME-DCNVITWTSIINGFAKHGFASKALELFYNMLETGVKP- 566
Query: 477 NPASYVLLSSIYASKG----KWDHVSQLR 501
N +Y+ + S + G W H + +R
Sbjct: 567 NDVTYIAVLSACSHVGLIDEAWKHFTSMR 595
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 189/356 (53%), Gaps = 17/356 (4%)
Query: 90 LGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKD--KDSISWTTMIT 147
LG + K LP +++ N++IT + + +F+ M++ +D +S++++I+
Sbjct: 70 LGKLLHHKLTTSNLPLDTLLL-NSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIIS 128
Query: 148 GLMQNGLEREAIDLFREMRLE-GLAMDQFTFGSVLTAC--GGLLALEEGKQIHAFIIRND 204
N +A+++F ++ L+ G+ +++ F +V+ AC GG + G + F+++
Sbjct: 129 CFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFF--KTGLCLFGFVLKTG 186
Query: 205 HKDN-VFVGSALVDMY---CKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAV 260
+ D+ V VG L+DM+ C ++ A VF M KNVV+WT M+ Q G ++EA+
Sbjct: 187 YFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAI 246
Query: 261 KIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTF 319
+F M +G PD FTL +IS CA + L G + H + +GL+ + V +LV
Sbjct: 247 DLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDM 306
Query: 320 YGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA--NETIDLFEKMLSH-GLKPDE 376
Y KCG ++++ ++F+ M + +SWTALV+GY + G E + +F ML G+ P+
Sbjct: 307 YAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNC 366
Query: 377 VTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAK 432
T GVL AC+ + G +K G+ I ++ + +++GR+E A+
Sbjct: 367 FTFSGVLKACASLPDFDFGEQVHGQTIK-LGLSAIDCVGNGLVSVYAKSGRMESAR 421
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 84/185 (45%), Gaps = 9/185 (4%)
Query: 281 VISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM--NV 338
++ C + G H + + L + N+L+T Y K + + +F M +
Sbjct: 58 LLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSK 117
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEK-MLSHGLKPDEVTLIGVLSACSRAGLVEKGRH 397
RD VS+++++S +A + +++F++ +L G+ P+E V+ AC + G + G
Sbjct: 118 RDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLC 177
Query: 398 YFEIMVKEYGIRPIHDHYTC-MIDILSRA---GRLEEAKSFINKMPFPPDAIGWATLLSS 453
F ++K G H C +ID+ + LE A+ +KM + + W +++
Sbjct: 178 LFGFVLKT-GYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMR-EKNVVTWTLMITR 235
Query: 454 CRIHG 458
+G
Sbjct: 236 LAQYG 240
>gi|225441064|ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Vitis vinifera]
Length = 882
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 246/652 (37%), Positives = 376/652 (57%), Gaps = 6/652 (0%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SWN +IS A +++ M + + T ST+L+ + + +
Sbjct: 232 MPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLASM-V 290
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR+IH H++K GF S + V + L+ Y K G I F+++ ++++ + MIT +
Sbjct: 291 GREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYME 350
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL + + +F M ++SIS+ +++G QNG +A+ F M EG+ + FT V
Sbjct: 351 FGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGV 410
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L ACG L+ + KQIH FI++ N + +AL+DM +C + A+ +F ++
Sbjct: 411 LNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQS 470
Query: 241 --VSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQF 297
+ WT+M+ GY +N EEA+ +FC Q G + D +V+ C LA E G Q
Sbjct: 471 GSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQI 530
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H +L +G +S + V N+++T Y KC N++D+ ++FN M D VSW L++G+ +
Sbjct: 531 HCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQG 590
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSAC--SRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
+E + ++ KM G+KPD VT + ++SA + + LV+ R F M Y I P +HY
Sbjct: 591 DEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTVEHY 650
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
T ++ +L G LEEA+ INKMP P+A W LL +CRIH N IGK AA+ LL + P
Sbjct: 651 TSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAAKHLLAMKP 710
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSP 535
+P++Y+L+S++Y++ G+W +R MR KG RK PG SWI ++++VH F A D S P
Sbjct: 711 LDPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSWIIHENKVHSFYARDKSHP 770
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
+ I++ LE L + +K GYVPD S VLH+VE +K L +HS K+A +GLL PG
Sbjct: 771 QAKDIHSGLELLIMECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKIAATYGLLMTRPG 830
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
PIR+VKN+ +C DCH KY+S +T REI +RDA H F NG+CSC D+W
Sbjct: 831 RPIRIVKNILLCGDCHTFLKYVSIVTGREIFLRDASGHHCFLNGQCSCKDYW 882
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/518 (25%), Positives = 236/518 (45%), Gaps = 71/518 (13%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VS+ +ISG A A++++ M G+ L+ +F +L + ++LG Q+H
Sbjct: 137 VSYTAMISGFAKSNRERQAMEIFFRMRSSGI-ELNEFSFVAILTVCIRLLDLELGCQLHA 195
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++K GF +Y FV + L+ +Y K G + + FDE+P ++I +NT+I+ +++ + E
Sbjct: 196 IVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYER 255
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+ LFR M+ R++G +D FT ++L A G
Sbjct: 256 AFELFRDMR------------------------------RIDGFRIDHFTLSTILVAARG 285
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT-- 244
L ++ G++IHA +I+ + N+ V +AL+ Y KC SIK+ ++F M ++V++WT
Sbjct: 286 LASM-VGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEM 344
Query: 245 -----------------------------AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDD 275
A+L G+ QNG +A+ FC M G+E D
Sbjct: 345 ITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTD 404
Query: 276 FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRL--F 333
FTL V+++C L + Q HG L G S + AL+ +CG + D+ ++
Sbjct: 405 FTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQ 464
Query: 334 NEMNVRDEVSWTALVSGYAKFGKANETIDLF-EKMLSHGLKPDEVTLIGVLSACSRAGLV 392
+ + WT+++ GYA+ + E I LF + L + D+V VL C
Sbjct: 465 GSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFH 524
Query: 393 EKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
E G+ +K G +I + S+ +++A N MP D + W L++
Sbjct: 525 EMGKQIHCHALKS-GFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMP-AHDIVSWNGLIA 582
Query: 453 SCRIH--GNVEIGKWAAESLLELDPYNPASYVLLSSIY 488
+H G+ + W+ + P + ++VL+ S Y
Sbjct: 583 GHLLHRQGDEALSVWSKMEKAGIKP-DTVTFVLIISAY 619
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 194/356 (54%), Gaps = 16/356 (4%)
Query: 106 KNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM 165
++I + N +I L+ G+V + ++F G+ + +S+T MI+G ++ ER+A+++F M
Sbjct: 103 EDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRM 162
Query: 166 RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI 225
R G+ +++F+F ++LT C LL LE G Q+HA +I+ + FV +AL+ +Y KC +
Sbjct: 163 RSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYL 222
Query: 226 KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR-NGIEPDDFTLGSVISS 284
+F M +++ SW ++ + E A ++F +M+R +G D FTL +++ +
Sbjct: 223 DSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVA 282
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
LAS+ G + H + G S I+V NAL+ FY KCG+I+ LF +M VRD ++W
Sbjct: 283 ARGLASM-VGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITW 341
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
T +++ Y +FG + +++F+KM + + ++ +LS + G K +F MV+
Sbjct: 342 TEMITAYMEFGLTDLALEVFDKMPAR----NSISYNAILSGFCQNGEGSKALAFFCRMVE 397
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAK------SFINKMPFPPDAIGWATLLSSC 454
E G+ T +L+ G L EAK FI K F +A A LL C
Sbjct: 398 E-GVELTDFTLT---GVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMC 449
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 156/323 (48%), Gaps = 13/323 (4%)
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
+E K +HA I + +++ + +AL+ Y K + A VF ++ NVVS+TAM+ G
Sbjct: 88 VELIKAVHASIFK--LAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISG 145
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
+ ++ +A++IF M+ +GIE ++F+ ++++ C L LE G Q H + G +++
Sbjct: 146 FAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNY 205
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
VSNAL+ YGKCG ++ +LF+EM RD SW ++S K +LF M
Sbjct: 206 TFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRR 265
Query: 370 -HGLKPDEVTLIGVLSAC-SRAGLVEKGRHYFEIMVK-EYGIRPIHDHYTCMIDILSRAG 426
G + D TL +L A A +V + H I + E I I+ +I ++ G
Sbjct: 266 IDGFRIDHFTLSTILVAARGLASMVGREIHAHVIKIGFESNISVIN----ALIRFYTKCG 321
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
++ + KM D I W ++++ G ++ A E ++ N SY + S
Sbjct: 322 SIKHVVALFEKMRV-RDVITWTEMITAYMEFGLTDL---ALEVFDKMPARNSISYNAILS 377
Query: 487 IYASKGKWDHVSQLRRTMREKGV 509
+ G+ M E+GV
Sbjct: 378 GFCQNGEGSKALAFFCRMVEEGV 400
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/591 (39%), Positives = 356/591 (60%), Gaps = 40/591 (6%)
Query: 88 AKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMIT 147
A+ G I DAK FD++ E N+V +N MITG ++ +V+E+ LF M +++ISW MI
Sbjct: 332 ARYGRIDDAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIA 391
Query: 148 GLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKD 207
G +NG +A+ + + +G+ + S AC + ALE GKQ+H+ ++ +
Sbjct: 392 GYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQF 451
Query: 208 NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQ 267
N +V +AL+ +Y K +SI +F M K+ VS+ + + QN +EA +F NM
Sbjct: 452 NSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMP 511
Query: 268 RNGIEPDDFTLGSVISSCA-----------------------------------NLASLE 292
PD + ++IS+CA NL + +
Sbjct: 512 ----SPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLGAPQ 567
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
G Q H ++ G+ S + V+NALV+ Y KC + DS ++F+ M RD +W +++GYA
Sbjct: 568 LGQQIHTIAIKLGMDSGLVVANALVSMYFKCSS-ADSLKVFDSMEERDIFTWNTIITGYA 626
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
+ G E I +++ M+S G+ P+EVT +G+L ACS +GLV++G +F+ M +YG+ P+
Sbjct: 627 QHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLL 686
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLE 472
+HY CM+D+L RAG ++ A+ FI MP PD++ W+ LL +C+IH NVEIG+ AAE L
Sbjct: 687 EHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFS 746
Query: 473 LDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDW 532
++P N +YV+LS+IY+S+G WD V+++R+ M+E+GV KDPGCSW++ K+++H F D
Sbjct: 747 IEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCSWMQIKNKMHSFVTGDE 806
Query: 533 SSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFI 592
IYA L +L + GYVPD VLHD++ +K L +HSEKLA+A+GLL
Sbjct: 807 EHEQIQNIYATLWELYTLLKATGYVPDTDFVLHDIDEEQKESSLLYHSEKLAVAYGLLVT 866
Query: 593 PPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSC 643
P G+PI+++KNLR+C DCH K++S +T+REI VRD RFH F+NG CSC
Sbjct: 867 PKGMPIQIMKNLRICGDCHTFIKFVSSVTKREIDVRDGNRFHHFRNGSCSC 917
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 126/496 (25%), Positives = 226/496 (45%), Gaps = 71/496 (14%)
Query: 1 MPFHDGVSWNLLISGHASHG------SVNDAVKVYNL----MLKDGLGNLSRITFSTMLI 50
MPF D ++WN +I + ++G S+ DA+ NL +L G R+
Sbjct: 59 MPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILLSGYARAGRV------- 111
Query: 51 MSSSRRCVDLGRQIHGHILKFGFGSYVFVG-SPLVDMYAKLGLIYDAKRGFDELPEKNIV 109
+RR D G G V + +V Y + G I A++ FD +P +++
Sbjct: 112 -RDARRVFD------------GMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVS 158
Query: 110 MYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG 169
+NTM+TG L+EE+R LF M +++ +SWT MI+G + A D+FR M EG
Sbjct: 159 SWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEG 218
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK-CKSIKYA 228
+ +Q SVL+A L + IH + + + +V VG+A+++ Y K + A
Sbjct: 219 MTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSA 278
Query: 229 ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL 288
F MA +N +W+ ++ Q G ++A ++ QR+ ++ + S+++ A
Sbjct: 279 VKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVY---QRDPLKSVP-SRTSMLTGLARY 334
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
+++ + ++S+ NA++T Y + ++++ LFN M R+ +SW ++
Sbjct: 335 GRIDDAKILFDQIHEPNVVSW----NAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMI 390
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE--- 405
+GYA+ G++ + + + + G+ P +L ACS +E G+ + VK
Sbjct: 391 AGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQ 450
Query: 406 ------------YG-------IRPIHDH--------YTCMIDILSRAGRLEEAKSFINKM 438
YG +R I D Y + L + +EA+ N M
Sbjct: 451 FNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNM 510
Query: 439 PFPPDAIGWATLLSSC 454
P PD + W T++S+C
Sbjct: 511 P-SPDVVSWTTIISAC 525
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 85/170 (50%), Gaps = 8/170 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKD-GLGNLSRITFSTMLIMSSSRRCVD 59
MP D VSW +IS A N+AV+++ ML + L N +T +L +S +
Sbjct: 510 MPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTI--LLGLSGNLGAPQ 567
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
LG+QIH +K G S + V + LV MY K D+ + FD + E++I +NT+ITG
Sbjct: 568 LGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSA-DSLKVFDSMEERDIFTWNTIITGYA 626
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLM----QNGLEREAIDLFREM 165
+ GL E+ R+++ M + GL+ +GL E F+ M
Sbjct: 627 QHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSM 676
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 3/131 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +WN +I+G+A HG +A+++Y LM+ G+ + +TF +L S VD
Sbjct: 610 MEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLP-NEVTFVGLLHACSHSGLVDE 668
Query: 61 GRQIHGHILK-FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITGL 118
G Q + +G + + +VD+ + G + A+ ++P E + V+++ ++
Sbjct: 669 GHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGAC 728
Query: 119 LRRGLVEESRR 129
VE RR
Sbjct: 729 KIHKNVEIGRR 739
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 241/588 (40%), Positives = 341/588 (57%), Gaps = 32/588 (5%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+HG +L G G + + LVD+YA G + A+R FD +P++N+ ++N +I R
Sbjct: 81 GRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRNVFLWNVLIRAYAR 140
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G E + RL+RGM + G+ D FT+ V
Sbjct: 141 EGPREAAVRLYRGMVE-------------------------------HGVEPDNFTYPLV 169
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC LL LE G+++H + +VFV + +VDMY KC + A +VF +A ++
Sbjct: 170 LKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDA 229
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V W +M+ YGQNG EA+ + +M NGI P TL S +S+ A+ A+L G + HG
Sbjct: 230 VVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGF 289
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
G + +LV Y K G ++ + LF ++ R+ VSW A++ GY G A+E
Sbjct: 290 GWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEA 349
Query: 361 IDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ LF KM + PD +T +GVLSAC+ G+VE+ + +F +MV Y I+P HYTC+I
Sbjct: 350 LALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVI 409
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L GR EEA I M PD+ W LL+ C+IH NVE+G+ A + L+EL+P +
Sbjct: 410 DVLGHTGRFEEAYDLIKGMSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAG 469
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+YV LS+IYA GKW+ +++R+ M +G++K CSWI+ K + H F D S P SD+
Sbjct: 470 NYVHLSNIYAQSGKWEKAARVRKLMTNRGLKKILACSWIELKGKTHGFLVGDASHPRSDE 529
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY ELE+L M GYVPD+ V H+V+ EK M+ HSE+LAIAFGL+ PPG +
Sbjct: 530 IYGELERLEGLMSDAGYVPDIIPVFHNVDDDEKRNMVRSHSERLAIAFGLISTPPGTKLL 589
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V KNLRVC DCH K IS+I QREI++RD R+H F NGECSC D+W
Sbjct: 590 VTKNLRVCEDCHVVIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 150/285 (52%), Gaps = 6/285 (2%)
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
S+L +C +L G+Q+H ++ + + + + LVD+Y C + +A +F M +
Sbjct: 67 SILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKR 126
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
NV W ++ Y + G E AV+++ M +G+EPD+FT V+ +CA L LE G + H
Sbjct: 127 NVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVH 186
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
R T + V +V Y KCG ++D+ +F+ + VRD V W ++++ Y + G+
Sbjct: 187 QRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPM 246
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR--HYFEIMVKEYGIRPIHDHYT 416
E + L M ++G+ P TL+ +SA + A + +GR H F + +G++ T
Sbjct: 247 EALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWR-RGFGLQ--DKLKT 303
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
++D+ +++G ++ A+ ++ + + W ++ +HG+ +
Sbjct: 304 SLVDMYAKSGWVQVARVLFEQL-MKRELVSWNAMICGYGMHGHAD 347
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 171/359 (47%), Gaps = 47/359 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + WN+LI +A G AV++Y M++ G+ F+ L++ + +DL
Sbjct: 123 MPKRNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGV---EPDNFTYPLVLKACAALLDL 179
Query: 61 --GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
GR++H + +G VFV + +VDMYAK G + DA+ FD + ++ V++N
Sbjct: 180 ETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWN------ 233
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+MI QNG EA+ L R+M G+ T
Sbjct: 234 -------------------------SMIAAYGQNGRPMEALALCRDMAANGIGPTIATLV 268
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
S ++A AL G+++H F R + ++LVDMY K ++ A +F + +
Sbjct: 269 SAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKR 328
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQF 297
+VSW AM+ GYG +G ++EA+ +F M+ + + PD+ T V+S+C + +EE +F
Sbjct: 329 ELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEF 388
Query: 298 -----HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
+ S+ + + V + L G G E+++ L M++ D W AL++G
Sbjct: 389 FYLMVNAYSIKPTVQHYTCVIDVL----GHTGRFEEAYDLIKGMSIEPDSGIWGALLNG 443
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 255/663 (38%), Positives = 372/663 (56%), Gaps = 50/663 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+WN +IS G +AV+V M+ G+ +TF++ L S + LGR++
Sbjct: 246 DVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGV-RPDGVTFASALPACSRLEMLALGREM 304
Query: 65 HGHILKFG-FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
H +LK + FV S LVDMYA + A+R FD +PE
Sbjct: 305 HAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEP----------------- 347
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQFTFGSVLT 182
SR+L GM W MI G Q G++ EA++LF M E G A + T VL
Sbjct: 348 ---SRQL--GM-------WNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLP 395
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
AC + +H ++++ N FV +AL+DMY + + A +F + ++VVS
Sbjct: 396 ACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVS 455
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQ----------------RNGIEPDDFTLGSVISSCA 286
W ++ G G + EA ++ MQ + P++ TL +++ CA
Sbjct: 456 WNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCA 515
Query: 287 NLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTA 346
LA+ G + HG ++ L S I V +ALV Y KCG + S +F+ + R+ ++W
Sbjct: 516 ALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNV 575
Query: 347 LVSGYAKFGKANETIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE 405
L+ Y G +E + LF++M + G P+EVT I L+ACS +GLV++G F M ++
Sbjct: 576 LIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERD 635
Query: 406 YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM-PFPPDAIGWATLLSSCRIHGNVEIGK 464
+G++P D + C++D+L RAGRL+EA S I M P W++LL +CR+H NVE+G+
Sbjct: 636 HGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRNVELGE 695
Query: 465 WAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRV 524
AAE L EL+P + YVLL +IY++ G WD +R MR +GV K+PGCSWI+ +
Sbjct: 696 VAAERLFELEPGEASHYVLLCNIYSAAGMWDKSVAVRVRMRRQGVAKEPGCSWIELDGAI 755
Query: 525 HIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLA 584
H F A + S P S +++A ++ L +M +EGY PD S VLHDV+ EK ML +HSEKLA
Sbjct: 756 HRFMAGESSHPASAEVHAHMDALWERMRREGYAPDTSCVLHDVDEDEKAAMLRYHSEKLA 815
Query: 585 IAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCG 644
IAFGLL PPG IRV KNLRVC+DCH A K++SK+ R+I++RD RFH F++G CSCG
Sbjct: 816 IAFGLLRAPPGAAIRVAKNLRVCNDCHEAAKFMSKMVGRDIVLRDVRRFHHFRDGSCSCG 875
Query: 645 DFW 647
D+W
Sbjct: 876 DYW 878
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 131/485 (27%), Positives = 219/485 (45%), Gaps = 59/485 (12%)
Query: 3 FHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD--- 59
D VS+N LIS A+ ML +G ++S T ++L+ S D
Sbjct: 130 LRDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRR 189
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
LGR+ H LK GF DE E+ +N +++
Sbjct: 190 LGREAHAFALKRGF--------------------------LDEGRER--FPFNALLSMYA 221
Query: 120 RRGLVEESRRLFRGMKDK------DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
R GLV++++ LFR D ++W TMI+ L+Q G EA+++ +M G+ D
Sbjct: 222 RLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPD 281
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRN-DHKDNVFVGSALVDMYCKCKSIKYAESVF 232
TF S L AC L L G+++HA ++++ D N FV SALVDMY + + A VF
Sbjct: 282 GVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVF 341
Query: 233 RTMAW--KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQ-RNGIEPDDFTLGSVISSCANLA 289
+ + + W AM+ GY Q G EEA+++F M+ G P + T+ V+ +CA
Sbjct: 342 DMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSE 401
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
HG + G+ V NAL+ Y + G ++ + R+F ++ RD VSW L++
Sbjct: 402 GFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLIT 461
Query: 350 GYAKFGKANETIDLFEKML----------------SHGLKPDEVTLIGVLSACSRAGLVE 393
G G A E L +M +H P+ +TL+ +L C+
Sbjct: 462 GCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPA 521
Query: 394 KGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+G+ V+ + + + ++D+ ++ G L +++ +++P + I W L+ +
Sbjct: 522 RGKEIHGYAVR-HALESDIAVGSALVDMYAKCGCLAASRAVFDRLP-RRNVITWNVLIMA 579
Query: 454 CRIHG 458
+HG
Sbjct: 580 YGMHG 584
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 168/343 (48%), Gaps = 23/343 (6%)
Query: 137 KDSISWTTMITGLMQNGLEREAIDLFREMRLEGL-AMDQFTFGSVLTACGGLLALEE--- 192
+D++S+ ++I+ L A+D R+M EG + FT SVL AC L +
Sbjct: 131 RDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRL 190
Query: 193 GKQIHAFIIRN---DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK------NVVSW 243
G++ HAF ++ D F +AL+ MY + + A+S+FRT A +VV+W
Sbjct: 191 GREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTW 250
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
M+ Q G EAV++ +M G+ PD T S + +C+ L L G + H L
Sbjct: 251 NTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLK 310
Query: 304 TG-LISFITVSNALVTFYGKCGNIEDSHRLFNEM--NVRDEVSWTALVSGYAKFGKANET 360
L + V++ALV Y + + R+F+ + R W A++ GYA+ G E
Sbjct: 311 DADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEA 370
Query: 361 IDLFEKMLSH-GLKPDEVTLIGVLSACSRA-GLVEK-GRHYFEIMVKEYGIRPIHDHYTC 417
++LF +M + G P E T+ GVL AC+R+ G K H + + G R + +
Sbjct: 371 LELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQN---A 427
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
++D+ +R G ++ A+ I M P D + W TL++ C + G+
Sbjct: 428 LMDMYARLGEMDVARR-IFAMIDPRDVVSWNTLITGCVVQGHA 469
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 136/298 (45%), Gaps = 18/298 (6%)
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRND--HKDNVFVGSALVDMYCKCKSIKYAE 229
+D F + + L + +HA +R H+ + VG+AL+ Y +C + A
Sbjct: 61 LDHFALPPAIKSAAALRDARAARSLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAAL 120
Query: 230 SVFRTMA--WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGI-EPDDFTLGSVISSCA 286
++F A ++ VS+ +++ E A+ +M G + FTL SV+ +C+
Sbjct: 121 ALFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACS 180
Query: 287 NLASLEE---GTQFHGRSLVTGLISFITVS---NALVTFYGKCGNIEDSHRLFNEMNVR- 339
+L + G + H +L G + NAL++ Y + G ++D+ LF
Sbjct: 181 HLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAF 240
Query: 340 -----DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEK 394
D V+W ++S + G+ E +++ M+S G++PD VT L ACSR ++
Sbjct: 241 SPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLAL 300
Query: 395 GRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIG-WATLL 451
GR +++K+ + + ++D+ + ++ A+ + +P P +G W ++
Sbjct: 301 GREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMI 358
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 80/208 (38%), Gaps = 43/208 (20%)
Query: 274 DDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI--SFITVSNALVTFYGKCG--NIEDS 329
D F L I S A L H +L L+ V NAL+T Y +CG + +
Sbjct: 62 DHFALPPAIKSAAALRDARAARSLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAALA 121
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKP-DEVTLIGVLSACS- 387
+RD VS+ +L+S F + +D ML+ G TL+ VL ACS
Sbjct: 122 LFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSH 181
Query: 388 ------------------RAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLE 429
+ G +++GR F + ++ + +R G ++
Sbjct: 182 LPGDDGRRLGREAHAFALKRGFLDEGRERFP--------------FNALLSMYARLGLVD 227
Query: 430 EAKSFI--NKMPFPP---DAIGWATLLS 452
+A+S F P D + W T++S
Sbjct: 228 DAQSLFRTTAAAFSPGGGDVVTWNTMIS 255
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + ++WN+LI + HG ++AV +++ M G + +TF L S VD
Sbjct: 565 LPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDR 624
Query: 61 GRQI-HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDA 96
G ++ HG G + + +VD+ + G + +A
Sbjct: 625 GLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEA 661
>gi|297740028|emb|CBI30210.3| unnamed protein product [Vitis vinifera]
Length = 900
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 246/652 (37%), Positives = 376/652 (57%), Gaps = 6/652 (0%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SWN +IS A +++ M + + T ST+L+ + + +
Sbjct: 250 MPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLASM-V 308
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR+IH H++K GF S + V + L+ Y K G I F+++ ++++ + MIT +
Sbjct: 309 GREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYME 368
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL + + +F M ++SIS+ +++G QNG +A+ F M EG+ + FT V
Sbjct: 369 FGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGV 428
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L ACG L+ + KQIH FI++ N + +AL+DM +C + A+ +F ++
Sbjct: 429 LNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQS 488
Query: 241 --VSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQF 297
+ WT+M+ GY +N EEA+ +FC Q G + D +V+ C LA E G Q
Sbjct: 489 GSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQI 548
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H +L +G +S + V N+++T Y KC N++D+ ++FN M D VSW L++G+ +
Sbjct: 549 HCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQG 608
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSAC--SRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
+E + ++ KM G+KPD VT + ++SA + + LV+ R F M Y I P +HY
Sbjct: 609 DEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTVEHY 668
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
T ++ +L G LEEA+ INKMP P+A W LL +CRIH N IGK AA+ LL + P
Sbjct: 669 TSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAAKHLLAMKP 728
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSP 535
+P++Y+L+S++Y++ G+W +R MR KG RK PG SWI ++++VH F A D S P
Sbjct: 729 LDPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSWIIHENKVHSFYARDKSHP 788
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
+ I++ LE L + +K GYVPD S VLH+VE +K L +HS K+A +GLL PG
Sbjct: 789 QAKDIHSGLELLIMECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKIAATYGLLMTRPG 848
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
PIR+VKN+ +C DCH KY+S +T REI +RDA H F NG+CSC D+W
Sbjct: 849 RPIRIVKNILLCGDCHTFLKYVSIVTGREIFLRDASGHHCFLNGQCSCKDYW 900
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/518 (25%), Positives = 236/518 (45%), Gaps = 71/518 (13%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VS+ +ISG A A++++ M G+ L+ +F +L + ++LG Q+H
Sbjct: 155 VSYTAMISGFAKSNRERQAMEIFFRMRSSGI-ELNEFSFVAILTVCIRLLDLELGCQLHA 213
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++K GF +Y FV + L+ +Y K G + + FDE+P ++I +NT+I+ +++ + E
Sbjct: 214 IVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYER 273
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+ LFR M+ R++G +D FT ++L A G
Sbjct: 274 AFELFRDMR------------------------------RIDGFRIDHFTLSTILVAARG 303
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT-- 244
L ++ G++IHA +I+ + N+ V +AL+ Y KC SIK+ ++F M ++V++WT
Sbjct: 304 LASM-VGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEM 362
Query: 245 -----------------------------AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDD 275
A+L G+ QNG +A+ FC M G+E D
Sbjct: 363 ITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTD 422
Query: 276 FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRL--F 333
FTL V+++C L + Q HG L G S + AL+ +CG + D+ ++
Sbjct: 423 FTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQ 482
Query: 334 NEMNVRDEVSWTALVSGYAKFGKANETIDLF-EKMLSHGLKPDEVTLIGVLSACSRAGLV 392
+ + WT+++ GYA+ + E I LF + L + D+V VL C
Sbjct: 483 GSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFH 542
Query: 393 EKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
E G+ +K G +I + S+ +++A N MP D + W L++
Sbjct: 543 EMGKQIHCHALKS-GFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMP-AHDIVSWNGLIA 600
Query: 453 SCRIH--GNVEIGKWAAESLLELDPYNPASYVLLSSIY 488
+H G+ + W+ + P + ++VL+ S Y
Sbjct: 601 GHLLHRQGDEALSVWSKMEKAGIKP-DTVTFVLIISAY 637
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 194/356 (54%), Gaps = 16/356 (4%)
Query: 106 KNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM 165
++I + N +I L+ G+V + ++F G+ + +S+T MI+G ++ ER+A+++F M
Sbjct: 121 EDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRM 180
Query: 166 RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI 225
R G+ +++F+F ++LT C LL LE G Q+HA +I+ + FV +AL+ +Y KC +
Sbjct: 181 RSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYL 240
Query: 226 KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR-NGIEPDDFTLGSVISS 284
+F M +++ SW ++ + E A ++F +M+R +G D FTL +++ +
Sbjct: 241 DSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVA 300
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
LAS+ G + H + G S I+V NAL+ FY KCG+I+ LF +M VRD ++W
Sbjct: 301 ARGLASM-VGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITW 359
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
T +++ Y +FG + +++F+KM + + ++ +LS + G K +F MV+
Sbjct: 360 TEMITAYMEFGLTDLALEVFDKMPAR----NSISYNAILSGFCQNGEGSKALAFFCRMVE 415
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAK------SFINKMPFPPDAIGWATLLSSC 454
E G+ T +L+ G L EAK FI K F +A A LL C
Sbjct: 416 E-GVELTDFTLT---GVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMC 467
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 154/319 (48%), Gaps = 13/319 (4%)
Query: 194 KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQN 253
K +HA I + +++ + +AL+ Y K + A VF ++ NVVS+TAM+ G+ ++
Sbjct: 110 KAVHASIFK--LAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKS 167
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVS 313
+A++IF M+ +GIE ++F+ ++++ C L LE G Q H + G +++ VS
Sbjct: 168 NRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVS 227
Query: 314 NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS-HGL 372
NAL+ YGKCG ++ +LF+EM RD SW ++S K +LF M G
Sbjct: 228 NALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGF 287
Query: 373 KPDEVTLIGVLSAC-SRAGLVEKGRHYFEIMVK-EYGIRPIHDHYTCMIDILSRAGRLEE 430
+ D TL +L A A +V + H I + E I I+ +I ++ G ++
Sbjct: 288 RIDHFTLSTILVAARGLASMVGREIHAHVIKIGFESNISVIN----ALIRFYTKCGSIKH 343
Query: 431 AKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYAS 490
+ KM D I W ++++ G ++ A E ++ N SY + S +
Sbjct: 344 VVALFEKMRV-RDVITWTEMITAYMEFGLTDL---ALEVFDKMPARNSISYNAILSGFCQ 399
Query: 491 KGKWDHVSQLRRTMREKGV 509
G+ M E+GV
Sbjct: 400 NGEGSKALAFFCRMVEEGV 418
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 250/648 (38%), Positives = 369/648 (56%), Gaps = 68/648 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M HD VS+N +I+G + +G + A++ + M ++G + + T ++L S +
Sbjct: 115 MSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFES-TDYTHVSVLHACSQLLDIKR 173
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIHG I+ G VFV + L +MYAK G +
Sbjct: 174 GKQIHGRIVATSLGESVFVWNALTNMYAKCGAL--------------------------- 206
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+++R LF M +K+ +SW +MI+G +QNG LF EM+ GL DQ T ++
Sbjct: 207 ----DQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNI 262
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+A Y +C I A FR + K+
Sbjct: 263 LSA-----------------------------------YFQCGYIDEACKTFREIKEKDK 287
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V WT M+VG QNG E+A+ +F M + PD+FT+ SV+SSCA LASL +G HG+
Sbjct: 288 VCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGK 347
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+++ G+ + VS+ALV Y KCG D+ +F M R+ +SW +++ GYA+ GK E
Sbjct: 348 AVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEA 407
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ L+E+ML LKPD +T +GVLSAC AGLVE+G+ YF + K +G+ P DHY+CMI+
Sbjct: 408 LALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMIN 467
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG +++A I M F P+ + W+TLLS CRI+ +V G+ AA L ELDP+N
Sbjct: 468 LLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGP 527
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
Y++LS+IYA+ G+W V+ +R M+ ++K SWI+ ++VH F A+D + ++QI
Sbjct: 528 YIMLSNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQI 587
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG-LPIR 599
Y EL +L +K+ + G+ PD + VLHDV EK + +HSEKLA+AF L+ P G PIR
Sbjct: 588 YEELNRLIKKLQESGFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKPHGRTPIR 647
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
++KN+RVC DCH K++SKI +R I++RD RFH F G CSC D W
Sbjct: 648 IMKNIRVCGDCHVFMKFVSKIIRRPIILRDINRFHHFIEGRCSCKDSW 695
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 137/508 (26%), Positives = 238/508 (46%), Gaps = 81/508 (15%)
Query: 38 GNLSRITFSTMLIMSSSRRCVDLGRQIHGHI-LKFGFGSYVFVGSPLVDMYAKLGLIYDA 96
G + +++ +L+ V +++ H+ L + F+ + L+ +YAK G + DA
Sbjct: 18 GTANSESYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLHLYAKSGNLSDA 77
Query: 97 KRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLER 156
+ FD++ +++ +N M++ + G VE+ R +F M D++S+ T+I G NG
Sbjct: 78 RDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSS 137
Query: 157 EAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALV 216
+A++ F M+ EG +T SVL AC LL ++ GKQIH I+ ++VFV +AL
Sbjct: 138 QALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALT 197
Query: 217 DMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDF 276
+MY KC ++ A +F M KNVVSW +M+ GY QNG E K+FC MQ +G+ PD
Sbjct: 198 NMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQV 257
Query: 277 TLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
T+ +++S+ Y +CG I+++ + F E+
Sbjct: 258 TISNILSA-----------------------------------YFQCGYIDEACKTFREI 282
Query: 337 NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR 396
+D+V WT ++ G A+ GK + + LF +ML ++PD T+ V+S+C+R + +G+
Sbjct: 283 KEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQ 342
Query: 397 HYFEIMVKEYGIRPIHDH----YTCMIDILSRAGRLEEAKSFINKM-------------- 438
V +G+ DH + ++D+ S+ G +A +M
Sbjct: 343 AVHGKAVI-FGV----DHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILG 397
Query: 439 --------------------PFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
PD I + +LS+C G VE G+ S+ ++ NP
Sbjct: 398 YAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNP 457
Query: 479 A--SYVLLSSIYASKGKWDHVSQLRRTM 504
Y + ++ G D L ++M
Sbjct: 458 TFDHYSCMINLLGRAGYMDKAVDLIKSM 485
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/418 (29%), Positives = 202/418 (48%), Gaps = 71/418 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKV-----------YNLMLKDGLGN---------- 39
M D SWN ++S ++ G+V D V YN ++ GN
Sbjct: 84 MSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFF 143
Query: 40 -------LSRITFSTMLIMSSSRRCVDL--GRQIHGHILKFGFGSYVFVGSPLVDMYAKL 90
++ + ++ + + +D+ G+QIHG I+ G VFV + L +MYAK
Sbjct: 144 VRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKC 203
Query: 91 GLIYDAKRGFDELPEKNIVMYNTMITGLLRR----------------------------- 121
G + A+ FD + KN+V +N+MI+G L+
Sbjct: 204 GALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNIL 263
Query: 122 ------GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
G ++E+ + FR +K+KD + WTTM+ G QNG E +A+ LFREM LE + D F
Sbjct: 264 SAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNF 323
Query: 176 TFGSVLTACGGLLALEEGKQIH--AFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
T SV+++C L +L +G+ +H A I DH ++ V SALVDMY KC A VF+
Sbjct: 324 TISSVVSSCARLASLCQGQAVHGKAVIFGVDH--DLLVSSALVDMYSKCGETADAWIVFK 381
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE 293
M +NV+SW +M++GY QNG EA+ ++ M ++PD+ T V+S+C + +E
Sbjct: 382 RMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVER 441
Query: 294 GT-QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE-VSWTALVS 349
G F+ S + G+ + ++ G+ G ++ + L M + W+ L+S
Sbjct: 442 GQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLS 499
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/648 (37%), Positives = 386/648 (59%), Gaps = 33/648 (5%)
Query: 12 LISGHASHGSVNDAVKVYNLM-LKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILK 70
+I+G+ + + DA+K+++ M ++D +++++M+ + C+D G
Sbjct: 49 MIAGYTRNDRLCDALKLFDRMSVRD------VVSWNSMI-----KGCLDCG--------N 89
Query: 71 FGFGSYVFVGSP---------LVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
G + +F P +V+ Y K G + A+R F ++ K++ +N M+ G
Sbjct: 90 LGMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRLFLDMHVKDVAAWNAMVHGYFEN 149
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G VEE RLF M +D ISWT+MI GL NG EA+ +F++M G+ TF VL
Sbjct: 150 GRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVL 209
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+AC + G Q+H +++ + F+ +L+ Y C I++A +F KNVV
Sbjct: 210 SACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVV 269
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
WTA+L Y N ++A+++F +M + G P+ T + +C L +L++G + H +
Sbjct: 270 KWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMA 329
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ GL + + V N+LV Y +CGN+ + +F +N +D VSW +++ G A+ G +
Sbjct: 330 IKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWAL 389
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM--VKEYGIRPIHDHYTCMI 419
F +M+ G+ P+E+T G+LSACSR+G++ KGR +FE + K +RP HY CM+
Sbjct: 390 IFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRP--QHYACMV 447
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
DIL R G+L+EA+ + MP +++ W LLS+CR+H N+E+ + AA+ +L+L+P +
Sbjct: 448 DILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVHSNLEVAERAAKHILDLEPNCSS 507
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+YVLLS+IYAS G+W VS++R M++ G+ K PG SW+ + + H F + D S P S++
Sbjct: 508 AYVLLSNIYASAGRWADVSRMRVKMKQGGLVKQPGSSWVVLRGKKHEFLSADRSHPLSER 567
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY +L+ L +K+ + GYVPD LHDVE +K +ML+ HSE+LAIAFGL+ G I
Sbjct: 568 IYEKLDWLGKKLKEFGYVPDQKFALHDVEDEQKEEMLSFHSERLAIAFGLVSTVEGSTIT 627
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V+KNLRVC DCH+ K +SKI R+I+VRD+ RFH FKNG CSC D+W
Sbjct: 628 VMKNLRVCGDCHSVIKLMSKIVGRKIVVRDSGRFHHFKNGICSCSDYW 675
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 189/381 (49%), Gaps = 44/381 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D +SW +I G +G +A+ V+ ML+ G+ + TF+ +L ++ +L
Sbjct: 162 MPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGV-EPTWSTFACVLSACANAVEFNL 220
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+HGH++K G + F+ L+ YA I A + F+E KN+V
Sbjct: 221 GVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVV----------- 269
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
WT ++T + N ++A+ +F +M G +Q TF
Sbjct: 270 --------------------KWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSIT 309
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC GL AL++GK+IH I+ + +VFVG++LV MY +C ++ A +VFR + K++
Sbjct: 310 LKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDI 369
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW +++VG Q+G A+ F M R G++P++ T ++S+C+ L +G F
Sbjct: 370 VSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFF-- 427
Query: 301 SLVTGLISFITVSN---ALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGK 356
++ S + +V G+CG ++++ L M V+ + + W AL+S +
Sbjct: 428 EYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSA----CR 483
Query: 357 ANETIDLFEKMLSH--GLKPD 375
+ +++ E+ H L+P+
Sbjct: 484 VHSNLEVAERAAKHILDLEPN 504
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 195/450 (43%), Gaps = 45/450 (10%)
Query: 95 DAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGL 154
A+ FD++P N+ +Y MI G R + ++ +LF M +D +SW +MI G + G
Sbjct: 30 QARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGN 89
Query: 155 EREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSA 214
A LF EM + + S T G L + + + H +V +A
Sbjct: 90 LGMATRLFDEMPEKNVI-------SWTTMVNGYLKFGRVELAQRLFL-DMHVKDVAAWNA 141
Query: 215 LVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD 274
+V Y + ++ +F M ++V+SWT+M+ G NG SEEA+ +F M R+G+EP
Sbjct: 142 MVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPT 201
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN 334
T V+S+CAN G Q HG + G +S +L+TFY C IE +H++FN
Sbjct: 202 WSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFN 261
Query: 335 EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEK 394
E ++ V WTAL++ Y K + + +F M G P++ T L AC ++K
Sbjct: 262 ETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDK 321
Query: 395 GRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKS--------------------- 433
G+ + +K G+ ++ + + G + A +
Sbjct: 322 GKEIHTMAIK-LGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSA 380
Query: 434 ----------FINKM---PFPPDAIGWATLLSSCRIHGNVEIGKWAAE--SLLELDPYNP 478
F N+M P+ I + LLS+C G + G+ E S + + P
Sbjct: 381 QHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRP 440
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
Y + I GK D +L R M K
Sbjct: 441 QHYACMVDILGRCGKLDEAEELVRYMPVKA 470
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 115/263 (43%), Gaps = 35/263 (13%)
Query: 219 YCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
+ K + + A +F + N+ +T M+ GY +N +A+K+F M D +
Sbjct: 22 HLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVR----DVVSW 77
Query: 279 GSVISSCANLASLEEGTQFHGR----------SLVTGLISF-----------------IT 311
S+I C + +L T+ ++V G + F +
Sbjct: 78 NSMIKGCLDCGNLGMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRLFLDMHVKDVA 137
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG 371
NA+V Y + G +E+ RLF EM VRD +SWT+++ G GK+ E + +F+KML G
Sbjct: 138 AWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSG 197
Query: 372 LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC-MIDILSRAGRLEE 430
++P T VLSAC+ A G +VK H+ + +I + ++E
Sbjct: 198 VEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCF--FHEFISVSLITFYANCMKIEH 255
Query: 431 AKSFINKMPFPPDAIGWATLLSS 453
A N+ + + W LL++
Sbjct: 256 AHKIFNE-TLTKNVVKWTALLTA 277
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/644 (37%), Positives = 370/644 (57%), Gaps = 34/644 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +SWN ++S + + +A+ + ML+ G S + R ++ GR+
Sbjct: 331 DYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSR-LNNGREF 389
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H + +K + + VG+ L+DMY K G I
Sbjct: 390 HAYAIKQRLHTDLQVGNTLMDMYIKCGSI------------------------------- 418
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
E S ++F M +D ISWTT++ Q+ EA+++ E++ EG+ +D GS+L C
Sbjct: 419 ECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETC 478
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
GL ++ KQ+H + IRN D + + + L+D+Y +C ++ ++F+ + K++VSWT
Sbjct: 479 CGLKSISLLKQVHCYAIRNGLLD-LILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWT 537
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
+M+ NG AV +F MQ+ I+PD L S++ + A L+SL +G Q HG +
Sbjct: 538 SMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRR 597
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
V ++LV Y CG++ + R+F +D V WTA+++ G + IDLF
Sbjct: 598 NFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLF 657
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
++ML GL PD V+ + +L ACS + LVE+G+HY +IMV +Y ++P +HY C++DIL R
Sbjct: 658 KRMLQTGLTPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGR 717
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
+G+ EEA FI MP P + W LL +CR+H N + AA LLEL+P NP +Y+L+
Sbjct: 718 SGQTEEAYEFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILV 777
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S+++A GKW++ + R M E+G+RK+P CSWI+ + +H F++ D+ S+ I+ +L
Sbjct: 778 SNVFAEMGKWNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKL 837
Query: 545 EKLNRKMIKE-GYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
++ + +E GYV D VLHD EKI ML+ HSE++AIAFGL+ PG+PIR+ KN
Sbjct: 838 SEITEMLRREGGYVEDTRFVLHDTSEEEKIDMLHKHSERIAIAFGLISTRPGMPIRIAKN 897
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LRVC DCH TK +SK+ +R+I+VRDA RFH F G CSC DFW
Sbjct: 898 LRVCGDCHEFTKLVSKLFERDIVVRDANRFHHFSGGSCSCEDFW 941
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 149/587 (25%), Positives = 265/587 (45%), Gaps = 57/587 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSR--ITFSTMLIMSSSRRCV 58
MP SWN L+ + S GS +A++VY M + T +++L +
Sbjct: 121 MPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDG 180
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G ++HG +K G V + L+ MYAK GL+ A R F+ L +
Sbjct: 181 RCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDA----------- 229
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+D SW ++++G +QNG EA+ LFR M+ G M+ +T
Sbjct: 230 ------------------RDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSV 271
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
+VL C L L G+++HA +++ + N+ + LV MY K + A VF +A K
Sbjct: 272 AVLQVCAELGLLSLGRELHAALLKCGSELNIQCNALLV-MYAKYGRVDSALRVFGQIAEK 330
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+ +SW +ML Y QN EA+ F M ++G +PD + S+ S+ +L+ L G +FH
Sbjct: 331 DYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFH 390
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
++ L + + V N L+ Y KCG+IE S ++F M +RD +SWT +++ +A+ + +
Sbjct: 391 AYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHS 450
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
E +++ ++ G+ D + + +L C + + ++ + I ++ +
Sbjct: 451 EALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGLLDLILENR--L 508
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
IDI G + + + ++ D + W ++++ C +G + G + ++ P
Sbjct: 509 IDIYGECGEFDHSLNLFQRVE-KKDIVSWTSMINCCTNNGRLN-GAVFLFTEMQKANIQP 566
Query: 479 ASYVLLSSIYA-------SKGKWDHVSQLRRTMREKG------VRKDPGCSWIKYKSRVH 525
S L+S + A +KGK H +RR +G V GC + Y RV
Sbjct: 567 DSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVF 626
Query: 526 IFSADDWSSPYSDQIYA--------ELEKLNRKMIKEGYVPDMSSVL 564
+ ++ I A + L ++M++ G PD S L
Sbjct: 627 ERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFL 673
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 182/398 (45%), Gaps = 38/398 (9%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H H + G + + GF L K + MY R
Sbjct: 76 GRQVHAHAVT-------------------TGSLNEDDDGF--LATKLVFMYG-------R 107
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE---GLAMDQFTF 177
G V+++RRLF GM + SW ++ + +G EA+ ++ MR G A D T
Sbjct: 108 CGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTL 167
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
SVL ACG G ++H ++ + V +AL+ MY KC + A VF +
Sbjct: 168 ASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQ 227
Query: 238 --KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
++V SW +++ G QNG + EA+ +F MQ G + +T +V+ CA L L G
Sbjct: 228 DARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGR 287
Query: 296 QFHGRSLVTGLISFITVS-NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
+ H L G S + + NAL+ Y K G ++ + R+F ++ +D +SW +++S Y +
Sbjct: 288 ELHAALLKCG--SELNIQCNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQN 345
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
E ID F +ML HG +PD ++ + SA + GR + +K+ +
Sbjct: 346 SFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVG 405
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
T M D+ + G +E + M D I W T+L+
Sbjct: 406 NTLM-DMYIKCGSIECSAKVFESMGI-RDHISWTTILA 441
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 142/287 (49%), Gaps = 17/287 (5%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRN---DHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
+G VL A EG+Q+HA + + D+ F+ + LV MY +C + A +F
Sbjct: 60 YGWVLDLVAARRAAAEGRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFN 119
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN---GIEPDDFTLGSVISSCANLAS 290
M + V SW A++ Y +G + EA++++ M+ + G PD TL SV+ +C
Sbjct: 120 GMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGD 179
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN--EMNVRDEVSWTALV 348
G + HG ++ GL V+NAL+ Y KCG ++ + R+F + + RD SW ++V
Sbjct: 180 GRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVV 239
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK---E 405
SG + G+ E + LF M S G + T + VL C+ GL+ GR ++K E
Sbjct: 240 SGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSE 299
Query: 406 YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
I+ ++ + ++ GR++ A ++ D I W ++LS
Sbjct: 300 LNIQ-----CNALLVMYAKYGRVDSALRVFGQIA-EKDYISWNSMLS 340
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 122/298 (40%), Gaps = 27/298 (9%)
Query: 293 EGTQFHGRSLVTGLISFIT---VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
EG Q H ++ TG ++ ++ LV YG+CG ++D+ RLFN M R SW ALV
Sbjct: 75 EGRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVG 134
Query: 350 GYAKFGKANETIDLFEKM---LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY 406
Y G A E + ++ M + G PD TL VL AC G G + VK
Sbjct: 135 AYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVK-V 193
Query: 407 GIRPIHDHYTCMIDILSRAGRLEEA-KSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKW 465
G+ +I + ++ G L+ A + F D W +++S C +G
Sbjct: 194 GLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALA 253
Query: 466 AAESLLELD-PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCS-----WIK 519
+ P N + V + + A G +L + + G + C+ + K
Sbjct: 254 LFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQCNALLVMYAK 313
Query: 520 Y---KSRVHIFSA------DDWSSPYS----DQIYAELEKLNRKMIKEGYVPDMSSVL 564
Y S + +F W+S S + YAE +M++ G+ PD + V+
Sbjct: 314 YGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVV 371
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 242/646 (37%), Positives = 379/646 (58%), Gaps = 61/646 (9%)
Query: 3 FHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGR 62
+ D VSW +++ A + +A+K+++ M G + TF+++ D+G+
Sbjct: 202 YKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGF-KPNNFTFASVFKACLGLEAFDVGK 260
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
+HG LK + ++VG L+D+Y K G I DA+ F+E+P+
Sbjct: 261 SVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPK----------------- 303
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
KD I W+ MI Q+ +EA+++F +MR + +QFTF SVL
Sbjct: 304 --------------KDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQ 349
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN-VV 241
AC + L G QIH +I+ +VFV +AL+D+Y KC ++ + +F +N V
Sbjct: 350 ACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVT 409
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
W ++VG+ Q G E+A+++F NM ++ + T S + +CA+LA+LE G Q H +
Sbjct: 410 PWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLT 469
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ T I V+NAL+ Y KCG+I+D+ +F+ MN +DEVSW A++SGY+
Sbjct: 470 VKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSM-------- 521
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
HGL AC+ AGL+++G+ YF M++++GI P +HYTCM+ +
Sbjct: 522 --------HGL------------ACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWL 561
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
L R G L++A I+++PF P + W LL +C IH ++E+G+ +A+ +LE++P + A++
Sbjct: 562 LGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQHVLEMEPQDKATH 621
Query: 482 VLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIY 541
VLLS++YA+ +WD+V+ +R+ M+ KGV+K+PG SWI+ + VH F+ D S P I
Sbjct: 622 VLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVIN 681
Query: 542 AELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVV 601
LE L+ K K GY+P+ + VL DVE EK ++L HSE+LA++FG++ P G PIR++
Sbjct: 682 GMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIM 741
Query: 602 KNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLR+C DCH A K ISK+ QREI+VRD RFH F+ G CSCGD+W
Sbjct: 742 KNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 787
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 142/459 (30%), Positives = 236/459 (51%), Gaps = 35/459 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +S+ LI G+A +A++++ + ++G L+ F+T+L + S C +L
Sbjct: 99 MPERNTISFVTLIQGYAESVRFLEAIELFVRLHREG-HELNPFVFTTILKLLVSMDCGEL 157
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G IH I K G S FVG+ L+D Y+ G
Sbjct: 158 GWGIHACIFKLGHESNAFVGTALIDAYSVCGR---------------------------- 189
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
V+ +R +F G+ KD +SWT M+T +N +EA+ LF +MR+ G + FTF SV
Sbjct: 190 ---VDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASV 246
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
AC GL A + GK +H +++ ++ +++VG AL+D+Y K I A F + K+V
Sbjct: 247 FKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDV 306
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+ W+ M+ Y Q+ S+EAV++F M++ + P+ FT SV+ +CA + L G Q H
Sbjct: 307 IPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCH 366
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKANE 359
+ GL S + VSNAL+ Y KCG +E+S LF E R++V+ W ++ G+ + G +
Sbjct: 367 VIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEK 426
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ LF ML + ++ EVT L AC+ +E G + VK + I +I
Sbjct: 427 ALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDI-VVTNALI 485
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
D+ ++ G +++A+ + M D + W ++S +HG
Sbjct: 486 DMYAKCGSIKDARLVFDLMN-KQDEVSWNAMISGYSMHG 523
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 215/437 (49%), Gaps = 42/437 (9%)
Query: 32 MLKDGLGNLSRITFSTMLIMSSSRRCVD-----LGRQIHGHILKFGFGSYVFVGSPLVDM 86
+ ++ +G++S F++ ++ + C+ G+ +H ILK G +F + L++M
Sbjct: 23 LTQEFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNM 82
Query: 87 YAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMI 146
Y K + DA + FDE M ++++IS+ T+I
Sbjct: 83 YVKSDFLCDASKLFDE-------------------------------MPERNTISFVTLI 111
Query: 147 TGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHK 206
G ++ EAI+LF + EG ++ F F ++L + E G IHA I + H+
Sbjct: 112 QGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHE 171
Query: 207 DNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM 266
N FVG+AL+D Y C + A VF + +K++VSWT M+ + +N C +EA+K+F M
Sbjct: 172 SNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQM 231
Query: 267 QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
+ G +P++FT SV +C L + + G HG +L + + V AL+ Y K G+I
Sbjct: 232 RMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDI 291
Query: 327 EDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSAC 386
+D+ F E+ +D + W+ +++ YA+ ++ E +++F +M + P++ T VL AC
Sbjct: 292 DDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQAC 351
Query: 387 SRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIG 446
+ + G V + G+ ++D+ ++ GR+E + + P D
Sbjct: 352 ATMEGLNLGNQ-IHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTP 410
Query: 447 WATLLSSCRIHGNVEIG 463
W T+ I G+V++G
Sbjct: 411 WNTV-----IVGHVQLG 422
>gi|414591609|tpg|DAA42180.1| TPA: hypothetical protein ZEAMMB73_073969 [Zea mays]
Length = 696
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 248/644 (38%), Positives = 365/644 (56%), Gaps = 35/644 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITF-STMLIMSSSRRCVDLGRQIH 65
VS+ ISG A H A+ + ML+ GL + TF S +S+ G Q+H
Sbjct: 85 VSYTAFISGAAQHARPLQALSAFAAMLRLGL-RPNDFTFPSAFKAAASAPPRSAAGTQLH 143
Query: 66 GHILKFGF-GSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
L+FG+ FV +DMY K G + A
Sbjct: 144 ALALRFGYLPDDAFVSCAALDMYFKTGCLALA---------------------------- 175
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
RRLF M +++ ++W ++T + +G E ++ + +R G + + + AC
Sbjct: 176 ---RRLFDEMPNRNVVAWNAVMTNAVLDGRPLETVEAYFGLRGAGGMPNVVSVCAFFNAC 232
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G+ L G+Q + F+ + +V V +++VD Y KC+ + A +VF M +N VSW
Sbjct: 233 AGMTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWC 292
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
+M+V Y QNG EEA ++ +R G EP DF + SV+++CA L L+ G H ++ +
Sbjct: 293 SMVVAYAQNGAEEEAFFVYLGARRAGEEPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRS 352
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
+ S I V++ALV YGKCG IED+ ++F EM R+ V+W A++ GYA G A+ + +F
Sbjct: 353 CIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRNLVTWNAMIGGYAHIGDAHNALSVF 412
Query: 365 EKM-LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
+KM + P+ +TL+ VL+ACSR GL ++G F+ M +GI P +HY C++D+L
Sbjct: 413 DKMIMGQETAPNYITLVNVLTACSRGGLTKEGYELFQTMKWRFGIEPRIEHYACVVDLLC 472
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
RAG E A I MP P W LL C++HG E+G+ AAE L ELDP + ++VL
Sbjct: 473 RAGMEERAYKIIQGMPMRPSISVWGALLGGCKMHGKTELGRIAAEKLFELDPQDSGNHVL 532
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LS++ AS G+W + +R+ M+ G++KDPG SWI +K+ VH+F A D + + +I A
Sbjct: 533 LSNMLASAGRWAEATDVRKEMKNVGIKKDPGRSWITWKNVVHVFQAKDTTHDMNREIQAL 592
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
L KL +M GY+PD L+D+E EK + HSEKLA+AFGL+ IPPG+PIR++KN
Sbjct: 593 LAKLKGQMQAAGYMPDTQYALYDLEEEEKESEVFQHSEKLALAFGLICIPPGIPIRIMKN 652
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LR+C DCH A K+IS I REI+VRD FH FKN ECSC D+W
Sbjct: 653 LRICVDCHRAFKFISGIAGREIIVRDNNMFHHFKNYECSCKDYW 696
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 165/359 (45%), Gaps = 35/359 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+WN +++ G + V+ Y L+ G + ++ + + L
Sbjct: 182 MPNRNVVAWNAVMTNAVLDGRPLETVEAY-FGLRGAGGMPNVVSVCAFFNACAGMTNLSL 240
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q +G + K GFG V V + +VD Y K
Sbjct: 241 GEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRC---------------------------- 272
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
V ++R +F GM ++++SW +M+ QNG E EA ++ R G F SV
Sbjct: 273 ---VGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAGEEPTDFMVSSV 329
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LT C GLL L+ G+ +HA +R+ N+FV SALVDMY KC I+ AE VF M +N+
Sbjct: 330 LTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRNL 389
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQ-FH 298
V+W AM+ GY G + A+ +F M P+ TL +V+++C+ +EG + F
Sbjct: 390 VTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRGGLTKEGYELFQ 449
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGK 356
G+ I +V + G E ++++ M +R +S W AL+ G GK
Sbjct: 450 TMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWGALLGGCKMHGK 508
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 2/197 (1%)
Query: 210 FVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN 269
F+ + LV++Y K A + VVS+TA + G Q+ +A+ F M R
Sbjct: 54 FLCAHLVNLYSKLDLPGAAAASLAADPSPTVVSYTAFISGAAQHARPLQALSAFAAMLRL 113
Query: 270 GIEPDDFTLGSVIS-SCANLASLEEGTQFHGRSLVTG-LISFITVSNALVTFYGKCGNIE 327
G+ P+DFT S + + GTQ H +L G L VS A + Y K G +
Sbjct: 114 GLRPNDFTFPSAFKAAASAPPRSAAGTQLHALALRFGYLPDDAFVSCAALDMYFKTGCLA 173
Query: 328 DSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS 387
+ RLF+EM R+ V+W A+++ G+ ET++ + + G P+ V++ +AC+
Sbjct: 174 LARRLFDEMPNRNVVAWNAVMTNAVLDGRPLETVEAYFGLRGAGGMPNVVSVCAFFNACA 233
Query: 388 RAGLVEKGRHYFEIMVK 404
+ G ++ + K
Sbjct: 234 GMTNLSLGEQFYGFVAK 250
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 237/611 (38%), Positives = 358/611 (58%), Gaps = 33/611 (5%)
Query: 37 LGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDA 96
L R+ S + + S+ D R+IH H+ F F+ + L+ MY K + DA
Sbjct: 47 LAPTPRVYRSFITACAQSKNLED-ARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDA 105
Query: 97 KRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLER 156
+ FD+ M+ KD +SWT++I G QN +
Sbjct: 106 RNVFDQ-------------------------------MRRKDMVSWTSLIAGYAQNDMPV 134
Query: 157 EAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALV 216
EAI L M + FTF S+L A G G+QIHA ++ ++V+VGSAL+
Sbjct: 135 EAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALL 194
Query: 217 DMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDF 276
DMY +C + A +VF + KN VSW A++ G+ + G E A+ F M RNG E F
Sbjct: 195 DMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHF 254
Query: 277 TLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
T SV SS A L +LE+G H + + V N L+ Y K G++ D+ ++F+ +
Sbjct: 255 TYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRV 314
Query: 337 NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR 396
+ +D V+W ++++ +A++G E + FE+M G+ +++T + +L+ACS GLV++G+
Sbjct: 315 DNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGK 374
Query: 397 HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRI 456
YFE+M KEY + P DHY ++ +L RAG L A FI KMP P A W LL++CR+
Sbjct: 375 RYFEMM-KEYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRM 433
Query: 457 HGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCS 516
H N ++G++AA+ + ELDP + VLL +IYAS G+WD +++R M+ GV+K+P CS
Sbjct: 434 HKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRMMMKTTGVKKEPACS 493
Query: 517 WIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKML 576
W++ ++ VH+F A+D + P +++IY ++++K+ KEGYVPDM VL V+ EK L
Sbjct: 494 WVEMENSVHMFVANDDTHPQAEEIYKMWGEISKKIRKEGYVPDMDYVLLHVDDQEKEANL 553
Query: 577 NHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLF 636
+HSEKLA+AF L+ +P G IR++KN+R+C DCH+A KYISK+ REI+VRD RFH F
Sbjct: 554 QYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNRFHHF 613
Query: 637 KNGECSCGDFW 647
+G CSCGD+W
Sbjct: 614 SSGSCSCGDYW 624
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 153/293 (52%), Gaps = 32/293 (10%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW LI+G+A + +A+ + MLK G + TF+++L + + GRQI
Sbjct: 116 DMVSWTSLIAGYAQNDMPVEAIGLLPGMLK-GRFKPNGFTFASLLKAAGAYADSGTGRQI 174
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +K G+ V+VGS L+DMYA+ G + A FD+L KN V +N +I+G R+G
Sbjct: 175 HALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKG-- 232
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
D +S A+ F EM G FT+ SV ++
Sbjct: 233 -----------DGES------------------ALMTFAEMLRNGFEATHFTYSSVFSSI 263
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L ALE+GK +HA +I++ K FVG+ L+DMY K S+ A VF + K++V+W
Sbjct: 264 ARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWN 323
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
+ML + Q G +EAV F M+++G+ + T ++++C++ ++EG ++
Sbjct: 324 SMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRY 376
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 117/248 (47%), Gaps = 37/248 (14%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
+GVSWN LISG A G A+ + ML++G + T+S++ + ++ G+ +
Sbjct: 217 NGVSWNALISGFARKGDGESALMTFAEMLRNGF-EATHFTYSSVFSSIARLGALEQGKWV 275
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H H++K FVG+ L+DMYAK G + DA++ FD + K++V +N+M+T
Sbjct: 276 HAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLT-------- 327
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
Q GL +EA+ F EMR G+ ++Q TF +LTAC
Sbjct: 328 -----------------------AFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTAC 364
Query: 185 --GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAES-VFRTMAWKNVV 241
GGL ++EGK+ + D + + +V + + + YA +F+
Sbjct: 365 SHGGL--VKEGKRYFEMMKEYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAA 422
Query: 242 SWTAMLVG 249
W A+L
Sbjct: 423 VWGALLAA 430
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 242/642 (37%), Positives = 362/642 (56%), Gaps = 38/642 (5%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDG-LGNLSRITFSTMLIMSSSRRCVD--LGRQIH 65
WN +I G S +DA+ +Y M G L N F+ ++ + R +D LG +IH
Sbjct: 82 WNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPN----NFTIPFVLKACARKLDVRLGLKIH 137
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
++K G+ VFV + L+ +Y K DA + FD++P+KN+
Sbjct: 138 SLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNV----------------- 180
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
+SWT +ITG + +G REAI F+++ GL D F+ VL AC
Sbjct: 181 --------------VSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACA 226
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
L G+ I +I + NVFV ++L+DMY KC +++ A +F M K++VSW+
Sbjct: 227 RLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWST 286
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
M+ GY NG ++A+ +F MQ ++PD +T+ V+S+CA L +L+ G
Sbjct: 287 MIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNE 346
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
+S + AL+ Y KCG++ + +F M +D V W A++ G + G A LF
Sbjct: 347 FLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFS 406
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
+ HG++PDE T IG+L C+ G V +GR +F M + + + P +HY CM+D+L RA
Sbjct: 407 LVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRA 466
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
G L EA IN MP P+A+ W LL C++H + + + + L+EL+P+N +YV LS
Sbjct: 467 GLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLS 526
Query: 486 SIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELE 545
+IY+ +W+ ++R TM+E+ ++K CSWI+ VH F D S S++IYA+L+
Sbjct: 527 NIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLD 586
Query: 546 KLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
+L R++ G+VP VL D+E EK L +HSEKLA+AFGL+ PP IRVVKNLR
Sbjct: 587 ELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLR 646
Query: 606 VCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VC DCH+A K ISKIT+REI++RD RFH F +G CSC D+W
Sbjct: 647 VCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 191/358 (53%), Gaps = 4/358 (1%)
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
+++ + N ++ L G S+ +F +K+ + W TMI GL+ +AI L+
Sbjct: 45 DQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGS 104
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
MR G + FT VL AC L + G +IH+ +++ + +VFV ++L+ +Y KC +
Sbjct: 105 MRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDN 164
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
A VF + KNVVSWTA++ GY +G EA+ F + G++PD F+L V+++
Sbjct: 165 FDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAA 224
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
CA L G +G+ + V+ +L+ Y KCGN+E ++ +F+ M +D VSW
Sbjct: 225 CARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSW 284
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
+ ++ GYA G + +DLF +M S LKPD T++GVLSAC+ G ++ G +M +
Sbjct: 285 STMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDR 344
Query: 405 -EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
E+ P+ T +ID+ S+ G + +A M D + W ++ ++G+ +
Sbjct: 345 NEFLSNPVLG--TALIDMYSKCGSVTQAWEIFTAMK-RKDRVVWNAMMVGLSMNGHAK 399
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 175/354 (49%), Gaps = 38/354 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + VSW +I+G+ S G +A+ + +L+ GL S FS + ++++ R D
Sbjct: 175 IPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDS---FSLVKVLAACARLGDC 231
Query: 61 --GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G I +I G G VFV + L+DMY K G + A F +PEK+IV ++TMI G
Sbjct: 232 TSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGY 291
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
G L ++A+DLF +M+ E L D +T
Sbjct: 292 AFNG-------------------------------LPQQALDLFFQMQSENLKPDCYTMV 320
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
VL+AC L AL+ G + + RN+ N +G+AL+DMY KC S+ A +F M K
Sbjct: 321 GVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRK 380
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-F 297
+ V W AM+VG NG ++ +F ++++GI PD+ T ++ C + + EG Q F
Sbjct: 381 DRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFF 440
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
+ V L I +V G+ G + ++H+L N M ++ + V W AL+ G
Sbjct: 441 NNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGG 494
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/650 (36%), Positives = 380/650 (58%), Gaps = 38/650 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSWN L+SG + DA+ + M ++ ++ S + ++++S R +L
Sbjct: 309 MLCRDYVSWNTLLSGLVQNELYRDALNYFRDM-QNSAQKPDQV--SVLNLIAASGRSGNL 365
Query: 61 --GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G+++H + ++ G S + +G+ L+DMYAK + F+
Sbjct: 366 LNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFE----------------- 408
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
M +KD ISWTT+I G QN EAI+LFR+++++G+ +D G
Sbjct: 409 --------------CMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIG 454
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
SVL AC GL + ++IH ++ + D D + + +A+V++Y + YA F ++ K
Sbjct: 455 SVLRACSGLKSRNFIREIHGYVFKRDLAD-IMLQNAIVNVYGEVGHRDYARRAFESIRSK 513
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
++VSWT+M+ NG EA+++F ++++ I+PD + S +S+ ANL+SL++G + H
Sbjct: 514 DIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIH 573
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G + G ++++LV Y CG +E+S ++F+ + RD + WT++++ G N
Sbjct: 574 GFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGN 633
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
E I LF+KM + PD +T + +L ACS +GL+ +G+ +FEIM Y + P +HY CM
Sbjct: 634 EAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACM 693
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
+D+LSR+ LEEA F+ MP P + W LL +C IH N E+G+ AA+ LL+ D N
Sbjct: 694 VDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSDTKNS 753
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
Y L+S+I+A+ G+W+ V ++R M+ G++K+PGCSWI+ +++H F A D S P +D
Sbjct: 754 GKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTD 813
Query: 539 QIYAELEKLNRKMIKE-GYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
IY +L + + + K+ GY+ V H+V EK +ML HSE+LA+ +GLL P G
Sbjct: 814 DIYLKLAQFTKLLGKKGGYIAQTKFVFHNVSEEEKTQMLYRHSERLALGYGLLVTPKGTS 873
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
IR+ KNLR+C DCH K S+++QR ++VRDA RFH F+ G CSCGDFW
Sbjct: 874 IRITKNLRICDDCHTFFKIASEVSQRALVVRDANRFHHFERGLCSCGDFW 923
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 135/460 (29%), Positives = 232/460 (50%), Gaps = 39/460 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSWN +IS H + G +A+ ++ M + G+ + + TF L V L
Sbjct: 208 MEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVAS-NTYTFVAALQGVEDPSFVKL 266
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G IHG LK + V+V + L+ MYAK G + DA+R F + ++ V +NT+++GL+
Sbjct: 267 GMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLV- 325
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
QN L R+A++ FR+M+ DQ + ++
Sbjct: 326 ------------------------------QNELYRDALNYFRDMQNSAQKPDQVSVLNL 355
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ A G L GK++HA+ IRN N+ +G+ L+DMY KC +K+ F M K++
Sbjct: 356 IAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDL 415
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SWT ++ GY QN C EA+ +F +Q G++ D +GSV+ +C+ L S + HG
Sbjct: 416 ISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGY 475
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
L I + NA+V YG+ G+ + + R F + +D VSWT++++ G E
Sbjct: 476 VFKRDLAD-IMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEA 534
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR--HYFEIMVKEYGIRPIHDHYTCM 418
++LF + ++PD + +I LSA + ++KG+ H F I + PI + +
Sbjct: 535 LELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPI---ASSL 591
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+D+ + G +E ++ + + D I W +++++ +HG
Sbjct: 592 VDMYACCGTVENSRKMFHSVK-QRDLILWTSMINANGMHG 630
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 136/513 (26%), Positives = 245/513 (47%), Gaps = 63/513 (12%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
+WN ++ S G +A+++Y M G+ + TF ++L + LG +IHG
Sbjct: 112 TWNAMMGAFVSSGKYLEAIELYKEMRVLGVA-IDACTFPSVLKACGALGESRLGAEIHGV 170
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
+K GFG +VFV + L+ MY K G + A+ FD G++
Sbjct: 171 AVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFD---------------GIM-------- 207
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
M+ +D++SW ++I+ + G EA+ LFR M+ G+A + +TF + L
Sbjct: 208 ------MEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDP 261
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
++ G IH ++++H +V+V +AL+ MY KC ++ AE VF +M ++ VSW +L
Sbjct: 262 SFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLL 321
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
G QN +A+ F +MQ + +PD ++ ++I++ +L G + H ++ GL
Sbjct: 322 SGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLD 381
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
S + + N L+ Y KC ++ F M+ +D +SWT +++GYA+ E I+LF K+
Sbjct: 382 SNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKV 441
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY-----------T 416
G+ D + + VL ACS GL K R++ IR IH +
Sbjct: 442 QVKGMDVDPMMIGSVLRACS--GL--KSRNF---------IREIHGYVFKRDLADIMLQN 488
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY 476
++++ G + A+ + D + W ++++ C +H + + L+
Sbjct: 489 AIVNVYGEVGHRDYARRAFESIR-SKDIVSWTSMITCC-VHNGLPVEALELFYSLKQTNI 546
Query: 477 NPASYVLLSSIYAS-------KGKWDHVSQLRR 502
P S ++S++ A+ KGK H +R+
Sbjct: 547 QPDSIAIISALSATANLSSLKKGKEIHGFLIRK 579
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 195/394 (49%), Gaps = 42/394 (10%)
Query: 20 GSVNDAVKVYNLMLKDGLGNLSRI--TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYV 77
G++N A + L+ L SR+ S +L + + + + G+Q+H +LK +
Sbjct: 22 GTLNPAFQSLTLLSTHPLATPSRLEHAHSLLLDLCVAVKALPQGQQLHARLLKSHLSA-- 79
Query: 78 FVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDK 137
F+ + L+ MY K G + DA + FDE+ E+ I
Sbjct: 80 FLATKLLHMYEKCGSLKDAVKVFDEMTERTI----------------------------- 110
Query: 138 DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIH 197
+W M+ + +G EAI+L++EMR+ G+A+D TF SVL ACG L G +IH
Sbjct: 111 --FTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIH 168
Query: 198 AFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR--TMAWKNVVSWTAMLVGYGQNGC 255
++ + VFV +AL+ MY KC + A +F M ++ VSW +++ + G
Sbjct: 169 GVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGK 228
Query: 256 SEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNA 315
EA+ +F MQ G+ + +T + + + + ++ G HG +L + + + V+NA
Sbjct: 229 CLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANA 288
Query: 316 LVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPD 375
L+ Y KCG +ED+ R+F M RD VSW L+SG + + ++ F M + KPD
Sbjct: 289 LIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPD 348
Query: 376 EVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
+V+++ +++A R+G + G+ V Y IR
Sbjct: 349 QVSVLNLIAASGRSGNLLNGKE-----VHAYAIR 377
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 152/316 (48%), Gaps = 8/316 (2%)
Query: 139 SISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHA 198
SIS T+ G + + ++ L L + + +L C + AL +G+Q+HA
Sbjct: 13 SISVNTLNKGTLNPAFQ--SLTLLSTHPLATPSRLEHAHSLLLDLCVAVKALPQGQQLHA 70
Query: 199 FIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEE 258
++++ + F+ + L+ MY KC S+K A VF M + + +W AM+ + +G E
Sbjct: 71 RLLKSHL--SAFLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLE 128
Query: 259 AVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVT 318
A++++ M+ G+ D T SV+ +C L G + HG ++ G F+ V NAL+
Sbjct: 129 AIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIA 188
Query: 319 FYGKCGNIEDSHRLFN--EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDE 376
YGKCG++ + LF+ M D VSW +++S + GK E + LF +M G+ +
Sbjct: 189 MYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNT 248
Query: 377 VTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFIN 436
T + L V+ G +K ++ +I + ++ GR+E+A+
Sbjct: 249 YTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYV-ANALIAMYAKCGRMEDAERVFA 307
Query: 437 KMPFPPDAIGWATLLS 452
M D + W TLLS
Sbjct: 308 SM-LCRDYVSWNTLLS 322
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 234/679 (34%), Positives = 389/679 (57%), Gaps = 75/679 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN++IS + G V +A+ + M G+ S T+++ L + ++
Sbjct: 251 MPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDS-TTYTSSLTACARLSSLEW 309
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H +++ +V S +V++YAK G
Sbjct: 310 GKQLHVQVIRNLPHIDPYVASAMVELYAKCGCF--------------------------- 342
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+E++R+F ++D++S+SWT +I G +Q G E+++LF +MR E +A+DQF ++
Sbjct: 343 ----KEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATL 398
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
++ C + + G Q+H+ +++ H V V ++L+ MY KC +++ AE +F MA +++
Sbjct: 399 ISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDI 458
Query: 241 VSWTAMLVGYGQ-------------------------------NGCSEEAVKIFCNM-QR 268
VSWT M+ Y Q +G E+ +K++ +M
Sbjct: 459 VSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTE 518
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIED 328
+ PD T ++ CA++ + + G Q G ++ GLI +V NA++T Y KCG I +
Sbjct: 519 KDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISE 578
Query: 329 SHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
+ + F+ ++ +D VSW A+++GY++ G + I++F+ +L+ G KPD ++ + VLS CS
Sbjct: 579 ARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSH 638
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
+GLVE+G+ YF++M +++ I P +H++CM+D+L RAG L EAK+ I++MP P A W
Sbjct: 639 SGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWG 698
Query: 449 TLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
LLS+C+ HGN ++ + AA+ L +LD Y+LL+ +YA GK D +Q+R+ MR+KG
Sbjct: 699 ALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMRDKG 758
Query: 509 VRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVE 568
++K PG SW++ +RVH+F A+D S P I +L++L K+ GYV
Sbjct: 759 IKKSPGYSWMEVNNRVHVFKAEDVSHPQVIAIREKLDELMEKIAHLGYVR---------- 808
Query: 569 LSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVR 628
+E + HHSEKLA+AFG++ +P +PI ++KNLR+C DCH K IS +T RE ++R
Sbjct: 809 -TESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICDDCHTVIKLISTVTDREFVIR 867
Query: 629 DAVRFHLFKNGECSCGDFW 647
D VRFH FK G CSC D+W
Sbjct: 868 DGVRFHHFKGGSCSCMDYW 886
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 146/500 (29%), Positives = 249/500 (49%), Gaps = 37/500 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SWN ++SG+ G +A+ ++ M + G + TF ++ + ++
Sbjct: 118 MPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEV 177
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
Q+ G + KF V + LVDM + G + A + F + I+ N+M+ G +
Sbjct: 178 ALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAK 237
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
V+ + +F+ M ++D +SW +I+ L ++G REA+D+ +M +G+ D T+ S
Sbjct: 238 SHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSS 297
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LTAC L +LE GKQ+H +IRN + +V SA+V++Y KC K A+ VF ++ +N
Sbjct: 298 LTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNS 357
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWT ++ G+ Q GC E+V++F M+ + D F L ++IS C N + G+Q H
Sbjct: 358 VSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSL 417
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
L +G + VSN+L++ Y KCGN++++ +FN M RD VSWT +++ Y++ G +
Sbjct: 418 CLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKA 477
Query: 361 IDLFEKM---------------LSHGLK-----------------PDEVTLIGVLSACSR 388
+ F+ M + HG + PD VT + + C+
Sbjct: 478 REFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCAD 537
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
G + G VK G+ +I + S+ GR+ EA+ + + D + W
Sbjct: 538 IGANKLGDQIIGHTVK-VGLILDTSVVNAVITMYSKCGRISEARKAFDFLS-RKDLVSWN 595
Query: 449 TLLSSCRIHGNVEIGKWAAE 468
+++ HG +GK A E
Sbjct: 596 AMITGYSQHG---MGKQAIE 612
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 141/546 (25%), Positives = 257/546 (47%), Gaps = 55/546 (10%)
Query: 54 SRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF-DELPEKNIVMYN 112
+R + R +H ++ G S VF+ + L+ Y G + DA+ DE+ E N++ +N
Sbjct: 37 ARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPNVITHN 96
Query: 113 TMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM 172
M+ G + G + ++ LF M +D SW T+++G Q+G A+D+F MR G ++
Sbjct: 97 IMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSL 156
Query: 173 -DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE-- 229
+ FTFG V+ +CG L E Q+ + + D +D+ V +ALVDM +C ++ +A
Sbjct: 157 PNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQ 216
Query: 230 -----------------------------SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAV 260
+F++M ++VVSW ++ ++G EA+
Sbjct: 217 FSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREAL 276
Query: 261 KIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFY 320
+ +M G+ PD T S +++CA L+SLE G Q H + + V++A+V Y
Sbjct: 277 DMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELY 336
Query: 321 GKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLI 380
KCG +++ R+F+ + R+ VSWT L+ G+ ++G +E+++LF +M + + D+ L
Sbjct: 337 AKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALA 396
Query: 381 GVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF 440
++S C + G + +K R + + +I + ++ G L+ A+ N M
Sbjct: 397 TLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNS-LISMYAKCGNLQNAELIFNFMA- 454
Query: 441 PPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKG-KWDHVSQ 499
D + W ++++ GN+ + E ++ N ++ + Y G + D +
Sbjct: 455 ERDIVSWTGMITAYSQVGNIAKAR---EFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKM 511
Query: 500 LRRTMREKGVRKDPGCSWIKYKSRVHIF--SADDWSSPYSDQIYAELEKLNRKMIKEGYV 557
+ EK V D W+ Y V +F AD ++ DQI +K G +
Sbjct: 512 YSDMLTEKDVIPD----WVTY---VTLFRGCADIGANKLGDQIIGH-------TVKVGLI 557
Query: 558 PDMSSV 563
D S V
Sbjct: 558 LDTSVV 563
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 155/377 (41%), Gaps = 74/377 (19%)
Query: 176 TFGSVLTACGGLLALEEGKQIHAFII---------------------------RNDHKD- 207
L +CG AL + +H+ +I RN +D
Sbjct: 27 ALADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDE 86
Query: 208 ----NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIF 263
NV + +++ Y K S+ A +F M ++V SW ++ GY Q+G A+ IF
Sbjct: 87 ITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIF 146
Query: 264 CNMQRNGIE-PDDFTLGSVISSCANLASLEEGTQFHG--------------RSLVTGLI- 307
+M++ G P+ FT G V+ SC L E Q G +LV L+
Sbjct: 147 VSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVR 206
Query: 308 ----------------SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
I N+++ Y K ++ + +F M RD VSW ++S
Sbjct: 207 CGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISAL 266
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
+K G+ E +D+ M G++PD T L+AC+R +E G+ +++ P
Sbjct: 267 SKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNL---PH 323
Query: 412 HDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG----NVEIGKW 465
D Y + M+++ ++ G +EAK + + +++ W L+ +G +VE+
Sbjct: 324 IDPYVASAMVELYAKCGCFKEAKRVFSSLR-DRNSVSWTVLIGGFLQYGCFSESVELFNQ 382
Query: 466 AAESLLELDPYNPASYV 482
L+ +D + A+ +
Sbjct: 383 MRAELMAVDQFALATLI 399
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 100/269 (37%), Gaps = 38/269 (14%)
Query: 277 TLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH------ 330
L + SC ++L H R + GL S + + N L+ Y CG + D+
Sbjct: 27 ALADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDE 86
Query: 331 --------------------------RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
LF M RD SW ++SGY + G+ +D+F
Sbjct: 87 ITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIF 146
Query: 365 EKMLSHGLK-PDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
M G P+ T V+ +C G E ++ K + + D T ++D+L
Sbjct: 147 VSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSK-FDSQDDPDVQTALVDMLV 205
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
R G ++ A +++ P + L+ + HG A E + + S+ +
Sbjct: 206 RCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGV----DHALEIFKSMPERDVVSWNM 261
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKD 512
+ S + G+ + M KGVR D
Sbjct: 262 VISALSKSGRVREALDMVVDMHGKGVRPD 290
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 242/642 (37%), Positives = 362/642 (56%), Gaps = 38/642 (5%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDG-LGNLSRITFSTMLIMSSSRRCVD--LGRQIH 65
WN +I G S +DA+ +Y M G L N F+ ++ + R +D LG +IH
Sbjct: 82 WNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPN----NFTIPFVLKACARKLDVRLGLKIH 137
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
++K G+ VFV + L+ +Y K DA + FD++P+KN+
Sbjct: 138 SLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNV----------------- 180
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
+SWT +ITG + +G REAI F+++ GL D F+ VL AC
Sbjct: 181 --------------VSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACA 226
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
L G+ I +I + NVFV ++L+DMY KC +++ A +F M K++VSW+
Sbjct: 227 RLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWST 286
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
M+ GY NG ++A+ +F MQ ++PD +T+ V+S+CA L +L+ G
Sbjct: 287 MIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNE 346
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
+S + AL+ Y KCG++ + +F M +D V W A++ G + G A LF
Sbjct: 347 FLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFS 406
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
+ HG++PDE T IG+L C+ G V +GR +F M + + + P +HY CM+D+L RA
Sbjct: 407 LVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRA 466
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
G L EA IN MP P+A+ W LL C++H + + + + L+EL+P+N +YV LS
Sbjct: 467 GLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLS 526
Query: 486 SIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELE 545
+IY+ +W+ ++R TM+E+ ++K CSWI+ VH F D S S++IYA+L+
Sbjct: 527 NIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLD 586
Query: 546 KLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
+L R++ G+VP VL D+E EK L +HSEKLA+AFGL+ PP IRVVKNLR
Sbjct: 587 ELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLR 646
Query: 606 VCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VC DCH+A K ISKIT+REI++RD RFH F +G CSC D+W
Sbjct: 647 VCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 191/358 (53%), Gaps = 4/358 (1%)
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
+++ + N ++ L G S+ +F +K+ + W TMI GL+ +AI L+
Sbjct: 45 DQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGS 104
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
MR G + FT VL AC L + G +IH+ +++ + +VFV ++L+ +Y KC +
Sbjct: 105 MRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDN 164
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
A VF + KNVVSWTA++ GY +G EA+ F + G++PD F+L V+++
Sbjct: 165 FDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAA 224
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
CA L G +G+ + V+ +L+ Y KCGN+E ++ +F+ M +D VSW
Sbjct: 225 CARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSW 284
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
+ ++ GYA G + +DLF +M S LKPD T++GVLSAC+ G ++ G +M +
Sbjct: 285 STMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDR 344
Query: 405 -EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
E+ P+ T +ID+ S+ G + +A M D + W ++ ++G+ +
Sbjct: 345 NEFLSNPVLG--TALIDMYSKCGSVTQAWEIFTAMK-KKDRVVWNAMMVGLSMNGHAK 399
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 175/354 (49%), Gaps = 38/354 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + VSW +I+G+ S G +A+ + +L+ GL S FS + ++++ R D
Sbjct: 175 IPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDS---FSLVKVLAACARLGDC 231
Query: 61 --GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G I +I G G VFV + L+DMY K G + A F +PEK+IV ++TMI G
Sbjct: 232 TSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGY 291
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
G L ++A+DLF +M+ E L D +T
Sbjct: 292 AFNG-------------------------------LPQQALDLFFQMQSENLKPDCYTMV 320
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
VL+AC L AL+ G + + RN+ N +G+AL+DMY KC S+ A +F M K
Sbjct: 321 GVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKK 380
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-F 297
+ V W AM+VG NG ++ +F ++++GI PD+ T ++ C + + EG Q F
Sbjct: 381 DRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFF 440
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
+ V L I +V G+ G + ++H+L N M ++ + V W AL+ G
Sbjct: 441 NNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGG 494
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 237/605 (39%), Positives = 366/605 (60%), Gaps = 37/605 (6%)
Query: 43 ITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDE 102
IT+S ++ S+R V G+++H HI G+ +FV + L++MY K L+
Sbjct: 56 ITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLL--------- 106
Query: 103 LPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLF 162
EE+ LF M +++ +SWTTMI+ N L +A+
Sbjct: 107 ----------------------EEAEDLFDEMPERNVVSWTTMISAY-SNKLNDKALKCL 143
Query: 163 REMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC 222
M EG+ + FT+ SVL AC GL L +Q+H II+ + +VFV SAL+D+Y K
Sbjct: 144 ILMFREGVRPNMFTYSSVLRACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKW 200
Query: 223 KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
+ A VF M +++V W +++ G+ QN EA+ +F M+R G D TL SV+
Sbjct: 201 SDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVL 260
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
+C LA LE G Q H V + ++NAL+ Y KCG++ED++ F+ M +D +
Sbjct: 261 RACTGLALLELGRQVHVH--VLKFDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVI 318
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
SW+ +V+G A+ G + + ++LFE M G +P+ +T++GVL ACS AGLVEKG +YF M
Sbjct: 319 SWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSM 378
Query: 403 VKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
K +G+ P +HY C+ID+L RAGRL+EA I++M PD++ W TLL +CR+H NV++
Sbjct: 379 KKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDL 438
Query: 463 GKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKS 522
+AA+ ++EL+P + +Y+LLS+IYA+ +W+ V+++R+TM +G+RK PGCSWI+
Sbjct: 439 AIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDK 498
Query: 523 RVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEK 582
++H+F D S P ++I L L +++ GYVPD + VL D+E +K L +HSEK
Sbjct: 499 QIHVFILGDTSHPKIEEIVQRLNDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRYHSEK 558
Query: 583 LAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECS 642
LAI FGL+ + +R+ KNLR+C DCH K +S++ R I++RD +R+H F++G CS
Sbjct: 559 LAIMFGLMNLSREKTVRIRKNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCS 618
Query: 643 CGDFW 647
CGD+W
Sbjct: 619 CGDYW 623
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 113/355 (31%), Positives = 189/355 (53%), Gaps = 46/355 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVND-AVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
MP + VSW +IS +++ +ND A+K LM ++G+ + T+S++L R C
Sbjct: 116 MPERNVVSWTTMISAYSN--KLNDKALKCLILMFREGV-RPNMFTYSSVL-----RACDG 167
Query: 60 LG--RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
L RQ+H I+K G S VFV S L+D+Y+K + +A FDE+P +++V++N++I
Sbjct: 168 LPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSII-- 225
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
G QN EA++LF+ M+ G DQ T
Sbjct: 226 -----------------------------GGFAQNSDGNEALNLFKRMKRAGFLADQATL 256
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
SVL AC GL LE G+Q+H +++ D ++ + +AL+DMYCKC S++ A S F M
Sbjct: 257 TSVLRACTGLALLELGRQVHVHVLKFDQ--DLILNNALIDMYCKCGSLEDANSAFSRMVE 314
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQ 296
K+V+SW+ M+ G QNG S +A+++F +M+ +G P+ T+ V+ +C++ +E+G
Sbjct: 315 KDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYY 374
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
F + G+ L+ G+ G ++++ +L +EM D V+W L+
Sbjct: 375 FRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGA 429
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 166/305 (54%), Gaps = 14/305 (4%)
Query: 160 DLFREMRL------EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGS 213
DL R MR G+ D T+ ++ C A++EGK++H I ++ +FV +
Sbjct: 35 DLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVN 94
Query: 214 ALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEP 273
L++MY K ++ AE +F M +NVVSWT M+ Y N +++A+K M R G+ P
Sbjct: 95 TLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYS-NKLNDKALKCLILMFREGVRP 153
Query: 274 DDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLF 333
+ FT SV+ +C L +L Q H + TGL S + V +AL+ Y K +++++ +F
Sbjct: 154 NMFTYSSVLRACDGLPNLR---QLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVF 210
Query: 334 NEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVE 393
+EM RD V W +++ G+A+ NE ++LF++M G D+ TL VL AC+ L+E
Sbjct: 211 DEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLE 270
Query: 394 KGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
GR + V ++ I ++ +ID+ + G LE+A S ++M D I W+T+++
Sbjct: 271 LGRQ-VHVHVLKFDQDLILNN--ALIDMYCKCGSLEDANSAFSRM-VEKDVISWSTMVAG 326
Query: 454 CRIHG 458
+G
Sbjct: 327 LAQNG 331
>gi|218193985|gb|EEC76412.1| hypothetical protein OsI_14066 [Oryza sativa Indica Group]
Length = 628
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/558 (40%), Positives = 347/558 (62%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
RQ+H G + F + L+ YA LG + A+ F+ +P +N++ +N + G ++
Sbjct: 61 RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKN 120
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G + +R+LF M +++ +W M+ GL G + E++ LF +MR EG+ D+F GSV
Sbjct: 121 GDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGLFLDMRREGMHPDEFGLGSVS 180
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
C GL + G+Q+HA+++R+ ++ VGS+L MY +C ++ E+V R + ++V
Sbjct: 181 RCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIV 240
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
S ++ G QNG SE A++ FC M+ G+ D T S ISSC++LA+L +G Q HG+
Sbjct: 241 SCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQV 300
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ G+ + V LV Y +CG + DS R+F D +A++S Y G + I
Sbjct: 301 MKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAI 360
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
+LF++M++ G +P +VT + +L ACS +GL E+G FE+M K YGI+P HYTC++D+
Sbjct: 361 ELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGIQPSVKHYTCVVDL 420
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
L R+G L+EA++ I MP PD + W TLLS+C+ N ++ + A+ ++ELDP++ ASY
Sbjct: 421 LGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASY 480
Query: 482 VLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIY 541
VLLS+I A+ +W VS++R+ MR+ VRK+PG SW++ K +H F D S P +I
Sbjct: 481 VLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEID 540
Query: 542 AELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVV 601
LE++ K+ + GY PDMS VLHD+E EK L+HHSEKLAIAF L +P G+PIRV+
Sbjct: 541 ECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVM 600
Query: 602 KNLRVCSDCHNATKYISK 619
KNLRVC DCH A K +S+
Sbjct: 601 KNLRVCDDCHLAIKLMSQ 618
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 176/407 (43%), Gaps = 67/407 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLM----------LKDGLGNLSRITFSTMLI 50
+P + +SWN+L G+ +G + A K+++ M + GL NL S L
Sbjct: 102 IPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGLF 161
Query: 51 M---------------SSSRRCVDL-----GRQIHGHILKFGFGSYVFVGSPLVDMYAKL 90
+ S SR C L GRQ+H ++++ G + VGS L MY +
Sbjct: 162 LDMRREGMHPDEFGLGSVSRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRC 221
Query: 91 GLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLM 150
G + + + LP +IV N T+I G
Sbjct: 222 GCLQEGEAVLRMLPSLSIVSCN-------------------------------TIIAGRT 250
Query: 151 QNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVF 210
QNG A++ F MR G+A D TF S +++C L AL +G+QIH +++ V
Sbjct: 251 QNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVP 310
Query: 211 VGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
V + LV MY +C + +E VF + +AM+ YG +G ++A+++F M G
Sbjct: 311 VMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGG 370
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQ-FHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
EP D T +++ +C++ EEG F + G+ + +V G+ G ++++
Sbjct: 371 AEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGIQPSVKHYTCVVDLLGRSGCLDEA 430
Query: 330 HRLFNEMNVR-DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPD 375
L M + D V W L+S K + D+ E++ ++ D
Sbjct: 431 EALILSMPLTPDGVIWKTLLSAC----KTQKNFDMAERIAKRVIELD 473
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 128/287 (44%), Gaps = 35/287 (12%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
F + AC L L +Q+HAF + + F + L+ Y + A +F +
Sbjct: 47 FSHLFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 103
Query: 237 WKNVVSWTAMLVGYGQN-------------------------------GCSEEAVKIFCN 265
+NV+SW + GY +N G EE++ +F +
Sbjct: 104 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGLFLD 163
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M+R G+ PD+F LGSV CA L + G Q H + +GL + V ++L Y +CG
Sbjct: 164 MRREGMHPDEFGLGSVSRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGC 223
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+++ + + VS +++G + G + ++ F M S G+ D VT + +S+
Sbjct: 224 LQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISS 283
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAK 432
CS + +G+ ++K G+ + TC++ + SR G L +++
Sbjct: 284 CSDLAALAQGQQIHGQVMKA-GVDKVVPVMTCLVHMYSRCGCLGDSE 329
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 145/365 (39%), Gaps = 71/365 (19%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P VS N +I+G +G A++ + +M G+ +TF + + S +
Sbjct: 234 LPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAA-DVVTFVSAISSCSDLAALAQ 292
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIHG ++K G V V + LV MY++ G + D
Sbjct: 293 GQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGD------------------------- 327
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
S R+F G D+ + MI+ +G ++AI+LF++M G TF ++
Sbjct: 328 ------SERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLAL 381
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC EEG + + Y S+K+
Sbjct: 382 LYACSHSGLKEEGMDCFELMTKT---------------YGIQPSVKH------------- 413
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+T ++ G++GC +EA + +M + PD +++S+C + + + R
Sbjct: 414 --YTCVVDLLGRSGCLDEAEALILSMP---LTPDGVIWKTLLSACKTQKNFDMAERIAKR 468
Query: 301 SLVTGL---ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE--VSWTALVSGYAKFG 355
+ S++ +SN T + G++ + + + NVR E VSW L +F
Sbjct: 469 VIELDPHDSASYVLLSNIRATSR-RWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFC 527
Query: 356 KANET 360
+E+
Sbjct: 528 TGDES 532
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/647 (36%), Positives = 380/647 (58%), Gaps = 34/647 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSWN +I G++ G +++K++ M+ +L +T +++L ++
Sbjct: 277 MVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDL--LTITSILQACGHLGDLEF 334
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +H +++ G+ + L++MYAK G N++
Sbjct: 335 GKYVHDYMITSGYECDTTASNILINMYAKCG---------------NLL----------- 368
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
S+ +F GMK KDS+SW +MI +QNG EA+ LF+ M+ + + D T+ +
Sbjct: 369 -----ASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTD-VKPDSVTYVML 422
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+ L L GK++H + + N+ V + LVDMY KC + + VF M +++
Sbjct: 423 LSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDI 482
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
++W ++ + +++ M+ G+ PD T+ S++ C+ LA+ +G + HG
Sbjct: 483 ITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGC 542
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
GL S + V N L+ Y KCG++ +S ++F M +D V+WTAL+S +G+ +
Sbjct: 543 IFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKA 602
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ F +M + G+ PD V + ++ ACS +GLVE+G +YF M K+Y I P +HY C++D
Sbjct: 603 VRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVD 662
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+LSR+ L++A+ FI MP PD+ W LLS+CR+ G+ EI + +E ++EL+P +
Sbjct: 663 LLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGY 722
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVL+S+IYA+ GKWD V +R++++ +G++KDPGCSW++ +++V++F +++
Sbjct: 723 YVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEV 782
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
L L M KEGY+ ++ VLHD++ EK +L HSE+LAIAFGLL PG P++V
Sbjct: 783 NKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQV 842
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+KNLRVC DCH TKYISKI QRE+LVRDA RFH+FK+G CSCGD+W
Sbjct: 843 MKNLRVCEDCHTVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 889
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 132/453 (29%), Positives = 228/453 (50%), Gaps = 36/453 (7%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P ++ WN +I +G ++A+ +Y+ + L TF +++ + ++
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRL-QPDTYTFPSVINACAGLLDFEMA 134
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+ IH +L GFGS +++G+ L+DMY + F++L
Sbjct: 135 KSIHDRVLDMGFGSDLYIGNALIDMYCR----------FNDL------------------ 166
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
+++R++F M +D +SW ++I+G NG EA++++ R G+ D +T SVL
Sbjct: 167 ---DKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVL 223
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
ACGGL ++EEG IH I + K +V V + L+ MYCK + +F M ++ V
Sbjct: 224 RACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAV 283
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW M+ GY Q G EE++K+F M N +PD T+ S++ +C +L LE G H
Sbjct: 284 SWNTMICGYSQVGLYEESIKLFMEMV-NQFKPDLLTITSILQACGHLGDLEFGKYVHDYM 342
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ +G T SN L+ Y KCGN+ S +F+ M +D VSW ++++ Y + G +E +
Sbjct: 343 ITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAM 402
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
LF KM+ +KPD VT + +LS ++ G + G+ + K G ++D+
Sbjct: 403 KLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAK-MGFNSNIVVSNTLVDM 460
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
++ G + ++ M D I W T+++SC
Sbjct: 461 YAKCGEMGDSLKVFENMK-ARDIITWNTIIASC 492
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 146/491 (29%), Positives = 234/491 (47%), Gaps = 41/491 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN LISG+ ++G N+A+++Y G+ S T S++L V+
Sbjct: 176 MPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDS-YTMSSVLRACGGLGSVEE 234
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G IHG I K G V V + L+ MY K + D +R FD++ ++ V +NTMI G +
Sbjct: 235 GDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQ 294
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL EES +LF E ++ F+ D T S+
Sbjct: 295 VGLYEESIKLF------------------------MEMVNQFKP--------DLLTITSI 322
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L ACG L LE GK +H ++I + ++ + + L++MY KC ++ ++ VF M K+
Sbjct: 323 LQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDS 382
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW +M+ Y QNG +EA+K+F M + ++PD T ++S L L G + H
Sbjct: 383 VSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCD 441
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
G S I VSN LV Y KCG + DS ++F M RD ++W +++ N
Sbjct: 442 LAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLG 501
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ + +M + G+ PD T++ +L CS +G+ + K G+ +I+
Sbjct: 502 LRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFK-LGLESDVPVGNVLIE 560
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN--P 478
+ S+ G L + M D + W L+S+C ++G GK A + E++ P
Sbjct: 561 MYSKCGSLRNSFQVFKLMK-TKDVVTWTALISACGMYGE---GKKAVRAFGEMEAAGIVP 616
Query: 479 ASYVLLSSIYA 489
++ I+A
Sbjct: 617 DHVAFVAIIFA 627
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 152/332 (45%), Gaps = 35/332 (10%)
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
Q F S+ A + ++H+ II +V + L+ Y + + SVFR
Sbjct: 13 QTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFR 72
Query: 234 TMA-WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
+ NV W +++ NG EA+ ++ QR ++PD +T SVI++CA L E
Sbjct: 73 LASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFE 132
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
H R L G S + + NAL+ Y + +++ + ++F EM +RD VSW +L+SGY
Sbjct: 133 MAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYN 192
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI---- 408
G NE ++++ + + G+ PD T+ VL AC G VE+G ++++ GI
Sbjct: 193 ANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEG-DIIHGLIEKIGIKKDV 251
Query: 409 -------------------RPIHDH--------YTCMIDILSRAGRLEEAKSFINKM--P 439
R I D + MI S+ G EE+ +M
Sbjct: 252 IVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ 311
Query: 440 FPPDAIGWATLLSSCRIHGNVEIGKWAAESLL 471
F PD + ++L +C G++E GK+ + ++
Sbjct: 312 FKPDLLTITSILQACGHLGDLEFGKYVHDYMI 343
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 259/648 (39%), Positives = 362/648 (55%), Gaps = 36/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + N +I G +A+ Y M+ GL R TF ++ S R
Sbjct: 48 IPNPTSYTCNSIIRGCTDKNLHQEALLFYQEMMVQGLIP-DRYTFPSLF---KSCRNSSE 103
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIH H K GF S + + L++MY+ G + A++ FD+
Sbjct: 104 GKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDK------------------ 145
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLF-REMRLEGLAMDQFTFGS 179
M+DK +SW TMI Q EA+ LF R M+ E + ++ T +
Sbjct: 146 -------------MEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVN 192
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VLTAC L K+IH +I + +V + + L+D+YCKC ++ A +F KN
Sbjct: 193 VLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKN 252
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+ SW M+ G+ ++ EEA+ +F MQ GI+ D T+ S++ +C +L +LE G H
Sbjct: 253 LFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHA 312
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ + + ALV Y KCG+IE + ++F+EM +D ++WTAL+ G A G+A
Sbjct: 313 YIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAEN 372
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ F++M G+KPD +T +GVL+ACS AG V++G +F M YGI+P +HY ++
Sbjct: 373 ALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLV 432
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
DIL RAGR+ EA+ I MP PD LL +CRIHGN+E + AA+ LLE+DPY+
Sbjct: 433 DILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQLLEIDPYHSG 492
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+YVLLS+IY S KW+ + R M E+G+RK PGCS I+ VH F D S S +
Sbjct: 493 TYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVHEFVKGDSSHRQSSE 552
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
I LE + K+ GYVPD S VL D+ EK L+ HSEKLAIAFGLL G PIR
Sbjct: 553 INEMLEDMISKLKNAGYVPDKSEVLFDMAEEEKETELSLHSEKLAIAFGLLSTSVGTPIR 612
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VVKNLR+CSDCH+ATK ISK+ REI+VRD RFH FK+G CSC FW
Sbjct: 613 VVKNLRICSDCHSATKLISKLYNREIIVRDRNRFHHFKDGTCSCRGFW 660
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 179/363 (49%), Gaps = 10/363 (2%)
Query: 100 FDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAI 159
FD IV + L G ++ +R +F + + S + ++I G L +EA+
Sbjct: 18 FDPFTASKIVAF----CSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCTDKNLHQEAL 73
Query: 160 DLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMY 219
++EM ++GL D++TF S+ +C EGKQIH + + + + L++MY
Sbjct: 74 LFYQEMMVQGLIPDRYTFPSLFKSCRN---SSEGKQIHCHSTKLGFASDTYAQNTLMNMY 130
Query: 220 CKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN-GIEPDDFTL 278
C + A VF M K VVSW M+ + Q EAV++F M ++ ++P++ TL
Sbjct: 131 SNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTL 190
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
+V+++CA L + H G + ++ L+ Y KCG ++ + LF++
Sbjct: 191 VNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQE 250
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
++ SW +++G+ + E + LF +M + G+K D+VT+ +L AC+ G +E G+ +
Sbjct: 251 KNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGK-W 309
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+K+ I T ++D+ ++ G +E A ++MP D + W L+ + G
Sbjct: 310 LHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMP-EKDVMTWTALILGLAMCG 368
Query: 459 NVE 461
E
Sbjct: 369 QAE 371
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 238/649 (36%), Positives = 376/649 (57%), Gaps = 36/649 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M F D VSWN L+SG + +DA+ + M +D +++ M+ S +
Sbjct: 312 MLFKDCVSWNTLLSGMVQNDMYSDAINHFQDM-QDSGQKPDQVSVLNMIAASGRSANLLA 370
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G ++H + +K G S + +G+ L+DMY K + F+ +PEK
Sbjct: 371 GMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEK-------------- 416
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
D ISWTT+I G QN +A++L R+++LE + +D GS+
Sbjct: 417 -----------------DLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSI 459
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC GL + + K+IH ++++ D + + +A+V++Y + + YA VF ++ K++
Sbjct: 460 LLACSGLKSEKLIKEIHGYVLKGGLAD-ILIQNAIVNVYGELALVDYARHVFESINSKDI 518
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWT+M+ NG + EA+++F ++ IEPD TL SV+ + A L+SL++G + HG
Sbjct: 519 VSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGF 578
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ G ++N+LV Y +CG +E++ +FN + RD + WT++++ G +
Sbjct: 579 LIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDA 638
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
IDLF KM + PD +T + +L ACS +GLV +G+ +FEIM EY + P +HY C++D
Sbjct: 639 IDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVD 698
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L+R+ LEEA F+ MP P A W LL +CRIH N ++G+ AA+ LL+L+ N +
Sbjct: 699 LLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTENSGN 758
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVL+S+ +A+ G+W+ V ++R M+ ++K PGCSWI+ ++++H F A D S P + I
Sbjct: 759 YVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARDKSHPQCNNI 818
Query: 541 YAELEKLNRKMIKE--GYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
Y +L + K++KE GY V HDV EK +ML HSE+LA+ +GLL G +
Sbjct: 819 YLKLAQFT-KLLKEKGGYRAQTKLVFHDVCEEEKTQMLYGHSERLALGYGLLVTSKGTCL 877
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R+ KNLR+C DCH K S+I+QR ++VRDA RFH F+ G CSCGDFW
Sbjct: 878 RITKNLRICDDCHAFFKIASEISQRTLVVRDASRFHHFERGLCSCGDFW 926
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 138/487 (28%), Positives = 251/487 (51%), Gaps = 40/487 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSWN +IS H G +A+ ++ M + G+ + + TF + L + +GR I
Sbjct: 215 DPVSWNSIISAHVGEGESLEALSLFRRMQEVGVES-NTYTFVSALQACEGPTFIKIGRGI 273
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H ILK + V+V + L+ MYA G + DA+
Sbjct: 274 HAVILKSNHFTDVYVSNALIAMYANCGQMEDAE--------------------------- 306
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
R+F+ M KD +SW T+++G++QN + +AI+ F++M+ G DQ + +++ A
Sbjct: 307 ----RVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAAS 362
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G L G ++HA+ I++ N+ +G++L+DMY KC +KY S F M K+++SWT
Sbjct: 363 GRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWT 422
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++ GY QN C +A+ + +Q ++ D +GS++ +C+ L S + + HG L
Sbjct: 423 TIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKG 482
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
GL I + NA+V YG+ ++ + +F +N +D VSWT++++ G A E ++LF
Sbjct: 483 GLAD-ILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELF 541
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
++ ++PD +TL+ VL A + ++KG+ ++++ G ++D+ +R
Sbjct: 542 NSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRK-GFFLEGLIANSLVDMYAR 600
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN--PASYV 482
G +E A++ N + D I W +++++ +HG GK A + ++ N P
Sbjct: 601 CGTMENARNIFNYVK-QRDLILWTSMINANGMHG---CGKDAIDLFSKMTDENVLPDHIT 656
Query: 483 LLSSIYA 489
L+ +YA
Sbjct: 657 FLALLYA 663
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 144/511 (28%), Positives = 255/511 (49%), Gaps = 45/511 (8%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
+WN +I S G +A+++Y M G+ +L TF +L + + LG +IHG
Sbjct: 115 TWNAMIGACVSAGRYVEAIELYKEMRVLGV-SLDAFTFPCVLKACGAFKERRLGCEIHGV 173
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
+K G+G +VFV + L+ MYAK G + A+ FD +GL
Sbjct: 174 AVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFD--------------SGL--------- 210
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
M+ D +SW ++I+ + G EA+ LFR M+ G+ + +TF S L AC G
Sbjct: 211 ------MEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGP 264
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
++ G+ IHA I++++H +V+V +AL+ MY C ++ AE VF++M +K+ VSW +L
Sbjct: 265 TFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLL 324
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
G QN +A+ F +MQ +G +PD ++ ++I++ A+L G + H ++ G+
Sbjct: 325 SGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGID 384
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
S + + N+L+ YGKC ++ F M +D +SWT +++GYA+ + ++L K+
Sbjct: 385 SNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKV 444
Query: 368 LSHGLKPDEVTLIGVLSACSRAGL-VEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
+ D + + +L ACS GL EK V + G+ I ++++
Sbjct: 445 QLEKMDVDPMMIGSILLACS--GLKSEKLIKEIHGYVLKGGLADILIQ-NAIVNVYGELA 501
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAA-ESLLELDPYNPASYVLLS 485
++ A+ + D + W ++++ C +H + I SL+E + P L+S
Sbjct: 502 LVDYARHVFESIN-SKDIVSWTSMITCC-VHNGLAIEALELFNSLIETN-IEPDLITLVS 558
Query: 486 SIYAS-------KGKWDHVSQLRRTMREKGV 509
+YA+ KGK H +R+ +G+
Sbjct: 559 VLYAAAALSSLKKGKEIHGFLIRKGFFLEGL 589
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 208/439 (47%), Gaps = 40/439 (9%)
Query: 21 SVNDAVKVYNLMLKDGLGNLSRI----TFSTMLIMSSSRRCVDLGRQIHGHILKF-GFGS 75
S+ +A + D L +R +S L + +S + + G+Q+H H LK +
Sbjct: 21 SLKEAFQSLTHFFTDPLPTTTRFPLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLD 80
Query: 76 YVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMK 135
VF+ + V MY K G YDA + FD++ E+ I
Sbjct: 81 SVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTI--------------------------- 113
Query: 136 DKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQ 195
+W MI + G EAI+L++EMR+ G+++D FTF VL ACG G +
Sbjct: 114 ----FTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCE 169
Query: 196 IHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT--MAWKNVVSWTAMLVGYGQN 253
IH ++ + VFV +AL+ MY KC + A +F + M + VSW +++ +
Sbjct: 170 IHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGE 229
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVS 313
G S EA+ +F MQ G+E + +T S + +C ++ G H L + + + VS
Sbjct: 230 GESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVS 289
Query: 314 NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLK 373
NAL+ Y CG +ED+ R+F M +D VSW L+SG + ++ I+ F+ M G K
Sbjct: 290 NALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQK 349
Query: 374 PDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKS 433
PD+V+++ +++A R+ + G +K +GI +ID+ + ++ S
Sbjct: 350 PDQVSVLNMIAASGRSANLLAGMEVHAYAIK-HGIDSNMHIGNSLIDMYGKCCCVKYMGS 408
Query: 434 FINKMPFPPDAIGWATLLS 452
MP D I W T+++
Sbjct: 409 AFEYMP-EKDLISWTTIIA 426
>gi|413945386|gb|AFW78035.1| hypothetical protein ZEAMMB73_343828 [Zea mays]
Length = 608
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/618 (39%), Positives = 349/618 (56%), Gaps = 62/618 (10%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
R++H +LK G + LV YA+ L+ DA+R FD+ P +++ +Y+ ++ +
Sbjct: 21 RRVHARLLKEGLADLPSAPALLVSAYARSCLLPDARRAFDDAPRRDLHLYSALLAAVSHS 80
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
E L R M D+ L D F S+
Sbjct: 81 SDPELVLPLLRRMLSDDA------------------------------LRPDHFVLASLA 110
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+A G L +L G+Q+HA + + + V S+L+DMYCKC + A VF ++ KN V
Sbjct: 111 SAAGRLRSLRLGRQLHAHFAASPYSADNVVKSSLIDMYCKCGVPQDARKVFDSIGVKNSV 170
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEP---------------------------- 273
WTA++ GY NGC+ EA+ +F +M +G+
Sbjct: 171 VWTALISGYASNGCTGEALDLFQSMPAHGLFTWTALISGFVKAGNYTGAMGLFVEMRRDD 230
Query: 274 ----DDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
D F L +VI A+LA+L G Q HG + G +S + V NALV Y KC +I +
Sbjct: 231 IRIHDAFVLATVIGGAADLAALVLGRQLHGFVMRLGFLSSMIVGNALVDMYSKCSDIHSA 290
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
+F + VRD +SWT ++ G A+ G+A E L+ +ML G+KP+EVT +G++ ACS A
Sbjct: 291 REVFEGITVRDVISWTTILVGEAQHGRAEEVFALYNRMLLAGMKPNEVTFVGLIYACSHA 350
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
GLV+KGR F+ M +EYG++P HYTC +D+LSR+G L EA+ I MP+ PD W
Sbjct: 351 GLVQKGRQLFDSMKREYGMKPGVQHYTCYLDLLSRSGYLSEAEKLITTMPYEPDEATWGA 410
Query: 450 LLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
LLS+C+ H + ++ A++LLEL P +P++Y+LLS++YA KWD V+++R+ M E +
Sbjct: 411 LLSACKKHNDTQMCLRVADNLLELRPKDPSTYILLSNVYAVNCKWDSVAKVRKIMAEMEI 470
Query: 510 RKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVEL 569
RK PG SW++ IF A + ++I LE+L +M K GYVPD SSV+HD+E
Sbjct: 471 RKVPGYSWVEAGRESRIFHAGEVPLDVGEEITCFLEELVSEMRKRGYVPDTSSVMHDLEE 530
Query: 570 SEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRD 629
EK + L HSE+LA+AFG+L PPG IRVVKNLRVC DCH K+IS I QR+I+VRD
Sbjct: 531 HEKEQHLFVHSERLAVAFGILKSPPGSVIRVVKNLRVCGDCHTVMKFISAIAQRKIIVRD 590
Query: 630 AVRFHLFKNGECSCGDFW 647
A RFH F++G CSC +FW
Sbjct: 591 ASRFHHFEDGNCSCSEFW 608
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 179/356 (50%), Gaps = 5/356 (1%)
Query: 32 MLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLG 91
ML D +++ + R + LGRQ+H H + + V S L+DMY K G
Sbjct: 93 MLSDDALRPDHFVLASLASAAGRLRSLRLGRQLHAHFAASPYSADNVVKSSLIDMYCKCG 152
Query: 92 LIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQ 151
+ DA++ FD + KN V++ +I+G G E+ LF+ M +WT +I+G ++
Sbjct: 153 VPQDARKVFDSIGVKNSVVWTALISGYASNGCTGEALDLFQSMPAHGLFTWTALISGFVK 212
Query: 152 NGLEREAIDLFREMRLEGLAM-DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVF 210
G A+ LF EMR + + + D F +V+ L AL G+Q+H F++R ++
Sbjct: 213 AGNYTGAMGLFVEMRRDDIRIHDAFVLATVIGGAADLAALVLGRQLHGFVMRLGFLSSMI 272
Query: 211 VGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
VG+ALVDMY KC I A VF + ++V+SWT +LVG Q+G +EE ++ M G
Sbjct: 273 VGNALVDMYSKCSDIHSAREVFEGITVRDVISWTTILVGEAQHGRAEEVFALYNRMLLAG 332
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQ-FHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
++P++ T +I +C++ +++G Q F G+ + + + G + ++
Sbjct: 333 MKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKREYGMKPGVQHYTCYLDLLSRSGYLSEA 392
Query: 330 HRLFNEMNVR-DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
+L M DE +W AL+S K + + + +L L+P + + +LS
Sbjct: 393 EKLITTMPYEPDEATWGALLSACKKHNDTQMCLRVADNLLE--LRPKDPSTYILLS 446
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 123/268 (45%), Gaps = 33/268 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP H +W LISG G+ A+ ++ M +D + +T++ ++ + L
Sbjct: 195 MPAHGLFTWTALISGFVKAGNYTGAMGLFVEMRRDDIRIHDAFVLATVIGGAADLAALVL 254
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+HG +++ GF S + VG+ LVDMY+K I+ A+ F+ + ++++ + T++ G
Sbjct: 255 GRQLHGFVMRLGFLSSMIVGNALVDMYSKCSDIHSAREVFEGITVRDVISWTTILVG--- 311
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
Q+G E L+ M L G+ ++ TF +
Sbjct: 312 ----------------------------EAQHGRAEEVFALYNRMLLAGMKPNEVTFVGL 343
Query: 181 LTACGGLLALEEGKQIHAFIIRN-DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK- 238
+ AC +++G+Q+ + R K V + +D+ + + AE + TM ++
Sbjct: 344 IYACSHAGLVQKGRQLFDSMKREYGMKPGVQHYTCYLDLLSRSGYLSEAEKLITTMPYEP 403
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNM 266
+ +W A+L ++ ++ +++ N+
Sbjct: 404 DEATWGALLSACKKHNDTQMCLRVADNL 431
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 244/652 (37%), Positives = 396/652 (60%), Gaps = 17/652 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKV-YNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
+ F D + ++I+G+A + + A+++ Y + +KD +++++M+ C D
Sbjct: 37 VSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKD------VVSWNSMI--KGCFDCAD 88
Query: 60 L--GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
L R++ + + S+ + +++ + + G I A+ F ++P ++I +N+MI G
Sbjct: 89 LTMARKLFDEMPERSVVSW----TTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMIYG 144
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD--QF 175
G VE+ RLF+ M ++ ISWT+MI GL Q+G EA+ LFR+M G+ +
Sbjct: 145 YCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSS 204
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
T+ V+TAC AL +G QIHA + + + + ++ +AL+ Y CK ++ + VF
Sbjct: 205 TYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGK 264
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
NVV WTA++ GYG N E+A+K+F M R G+ P+ + S ++SC L +L+ G
Sbjct: 265 LHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGR 324
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
+ H ++ GL + + V N+L+ Y +CGN+ D +F ++ ++ VSW +++ G A+ G
Sbjct: 325 EIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHG 384
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
+ F +M+ ++PDE+T G+LSACS +G+ +KGR F+ + DHY
Sbjct: 385 CGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHY 444
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
CM+DIL R+G+LEEA+ I MP +++ W LLS+C +H +E+ + AA+ +++L+P
Sbjct: 445 ACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEP 504
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSP 535
+ ++YVLLS++YAS +W VS++RR M+++G+ K PG SWI K + F + D S P
Sbjct: 505 HCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHP 564
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
SD+IY +LE L K+ + GYVPD LHDVE +K ML++HSE+LAI FGL+ G
Sbjct: 565 SSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEG 624
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
I V+KNLRVC DCH+A K I+KI +R+I+VRD+ RFH F +G CSCGD+W
Sbjct: 625 STITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 676
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 178/379 (46%), Gaps = 21/379 (5%)
Query: 93 IYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQN 152
I +A+ FD++ ++ +Y MITG R + + +LF M KD +SW +MI G
Sbjct: 27 IDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDC 86
Query: 153 GLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVG 212
A LF EM + S T G L + + + +D +
Sbjct: 87 ADLTMARKLFDEMPERSVV-------SWTTMINGFLQFGKIEVAEGLFYKMPFRD-IAAW 138
Query: 213 SALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE 272
++++ YC ++ +F+ M +NV+SWT+M+ G Q+G SEEA+ +F M G+E
Sbjct: 139 NSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVE 198
Query: 273 --PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
P T VI++CAN ++L +G Q H G +S AL+TFY C +EDS
Sbjct: 199 VKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSL 258
Query: 331 RLFN---EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS 387
R+F+ MNV V WTALV+GY K + + +F +M+ G+ P++ + L++C
Sbjct: 259 RVFHGKLHMNV---VIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCC 315
Query: 388 RAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGW 447
++ GR VK G+ +I + R G L + ++ + + W
Sbjct: 316 GLEALDWGREIHTAAVK-LGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRIS-KKNIVSW 373
Query: 448 ATLLSSCRIHGNVEIGKWA 466
+++ C HG G WA
Sbjct: 374 NSVIVGCAQHG---CGMWA 389
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 33/222 (14%)
Query: 203 NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKI 262
N K F +++ + + + I A +VF +++ +V +T M+ GY +N + A+++
Sbjct: 5 NYTKFCTFSYQSMITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQL 64
Query: 263 FCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTF--- 319
F M D + S+I C + A L + ++S+ T+ N + F
Sbjct: 65 FYEMP----VKDVVSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKI 120
Query: 320 ----------------------YGKC--GNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
YG C G +ED RLF EM R+ +SWT+++ G + G
Sbjct: 121 EVAEGLFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHG 180
Query: 356 KANETIDLFEKMLSHG--LKPDEVTLIGVLSACSRAGLVEKG 395
++ E + LF +M+ G +KP T V++AC+ A + +G
Sbjct: 181 RSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQG 222
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 250/648 (38%), Positives = 365/648 (56%), Gaps = 34/648 (5%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P + VSW L+SG A +G + A+ + M ++G+ + TF + +S R G
Sbjct: 69 PARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAP-NDFTFPCVFKAVASLRLPVTG 127
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+QIH +K G VFVG DMY K L DA++ FDE+PE
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPE---------------- 171
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
++ +W I+ + +G +EAI+ F E R G + TF L
Sbjct: 172 ---------------RNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFL 216
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
AC L L+ G Q+H + R+ +V V + L+D Y KCK I+ +E +F M KN V
Sbjct: 217 NACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAV 276
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW +++ Y QN E+A ++ ++ +E DF + SV+S+CA +A LE G H +
Sbjct: 277 SWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHA 336
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ + I V +ALV YGKCG IEDS + F+EM ++ V+ +L+ GYA G+ + +
Sbjct: 337 VKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMAL 396
Query: 362 DLFEKMLSHGL--KPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
LFE M G P+ +T + +LSACSRAG VE G F+ M YGI P +HY+C++
Sbjct: 397 ALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIV 456
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L RAG +E+A FI KMP P W L ++CR+HG +G AAE+L +LDP +
Sbjct: 457 DMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHLGILAAENLFKLDPKDSG 516
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
++VLLS+ +A+ G+W + +R M+ G++K G SWI K++VH F A D S + +
Sbjct: 517 NHVLLSNTFAAAGRWAEANTVREEMKGVGIKKGAGYSWITVKNQVHAFQAKDRSHKMNKE 576
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
I L KL KM GY PD+ L+D+E EK ++HHSEKLA+AFGL+ +P +PIR
Sbjct: 577 IQTMLTKLRNKMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLVALPLSVPIR 636
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ KNLR+C DCH+ K++S +REI+VRD RFH FK+G CSC D+W
Sbjct: 637 ITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 200/411 (48%), Gaps = 41/411 (9%)
Query: 30 NLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILK-FGFGSYVFVGSPLVDMYA 88
+L+ D LG L + ST SS R LGR +H I+K F+ + L++MY+
Sbjct: 2 SLLTADALGLLLKNAIST-----SSMR---LGRVVHARIVKTLDSPPPPFLANYLINMYS 53
Query: 89 KLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITG 148
KL + PE +R + R ++ +SWT++++G
Sbjct: 54 KL-----------DHPE--------------------SARLVLRLTPARNVVSWTSLVSG 82
Query: 149 LMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDN 208
L QNG A+ F EMR EG+A + FTF V A L GKQIHA ++ +
Sbjct: 83 LAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILD 142
Query: 209 VFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR 268
VFVG + DMYCK + A +F + +N+ +W A + +G +EA++ F +R
Sbjct: 143 VFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRR 202
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIED 328
G +P+ T +++C++ L+ G Q HG +G + ++V N L+ FYGKC I
Sbjct: 203 IGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRS 262
Query: 329 SHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
S +F EM +++ VSW +LV+ Y + + + L+ + ++ + + VLSAC+
Sbjct: 263 SEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAG 322
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP 439
+E GR VK R I + ++D+ + G +E+++ ++MP
Sbjct: 323 MAGLELGRSIHAHAVKACVERNIFVG-SALVDMYGKCGCIEDSEQAFDEMP 372
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 129/262 (49%), Gaps = 3/262 (1%)
Query: 193 GKQIHAFIIRN-DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYG 251
G+ +HA I++ D F+ + L++MY K + A V R +NVVSWT+++ G
Sbjct: 25 GRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGLA 84
Query: 252 QNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFIT 311
QNG A+ F M+R G+ P+DFT V + A+L G Q H ++ G I +
Sbjct: 85 QNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVF 144
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG 371
V + Y K +D+ +LF+E+ R+ +W A +S G+ E I+ F + G
Sbjct: 145 VGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIG 204
Query: 372 LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEA 431
+P+ +T G L+ACS L++ G ++ + G Y +ID + ++ +
Sbjct: 205 GQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRS-GFDTDVSVYNGLIDFYGKCKQIRSS 263
Query: 432 KSFINKMPFPPDAIGWATLLSS 453
+ +M +A+ W +L+++
Sbjct: 264 EIIFAEMGM-KNAVSWCSLVAA 284
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 239/647 (36%), Positives = 375/647 (57%), Gaps = 38/647 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLM--LKDGLGNLSRITFSTMLIMSSSRRCVDLGR 62
D VSW+ +I + G +++A+ + M ++ + I+ + +L + + LG+
Sbjct: 189 DVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLK---LGK 245
Query: 63 QIHGHILKFGF--GSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+H ++++ G S V + + L+DMY K + A+R FD L + +I
Sbjct: 246 AMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASI------------ 293
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
ISWT MI + E + LF +M EG+ ++ T S+
Sbjct: 294 -------------------ISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSL 334
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ CG ALE GK +HAF +RN ++ + +A +DMY KC ++ A SVF + K++
Sbjct: 335 VKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDL 394
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+ W+AM+ Y QN C +EA IF +M GI P++ T+ S++ CA SLE G H
Sbjct: 395 MMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSY 454
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
G+ + + + V Y CG+I+ +HRLF E RD W A++SG+A G
Sbjct: 455 IDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAA 514
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++LFE+M + G+ P+++T IG L ACS +GL+++G+ F MV E+G P +HY CM+D
Sbjct: 515 LELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVD 574
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG L+EA I MP P+ + + L++C++H N+++G+WAA+ L L+P+
Sbjct: 575 LLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGY 634
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
VL+S+IYAS +W V+ +RR M+++G+ K+PG S I+ +H F D P + ++
Sbjct: 635 NVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKV 694
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y ++++ K+ GY PD+S VLH+++ +K+ LN+HSEKLA+A+GL+ PG+PIR+
Sbjct: 695 YEMIDEMREKLEDAGYTPDVSCVLHNIDKEKKVSALNYHSEKLAMAYGLISTAPGVPIRI 754
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VKNLRVC DCHNATK +SKI REI+VRD RFH FK G CSC D+W
Sbjct: 755 VKNLRVCDDCHNATKLLSKIYGREIIVRDRNRFHHFKEGSCSCCDYW 801
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 128/484 (26%), Positives = 236/484 (48%), Gaps = 41/484 (8%)
Query: 10 NLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHIL 69
+ LI+ + + DA K+Y M + + ++L LG+++HG ++
Sbjct: 93 SFLITSYIKNNCPADAAKIYAYM-RGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVV 151
Query: 70 KFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRR 129
K GF VFV + L+ MY+++G + A R
Sbjct: 152 KNGFHGDVFVCNALIMMYSEVGSLALA-------------------------------RL 180
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
LF +++KD +SW+TMI ++GL EA+DL R+M + + + S+ L
Sbjct: 181 LFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELAD 240
Query: 190 LEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
L+ GK +HA+++RN K V + +AL+DMY KC+++ YA VF ++ +++SWTAM+
Sbjct: 241 LKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMI 300
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
Y E V++F M G+ P++ T+ S++ C +LE G H +L G
Sbjct: 301 AAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFT 360
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
+ ++ A + YGKCG++ + +F+ +D + W+A++S YA+ +E D+F M
Sbjct: 361 LSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHM 420
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
G++P+E T++ +L C++AG +E G+ + + + GI+ T +D+ + G
Sbjct: 421 TGCGIRPNERTMVSLLMICAKAGSLEMGK-WIHSYIDKQGIKGDMILKTSFVDMYANCGD 479
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY--NPASYVLLS 485
++ A + D W ++S +HG+ G+ A E E++ P +
Sbjct: 480 IDTAHRLFAEAT-DRDISMWNAMISGFAMHGH---GEAALELFEEMEALGVTPNDITFIG 535
Query: 486 SIYA 489
+++A
Sbjct: 536 ALHA 539
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 17/193 (8%)
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
L E +Q+H I+ + V A ++ Y N + ++
Sbjct: 56 LNETQQLHGHFIKTSSNCSYRVPLAALESYSS-----------------NAAIHSFLITS 98
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
Y +N C +A KI+ M+ E D+F + SV+ +C + S G + HG + G
Sbjct: 99 YIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGD 158
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
+ V NAL+ Y + G++ + LF+++ +D VSW+ ++ Y + G +E +DL M
Sbjct: 159 VFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHV 218
Query: 370 HGLKPDEVTLIGV 382
+KP E+ +I +
Sbjct: 219 MRVKPSEIGMISI 231
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 249/640 (38%), Positives = 366/640 (57%), Gaps = 32/640 (5%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRC-VDLGRQIHGH 67
+N+L+ G DA+ ++ ML + + + S SR C +D+GR + +
Sbjct: 86 YNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAY 145
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
+K G + FV S L+ MYA G + A+ FD E +VM
Sbjct: 146 AVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVM----------------- 188
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
W ++ ++NG E +++F+ M G+A D+ T SV+TACG +
Sbjct: 189 --------------WNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRI 234
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
+ GK + + N + +AL+DMY KC I A +F M ++VV+W+AM+
Sbjct: 235 GDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMI 294
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
GY Q EA+ +F MQ +EP+D T+ SV+S+CA L +LE G H L
Sbjct: 295 SGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLS 354
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
+ ALV FY KCG I+D+ F M V++ +WTAL+ G A G+ E ++LF M
Sbjct: 355 LTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSM 414
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
G++P +VT IGVL ACS + LVE+GR +F+ M ++YGI+P +HY CM+D+L RAG
Sbjct: 415 REAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGL 474
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSI 487
++EA FI MP P+A+ W LLSSC +H NV IG+ A + ++ L+P + YVLLS+I
Sbjct: 475 VDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNI 534
Query: 488 YASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKL 547
YAS G+W + +R+ M+++G+ K PGCS I+ V F A+D P +IY ++E++
Sbjct: 535 YASAGQWKDAAMVRKEMKDRGIEKTPGCSLIELDGVVFEFFAEDSDHPELREIYQKVEEM 594
Query: 548 NRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVC 607
++ GYVP+ + V +VE EK ++HHSEKLAIAFGL+ + PG IR+ KNLRVC
Sbjct: 595 IGRIKVAGYVPNTADVRLEVEEREKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVC 654
Query: 608 SDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+DCH+ATK ISK+ REI+VRD FH FK+G CSC D+W
Sbjct: 655 ADCHSATKLISKVYDREIVVRDRNIFHHFKDGTCSCNDYW 694
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRC--- 57
M D V+W+ +ISG+ +A+ +++ M L+R+ + + ++S C
Sbjct: 282 MQSRDVVAWSAMISGYTQADQCREALGLFSEM------QLARVEPNDVTMVSVLSACAVL 335
Query: 58 --VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
++ G+ +H ++ + +G+ LVD YAK G I DA F+ +P KN + +I
Sbjct: 336 GALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALI 395
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
G + NG REA++LF MR G+
Sbjct: 396 KG-------------------------------MATNGRGREALELFSSMREAGIEPTDV 424
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYAESVFR 233
TF VL AC +EEG++ H + D+ K V +VD+ + + A R
Sbjct: 425 TFIGVLMACSHSCLVEEGRR-HFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIR 483
Query: 234 TMAWK-NVVSWTAMLVGYGQN---GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCA 286
TM + N V W A+L + G EEA+K ++ N D+ L S I + A
Sbjct: 484 TMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISL--NPSHSGDYVLLSNIYASA 538
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 83/175 (47%), Gaps = 6/175 (3%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +W LI G A++G +A+++++ M + G+ + +TF +L+ S V+
Sbjct: 383 MPVKNSWTWTALIKGMATNGRGREALELFSSMREAGI-EPTDVTFIGVLMACSHSCLVEE 441
Query: 61 GRQIHGHILK-FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITGL 118
GR+ + + +G V +VD+ + GL+ +A + +P E N V++ +++
Sbjct: 442 GRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSC 501
Query: 119 LRR---GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL 170
G+ EE+ + + S + + G ++A + +EM+ G+
Sbjct: 502 AVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGI 556
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/647 (37%), Positives = 371/647 (57%), Gaps = 42/647 (6%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
+S N LI G + A++V + + S+ T+ +++ R + G ++H
Sbjct: 47 ISNNQLIQSLCKEGKLKQALRVLSQE-----SSPSQQTYELLILCCGHRSSLSDGLRVHR 101
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
HIL G F+ + L+ MY+ LG + A++ FD+ ++ I +
Sbjct: 102 HILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYV---------------- 145
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
W + L G E + L+ +M G+ D+FT+ VL AC
Sbjct: 146 ---------------WNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVA 190
Query: 187 LLA----LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
L +GK+IHA + R + +V++ + LVDMY + + YA VF M +NVVS
Sbjct: 191 SECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVS 250
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNM--QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
W+AM+ Y +NG + EA++ F M + P+ T+ SV+ +CA+LA+LE+G HG
Sbjct: 251 WSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGY 310
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
L GL S + V +ALVT YG+CG ++ R+F+ M+ RD VSW +L+S Y G +
Sbjct: 311 ILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKA 370
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
I +FE+ML++G P VT + VL ACS GLVE+G+ FE M +++GI+P +HY CM+D
Sbjct: 371 IQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVD 430
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RA RL+EA + M P W +LL SCRIHGNVE+ + A+ L L+P N +
Sbjct: 431 LLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGN 490
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLL+ IYA WD V ++++ + +G++K PG W++ + +++ F + D +P +QI
Sbjct: 491 YVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSMDEFNPLMEQI 550
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
+A L KL M ++GY+P VL+++E EK +++ HSEKLA+AFGL+ G PIR+
Sbjct: 551 HAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRI 610
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLR+C DCH TK+ISK ++EILVRD RFH FKNG CSCGD+W
Sbjct: 611 TKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 113/240 (47%), Gaps = 39/240 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLML---KDGLGNLSRITFSTMLIMSSSRRC 57
MP + VSW+ +I+ +A +G +A++ + M+ KD N +T ++L +S
Sbjct: 243 MPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPN--SVTMVSVLQACASLAA 300
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
++ GR IHG+IL+ G S + V S LV MY + G + +R FD + ++++V
Sbjct: 301 LEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVV-------- 352
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
SW ++I+ +G R+AI +F EM G + TF
Sbjct: 353 -----------------------SWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTF 389
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
SVL AC +EEGK++ + R DH K V + +VD+ + + A + + M
Sbjct: 390 VSVLGACSHEGLVEEGKRLFESMWR-DHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDM 448
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 244/652 (37%), Positives = 396/652 (60%), Gaps = 17/652 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKV-YNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
+ F D + ++I+G+A + + A+++ Y + +KD +++++M+ C D
Sbjct: 21 VSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKD------VVSWNSMI--KGCFDCAD 72
Query: 60 L--GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
L R++ + + S+ + +++ + + G I A+ F ++P ++I +N+MI G
Sbjct: 73 LTMARKLFDEMPERSVVSW----TTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMIYG 128
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD--QF 175
G VE+ RLF+ M ++ ISWT+MI GL Q+G EA+ LFR+M G+ +
Sbjct: 129 YCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSS 188
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
T+ V+TAC AL +G QIHA + + + + ++ +AL+ Y CK ++ + VF
Sbjct: 189 TYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGK 248
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
NVV WTA++ GYG N E+A+K+F M R G+ P+ + S ++SC L +L+ G
Sbjct: 249 LHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGR 308
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
+ H ++ GL + + V N+L+ Y +CGN+ D +F ++ ++ VSW +++ G A+ G
Sbjct: 309 EIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHG 368
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
+ F +M+ ++PDE+T G+LSACS +G+ +KGR F+ + DHY
Sbjct: 369 CGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHY 428
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
CM+DIL R+G+LEEA+ I MP +++ W LLS+C +H +E+ + AA+ +++L+P
Sbjct: 429 ACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEP 488
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSP 535
+ ++YVLLS++YAS +W VS++RR M+++G+ K PG SWI K + F + D S P
Sbjct: 489 HCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHP 548
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
SD+IY +LE L K+ + GYVPD LHDVE +K ML++HSE+LAI FGL+ G
Sbjct: 549 SSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEG 608
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
I V+KNLRVC DCH+A K I+KI +R+I+VRD+ RFH F +G CSCGD+W
Sbjct: 609 STITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 660
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 178/379 (46%), Gaps = 21/379 (5%)
Query: 93 IYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQN 152
I +A+ FD++ ++ +Y MITG R + + +LF M KD +SW +MI G
Sbjct: 11 IDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDC 70
Query: 153 GLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVG 212
A LF EM + S T G L + + + +D +
Sbjct: 71 ADLTMARKLFDEMPERSVV-------SWTTMINGFLQFGKIEVAEGLFYKMPFRD-IAAW 122
Query: 213 SALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE 272
++++ YC ++ +F+ M +NV+SWT+M+ G Q+G SEEA+ +F M G+E
Sbjct: 123 NSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVE 182
Query: 273 --PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
P T VI++CAN ++L +G Q H G +S AL+TFY C +EDS
Sbjct: 183 VKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSL 242
Query: 331 RLFN---EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS 387
R+F+ MNV V WTALV+GY K + + +F +M+ G+ P++ + L++C
Sbjct: 243 RVFHGKLHMNV---VIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCC 299
Query: 388 RAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGW 447
++ GR VK G+ +I + R G L + ++ + + W
Sbjct: 300 GLEALDWGREIHTAAVK-LGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRIS-KKNIVSW 357
Query: 448 ATLLSSCRIHGNVEIGKWA 466
+++ C HG G WA
Sbjct: 358 NSVIVGCAQHG---CGMWA 373
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 237/606 (39%), Positives = 362/606 (59%), Gaps = 37/606 (6%)
Query: 43 ITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDE 102
IT+S ++ R V R +H H+ G+ F+ + L++MY K G
Sbjct: 17 ITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFG----------- 65
Query: 103 LPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLF 162
L++E+R LF M D++ +SWTTMI+ + L +A+D
Sbjct: 66 --------------------LLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFL 105
Query: 163 REMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC 222
M EG+ + +T+ SVL AC GLL L +Q+H I++ + +VFV SAL+D Y K
Sbjct: 106 ILMLREGVRPNMYTYSSVLRACDGLLNL---RQLHGSILKVGLESDVFVRSALIDTYSKL 162
Query: 223 KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
A +VF M ++V W +++ G+ QN +E + ++ M+R D TL SV+
Sbjct: 163 GEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVL 222
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDE 341
+C LA LE G Q H L + ++NAL+ Y KCG++ED++ LF M +D
Sbjct: 223 RACTGLALLELGRQVHVHVLKYD--QDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDV 280
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEI 401
+SW+ +++G A+ G + + + LFE M S G KP+ +T++GVL ACS AGLV G +YF+
Sbjct: 281 ISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQS 340
Query: 402 MVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
M + +GI P +HY C+ID+L RAG+L+EA I++M PDA+ W LL +CR+H NV+
Sbjct: 341 MKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVD 400
Query: 462 IGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYK 521
+ +AA+ +L+LDP + +Y+LLS+IYA+ KW+ V+++RR MR +GV+KDPGCSWI+
Sbjct: 401 LAIYAAKEILKLDPADAGTYILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVS 460
Query: 522 SRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSE 581
+VH F D S P ++I EL +L +++++ GYVPD + VL D+E + L +HSE
Sbjct: 461 KQVHAFILGDNSHPRIEEIKRELSQLIQRLMRLGYVPDTNFVLQDLEGEQMEDSLQYHSE 520
Query: 582 KLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGEC 641
KLAI FGL+ +P I + KNLR+C DCH K +S++ R I++RD +R+H F+ G C
Sbjct: 521 KLAIVFGLMSLPNQKTIHIRKNLRICGDCHIFAKLVSQLENRVIVIRDPIRYHHFRGGVC 580
Query: 642 SCGDFW 647
SCGD+W
Sbjct: 581 SCGDYW 586
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 186/355 (52%), Gaps = 44/355 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW +IS +++ + A+ LML++G+ + T+S++L R C L
Sbjct: 77 MPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGV-RPNMYTYSSVL-----RACDGL 130
Query: 61 G--RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
RQ+HG ILK G S VFV S L+D Y+KLG +DA F+E+ ++V++N++I G
Sbjct: 131 LNLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGF 190
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+ +E+ L++ MK D ++ DQ T
Sbjct: 191 AQNSDGDETLHLYKRMKRADFVA-------------------------------DQSTLT 219
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF-RTMAW 237
SVL AC GL LE G+Q+H +++ D ++ + +AL+DMYCKC S++ A +F R M
Sbjct: 220 SVLRACTGLALLELGRQVHVHVLKYDQ--DLILNNALLDMYCKCGSLEDANLLFTRMMTE 277
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQ 296
K+V+SW+ M+ G QNG S +A+K+F M+ G +P+ T+ V+ +C++ + +G
Sbjct: 278 KDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYY 337
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
F G+ ++ G+ G ++++ +L +EMN D V+W L+
Sbjct: 338 FQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGA 392
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 151/294 (51%), Gaps = 6/294 (2%)
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M L+ D T+ ++ C A+++ + +H + N ++ F+ + L++MY K
Sbjct: 7 MHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGL 66
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A ++F M +NVVSWT M+ Y + + +A+ M R G+ P+ +T SV+ +
Sbjct: 67 LDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRA 126
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
C L +L Q HG L GL S + V +AL+ Y K G D+ +FNEM D V W
Sbjct: 127 CDGLLNLR---QLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVW 183
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
+++ G+A+ +ET+ L+++M D+ TL VL AC+ L+E GR + V
Sbjct: 184 NSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQ-VHVHVL 242
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+Y I ++ ++D+ + G LE+A +M D I W+T+++ +G
Sbjct: 243 KYDQDLILNN--ALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNG 294
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 251/643 (39%), Positives = 366/643 (56%), Gaps = 40/643 (6%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD--LGRQIHG 66
+N +I G + +++++Y+ M K+GL S +F+ ++ + R +D LG ++H
Sbjct: 76 FNTMIRGLVLNDCFQESIEIYHSMRKEGL---SPDSFTFPFVLKACARVLDSELGVKMHS 132
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++K G + FV L+++Y K G I +A + FD++P
Sbjct: 133 LVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIP---------------------- 170
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
DK+ SWT I+G + G REAID+FR + GL D F+ VL+AC
Sbjct: 171 ---------DKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKR 221
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L G+ I +I N NVFV +ALVD Y KC +++ A SVF M KN+VSW++M
Sbjct: 222 TGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSM 281
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG- 305
+ GY NG +EA+ +F M G++PD + + V+ SCA L +LE G +L+ G
Sbjct: 282 IQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDW--ASNLINGN 339
Query: 306 -LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
+ + AL+ Y KCG ++ + +F M +D V W A +SG A G + + LF
Sbjct: 340 EFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLF 399
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+M G+KPD T +G+L AC+ AGLVE+GR YF M + + P +HY CM+D+L R
Sbjct: 400 GQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGR 459
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG L+EA I MP +AI W LL CR+H + ++ + + L+ L+P++ +YVLL
Sbjct: 460 AGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLL 519
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S+IYA+ KW+ +++R M E+GV+K PG SWI+ VH F D S P S++IYA+L
Sbjct: 520 SNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKL 579
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
+L + + GYVP VL D+E EK + HSEKLA+AFGL+ P I VVKNL
Sbjct: 580 GELAKDLKAAGYVPTTDHVLFDIEEEEKEHFIGCHSEKLAVAFGLISTAPNDKILVVKNL 639
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RVC DCH A K+IS+I REI+VRD RFH F +G CSC D+W
Sbjct: 640 RVCGDCHEAIKHISRIAGREIIVRDNNRFHCFTDGLCSCKDYW 682
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 117/358 (32%), Positives = 192/358 (53%), Gaps = 4/358 (1%)
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
+++ + N ++ G S R+ K+ + + TMI GL+ N +E+I+++
Sbjct: 39 DEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLNDCFQESIEIYHS 98
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
MR EGL+ D FTF VL AC +L E G ++H+ +++ + + FV +L+++Y KC
Sbjct: 99 MRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGF 158
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
I A VF + KN SWTA + GY G EA+ +F + G+ PD F+L V+S+
Sbjct: 159 IDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSA 218
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
C L G G++ + V+ ALV FYGKCGN+E + +F+ M ++ VSW
Sbjct: 219 CKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSW 278
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV- 403
++++ GYA G E +DLF KML+ GLKPD ++GVL +C+R G +E G ++
Sbjct: 279 SSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLING 338
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
E+ + T +ID+ ++ GR++ A M D + W +S + G+V+
Sbjct: 339 NEFLDNSVLG--TALIDMYAKCGRMDRAWEVFRGMR-KKDRVVWNAAISGLAMSGHVK 393
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 174/354 (49%), Gaps = 38/354 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + SW ISG+ G +A+ ++ +L+ GL S FS + ++S+ +R DL
Sbjct: 169 IPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDS---FSLVEVLSACKRTGDL 225
Query: 61 --GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G I +I + G VFV + LVD Y K G + A+ FD + EKNIV +++MI G
Sbjct: 226 RSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQG- 284
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
NGL +EA+DLF +M EGL D +
Sbjct: 285 ------------------------------YASNGLPKEALDLFFKMLNEGLKPDCYAMV 314
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
VL +C L ALE G I N+ DN +G+AL+DMY KC + A VFR M K
Sbjct: 315 GVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKK 374
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-F 297
+ V W A + G +G ++A+ +F M+++GI+PD T ++ +C + +EEG + F
Sbjct: 375 DRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYF 434
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
+ V L I +V G+ G ++++H+L M + + + W AL+ G
Sbjct: 435 NSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGG 488
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 168/358 (46%), Gaps = 38/358 (10%)
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
G L+ K IHA ++R ++ ++ + ++ + Y+ + N+ +
Sbjct: 19 GFSCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNT 78
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
M+ G N C +E+++I+ +M++ G+ PD FT V+ +CA + E G + H + G
Sbjct: 79 MIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAG 138
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
+ V +L+ Y KCG I+++ ++F+++ ++ SWTA +SGY GK E ID+F
Sbjct: 139 CEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFR 198
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
++L GL+PD +L+ VLSAC R G + G E + + +R + T ++D +
Sbjct: 199 RLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVF-VATALVDFYGKC 257
Query: 426 GRLEEAKSFI--------------------NKMP--------------FPPDAIGWATLL 451
G +E A+S N +P PD +L
Sbjct: 258 GNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVL 317
Query: 452 SSCRIHGNVEIGKWAAESLLELDPY--NPASYVLLSSIYASKGKWDHVSQLRRTMREK 507
SC G +E+G WA+ +L+ + + N L +YA G+ D ++ R MR+K
Sbjct: 318 CSCARLGALELGDWAS-NLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKK 374
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/640 (37%), Positives = 368/640 (57%), Gaps = 33/640 (5%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN +I G+AS+G ++ +Y ML G T+ +L V++GR++H +
Sbjct: 129 WNFMIRGYASNGLPMKSLVLYREMLCFG-QRADNFTYPFVLKACGDLLLVEIGRRVHSEV 187
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+ G S ++VG+ L+ MYAK G + A+ FD + E+
Sbjct: 188 VVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAER---------------------- 225
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
D SW TMI+G +N A +F M GL D T +L+AC L
Sbjct: 226 ---------DLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLK 276
Query: 189 ALEEGKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
A++EGK IH + +RN + N F ++L++MYC C + A +F + WK+ VSW +M+
Sbjct: 277 AVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMI 336
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
+GY +NG + E++++F M +G PD T +V+ +C +A+L G H + G
Sbjct: 337 LGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFD 396
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
+ V ALV Y KCG++ S R+F+EM + VSW+A+V+GY G+ E I + + M
Sbjct: 397 ANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGM 456
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
++ + PD +LSACS AGLV +G+ F M KEY ++P HY+CM+D+L RAG
Sbjct: 457 KANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGH 516
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSI 487
L+EA I M P + WA LL++ R+H N+++ + +A+ + +++P +SY+ LS+I
Sbjct: 517 LDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNI 576
Query: 488 YASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKL 547
YA++ +WD V ++R +R KG++K PGCS+I+ + VH F D S ++ IYA+L +L
Sbjct: 577 YAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNEL 636
Query: 548 NRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVC 607
+++ + GY PD S V +DVE K KML HSE+LAIAF L+ PG IR+ KNLRVC
Sbjct: 637 KQQLKEAGYKPDTSLVFYDVEEEVKEKMLWDHSERLAIAFALINTGPGTVIRITKNLRVC 696
Query: 608 SDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
DCH TK IS++T REI++RD RFH F G CSCGD+W
Sbjct: 697 GDCHTVTKLISELTGREIIMRDIHRFHHFIKGFCSCGDYW 736
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 221/451 (49%), Gaps = 41/451 (9%)
Query: 14 SGHASHGSVNDAVKVYNLMLKDGLGN--LSRITFSTMLIMSSSRRCVDLGRQIHGHILKF 71
+ H S G V V+ M + L L+ + +L ++ + G+Q+H H++ F
Sbjct: 29 TSHFSQGDVAQMVERSLSMREHPLQQYPLTSLQCGALLQSFTNTKSFKQGQQLHAHMISF 88
Query: 72 G-FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRL 130
+ ++ + L YA GL+ A+ FD
Sbjct: 89 SILENNTYLNTKLAAFYAGCGLMSQAEVIFD----------------------------- 119
Query: 131 FRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLAL 190
G+ K+S W MI G NGL +++ L+REM G D FT+ VL ACG LL +
Sbjct: 120 --GIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLV 177
Query: 191 EEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGY 250
E G+++H+ ++ + +++VG++L+ MY K + A VF MA +++ SW M+ GY
Sbjct: 178 EIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGY 237
Query: 251 GQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG---RSLVTGLI 307
+N S A +F M + G+ D TL ++S+CA+L +++EG HG R+ +
Sbjct: 238 AKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYN 297
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
F T N+L+ Y C + D+ RLF + +D VSW +++ GYA+ G A E++ LF +M
Sbjct: 298 KFFT--NSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRM 355
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
G PD+VT I VL AC + + G +VK+ G T ++D+ S+ G
Sbjct: 356 ALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKK-GFDANTIVGTALVDMYSKCGS 414
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
L ++ ++MP + W+ +++ +HG
Sbjct: 415 LACSRRVFDEMP-DKSLVSWSAMVAGYGLHG 444
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 176/353 (49%), Gaps = 35/353 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D SWN +ISG+A + A V++LM K GL T +L + + V
Sbjct: 222 MAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGL-FADCTTLLGLLSACADLKAVKE 280
Query: 61 GRQIHGHILKFGFGSY-VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G+ IHG+ ++ G+Y F + L++MY + DA+R F+ + K+ V +N+MI G
Sbjct: 281 GKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYA 340
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
R G ES R LFR M L+G DQ TF +
Sbjct: 341 RNGDAFESLR-------------------------------LFRRMALDGSGPDQVTFIA 369
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL AC + AL G IH+++++ N VG+ALVDMY KC S+ + VF M K+
Sbjct: 370 VLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKS 429
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FH 298
+VSW+AM+ GYG +G EA+ I M+ N + PD+ S++S+C++ + EG + F+
Sbjct: 430 LVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFY 489
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSG 350
+ ++ + +V G+ G++++++ + M ++ W AL++
Sbjct: 490 KMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTA 542
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 187/396 (47%), Gaps = 30/396 (7%)
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMIT-GLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
R L+ + G +D++ S+T+ + G + +ER RE L+ + G+
Sbjct: 7 RCLIAWTPHAILGGRDREYNSFTSHFSQGDVAQMVERSLS--MREHPLQQYPLTSLQCGA 64
Query: 180 VLTACGGLLALEEGKQIHAFIIR-NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
+L + + ++G+Q+HA +I + ++N ++ + L Y C + AE +F + K
Sbjct: 65 LLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLK 124
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
N W M+ GY NG +++ ++ M G D+FT V+ +C +L +E G + H
Sbjct: 125 NSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVH 184
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
+V GL S I V N+L+ Y K G++ + +F+ M RD SW ++SGYAK +
Sbjct: 185 SEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSG 244
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--- 415
+F+ M GL D TL+G+LSAC+ V++G+ ++ Y +R +Y
Sbjct: 245 TAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGK-----VIHGYAVRNSIGNYNKF 299
Query: 416 --TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL--- 470
+I++ + +A+ ++ + D + W +++ +G+ A ESL
Sbjct: 300 FTNSLIEMYCNCNCMVDARRLFERVRW-KDTVSWNSMILGYARNGD------AFESLRLF 352
Query: 471 --LELDPYNPASYVLLSSIYASKGKWDHVSQLRRTM 504
+ LD P ++ + G D ++ LR M
Sbjct: 353 RRMALDGSGPDQVTFIAVL----GACDQIAALRYGM 384
>gi|15240591|ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g13270, chloroplastic; Flags: Precursor
gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana]
gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 752
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 248/647 (38%), Positives = 373/647 (57%), Gaps = 46/647 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
+ VS +IS +A G ++ AV +++ ML G S + ++T+L + R +D GRQI
Sbjct: 148 NAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSM-YTTLLKSLVNPRALDFGRQI 206
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H H+++ G S + + +V+MY K G + AKR FD+
Sbjct: 207 HAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQ---------------------- 244
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
M K ++ T ++ G Q G R+A+ LF ++ EG+ D F F VL AC
Sbjct: 245 ---------MAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKAC 295
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L L GKQIHA + + + V VG+ LVD Y KC S + A F+ + N VSW+
Sbjct: 296 ASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWS 355
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQ-RNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
A++ GY Q EEAVK F +++ +N + FT S+ +C+ LA G Q H ++
Sbjct: 356 AIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIK 415
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
LI +AL+T Y KCG ++D++ +F M+ D V+WTA +SG+A +G A+E + L
Sbjct: 416 RSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRL 475
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
FEKM+S G+KP+ VT I VL+ACS AGLVE+G+H + M+++Y + P DHY CMIDI +
Sbjct: 476 FEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYA 535
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
R+G L+EA F+ MPF PDA+ W LS C H N+E+G+ A E L +LDP + A YVL
Sbjct: 536 RSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVL 595
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
++Y GKW+ +++ + M E+ ++K+ CSWI+ K ++H F D P + +IY +
Sbjct: 596 PFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEK 655
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFI---PPGLPIRV 600
L++ + G+ M + ++E+ + L HSE+LAIAFGL+ + P PI+V
Sbjct: 656 LKEFD------GF---MEGDMFQCNMTERREQLLDHSERLAIAFGLISVHGNAPA-PIKV 705
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLR C DCH K++S +T EI++RD+ RFH FK G+CSC D+W
Sbjct: 706 FKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 204/452 (45%), Gaps = 35/452 (7%)
Query: 10 NLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHIL 69
NL + + H +N+A + M K G+ ++S ++ + R + GR +H +
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMDKAGV-SVSSYSYQCLFEACRELRSLSHGRLLHDRMR 110
Query: 70 KFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRR 129
V + + ++ MY + + DA + FDE+ E N
Sbjct: 111 MGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELN---------------------- 148
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
++S TTMI+ + G+ +A+ LF M G + ++L + A
Sbjct: 149 ---------AVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRA 199
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
L+ G+QIHA +IR N + + +V+MY KC + A+ VF MA K V+ T ++VG
Sbjct: 200 LDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVG 259
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
Y Q G + +A+K+F ++ G+E D F V+ +CA+L L G Q H GL S
Sbjct: 260 YTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESE 319
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
++V LV FY KC + E + R F E+ ++VSW+A++SGY + + E + F+ + S
Sbjct: 320 VSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRS 379
Query: 370 HGLKP-DEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
+ T + ACS G +K I + + +I + S+ G L
Sbjct: 380 KNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGE-SALITMYSKCGCL 438
Query: 429 EEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
++A M PD + W +S +GN
Sbjct: 439 DDANEVFESMD-NPDIVAWTAFISGHAYYGNA 469
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 250/648 (38%), Positives = 366/648 (56%), Gaps = 34/648 (5%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P + VSW LISG A +G + A+ + M ++G+ + TF +S R G
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVP-NDFTFPCAFKAVASLRLPVTG 127
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+QIH +K G VFVG DMY K L DA++ FDE+PE
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPE---------------- 171
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
++ +W I+ + +G REAI+ F E R + TF + L
Sbjct: 172 ---------------RNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFL 216
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
AC L L G Q+H ++R+ +V V + L+D Y KCK I+ +E +F M KN V
Sbjct: 217 NACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAV 276
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW +++ Y QN E+A ++ +++ +E DF + SV+S+CA +A LE G H +
Sbjct: 277 SWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHA 336
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ + I V +ALV YGKCG IEDS + F+EM ++ V+ +L+ GYA G+ + +
Sbjct: 337 VKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMAL 396
Query: 362 DLFEKMLSHGL--KPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
LFE+M G P+ +T + +LSACSRAG VE G F+ M YGI P +HY+C++
Sbjct: 397 ALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIV 456
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L RAG +E A FI KMP P W L ++CR+HG ++G AAE+L +LDP +
Sbjct: 457 DMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSG 516
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
++VLLS+ +A+ G+W + +R ++ G++K G SWI K++VH F A D S + +
Sbjct: 517 NHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKE 576
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
I L KL +M GY PD+ L+D+E EK ++HHSEKLA+AFGLL +P +PIR
Sbjct: 577 IQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIR 636
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ KNLR+C DCH+ K++S +REI+VRD RFH FK+G CSC D+W
Sbjct: 637 ITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 195/411 (47%), Gaps = 41/411 (9%)
Query: 30 NLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILK-FGFGSYVFVGSPLVDMYA 88
+L+ D LG L + S +SS R LGR +H I+K F+ + L++MY+
Sbjct: 2 SLLSADALGLLLKNAIS-----ASSMR---LGRVVHARIVKTLDSPPPPFLANYLINMYS 53
Query: 89 KLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITG 148
KL + PE +R + R ++ +SWT++I+G
Sbjct: 54 KL-----------DHPES--------------------ARLVLRLTPARNVVSWTSLISG 82
Query: 149 LMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDN 208
L QNG A+ F EMR EG+ + FTF A L GKQIHA ++ +
Sbjct: 83 LAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILD 142
Query: 209 VFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR 268
VFVG + DMYCK + A +F + +N+ +W A + +G EA++ F +R
Sbjct: 143 VFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRR 202
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIED 328
P+ T + +++C++ L G Q HG L +G + ++V N L+ FYGKC I
Sbjct: 203 IDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRS 262
Query: 329 SHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
S +F EM ++ VSW +LV+ Y + + + L+ + ++ + + VLSAC+
Sbjct: 263 SEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAG 322
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP 439
+E GR VK R I + ++D+ + G +E+++ ++MP
Sbjct: 323 MAGLELGRSIHAHAVKACVERTIFVG-SALVDMYGKCGCIEDSEQAFDEMP 372
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 247/653 (37%), Positives = 373/653 (57%), Gaps = 40/653 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V+WN +++G+A HG +D + LM D N S T +L + + +
Sbjct: 190 MPARDVVAWNAMLAGYALHGKYSDTIACLLLMQDDHAPNAS--TLVALLPLLAQHGALSQ 247
Query: 61 GRQIHGHILK----FGFGSYVFVGSPLVDMYAKLG-LIYDAKRGFDELPEKNIVMYNTMI 115
GR +H + ++ V VG+ L+DMYAK G L+Y
Sbjct: 248 GRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVY--------------------- 286
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLA-MDQ 174
+ R+F M ++ ++W+ ++ G + G EA LF++M +GL +
Sbjct: 287 -----------ASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSP 335
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
+ S L AC L L GKQ+HA + ++ ++ G++L+ MY K I A ++F
Sbjct: 336 TSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQ 395
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
M K+ VS++A++ GY QNG ++EA ++F MQ ++PD T+ S+I +C++LA+L+ G
Sbjct: 396 MVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHG 455
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
HG +V G+ S ++ NAL+ Y KCG I+ S ++F+ M RD VSW +++GY
Sbjct: 456 KCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIH 515
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G E LF M +PD+VT I ++SACS +GLV +G+ +F +M +YGI P +H
Sbjct: 516 GLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEH 575
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
Y M+D+L+R G L+EA FI MP D W LL +CR+H N+++GK + + +L
Sbjct: 576 YIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLG 635
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS 534
P ++VLLS+I+++ G++D +++R +E+G +K PGCSWI+ +H F D S
Sbjct: 636 PEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSLHAFIGGDRSH 695
Query: 535 PYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPP 594
S +IY EL+ + + K GY D S VL DVE EK K L +HSEKLAIAFG+L +
Sbjct: 696 AQSSEIYQELDNILVDINKLGYRADTSFVLQDVEEEEKEKALLYHSEKLAIAFGVLTLSE 755
Query: 595 GLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
I V KNLRVC DCH KY++ + +R I+VRDA RFH FKNG+CSCGDFW
Sbjct: 756 DKTIFVTKNLRVCGDCHTVIKYMTLVRKRAIIVRDANRFHHFKNGQCSCGDFW 808
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 132/438 (30%), Positives = 225/438 (51%), Gaps = 48/438 (10%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
TF +L S+ + R +H H + G + +FV + LVD+YAK A F +
Sbjct: 131 TFPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRM 190
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
P +++V +N M+ G G ++ M+D + + +T++ L
Sbjct: 191 PARDVVAWNAMLAGYALHGKYSDTIACLLLMQDDHAPNASTLVALL-------------- 236
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIR----NDHKDNVFVGSALVDMY 219
+L G AL +G+ +HA+ +R +DHKD V VG+AL+DMY
Sbjct: 237 ---------------PLLAQHG---ALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMY 278
Query: 220 CKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG---IEPDDF 276
KC + YA VF MA +N V+W+A++ G+ G EA +F +M G + P
Sbjct: 279 AKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPT-- 336
Query: 277 TLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
++ S + +CANL+ L G Q H +GL + +T N+L++ Y K G I+ + LF++M
Sbjct: 337 SVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQM 396
Query: 337 NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR 396
V+D VS++ALVSGY + GKA+E +F KM + ++PD T++ ++ ACS ++ G+
Sbjct: 397 VVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGK 456
Query: 397 -HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCR 455
+ ++V+ GI +ID+ ++ GR++ ++ + MP D + W T+++
Sbjct: 457 CGHGSVIVR--GIASETSICNALIDMYAKCGRIDLSRQIFDVMP-ARDIVSWNTMIAGYG 513
Query: 456 IHGNVEIGKWAAESLLEL 473
IHG +GK A L++
Sbjct: 514 IHG---LGKEATALFLDM 528
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 152/299 (50%), Gaps = 17/299 (5%)
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
+ +TF VL AC LL L + +H R ++FV +ALVD+Y KC S ++A +VF
Sbjct: 128 NNYTFPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVF 187
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
R M ++VV+W AML GY +G + + MQ + P+ TL +++ A +L
Sbjct: 188 RRMPARDVVAWNAMLAGYALHGKYSDTIACLLLMQDDH-APNASTLVALLPLLAQHGALS 246
Query: 293 EGTQFHGRSLVTGLI----SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
+G H S+ + + V AL+ Y KCG++ + R+F M VR+EV+W+ALV
Sbjct: 247 QGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALV 306
Query: 349 SGYAKFGKANETIDLFEKMLSHG---LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE 405
G+ G+ E LF+ ML+ G L P V L AC+ + G+ ++ K
Sbjct: 307 GGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVA--SALRACANLSDLCLGKQLHALLAKS 364
Query: 406 YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
G+ ++ + ++AG +++A + ++M D + ++ L+S G V+ GK
Sbjct: 365 -GLHTDLTAGNSLLSMYAKAGLIDQATTLFDQM-VVKDTVSYSALVS-----GYVQNGK 416
>gi|449434268|ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
gi|449533166|ref|XP_004173548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
Length = 712
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 248/640 (38%), Positives = 378/640 (59%), Gaps = 12/640 (1%)
Query: 9 WNLLISGHASHGSVNDAVKV-YNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
+ ++I G+A G + DA+K+ Y + +KD I++++ML +C DL + +
Sbjct: 84 YTMMIGGYADEGRLEDALKLFYEMPVKD------LISWNSML--KGCLKCGDL--TMACN 133
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
+ V + +++ + G + A+ F +P K++ +N+M+ G G VE++
Sbjct: 134 MFDKMSERNVVSWTTIINGLLEFGRVEVAECLFRVMPTKDVTAWNSMVHGFFSNGRVEDA 193
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
LF M +++ ISWT++I GL NG EA+ +F +M L T LTAC +
Sbjct: 194 IELFEKMPNRNVISWTSVIGGLDHNGRSFEALVVFHKM-LASFKATSSTLACALTACANI 252
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
G QIH I++ + N ++ ++L+ Y CK I A S+F +NVV WTA+L
Sbjct: 253 CTPFIGVQIHGLIVKTGYCFNEYISASLISFYANCKLIDNASSIFNDNVSRNVVVWTALL 312
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
GYG N +A+++F M R + P+ +L S ++SC L +++ G + H + GL
Sbjct: 313 TGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSCCGLEAVDRGREVHAVAHKLGLE 372
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
S I VSN+LV Y KCG+I D +F M+ ++ VSW +++ G A+ G + LF +M
Sbjct: 373 SDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQM 432
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
+ + PDE+TL G+LSAC +G++ KGR +F+ K +GI ++HY+ M+D+L R G+
Sbjct: 433 IRTRVDPDEITLAGLLSACGHSGMLTKGRCFFKHFGKNFGIEMTNEHYSSMVDLLGRYGQ 492
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSI 487
LEEA++ I+ MP + + W LLSS H NV + + AA+ +L+L P A+Y LLS++
Sbjct: 493 LEEAEALIHIMPGKANYMVWLALLSSSINHSNVHVAERAAKCVLDLQPNCSAAYTLLSNL 552
Query: 488 YASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKL 547
YAS GKW VS++R+ M+++G+ K PG SWI K H F + D S P S +IY +LE L
Sbjct: 553 YASTGKWTEVSKIRKKMKDEGILKQPGSSWITIKGIKHNFISGDQSHPLSRKIYQKLEWL 612
Query: 548 NRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVC 607
K+ + GYVPD HDVE +K +ML++HSE+LAI FGL+ G I V+KNLR+C
Sbjct: 613 GGKLKELGYVPDPKFSFHDVETEQKEEMLSYHSERLAIGFGLISTVEGSTIIVMKNLRIC 672
Query: 608 SDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
DCHNA K SK+ REI+VRD RFH F NG CSCGD+W
Sbjct: 673 GDCHNAVKLTSKVVGREIVVRDPSRFHHFHNGTCSCGDYW 712
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 197/405 (48%), Gaps = 20/405 (4%)
Query: 67 HILKFGFGSYVFVGSP----LVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
+I FG + +P L+ + + G I +A+ F+++ + +Y MI G G
Sbjct: 36 YICLFGTKKLSILTTPPSNYLLSFHLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEG 95
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
+E++ +LF M KD ISW +M+ G ++ G A ++F +M + S T
Sbjct: 96 RLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLTMACNMFDKMSERNVV-------SWTT 148
Query: 183 ACGGLLALEEGK-QIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
GL LE G+ ++ + R +V +++V + ++ A +F M +NV+
Sbjct: 149 IINGL--LEFGRVEVAECLFRVMPTKDVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVI 206
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SWT+++ G NG S EA+ +F M + + TL +++CAN+ + G Q HG
Sbjct: 207 SWTSVIGGLDHNGRSFEALVVFHKMLAS-FKATSSTLACALTACANICTPFIGVQIHGLI 265
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ TG +S +L++FY C I+++ +FN+ R+ V WTAL++GY + + +
Sbjct: 266 VKTGYCFNEYISASLISFYANCKLIDNASSIFNDNVSRNVVVWTALLTGYGLNCRHTDAL 325
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
+F+ M+ + P++ +L L++C V++GR + K G+ ++ +
Sbjct: 326 QVFKGMMRMSVLPNQSSLTSALNSCCGLEAVDRGREVHAVAHK-LGLESDIFVSNSLVVM 384
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWA 466
++ G + + + +M + + W +++ C HG G+WA
Sbjct: 385 YTKCGHINDGIAVFTRMS-RKNVVSWNSIIVGCAQHG---FGRWA 425
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 180/382 (47%), Gaps = 66/382 (17%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLM----------LKDGLGNLSR-----ITF 45
MP D +WN ++ G S+G V DA++++ M + GL + R + F
Sbjct: 169 MPTKDVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALVVF 228
Query: 46 STML----IMSSSRRCV----------DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLG 91
ML SS+ C +G QIHG I+K G+ ++ + L+ YA
Sbjct: 229 HKMLASFKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYANCK 288
Query: 92 LIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQ 151
LI +A F++ +N+V++ T ++TG
Sbjct: 289 LIDNASSIFNDNVSRNVVVW-------------------------------TALLTGYGL 317
Query: 152 NGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFV 211
N +A+ +F+ M + +Q + S L +C GL A++ G+++HA + + ++FV
Sbjct: 318 NCRHTDALQVFKGMMRMSVLPNQSSLTSALNSCCGLEAVDRGREVHAVAHKLGLESDIFV 377
Query: 212 GSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGI 271
++LV MY KC I +VF M+ KNVVSW +++VG Q+G A+ +F M R +
Sbjct: 378 SNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIRTRV 437
Query: 272 EPDDFTLGSVISSCANLASLEEGTQF---HGRSLVTGLISFITVSNALVTFYGKCGNIED 328
+PD+ TL ++S+C + L +G F G++ G+ +++V G+ G +E+
Sbjct: 438 DPDEITLAGLLSACGHSGMLTKGRCFFKHFGKNF--GIEMTNEHYSSMVDLLGRYGQLEE 495
Query: 329 SHRLFNEMNVR-DEVSWTALVS 349
+ L + M + + + W AL+S
Sbjct: 496 AEALIHIMPGKANYMVWLALLS 517
>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
Length = 652
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/642 (37%), Positives = 365/642 (56%), Gaps = 34/642 (5%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
SW ++++ A + + + ML G+ N + S L + R + +GR I
Sbjct: 43 SWTMMLAAFAENRDFDRCWLFFRGMLLQGI-NPGEVGISIFLSACTDAREITIGRSIQLA 101
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
IL G V + LV +Y KLG DA
Sbjct: 102 ILGTGIEEESIVQTALVSLYGKLGHCTDAAS----------------------------- 132
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
+F M +D ++W+ M+ +NG REA+ LFR+M L+G+A ++ T S L AC L
Sbjct: 133 --VFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASL 190
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
L G +H + + V VG+ALV++Y KC I+ A F + KNVV+W+A+
Sbjct: 191 GDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAIS 250
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR--SLVTG 305
Y +N + +A+++ M G+ P+ T SV+ +CA +A+L++G + H R L G
Sbjct: 251 AAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGG 310
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
L S + V ALV Y KCGN+ + +F+++ D V W +L++ A+ G+ + ++LFE
Sbjct: 311 LESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFE 370
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
+M GL+P +T VL ACS AG++++GR +F + ++GI P +H+ CM+D+L RA
Sbjct: 371 RMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRA 430
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
G + +++ + MPF P + W L +CR + N++ WAAE+L +LDP A YVLLS
Sbjct: 431 GWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPRKRAPYVLLS 490
Query: 486 SIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELE 545
++YA G+W V+++R+ M+ K+ G SWI+ K RVH F + D P +I+AEL+
Sbjct: 491 NMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQ 550
Query: 546 KLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
+L + M GYVPD VLHDV+ K M+ +HSEKLA+AF LL P G PIRVVKNLR
Sbjct: 551 RLTKLMKAAGYVPDTEMVLHDVKQEVKETMVGYHSEKLAMAFALLTTPEGSPIRVVKNLR 610
Query: 606 VCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VC+DCH A+K+ISK+ REI+VRD RFH F+NG CSCGD+W
Sbjct: 611 VCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 652
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 188/385 (48%), Gaps = 3/385 (0%)
Query: 106 KNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM 165
+N + N +I + +++ +F G++ K+ SWT M+ +N FR M
Sbjct: 8 RNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGM 67
Query: 166 RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI 225
L+G+ + L+AC + G+ I I+ ++ V +ALV +Y K
Sbjct: 68 LLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHC 127
Query: 226 KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
A SVF M+ ++VV+W+AM+ Y +NG EA+ +F M +G+ P+ TL S + +C
Sbjct: 128 TDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDAC 187
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
A+L L G H R G+ S + V ALV YGKCG IE + F ++ ++ V+W+
Sbjct: 188 ASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWS 247
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE-IMVK 404
A+ + YA+ + + I + +M GL P+ T + VL AC+ +++GR E I V
Sbjct: 248 AISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVL 307
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
G+ T ++++ S+ G L A + +K+ D + W +L+++ HG E
Sbjct: 308 GGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAH-LDLVLWNSLIATNAQHGQTEKAL 366
Query: 465 WAAESLLELDPYNPASYVLLSSIYA 489
E + L+ P S ++A
Sbjct: 367 ELFER-MRLEGLQPTIITFTSVLFA 390
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 196/418 (46%), Gaps = 46/418 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D V+W+ +++ +A +G +A+ ++ M DG+ +++T + L +S +
Sbjct: 137 MSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAP-NKVTLVSGLDACASLGDLRS 195
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +H + G S V VG+ LV++Y K G I A F ++ EKN+V
Sbjct: 196 GALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVV----------- 244
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+W+ + +N R+AI + M LEGLA + TF SV
Sbjct: 245 --------------------AWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSV 284
Query: 181 LTACGGLLALEEGKQIHA--FIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
L AC + AL++G++IH ++ + +V+V +ALV+MY KC ++ A ++F +A
Sbjct: 285 LDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHL 344
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
++V W +++ Q+G +E+A+++F M+ G++P T SV+ +C++ L++G + H
Sbjct: 345 DLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRK-H 403
Query: 299 GRSLVT--GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE-VSWTALVSGYAKFG 355
S + G+ +V G+ G I DS L M V+W A + +
Sbjct: 404 FVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYR 463
Query: 356 KANETIDLFEKMLSHGLKPDE----VTLIGVLSACSRAGLVEKGRHYFEIM--VKEYG 407
+ I E + L P + V L + + R V + R ++ VKE G
Sbjct: 464 NMDGAIWAAENLFQ--LDPRKRAPYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAG 519
>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Brachypodium distachyon]
Length = 631
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/604 (38%), Positives = 352/604 (58%), Gaps = 31/604 (5%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
S L + + R+ + +G+ HG + FG + + L+++Y K G A+ FD +
Sbjct: 59 AISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIM 118
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
++IV SW TMI G +G + +A+ LF
Sbjct: 119 HVRSIV-------------------------------SWNTMIAGYTHSGEDVQALKLFS 147
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
M EG M +FT S + AC A+ E KQ+H ++ N FVG+A++D+Y KC
Sbjct: 148 RMHREGTHMSEFTLSSTICACAAKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCN 207
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
IK A VF M + +V+W+++ GY QNG EEA+ +F QR G+E +FTL +++S
Sbjct: 208 MIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILS 267
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+CA+LA EG Q H L G V+ +LV Y +CG IE ++ LF M ++ V
Sbjct: 268 ACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVI 327
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
W A+++ +++ + E + LFEKM G+ P+EVT + VLS CS AGLVEKGRHYF +++
Sbjct: 328 WNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLM 387
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
+ + P HY+CM+D+L R+G+ +EA +NKMPF P A W +LL SCR + N+ +
Sbjct: 388 SDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTASMWGSLLGSCRNYNNIRLA 447
Query: 464 KWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSR 523
+ AAE L +L+P N ++VLLS++YA+ G W++V R+ +++ G +K+ G SWI+ K +
Sbjct: 448 RIAAEQLFQLEPDNGGNHVLLSNVYAASGNWENVLMARKYLKDSGAKKEMGRSWIEAKGK 507
Query: 524 VHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKL 583
VH+F + P IY +LE++ +M K + LHDV +K ++L HHSEKL
Sbjct: 508 VHVFVVGERKHPRITDIYNKLEEIYHEMRKFARRTSIECDLHDVHAEQKEELLKHHSEKL 567
Query: 584 AIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSC 643
A++FGL+ +P +PI + KNLR+C DCH+ K + IT+R ++VRD RFH FK+G CSC
Sbjct: 568 ALSFGLISLPSNIPIIIHKNLRICGDCHSFMKIAAHITERLVIVRDTNRFHHFKDGSCSC 627
Query: 644 GDFW 647
GDFW
Sbjct: 628 GDFW 631
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 192/375 (51%), Gaps = 44/375 (11%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSWN +I+G+ G A+K+++ M ++G ++S T S+ + +++ ++ +Q+H
Sbjct: 124 VSWNTMIAGYTHSGEDVQALKLFSRMHREG-THMSEFTLSSTICACAAKYAINECKQLHT 182
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
LK S FVG+ ++D+YAK +I DA F+++PE+ +V ++++ G ++ GL E
Sbjct: 183 IALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHE- 241
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
EA+ LFR + EG+ + +FT ++L+AC
Sbjct: 242 ------------------------------EALHLFRCAQREGVELTEFTLSAILSACAS 271
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L EG Q+HA I++ N FV ++LVD+Y +C I+ A ++F M KNVV W AM
Sbjct: 272 LALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAM 331
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG-----RS 301
+ + ++ S EA+ +F MQ+ GI P++ T SV+S C++ +E+G + R+
Sbjct: 332 IASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRT 391
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKANET 360
+ ++ + + +V G+ G +++ L N+M S W +L+ +
Sbjct: 392 VEPNVLHY----SCMVDVLGRSGKTDEAWELLNKMPFEPTASMWGSLLGSCRNYNNIRLA 447
Query: 361 IDLFEKMLSHGLKPD 375
E++ L+PD
Sbjct: 448 RIAAEQLFQ--LEPD 460
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 144/310 (46%), Gaps = 6/310 (1%)
Query: 163 REMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC 222
R R++ +D L C +L GK H I + + L+++Y KC
Sbjct: 46 RLARIDRNLIDVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKC 105
Query: 223 KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
A VF M +++VSW M+ GY +G +A+K+F M R G +FTL S I
Sbjct: 106 GRNDCARLVFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTI 165
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
+CA ++ E Q H +L L S V A++ Y KC I+D+ +F +M R V
Sbjct: 166 CACAAKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLV 225
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
+W++L +GY + G E + LF G++ E TL +LSAC+ L +G ++
Sbjct: 226 TWSSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVI 285
Query: 403 VKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
+K G ++D+ +R G++E+A + M + + W +++S H +
Sbjct: 286 LK-CGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEH-KNVVIWNAMIASFSRHAH--- 340
Query: 463 GKWAAESLLE 472
W A L E
Sbjct: 341 -SWEAMILFE 349
>gi|222626043|gb|EEE60175.1| hypothetical protein OsJ_13106 [Oryza sativa Japonica Group]
Length = 628
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/558 (40%), Positives = 346/558 (62%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
RQ+H G + F + L+ YA LG + A+ F+ +P +N++ +N + G ++
Sbjct: 61 RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKN 120
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G + +R+LF M +++ +W M+ GL G + E++ F +MR EG+ D+F GSV
Sbjct: 121 GDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVF 180
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
C GL + G+Q+HA+++R+ ++ VGS+L MY +C ++ E+V R + ++V
Sbjct: 181 RCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIV 240
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
S ++ G QNG SE A++ FC M+ G+ D T S ISSC++LA+L +G Q HG+
Sbjct: 241 SCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQV 300
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ G+ + V LV Y +CG + DS R+F D +A++S Y G + I
Sbjct: 301 MKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAI 360
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
+LF++M++ G +P +VT + +L ACS +GL E+G FE+M K YG++P HYTC++D+
Sbjct: 361 ELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDL 420
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
L R+G L+EA++ I MP PD + W TLLS+C+ N ++ + A+ ++ELDP++ ASY
Sbjct: 421 LGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASY 480
Query: 482 VLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIY 541
VLLS+I A+ +W VS++R+ MR+ VRK+PG SW++ K +H F D S P +I
Sbjct: 481 VLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEID 540
Query: 542 AELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVV 601
LE++ K+ + GY PDMS VLHD+E EK L+HHSEKLAIAF L +P G+PIRV+
Sbjct: 541 ECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVM 600
Query: 602 KNLRVCSDCHNATKYISK 619
KNLRVC DCH A K +S+
Sbjct: 601 KNLRVCDDCHLAIKLMSQ 618
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 170/377 (45%), Gaps = 38/377 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +WN +++G + G +++ + M ++G+ + ++ + R V
Sbjct: 133 MPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGM-HPDEFGLGSVFRCCAGLRDVVT 191
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H ++++ G + VGS L MY + G + + + LP +IV N
Sbjct: 192 GRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCN-------- 243
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
T+I G QNG A++ F MR G+A D TF S
Sbjct: 244 -----------------------TIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSA 280
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+++C L AL +G+QIH +++ V V + LV MY +C + +E VF +
Sbjct: 281 ISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDT 340
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
+AM+ YG +G ++A+++F M G EP D T +++ +C++ EEG F
Sbjct: 341 FLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFEL 400
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKAN 358
+ G+ + +V G+ G ++++ L M + D V W L+S K
Sbjct: 401 MTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSAC----KTQ 456
Query: 359 ETIDLFEKMLSHGLKPD 375
+ D+ E++ ++ D
Sbjct: 457 KNFDMAERIAKRVIELD 473
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 127/287 (44%), Gaps = 35/287 (12%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
F + AC L L +Q+HAF + + F + L+ Y + A +F +
Sbjct: 47 FSHLFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 103
Query: 237 WKNVVSWTAMLVGYGQN-------------------------------GCSEEAVKIFCN 265
+NV+SW + GY +N G EE++ F +
Sbjct: 104 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLD 163
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M+R G+ PD+F LGSV CA L + G Q H + +GL + V ++L Y +CG
Sbjct: 164 MRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGC 223
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+++ + + VS +++G + G + ++ F M S G+ D VT + +S+
Sbjct: 224 LQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISS 283
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAK 432
CS + +G+ ++K G+ + TC++ + SR G L +++
Sbjct: 284 CSDLAALAQGQQIHGQVMKA-GVDKVVPVMTCLVHMYSRCGCLGDSE 329
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 145/365 (39%), Gaps = 71/365 (19%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P VS N +I+G +G A++ + +M G+ +TF + + S +
Sbjct: 234 LPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAA-DVVTFVSAISSCSDLAALAQ 292
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIHG ++K G V V + LV MY++ G + D
Sbjct: 293 GQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGD------------------------- 327
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
S R+F G D+ + MI+ +G ++AI+LF++M G TF ++
Sbjct: 328 ------SERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLAL 381
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC EEG + + Y S+K+
Sbjct: 382 LYACSHSGLKEEGMDCFELMTKT---------------YGMQPSVKH------------- 413
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+T ++ G++GC +EA + +M + PD +++S+C + + + R
Sbjct: 414 --YTCVVDLLGRSGCLDEAEALILSMP---LTPDGVIWKTLLSACKTQKNFDMAERIAKR 468
Query: 301 SLVTGL---ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE--VSWTALVSGYAKFG 355
+ S++ +SN T + G++ + + + NVR E VSW L +F
Sbjct: 469 VIELDPHDSASYVLLSNIRATSR-RWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFC 527
Query: 356 KANET 360
+E+
Sbjct: 528 TGDES 532
>gi|302820671|ref|XP_002992002.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
gi|300140244|gb|EFJ06970.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
Length = 620
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 233/611 (38%), Positives = 365/611 (59%), Gaps = 5/611 (0%)
Query: 42 RITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFD 101
++ F L ++ +D GRQIH ++ G S + + + LV+MY K + A++ FD
Sbjct: 10 KVVFVIALDACAASGELDHGRQIHSSVVDSGLTSNIIISNSLVNMYGKCQDVPCAEKVFD 69
Query: 102 ELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDL 161
+ +++V + M+ + G ++ +F M KD +SW +I + N ++A++L
Sbjct: 70 GMLLRDVVSWTAMLAVYAQNGCWSQALHVFEAMPRKDDVSWNAVINASVGNSKFQDALEL 129
Query: 162 FREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDN-VFVGSALVDMYC 220
F M LEGL ++FT S+L ACGGL L+ +QIHA N VG+++V+MY
Sbjct: 130 FHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYA 189
Query: 221 KCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ--NGCSEEAVKIFCNMQRNGIEPDDFTL 278
+C S+ + F ++ K +V+W+ ML Y Q +G A K F M+ GI+P + T
Sbjct: 190 RCGSLLDTKKAFDSLEEKGLVAWSIMLAAYAQSKDGSGRRAFKFFQEMEAEGIKPGEVTF 249
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLI-SFITVSNALVTFYGKCGNIEDSHRLFNEMN 337
S + +CA +A+LE G H R+ +G + + + + N ++ YGKCG+ D+ +F++M
Sbjct: 250 VSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMP 309
Query: 338 VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH 397
+ +SW +L+ YA G A E + ++ML G PD T + +L S AGL+E+G
Sbjct: 310 EKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVE 369
Query: 398 YFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF-PPDAIGWATLLSSCRI 456
+F ++++G+ P C++D+L+R G L+ A+ I P D I W TLL++C+
Sbjct: 370 HFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLAACKS 429
Query: 457 HGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCS 516
+G+ + G AE + EL+P + S+V+L+++YAS G+W S++R+ M V+K+PGCS
Sbjct: 430 YGDPQRGIRCAERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKMMERMSVKKEPGCS 489
Query: 517 WIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKML 576
WI+ VH F + + P +I ELEKL +M + GYVPD ++V+HDVE +K ++L
Sbjct: 490 WIELSGSVHEFISGESKHPKIREICEELEKLTLRMREAGYVPDTTNVVHDVEEGDKEEIL 549
Query: 577 NHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLF 636
+ HSE+LAI FGL+ PG IRVVKNLRVCSDCH ATK IS + REI+VRD+ RFH F
Sbjct: 550 SRHSERLAIVFGLMSTRPGETIRVVKNLRVCSDCHAATKIISSVVGREIVVRDSSRFHHF 609
Query: 637 KNGECSCGDFW 647
K+G+CSCGDFW
Sbjct: 610 KHGQCSCGDFW 620
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 179/386 (46%), Gaps = 37/386 (9%)
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M+ EG D+ F L AC L+ G+QIH+ ++ + N+ + ++LV+MY KC+
Sbjct: 1 MQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSVVDSGLTSNIIISNSLVNMYGKCQD 60
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR---------------- 268
+ AE VF M ++VVSWTAML Y QNGC +A+ +F M R
Sbjct: 61 VPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALHVFEAMPRKDDVSWNAVINASVGN 120
Query: 269 ---------------NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFIT-V 312
G+ ++FTL S++ +C L L+ Q H R+ G T V
Sbjct: 121 SKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAV 180
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA--KFGKANETIDLFEKMLSH 370
N++V Y +CG++ D+ + F+ + + V+W+ +++ YA K G F++M +
Sbjct: 181 GNSVVNMYARCGSLLDTKKAFDSLEEKGLVAWSIMLAAYAQSKDGSGRRAFKFFQEMEAE 240
Query: 371 GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEE 430
G+KP EVT + L AC+ +E GR + +I++ + G +
Sbjct: 241 GIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSD 300
Query: 431 AKSFINKMPFPPDAIGWATLLSSCRIHGN-VEIGKWAAESLLE-LDPYNPASYVLLSSIY 488
AK ++MP I W +L+ + +G+ +E E LL+ DP + S +L +
Sbjct: 301 AKLVFDQMP-EKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLS 359
Query: 489 ASKGKWDHVSQLRRTMREKGVRKDPG 514
+ V R ++++ G+ G
Sbjct: 360 HAGLLERGVEHFRSSIQDHGLEPSSG 385
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 169/382 (44%), Gaps = 43/382 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN +I+ + DA+++++ M +GL + + T ++L + L
Sbjct: 102 MPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRS-NEFTLLSLLEACGGLEDLKL 160
Query: 61 GRQIH-GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
RQIH G+ VG+ +V+MYA+ G + D K+ FD L EK +V
Sbjct: 161 ARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDTKKAFDSLEEKGLV---------- 210
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQ--NGLEREAIDLFREMRLEGLAMDQFTF 177
+W+ M+ Q +G R A F+EM EG+ + TF
Sbjct: 211 ---------------------AWSIMLAAYAQSKDGSGRRAFKFFQEMEAEGIKPGEVTF 249
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFV-GSALVDMYCKCKSIKYAESVFRTMA 236
S L AC + LE G+ +H + + V G+ +++MY KC S A+ VF M
Sbjct: 250 VSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMP 309
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
K ++SW +++V Y NG + EA+ M G +PD T S++ ++ LE G +
Sbjct: 310 EKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVE 369
Query: 297 FHGRSLVT--GLISFITVSNALVTFYGKCGNIEDSHRLF--NEMNVRDEVSWTALVSGYA 352
H RS + GL LV + G ++ + L + D ++W L++
Sbjct: 370 -HFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLAACK 428
Query: 353 KFGKANETIDLFEKMLSHGLKP 374
+G I E++ L+P
Sbjct: 429 SYGDPQRGIRCAERVFE--LEP 448
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/587 (37%), Positives = 349/587 (59%), Gaps = 32/587 (5%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
R IH H+ + F+ + L+ MY K G + DA+ FD++P +++V
Sbjct: 79 ARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSRDVV----------- 127
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SWT +I G QN + EAI L +M + FTF S+
Sbjct: 128 --------------------SWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSL 167
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A G G+Q+HA ++ + ++V+VGSAL+DMY +C+ + A VF + KN
Sbjct: 168 LKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNE 227
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW A++ G+ + E + F MQRNG FT S+ S+ A + +LE+G H
Sbjct: 228 VSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAH 287
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ +G V N ++ Y K G++ D+ ++F+ M+ RD V+W +++ A++G E
Sbjct: 288 LIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEA 347
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ FE++ G++ +++T + VL+ACS GLV++G+HYF++M K+Y ++P DHY +D
Sbjct: 348 VAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMM-KDYNVQPEIDHYVSFVD 406
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG L+EA F+ KMP P A W LL +CR+H N ++G++AA+ + ELDP +
Sbjct: 407 LLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGP 466
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
VLL +IYAS GKW+ +++R+ M+ GV+K+P CSW++ ++ VH+F ADD + P S I
Sbjct: 467 PVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDI 526
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y E++N ++ K GYVP+ + VL + E+ L +HSEK+A+AF L+ +P G IR+
Sbjct: 527 YRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGASIRI 586
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+KN+R+C DCH+A KY+SK+ +REI+VRD RFH F G CSCGD+W
Sbjct: 587 MKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 633
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 151/304 (49%), Gaps = 5/304 (1%)
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
LA + S++ AC L + IHA + R+ + F+ ++L+ MYCKC ++ A
Sbjct: 56 LAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDAR 115
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
VF M ++VVSWT ++ GY QN EA+ + +M R P+ FT S++ +
Sbjct: 116 HVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACG 175
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
G Q H ++ + V +AL+ Y +C ++ + +F+ + ++EVSW AL++
Sbjct: 176 GCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIA 235
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
G+A+ T+ F +M +G T + SA +R G +E+GR ++K G +
Sbjct: 236 GFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKS-GQK 294
Query: 410 PIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAES 469
M+ + +++G + +A+ ++M D + W T+L++ +G +GK A
Sbjct: 295 LTAFVGNTMLGMYAKSGSMVDARKVFDRMD-KRDLVTWNTMLTALAQYG---LGKEAVAH 350
Query: 470 LLEL 473
E+
Sbjct: 351 FEEI 354
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 148/297 (49%), Gaps = 32/297 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSW LI+G+A + +A+ + ML+ + TF+++L + + +
Sbjct: 121 MPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARF-RPNGFTFTSLLKATGACGGCSI 179
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+H +K+ + V+VGS L+DMYA+ + A FD L KN V +N +I G R
Sbjct: 180 GEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFAR 239
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ E T LM+ F EM+ G FT+ S+
Sbjct: 240 KADGE---------------------TTLMK----------FAEMQRNGFGATHFTYSSM 268
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+A + ALE+G+ +HA +I++ K FVG+ ++ MY K S+ A VF M +++
Sbjct: 269 FSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDL 328
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
V+W ML Q G +EAV F +++ GI+ + T SV+++C++ ++EG +
Sbjct: 329 VTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHY 385
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 102/201 (50%), Gaps = 38/201 (18%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSWN LI+G A + + M ++G G + T+S+M + ++ GR +H
Sbjct: 228 VSWNALIAGFARKADGETTLMKFAEMQRNGFG-ATHFTYSSMFSAFARIGALEQGRWVHA 286
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
H++K G FVG+ ++ MYAK G + DA++ FD + ++++V +NTM+
Sbjct: 287 HLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTML----------- 335
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC-- 184
T L Q GL +EA+ F E+R G+ ++Q TF SVLTAC
Sbjct: 336 --------------------TALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSH 375
Query: 185 GGLLALEEGKQIHAFIIRNDH 205
GGL ++EGK H F + D+
Sbjct: 376 GGL--VKEGK--HYFDMMKDY 392
>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 793
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 246/654 (37%), Positives = 378/654 (57%), Gaps = 46/654 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTML--IMSSSRRCVDLGR 62
D VSWN LI+G+A G+ + +K+ M GL L+ T + L + V G+
Sbjct: 175 DNVSWNSLITGYARVGAYEEMLKLLVKMHHTGL-RLNAFTLGSALKSCYLNLNNMVSYGK 233
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
+HG+ +K G + VG+ L+DMYAK G + DA + F P +N+
Sbjct: 234 TLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNV-------------- 279
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNG-----LEREAIDLFREMRLEGLAMDQFTF 177
+ + MI G +Q EA+ LF +M+ +G+ FTF
Sbjct: 280 -----------------VMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTF 322
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
S++ C + A E GKQIHA I +++ + + F+GS L+++Y S + F +
Sbjct: 323 SSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPK 382
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
++VSWT M+ GY QNG E A+ +F + +G +PD+F + +++S+CA++A+ G Q
Sbjct: 383 LDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQV 442
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
HG ++ TG+ + V N+ ++ Y K GN++ + F E+ D VSW+ ++ A+ G A
Sbjct: 443 HGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHA 502
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
+ I+LFE M S+G+ P+++T +GVL+ACS GLVE+G Y+E M K+Y ++ H TC
Sbjct: 503 KDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTC 562
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
++D+LSRAGRL +AK+FI F + W TLLS CRI+ ++ GK AE L+ELDP
Sbjct: 563 IVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCRIYKDIVTGKHVAEKLIELDPQE 622
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
+SYVLL +IY G +++R M+++G+RK+PG SWI+ + VH F D S P S
Sbjct: 623 SSSYVLLYNIYTDAGIDLPATKIRELMKDRGIRKEPGQSWIEVGNEVHSFVVGDISHPMS 682
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEK----IKMLNHHSEKLAIAFGLLFIP 593
IY +LE + K K GY+ + +V +S K +NHHSEKLA++FG++ +P
Sbjct: 683 QIIYKKLEGMLEKKRKIGYIDQK---IQNVTISTKEVKGTLGVNHHSEKLAVSFGIVSLP 739
Query: 594 PGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
P P++V+KNLRVC DCH K IS + +REI++RD++RFH FK G CSC D+W
Sbjct: 740 PSAPVKVMKNLRVCHDCHATMKLISVVEKREIILRDSLRFHHFKEGSCSCNDYW 793
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 203/429 (47%), Gaps = 40/429 (9%)
Query: 40 LSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRG 99
L + ++ ++ SS G+ H H++K F +F+ + +++Y+K G + +A++
Sbjct: 7 LDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKL 66
Query: 100 FDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAI 159
FD + E+++ IS+ +I+G G +AI
Sbjct: 67 FDRMSERSV-------------------------------ISYNILISGYGGMGFYHKAI 95
Query: 160 DLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMY 219
LF E R+ L +D+F++ VL+ACG + GK IH I VF+ + L+DMY
Sbjct: 96 GLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMY 155
Query: 220 CKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLG 279
CKC+ I +A +F + + VSW +++ GY + G EE +K+ M G+ + FTLG
Sbjct: 156 CKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLG 215
Query: 280 SVISSC-ANLASL-EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN 337
S + SC NL ++ G HG ++ GL I V AL+ Y K G + D+ +LF
Sbjct: 216 SALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSP 275
Query: 338 VRDEVSWTALVSGYAKFGK-----ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLV 392
++ V + A+++G+ + A E + LF +M G+KP + T ++ C+
Sbjct: 276 NQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAF 335
Query: 393 EKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
E G+ + K + I+ + +I++ S G E+ N P D + W T+++
Sbjct: 336 EYGKQIHAHICK-HNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTP-KLDIVSWTTMIA 393
Query: 453 SCRIHGNVE 461
+G E
Sbjct: 394 GYAQNGQFE 402
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 38/252 (15%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P D VSW +I+G+A +G A+ ++ +L G +TML + G
Sbjct: 381 PKLDIVSWTTMIAGYAQNGQFESALALFYELLASG-KKPDEFIITTMLSACADVAAERSG 439
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
Q+HG+ +K G G+ V + + MYAK G + AK F+E+ ++V ++ M
Sbjct: 440 EQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVM------- 492
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
I Q+G ++AI+LF M+ G+ +Q TF VL
Sbjct: 493 ------------------------ICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVL 528
Query: 182 TAC--GGLLALEEGKQIHAFIIRN-DHKDNVFVGSALVDMYCKCKSIKYAES-VFRTMAW 237
TAC GGL +EEG + + + ++ D K NV + +VD+ + + A++ + +
Sbjct: 529 TACSHGGL--VEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFG 586
Query: 238 KNVVSWTAMLVG 249
+ V W +L G
Sbjct: 587 DHPVMWRTLLSG 598
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Query: 273 PDDFTLGSVISSCANLASLEEGTQFHGR-----SLVTGLISFITVSNALVTFYGKCGNIE 327
P F L SV + S + G+ HG+ + T + + N + Y K G +
Sbjct: 2 PSVFPLDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMG 61
Query: 328 DSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS 387
++ +LF+ M+ R +S+ L+SGY G ++ I LF + LK D+ + GVLSAC
Sbjct: 62 NAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACG 121
Query: 388 R 388
+
Sbjct: 122 Q 122
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 246/652 (37%), Positives = 381/652 (58%), Gaps = 46/652 (7%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
+SW+++ HA HG+V +A++ + ML G+ ++ T+L SS V GR IH
Sbjct: 213 ISWSIMAGAHALHGNVWEALRHFRFMLLLGI-KATKSAMVTILSACSSPALVQDGRLIHS 271
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
I GF S + V + ++ MY R G VEE
Sbjct: 272 CIALSGFESELLVANAVMTMYG-------------------------------RCGAVEE 300
Query: 127 SRRLFRGMKD--KDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+R++F M + +D +SW M++ + N ++AI L++ M+L D+ T+ S+L+AC
Sbjct: 301 ARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQLRA---DKVTYVSLLSAC 357
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+ G+ +H I+ ++ + NV VG+ALV MY KC S A +VF M ++++SWT
Sbjct: 358 SSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWT 417
Query: 245 AMLVGYGQNGCSEEAVKIFCNM---QRNG----IEPDDFTLGSVISSCANLASLEEGTQF 297
++ Y + EA +F M ++NG ++PD +++++CA++++LE+G
Sbjct: 418 TIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMV 477
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGK 356
++ GL S V A+V YGKCG IE+ R+F+ + R +V W A+++ YA+FG+
Sbjct: 478 SEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQ 537
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY-GIRPIHDHY 415
++E + LF +M G++PD + + +L ACS GL ++G+ YF M EY + H+
Sbjct: 538 SHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHF 597
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
C+ D+L R GRL+EA+ F+ K+P PDA+ W +LL++CR H +++ K A LL L+P
Sbjct: 598 GCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEP 657
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSP 535
YV LS+IYA KW V+++R+ M E+GV+K+ G S I+ +H F+ D + P
Sbjct: 658 RCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHP 717
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
+ +I EL KL+ +M + GYVPD VLH V+ EK ++L HSE+LAIA GL+ P G
Sbjct: 718 RNREIREELAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLG 777
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
P+RV KNLRVCSDCH ATK ISKI R+I+VRD RFHLFK+G+CSC D+W
Sbjct: 778 TPLRVTKNLRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 829
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 210/414 (50%), Gaps = 40/414 (9%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGF-GSYVFVGSPLVDMYAKLGLIYDAKRGFDE 102
T++ +L + + + GR+IH +K + +G+ +V MYA DAK FD
Sbjct: 45 TYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDAKAAFDA 104
Query: 103 LPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLF 162
L ++N+ SWT ++ +G +E +
Sbjct: 105 LEQRNL-------------------------------YSWTGLVAAFAISGQSKETLRAL 133
Query: 163 REMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC 222
MR +G+ D TF + L +CG +L +G +IH ++ + + + V +AL++MY KC
Sbjct: 134 ERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKC 193
Query: 223 KSIKYAESVFRTMA-WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
S+ +A+ VF M +NV+SW+ M + +G EA++ F M GI+ + ++
Sbjct: 194 GSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTI 253
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN--VR 339
+S+C++ A +++G H ++G S + V+NA++T YG+CG +E++ ++F+ M+ +R
Sbjct: 254 LSACSSPALVQDGRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALR 313
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
D VSW ++S Y + + I L+++M L+ D+VT + +LSACS A V GR
Sbjct: 314 DVVSWNIMLSAYVHNDRGKDAIQLYQRM---QLRADKVTYVSLLSACSSAEDVGLGRVLH 370
Query: 400 EIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+ +V + + + ++ + ++ G EA++ +KM I W T++S+
Sbjct: 371 KQIVNDELEKNVIVG-NALVSMYAKCGSHTEARAVFDKME-QRSIISWTTIISA 422
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 210/454 (46%), Gaps = 44/454 (9%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
SW L++ A G + ++ M +DG+ +TF T L + G +IH
Sbjct: 112 SWTGLVAAFAISGQSKETLRALERMRQDGV-RPDAVTFITALGSCGDPESLRDGIRIHQM 170
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
++ V + L++MY K G + AKR F ++
Sbjct: 171 VVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME----------------------- 207
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
+ ++ ISW+ M +G EA+ FR M L G+ + ++L+AC
Sbjct: 208 -------RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSP 260
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM--AWKNVVSWTA 245
+++G+ IH+ I + + + V +A++ MY +C +++ A VF M A ++VVSW
Sbjct: 261 ALVQDGRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNI 320
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
ML Y N ++A++++ MQ + D T S++S+C++ + G H + +
Sbjct: 321 MLSAYVHNDRGKDAIQLYQRMQ---LRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDE 377
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
L + V NALV+ Y KCG+ ++ +F++M R +SWT ++S Y + E LF+
Sbjct: 378 LEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQ 437
Query: 366 KML-------SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
+ML S +KPD + + +L+AC+ +E+G+ E G+ T +
Sbjct: 438 QMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSE-QAASCGLSSDKAVGTAV 496
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+++ + G +EE + + + PD W +++
Sbjct: 497 VNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIA 530
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 178/357 (49%), Gaps = 42/357 (11%)
Query: 3 FHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGR 62
D VSWN+++S + + DA+++Y M ++T+ ++L SS V LGR
Sbjct: 312 LRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQLRA----DKVTYVSLLSACSSAEDVGLGR 367
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
+H I+ V VG+ LV MYAK G +A+ FD++ +++I+ + T+I+ +RR
Sbjct: 368 VLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRR 427
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
LV E+ LF+ M + L +NG + + D F ++L
Sbjct: 428 LVAEACHLFQQMLE------------LEKNGSSQR------------VKPDALAFVTILN 463
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK-NVV 241
AC + ALE+GK + + VG+A+V++Y KC I+ +F + + +V
Sbjct: 464 ACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQ 523
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
W AM+ Y Q G S EA+K+F M+ G+ PD F+ S++ +C++ G + G+S
Sbjct: 524 LWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSH-----TGLEDQGKS 578
Query: 302 LVTGLIS-FITVSNALVTF------YGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
T + + + V+ + F G+ G ++++ ++ V+ D V+WT+L++
Sbjct: 579 YFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAA 635
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 148/293 (50%), Gaps = 4/293 (1%)
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIR-NDHKDNVFVGSALVDMYCKC 222
++ + + + T+ +L C AL EG++IH+ ++ N N+ +G+ +V MY C
Sbjct: 33 DLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHC 92
Query: 223 KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
S A++ F + +N+ SWT ++ + +G S+E ++ M+++G+ PD T + +
Sbjct: 93 DSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITAL 152
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN-VRDE 341
SC + SL +G + H + + L VSNAL+ Y KCG++ + R+F +M R+
Sbjct: 153 GSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNV 212
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEI 401
+SW+ + +A G E + F ML G+K + ++ +LSACS LV+ GR
Sbjct: 213 ISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR-LIHS 271
Query: 402 MVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFP-PDAIGWATLLSS 453
+ G ++ + R G +EEA+ + M D + W +LS+
Sbjct: 272 CIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSA 324
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 4/198 (2%)
Query: 265 NMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS-FITVSNALVTFYGKC 323
++++ + ++ T ++ CA +L EG + H ++ L+ + + N +V+ Y C
Sbjct: 33 DLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHC 92
Query: 324 GNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVL 383
+ D+ F+ + R+ SWT LV+ +A G++ ET+ E+M G++PD VT I L
Sbjct: 93 DSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITAL 152
Query: 384 SACSRAGLVEKGRHYFEIMV-KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPP 442
+C + G +++V I P ++++ + G L AK KM
Sbjct: 153 GSCGDPESLRDGIRIHQMVVDSRLEIDP--KVSNALLNMYKKCGSLSHAKRVFAKMERTR 210
Query: 443 DAIGWATLLSSCRIHGNV 460
+ I W+ + + +HGNV
Sbjct: 211 NVISWSIMAGAHALHGNV 228
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 246/652 (37%), Positives = 382/652 (58%), Gaps = 46/652 (7%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
+SW+++ HA HG+V +A++ + ML G+ ++ T+L SS V GR IH
Sbjct: 126 ISWSIMAGAHALHGNVWEALRHFRFMLLLGI-KATKSAMVTILSACSSPALVQDGRMIHS 184
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
I GF S + V + ++ MY R G VEE
Sbjct: 185 CIALSGFESELLVANAVMTMYG-------------------------------RCGAVEE 213
Query: 127 SRRLFRGMKD--KDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+R++F M + +D +SW M++ + N ++AI L++ M+L D+ T+ S+L+AC
Sbjct: 214 ARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRMQLRP---DKVTYVSLLSAC 270
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+ G+ +H I+ ++ + NV VG+ALV MY KC S A +VF M ++++SWT
Sbjct: 271 SSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWT 330
Query: 245 AMLVGYGQNGCSEEAVKIFCNM---QRNG----IEPDDFTLGSVISSCANLASLEEGTQF 297
++ Y + EA +F M ++NG ++PD +++++CA++++LE+G
Sbjct: 331 TIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMV 390
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGK 356
++ GL S V A+V YGKCG IE++ R+F+ + R +V W A+++ YA+FG+
Sbjct: 391 SEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQ 450
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY-GIRPIHDHY 415
++E + LF +M G++PD + + +L ACS GL ++G+ YF M EY + H+
Sbjct: 451 SHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHF 510
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
C+ D+L R GRL+EA+ F+ K+P PDA+ W +LL++CR H +++ K A LL L+P
Sbjct: 511 GCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEP 570
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSP 535
YV LS+IYA KW V+++R+ M E+GV+K+ G S I+ +H F+ D + P
Sbjct: 571 RCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHP 630
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
+ +I EL KL+ +M + GYVPD VLH V+ EK ++L HSE+LAIA GL+ P G
Sbjct: 631 RNREIREELAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLG 690
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
P+RV KNLRVCSDCH ATK ISKI R+I+VRD RFHLFK+G+CSC D+W
Sbjct: 691 TPLRVTKNLRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 742
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 212/454 (46%), Gaps = 44/454 (9%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
SW L++ A G + ++ M +DG+ +TF T L + G +IH
Sbjct: 25 SWTGLVAAFAISGQSKETLRALERMRQDGV-RPDAVTFITALGSCGDPESLRDGIRIHQM 83
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
++ V + L++MY K G + AKR F ++
Sbjct: 84 VVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME----------------------- 120
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
+ ++ ISW+ M +G EA+ FR M L G+ + ++L+AC
Sbjct: 121 -------RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSP 173
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM--AWKNVVSWTA 245
+++G+ IH+ I + + + V +A++ MY +C +++ A VF M A ++VVSW
Sbjct: 174 ALVQDGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNI 233
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
ML Y N ++A++++ MQ + PD T S++S+C++ + G H + +
Sbjct: 234 MLSTYVHNDRGKDAIQLYQRMQ---LRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDE 290
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
L + V NALV+ Y KCG+ ++ +F++M R +SWT ++S Y + E LF+
Sbjct: 291 LEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQ 350
Query: 366 KML-------SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
+ML S +KPD + + +L+AC+ +E+G+ E G+ T +
Sbjct: 351 QMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSE-QAASCGLSSDKAVGTAV 409
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+++ + G +EEA+ + + PD W +++
Sbjct: 410 VNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIA 443
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 185/331 (55%), Gaps = 8/331 (2%)
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
+++ F ++ ++ SWT ++ +G +E + MR +G+ D TF + L +CG
Sbjct: 10 DAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCG 69
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA-WKNVVSWT 244
+L +G +IH ++ + + + V +AL++MY KC S+ +A+ VF M +NV+SW+
Sbjct: 70 DPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWS 129
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
M + +G EA++ F M GI+ + +++S+C++ A +++G H ++
Sbjct: 130 IMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALS 189
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMN--VRDEVSWTALVSGYAKFGKANETID 362
G S + V+NA++T YG+CG +E++ ++F+ M+ +RD VSW ++S Y + + I
Sbjct: 190 GFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQ 249
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL 422
L+++M L+PD+VT + +LSACS A V GR + +V + + + ++ +
Sbjct: 250 LYQRM---QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVG-NALVSMY 305
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
++ G EA++ +KM I W T++S+
Sbjct: 306 AKCGSHTEARAVFDKME-QRSIISWTTIISA 335
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 179/357 (50%), Gaps = 42/357 (11%)
Query: 3 FHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGR 62
D VSWN+++S + + DA+++Y M ++T+ ++L SS V LGR
Sbjct: 225 LRDVVSWNIMLSTYVHNDRGKDAIQLYQRMQL----RPDKVTYVSLLSACSSAEDVGLGR 280
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
+H I+ V VG+ LV MYAK G +A+ FD++ +++I+ + T+I+ +RR
Sbjct: 281 VLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRR 340
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
LV E+ LF+ M + L +NG + + D F ++L
Sbjct: 341 LVAEACHLFQQMLE------------LEKNGSSQR------------VKPDALAFVTILN 376
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK-NVV 241
AC + ALE+GK + + VG+A+V++Y KC I+ A +F + + +V
Sbjct: 377 ACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQ 436
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
W AM+ Y Q G S EA+K+F M+ G+ PD F+ S++ +C++ G + G+S
Sbjct: 437 LWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSH-----TGLEDQGKS 491
Query: 302 LVTGLIS-FITVSNALVTF------YGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
T + + + V+ + F G+ G ++++ ++ V+ D V+WT+L++
Sbjct: 492 YFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAA 548
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 131/280 (46%), Gaps = 33/280 (11%)
Query: 218 MYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFT 277
MY C S A++ F + +N+ SWT ++ + +G S+E ++ M+++G+ PD T
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 278 LGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN 337
+ + SC + SL +G + H + + L VSNAL+ Y KCG++ + R+F +M
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120
Query: 338 -VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR 396
R+ +SW+ + +A G E + F ML G+K + ++ +LSACS LV+ GR
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 180
Query: 397 HYF----------EIMVKE-----YG-------IRPIHD----------HYTCMIDILSR 424
E++V YG R + D + M+
Sbjct: 181 MIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVH 240
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
R ++A +M PD + + +LLS+C +V +G+
Sbjct: 241 NDRGKDAIQLYQRMQLRPDKVTYVSLLSACSSAEDVGLGR 280
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 252/649 (38%), Positives = 373/649 (57%), Gaps = 35/649 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P V+WN +I+ + +G +A+ +Y M+ DG+ TFS++ S V
Sbjct: 136 VPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILP-DEFTFSSVFKAFSDLGLVHE 194
Query: 61 GRQIHGHILKFGFG-SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G++ HG + G G S VFVGS LVDMYAK G + DA+ D++ K++V++
Sbjct: 195 GQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLF-------- 246
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
T +I G +G + E++ +FR M +G+ +++T S
Sbjct: 247 -----------------------TALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSS 283
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL CG L L G+ IH I++ + V ++L+ MY +C + + VF+ N
Sbjct: 284 VLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPN 343
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
V+WT+++VG QNG E A+ F M R+ I P+ FTL SV+ +C++LA LE+G Q H
Sbjct: 344 QVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHA 403
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ GL V AL+ FYGKCG+ E + +FN + D VS +++ YA+ G +E
Sbjct: 404 IVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHE 463
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ LF M GL+P+ VT +GVLSAC+ AGL+E+G H F I DHY CM+
Sbjct: 464 ALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMV 523
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L RAGRL+EA+ IN++ D + W TLLS+CRIHG+VE+ K +++L P +
Sbjct: 524 DLLGRAGRLKEAEMLINQVNI-SDVVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGG 582
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
++VLLS++YAS G W V +++ MRE ++K+P SW+ + +H F A DWS P
Sbjct: 583 THVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRD 642
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIP-PGLPI 598
I +LE+L K+ + GYVPD VL D++ +KI+ L +HSEKLA+AF L I
Sbjct: 643 IREKLEELIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTI 702
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R++KNLRVC DCH K++SKI R+I+ RD RFH F+NG CSCGD+W
Sbjct: 703 RILKNLRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDYW 751
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 130/401 (32%), Positives = 211/401 (52%), Gaps = 44/401 (10%)
Query: 46 STMLIMSSSRRCVDLGR-----QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF 100
ST L S ++C+ + +I H LK GF + +G+ L+D Y K G + A++ F
Sbjct: 76 STKLYSSLIQQCIGIKSITDITKIQSHALKRGF--HHSLGNKLIDAYLKCGSVVYARKVF 133
Query: 101 DELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAID 160
DE+P ++IV +N+MI +R NG +EAID
Sbjct: 134 DEVPHRHIVAWNSMIASYIR-------------------------------NGRSKEAID 162
Query: 161 LFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHA-FIIRNDHKDNVFVGSALVDMY 219
+++ M +G+ D+FTF SV A L + EG++ H ++ NVFVGSALVDMY
Sbjct: 163 IYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMY 222
Query: 220 CKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLG 279
K ++ A V + K+VV +TA++VGY +G E++++F NM + GIE +++TL
Sbjct: 223 AKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLS 282
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
SV+ C NL L G HG + GL S + +L+T Y +CG ++DS ++F +
Sbjct: 283 SVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINP 342
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
++V+WT+++ G + G+ + F +ML + P+ TL VL ACS ++E+G+
Sbjct: 343 NQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIH 402
Query: 400 EIMVKEYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKM 438
I++K +G+ D Y +ID + G E A+S N +
Sbjct: 403 AIVMK-FGLDI--DKYVGAALIDFYGKCGSTEIARSVFNGL 440
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 263/658 (39%), Positives = 369/658 (56%), Gaps = 81/658 (12%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDE------------------ 102
G H H+LK G GS FV + ++DMYA+LG I A++ FDE
Sbjct: 114 GIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGY 173
Query: 103 ---------------LPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMIT 147
+PE+N++ + M+TG + +E +RR F M ++ +SW M++
Sbjct: 174 WKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLS 233
Query: 148 GLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKD 207
G QNGL E + LF EM G+ D+ T+ +V++AC + A ++R H+
Sbjct: 234 GYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSS----RGDPCLAASLVRTLHQK 289
Query: 208 ----NVFVGSALVDMYCKCKSIKYAESVF------------------------------- 232
N FV +AL+DMY KC SI A +F
Sbjct: 290 QIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSAREL 349
Query: 233 -RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLAS 290
TM +NVV+W +M+ GY QNG S A+++F M + PD+ T+ SVIS+C +L +
Sbjct: 350 FNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGA 409
Query: 291 LEEGTQFHGRSLVTGLISF-ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
LE G + R L I I+ NA++ Y +CG++ED+ R+F EM RD VS+ L+S
Sbjct: 410 LELG-NWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLIS 468
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
G+A G E I+L M G++PD VT IGVL+ACS AGL+E+GR FE +K+
Sbjct: 469 GFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFE-SIKD---- 523
Query: 410 PIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAES 469
P DHY CM+D+L R G LE+AK + +MP P A + +LL++ RIH VE+G+ AA
Sbjct: 524 PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANK 583
Query: 470 LLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSA 529
L EL+P N +++LLS+IYAS G+W V ++R M++ GV+K G SW++Y ++H F
Sbjct: 584 LFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIV 643
Query: 530 DDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGL 589
D S SD IY L +L +KM + GY+ D S VL DVE EK +++ HSEKLAI + L
Sbjct: 644 ADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYAL 703
Query: 590 LFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
L G IRVVKNLRVC DCH A K ISK+ R I+VRD RFH F +G CSC D+W
Sbjct: 704 LVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 761
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/342 (33%), Positives = 186/342 (54%), Gaps = 15/342 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSR----R 56
MP VSWN ++SG+A +G + +++++ M+ G+ T+ T++ SSR
Sbjct: 220 MPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGI-EPDETTWVTVISACSSRGDPCL 278
Query: 57 CVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL-PEKNIVMYNTMI 115
L R +H ++ FV + L+DMYAK G I A+R FDEL +N V +N MI
Sbjct: 279 AASLVRTLHQKQIQLN----CFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMI 334
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAMDQ 174
+ R G ++ +R LF M ++ ++W +MI G QNG AI+LF+EM + L D+
Sbjct: 335 SAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDE 394
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
T SV++ACG L ALE G + F+ N K ++ +A++ MY +C S++ A+ VF+
Sbjct: 395 VTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQE 454
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
MA ++VVS+ ++ G+ +G EA+ + M+ GIEPD T V+++C++ LEEG
Sbjct: 455 MATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEG 514
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
+ S+ I +V G+ G +ED+ R M
Sbjct: 515 RKVF-ESIKDPAIDHYA---CMVDLLGRVGELEDAKRTMERM 552
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 180/427 (42%), Gaps = 104/427 (24%)
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
LF + + +T+M+ + + +F M+ G+ D F + ++ + G
Sbjct: 56 LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAG---- 111
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF-------RTMA------ 236
G HA +++ H + FV +A++DMY + I +A VF R +A
Sbjct: 112 -NGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMV 170
Query: 237 ---WK-----------------NVVSWT-------------------------------A 245
WK NV++WT A
Sbjct: 171 SGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNA 230
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC---------ANLASLEEGTQ 296
ML GY QNG +EE +++F M GIEPD+ T +VIS+C A+L Q
Sbjct: 231 MLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQ 290
Query: 297 FHGRSLV-TGLISFIT----------------------VSNALVTFYGKCGNIEDSHRLF 333
V T L+ NA+++ Y + GN++ + LF
Sbjct: 291 IQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELF 350
Query: 334 NEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS-HGLKPDEVTLIGVLSACSRAGLV 392
N M R+ V+W ++++GYA+ G++ I+LF++M++ L PDEVT++ V+SAC G +
Sbjct: 351 NTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGAL 410
Query: 393 EKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
E G + + I H MI + SR G +E+AK +M D + + TL+S
Sbjct: 411 ELGNWVVRFLTENQIKLSISGH-NAMIFMYSRCGSMEDAKRVFQEMA-TRDVVSYNTLIS 468
Query: 453 SCRIHGN 459
HG+
Sbjct: 469 GFAAHGH 475
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 160/392 (40%), Gaps = 97/392 (24%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRND-HKDNVFVGSALVDMYCKCKSIK-YAESVFRT 234
GS+ + G L +Q+HA II N H N +V + L++ + ++ Y +F +
Sbjct: 4 LGSIASRVGNFSHL---RQLHAQIIHNSLHHHNYWV-ALLINHCTRLRAPPHYTHLLFNS 59
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
NV +T+ML Y + V +F +MQ G+ PD F +I S N G
Sbjct: 60 TLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGN-----GG 114
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNE------------------- 335
FH L G S V NA++ Y + G I + ++F+E
Sbjct: 115 IGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYW 174
Query: 336 --------------MNVRDEVSWTALVSGYAKF--------------------------- 354
M R+ ++WTA+V+GYAK
Sbjct: 175 KWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSG 234
Query: 355 ----GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP 410
G A E + LF++M++ G++PDE T + V+SACS G + + +R
Sbjct: 235 YAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRG---------DPCLAASLVRT 285
Query: 411 IHDHY--------TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
+H T ++D+ ++ G + A+ +++ +++ W ++S+ GN++
Sbjct: 286 LHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLD- 344
Query: 463 GKWAAESLLELDP-YNPASYVLLSSIYASKGK 493
+A L P N ++ + + YA G+
Sbjct: 345 ---SARELFNTMPGRNVVTWNSMIAGYAQNGQ 373
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/597 (40%), Positives = 355/597 (59%), Gaps = 71/597 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SWN ++SG A H ++++ + M ++ L+ +F + L + +++
Sbjct: 107 MPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDF-LLNEYSFGSALSACAGLMDLNM 165
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+H + K + + V++GS L+DMY+K G + A+
Sbjct: 166 GTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEE---------------------- 203
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+F GM +++ ++W ++IT QNG EA+++F M GL D+ T SV
Sbjct: 204 ---------VFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASV 254
Query: 181 LTACGGLLALEEGKQIHAFIIR-NDHKDNVFVGSALVDMYCKCK---------------- 223
++AC L AL+EG QIHA +++ N +D++ +G+ALVDMY KC
Sbjct: 255 VSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRN 314
Query: 224 ---------------SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR 268
S+K A +F M +NVVSW A++ GY QNG +EEA+++F ++R
Sbjct: 315 VVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKR 374
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFH------GRSLVTGLISFITVSNALVTFYGK 322
I P +T G+++S+CANLA L G Q H G +G S I V N+L+ Y K
Sbjct: 375 ESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMK 434
Query: 323 CGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGV 382
CG+IED R+F +M RD VSW A++ GYA+ G E + +F KML G KPD VT+IGV
Sbjct: 435 CGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGV 494
Query: 383 LSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPP 442
L ACS AGLVE+GRHYF M +E+G+ P+ DHYTCM+D+L RAG L EAK+ I MP P
Sbjct: 495 LCACSHAGLVEEGRHYFFSM-EEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNP 553
Query: 443 DAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRR 502
DA+ W +LL++C++HGN+E+GK AAE LLE+DP+N YVLLS++YA G+W V ++R+
Sbjct: 554 DAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRK 613
Query: 503 TMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPD 559
MR++GV K PGCSWI+ +SRVH+F D S P+ QIY+ L+ L +M + GY+PD
Sbjct: 614 LMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPD 670
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 135/427 (31%), Positives = 232/427 (54%), Gaps = 38/427 (8%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
R +H IL F +F+ + L+D+Y K + DA++ FD +P++N +N++I+ L +
Sbjct: 35 RLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKS 94
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G ++E+ RLF M + D SW +M++G Q+ E+++ F +M E +++++FGS L
Sbjct: 95 GFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSAL 154
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+AC GL+ L G Q+HA + ++ + +V++GSAL+DMY KC S+ AE VF M +N+V
Sbjct: 155 SACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLV 214
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
+W +++ Y QNG + EA+++F M +G+EPD+ TL SV+S+CA+L +L+EG Q H R
Sbjct: 215 TWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARV 274
Query: 302 LVTG-LISFITVSNALVTFYGKCGNIEDSHRLFNEMNV---------------------- 338
+ T + + NALV Y KC + ++ R+F+ M++
Sbjct: 275 VKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAA 334
Query: 339 ---------RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
R+ VSW AL++GY + G+ E + LF + + P T +LSAC+
Sbjct: 335 RFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANL 394
Query: 390 GLVEKGRHYFEIMVK---EYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDA 444
+ GR ++K E+ D + +ID+ + G +E+ KM D
Sbjct: 395 ADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMK-ERDC 453
Query: 445 IGWATLL 451
+ W ++
Sbjct: 454 VSWNAII 460
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 171/364 (46%), Gaps = 35/364 (9%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
F +L +C + + +HA I+ +F+ + L+D+Y KC + A +F M
Sbjct: 18 FAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMP 77
Query: 237 WKNV-------------------------------VSWTAMLVGYGQNGCSEEAVKIFCN 265
+N SW +M+ G+ Q+ EE+++ F
Sbjct: 78 QRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVK 137
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M R ++++ GS +S+CA L L GTQ H + + + + +AL+ Y KCG+
Sbjct: 138 MHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGS 197
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+ + +F+ M R+ V+W +L++ Y + G A+E +++F +M+ GL+PDEVTL V+SA
Sbjct: 198 VACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSA 257
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
C+ +++G +VK R ++D+ ++ ++ EA+ ++M + +
Sbjct: 258 CASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSI-RNVV 316
Query: 446 GWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
+++S +V+ ++ + + N S+ L + Y G+ + +L R ++
Sbjct: 317 SETSMVSGYARAASVKAARFMFSKMTQ---RNVVSWNALIAGYTQNGENEEALRLFRLLK 373
Query: 506 EKGV 509
+ +
Sbjct: 374 RESI 377
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 100/247 (40%), Gaps = 41/247 (16%)
Query: 273 PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRL 332
P+ ++ SC S H R L+T I + N L+ YGKC ++D+ +L
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 333 FNEMNVR-------------------------------DEVSWTALVSGYAKFGKANETI 361
F+ M R D+ SW ++VSG+A+ + E++
Sbjct: 73 FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--TCMI 419
+ F KM +E + LSAC+ + G ++ K R D Y + +I
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKS---RYSTDVYMGSALI 189
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG----NVEIGKWAAESLLELDP 475
D+ S+ G + A+ + M + + W +L++ +G +E+ +S LE D
Sbjct: 190 DMYSKCGSVACAEEVFSGM-IERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDE 248
Query: 476 YNPASYV 482
AS V
Sbjct: 249 VTLASVV 255
>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
Length = 785
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/652 (36%), Positives = 384/652 (58%), Gaps = 49/652 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRR--CVDLGR 62
D VSWN L+SG+ G+ + V+V+ +M + G+G L+ +++ S R +D+
Sbjct: 174 DDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMG-LNSFALGSVIKCCSGRGDGTMDIAE 232
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
+HG ++K G S VF+ S ++DMYAK +G
Sbjct: 233 AVHGCVIKAGLDSDVFLVSAMIDMYAK-------------------------------KG 261
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNG------LEREAIDLFREMRLEGLAMDQFT 176
+ E+ LFR +++ + + + TMI G + + EA+ L+ E++ G+ +FT
Sbjct: 262 ALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFT 321
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
F SVL AC LE GKQIH +I+ +++ F+GSAL+D+Y ++ FR+
Sbjct: 322 FSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSP 381
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
++V+WTAM+ G QN E+A+ +F G++PD FT+ SV+++CA+LA G Q
Sbjct: 382 KHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQ 441
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
+ +G F + N+ V Y + G+++ + R F EM D VSW+A++S +A+ G
Sbjct: 442 IQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGC 501
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
A + + F++M+ + P+E+T +GVL+ACS GLV++G Y+E M K+YG+ P H T
Sbjct: 502 ARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCT 561
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY 476
C++D+L RAGRL +A++FI+ F D + W +LL+SCRIH ++E G+ A ++EL+P
Sbjct: 562 CVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPT 621
Query: 477 NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPY 536
+ ASYV+L ++Y G+ S+ R M+++GV+K+PG SWI+ K VH F A D S P
Sbjct: 622 SSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPE 681
Query: 537 SDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIK-MLNHHSEKLAIAFGLLFIPPG 595
S IY +LE++ ++ K D E+S++ + ++N HSEKLA+A G++ +P
Sbjct: 682 SSAIYTKLEEMLSRIEKLATT--------DTEISKREQNLMNCHSEKLAVALGMIHLPQS 733
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
PIRV+KNLRVC DCH+ K ISK REI++RD +RFH F++G CSC D+W
Sbjct: 734 APIRVMKNLRVCRDCHSTMKLISKSENREIILRDPIRFHHFRDGSCSCADYW 785
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 181/359 (50%), Gaps = 10/359 (2%)
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
P ++ + NT++ R G +RRL M ++++S+ +I + GL +++
Sbjct: 39 PAASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLA 98
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
R G+ +D+F++ + L AC L G+ +HA I + VFV ++LV MY KC
Sbjct: 99 RARRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCG 158
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
+ A VF ++ VSW +++ GY + G EE V++F M+R G+ + F LGSVI
Sbjct: 159 EMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIK 218
Query: 284 SCANL--ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE 341
C+ +++ HG + GL S + + +A++ Y K G + ++ LF + +
Sbjct: 219 CCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNV 278
Query: 342 VSWTALVSGYAK----FGK--ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG 395
V + +++G+ + GK A+E + L+ ++ S G++P E T VL AC+ AG +E G
Sbjct: 279 VMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFG 338
Query: 396 RHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
+ ++K Y + + +ID+ +G +E+ P D + W ++S C
Sbjct: 339 KQIHGQVIK-YTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSP-KHDIVTWTAMVSGC 395
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 134/273 (49%), Gaps = 15/273 (5%)
Query: 208 NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQ 267
++F+ + L+ YC+ A + M +N VS+ ++ Y + G + +++ +
Sbjct: 42 SLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARAR 101
Query: 268 RNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIE 327
R G++ D F+ + +++C+ L G H +++ GL S + VSN+LV+ Y KCG +
Sbjct: 102 RAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMG 161
Query: 328 DSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS 387
++ R+F+ RD+VSW +LVSGY + G E + +F M G+ + L V+ CS
Sbjct: 162 EARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCS 221
Query: 388 RAGLVEKGRHYFEIMVKEYG--IRPIHDH----YTCMIDILSRAGRLEEAKSFINKMPFP 441
+G +I +G I+ D + MID+ ++ G L EA + +
Sbjct: 222 -----GRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQ-E 275
Query: 442 PDAIGWATLLSS-CRIHGNVEIGKWAAESLLEL 473
P+ + + T+++ CR IGK A L L
Sbjct: 276 PNVVMFNTMIAGFCRT--ETVIGKEVASEALTL 306
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 81/189 (42%), Gaps = 34/189 (17%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P HD V+W ++SG + A+ +++ L GL T S+++ +S G
Sbjct: 381 PKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGL-KPDLFTISSVMNACASLAVARAG 439
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
QI K GF + +G+ V MYA+ G + A R F E
Sbjct: 440 EQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQE------------------- 480
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
M+ D +SW+ +I+ Q+G R+A+ F EM + ++ TF VL
Sbjct: 481 ------------MESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVL 528
Query: 182 TAC--GGLL 188
TAC GGL+
Sbjct: 529 TACSHGGLV 537
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M HD VSW+ +IS HA HG DA+ ++ M+ D + ITF +L S VD
Sbjct: 481 MESHDVVSWSAVISCHAQHGCARDALHFFDEMV-DAKVVPNEITFLGVLTACSHGGLVDE 539
Query: 61 GRQIHGHILK-FGFGSYVFVGSPLVDMYAKLGLIYDAK 97
G + + + K +G + + +VD+ + G + DA+
Sbjct: 540 GLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAE 577
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/615 (39%), Positives = 357/615 (58%), Gaps = 37/615 (6%)
Query: 39 NLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKR 98
N ++ TF ++ + + + G +H ++ GF F+ + L++MY +LG I A++
Sbjct: 75 NPTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARK 134
Query: 99 GFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREA 158
FDE E+ I + W + L G +E
Sbjct: 135 VFDETRERTIYV-------------------------------WNALFRALAMVGCGKEL 163
Query: 159 IDLFREMRLEGLAMDQFTFGSVLTACG----GLLALEEGKQIHAFIIRNDHKDNVFVGSA 214
+DL+ +M G+ D+FT+ VL AC + L++GK+IHA I+R+ ++ N+ V +
Sbjct: 164 LDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTT 223
Query: 215 LVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE-- 272
L+D+Y K S+ YA SVF M KN VSW+AM+ + +N +A+++F M +
Sbjct: 224 LLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSV 283
Query: 273 PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRL 332
P+ T+ +V+ +CA LA+LE+G HG L GL S + V NAL+T YG+CG I R+
Sbjct: 284 PNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRV 343
Query: 333 FNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLV 392
F+ M RD VSW +L+S Y G + I +FE M+ G P ++ I VL ACS AGLV
Sbjct: 344 FDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLV 403
Query: 393 EKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
E+G+ FE M+ +Y I P +HY CM+D+L RA RL+EA I M F P W +LL
Sbjct: 404 EEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFEPGPTVWGSLLG 463
Query: 453 SCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKD 512
SCRIH NVE+ + A+ L EL+P N +YVLL+ IYA W + + + +G++K
Sbjct: 464 SCRIHCNVELAERASTLLFELEPRNAGNYVLLADIYAEAKMWSEAKSVMKLLEARGLQKL 523
Query: 513 PGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEK 572
PGCSWI+ K +V+ F + D +P ++I+A L KL+ +M +GYVP + VL+D++ EK
Sbjct: 524 PGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEEK 583
Query: 573 IKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVR 632
+++ HSEKLA+AFGL+ G IR+ KNLR+C DCH TK+ISK REILVRD R
Sbjct: 584 ERIVLGHSEKLAVAFGLINTVKGETIRIRKNLRLCEDCHAVTKFISKFANREILVRDVNR 643
Query: 633 FHLFKNGECSCGDFW 647
FH FK+G CSCGD+W
Sbjct: 644 FHHFKDGVCSCGDYW 658
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 89/170 (52%), Gaps = 5/170 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNL-SRITFSTMLIMSSSRRCVD 59
MP + VSW+ +I+ A + A++++ LM+ + ++ + +T +L + ++
Sbjct: 244 MPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALE 303
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G+ IHG+IL+ G S + V + L+ MY + G I +R FD + +++V +N++I+
Sbjct: 304 QGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYG 363
Query: 120 RRGLVEESRRLFRGMKDKDS----ISWTTMITGLMQNGLEREAIDLFREM 165
G +++ ++F M + S IS+ T++ GL E LF M
Sbjct: 364 MHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESM 413
>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 250/650 (38%), Positives = 371/650 (57%), Gaps = 47/650 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN +ISG G ++ AVK++ D + S ++++ M
Sbjct: 92 MPLRDVVSWNSMISGCVECGDIDTAVKMF-----DEMPERSVVSWTAM------------ 134
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
V+ + G++ A+R F ++P K+I +N M+ G L+
Sbjct: 135 -----------------------VNGCFRFGMVDQAERLFCQMPVKDIAAWNAMVHGYLQ 171
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G V+++ +LF+ M K+ ISWTTMI GL QN EA++LF+ M + TF V
Sbjct: 172 FGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFTCV 231
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+TAC A G Q+H FII++ +V ++L+ +Y CK + + VF M + V
Sbjct: 232 ITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHEKV 291
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
WTA+L GY N E+A+ +F M RN I P+ T S ++SC+ L +L+ G + HG
Sbjct: 292 AVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGKEIHGV 351
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ GL + V N+LV Y GN+ D+ +F E+ + VSW +++ G A+ G+
Sbjct: 352 AVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIVGCAQHGRGKWA 411
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH---DHYTC 417
+F +M+ +PDE+T G+LSACS G ++KGR F + G+ I HYTC
Sbjct: 412 FVIFGQMIRLNKEPDEITFTGLLSACSHCGFLQKGRKLFYYI--SSGLNHIDRKIQHYTC 469
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
M+DIL R G L+EA+ I M P+ + W LLS+CR+H +V+ G+ AA ++ LD +
Sbjct: 470 MVDILGRCGELKEAEKLIESMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKS 529
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
A+YVLLS+IYAS G+W VS+LR M++KG+ K PG SW+ + + H F + D P+
Sbjct: 530 SAAYVLLSNIYASAGRWSSVSKLRVKMKQKGIMKKPGSSWVVIRGKKHEFFSGD--RPHC 587
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
+I+ +LE L K+ + GYVPD S LHDVE +K +ML +HSE+LAIAFGL+ G
Sbjct: 588 LRIFEKLEFLREKLKELGYVPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGST 647
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ V+KNLRVC DCH K IS++ +I++RD RFH FKNG CSCGD+W
Sbjct: 648 VTVMKNLRVCEDCHTVIKLISRVVGCKIVLRDPTRFHHFKNGMCSCGDYW 697
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 192/372 (51%), Gaps = 13/372 (3%)
Query: 95 DAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGL 154
+A+ FD++P ++ +Y MI+G R + ++ LF M +D +SW +MI+G ++ G
Sbjct: 53 EAREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEMPLRDVVSWNSMISGCVECGD 112
Query: 155 EREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSA 214
A+ +F EM + ++ +++ C +++ +++ + D + +A
Sbjct: 113 IDTAVKMFDEMPERSVV----SWTAMVNGCFRFGMVDQAERLFCQMPVKD----IAAWNA 164
Query: 215 LVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD 274
+V Y + + A +F+ M KNV+SWT M+ G QN S EA+ +F NM R I+
Sbjct: 165 MVHGYLQFGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKST 224
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN 334
T VI++CAN + GTQ HG + +G + V+ +L+T Y C EDS ++F
Sbjct: 225 SRTFTCVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFG 284
Query: 335 EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEK 394
EM WTAL+SGY+ K + +++F +M+ + + P++ T L++CS G ++
Sbjct: 285 EMVHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDW 344
Query: 395 GRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
G+ + VK G+ + ++ + S +G + +A S ++ F + W +++ C
Sbjct: 345 GKEIHGVAVK-LGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEI-FKKSIVSWNSIIVGC 402
Query: 455 RIHGNVEIGKWA 466
HG GKWA
Sbjct: 403 AQHGR---GKWA 411
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/139 (20%), Positives = 66/139 (47%), Gaps = 15/139 (10%)
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
++++ +F+++ +T ++SGY + + + ++LF++M D V+ ++S
Sbjct: 51 LDEAREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEMPLR----DVVSWNSMISG 106
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
C G ++ F+ M + + +T M++ R G +++A+ +MP D
Sbjct: 107 CVECGDIDTAVKMFDEMPERSVVS-----WTAMVNGCFRFGMVDQAERLFCQMPV-KDIA 160
Query: 446 GWATLLSSCRIHGNVEIGK 464
W + +HG ++ GK
Sbjct: 161 AWNAM-----VHGYLQFGK 174
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 229/648 (35%), Positives = 395/648 (60%), Gaps = 34/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLML-KDGLGNLSRITFSTMLIMSSSRRCVD 59
MP + VSW+ L++G+ +G+ + +++ M+ KD + + +T + S+ V+
Sbjct: 83 MPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFP-NEYVIATAISSCDSQMYVE 141
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G+Q HG+ LK G + +V + L+ +Y+K + A + +P +I YN ++ GLL
Sbjct: 142 -GKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLL 200
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
Q+ EA+D+ + + EG+ + T+ +
Sbjct: 201 -------------------------------QHTHMAEAVDVLKLIISEGIEWNNATYVT 229
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+ C L + GKQ+HA ++++D +V++GS+++DMY KC ++ + F + +N
Sbjct: 230 IFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRN 289
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VVSWT+++ Y QN EEA+ +F M+ + I P+++T+ + +S A L++L G Q H
Sbjct: 290 VVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHA 349
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
R+ +GL + V NAL+ Y K G+I + +F+ M + ++W A+++G++ G E
Sbjct: 350 RAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKE 409
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ +F+ M++ G +P+ VT IGV+ AC+ LV++G +YF ++K++ I P +HYTC++
Sbjct: 410 ALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIV 469
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
+LSR+GRL+EA++F+ D + W TLL++C +H + + G+ AE LL+L+P +
Sbjct: 470 GLLSRSGRLDEAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQLEPRDVG 529
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+Y+LLS+++A +WDHV ++R+ MRE+ V+K+PG SW++ ++ H+F+++D P ++
Sbjct: 530 TYILLSNMHARVRRWDHVVEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANL 589
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY ++ L K+ GYVPD+ +VLHD+E +K+ L++HSEKLA+A+GL+ P G PI
Sbjct: 590 IYENVKDLLSKIRPLGYVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPIT 649
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V+KNLR+C DCH A K ISK+ R I+VRDA RFH F+NG CSCGD+W
Sbjct: 650 VIKNLRMCDDCHTAIKLISKVANRVIVVRDANRFHHFQNGCCSCGDYW 697
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 152/281 (54%), Gaps = 4/281 (1%)
Query: 112 NTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL-EGL 170
N++I ++ V +R+LF M ++ +SW+ ++ G MQNG E +LF++M + + +
Sbjct: 61 NSLINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNI 120
Query: 171 AMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAES 230
+++ + +++C + +E GKQ H + +++ + + +V +AL+ +Y KC + A
Sbjct: 121 FPNEYVIATAISSCDSQMYVE-GKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQ 179
Query: 231 VFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS 290
+ T+ ++ + ++ G Q+ EAV + + GIE ++ T ++ CA+L
Sbjct: 180 ILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKD 239
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
+ G Q H + L + + + + ++++ YGKCGN+ F+ + R+ VSWT++++
Sbjct: 240 ITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAA 299
Query: 351 YAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGL 391
Y + E ++LF KM + P+E T+ + + S AGL
Sbjct: 300 YFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFN--SAAGL 338
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 139/270 (51%), Gaps = 11/270 (4%)
Query: 190 LEEGKQIHAFIIRNDHK---DNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L+ G+ IHA + +H V ++L+++Y KC + A +F +M +NVVSW+A+
Sbjct: 35 LKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMPRRNVVSWSAL 94
Query: 247 LVGYGQNGCSEEAVKIFCNMQ-RNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
+ GY QNG E ++F M ++ I P+++ + + ISSC + +E G Q HG +L +G
Sbjct: 95 MAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYVE-GKQCHGYALKSG 153
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
L V NAL+ Y KC ++ + ++ + D + +V+G + E +D+ +
Sbjct: 154 LEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLK 213
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--TCMIDILS 423
++S G++ + T + + C+ + G+ M+K D Y + +ID+
Sbjct: 214 LIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKS---DIDCDVYIGSSIIDMYG 270
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+ G + ++F +++ + + W +++++
Sbjct: 271 KCGNVLSGRTFFDRLQ-SRNVVSWTSIIAA 299
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 249/669 (37%), Positives = 379/669 (56%), Gaps = 57/669 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+WN +IS G +AV+V M+ G+ +TF++ L S + +GR++
Sbjct: 224 DLVTWNTMISLLVQGGRCEEAVQVLYDMVALGV-RPDGVTFASALPACSRLELLGVGREV 282
Query: 65 HGHILKFG-FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPE--KNIVMYNTMITGLLRR 121
H +LK + FV S LVDMYA + A+R FD +PE + + M+N MI G +
Sbjct: 283 HAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQH 342
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQFTFGSV 180
G G++ EAI+LF M E G A + T V
Sbjct: 343 G------------------------------GMDEEAIELFSRMEAEAGCAPSETTMAGV 372
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC + +H ++++ D N FV +AL+DMY + + A ++F + +++
Sbjct: 373 LPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDI 432
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQ--------RNGIE------------PDDFTLGS 280
VSW ++ G G EA ++ MQ +E P++ TL +
Sbjct: 433 VSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMT 492
Query: 281 VISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD 340
++ CA LA+ G + HG ++ L S + V +ALV Y KCG + + +F+ + R+
Sbjct: 493 LLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRN 552
Query: 341 EVSWTALVSGYAKFGKANETIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYF 399
++W L+ Y G +E + LF++M+++G P+EVT I L+ACS +GLV++G F
Sbjct: 553 VITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELF 612
Query: 400 EIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM-PFPPDAIGWATLLSSCRIHG 458
+ M ++YG P + C++D+L RAGRL+EA I+ M P W+T+L +CR+H
Sbjct: 613 QGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHR 672
Query: 459 NVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWI 518
NV++G+ AAE L EL+P + YVLL +IY++ G W++ +++R MR++GV K+PGCSWI
Sbjct: 673 NVKLGRIAAERLFELEPDEASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCSWI 732
Query: 519 KYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNH 578
+ +H F A + + P S Q++A ++ L +M +EGYVPD S VLHDV+ +EK ML +
Sbjct: 733 ELDGAIHRFMAGESAHPESAQVHAHMDALWERMRREGYVPDTSCVLHDVDEAEKAAMLRY 792
Query: 579 HSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKN 638
HSEKLAIAFGLL PPG IRV KNLRVC+DCH A K+IS++ REI++RD RFH F++
Sbjct: 793 HSEKLAIAFGLLRAPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFRD 852
Query: 639 GECSCGDFW 647
G CSCGD+W
Sbjct: 853 GTCSCGDYW 861
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 132/488 (27%), Positives = 220/488 (45%), Gaps = 67/488 (13%)
Query: 3 FHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSS--SRRCVDL 60
D VS+N LIS A+ ML D +S T ++L+ S + + L
Sbjct: 115 LRDAVSYNSLISALCLFRRWGHALDALRDMLADH--EVSSFTLVSVLLACSHLADQGHRL 172
Query: 61 GRQIHGHILKFGF---GSYVFVGSPLVDMYAKLGLIYDAKRGF--DELPEKNIVMYNTMI 115
GR+ H LK GF G F + L+ MYA+LGL+ DA+R F ++V +NTMI
Sbjct: 173 GREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMI 232
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
+ L++ G E EA+ + +M G+ D
Sbjct: 233 SLLVQGGRCE-------------------------------EAVQVLYDMVALGVRPDGV 261
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESVFRT 234
TF S L AC L L G+++HAF++++D N FV SALVDMY + + +A VF
Sbjct: 262 TFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDM 321
Query: 235 MA--WKNVVSWTAMLVGYGQN-GCSEEAVKIFCNMQ-RNGIEPDDFTLGSVISSCANLAS 290
+ + + W AM+ GY Q+ G EEA+++F M+ G P + T+ V+ +CA
Sbjct: 322 VPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEV 381
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
HG + + S V NAL+ Y + G ++++H +F +++RD VSW L++G
Sbjct: 382 FTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITG 441
Query: 351 YAKFGKANETIDLFEKML--------------------SHGLKPDEVTLIGVLSACSRAG 390
G +E L +M P+ +TL+ +L C+
Sbjct: 442 CIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLA 501
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATL 450
+G+ V+ + + + ++D+ ++ G L A++ +++P + I W L
Sbjct: 502 APARGKEIHGYAVR-HALESDLAVGSALVDMYAKCGCLALARAVFDRLPR-RNVITWNVL 559
Query: 451 LSSCRIHG 458
+ + +HG
Sbjct: 560 IMAYGMHG 567
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 134/301 (44%), Gaps = 13/301 (4%)
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRND--HKDNVFVGSALVDMYCKCKSIKYAES 230
D F + + L + IH +R H+ V +AL+ Y +C + A +
Sbjct: 47 DHFALPPAIKSAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALA 106
Query: 231 VFRTMA--WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL 288
+F ++ VS+ +++ A+ +M + E FTL SV+ +C++L
Sbjct: 107 LFAATPPDLRDAVSYNSLISALCLFRRWGHALDALRDMLADH-EVSSFTLVSVLLACSHL 165
Query: 289 ASLEE--GTQFHGRSLVTGLISFITVS---NALVTFYGKCGNIEDSHRLF--NEMNVRDE 341
A G + H +L G + NAL++ Y + G ++D+ RLF + V D
Sbjct: 166 ADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDL 225
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEI 401
V+W ++S + G+ E + + M++ G++PD VT L ACSR L+ GR
Sbjct: 226 VTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAF 285
Query: 402 MVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIG-WATLLSSCRIHGNV 460
++K+ + + ++D+ + ++ A+ + +P +G W ++ HG +
Sbjct: 286 VLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGM 345
Query: 461 E 461
+
Sbjct: 346 D 346
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 92/212 (43%), Gaps = 13/212 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + ++WN+LI + HG ++A+ +++ M+ +G + +TF L S VD
Sbjct: 548 LPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDR 607
Query: 61 GRQI-HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP--EKNIVMYNTMITG 117
G ++ G +GF ++ + +VD+ + G + +A + E + ++TM+
Sbjct: 608 GLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGA 667
Query: 118 LLRRGLVEESR----RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
V+ R RLF D+ S + + GL + ++ MR G+A +
Sbjct: 668 CRLHRNVKLGRIAAERLFELEPDEAS-HYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKE 726
Query: 174 QFTF-----GSVLTACGGLLALEEGKQIHAFI 200
G++ G A E Q+HA +
Sbjct: 727 PGCSWIELDGAIHRFMAGESAHPESAQVHAHM 758
>gi|356534396|ref|XP_003535741.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g04780-like [Glycine max]
Length = 632
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/594 (39%), Positives = 354/594 (59%), Gaps = 39/594 (6%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR H I++ G + + L++MY+K L++ ++ DE+ K++++ NT I L
Sbjct: 69 GRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLVKSLILXNTRIGAL-- 126
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
QN +R+A+ L M+ E ++FT SV
Sbjct: 127 -----------------------------TQNAEDRKALKLLIRMQREVTPFNEFTISSV 157
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C A+ E Q+HAF I+ N FV +AL+ +Y KC SIK A +F +M KN
Sbjct: 158 LCNCAFKCAILECMQLHAFSIKAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMPEKNA 217
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+W++M+ GY QNG +EA+ +F N Q G + D F + S +S+CA LA+L EG Q H
Sbjct: 218 VTWSSMMAGYVQNGFHDEALLLFHNAQLMGFDQDPFNISSAVSACAGLATLVEGKQVHAM 277
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNE-MNVRDEVSWTALVSGYAKFGKANE 359
S +G S I V+++L+ Y KCG I +++ +F + VR V W A++SG+A+ A E
Sbjct: 278 SHKSGFGSNIYVASSLIDMYAKCGCIREAYLVFEGFVEVRSIVLWNAMISGFARHALAQE 337
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ LFEKM G PD+VT + VL+ACS GL E+G+ YF++MV+++ + P HY+CMI
Sbjct: 338 AMILFEKMQQRGFFPDDVTYVSVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMI 397
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWAT-------LLSSCRIHGNVEIGKWAAESLLE 472
DIL RAG +++A I +M F + W + + +SCRI+GN+E + AA+ L E
Sbjct: 398 DILGRAGLVQKAYDLIGRMSFNATSSMWGSVRGLSXLIKASCRIYGNIEFAEIAAKHLFE 457
Query: 473 LDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDW 532
++P N +++LL++IYA+ K D V++ R+ +RE VRK+ G SWI+ K+++H F+ +
Sbjct: 458 MEPNNAGNHILLANIYAANKKSDEVARARKLLRETDVRKERGTSWIEIKNKIHSFTVGER 517
Query: 533 SSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFI 592
+ P D YA+L+ L ++ K Y D ++ LHDVE S K +L HHSEKLAI FGL+ +
Sbjct: 518 NHPQIDDNYAKLDNLVVELKKLNYKVDTNNDLHDVEESRKHMLLGHHSEKLAITFGLVCL 577
Query: 593 PPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDF 646
P +PIR++KNLR+C DCH K +SK REI+VRD RFH FK+G CSCG+F
Sbjct: 578 PTEIPIRIIKNLRICGDCHTFMKLVSKFASREIIVRDTNRFHHFKDGLCSCGEF 631
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 156/321 (48%), Gaps = 33/321 (10%)
Query: 40 LSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRG 99
+ T S++L + + + Q+H +K S FV + L+ +YAK I DA +
Sbjct: 149 FNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVXTALLHVYAKCSSIKDASQM 208
Query: 100 FDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAI 159
F+ +PEKN V +++M+ G + QNG EA+
Sbjct: 209 FESMPEKNAVTWSSMMAGYV-------------------------------QNGFHDEAL 237
Query: 160 DLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMY 219
LF +L G D F S ++AC GL L EGKQ+HA ++ N++V S+L+DMY
Sbjct: 238 LLFHNAQLMGFDQDPFNISSAVSACAGLATLVEGKQVHAMSHKSGFGSNIYVASSLIDMY 297
Query: 220 CKCKSIKYAESVFRT-MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
KC I+ A VF + +++V W AM+ G+ ++ ++EA+ +F MQ+ G PDD T
Sbjct: 298 AKCGCIREAYLVFEGFVEVRSIVLWNAMISGFARHALAQEAMILFEKMQQRGFFPDDVTY 357
Query: 279 GSVISSCANLASLEEGTQFHGRSLVT-GLISFITVSNALVTFYGKCGNIEDSHRLFNEMN 337
SV+++C+++ EEG ++ + L + + ++ G+ G ++ ++ L M+
Sbjct: 358 VSVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVQKAYDLIGRMS 417
Query: 338 VRDEVSWTALVSGYAKFGKAN 358
S V G + KA+
Sbjct: 418 FNATSSMWGSVRGLSXLIKAS 438
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 92/218 (42%), Gaps = 22/218 (10%)
Query: 277 TLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
L ++ CA S G H + + GL I S L+ Y KC + + + +EM
Sbjct: 52 NLHYLLQLCAKTGSSMGGRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEM 111
Query: 337 NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS-RAGLVEKG 395
V+ + + + + + + L +M +E T+ VL C+ + ++E
Sbjct: 112 LVKSLILXNTRIGALTQNAEDRKALKLLIRMQREVTPFNEFTISSVLCNCAFKCAILECM 171
Query: 396 R-HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
+ H F I + I T ++ + ++ +++A MP +A+ W+++++
Sbjct: 172 QLHAFSI---KAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMP-EKNAVTWSSMMA-- 225
Query: 455 RIHGNVEIGKWAAESLL----------ELDPYNPASYV 482
G V+ G + E+LL + DP+N +S V
Sbjct: 226 ---GYVQNG-FHDEALLLFHNAQLMGFDQDPFNISSAV 259
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/620 (39%), Positives = 352/620 (56%), Gaps = 64/620 (10%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
++IH I+K G + + L+D Y K L+ DA FDE+P+
Sbjct: 21 AKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQ--------------- 65
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAMDQFTFGS 179
+D +SW +++T Q L + + +F M + L D F + +
Sbjct: 66 ----------------RDHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYAT 109
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L AC L +L GKQ+HA + + D+ V S+LVDMY KC A SVF ++ K
Sbjct: 110 LLKACASLCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSILVKT 169
Query: 240 VVSWTAMLVGYGQNGCSEEAVKI-------------------------------FCNMQR 268
VSWTAML GY ++G +EA+++ F M+R
Sbjct: 170 SVSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRR 229
Query: 269 NGIE-PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIE 327
G++ D L SV+ +CANLA L G Q HG + +G S + +SNALV Y KC +I
Sbjct: 230 EGVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDIL 289
Query: 328 DSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS 387
+ +FN M RD VSWT+++ G A+ G+A E +DL+++M+ +KP+EVT +G++ ACS
Sbjct: 290 AARNVFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACS 349
Query: 388 RAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGW 447
AGLV KGR F+ M+++Y I P +TC +D+LSR+G L EA+ I MP PD W
Sbjct: 350 HAGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTW 409
Query: 448 ATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREK 507
A LLS+C+ HGN E+G A+ LL L+ + P++YVLLS++YA GKW+ +S++R+ M +
Sbjct: 410 AALLSACKHHGNTEMGVRIADRLLSLNMHEPSTYVLLSNVYAGAGKWEQMSRVRKLMTDM 469
Query: 508 GVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDV 567
V++ PG S I +F A + P D+I+ L++L+ +M K GY+PD S VLHD+
Sbjct: 470 EVKRKPGYSSIDLGKESQVFHAGETCHPMKDEIFGLLKELDAEMRKRGYIPDTSYVLHDM 529
Query: 568 ELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILV 627
E EK + L HSE+ A+A+GLL PG IR+VKNLR+C DCH K S I +EI+V
Sbjct: 530 EEQEKERELFWHSERWAVAYGLLKAVPGTVIRIVKNLRICGDCHTFLKLTSSIVHKEIIV 589
Query: 628 RDAVRFHLFKNGECSCGDFW 647
RDA R+H FK+G CSC DFW
Sbjct: 590 RDATRYHHFKDGRCSCNDFW 609
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 194/377 (51%), Gaps = 13/377 (3%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSW +++ + N + +++ M ++T+L +S + L
Sbjct: 63 MPQRDHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRL 122
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H + F V S LVDMYAK GL A+ FD + K V + M++G R
Sbjct: 123 GKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYAR 182
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL-AMDQFTFGS 179
GL +E+ LF ++ SWT +I+GL+Q+G + +F EMR EG+ +D S
Sbjct: 183 SGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSS 242
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
V+ AC L L GKQIH +I + ++ +F+ +ALVDMY KC I A +VF M ++
Sbjct: 243 VVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRD 302
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VVSWT+++VG Q+G ++EA+ ++ M I+P++ T +I +C++ G G
Sbjct: 303 VVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSH-----AGLVSKG 357
Query: 300 RSLVTGLISFITVSNALVTF------YGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYA 352
R L +I +S +L F + G++ ++ L M + DE +W AL+S
Sbjct: 358 RKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACK 417
Query: 353 KFGKANETIDLFEKMLS 369
G + + +++LS
Sbjct: 418 HHGNTEMGVRIADRLLS 434
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 154/344 (44%), Gaps = 40/344 (11%)
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C A K+IHA I+++ + + L+D Y KC ++ A +F M ++
Sbjct: 9 LKLCTKHQAPLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDH 68
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VSW ++L Y Q + + IF M + ++PD F +++ +CA+L SL G Q H
Sbjct: 69 VSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHA 128
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
R +++ + V ++LV Y KCG + +F+ + V+ VSWTA++SGYA+ G +E
Sbjct: 129 RFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDE 188
Query: 360 TIDLFEKMLSHGLKP--------------------------------DEVTLIGVLSACS 387
++LF + L D + L V+ AC+
Sbjct: 189 AMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACA 248
Query: 388 RAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGW 447
++ G+ +++ G ++D+ ++ + A++ N+M D + W
Sbjct: 249 NLAVLGLGKQIHGLVIGS-GYESCLFISNALVDMYAKCSDILAARNVFNRM-LHRDVVSW 306
Query: 448 ATLLSSCRIHGNVE--IGKWAAESLLELDPYNPASYVLLSSIYA 489
+++ HG + + + L E+ P N ++V L IYA
Sbjct: 307 TSIIVGAAQHGRAKEALDLYDQMVLAEIKP-NEVTFVGL--IYA 347
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 233/605 (38%), Positives = 361/605 (59%), Gaps = 33/605 (5%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
+ +L +R + G+++H H++K + ++ + L+ Y K + DA++ DE+P
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
E K+ +SWT MI+ Q G EA+ +F E
Sbjct: 115 E-------------------------------KNVVSWTAMISRYSQTGHSSEALTVFAE 143
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M ++FTF +VLT+C L GKQIH I++ ++ ++FVGS+L+DMY K
Sbjct: 144 MMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQ 203
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
IK A +F + ++VVS TA++ GY Q G EEA+++F + G+ P+ T S++++
Sbjct: 204 IKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTA 263
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
+ LA L+ G Q H L L + + N+L+ Y KCGN+ + RLF+ M R +SW
Sbjct: 264 LSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISW 323
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
A++ GY+K G E ++LF M +KPD VTL+ VLS CS + + G + F+ MV
Sbjct: 324 NAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMV 383
Query: 404 K-EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
EYG +P +HY C++D+L RAGR++EA FI +MP P A +LL +CR+H +V+I
Sbjct: 384 AGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDI 443
Query: 463 GKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKS 522
G+ L+E++P N +YV+LS++YAS G+W V+ +R M +K V K+PG SWI+++
Sbjct: 444 GESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQ 503
Query: 523 RVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEK 582
+H F A+D + P +++ A++++++ KM + GYVPD+S VL+DV+ +K KML HSEK
Sbjct: 504 TLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEK 563
Query: 583 LAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECS 642
LA+ FGL+ G+PIRV KNLR+C DCHN K SK+ +RE+ +RD RFH +G CS
Sbjct: 564 LALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICS 623
Query: 643 CGDFW 647
CGD+W
Sbjct: 624 CGDYW 628
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 169/314 (53%), Gaps = 7/314 (2%)
Query: 146 ITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH 205
I+ L NG +EA+ EM + G M + ++L AC AL +G+++HA +I+ +
Sbjct: 27 ISQLCSNGRLQEAL---LEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRY 83
Query: 206 KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCN 265
++ + L+ Y KC ++ A V M KNVVSWTAM+ Y Q G S EA+ +F
Sbjct: 84 LPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAE 143
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M R+ +P++FT +V++SC + L G Q HG + S I V ++L+ Y K G
Sbjct: 144 MMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQ 203
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
I+++ +F + RD VS TA+++GYA+ G E +++F ++ S G+ P+ VT +L+A
Sbjct: 204 IKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTA 263
Query: 386 CSRAGLVEKGRH-YFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDA 444
S L++ G+ + ++ +E + + +ID+ S+ G L A+ + MP A
Sbjct: 264 LSGLALLDHGKQAHCHVLRRELPFYAVLQN--SLIDMYSKCGNLSYARRLFDNMP-ERTA 320
Query: 445 IGWATLLSSCRIHG 458
I W +L HG
Sbjct: 321 ISWNAMLVGYSKHG 334
>gi|357111099|ref|XP_003557352.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 685
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 246/652 (37%), Positives = 370/652 (56%), Gaps = 45/652 (6%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P +W I+G A G D + + M G + + +L + R ++ G
Sbjct: 73 PKRSASAWTAFIAGCARSGRHMDGLSAFTEMRAKGGAEPNAFVLAAVLRCCAGLRDMESG 132
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+ IHG +L+ G V + + ++DMYAK G KR F + + + V +N +I+ ++
Sbjct: 133 KCIHGWMLRNGAHLDVVLCNAVLDMYAKCGDYECTKRAFKAMTKIDAVSWNIVISACMQN 192
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G + S +LF +D+ SW T+I+GLM+NG +A+D M + + +T+ + L
Sbjct: 193 GDILGSMQLFDVSPLRDTSSWNTVISGLMRNGCAAKALDCLYRMARARVVFNHYTYSTAL 252
Query: 182 TACGGLLALEE-GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
A G+L+L++ G+Q+H ++ + FV S+L+DMYCKC S++ A +F + W +
Sbjct: 253 -ALAGMLSLQDLGRQLHGRVLTAAVDTDAFVRSSLMDMYCKCGSMETAVLIFDS--WSQL 309
Query: 241 V-----SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
+W+AM+ GY QNG EEA + F +M R G+ FTL S I++CAN +E+G
Sbjct: 310 TGDMNFAWSAMVAGYVQNGREEEAFEFFRSMLREGVAAHQFTLTSAIAACANAGMVEQG- 368
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
R+F+ ++ WT+++ YA G
Sbjct: 369 -----------------------------------RIFDRACAKNVALWTSMLCSYASHG 393
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
K I+LF +M + + P+E+TL+GVLSACS LV +G H+F++M EYGI P +HY
Sbjct: 394 KGRMAIELFNRMTAEKITPNEITLVGVLSACSHGRLVNEGDHFFKLMQDEYGIVPSIEHY 453
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
CM+D+ RAG L +A +FI + +AI W TLLS+CR+H ++E K A+E+L++L+
Sbjct: 454 NCMVDLYGRAGMLYKAHNFIKENNIKHEAIVWKTLLSACRLHKHMEYAKLASENLIQLEE 513
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSP 535
+ SYV+LS++YA+ KW S+LR +MRE+ V K PG SWI K+ +H F A D + P
Sbjct: 514 CDAGSYVMLSNVYATHSKWLDTSKLRSSMRERRVWKQPGRSWIHLKNIMHTFVAGDTAHP 573
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
S +IYA LEKL ++ GY V HDVE ++ L HSEKLAIAFG++ P G
Sbjct: 574 RSAEIYAYLEKLMERLKDLGYTSRTDLVAHDVEEEQRETALKFHSEKLAIAFGIISTPSG 633
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
P+R+ KNLRVC DCH A KY+S+ T REI+VRD RFH FK+ +CSC DFW
Sbjct: 634 TPLRIFKNLRVCVDCHEAIKYVSQATDREIVVRDLYRFHHFKDAKCSCEDFW 685
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 183/399 (45%), Gaps = 49/399 (12%)
Query: 104 PEKNIVMYNTMITGL----LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAI 159
PEK + + I L +R +R+L + + +WT I G ++G + +
Sbjct: 38 PEKGLARISQEIVSLPISCVRGHHFHNARKLLDETPKRSASAWTAFIAGCARSGRHMDGL 97
Query: 160 DLFREMRLEGLAM-DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDM 218
F EMR +G A + F +VL C GL +E GK IH +++RN +V + +A++DM
Sbjct: 98 SAFTEMRAKGGAEPNAFVLAAVLRCCAGLRDMESGKCIHGWMLRNGAHLDVVLCNAVLDM 157
Query: 219 YCKCKSIKYAESVFRTM------AWKNVV-------------------------SWTAML 247
Y KC + + F+ M +W V+ SW ++
Sbjct: 158 YAKCGDYECTKRAFKAMTKIDAVSWNIVISACMQNGDILGSMQLFDVSPLRDTSSWNTVI 217
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
G +NGC+ +A+ M R + + +T + ++ L+ + G Q HGR L +
Sbjct: 218 SGLMRNGCAAKALDCLYRMARARVVFNHYTYSTALALAGMLSLQDLGRQLHGRVLTAAVD 277
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFN---EMNVRDEVSWTALVSGYAKFGKANETIDLF 364
+ V ++L+ Y KCG++E + +F+ ++ +W+A+V+GY + G+ E + F
Sbjct: 278 TDAFVRSSLMDMYCKCGSMETAVLIFDSWSQLTGDMNFAWSAMVAGYVQNGREEEAFEFF 337
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
ML G+ + TL ++AC+ AG+VE+GR + K + +T M+ +
Sbjct: 338 RSMLREGVAAHQFTLTSAIAACANAGMVEQGRIFDRACAKNVAL------WTSMLCSYAS 391
Query: 425 AGRLEEAKSFINKMP---FPPDAIGWATLLSSCRIHGNV 460
G+ A N+M P+ I +LS+C HG +
Sbjct: 392 HGKGRMAIELFNRMTAEKITPNEITLVGVLSACS-HGRL 429
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 253/647 (39%), Positives = 365/647 (56%), Gaps = 33/647 (5%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRC-VDL 60
P S+N+LI G DA+ ++ ML D + + T + + S SR C + +
Sbjct: 131 PPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANT-VKSCSRMCDLSV 189
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR + + K GF FV + L+ MYA G + A
Sbjct: 190 GRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAA------------------------ 225
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
LF ++ K I+W MI G ++NG +E +++F+ M D+ T SV
Sbjct: 226 -------HVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSV 278
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
TACG L G+ I + + + +ALVDMY KC + A +F M ++V
Sbjct: 279 ATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDV 338
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+W+AM+ GY Q+ EA+ IF MQ + P+D T+ SV+S+CA L +LE G H
Sbjct: 339 VAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSY 398
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
L + + ALV FY KCG I+D+ + F M VR+ +WTAL+ G A G++ E
Sbjct: 399 IRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREA 458
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++LF ML ++P +VT IGVL ACS LVE+GR +F M ++YGI P +HY CM+D
Sbjct: 459 LELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVD 518
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG ++EA FI MP P+A+ W LLS+C +H NVEIG+ A + ++ LDP + +
Sbjct: 519 LLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGN 578
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
Y+LLS+ YAS G+W + + +R+ M+EKGV K PGCS I+ + + F A+D P +I
Sbjct: 579 YILLSNTYASVGQWKNAAMVRKEMKEKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEI 638
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y ++ ++ + GY+P+ + DV+ EK ++HHSEKLAIAFGL+ PG IR+
Sbjct: 639 YEKVHEMIENIKMVGYIPNTADARLDVDEYEKQVSVSHHSEKLAIAFGLMKSRPGATIRL 698
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCH+ATK ISK+ REI+VRD RFH FK+G CSC D+W
Sbjct: 699 SKNLRVCIDCHSATKLISKVYNREIIVRDRNRFHHFKDGLCSCNDYW 745
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 105/255 (41%), Gaps = 46/255 (18%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D V+W+ +ISG+ +A+ ++N M + N + +T ++L + ++
Sbjct: 333 MHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEV-NPNDVTMVSVLSACAVLGALET 391
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +H +I + V +G+ LVD YAK G I DA + F+ +P +N + +I G
Sbjct: 392 GKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKG--- 448
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ NG REA++LF M + TF V
Sbjct: 449 ----------------------------MASNGRSREALELFSSMLEANIEPTDVTFIGV 480
Query: 181 LTACGGLLALEEGK-------QIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
L AC +EEG+ Q + R +H +VD+ + I A R
Sbjct: 481 LLACSHGCLVEEGRRHFTSMTQDYGICPRIEHY------GCMVDLLGRAGLIDEAYQFIR 534
Query: 234 TMAWK-NVVSWTAML 247
M + N V W A+L
Sbjct: 535 NMPIEPNAVVWRALL 549
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +W LI G AS+G +A+++++ ML+ + + +TF +L+ S V+
Sbjct: 434 MPVRNTWTWTALIKGMASNGRSREALELFSSMLEANI-EPTDVTFIGVLLACSHGCLVEE 492
Query: 61 GRQIHGHILK-FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITG 117
GR+ + + +G + +VD+ + GLI +A + +P E N V++ +++
Sbjct: 493 GRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSA 551
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 247/642 (38%), Positives = 372/642 (57%), Gaps = 32/642 (4%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
+SWN +I G++ A ++ M + ++ +T +L + ++IHG
Sbjct: 365 ISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHG 424
Query: 67 HILKFGF-GSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
+ L+ GF S V + V YAK G ++ A+
Sbjct: 425 YALRHGFIQSDELVANAFVAGYAKCGSLHYAEG--------------------------- 457
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
+F GM+ K SW +I G +QNG R+A+DL+ MR GL D FT S+L+AC
Sbjct: 458 ----VFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACA 513
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
L +L GK+IH ++RN + + F+ +LV +Y +C I A+ F M KN+V W
Sbjct: 514 RLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNT 573
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
M+ G+ QN +A+ +F M + I PD+ ++ + +C+ +++L G + H ++ +
Sbjct: 574 MINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSH 633
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
L V+ +L+ Y KCG +E S +F+ ++++ EV+W L++GY G + I+LF+
Sbjct: 634 LTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFK 693
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
M + G +PD VT I +L+AC+ AGLV +G Y M +GI+P +HY C++D+L RA
Sbjct: 694 SMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRA 753
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
GRL EA +N++P PD+ W++LLSSCR + +++IG+ A LLEL P +YVL+S
Sbjct: 754 GRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLIS 813
Query: 486 SIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELE 545
+ YA GKWD V ++R+ M+E G++KD GCSWI+ +V F D S S +I
Sbjct: 814 NFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDESLLQSMKIQQTWI 873
Query: 546 KLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
+L +K+ K GY PD S VLH++E EKIK+L +HSEKLAI+FGLL G +RV KNLR
Sbjct: 874 ELEKKINKIGYKPDTSCVLHELEEDEKIKILRNHSEKLAISFGLLNTAKGTTLRVCKNLR 933
Query: 606 VCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+C DCHNA K +SKI +REI+VRD RFH FKNG CSCGD+W
Sbjct: 934 ICVDCHNAIKLVSKIDKREIIVRDNKRFHHFKNGFCSCGDYW 975
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 126/448 (28%), Positives = 211/448 (47%), Gaps = 38/448 (8%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN L+SG+ + DAV V+ M+ T ++ V LG +HG
Sbjct: 163 WNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFA 222
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
LK S VFVG+ L+ MY K G + A + FD++P++N+V +N+++ L G+ EES
Sbjct: 223 LKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESY 282
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
LF+G+ + D EGL D T +V+ C
Sbjct: 283 GLFKGLLNGD-----------------------------EGLMPDVATMVTVIPLCARQG 313
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
+ G H ++ + V S+L+DMY KC + A +F T KNV+SW +M+
Sbjct: 314 EVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTNE-KNVISWNSMIG 372
Query: 249 GYGQNGCSEEAVKIFCNMQ-RNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
GY ++ A ++ MQ + ++ ++ TL +V+ C + + HG +L G I
Sbjct: 373 GYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFI 432
Query: 308 -SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
S V+NA V Y KCG++ + +F M + SW AL+ G+ + G + +DL+
Sbjct: 433 QSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLL 492
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC--MIDILSR 424
M GL+PD T+ +LSAC+R + G+ M++ G D + C ++ + +
Sbjct: 493 MRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRN-GFEL--DEFICISLVSLYVQ 549
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLS 452
G++ AK F + M + + W T+++
Sbjct: 550 CGKILLAKLFFDNME-EKNLVCWNTMIN 576
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 178/373 (47%), Gaps = 45/373 (12%)
Query: 19 HGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI-LKFGFGSYV 77
++ND V N K +G +L + + +++GR+IH I F + V
Sbjct: 78 QSNLNDVVSSSNSKPKQLIG--------LLLQLCGEYKNIEIGRKIHNFISTSPHFQNDV 129
Query: 78 FVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDK 137
+ + LV MY+ YD+ F+ KN+ +
Sbjct: 130 VLITRLVTMYSICDSPYDSCLVFNASRRKNLFL--------------------------- 162
Query: 138 DSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAMDQFTFGSVLTACGGLLALEEGKQI 196
W +++G ++N L R+A+ +F EM L D FT V+ AC G+ + G+ +
Sbjct: 163 ----WNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAV 218
Query: 197 HAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCS 256
H F ++ +VFVG+AL+ MY K ++ A VF M +N+VSW +++ +NG
Sbjct: 219 HGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVF 278
Query: 257 EEAVKIFCNMQR--NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSN 314
EE+ +F + G+ PD T+ +VI CA + G FHG +L GL + V++
Sbjct: 279 EESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNS 338
Query: 315 ALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM-LSHGLK 373
+L+ Y KCG + ++ LF + N ++ +SW +++ GY+K +L KM + +K
Sbjct: 339 SLLDMYSKCGYLCEARVLF-DTNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVK 397
Query: 374 PDEVTLIGVLSAC 386
+EVTL+ VL C
Sbjct: 398 VNEVTLLNVLPVC 410
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 146/278 (52%), Gaps = 7/278 (2%)
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
G +L CG +E G++IH FI + H +++V + + LV MY C S + VF
Sbjct: 97 GLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASR 156
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGT 295
KN+ W A+L GY +N +AV +F M PD+FTL VI +C + + G
Sbjct: 157 RKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGE 216
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
HG +L T ++S + V NAL+ YGK G +E + ++F++M R+ VSW +++ + G
Sbjct: 217 AVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENG 276
Query: 356 KANETIDLFEKMLS--HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
E+ LF+ +L+ GL PD T++ V+ C+R G V G + + +K G+
Sbjct: 277 VFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALK-LGLCGELK 335
Query: 414 HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
+ ++D+ S+ G L EA+ + + I W +++
Sbjct: 336 VNSSLLDMYSKCGYLCEARVLFDTN--EKNVISWNSMI 371
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 247/663 (37%), Positives = 373/663 (56%), Gaps = 52/663 (7%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V+WN ++S G +A++V M+ G+ ITF++ L S + LGR++H
Sbjct: 237 VTWNTMVSLLVQSGRCGEAIEVIYDMVARGV-RPDGITFASALPACSQLEMLSLGREMHA 295
Query: 67 HILK-FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
++LK + FV S LVDMYA + A+R FD +P G + GL
Sbjct: 296 YVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVP-----------GGHRQLGL-- 342
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQFTFGSVLTAC 184
W M+ G Q G++ EA++LF M E G+ + T VL AC
Sbjct: 343 ----------------WNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPAC 386
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+ +H ++++ DN FV +AL+D+Y + ++ A +F + ++VVSW
Sbjct: 387 ARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWN 446
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNG------------------IEPDDFTLGSVISSCA 286
++ G G +A ++ MQ+ G + P++ TL +++ CA
Sbjct: 447 TLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCA 506
Query: 287 NLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTA 346
LA+ +G + HG ++ L S I V +ALV Y KCG + S +F+ + R+ ++W
Sbjct: 507 MLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNV 566
Query: 347 LVSGYAKFGKANETIDLFEKM-LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE 405
L+ Y G +E I LF++M +S+ KP+EVT I L+ACS +G+V++G F M +
Sbjct: 567 LIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRN 626
Query: 406 YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM-PFPPDAIGWATLLSSCRIHGNVEIGK 464
+G++P D + C +DIL RAGRL+EA S I M P W++ L +CR+H NV +G+
Sbjct: 627 HGVQPTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGE 686
Query: 465 WAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRV 524
AAE L +L+P + YVLL +IY++ G W+ S++R MR++GV K+PGCSWI+ +
Sbjct: 687 IAAERLFQLEPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVI 746
Query: 525 HIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLA 584
H F A + + P S ++A ++ L +M +GY PD SSVLHD+E SEK +L +HSEKLA
Sbjct: 747 HRFMAGESAHPESTLVHAHMDALWERMRNQGYTPDTSSVLHDIEESEKAAILRYHSEKLA 806
Query: 585 IAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCG 644
IAFGLL PPG IRV KNLRVC+DCH A K+IS++ REI++RD RFH F +G CSCG
Sbjct: 807 IAFGLLRTPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFVDGACSCG 866
Query: 645 DFW 647
D+W
Sbjct: 867 DYW 869
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 145/549 (26%), Positives = 244/549 (44%), Gaps = 73/549 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V++N LI+ A+ ML +G S S +L S + L
Sbjct: 122 MPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRL 181
Query: 61 GRQIHGHILKFGF--GSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
GR+ H LK GF G F + L+ MYA+LG
Sbjct: 182 GREAHAFALKNGFLDGDERFAFNALLSMYARLG--------------------------- 214
Query: 119 LRRGLVEESRRLFRGMKDKDS-----ISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
LV++++ LF + DS ++W TM++ L+Q+G EAI++ +M G+ D
Sbjct: 215 ----LVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPD 270
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRN-DHKDNVFVGSALVDMYCKCKSIKYAESVF 232
TF S L AC L L G+++HA+++++ D N FV SALVDMY + + A VF
Sbjct: 271 GITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVF 330
Query: 233 RTM--AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQ-RNGIEPDDFTLGSVISSCANLA 289
+ + + W AM+ GY Q G EEA+++F M+ G+ P + T+ V+ +CA
Sbjct: 331 DMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSE 390
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
+ HG L G+ V NAL+ Y + G++E + +F + RD VSW L++
Sbjct: 391 TFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLIT 450
Query: 350 GYAKFGKANETIDLFEKMLSHG------------------LKPDEVTLIGVLSACSRAGL 391
G G ++ L +M G + P+ VTL+ +L C+
Sbjct: 451 GCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAA 510
Query: 392 VEKGRHYFEIMVKEYGIRPIHDH----YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGW 447
KG+ + Y +R D + ++D+ ++ G L +++ +++P + I W
Sbjct: 511 PAKGKE-----IHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLP-KRNVITW 564
Query: 448 ATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYAS--KGKWDHVSQLRRTM- 504
L+ + +HG + + ++ + P ++++ A G D +L +M
Sbjct: 565 NVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMK 624
Query: 505 REKGVRKDP 513
R GV+ P
Sbjct: 625 RNHGVQPTP 633
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 274 DDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFIT--VSNALVTFYGKCGNIEDSHR 331
D F L S A L SL HG +L L+ T V+NAL+T Y +CG++ +
Sbjct: 58 DHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALA 117
Query: 332 LFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS 387
LFN M RD V++ +L++ F + +D ML G TL+ VL ACS
Sbjct: 118 LFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACS 173
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 251/649 (38%), Positives = 377/649 (58%), Gaps = 42/649 (6%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW L+ GH +G+ +++ +++ M G+ + TFST L +D+GRQIH
Sbjct: 39 VSWTALMCGHIQNGNPLESLLLFSKMGLSGV-KPNDFTFSTNLKACGLLNGLDIGRQIHD 97
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+K GF VG+ ++DMY+K G I +A F+ +P +N+
Sbjct: 98 ICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNL------------------ 139
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
ISW MI G G +A+ LF++M+ G +D+FTF S L AC
Sbjct: 140 -------------ISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSD 186
Query: 187 LLALEEGKQIHAFIIRND--HKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L A++EG QIHAF+I + N V AL+D+Y KC + A VF + K+V+SWT
Sbjct: 187 LGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWT 246
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
A+++GY Q G E++++F ++ + I+ D F L S++ A+ A +++G Q H ++
Sbjct: 247 ALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKV 306
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
I+V N+++ Y KCG I ++ RLF+EM R+ +SWT +++GY K G E I LF
Sbjct: 307 PSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLF 366
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
++M +PD+VT + VL CS +GLVEKG+ YF + +GI+ +HY CM+D+L R
Sbjct: 367 DEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGR 426
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AGRL+EAK+ ++ MP + W TLLS+CR+HG++E+GK LL LD NP +YV++
Sbjct: 427 AGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENPVNYVMM 486
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S+IYA G W ++R ++ K ++K+ G SW++ VH F D + P +++I+ L
Sbjct: 487 SNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLTEKIHEIL 546
Query: 545 EKLNRKMIKE-GYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP-----I 598
+++ R+M +E GYV + LHDVE K+ L HSEKLAI GL + GL I
Sbjct: 547 KEMERRMKEELGYVYGVKYALHDVEEESKMDNLRVHSEKLAI--GLALVCGGLEEGRKVI 604
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RV KNLRVC DCH K +SKI + +VRDA RFH F++G CSC D+W
Sbjct: 605 RVFKNLRVCGDCHEFIKGLSKILRVVFVVRDANRFHRFEDGLCSCRDYW 653
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 125/424 (29%), Positives = 212/424 (50%), Gaps = 48/424 (11%)
Query: 72 GFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLF 131
GFG + + + L+ MY K G + A FD + ++N+V
Sbjct: 2 GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVV---------------------- 39
Query: 132 RGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALE 191
SWT ++ G +QNG E++ LF +M L G+ + FTF + L ACG L L+
Sbjct: 40 ---------SWTALMCGHIQNGNPLESLLLFSKMGLSGVKPNDFTFSTNLKACGLLNGLD 90
Query: 192 EGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYG 251
G+QIH ++ VG++++DMY KC I A +F M +N++SW AM+ GY
Sbjct: 91 IGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNLISWNAMIAGYT 150
Query: 252 QNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFI- 310
G E+A+ +F MQ G D+FT S + +C++L +++EG Q H + G + +
Sbjct: 151 VAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVN 210
Query: 311 -TVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
V+ AL+ Y KCG + + R+F+ + + +SWTAL+ GYA+ G E+++LF ++
Sbjct: 211 TAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQLRE 270
Query: 370 HGLKPDEVTLIGVLSACSRAGLVEKGR--HYFEIMVKEYGIRPIHDHYTC--MIDILSRA 425
++ D L ++ + LV++G+ H F I V G+ D C ++D+ +
Sbjct: 271 SSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPS-GV----DISVCNSILDMYLKC 325
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL--LELDPYNPASYVL 483
G + EA+ ++MP + I W +++ HG +GK A ++LD P
Sbjct: 326 GMINEAERLFSEMP-ARNVISWTVMITGYGKHG---LGKEAIRLFDEMQLDSTEPDDVTY 381
Query: 484 LSSI 487
L+ +
Sbjct: 382 LAVL 385
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 177/354 (50%), Gaps = 36/354 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +SWN +I+G+ G A+ ++ M + G G L TF++ L S +
Sbjct: 134 MPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVG-GFLDEFTFTSTLKACSDLGAIKE 192
Query: 61 GRQIHGHILKFGFGSYV--FVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G QIH ++ GF V V L+D+Y K G ++ A+R F + EK+++ + +I G
Sbjct: 193 GNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGY 252
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+ G + ES ++LFR++R + +D F
Sbjct: 253 AQEGNLAES-------------------------------MELFRQLRESSIQVDGFILS 281
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
S++ +++GKQ+HAF I+ ++ V ++++DMY KC I AE +F M +
Sbjct: 282 SMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPAR 341
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
NV+SWT M+ GYG++G +EA+++F MQ + EPDD T +V+ C++ +E+G ++
Sbjct: 342 NVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYF 401
Query: 299 GR-SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSG 350
R G+ + + +V G+ G ++++ L + M + V W L+S
Sbjct: 402 SRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSA 455
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 153/301 (50%), Gaps = 8/301 (2%)
Query: 208 NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQ 267
++ + + L+ MY KC + A VF M +NVVSWTA++ G+ QNG E++ +F M
Sbjct: 6 DLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMG 65
Query: 268 RNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIE 327
+G++P+DFT + + +C L L+ G Q H + TG V N+++ Y KCG I
Sbjct: 66 LSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRIN 125
Query: 328 DSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS 387
++ +F M VR+ +SW A+++GY G + + LF+KM G DE T L ACS
Sbjct: 126 EAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACS 185
Query: 388 RAGLVEKGRHYFEIMVKEYGIRPIHDHYT-CMIDILSRAGRLEEAKSFINKMPFPPDAIG 446
G +++G ++ + ++ +ID+ + G+L A+ + + I
Sbjct: 186 DLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIE-EKHVIS 244
Query: 447 WATLLSSCRIHGNV----EIGKWAAESLLELDPYNPASYVLLSSIYA--SKGKWDHVSQL 500
W L+ GN+ E+ + ES +++D + +S + + + +A +GK H +
Sbjct: 245 WTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAI 304
Query: 501 R 501
+
Sbjct: 305 K 305
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 66/127 (51%), Gaps = 3/127 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +SW ++I+G+ HG +A+++++ M D +T+ +L+ S V+
Sbjct: 338 MPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDST-EPDDVTYLAVLLGCSHSGLVEK 396
Query: 61 GRQIHGHILKF-GFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITGL 118
G++ + + G + V + +VD+ + G + +AK D +P E N+ ++ T+++
Sbjct: 397 GQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSAC 456
Query: 119 LRRGLVE 125
G +E
Sbjct: 457 RVHGDLE 463
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 246/643 (38%), Positives = 383/643 (59%), Gaps = 36/643 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V W L+I+ + G AV+++ ML+DG T S+M+ + + LG+Q+H
Sbjct: 215 VVWTLMITRYVQGGCAGKAVELFLGMLEDGF-EPDGYTMSSMVSACAEQGSAGLGQQLHS 273
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+L+ G S V LVDMY KL + E+++ E
Sbjct: 274 LVLRLGLVSDTCVSCGLVDMYTKLQM------------EQSM----------------EC 305
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQ-NGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
+R++F+ M + +SWT +I+G +Q G E A++L EM E + + T+ S+L AC
Sbjct: 306 ARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACA 365
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
L + G+QIHA +++ + VG+ALV MY + ++ A F + +N++S ++
Sbjct: 366 NLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSS 425
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
+ G++ S + ++ + FT S++S+ A + +G Q H S+ TG
Sbjct: 426 DIGETGRSNASWSS-----QIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTG 480
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEM-NVRDEVSWTALVSGYAKFGKANETIDLF 364
S +SN+LV+ Y +CG ++D+ R F+EM + + +SWT+++S AK G A + LF
Sbjct: 481 FESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLF 540
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
M+ G+KP++VT I VLSACS GLV++G+ YF M K++ + P +HY CM+D+L+R
Sbjct: 541 HDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLAR 600
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
+G ++EA FIN+MP DA+ W TLL +CR + N+EIG+ AA +++L+P +PA YVLL
Sbjct: 601 SGLVQEALEFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDPAPYVLL 660
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S++YA G WD V+++R MR + + K+ G SW+ + +H F A D S P + +IYA+L
Sbjct: 661 SNLYAHGGLWDEVARIRSLMRHRNLSKETGLSWMHVGNTIHEFRAGDTSHPRAQEIYAKL 720
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
L R++ GYVPD S VLHD+ K + L HSEK+A+AFGL+ P PIR+ KNL
Sbjct: 721 AVLIREIKDIGYVPDTSIVLHDMSDKLKEQCLLQHSEKIAVAFGLITTLPTKPIRIFKNL 780
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RVC+DCH+A KYISK T REI++RD+ RFH K+G+CSCG++W
Sbjct: 781 RVCADCHSAIKYISKSTGREIILRDSNRFHRMKDGKCSCGEYW 823
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/344 (31%), Positives = 184/344 (53%), Gaps = 8/344 (2%)
Query: 102 ELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKD-KDSISWTTMITGLMQNGLEREAID 160
E+ + + ++ N+++T + G V +RR+F GM+ +D +SWT M L +NG E+EA+
Sbjct: 73 EVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALV 132
Query: 161 LFREMRLEGLAMDQFTFGSVLTAC-GGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDM 218
L EM GL + FT + AC G L G + F I+ +V VG AL+DM
Sbjct: 133 LLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDM 192
Query: 219 YCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
+ + + A VF + + VV WT M+ Y Q GC+ +AV++F M +G EPD +T+
Sbjct: 193 FARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTM 252
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKC---GNIEDSHRLFNE 335
S++S+CA S G Q H L GL+S VS LV Y K ++E + ++F
Sbjct: 253 SSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKR 312
Query: 336 MNVRDEVSWTALVSGYAKF-GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEK 394
M + +SWTAL+SGY + G+ N ++L +ML+ ++P+ +T +L AC+ +
Sbjct: 313 MPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDS 372
Query: 395 GRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
GR V + I ++ ++ + + +G +EEA+ +++
Sbjct: 373 GRQ-IHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQL 415
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 223/471 (47%), Gaps = 56/471 (11%)
Query: 3 FHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGL-------GNLSRITFSTMLIMSSSR 55
D VSW + +G+ +A+ + ML+ GL + F L SS
Sbjct: 108 LRDLVSWTAMAFCLTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSS-- 165
Query: 56 RCVDLGRQIHGHILKFGF-GSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTM 114
G + G +K GF G+ V VG L+DM+A+ G + A++ F+ L E+ +V++ M
Sbjct: 166 -----GGTVLGFAIKTGFWGTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLM 220
Query: 115 ITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
IT + Q G +A++LF M +G D
Sbjct: 221 ITRYV-------------------------------QGGCAGKAVELFLGMLEDGFEPDG 249
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC---KSIKYAESV 231
+T S+++AC + G+Q+H+ ++R + V LVDMY K +S++ A V
Sbjct: 250 YTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKV 309
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGCSE-EAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS 290
F+ M NV+SWTA++ GY Q G E AV++ C M IEP+ T S++ +CANL+
Sbjct: 310 FKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSD 369
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
+ G Q H R + T + + V NALV+ Y + G +E++ + F+++ R+ +S + S
Sbjct: 370 QDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTS---SD 426
Query: 351 YAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP 410
+ G++N + ++ S + T +LSA + GL KG+ + +K G
Sbjct: 427 IGETGRSNASWS--SQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKT-GFES 483
Query: 411 IHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
++ + SR G L++A ++M + I W +++S+ HG+ E
Sbjct: 484 DKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAE 534
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 195/383 (50%), Gaps = 49/383 (12%)
Query: 1 MPFHDGVSWNLLISGHAS-HGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
MP H+ +SW LISG+ G N+AV++ ML + + + +T+S++L ++ D
Sbjct: 313 MPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESI-EPNHLTYSSLLKACANLSDQD 371
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
GRQIH ++K G+ VG+ LV MYA+ G + +A++ FD+L E+N++ ++ I
Sbjct: 372 SGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDI---- 427
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
G + + SW++ I E++D + + FTF S
Sbjct: 428 -------------GETGRSNASWSSQI----------ESMD---------VGVSTFTFAS 455
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK- 238
+L+A + +G+Q+HA I+ + + + ++LV MY +C + A F M
Sbjct: 456 LLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDH 515
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
NV+SWT+++ ++G +E A+ +F +M +G++P+D T +V+S+C+++ ++EG ++
Sbjct: 516 NVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYF 575
Query: 299 GRSLVTG--LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFG 355
RS+ LI + +V + G ++++ NEM + D + W L+ +
Sbjct: 576 -RSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKADALVWKTLLGACRTY- 633
Query: 356 KANETIDLFEKMLSH--GLKPDE 376
E I++ E H L+P +
Sbjct: 634 ---ENIEIGEIAARHVIDLEPQD 653
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/644 (36%), Positives = 370/644 (57%), Gaps = 33/644 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +SWN +++ + G D +K+ +L+ G ++ +TF++ L S+ C+
Sbjct: 459 MTERDLISWNSMMACYVQDGKCLDGLKILAELLQMG-KVMNHVTFASALAACSNPECLIE 517
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+ +H I+ GF ++ VG+ LV MY KLG++
Sbjct: 518 SKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMM-------------------------- 551
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
E++++ + M D ++W +I G +N EA+ ++ +R +G+ + T SV
Sbjct: 552 -----EAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSV 606
Query: 181 LTACGGLL-ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
L AC L+ G IHA I+ + + +V ++L+ MY KC + + +F + K+
Sbjct: 607 LGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKS 666
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
++W AM+ +GC EEA+KIF M+ G+ D F+ +++ ANLA LEEG Q HG
Sbjct: 667 PITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHG 726
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ G S + V+NA + YGKCG + D ++ + R +SW L+S +A+ G +
Sbjct: 727 LVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQK 786
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ F +ML G KPD VT + +LSAC+ GLV++G Y++ M +E+G+ P +H C+I
Sbjct: 787 ARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCII 846
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L R+GRL A+ FI +MP PP+ + W +LL++CRIHGN+E+ + AE LLELDP + +
Sbjct: 847 DLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDS 906
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+YVL S++ A+ GKW+ V LR+ M ++K P CSW+K K +VH F + P + +
Sbjct: 907 AYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASR 966
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
I A+L +L + + GYVPD S LHD++ +K L +HSE+LA+AFGL+ P +R
Sbjct: 967 ISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLR 1026
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSC 643
+ KNLRVC DCH+ K++S I R+I++RD RFH F G+CSC
Sbjct: 1027 IFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSC 1070
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/494 (26%), Positives = 239/494 (48%), Gaps = 43/494 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + SW+ ++SG+ G +AV ++ M G+ + S + S S D
Sbjct: 155 MRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADE 214
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+HG ++K G V+VG+ LV Y +GL+Y+A++
Sbjct: 215 GFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQK---------------------- 252
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
LF M D + +SWT+++ G +G E +++++ MR EG++ +Q TF +V
Sbjct: 253 ---------LFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATV 303
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
++CG L G Q+ II+ +D+V V ++L+ M+ S++ A VF M ++
Sbjct: 304 TSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDI 363
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SW AM+ Y +G E+++ F M+ E + TL S++S C+++ +L+ G HG
Sbjct: 364 ISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGL 423
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ GL S + + N L+T Y + G ED+ +F M RD +SW ++++ Y + GK +
Sbjct: 424 VVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDG 483
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY---TC 417
+ + ++L G + VT L+ACS + + + +++ + HD
Sbjct: 484 LKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALII----VAGFHDFLIVGNA 539
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL-LELDPY 476
++ + + G + EAK + MP PD + W L+ H E A ++ L +
Sbjct: 540 LVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALIGG---HAENEEPNEAVKAYKLIREKG 595
Query: 477 NPASYVLLSSIYAS 490
PA+Y+ + S+ +
Sbjct: 596 IPANYITMVSVLGA 609
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 194/389 (49%), Gaps = 36/389 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD- 59
MP H+ VSW L+ G++ G+ + + VY M ++G+ ++ TF+T + SS D
Sbjct: 257 MPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSG-NQNTFAT--VTSSCGLLEDQ 313
Query: 60 -LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
LG Q+ GHI+++GF V V + L+ M++
Sbjct: 314 VLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSS-------------------------- 347
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
VEE+ +F M + D ISW MI+ +GL RE++ F MR + T
Sbjct: 348 -----VEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLS 402
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
S+L+ C + L+ G+ IH +++ NV + + L+ +Y + + AE VF+ M +
Sbjct: 403 SLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTER 462
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+++SW +M+ Y Q+G + +KI + + G + T S +++C+N L E H
Sbjct: 463 DLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVH 522
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
+V G F+ V NALVT YGK G + ++ ++ M D V+W AL+ G+A+ + N
Sbjct: 523 ALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPN 582
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACS 387
E + ++ + G+ + +T++ VL ACS
Sbjct: 583 EAVKAYKLIREKGIPANYITMVSVLGACS 611
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 187/351 (53%), Gaps = 13/351 (3%)
Query: 108 IVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL 167
I NT+I + G +E +R +F M+ ++ SW+TM++G ++ GL EA+ LF +M
Sbjct: 129 IFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWG 188
Query: 168 EGLAMDQFTFGSVLTAC--GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI 225
G+ + F S++TAC G +A +EG Q+H F+++ +V+VG+ALV Y +
Sbjct: 189 LGVEPNGFMVASLITACSRSGYMA-DEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLV 247
Query: 226 KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
A+ +F M NVVSWT+++VGY +G E + ++ M++ G+ + T +V SSC
Sbjct: 248 YNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSC 307
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
L G Q G + G ++V+N+L++ + ++E++ +F+ MN D +SW
Sbjct: 308 GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWN 367
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE 405
A++S YA G E++ F M + + TL +LS CS ++ GR ++VK
Sbjct: 368 AMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVK- 426
Query: 406 YGIRPIHDHYTCMIDIL----SRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
G+ D C+ + L S AGR E+A+ M D I W ++++
Sbjct: 427 LGL----DSNVCICNTLLTLYSEAGRSEDAELVFQAMT-ERDLISWNSMMA 472
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 146/269 (54%), Gaps = 7/269 (2%)
Query: 193 GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
GK +HAF I +F + L++MY K +I++A VF M +N SW+ ML GY +
Sbjct: 113 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 172
Query: 253 NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASL-EEGTQFHGRSLVTGLISFIT 311
G EEAV +FC M G+EP+ F + S+I++C+ + +EG Q HG + TG++ +
Sbjct: 173 VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVY 232
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG 371
V ALV FYG G + ++ +LF EM + VSWT+L+ GY+ G E ++++++M G
Sbjct: 233 VGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEG 292
Query: 372 LKPDEVTLIGVLSACSRAGLVEKGRHYFEIM--VKEYGIRPIHDHYTCMIDILSRAGRLE 429
+ ++ T V S+C GL+E ++++ + +YG +I + S +E
Sbjct: 293 VSGNQNTFATVTSSC---GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVE 349
Query: 430 EAKSFINKMPFPPDAIGWATLLSSCRIHG 458
EA + M D I W ++S+ HG
Sbjct: 350 EACYVFDHMN-ECDIISWNAMISAYAHHG 377
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 89/177 (50%), Gaps = 7/177 (3%)
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
+ + S G H +V + I +N L+ Y K GNIE + +F+EM R+E SW+
Sbjct: 105 SEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWS 164
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG-LVEKGRHYFEIMVK 404
++SGY + G E + LF +M G++P+ + +++ACSR+G + ++G +VK
Sbjct: 165 TMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVK 224
Query: 405 EYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
GI + D Y T ++ G + A+ +MP + + W +L+ GN
Sbjct: 225 T-GI--LGDVYVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLMVGYSDSGN 277
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 245/647 (37%), Positives = 368/647 (56%), Gaps = 33/647 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
P D WN ++ ++ HG A+++Y M + + +F +L S+ +++
Sbjct: 133 FPDPDVFLWNAIVRCYSRHGFFGHAIEMYARM-QVACVSPDGFSFPCVLKACSALPALEM 191
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR++HG I + GF S VFV + LV +YAK G I A F L ++ IV
Sbjct: 192 GRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIV----------- 240
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SWT++I+G QNG EA+ +F EMR + D SV
Sbjct: 241 --------------------SWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSV 280
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A + LE GK IH +I+ + + +L +Y KC + A F + ++
Sbjct: 281 LRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSL 340
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+ W AM+ GY +NG +EEA+++F M+ I PD T+ S I++CA + SLE
Sbjct: 341 IFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEY 400
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ + + V+ +L+ Y KCG+++ + +F+ + +D V W+A++ GY G+ E+
Sbjct: 401 ISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRES 460
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
I LF M G+ P++VT +G+L+AC +GLVE+G F M ++YGI P H HY C++D
Sbjct: 461 IILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRM-RDYGIEPRHQHYACVVD 519
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG L+ A +F+ MP P W LLS+C+IH +V +G++AAE L LDPYN
Sbjct: 520 LLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGH 579
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YV LS++YAS WD V+++R MREKG+ K G S I+ ++ F A D + P S +I
Sbjct: 580 YVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEI 639
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
+ E+E L R++ + G+VP SVLHD+ E + L +HSE+LAIA+GL+ PPG +R+
Sbjct: 640 FEEVEDLERRLKEAGFVPHTESVLHDLNYEETEETLCNHSERLAIAYGLISTPPGTTLRI 699
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLR C +CH A K ISK+ REI+VRDA RFH FK+G CSCGD+W
Sbjct: 700 TKNLRACDNCHAAIKLISKLVSREIVVRDACRFHHFKDGACSCGDYW 746
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 108/339 (31%), Positives = 185/339 (54%), Gaps = 4/339 (1%)
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G V +R+LF D D W ++ ++G AI+++ M++ ++ D F+F VL
Sbjct: 121 GEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVL 180
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
AC L ALE G+++H I R+ + +VFV + LV +Y KC I A +VF + + +V
Sbjct: 181 KACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIV 240
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SWT+++ GY QNG EA++IF M++ + PD L SV+ + ++ LE G HG
Sbjct: 241 SWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCV 300
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ GL + +L + Y KCG++ + FN++ + W A++SGY K G A E I
Sbjct: 301 IKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAI 360
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE-IMVKEYGIRPIHDHYTCMID 420
+LF M S ++PD +T+ ++AC++ G +E R E I + E+ I + T +ID
Sbjct: 361 ELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVN--TSLID 418
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
++ G ++ A+ +++P D + W+ ++ +HG
Sbjct: 419 TYAKCGSVDMARFVFDRIP-DKDVVVWSAMMVGYGLHGQ 456
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 148/300 (49%), Gaps = 13/300 (4%)
Query: 195 QIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNG 254
QI+A ++ + F+ + LV+ + A +F +V W A++ Y ++G
Sbjct: 93 QIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHG 152
Query: 255 CSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSN 314
A++++ MQ + PD F+ V+ +C+ L +LE G + HG+ G S + V N
Sbjct: 153 FFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQN 212
Query: 315 ALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKP 374
LV Y KCG I ++ +F + R VSWT+++SGYA+ G+ E + +F +M ++P
Sbjct: 213 GLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRP 272
Query: 375 DEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSF 434
D + L+ VL A + +E G+ ++K G+ D + + ++ G + A+ F
Sbjct: 273 DWIALVSVLRAYTDVEDLEHGKSIHGCVIK-MGLECEFDLLISLTSLYAKCGHVMVARLF 331
Query: 435 INKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAES-----LLELDPYNPASYVLLSSIYA 489
N++ P I W ++S G V+ G +A E+ L++ P S + SSI A
Sbjct: 332 FNQVE-NPSLIFWNAMIS-----GYVKNG-YAEEAIELFRLMKSKNIRPDSITVTSSIAA 384
>gi|224140235|ref|XP_002323489.1| predicted protein [Populus trichocarpa]
gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/652 (36%), Positives = 376/652 (57%), Gaps = 5/652 (0%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SWN +IS S A++++ ++ ++ + T ST+L +
Sbjct: 264 MPQRDIASWNTMISSLVKGLSYEKALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQ 323
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR+IH + ++ G + + V + ++ Y + G + F+ +P ++I+ + MIT +
Sbjct: 324 GREIHAYAIRIGLENNLSVSNAIIGFYTRCGSLNHVAALFERMPVRDIITWTEMITAYME 383
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GLV+ + +F M +K+S+S+ ++TG +N +A++LF M EG + FT V
Sbjct: 384 FGLVDLAVDMFNKMPEKNSVSYNALLTGFCKNNEGLKALNLFVRMVQEGAELTDFTLTGV 443
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK-- 238
+ ACG LL LE +QIH FII+ + N + +AL+DM KC + A+ +F++++
Sbjct: 444 INACGLLLKLEISRQIHGFIIKFGFRSNACIEAALIDMCSKCGRMDDADRMFQSLSTDGG 503
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQF 297
N + T+M+ GY +NG EEA+ +F Q G + D+ S++ C L E G Q
Sbjct: 504 NSIIQTSMICGYARNGLPEEAICLFYRCQSEGTMVLDEVAFTSILGVCGTLGFHEVGKQI 563
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H ++L TG + + V N++++ Y KC NI+D+ + FN M D VSW L++G +
Sbjct: 564 HCQALKTGFHAELGVGNSIISMYSKCYNIDDAIKAFNTMPGHDVVSWNGLIAGQLLHRQG 623
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSA--CSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
+E + ++ M G+KPD +T + ++SA + + L+++ R F M + + P +HY
Sbjct: 624 DEALAIWSSMEKAGIKPDAITFVLIVSAYKFTSSNLLDECRSLFLSMKMIHDLEPTSEHY 683
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
++ +L G LEEA+ INKMPF P+ W LL CR+H N IGK A+ ++ ++P
Sbjct: 684 ASLVGVLGYWGLLEEAEELINKMPFDPEVSVWRALLDGCRLHANTSIGKRVAKHIIGMEP 743
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSP 535
+P++YVL+S++YA+ G+W +R MR++G+RK P SW+ K ++H F A D S P
Sbjct: 744 RDPSTYVLVSNLYAASGRWHCSEMVRENMRDRGLRKHPCRSWVIIKKQLHTFYARDKSHP 803
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
S+ IY+ L+ L K +K GY PDMS VL +VE +K L +HS KLA +GLL PG
Sbjct: 804 QSNDIYSGLDILILKCLKAGYEPDMSFVLQEVEEQQKKDFLFYHSAKLAATYGLLKTRPG 863
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
PIRVVKN+ +C DCH KY + +TQREI+ RDA FH F NG+CSC +W
Sbjct: 864 EPIRVVKNILLCRDCHTFLKYATVVTQREIIFRDASGFHCFSNGQCSCKGYW 915
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 138/526 (26%), Positives = 241/526 (45%), Gaps = 74/526 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VS++ LIS S +N + L + + + +S + I+++ R ++L
Sbjct: 163 MSTPDVVSYSALIS---SFSKLNRETEAIQLFFRMRISGIEPNEYSFVAILTACIRSLEL 219
Query: 61 --GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G Q+H +K G+ VFV + L+ +Y K G + A FDE+P+++I +NTMI+ L
Sbjct: 220 EMGLQVHALAIKLGYSQLVFVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISSL 279
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
++ E++ LFR + QN +G DQFT
Sbjct: 280 VKGLSYEKALELFRVLN---------------QN---------------KGFKADQFTLS 309
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
++LTAC A +G++IHA+ IR ++N+ V +A++ Y +C S+ + ++F M +
Sbjct: 310 TLLTACARCHARIQGREIHAYAIRIGLENNLSVSNAIIGFYTRCGSLNHVAALFERMPVR 369
Query: 239 NVVSWT-------------------------------AMLVGYGQNGCSEEAVKIFCNMQ 267
++++WT A+L G+ +N +A+ +F M
Sbjct: 370 DIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGFCKNNEGLKALNLFVRMV 429
Query: 268 RNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIE 327
+ G E DFTL VI++C L LE Q HG + G S + AL+ KCG ++
Sbjct: 430 QEGAELTDFTLTGVINACGLLLKLEISRQIHGFIIKFGFRSNACIEAALIDMCSKCGRMD 489
Query: 328 DSHRLFNEMNVR--DEVSWTALVSGYAKFGKANETIDLFEKMLSHG-LKPDEVTLIGVLS 384
D+ R+F ++ + + T+++ GYA+ G E I LF + S G + DEV +L
Sbjct: 490 DADRMFQSLSTDGGNSIIQTSMICGYARNGLPEEAICLFYRCQSEGTMVLDEVAFTSILG 549
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDA 444
C G E G+ + G +I + S+ +++A N MP D
Sbjct: 550 VCGTLGFHEVGKQ-IHCQALKTGFHAELGVGNSIISMYSKCYNIDDAIKAFNTMP-GHDV 607
Query: 445 IGWATLLSSCRIH--GNVEIGKWAAESLLELDPYNPASYVLLSSIY 488
+ W L++ +H G+ + W++ + P + ++VL+ S Y
Sbjct: 608 VSWNGLIAGQLLHRQGDEALAIWSSMEKAGIKP-DAITFVLIVSAY 652
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 202/413 (48%), Gaps = 66/413 (15%)
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
+DL R +H ILK G +++ G+ ++ Y KLGL
Sbjct: 120 IDLARALHASILKLGEDTHL--GNAVIAAYIKLGL------------------------- 152
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
V ++ +F GM D +S++ +I+ + E EAI LF MR+ G+ ++++F
Sbjct: 153 ------VVDAYEVFMGMSTPDVVSYSALISSFSKLNRETEAIQLFFRMRISGIEPNEYSF 206
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
++LTAC L LE G Q+HA I+ + VFV +AL+ +Y KC + +A +F M
Sbjct: 207 VAILTACIRSLELEMGLQVHALAIKLGYSQLVFVANALIGLYGKCGCLDHAIHLFDEMPQ 266
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN-GIEPDDFTLGSVISSCANLASLEEGTQ 296
+++ SW M+ + E+A+++F + +N G + D FTL +++++CA + +G +
Sbjct: 267 RDIASWNTMISSLVKGLSYEKALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQGRE 326
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H ++ GL + ++VSNA++ FY +CG++ LF M VRD ++WT +++ Y +FG
Sbjct: 327 IHAYAIRIGLENNLSVSNAIIGFYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFGL 386
Query: 357 ANETIDLFEK-------------------------------MLSHGLKPDEVTLIGVLSA 385
+ +D+F K M+ G + + TL GV++A
Sbjct: 387 VDLAVDMFNKMPEKNSVSYNALLTGFCKNNEGLKALNLFVRMVQEGAELTDFTLTGVINA 446
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
C +E R ++K +G R +ID+ S+ GR+++A +
Sbjct: 447 CGLLLKLEISRQIHGFIIK-FGFRSNACIEAALIDMCSKCGRMDDADRMFQSL 498
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 152/295 (51%), Gaps = 12/295 (4%)
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
++ + +HA I++ ++ +G+A++ Y K + A VF M+ +VVS++A++
Sbjct: 120 IDLARALHASILK--LGEDTHLGNAVIAAYIKLGLVVDAYEVFMGMSTPDVVSYSALISS 177
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
+ + EA+++F M+ +GIEP++++ +++++C LE G Q H ++ G
Sbjct: 178 FSKLNRETEAIQLFFRMRISGIEPNEYSFVAILTACIRSLELEMGLQVHALAIKLGYSQL 237
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM-L 368
+ V+NAL+ YGKCG ++ + LF+EM RD SW ++S K + ++LF +
Sbjct: 238 VFVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISSLVKGLSYEKALELFRVLNQ 297
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGR--HYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
+ G K D+ TL +L+AC+R +GR H + I + G+ +I +R G
Sbjct: 298 NKGFKADQFTLSTLLTACARCHARIQGREIHAYAIRI---GLENNLSVSNAIIGFYTRCG 354
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
L + +MP D I W ++++ G V++ A + ++ N SY
Sbjct: 355 SLNHVAALFERMPV-RDIITWTEMITAYMEFGLVDL---AVDMFNKMPEKNSVSY 405
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 241/649 (37%), Positives = 375/649 (57%), Gaps = 34/649 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP +WN +IS ++ +A ++ M +G R+TF ++L + +
Sbjct: 71 MPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEG-ERCDRVTFLSILDACVNPENLQH 129
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ + I + F +FVG+ L+ MYA+ PE
Sbjct: 130 GKHVRESISETSFELDLFVGTALITMYARC-----------RSPEN-------------- 164
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ ++F MK K+ I+W+ +IT +G EA+ FR M+ EG+ ++ TF S+
Sbjct: 165 ------AAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISL 218
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS--IKYAESVFRTMAWK 238
L LEE +IH I + D + +ALV++Y +C++ + AE + + M +
Sbjct: 219 LNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQ 278
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+ +W ++ GY +G S EA++ + +Q I D T SV+++C + SL EG H
Sbjct: 279 QITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIH 338
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
++ GL S + V NAL Y KCG++E++ R+F+ M +R VSW ++ YA+ G++
Sbjct: 339 SNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESE 398
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
E + L KM G+K + +T + VLS+CS AGL+ +G YF + + GI +HY C+
Sbjct: 399 EVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCL 458
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
+D+L RAG+L+EA+ +I+KMP P+ + WA+LL +CR+H +++ GK AA LLELDP N
Sbjct: 459 VDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNS 518
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
++ V+LS+IY+ +G W + ++LRR M + V+K PG S I+ K++VH F D S P +
Sbjct: 519 SASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAA 578
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
+IY ++E+L M + GYVPD VLHDV+ +K +L +HSEKLAIAFGL+ P +
Sbjct: 579 EIYDKVEELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPEKSSL 638
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ KNLRVC DCH ATK+ISKIT REI+VRD RFH F++G CSC D+W
Sbjct: 639 HIFKNLRVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 687
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/423 (28%), Positives = 209/423 (49%), Gaps = 39/423 (9%)
Query: 43 ITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDE 102
ITF +L + G+ IH + + VFV + LV+ Y K G + DA++ FD
Sbjct: 11 ITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDG 70
Query: 103 LPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLER--EAID 160
+P +++ +N+MI+ SIS ER EA
Sbjct: 71 MPCRSVGTWNSMISAY--------------------SIS-------------ERSGEAFF 97
Query: 161 LFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYC 220
+F+ M+ EG D+ TF S+L AC L+ GK + I + ++FVG+AL+ MY
Sbjct: 98 IFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYA 157
Query: 221 KCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGS 280
+C+S + A VF M KN+++W+A++ + +G EA++ F MQ+ GI P+ T S
Sbjct: 158 RCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFIS 217
Query: 281 VISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKC--GNIEDSHRLFNEMNV 338
+++ + LEE ++ H GL T+SNALV YG+C G ++ + + EM+
Sbjct: 218 LLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDE 277
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
+ +W L++GY G++ E ++ ++++ + D+VT I VL+AC+ + + +G+
Sbjct: 278 QQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMI 337
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
V E G+ + ++ S+ G +E A+ + MP A+ W +L + HG
Sbjct: 338 HSNAV-ECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPI-RSAVSWNGMLQAYAQHG 395
Query: 459 NVE 461
E
Sbjct: 396 ESE 398
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 196/416 (47%), Gaps = 30/416 (7%)
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M LEG+ + TF +VL + AL +GK IH+ + ++H +VFV +ALV+ Y KC S
Sbjct: 1 MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A VF M ++V +W +M+ Y + S EA IF MQ G D T S++ +
Sbjct: 61 LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
C N +L+ G T + V AL+T Y +C + E++ ++F M ++ ++W
Sbjct: 121 CVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITW 180
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA-CSRAGLVEKGRHYFEIMV 403
+A+++ +A G E + F M G+ P+ VT I +L+ + +GL E R +++
Sbjct: 181 SAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSR--IHLLI 238
Query: 404 KEYGIRPIHDHYTCMIDILSR--AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
E+G+ ++++ R G L+ A+ + +M W L++ +HG
Sbjct: 239 TEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMD-EQQITAWNVLINGYTLHGRSR 297
Query: 462 IGKWAAESL-LELDPYNPASYVLL-----SSIYASKGKWDHVSQLRRTMREKGVRKDP-- 513
+ L LE P + +++ + SS ++GK H + + + + K+
Sbjct: 298 EALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALT 357
Query: 514 ----GCSWIKYKSRVH----IFSADDWSSPYSDQIYA------ELEKLNRKMIKEG 555
C ++ R+ I SA W+ Q YA E+ KL RKM +EG
Sbjct: 358 NMYSKCGSMENARRIFDSMPIRSAVSWNGML--QAYAQHGESEEVLKLIRKMEQEG 411
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 252/670 (37%), Positives = 383/670 (57%), Gaps = 59/670 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSWN +IS + + +A+ LM+ DG+ +T +++L S + +GR+I
Sbjct: 498 DLVSWNTVISSLSQNDRFEEALMYVYLMIVDGV-RPDGVTLASVLPACSQLERLRIGREI 556
Query: 65 HGHILKFG-FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
H + L+ G FVG+ LVDMY + P+K ++++ G++RR +
Sbjct: 557 HCYALRNGDLIENSFVGTALVDMYCNC-----------KQPKKGRLVFD----GVVRRTV 601
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG-LAMDQFTFGSVLT 182
W ++ G +N + +A+ LF EM E + TF SVL
Sbjct: 602 A----------------VWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLP 645
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
AC + + IH +I++ + +V +AL+DMY + ++ ++++F M +++VS
Sbjct: 646 ACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVS 705
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIE------------------PDDFTLGSVISS 284
W M+ G G ++A+ + MQR E P+ TL +V+
Sbjct: 706 WNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPG 765
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
CA LA+L +G + H ++ L + V +ALV Y KCG + + R+F++M +R+ ++W
Sbjct: 766 CAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITW 825
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHG------LKPDEVTLIGVLSACSRAGLVEKGRHY 398
L+ Y GK E ++LF M + G ++P+EVT I + +ACS +G+V++G H
Sbjct: 826 NVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHL 885
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI-GWATLLSSCRIH 457
F M +G+ P DHY C++D+L R+GR++EA IN MP + + W++LL +CRIH
Sbjct: 886 FHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIH 945
Query: 458 GNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSW 517
+VE G+ AA+ L L+P + YVL+S+IY+S G WD +R+ M+E GVRK+PGCSW
Sbjct: 946 QSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSW 1005
Query: 518 IKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLN 577
I++ VH F + D S P S +++ LE L+++M KEGYVPD+S VLH+V+ EK ML
Sbjct: 1006 IEHGDEVHKFLSGDASHPQSKELHEYLETLSQRMRKEGYVPDISCVLHNVDDEEKETMLC 1065
Query: 578 HHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFK 637
HSE+LAIAFGLL PPG IRV KNLRVC+DCH ATK ISKI REI++RD RFH F
Sbjct: 1066 GHSERLAIAFGLLNTPPGTTIRVAKNLRVCNDCHVATKIISKIVDREIILRDVRRFHHFA 1125
Query: 638 NGECSCGDFW 647
NG CSCGD+W
Sbjct: 1126 NGTCSCGDYW 1135
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 147/532 (27%), Positives = 233/532 (43%), Gaps = 61/532 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VSWN +I+ ++ ++ LML + + S S S R V L
Sbjct: 393 IPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRL 452
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H + L+ G + + LV MYA+LG
Sbjct: 453 GKQVHAYTLRNG-DLRTYTNNALVTMYARLGR---------------------------- 483
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
V +++ LF KD +SW T+I+ L QN EA+ M ++G+ D T SV
Sbjct: 484 ---VNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASV 540
Query: 181 LTACGGLLALEEGKQIHAFIIRN-DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
L AC L L G++IH + +RN D +N FVG+ALVDMYC CK K VF + +
Sbjct: 541 LPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRT 600
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
V W A+L GY +N ++A+++F M + P+ T SV+ +C + H
Sbjct: 601 VAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIH 660
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G + G V NAL+ Y + G +E S +F MN RD VSW +++G G+ +
Sbjct: 661 GYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYD 720
Query: 359 ETIDLFEKMLSH------------------GLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
+ ++L +M KP+ VTL+ VL C+ + KG+
Sbjct: 721 DALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHA 780
Query: 401 IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
VK+ + + ++D+ ++ G L A ++MP + I W L+ + +HG
Sbjct: 781 YAVKQKLAMDVAVG-SALVDMYAKCGCLNLASRVFDQMPI-RNVITWNVLIMAYGMHGKG 838
Query: 461 E-------IGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
E I S E+ N +Y+ + + + G D L TM+
Sbjct: 839 EEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMK 890
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 134/463 (28%), Positives = 214/463 (46%), Gaps = 48/463 (10%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
W L+ S DA+ Y ML F +L +++ + LG+QIH H
Sbjct: 297 QWIDLLRSQTHSSSFRDAISTYAAMLAAPA-PPDNFAFPAVLKAAAAVHDLCLGKQIHAH 355
Query: 68 ILKFGFG--SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
+ KFG S V V + LV+MY K G + A++ FD++P
Sbjct: 356 VFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIP--------------------- 394
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
D+D +SW +MI L + ++ LFR M E + FT SV AC
Sbjct: 395 ----------DRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACS 444
Query: 186 GLLA-LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+ + GKQ+HA+ +RN + +ALV MY + + A+++F K++VSW
Sbjct: 445 HVRGGVRLGKQVHAYTLRNGDL-RTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWN 503
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++ QN EEA+ M +G+ PD TL SV+ +C+ L L G + H +L
Sbjct: 504 TVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRN 563
Query: 305 G-LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
G LI V ALV Y C + +F+ + R W AL++GYA+ ++ + L
Sbjct: 564 GDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRL 623
Query: 364 FEKMLSHG-LKPDEVTLIGVLSACSRAGLV--EKGRHYFEIMVKEYGIRPIHDHY--TCM 418
F +M+S P+ T VL AC R + ++G H + I+ + +G D Y +
Sbjct: 624 FVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGY-IVKRGFG----KDKYVQNAL 678
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+D+ SR GR+E +K+ +M D + W T+++ C + G +
Sbjct: 679 MDMYSRMGRVEISKTIFGRMN-KRDIVSWNTMITGCIVCGRYD 720
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 241/570 (42%), Positives = 350/570 (61%), Gaps = 14/570 (2%)
Query: 81 SPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSI 140
S L M K G + +A+ F ++PE + V YNTM++ +R +E ++ F M KD+
Sbjct: 11 SVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAFFEDMPIKDTP 70
Query: 141 SWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA---CGGLLALEEGKQIH 197
SW TMITG QN +A DLF M + + T+ ++++ CG L + + +
Sbjct: 71 SWNTMITGFAQNQQMDKARDLFLIMPTKNVV----TWNAMISGYVECGDLDSALKLFEKA 126
Query: 198 AFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSE 257
F +V +A++ Y K I AE +F M KN+V+W AM+ GY +N +E
Sbjct: 127 PF-------KSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAE 179
Query: 258 EAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALV 317
+ VK+F M GI+P+ TL S + C+ L++L+ G Q H + L T +L+
Sbjct: 180 DGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLI 239
Query: 318 TFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEV 377
+ Y KCG +ED +LF ++ RD V+W A++SGYA+ G+ + + LF++M+ G+KPD +
Sbjct: 240 SMYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWI 299
Query: 378 TLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINK 437
T + VL AC+ AG + G YF M K+YG+ DHYTCM+D+L RAG+L EA I K
Sbjct: 300 TFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEK 359
Query: 438 MPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHV 497
MPF P A + TLL +CRIH N E+ ++A++ LL LDP + YV L+++YA+ +WDHV
Sbjct: 360 MPFKPHAAVFGTLLGACRIHKNTEMAEFASQKLLNLDPASATGYVQLANVYAATKRWDHV 419
Query: 498 SQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYV 557
+++R++M+ V K PG SWI+ KS H F + D P I+ +L++L +KM GYV
Sbjct: 420 ARVRKSMKSCKVVKTPGYSWIEVKSMAHQFRSGDKFHPELASIHGKLKELEKKMKLAGYV 479
Query: 558 PDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYI 617
PD+ LHDV +K ++L HSEKLAIA+GL+ +PPG PIRV KNLRVC DCH A KYI
Sbjct: 480 PDLEFALHDVGEEQKEQLLLWHSEKLAIAYGLIKLPPGTPIRVFKNLRVCGDCHRAIKYI 539
Query: 618 SKITQREILVRDAVRFHLFKNGECSCGDFW 647
S+I +REI+VRD RFH FK+G CSC D+W
Sbjct: 540 SQIERREIIVRDTTRFHHFKDGHCSCADYW 569
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 194/402 (48%), Gaps = 17/402 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLM-LKDGLGNLSRITFSTMLIMSSSRRCVD 59
+P D VS+N ++S + + ++ A + M +KD +++TM+ + + +D
Sbjct: 33 IPEPDAVSYNTMLSCYVRNSNMERAQAFFEDMPIKD------TPSWNTMITGFAQNQQMD 86
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
R + V + ++ Y + G + A + F++ P K++V + MITG +
Sbjct: 87 KARDL----FLIMPTKNVVTWNAMISGYVECGDLDSALKLFEKAPFKSVVAWTAMITGYM 142
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ G + + RLF M +K+ ++W MI G ++N + + LFR M G+ + T S
Sbjct: 143 KLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSS 202
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
L C L AL+ G+Q+H + ++ D+ G++L+ MYCKC ++ +F + ++
Sbjct: 203 ALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRD 262
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FH 298
VV+W AM+ GY Q+G ++A+ +F M G++PD T +V+ +C + + G + FH
Sbjct: 263 VVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFH 322
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
+ GL++ +V G+ G + ++ L +M + + + G + K
Sbjct: 323 SMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKPHAAVFGTLLGACRIHKNT 382
Query: 359 ETIDLFEKMLSHGLKPDEVT----LIGVLSACSRAGLVEKGR 396
E + + L + L P T L V +A R V + R
Sbjct: 383 EMAEFASQKLLN-LDPASATGYVQLANVYAATKRWDHVARVR 423
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/650 (37%), Positives = 372/650 (57%), Gaps = 72/650 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VS+N +ISG A +G A+ V+ M K+GL ++ + ++++ + +DL
Sbjct: 115 MPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGL---KPTEYTHVSVLNACTQLLDL 171
Query: 61 --GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G+QIHG I+ G VFV + L D+YA+ G I
Sbjct: 172 RRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEI------------------------- 206
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+++RRLF M ++ ++W MI+G ++N + IDLF EM++ L DQ T
Sbjct: 207 ------DQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTAS 260
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
SVL A Y + I A VF + K
Sbjct: 261 SVLGA-----------------------------------YIQAGYIDEARKVFGEIREK 285
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+ V WT M+VG QNG E+A+ +F M PD +T+ SV+SSCA LASL G H
Sbjct: 286 DEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVH 345
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G++ + G+ + VS+ALV Y KCG D+ +F+ M R+ VSW +++ GYA G+
Sbjct: 346 GKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDL 405
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
E + L+E ML LKPD VT +GVLSAC AGLVE+G+ YF M ++G+ P DHY CM
Sbjct: 406 EALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACM 465
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
+++ R+G +++A I+ M P+++ W T+LS C + G+++ G+ AA L+EL+P+N
Sbjct: 466 VNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNA 525
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
Y++LS++YA++G+W V+ +R M+ K V+K SWI+ + VH F ADD + P +
Sbjct: 526 VPYIMLSNMYAARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAK 585
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGL-P 597
I+ +L +L RK+ + G+ P+ + VLHD EK++ +N+HSEKLA+A+GL+ P G+ P
Sbjct: 586 IIHVQLNRLIRKLQEAGFSPNTNLVLHDFGEDEKLESINYHSEKLALAYGLIKKPHGVTP 645
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
IR++KN+R C+DCH K++S IT+R +++RD+ RFH F G+CSC D+W
Sbjct: 646 IRIIKNIRTCADCHIFMKFVSNITRRPVILRDSNRFHHFVEGKCSCKDYW 695
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 139/484 (28%), Positives = 231/484 (47%), Gaps = 75/484 (15%)
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
L +H H+ K + F+ + L+++YAK G I A++ FDE+ +++ +N M++
Sbjct: 44 LKSHMHLHLFK---PNDTFIHNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYA 100
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ GLVE+ R +F M +DS+S+ T+I+G NG A+ +F M+ EGL ++T S
Sbjct: 101 KSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVS 160
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL AC LL L GKQIH II + NVFV +AL D+Y +C I A +F M +N
Sbjct: 161 VLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRN 220
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VV+W M+ GY +N E+ + +F MQ + ++PD T SV+ +
Sbjct: 221 VVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGA--------------- 265
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
Y + G I+++ ++F E+ +DEV WT ++ G A+ GK +
Sbjct: 266 --------------------YIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEED 305
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRA-----GLVEKGRHYF-----EIMVKEYGIR 409
+ LF +ML +PD T+ V+S+C++ G V G+ + +++V +
Sbjct: 306 ALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVD 365
Query: 410 ------PIHDHYTCMIDILSR--------------AGRLEEAKSFINKM---PFPPDAIG 446
D +T + +R G+ EA S M PD++
Sbjct: 366 MYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVT 425
Query: 447 WATLLSSCRIHGNVEIGKWAAESLLE---LDPYNPASYVLLSSIYASKGKWDHVSQLRRT 503
+ +LS+C G VE GK S+ + L+P P Y + +++ G D L +
Sbjct: 426 FVGVLSACVHAGLVEEGKEYFCSMSDQHGLEP-TPDHYACMVNLFGRSGHMDKAVDLISS 484
Query: 504 MREK 507
M ++
Sbjct: 485 MSQE 488
>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
Length = 706
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/646 (36%), Positives = 373/646 (57%), Gaps = 35/646 (5%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P + SW +LI+ A HG +A+ ++ MLK G+ S + + S+ + G
Sbjct: 96 PAKNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAG 155
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
R +H + ++GF V + LV MY+K G +
Sbjct: 156 RALHALLRRYGFQDAVVATTSLVSMYSKCGSL---------------------------- 187
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
EES + F M + +++SW MI ++ EA+ ++M LEG+ T+ +++
Sbjct: 188 ---EESVKTFESMTELNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSVTYITLM 244
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+A L+ + IH I+R +V + +++MY KC ++ AE++F++M+ +V+
Sbjct: 245 SAYDQPSQLKSARYIHDCILRTGFDQDVV--NVILNMYGKCGCLQDAEAMFKSMSQPDVI 302
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
+W M+ Y Q+G + EA++ + MQ G+ PDD+T SVI +CA L +E G Q H R
Sbjct: 303 AWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQVH-RR 361
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
L ++N+LV YGKCG ++ + +F++ + V+W A++ YA+ +
Sbjct: 362 LGDRAFQVTELANSLVNMYGKCGILDVARSIFDK-TAKGSVTWNAMIGAYAQHSHEQQAF 420
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
+LF M G +P +T + VLSAC+ AGL E+ YF M +++G+RP HY CM++
Sbjct: 421 ELFLLMRLDGEEPSYITFMSVLSACANAGLPEEAHSYFVCMQQDHGVRPGGGHYGCMVES 480
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
L +AGRL +A++ I MPF PD + W + L++CR HG+++ GK+AA+ + +DP Y
Sbjct: 481 LGKAGRLSDAEALIQGMPFEPDVLTWTSFLANCRSHGDMKRGKFAAKGAIRIDPEASTGY 540
Query: 482 VLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIY 541
V L+ I+A G + S++R+ M ++G+RK+ G S IK + V+ F+A D S+P S +I+
Sbjct: 541 VALARIHADAGDFQEASRIRKLMLDRGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKEIF 600
Query: 542 AELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVV 601
EL++L+++M + GY PDM+ V HDVE +K +L HSE+LAIAFG++ G P+R++
Sbjct: 601 DELKRLDKEMKRAGYDPDMTHVAHDVEAGQKEPLLFAHSERLAIAFGIISTSQGTPLRIM 660
Query: 602 KNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCH TK SKIT+REI+VRD+ RFH FKNG CSC DFW
Sbjct: 661 KNLRVCGDCHAMTKLTSKITRREIIVRDSNRFHHFKNGSCSCKDFW 706
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 204/433 (47%), Gaps = 44/433 (10%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR+IH I + G GS V+V + LV MY K G + +A+ F+ P KN+
Sbjct: 53 GRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNV------------ 100
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SWT +IT Q+G +EA+ LF EM +G+ +F +
Sbjct: 101 -------------------FSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAA 141
Query: 181 LTAC-GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+ AC G L G+ +HA + R +D V ++LV MY KC S++ + F +M N
Sbjct: 142 INACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELN 201
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VSW AM+ + ++ EA++ M GI T +++S+ + L+ H
Sbjct: 202 AVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHD 261
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
L TG V N ++ YGKCG ++D+ +F M+ D ++W +++ Y++ G +E
Sbjct: 262 CILRTGFDQ--DVVNVILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSE 319
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP--IHDHYTC 417
+ +E M G+ PD+ T + V+ AC+ G +E G+ + G R + +
Sbjct: 320 ALRFYELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQVH----RRLGDRAFQVTELANS 375
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
++++ + G L+ A+S +K ++ W ++ + H + E + L+ LD
Sbjct: 376 LVNMYGKCGILDVARSIFDKT--AKGSVTWNAMIGAYAQHSH-EQQAFELFLLMRLDGEE 432
Query: 478 PASYVLLSSIYAS 490
P SY+ S+ ++
Sbjct: 433 P-SYITFMSVLSA 444
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 159/311 (51%), Gaps = 6/311 (1%)
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
V+ +C L AL EG++IH I R +V+V + LV MY KC S++ A VF KN
Sbjct: 40 VIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKN 99
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC-ANLASLEEGTQFH 298
V SWT ++ Q+G S+EA+ +F M + GI+P + + I++C A L G H
Sbjct: 100 VFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALH 159
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G + + +LV+ Y KCG++E+S + F M + VSW A+++ +A+ +
Sbjct: 160 ALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGL 219
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
E + +KM G++ VT I ++SA + ++ R+ + +++ G D +
Sbjct: 220 EALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRT-GFD--QDVVNVI 276
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
+++ + G L++A++ M PD I W T++++ HG+ E L++ + P
Sbjct: 277 LNMYGKCGCLQDAEAMFKSMS-QPDVIAWNTMIAAYSQHGHTSEALRFYE-LMQEEGVVP 334
Query: 479 ASYVLLSSIYA 489
Y +S I A
Sbjct: 335 DDYTYVSVIDA 345
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 132/297 (44%), Gaps = 19/297 (6%)
Query: 281 VISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD 340
VI SCA L +L EG + H GL S + VSN LV YGKCG++E++ +F ++
Sbjct: 40 VIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKN 99
Query: 341 EVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
SWT L++ A+ G++ E + LF +ML G++P V+ ++ACS
Sbjct: 100 VFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALH 159
Query: 401 IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN- 459
+++ YG + T ++ + S+ G LEE+ M +A+ W ++++ H
Sbjct: 160 ALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMT-ELNAVSWNAMIAAFAEHRRG 218
Query: 460 VEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDP------ 513
+E + + LE +Y+ L S Y + + + G +D
Sbjct: 219 LEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFDQDVVNVILN 278
Query: 514 -----GC-----SWIKYKSRVHIFSADDWSSPYSDQIY-AELEKLNRKMIKEGYVPD 559
GC + K S+ + + + + YS + +E + M +EG VPD
Sbjct: 279 MYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPD 335
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/677 (35%), Positives = 381/677 (56%), Gaps = 71/677 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN LIS + HG + ++ M G + +T+ ++L +S +
Sbjct: 238 MPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSP-NFMTYGSVLSACASTSDLKW 296
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +H IL+ + G+ L+DMYAK G +
Sbjct: 297 GAHLHARILRMEHSLDLVFGNGLIDMYAKCGCL--------------------------- 329
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ ++R+F+ +++ D ISW ++ITG++ GL +A+ LF +MR + +D+F ++
Sbjct: 330 ----DLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTI 385
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C G G+ +H + I++ + VG+A++ MY KC A+ VFR M +N
Sbjct: 386 LGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNT 445
Query: 241 VSWTAMLVG-------------------------------YGQNGCSEEAVKIFCNMQRN 269
+SWTAM+ Y QNG SEE +K++ +M+ N
Sbjct: 446 ISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSN 505
Query: 270 GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
G++PD T + I +CA+LA ++ G Q + GL ++V+N++VT Y +CG I+++
Sbjct: 506 GVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEA 565
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
F+ ++ +D +SW A+++ +A+ G + ID FE ML KP+ ++ + VLS CS
Sbjct: 566 KNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHM 625
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
GLV +G+HYF+ M + +GI P ++H++CM+D+L RAG LE+AK I MPF P+A W+
Sbjct: 626 GLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSA 685
Query: 450 LLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
LL SCR+H ++ + + AA+ L+ELD YVLLS++Y+ G+ D+V+ +R+ M+ KG+
Sbjct: 686 LLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDNVADMRKLMKVKGI 745
Query: 510 RKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVEL 569
R GCSWI+ +RVH+F+ D+ S P ++Y +LE++ + + G + S +H
Sbjct: 746 RTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEMMKMIEDTGKYITVESSVH---- 801
Query: 570 SEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRD 629
+ +HSEKLA AFGLL +P +PI V+KNLRVC DCH K +S +T RE+++RD
Sbjct: 802 ----RSKKYHSEKLAFAFGLLNLPSWMPIHVMKNLRVCDDCHLVIKLLSLVTSRELIMRD 857
Query: 630 AVRFHLFKNGECSCGDF 646
RFH FK+G CSC D+
Sbjct: 858 GYRFHHFKDGICSCKDY 874
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 249/483 (51%), Gaps = 36/483 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKD---GLGNLSRITFSTMLIMSSSRRCVDLG 61
D VSW +ISG++ +G + + + ++LM++D G N +F++++ S L
Sbjct: 106 DSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLA 165
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
Q+H + K GFG + + +V MY K G + A+ F ++ ++ +N+MI G +
Sbjct: 166 IQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQM 225
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
++ ++F M ++D +SW T+I+ Q+G + + +F EM +G + + T+GSVL
Sbjct: 226 YGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVL 285
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+AC L+ G +HA I+R +H ++ G+ L+DMY KC + A+ VF+++ + +
Sbjct: 286 SACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHI 345
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW +++ G G E+A+ +F M+R+ + D+F L +++ C+ G HG +
Sbjct: 346 SWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYT 405
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK---FGKA- 357
+ +G+ S V NA++T Y KCG+ + + +F M +R+ +SWTA+++ +++ GKA
Sbjct: 406 IKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKAR 465
Query: 358 ---------------------------NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
E + L+ M S+G++PD +T + AC+
Sbjct: 466 GYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLA 525
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATL 450
+V+ G K +G+ ++ + SR G ++EAK+ + + D I W +
Sbjct: 526 IVKLGMQVVTHATK-FGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSID-DKDLISWNAM 583
Query: 451 LSS 453
L++
Sbjct: 584 LAA 586
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 137/513 (26%), Positives = 233/513 (45%), Gaps = 52/513 (10%)
Query: 52 SSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMY 111
S + + + R++H ++ G S +F+ + L+ MY+ GL +DA + F E +NI +
Sbjct: 18 SFTHKSPHIARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTW 77
Query: 112 NTMITGLLRRGLVEESRRLFRGM--KDKDSISWTTMITGLMQNGLEREAIDLF----REM 165
NTMI L+ + ++ +LF M + KDS+SWTTMI+G QNG + + F R+
Sbjct: 78 NTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDT 137
Query: 166 RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI 225
G D F+F SV+ ACG L Q+HA + + + +++V MY KC +
Sbjct: 138 NDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDV 197
Query: 226 KYAESVFRTMAWKNVVSWTAMLVGY-------------------------------GQNG 254
AE+VF + ++ W +M+ GY Q+G
Sbjct: 198 DLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHG 257
Query: 255 CSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSN 314
+ + +F M G P+ T GSV+S+CA+ + L+ G H R L + N
Sbjct: 258 FGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGN 317
Query: 315 ALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKP 374
L+ Y KCG ++ + R+F + D +SW +L++G FG + + LF +M +
Sbjct: 318 GLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVL 377
Query: 375 DEVTLIGVLSACSRAGLVEKGR--HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAK 432
DE L +L CS G H + I P+ + +I + ++ G ++A
Sbjct: 378 DEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGN---AIITMYAKCGDTDKAD 434
Query: 433 SFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP-YNPASYVLLSSIYASK 491
MP + I W ++++ G +IGK A ++ P N ++ + S Y
Sbjct: 435 LVFRLMPL-RNTISWTAMITAFSRSG--DIGK--ARGYFDMMPERNIVTWNSMLSTYVQN 489
Query: 492 GKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRV 524
G + +L +MR GV+ D WI + + +
Sbjct: 490 GFSEEGLKLYVSMRSNGVQPD----WITFTTSI 518
>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
Length = 785
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 241/652 (36%), Positives = 384/652 (58%), Gaps = 49/652 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRR--CVDLGR 62
D VSWN L+SG+ G+ + V+V+ +M + G+G L+ +++ S R +D+
Sbjct: 174 DDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMG-LNSFALGSVIKCCSGRGDGTMDIAE 232
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
+HG ++K G S VF+ S ++DMYAK +G
Sbjct: 233 AVHGCVIKAGLDSDVFLVSAMIDMYAK-------------------------------KG 261
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNG------LEREAIDLFREMRLEGLAMDQFT 176
+ E+ LFR +++ + + + TMI G + + EA+ L+ E++ G+ +FT
Sbjct: 262 ALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFT 321
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
F SVL AC LE GKQIH +I+ +++ F+GSAL+D+Y ++ FR+
Sbjct: 322 FSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSP 381
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
++V+WTAM+ G QN E+A+ +F G++PD FT+ SV+++CA+LA G Q
Sbjct: 382 KHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQ 441
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
+ +G F + N+ V Y + G+++ + R F EM D VSW+A++S +A+ G
Sbjct: 442 IQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGC 501
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
A + + F++M+ + P+E+T +GVL+ACS GLV++G Y+E M K+YG+ P H T
Sbjct: 502 ARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCT 561
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY 476
C++D+L RAGRL +A++FI+ F D + W +LL+SCRIH ++E G+ A ++EL+P
Sbjct: 562 CVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPT 621
Query: 477 NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPY 536
+ ASYV+L ++Y G+ S+ R M+++GV+K+PG SWI+ K VH F A D S P
Sbjct: 622 SSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPE 681
Query: 537 SDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIK-MLNHHSEKLAIAFGLLFIPPG 595
S IY +LE++ ++ K D E+S++ + ++N HSEKLA+A G++ +P
Sbjct: 682 SSAIYTKLEEMLSRIEKLATT--------DTEISKREQNLMNCHSEKLAVALGMIHLPQS 733
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
PIRV+KNLRVC DCH+ K ISK REI++RD +RFH F++G CSC D+W
Sbjct: 734 APIRVMKNLRVCRDCHSTMKLISKSENREIILRDPIRFHHFRDGSCSCADYW 785
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 181/359 (50%), Gaps = 10/359 (2%)
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
P ++ + NT++ R G +RRL M ++++S+ +I + GL +++
Sbjct: 39 PAASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLA 98
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
R G+ +D+F++ + L AC L G+ +HA I + VFV ++LV MY KC
Sbjct: 99 RARRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCG 158
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
+ A VF ++ VSW +++ GY + G EE V++F M+R G+ + F LGSVI
Sbjct: 159 EMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIK 218
Query: 284 SCANL--ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE 341
C+ +++ HG + GL S + + +A++ Y K G + ++ LF + +
Sbjct: 219 CCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNV 278
Query: 342 VSWTALVSGYAK----FGK--ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG 395
V + +++G+ + GK A+E + L+ ++ S G++P E T VL AC+ AG +E G
Sbjct: 279 VMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFG 338
Query: 396 RHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
+ ++K Y + + +ID+ +G +E+ P D + W ++S C
Sbjct: 339 KQIHGQVIK-YTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSP-KHDIVTWTAMVSGC 395
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 134/273 (49%), Gaps = 15/273 (5%)
Query: 208 NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQ 267
++F+ + L+ YC+ A + M +N VS+ ++ Y + G + +++ +
Sbjct: 42 SLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARAR 101
Query: 268 RNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIE 327
R G++ D F+ + +++C+ L G H +++ GL S + VSN+LV+ Y KCG +
Sbjct: 102 RAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMG 161
Query: 328 DSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS 387
++ R+F+ RD+VSW +LVSGY + G E + +F M G+ + L V+ CS
Sbjct: 162 EARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCS 221
Query: 388 RAGLVEKGRHYFEIMVKEYG--IRPIHDH----YTCMIDILSRAGRLEEAKSFINKMPFP 441
+G +I +G I+ D + MID+ ++ G L EA + +
Sbjct: 222 -----GRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQ-E 275
Query: 442 PDAIGWATLLSS-CRIHGNVEIGKWAAESLLEL 473
P+ + + T+++ CR IGK A L L
Sbjct: 276 PNVVMFNTMIAGFCRT--ETVIGKEVASEALTL 306
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 81/189 (42%), Gaps = 34/189 (17%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P HD V+W ++SG + A+ +++ L GL T S+++ +S G
Sbjct: 381 PKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGL-KPDLFTISSVMNACASLAVARAG 439
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
QI K GF + +G+ V MYA+ G + A R F E
Sbjct: 440 EQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQE------------------- 480
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
M+ D +SW+ +I+ Q+G R+A+ F EM + ++ TF VL
Sbjct: 481 ------------MESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVL 528
Query: 182 TAC--GGLL 188
TAC GGL+
Sbjct: 529 TACSHGGLV 537
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M HD VSW+ +IS HA HG DA+ ++ M+ D + ITF +L S VD
Sbjct: 481 MESHDVVSWSAVISCHAQHGCARDALHFFDEMV-DAKVVPNEITFLGVLTACSHGGLVDE 539
Query: 61 GRQIHGHILK-FGFGSYVFVGSPLVDMYAKLGLIYDAK 97
G + + + K +G + + +VD+ + G + DA+
Sbjct: 540 GLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAE 577
>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g46460, mitochondrial; Flags: Precursor
gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 253/650 (38%), Positives = 367/650 (56%), Gaps = 47/650 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN +ISG G +N AVK++ D + S ++++ M
Sbjct: 92 MPVRDVVSWNSMISGCVECGDMNTAVKLF-----DEMPERSVVSWTAM------------ 134
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
V+ + G + A+R F ++P K+ +N+M+ G L+
Sbjct: 135 -----------------------VNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQ 171
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G V+++ +LF+ M K+ ISWTTMI GL QN EA+DLF+ M + F V
Sbjct: 172 FGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCV 231
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+TAC A G Q+H II+ +V ++L+ Y CK I + VF + V
Sbjct: 232 ITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQV 291
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
WTA+L GY N E+A+ IF M RN I P+ T S ++SC+ L +L+ G + HG
Sbjct: 292 AVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGV 351
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ GL + V N+LV Y GN+ D+ +F ++ + VSW +++ G A+ G+
Sbjct: 352 AVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWA 411
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH---DHYTC 417
+F +M+ +PDE+T G+LSACS G +EKGR F M GI I HYTC
Sbjct: 412 FVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYM--SSGINHIDRKIQHYTC 469
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
M+DIL R G+L+EA+ I +M P+ + W LLS+CR+H +V+ G+ AA ++ LD +
Sbjct: 470 MVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKS 529
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
A+YVLLS+IYAS G+W +VS+LR M++ G+ K PG SW+ + + H F + D P+
Sbjct: 530 SAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGD--QPHC 587
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
+IY +LE L K+ + GY PD S LHDVE +K +ML +HSE+LAIAFGL+ G
Sbjct: 588 SRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSA 647
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ V+KNLRVC DCH K IS + REI++RD +RFH FKNG CSCGD+W
Sbjct: 648 VTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 190/377 (50%), Gaps = 19/377 (5%)
Query: 93 IYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQN 152
I +A+ F+++P ++ +Y MITG R + ++ LF M +D +SW +MI+G ++
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVEC 110
Query: 153 GLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGK--QIHAFIIRNDHKDNVF 210
G A+ LF EM + ++ +++ C GK Q + KD
Sbjct: 111 GDMNTAVKLFDEMPERSVV----SWTAMVNGC-----FRSGKVDQAERLFYQMPVKDTA- 160
Query: 211 VGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
+++V Y + + A +F+ M KNV+SWT M+ G QN S EA+ +F NM R
Sbjct: 161 AWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCC 220
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
I+ VI++CAN + G Q HG + G + VS +L+TFY C I DS
Sbjct: 221 IKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSR 280
Query: 331 RLFNEMNVRDEVS-WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
++F+E V ++V+ WTAL+SGY+ K + + +F ML + + P++ T L++CS
Sbjct: 281 KVFDE-KVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSAL 339
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
G ++ G+ + VK G+ ++ + S +G + +A S K+ F + W +
Sbjct: 340 GTLDWGKEMHGVAVK-LGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNS 397
Query: 450 LLSSCRIHGNVEIGKWA 466
++ C HG GKWA
Sbjct: 398 IIVGCAQHGR---GKWA 411
>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 249/663 (37%), Positives = 387/663 (58%), Gaps = 17/663 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + +W +LISG + GS K++ M G ++ T S++ S + L
Sbjct: 350 IPQRNTQTWTILISGFSRAGSSEVVFKLFREMRAKG-ACPNQYTLSSLFKCCSLDINLQL 408
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +H +L+ G + V +G+ ++D+Y K + A+R F+ + E ++V +N MI+ LR
Sbjct: 409 GKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLR 468
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G VE+S +FR + KD +SW T++ GLMQ G ER+A++ M G TF
Sbjct: 469 AGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIA 528
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW--- 237
L L +E G+Q+H +++ + F+ S+LV+MYCKC + A V + +
Sbjct: 529 LILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDFL 588
Query: 238 KN-------------VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
KN +VSW M+ GY NG E+ +K F M R + D T+ ++IS+
Sbjct: 589 KNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISA 648
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
CAN LE G H + G V ++L+ Y K G+++D+ +F + N + V W
Sbjct: 649 CANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFW 708
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
T+++SG A G+ + I LFE+ML+ G+ P+EVT +GVL+AC AGL+E+G YF +M
Sbjct: 709 TSMISGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGVLNACCHAGLLEEGCRYFRMMKD 768
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
Y I P +H T M+D+ RAG L E K+FI + W + LSSCR+H NVE+GK
Sbjct: 769 AYCINPGVEHCTSMVDLYGRAGHLTETKNFIFENGISHLTSVWKSFLSSCRLHKNVEMGK 828
Query: 465 WAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRV 524
W +E LL++ P +P +YVLLS++ AS +WD +++R M ++G++K PG SWI+ K ++
Sbjct: 829 WVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGIKKQPGQSWIQLKDQI 888
Query: 525 HIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLA 584
H F D S P ++IY+ L+ L ++ + GY D+ V+ DVE + +++HHSEKLA
Sbjct: 889 HTFIMGDRSHPQDEEIYSYLDILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLA 948
Query: 585 IAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCG 644
+ FG++ PIR++KNLR+C+DCHN KY S++ REI++RD RFH FK+G CSCG
Sbjct: 949 VVFGIINTANRTPIRIIKNLRICTDCHNFIKYASQLLDREIILRDIHRFHHFKHGGCSCG 1008
Query: 645 DFW 647
D+W
Sbjct: 1009 DYW 1011
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 193/399 (48%), Gaps = 57/399 (14%)
Query: 112 NTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLA 171
N ++T ++ ++ +R+LF + +++ +WT +I+G + G LFREMR +G
Sbjct: 328 NYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGSSEVVFKLFREMRAKGAC 387
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
+Q+T S+ C + L+ GK +HA+++RN +V +G++++D+Y KCK +YAE V
Sbjct: 388 PNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERV 447
Query: 232 -------------------------------FRTMAWKNVVSWTAMLVGYGQNGCSEEAV 260
FR + +K+VVSW ++ G Q G +A+
Sbjct: 448 FELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQAL 507
Query: 261 KIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFY 320
+ M G E T + ++L+ +E G Q HG L G + ++LV Y
Sbjct: 508 EQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMY 567
Query: 321 GKCGNIEDSHRLFNEMNV----------------RDEVSWTALVSGYAKFGKANETIDLF 364
KCG ++++ + ++ + VSW +VSGY GK + + F
Sbjct: 568 CKCGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTF 627
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH--DHY--TCMID 420
M+ + D T+ ++SAC+ AG++E GRH V Y + H D Y + +ID
Sbjct: 628 RLMVRELVVVDIRTVTTIISACANAGILEFGRH-----VHAYNHKIGHRIDAYVGSSLID 682
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+ S++G L++A + I + P+ + W +++S C +HG
Sbjct: 683 MYSKSGSLDDAWT-IFRQTNEPNIVFWTSMISGCALHGQ 720
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 91/172 (52%)
Query: 196 IHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGC 255
+HA ++N + + L+ +Y K ++ +A +F + +N +WT ++ G+ + G
Sbjct: 311 LHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGS 370
Query: 256 SEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNA 315
SE K+F M+ G P+ +TL S+ C+ +L+ G H L G+ + + + N+
Sbjct: 371 SEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNS 430
Query: 316 LVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
++ Y KC E + R+F MN D VSW ++S Y + G +++D+F ++
Sbjct: 431 ILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRL 482
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 31/185 (16%)
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H S+ G + + +N L+T Y K N++ + +LF+E+ R+ +WT L+SG+++ G
Sbjct: 311 LHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGS 370
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVE--KGRH----------------- 397
+ LF +M + G P++ TL + CS ++ KG H
Sbjct: 371 SEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNS 430
Query: 398 ----YFEIMVKEYGIRPIH-------DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIG 446
Y + V EY R + MI RAG +E++ ++P+ D +
Sbjct: 431 ILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPY-KDVVS 489
Query: 447 WATLL 451
W T++
Sbjct: 490 WNTIV 494
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 250/653 (38%), Positives = 383/653 (58%), Gaps = 49/653 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL--GR 62
D VSWN ++ +A HG +++A ++ ML +G I+ S + ++++S C L GR
Sbjct: 290 DVVSWNAMLGAYAQHGHMSEAALLFARMLHEG------ISPSKVTLVNASTGCSSLRFGR 343
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
IHG L+ G + +G+ L+DMY R G
Sbjct: 344 MIHGCALEKGLDRDIVLGNALLDMYT-------------------------------RCG 372
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
EE+R LF+ + +++SW TMI G Q G + A++LF+ M+LEG+A + T+ ++L
Sbjct: 373 SPEEARHLFKRIP-CNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLE 431
Query: 183 ACGG----LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
A A+ EG+++H+ I+ + +G+A+V MY C +I A + F+ A +
Sbjct: 432 AVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAME 491
Query: 239 N---VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
+ VVSW A++ Q+G + A+ F M +G+ P+ T +V+ +CA A+L EG
Sbjct: 492 DRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGE 551
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALVSGYAKF 354
H +G+ S + V+ AL + YG+CG++E + +F ++ V RD V + A+++ Y++
Sbjct: 552 IVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQN 611
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G A E + LF +M G +PDE + + VLSACS GL ++G F M + YGI P DH
Sbjct: 612 GLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDH 671
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
Y C +D+L RAG L +A+ I M P + W TLL +CR + +V+ G+ A + ELD
Sbjct: 672 YACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELD 731
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS 534
P + ++YV+LS+I A GKWD +++R M +G+RK+ G SWI+ KSRVH F A D S
Sbjct: 732 PGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIKSRVHEFVAGDRSH 791
Query: 535 PYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPP 594
P S++IY ELE+L+ ++ + GYVPD VL V+ +EK ++L HSE+LAIA G++
Sbjct: 792 PRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSST 851
Query: 595 GLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+RV+KNLRVC DCHNATK+ISKI +EI+VRD RFH F +G CSCGD+W
Sbjct: 852 D-TVRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/469 (26%), Positives = 215/469 (45%), Gaps = 55/469 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+ D SW +I+ + HG A+ +++ M ++G+ +TF + ++ + R DL
Sbjct: 88 LEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGV-RCDAVTF--LAVLKACARLGDL 144
Query: 61 --GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
GR IH I++ G + + L+ +Y G + A F+++
Sbjct: 145 SQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM--------------- 189
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
++D +SW I Q+G A++LF+ M+LEG+ + T
Sbjct: 190 -----------------ERDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLV 232
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
LT C + + + IH FI+R + + V +AL Y + + A+ VF A
Sbjct: 233 IALTVCA---TIRQAQAIH-FIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAE 288
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
++VVSW AML Y Q+G EA +F M GI P TL + + C +SL G
Sbjct: 289 RDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGC---SSLRFGRMI 345
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
HG +L GL I + NAL+ Y +CG+ E++ LF + + VSW +++G ++ G+
Sbjct: 346 HGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPC-NAVSWNTMIAGSSQKGQM 404
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACS----RAGLVEKGRH-YFEIMVKEYGIRPIH 412
++LF++M G+ P T + +L A + A + +GR + I+ Y P
Sbjct: 405 KRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAI 464
Query: 413 DHYTCMIDILSRAGRLEEAKSFINK--MPFPPDAIGWATLLSSCRIHGN 459
T ++ + + G ++EA + + M D + W ++SS HG+
Sbjct: 465 G--TAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGH 511
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 210/449 (46%), Gaps = 54/449 (12%)
Query: 48 MLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKN 107
+L + R + GR+IH I+ G + G+ L+ +Y K + D
Sbjct: 35 LLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGD------------ 80
Query: 108 IVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL 167
VEE +F ++ +D SWTT+IT ++G + AI +F M+
Sbjct: 81 ----------------VEE---VFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQ 121
Query: 168 EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY 227
EG+ D TF +VL AC L L +G+ IHA+I+ + K + + L+ +Y C +
Sbjct: 122 EGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVAS 181
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN 287
A +F M +++VSW A + Q+G A+++F MQ G+ P TL ++ C
Sbjct: 182 AMLLFEKME-RDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVC-- 238
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
A++ + H +GL + VS AL + Y + G++ + +F+ RD VSW A+
Sbjct: 239 -ATIRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAM 297
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS--RAGLVEKGRHYFEIMVKE 405
+ YA+ G +E LF +ML G+ P +VTL+ + CS R G + G E
Sbjct: 298 LGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCSSLRFGRMIHG------CALE 351
Query: 406 YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKW 465
G+ ++D+ +R G EEA+ ++P +A+ W T+++ G + K
Sbjct: 352 KGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPC--NAVSWNTMIAGSSQKGQM---KR 406
Query: 466 AAE--SLLELDPYNP--ASYVLLSSIYAS 490
A E ++L+ P A+Y+ L AS
Sbjct: 407 AVELFQRMQLEGMAPVRATYLNLLEAVAS 435
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 129/280 (46%), Gaps = 13/280 (4%)
Query: 4 HDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQ 63
HD VSWN +IS + HG A+ + M G+ ++IT +L + + G
Sbjct: 494 HDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAP-NQITCVAVLDACAGAAALTEGEI 552
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITGLLRRG 122
+H H+ G S +FV + L MY + G + A+ F+++ E+++V++N MI + G
Sbjct: 553 VHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNG 612
Query: 123 LVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQFTF 177
L E+ +LF M+ + D S+ ++++ GL E ++FR MR G+A + +
Sbjct: 613 LAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHY 672
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI---KYAESVFRT 234
+ G L + +++ I D K V V L+ K + + + A S+ R
Sbjct: 673 ACAVDVLGRAGWLADAEEL---IRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRE 729
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD 274
+ + ++ + G +EA ++ M+ G+ +
Sbjct: 730 LDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKE 769
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 249/687 (36%), Positives = 377/687 (54%), Gaps = 77/687 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D + + LIS +HG N+A+K+Y+ + + G I + +++++ C
Sbjct: 124 IPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERG------IKPDMPVFLAAAKACAVS 177
Query: 61 G-----RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
G +++H + G S VFVG+ L+ Y K + A+R FD+L +++V
Sbjct: 178 GDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVV------ 231
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
SWT++ + ++ G R+ +D+FREM G+ +
Sbjct: 232 -------------------------SWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPM 266
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
T S+L AC L L+ GK+IH F +R+ N+FV SALV +Y KC S++ A VF M
Sbjct: 267 TVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLM 326
Query: 236 AWKNVVSWTAMLVGYGQN------------------------------GC-----SEEAV 260
++VVSW +L Y +N GC SEEAV
Sbjct: 327 PHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAV 386
Query: 261 KIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFY 320
++F MQ+ G +P++ T+ S++ +C+ +L G + H + +T + AL+ Y
Sbjct: 387 EMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMY 446
Query: 321 GKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLI 380
KCG++ S +F+ M +D V+W ++ A G E + LF+KML ++P+ VT
Sbjct: 447 AKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFT 506
Query: 381 GVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF 440
GVLS CS + LVE+G F M +++ + P +HY+C++DI SRAGRL EA FI MP
Sbjct: 507 GVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPM 566
Query: 441 PPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQL 500
P A W LL++CR++ NVE+ K +A+ L E++P NP +YV L +I + W SQ+
Sbjct: 567 EPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQV 626
Query: 501 RRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDM 560
R M+E+G+ K PGCSW++ ++VH F D S+ SD+IY L++L KM GY PD
Sbjct: 627 RILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDT 686
Query: 561 SSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKI 620
VL D++ EK + L +HSEKLA+AFG+L + IRV KNLR+C DCHNA KY+SK+
Sbjct: 687 DYVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKV 746
Query: 621 TQREILVRDAVRFHLFKNGECSCGDFW 647
I+VRD++RFH FKNG CSC D W
Sbjct: 747 VGVIIVVRDSLRFHHFKNGNCSCKDLW 773
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 186/381 (48%), Gaps = 37/381 (9%)
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
+I L G +R+LF + D + +T+I+ L +GL EAI ++ ++ G+ D
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 163
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
F + AC K++H R +VFVG+AL+ Y KCK ++ A VF
Sbjct: 164 MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 223
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE 293
+ ++VVSWT++ Y + G + + +F M +G++P+ T+ S++ +CA L L+
Sbjct: 224 DLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKS 283
Query: 294 GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK 353
G + HG ++ G++ + V +ALV+ Y KC ++ ++ +F+ M RD VSW +++ Y K
Sbjct: 284 GKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFK 343
Query: 354 -----------------------------------FGKANETIDLFEKMLSHGLKPDEVT 378
G++ E +++F KM G KP+E+T
Sbjct: 344 NKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEIT 403
Query: 379 LIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
+ +L ACS + + G+ + + + + + T ++ + ++ G L +++ + M
Sbjct: 404 ISSILPACSFSENLRMGKEIHCYVFRHWKVGDL-TSTTALLYMYAKCGDLNLSRNVFDMM 462
Query: 439 PFPPDAIGWATLLSSCRIHGN 459
D + W T++ + +HGN
Sbjct: 463 R-RKDVVAWNTMIIANAMHGN 482
>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 641
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 238/561 (42%), Positives = 340/561 (60%), Gaps = 8/561 (1%)
Query: 95 DAKRGFDELPEKNIVMYNTMITGLLRRGL-VEESRRLFRGMKDKDSISWTTMITGLMQNG 153
DA F + +I +NT+I+ L R + +R LF M +D +W+ +++G ++G
Sbjct: 81 DALALFSSIAAPDICSHNTLISALSRSPRHLPSARELFDRMPQRDHFAWSALVSGYTRHG 140
Query: 154 LEREAIDLFREMRLE---GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIR---NDHKD 207
A+ L+R M+ E A ++FT S L A G+++H ++R +
Sbjct: 141 QPEAALALYRRMQEEPGNDGADNEFTASSALAAAAAARCGRAGRELHCHVVRRGIDAAGG 200
Query: 208 NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQ 267
+ + SAL DMY KC + A VF M ++ VSWTAM+ Y G E ++F +M
Sbjct: 201 DAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHML 260
Query: 268 RN-GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
R G+ P++FT V+ +CA A G Q HGR +G +AL+ Y KCG++
Sbjct: 261 RTRGVRPNEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGDM 320
Query: 327 EDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSAC 386
+ R+F M D VSWTA++SGYA+ G+ E + F+ L G+KPD VT +GVLSAC
Sbjct: 321 GSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSAC 380
Query: 387 SRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIG 446
+ AGLV+KG F + ++Y I DHY C+ID+LSR+G+ E A+ I M P+
Sbjct: 381 AHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKFL 440
Query: 447 WATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMRE 506
WA+LL CRIH NV + + AAE+L E++P NPA+YV L++IYAS G +D V +RR M
Sbjct: 441 WASLLGGCRIHKNVGLARRAAEALFEIEPENPATYVTLANIYASVGLFDEVEDVRRIMES 500
Query: 507 KGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHD 566
KG+ K P SWI+ RVH+F D S P +D+IYA L+KL KM++EGYV D+ VLHD
Sbjct: 501 KGITKMPASSWIEVGRRVHVFLVGDKSHPKADEIYALLKKLYVKMVEEGYVADIEFVLHD 560
Query: 567 VELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREIL 626
VE +K + + +HSE+LA+AFG++ P G PI+V KNLR+C DCH A K IS+I QR+I+
Sbjct: 561 VEDEQKEQDIGYHSERLAVAFGIIATPEGSPIKVFKNLRICGDCHAAIKLISQIVQRDII 620
Query: 627 VRDAVRFHLFKNGECSCGDFW 647
VRD+ RFH FK+G CSC D+W
Sbjct: 621 VRDSNRFHHFKDGICSCRDYW 641
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 172/360 (47%), Gaps = 43/360 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLK----DGLGNLSRITFSTMLIMSSSRR 56
MP D +W+ L+SG+ HG A+ +Y M + DG N T S+ L +++ R
Sbjct: 121 MPQRDHFAWSALVSGYTRHGQPEAALALYRRMQEEPGNDGADN--EFTASSALAAAAAAR 178
Query: 57 CVDLGRQIHGHILKFGF---GSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNT 113
C GR++H H+++ G G + S L DMYAK G + DA+R FD +P +
Sbjct: 179 CGRAGRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRMPVR------- 231
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAM 172
D++SWT M+ G E LF M R G+
Sbjct: 232 ------------------------DAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRP 267
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
++FT+ VL AC G+Q+H + ++ D+ F SAL+ MY KC + A VF
Sbjct: 268 NEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVF 327
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
MA ++VSWTA++ GY QNG EEA++ F R+GI+PD T V+S+CA+ ++
Sbjct: 328 EAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVD 387
Query: 293 EGTQ-FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
+G + FH + ++ + G E + ++ M V+ ++ W +L+ G
Sbjct: 388 KGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGG 447
>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 796
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 241/651 (37%), Positives = 383/651 (58%), Gaps = 41/651 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTML--IMSSSRRCVDLGR 62
D VSWN L+SG+ G+ +D ++V+ +M + G+G L+ +++ S +D+
Sbjct: 179 DDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIG-LNSFALGSVIKCCAGSDDPVMDIAA 237
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
+HG ++K GF S VF+ S +V MYAK +G
Sbjct: 238 AVHGCVVKAGFDSDVFLASAMVGMYAK-------------------------------KG 266
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQN------GLEREAIDLFREMRLEGLAMDQFT 176
+ E+ LF+ + D + + + MI GL ++ + REA+ L+ E++ G+ +FT
Sbjct: 267 ALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFT 326
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
F SV+ AC +E GKQIH ++++ + + F+GSAL+D+Y ++ F ++
Sbjct: 327 FSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVP 386
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
++VV+WTAM+ G QN E A+ +F + G++PD FT+ SV+++CA+LA G Q
Sbjct: 387 KQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQ 446
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
+ +G F + N+ + Y + G++ + R F EM D VSW+A++S +A+ G
Sbjct: 447 IQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGC 506
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
A + + F +M+ + P+E+T +GVL+ACS GLV++G Y+E M +EY + P H T
Sbjct: 507 ARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTIKHCT 566
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY 476
C++D+L RAGRL +A++FI F + + W +LL+SCRIH ++E G+ A+ ++EL P
Sbjct: 567 CVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHRDMERGQLVADRIMELQPS 626
Query: 477 NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPY 536
+ ASYV L +IY G+ S++R M+E+GV+K+PG SWI+ +S VH F A D S P
Sbjct: 627 SSASYVNLYNIYLDAGELSLASKIRDVMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPE 686
Query: 537 SDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGL 596
S+ IY++L ++ K I + D SS D + + +N HSEKLA+A GL+ +P
Sbjct: 687 SNAIYSKLAEMLSK-IDKLTATDASSTKSDDTIRNEQSWMNWHSEKLAVALGLIHLPQSA 745
Query: 597 PIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
PIRV+KNLRVC DCH K ISK +REI++RDA+RFH F++G CSC D+W
Sbjct: 746 PIRVMKNLRVCRDCHLTMKLISKSEKREIVLRDAIRFHHFRDGSCSCADYW 796
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 179/360 (49%), Gaps = 13/360 (3%)
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLF- 162
P ++ + NT++ R G +RRL M +++S+ +I + G +++ F
Sbjct: 45 PSPSLFLRNTLLAAYCRLG--GHARRLLDEMPRTNAVSFNLLIDAYSRAGQPEASLETFA 102
Query: 163 REMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC 222
R R G+ D+FT+ + L AC L EGK +HA + VFV ++LV MY +C
Sbjct: 103 RARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYARC 162
Query: 223 KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
+ A VF ++ VSW A++ GY + G ++ +++F M+R+GI + F LGSVI
Sbjct: 163 GDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVI 222
Query: 283 SSCA--NLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD 340
CA + ++ HG + G S + +++A+V Y K G + ++ LF + +
Sbjct: 223 KCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPN 282
Query: 341 EVSWTALVSGYAKFGKA------NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEK 394
V + A+++G + A E + L+ ++ S G++P E T V+ AC+ AG +E
Sbjct: 283 VVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEF 342
Query: 395 GRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
G+ ++K + + + +ID+ +G +E+ +P D + W ++S C
Sbjct: 343 GKQIHGQVLK-HCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVP-KQDVVTWTAMISGC 400
>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Glycine max]
Length = 686
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 251/645 (38%), Positives = 370/645 (57%), Gaps = 37/645 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V+W LISG + A+ ++ M ++ + + TF + S+S G+Q+H
Sbjct: 75 VTWTSLISGCVHNRRFTSALLHFSNMRRECVLP-NDFTFPCVFKASASLHMPVTGKQLHA 133
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
LK G VFVG DMY+K GL E
Sbjct: 134 LALKGGNILDVFVGCSAFDMYSK-------------------------------TGLRPE 162
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+R +F M ++ +W ++ +Q+G +AI F++ + TF + L AC
Sbjct: 163 ARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACAD 222
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA--WKNVVSWT 244
+++LE G+Q+H FI+R+ ++++V V + L+D Y KC I +E VF + +NVVSW
Sbjct: 223 IVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWC 282
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++L QN E A +F R +EP DF + SV+S+CA L LE G H +L
Sbjct: 283 SLLAALVQNHEEERACMVFLQ-ARKEVEPTDFMISSVLSACAELGGLELGRSVHALALKA 341
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
+ I V +ALV YGKCG+IE + ++F EM R+ V+W A++ GYA G + + LF
Sbjct: 342 CVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLF 401
Query: 365 EKMLSH--GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL 422
++M S G+ VTL+ VLSACSRAG VE+G FE M YGI P +HY C++D+L
Sbjct: 402 QEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLL 461
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYV 482
R+G ++ A FI +MP P W LL +C++HG ++GK AAE L ELDP + ++V
Sbjct: 462 GRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTKLGKIAAEKLFELDPDDSGNHV 521
Query: 483 LLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYA 542
+ S++ AS G+W+ + +R+ MR+ G++K+ G SW+ K+RVH+F A D + +I A
Sbjct: 522 VFSNMLASAGRWEEATIVRKEMRDIGIKKNVGYSWVAVKNRVHVFQAKDSFHEKNSEIQA 581
Query: 543 ELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVK 602
L KL +M K GYVPD + L D+E EK + +HSEK+A+AFGL+ +P G+PIR+ K
Sbjct: 582 MLAKLRGEMKKAGYVPDANLSLFDLEEEEKASEVWYHSEKIALAFGLITLPRGVPIRITK 641
Query: 603 NLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
NLR+C DCH+A K+ISKI REI+VRD RFH FK+G CSC D+W
Sbjct: 642 NLRICIDCHSAIKFISKIVGREIIVRDNNRFHRFKDGWCSCKDYW 686
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 176/381 (46%), Gaps = 39/381 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVY-NLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
MP + +WN +S G DA+ + + DG N ITF L + ++
Sbjct: 170 MPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPN--AITFCAFLNACADIVSLE 227
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
LGRQ+HG I++ + V V + L+D Y K G I ++ F +
Sbjct: 228 LGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRI---------------- 271
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
G ++ +SW +++ L+QN E A +F + R E D F S
Sbjct: 272 -------------GSGRRNVVSWCSLLAALVQNHEEERACMVFLQARKEVEPTD-FMISS 317
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL+AC L LE G+ +HA ++ ++N+FVGSALVD+Y KC SI+YAE VFR M +N
Sbjct: 318 VLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERN 377
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRN--GIEPDDFTLGSVISSCANLASLEEGTQ- 296
+V+W AM+ GY G + A+ +F M GI TL SV+S+C+ ++E G Q
Sbjct: 378 LVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQI 437
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFG 355
F G+ +V G+ G ++ ++ M + +S W AL+ G
Sbjct: 438 FESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHG 497
Query: 356 KANETIDLFEKMLSHGLKPDE 376
K EK+ L PD+
Sbjct: 498 KTKLGKIAAEKLFE--LDPDD 516
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 125/263 (47%), Gaps = 3/263 (1%)
Query: 193 GKQIHAFIIR-NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYG 251
G+ +HA I+R +D F+ + LV+MY K A+ V + VV+WT+++ G
Sbjct: 26 GRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSLISGCV 85
Query: 252 QNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFIT 311
N A+ F NM+R + P+DFT V + A+L G Q H +L G I +
Sbjct: 86 HNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILDVF 145
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG 371
V + Y K G ++ +F+EM R+ +W A +S + G+ + I F+K L
Sbjct: 146 VGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVD 205
Query: 372 LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEA 431
+P+ +T L+AC+ +E GR +V+ R + +ID + G + +
Sbjct: 206 GEPNAITFCAFLNACADIVSLELGRQLHGFIVRSR-YREDVSVFNGLIDFYGKCGDIVSS 264
Query: 432 KSFINKM-PFPPDAIGWATLLSS 453
+ +++ + + W +LL++
Sbjct: 265 ELVFSRIGSGRRNVVSWCSLLAA 287
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 250/647 (38%), Positives = 361/647 (55%), Gaps = 70/647 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + WN +I +A +G + A+ +Y+ ML G+ ++ T+ +L S ++
Sbjct: 69 IPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGV-RPNKYTYPFVLKACSGLLAIED 127
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +IH H FG S VFV + LVD YAK G++
Sbjct: 128 GVEIHSHAKMFGLESDVFVCTALVDFYAKCGILV-------------------------- 161
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
E++RLF M +D ++W MI G GL +A+ L +M+ EG+ + T V
Sbjct: 162 -----EAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGV 216
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C LL YA +F M +N
Sbjct: 217 LPTCQCLL--------------------------------------YARKIFDVMGVRNE 238
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW+AM+ GY + C +EA+ IF MQ +GI+PD T+ V+ +C++LA+L+ G HG
Sbjct: 239 VSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGY 298
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+V G + + NAL+ Y KCG I + +FN M+ D VSW A++ GY G E
Sbjct: 299 LIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEA 358
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LF +L+ GLKPD++T I +LS+CS +GLV +GR +F+ M +++ I P +H CM+D
Sbjct: 359 LGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVD 418
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
IL RAG ++EA FI MPF PD W+ LLS+CRIH N+E+G+ ++ + L P + +
Sbjct: 419 ILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGN 478
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
+VLLS+IY++ G+WD + +R T ++ G++K PGCSWI+ VH F D S QI
Sbjct: 479 FVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQI 538
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
+LE+L +M + GY + S V DVE EK ++L +HSEKLAIAFG+L + G PI V
Sbjct: 539 NRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILV 598
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCH A K+++ IT+REI VRDA RFH FKNG C+CGDFW
Sbjct: 599 TKNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 645
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 183/402 (45%), Gaps = 79/402 (19%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
++IH H LK + V L +Y + A+R FDE+P ++++
Sbjct: 27 AKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVIL---------- 76
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
W +I NG AIDL+ M G+ +++T+ V
Sbjct: 77 ---------------------WNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFV 115
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC GLLA+E+G +IH+ + +VFV +ALVD Y KC + A+ +F +M+ ++V
Sbjct: 116 LKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDV 175
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+W AM+ G G ++AV++ MQ GI P+ T+ V+ +C L
Sbjct: 176 VAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCL------------ 223
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
Y + ++F+ M VR+EVSW+A++ GY E
Sbjct: 224 ------------------LYAR--------KIFDVMGVRNEVSWSAMIGGYVASDCMKEA 257
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG--RHYFEIMVKEYGIRPIHDHYTC- 417
+D+F M G+ PD T++GVL ACS ++ G H + ++V+ + D C
Sbjct: 258 LDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGY-LIVRGFAT----DTLICN 312
Query: 418 -MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ID+ S+ G++ A+ N+M D + W ++ IHG
Sbjct: 313 ALIDMYSKCGKISFAREVFNRMD-RHDIVSWNAMIIGYGIHG 353
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 120/223 (53%), Gaps = 3/223 (1%)
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L AC +L E K+IH ++N + V L +Y C + A +F + +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
V+ W ++ Y NG + A+ ++ +M G+ P+ +T V+ +C+ L ++E+G + H
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ + GL S + V ALV FY KCG + ++ RLF+ M+ RD V+W A+++G + +G ++
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
+ L +M G+ P+ T++GVL C + R F++M
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTCQ---CLLYARKIFDVM 233
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 6/180 (3%)
Query: 281 VISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD 340
++ +C SL E + H L + +V + L Y C + + RLF+E+
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 341 EVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
+ W ++ YA G + IDL+ ML G++P++ T VL ACS +E G
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 401 IMVKEYGIRPIHDHYTC--MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
K +G+ D + C ++D ++ G L EA+ + M D + W +++ C ++G
Sbjct: 134 -HAKMFGLES--DVFVCTALVDFYAKCGILVEAQRLFSSMSH-RDVVAWNAMIAGCSLYG 189
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 250/653 (38%), Positives = 380/653 (58%), Gaps = 49/653 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL--GR 62
D VSWN ++ +A HG +++A ++ ML +G I S + ++++S C L GR
Sbjct: 290 DVVSWNAMLGAYAQHGHMSEAALLFARMLHEG------IPPSKVTLVNASTGCSSLRFGR 343
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
IH L+ G + +G+ L+DMY R G
Sbjct: 344 MIHACALEKGLDRDIVLGNALLDMYT-------------------------------RCG 372
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
EE+R LF G+ +++SW TMI G Q G + A++LF+ M+LEG+A + T+ ++L
Sbjct: 373 SPEEARHLFEGIPG-NAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLE 431
Query: 183 ACGG----LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
A A+ EG+++H+ I+ + +G+A+V MY C +I A + F+ A +
Sbjct: 432 AVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAME 491
Query: 239 N---VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
+ VVSW A++ Q+G + A+ F M +G+ P+ T +V+ +CA A+L EG
Sbjct: 492 DRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGV 551
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALVSGYAKF 354
H +G+ S + V+ AL + YG+CG++E + +F ++ V RD V + A+++ Y++
Sbjct: 552 IVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQN 611
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G A E + LF +M G +PDE + + VLSACS GL ++G F M + YGI P DH
Sbjct: 612 GLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDH 671
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
Y C +D+L RAG L +A+ I M P + W TLL +CR + +V+ G+ A + ELD
Sbjct: 672 YACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELD 731
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS 534
P + ++YV+LS+I A GKWD +++R M +G+RK G SWI+ KSRVH F A D S
Sbjct: 732 PGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFVAGDRSH 791
Query: 535 PYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPP 594
P S++IY ELE+L+ ++ + GYVPD VL V+ +EK ++L HSE+LAIA G++
Sbjct: 792 PRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSST 851
Query: 595 GLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+RV+KNLRVC DCHNATK+ISKI +EI+VRD RFH F +G CSCGD+W
Sbjct: 852 D-TVRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/456 (26%), Positives = 206/456 (45%), Gaps = 47/456 (10%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSWN I+ +A G ++ A++++ M +G+ +RIT L + + R R I
Sbjct: 192 DLVSWNAAIAANAQSGDLDMALELFQRMQLEGV-RPARITLVITLSVCAKIR---QARAI 247
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H + + G + V + L YA+LG + AK FD E+++V +N
Sbjct: 248 HSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWN------------ 295
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
M+ Q+G EA LF M EG+ + T + T C
Sbjct: 296 -------------------AMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGC 336
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+L G+ IHA + ++ +G+AL+DMY +C S + A +F + N VSW
Sbjct: 337 S---SLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIP-GNAVSWN 392
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFT----LGSVISSCANLASLEEGTQFHGR 300
M+ G Q G + A+++F MQ G+ P T L +V S+ ++ EG + H R
Sbjct: 393 TMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSR 452
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE---VSWTALVSGYAKFGKA 357
+ G S + A+V Y CG I+++ F + D VSW A++S ++ G
Sbjct: 453 IVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHG 512
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
+ F +M HG+ P+++T + VL AC+ A + +G + ++ G+ T
Sbjct: 513 KRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHD-HLRHSGMESNVFVATA 571
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+ + R G LE A+ K+ D + + ++++
Sbjct: 572 LASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAA 607
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 196/414 (47%), Gaps = 43/414 (10%)
Query: 48 MLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKN 107
+L + R + GR+IH I+ G + G+ L+ +Y K + D
Sbjct: 35 LLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGD------------ 80
Query: 108 IVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL 167
VEE +F ++ +D SWTT+IT ++G + AI +F M+
Sbjct: 81 ----------------VEE---VFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQ 121
Query: 168 EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY 227
EG+ D TF +VL AC L L +G+ IHA+I+ + + + + L+ +Y C +
Sbjct: 122 EGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVAS 181
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN 287
A +F M +++VSW A + Q+G + A+++F MQ G+ P TL +S CA
Sbjct: 182 AMLLFERME-RDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAK 240
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
+ + H +GL + VS AL + Y + G+++ + +F+ RD VSW A+
Sbjct: 241 ---IRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAM 297
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYG 407
+ YA+ G +E LF +ML G+ P +VTL+ + CS + GR + E G
Sbjct: 298 LGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSS---LRFGRMIHACAL-EKG 353
Query: 408 IRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+ ++D+ +R G EEA+ + P +A+ W T+++ G ++
Sbjct: 354 LDRDIVLGNALLDMYTRCGSPEEARHLFEGI--PGNAVSWNTMIAGSSQKGQMK 405
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 213/468 (45%), Gaps = 53/468 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+ D SW +I+ + HG A+ +++ M ++G+ +TF + ++ + R DL
Sbjct: 88 LEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGV-RCDAVTF--LAVLKACARLGDL 144
Query: 61 --GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
GR IH I++ G + + L+ +Y G + A F+ + E+++V
Sbjct: 145 SQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLV--------- 194
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
SW I Q+G A++LF+ M+LEG+ + T
Sbjct: 195 ----------------------SWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLV 232
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
L+ C + + + IH+ + + + + V +AL Y + + A+ VF A +
Sbjct: 233 ITLSVCA---KIRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAER 289
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+VVSW AML Y Q+G EA +F M GI P TL + + C +SL G H
Sbjct: 290 DVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGC---SSLRFGRMIH 346
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
+L GL I + NAL+ Y +CG+ E++ LF + + VSW +++G ++ G+
Sbjct: 347 ACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIP-GNAVSWNTMIAGSSQKGQMK 405
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACS----RAGLVEKGRH-YFEIMVKEYGIRPIHD 413
++LF++M G+ P T + +L A + A + +GR + I+ Y P
Sbjct: 406 RALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIG 465
Query: 414 HYTCMIDILSRAGRLEEAKSFINK--MPFPPDAIGWATLLSSCRIHGN 459
T ++ + + G ++EA + + M D + W ++SS HG+
Sbjct: 466 --TAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGH 511
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 170/336 (50%), Gaps = 16/336 (4%)
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L A G L +G++IHA I+ ++ + G+ L+ +Y KC+S+ E VF + ++
Sbjct: 35 LLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLEVRD 92
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
SWT ++ Y ++G ++ A+ +F MQ+ G+ D T +V+ +CA L L +G H
Sbjct: 93 EASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHA 152
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ +GL ++N L+ YG CG + + LF M RD VSW A ++ A+ G +
Sbjct: 153 WIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERME-RDLVSWNAAIAANAQSGDLDM 211
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
++LF++M G++P +TL+ LS C++ + + R I V+E G+ T +
Sbjct: 212 ALELFQRMQLEGVRPARITLVITLSVCAK---IRQARAIHSI-VRESGLEQTLVVSTALA 267
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV-EIGKWAAESLLELDPYNP 478
+R G L++AK ++ D + W +L + HG++ E A L E P +
Sbjct: 268 SAYARLGHLDQAKEVFDRAA-ERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSK 326
Query: 479 ASYVLLSSIYASK--GKWDHVSQLRRTMREKGVRKD 512
+ V S+ +S G+ H L EKG+ +D
Sbjct: 327 VTLVNASTGCSSLRFGRMIHACAL-----EKGLDRD 357
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 128/277 (46%), Gaps = 13/277 (4%)
Query: 4 HDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQ 63
HD VSWN +IS + HG A+ + M G+ ++IT +L + + G
Sbjct: 494 HDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAP-NQITCVAVLDACAGAAALTEGVI 552
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITGLLRRG 122
+H H+ G S VFV + L MY + G + A+ F+++ E+++V++N MI + G
Sbjct: 553 VHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNG 612
Query: 123 LVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQFTF 177
L E+ +LF M+ + D S+ ++++ GL E ++FR MR G+A + +
Sbjct: 613 LAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHY 672
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI---KYAESVFRT 234
+ G L + +++ I D K V V L+ K + + + A S+ R
Sbjct: 673 ACAVDVLGRAGWLADAEEL---IRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRE 729
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGI 271
+ + ++ + G +EA ++ M+ G+
Sbjct: 730 LDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGL 766
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/684 (34%), Positives = 382/684 (55%), Gaps = 76/684 (11%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
SW ++ + G + +K++ LM+ +G+ F + S + +G+ ++ +
Sbjct: 78 SWTAIMEMYCGLGDYEETIKLFYLMVNEGV-RPDHFVFPKVFKACSELKNYRVGKDVYDY 136
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
+L GF V ++DM+ K G + + +
Sbjct: 137 MLSIGFEGNSCVKGSILDMFIKCGRM-------------------------------DIA 165
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
RR F ++ KD W M++G G ++A+++FR+M LEG+ + T S ++AC L
Sbjct: 166 RRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNL 225
Query: 188 LALEEGKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIKYAE----------------- 229
L G++IH + I+ + D ++ VG++LVD Y KC+S++ A
Sbjct: 226 SLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAM 285
Query: 230 --------------------------SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIF 263
SVF ++ ++VV W +++ Q+G S A+ +
Sbjct: 286 LAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLL 345
Query: 264 CNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKC 323
M + +E + T+ S + +C+ LA+L +G + H + GL + + N+L+ YG+C
Sbjct: 346 REMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRC 405
Query: 324 GNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVL 383
G+I+ S R+F+ M RD VSW ++S Y G + ++LF++ + GLKP+ +T +L
Sbjct: 406 GSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLL 465
Query: 384 SACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPD 443
SACS +GL+E+G YF++M EY + P + Y CM+D+LSRAG+ E FI KMPF P+
Sbjct: 466 SACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPN 525
Query: 444 AIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRT 503
A W +LL +CRIH N ++ ++AA L EL+P + +YVL+++IY++ G+W+ +++R
Sbjct: 526 AAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCL 585
Query: 504 MREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSV 563
M+E+GV K PGCSWI+ K ++H F D S P +QI A++E L + + GYVPD + V
Sbjct: 586 MKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFV 645
Query: 564 LHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQR 623
L DV+ EK L HSEK+A+AFGL+ G P+R++KNLRVC DCH+ATK+ISK+ +R
Sbjct: 646 LQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKR 705
Query: 624 EILVRDAVRFHLFKNGECSCGDFW 647
+I++RD RFH F +G CSCGD+W
Sbjct: 706 DIIMRDNYRFHHFVDGVCSCGDYW 729
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 218/448 (48%), Gaps = 57/448 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+ F D WN+++SG+ S G A+ V+ M+ +G+ S IT ++ + ++ +
Sbjct: 172 IEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNS-ITIASAVSACTNLSLLRH 230
Query: 61 GRQIHGHILKF-GFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTM--ITG 117
GR+IHG+ +K S + VG+ LVD YAK + A+R F + + ++V +N M +TG
Sbjct: 231 GREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTG 290
Query: 118 LLRRGLVEESRRLFRGM----------KDKDSISWTTMITGLMQNGLEREAIDLFREMRL 167
+ G + + F+ M +D + W ++I+ Q+G A+DL REM L
Sbjct: 291 FTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNL 350
Query: 168 EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY 227
+ ++ T S L AC L AL +GK+IH FIIR F+ ++L+DMY +C SI+
Sbjct: 351 SNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQK 410
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN 287
+ +F M +++VSW M+ YG +G +AV +F + G++P+ T +++S+C++
Sbjct: 411 SRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSH 470
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
+EEG ++ + T Y +E + +
Sbjct: 471 SGLIEEGWKYF---------------KMMKTEYAMDPAVE---------------QYACM 500
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSAC---SRAGLVE-KGRHYFEIMV 403
V ++ G+ NET++ EKM +P+ +L AC L E R+ FE+
Sbjct: 501 VDLLSRAGQFNETLEFIEKM---PFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEP 557
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEA 431
+ G +Y M +I S AGR E+A
Sbjct: 558 QSSG------NYVLMANIYSAAGRWEDA 579
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 200/443 (45%), Gaps = 77/443 (17%)
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
LG Q+H ++ G F+GS L+++Y +
Sbjct: 28 LGFQVHAQLVVNGVDVCEFLGSRLLEVYCQ------------------------------ 57
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
G VE++RR+F M +++ SWT ++ G E I LF M EG+ D F F
Sbjct: 58 -TGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPK 116
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
V AC L GK ++ +++ + N V +++DM+ KC + A F + +K+
Sbjct: 117 VFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKD 176
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
V W M+ GY G ++A+ +F M G++P+ T+ S +S+C NL+ L G + HG
Sbjct: 177 VFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHG 236
Query: 300 RSL-VTGLISFITVSNALVTFYGKCGNIEDSHR--------------------------- 331
+ V L S + V N+LV +Y KC ++E + R
Sbjct: 237 YCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGD 296
Query: 332 ----------------LFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPD 375
+F+E++ RD V W +++S A+ G++ +DL +M ++ +
Sbjct: 297 GKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVN 356
Query: 376 EVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFI 435
VT++ L ACS+ + +G+ + +++ G+ + +ID+ R G +++++
Sbjct: 357 TVTMVSALPACSKLAALRQGKEIHQFIIR-CGLDTCNFILNSLIDMYGRCGSIQKSRRIF 415
Query: 436 NKMPFPPDAIGWATLLSSCRIHG 458
+ MP D + W ++S +HG
Sbjct: 416 DLMP-QRDLVSWNVMISVYGMHG 437
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 122/231 (52%), Gaps = 2/231 (0%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
+ S+L C L L G Q+HA ++ N F+GS L+++YC+ ++ A +F M+
Sbjct: 13 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 72
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
+NV SWTA++ Y G EE +K+F M G+ PD F V +C+ L + G
Sbjct: 73 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 132
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
+ L G V +++ + KCG ++ + R F E+ +D W +VSGY G+
Sbjct: 133 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 192
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR--HYFEIMVKE 405
+ +++F KM+ G+KP+ +T+ +SAC+ L+ GR H + I V+E
Sbjct: 193 FKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEE 243
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 98/233 (42%), Gaps = 18/233 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN++IS + HG DAV ++ GL + ITF+ +L S ++
Sbjct: 418 MPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGL-KPNHITFTNLLSACSHSGLIEE 476
Query: 61 GRQIHGHI-LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITGL 118
G + + ++ V + +VD+ ++ G + +++P E N ++ +++
Sbjct: 477 GWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGAC 536
Query: 119 ---LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
L E + R ++ + S ++ M G +A + M+ G
Sbjct: 537 RIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERG------ 590
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRN-DHKDNVFVGSALVDMYCKCKSIKY 227
+T G +E +++H+F++ + H + + + +Y K I Y
Sbjct: 591 -----VTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGY 638
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 248/672 (36%), Positives = 388/672 (57%), Gaps = 66/672 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLM---------------LKDGLGNLSRITF 45
MP + +SWN L+SG+ +G +++A KV++ M +++GL + + + F
Sbjct: 73 MPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLF 132
Query: 46 STMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLI---------YDA 96
M + V LG I + +F P+ D+ A +I +A
Sbjct: 133 WRMPEKNVVSWTVMLGGLIEDG--RVDEARRLFDMIPVKDVVASTNMIGGLCSEGRLSEA 190
Query: 97 KRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLER 156
+ FDE+P++N+V + +MI+G V+ +R+LF M DK+ ++WT M+ G ++G
Sbjct: 191 REIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDKNEVTWTAMLKGYTRSGRIN 250
Query: 157 EAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALV 216
EA +LF+ M ++ +A AC G+ I F + +
Sbjct: 251 EAAELFKAMPVKPVA-----------ACNGM--------IMGFGLNGE------------ 279
Query: 217 DMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDF 276
+ A VF M K+ +W+A++ Y + G EA+ +F MQR G+ P+
Sbjct: 280 --------VGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFP 331
Query: 277 TLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
++ S++S C +LASL+ G Q H + + + I VS+ L+T Y KCG++ R+F+
Sbjct: 332 SIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRF 391
Query: 337 NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR 396
+ +D V W ++++GYA+ G + +++F +M S G PDE+T IGVLSAC G V++G
Sbjct: 392 SSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGL 451
Query: 397 HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRI 456
FE M +Y + +HY CM+D+L RAG+L EA + I MP DAI W LLS+CR
Sbjct: 452 EIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRT 511
Query: 457 HGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCS 516
H N+++ + AA+ LL+L+P + Y+LLS++YAS+ +W V++LR+TMR + V K PGCS
Sbjct: 512 HKNLDLAEIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCS 571
Query: 517 WIKYKSRVHIFSADDWSS-PYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKM 575
WI+ ++VH+F+ +S P + I +LEKL + + GY PD S V+HDV+ +K+
Sbjct: 572 WIEVDNKVHMFTGGGSASHPEHEMIMKKLEKLGASLREAGYCPDGSFVMHDVDEEDKVHS 631
Query: 576 LNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHL 635
L HHSEK+A+A+GLL +P G PIRV+KNLRVC DCH+A K I+++T REI++RDA RFH
Sbjct: 632 LRHHSEKMAVAYGLLKVPVGKPIRVMKNLRVCGDCHSAIKLIAQVTGREIILRDANRFHH 691
Query: 636 FKNGECSCGDFW 647
FK+G CSC DFW
Sbjct: 692 FKDGLCSCRDFW 703
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 182/413 (44%), Gaps = 41/413 (9%)
Query: 73 FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFR 132
F S + + +A+LG I A+ FD+L K + +N ++ G E+++LF
Sbjct: 12 FSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFD 71
Query: 133 GMKDKDSISWTTMITGLMQNGLEREAIDLFREMR---------------LEGLA------ 171
M ++++ISW +++G ++NG+ EA +F +M EGL
Sbjct: 72 KMPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELL 131
Query: 172 ---MDQFTFGSVLTACGGLLA---LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI 225
M + S GGL+ ++E +++ I D V + ++ C +
Sbjct: 132 FWRMPEKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVKD----VVASTNMIGGLCSEGRL 187
Query: 226 KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
A +F M +NVV+WT+M+ GY N + A K+F M + ++ T +++
Sbjct: 188 SEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMP----DKNEVTWTAMLKGY 243
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
+ E + V + N ++ +G G + + +F++M +D+ +W+
Sbjct: 244 TRSGRINEAAELFKAMPVKP----VAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWS 299
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE 405
AL+ Y + G E + LF M G++P+ ++I +LS C ++ GR +V+
Sbjct: 300 ALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRS 359
Query: 406 YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ I+ + +I + + G L K ++ D + W ++++ HG
Sbjct: 360 HFDLDIYVS-SVLITMYIKCGDLVTGKRVFDRFS-SKDIVMWNSIIAGYAQHG 410
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 146/339 (43%), Gaps = 22/339 (6%)
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRND-HKDNVFVGSALVDMYCKCKSIKYAESVFR 233
F+ + +T C G+ A I +D V +A+V Y K A+ +F
Sbjct: 12 FSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFD 71
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE 293
M +N +SW ++ GY +NG EA K+F M + + S++ ++E
Sbjct: 72 KMPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNV----VSWTSMVRGYVQEGLIDE 127
Query: 294 GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK 353
R ++S+ + L+ + G ++++ RLF+ + V+D V+ T ++ G
Sbjct: 128 AELLFWRMPEKNVVSWTVMLGGLI----EDGRVDEARRLFDMIPVKDVVASTNMIGGLCS 183
Query: 354 FGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
G+ +E ++F++M + V ++S + V+ R FE+M + +
Sbjct: 184 EGRLSEAREIFDEMPQRNV----VAWTSMISGYAMNNKVDVARKLFEVMPDKNEVT---- 235
Query: 414 HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL 473
+T M+ +R+GR+ EA MP P A ++ ++G V +W + + E
Sbjct: 236 -WTAMLKGYTRSGRINEAAELFKAMPVKPVA-ACNGMIMGFGLNGEVGKARWVFDQMKEK 293
Query: 474 DPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKD 512
D ++ L IY KG L M+ +GVR +
Sbjct: 294 D---DGTWSALIKIYERKGFELEALALFSLMQREGVRPN 329
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 170/407 (41%), Gaps = 67/407 (16%)
Query: 276 FTLGSVISSCANLASLEEGTQFHGRSLVTGLIS-FITVSNALVTFYGKCGNIEDSHRLFN 334
F+ + I+ C G R++ L S +T NA+V Y ++ +LF+
Sbjct: 12 FSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFD 71
Query: 335 EMNVRDEVSWTALVSGYAKFGKANETIDLFEKM---------------LSHGLKPDEVTL 379
+M R+ +SW LVSGY K G +E +F+KM + GL DE L
Sbjct: 72 KMPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGL-IDEAEL 130
Query: 380 I-------GVLS-ACSRAGLVEKGRHYFEIMVKEYGIRPIHD--HYTCMIDILSRAGRLE 429
+ V+S GL+E GR + + + + P+ D T MI L GRL
Sbjct: 131 LFWRMPEKNVVSWTVMLGGLIEDGR--VDEARRLFDMIPVKDVVASTNMIGGLCSEGRLS 188
Query: 430 EAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP-YNPASYVLLSSIY 488
EA+ ++MP + + W +++S ++ V++ A L E+ P N ++ + Y
Sbjct: 189 EAREIFDEMP-QRNVVAWTSMISGYAMNNKVDV----ARKLFEVMPDKNEVTWTAMLKGY 243
Query: 489 ASKGKWDHVSQLRRTMREKGVRKDPG-------------CSWIKYKSRVHIFSADDWSSP 535
G+ + ++L + M K V G W+ + + DD +
Sbjct: 244 TRSGRINEAAELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMK----EKDDGTWS 299
Query: 536 YSDQIYA----ELEKLN--RKMIKEGYVPDMSSVLHDVELSEKIKMLNH----HSEKLAI 585
+IY ELE L M +EG P+ S++ + + + L+H HS+ +
Sbjct: 300 ALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRS 359
Query: 586 AFGL-LFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAV 631
F L +++ L +K C D + + + ++I++ +++
Sbjct: 360 HFDLDIYVSSVLITMYIK----CGDLVTGKRVFDRFSSKDIVMWNSI 402
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 253/643 (39%), Positives = 364/643 (56%), Gaps = 50/643 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + S++ LI + + A+ ++ ML GL +R+ + S+ + C L
Sbjct: 74 VPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRV------LPSAVKACAGL 127
Query: 61 -----GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
RQ+HG GF S FV S LV MY K I DA R FD + E ++V ++ ++
Sbjct: 128 SALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALV 187
Query: 116 TGLLRRGLVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLEGLA 171
R+G V+E++RLF M D + ISW MI G +GL EA+ +F +M L G
Sbjct: 188 AAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFE 247
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
D T SVL A G L L G IH ++I+ + V SAL+DMY KC V
Sbjct: 248 PDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQV 307
Query: 232 FRTMAWK-----------------------------------NVVSWTAMLVGYGQNGCS 256
F M NVVSWT+M+ QNG
Sbjct: 308 FDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRD 367
Query: 257 EEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNAL 316
EA+++F MQ G++P+ T+ ++ +C N+A+L G H SL G+ + + V +AL
Sbjct: 368 MEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSAL 427
Query: 317 VTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDE 376
+ Y KCG I+ S F+ + ++ V W A+++GYA GKA E +++F+ M G KPD
Sbjct: 428 IDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDI 487
Query: 377 VTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFIN 436
++ VLSACS++GL E+G +YF M +YGI +HY CM+ +LSRAG+LE+A + I
Sbjct: 488 ISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIR 547
Query: 437 KMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDH 496
+MP PDA W LLSSCR+H NV +G+ AAE L EL+P NP +Y+LLS+IYASKG W+
Sbjct: 548 RMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNE 607
Query: 497 VSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGY 556
V+++R M+ KG+RK+PGCSWI+ K++VH+ A D S P QI L+KL+ +M K GY
Sbjct: 608 VNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIENLDKLSMEMKKLGY 667
Query: 557 VPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
P+++ VL DVE +K ++L HSEKLA+ FGLL PPG P++
Sbjct: 668 FPEINFVLQDVEEQDKEQILCGHSEKLAVVFGLLNTPPGYPLQ 710
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/501 (25%), Positives = 209/501 (41%), Gaps = 111/501 (22%)
Query: 35 DGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIY 94
L L + + + ++S+ + RQ H HILK G + + + L+ YA
Sbjct: 6 QALALLDSVQHTILNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFA 65
Query: 95 DAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGL 154
DA D +PE N+ S++T+I +
Sbjct: 66 DATLVLDLVPEPNV-------------------------------FSFSTLIYAFSKFHQ 94
Query: 155 EREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSA 214
A+ F +M GL D S + AC GL AL+ +Q+H + + FV S+
Sbjct: 95 FHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSS 154
Query: 215 LVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSE----------------- 257
LV MY KC I+ A VF M +VVSW+A++ Y + GC +
Sbjct: 155 LVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPN 214
Query: 258 ------------------EAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
EAV +F +M G EPD T+ SV+ + +L L G HG
Sbjct: 215 LISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHG 274
Query: 300 RSLVTGLISFITVSNALVTFYGKC-------------------------------GNIED 328
+ GL+S VS+AL+ YGKC G +E
Sbjct: 275 YVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVES 334
Query: 329 SHRLFNEMNVR----DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
S RLF ++ + + VSWT++++ ++ G+ E ++LF +M G+KP+ VT+ +L
Sbjct: 335 SLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLP 394
Query: 385 ACSRAGLVEKGR--HYFEIMVKEYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPF 440
AC + G+ H F + GI D Y + +ID+ ++ GR++ ++ + +P
Sbjct: 395 ACGNIAALMHGKAAHCFSL---RRGIST--DVYVGSALIDMYAKCGRIQASRICFDGIP- 448
Query: 441 PPDAIGWATLLSSCRIHGNVE 461
+ + W +++ +HG +
Sbjct: 449 TKNLVCWNAVIAGYAMHGKAK 469
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 4/186 (2%)
Query: 281 VISSCAN--LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
I +C N ASL + Q H L TGL + ++ L++ Y D+ + + +
Sbjct: 17 TILNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPE 76
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
+ S++ L+ ++KF + + + F +ML+ GL PD L + AC+ ++ R
Sbjct: 77 PNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQV 136
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
I G + ++ + + ++ +A ++M F PD + W+ L+++ G
Sbjct: 137 HGI-ASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRM-FEPDVVSWSALVAAYARQG 194
Query: 459 NVEIGK 464
V+ K
Sbjct: 195 CVDEAK 200
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 247/645 (38%), Positives = 370/645 (57%), Gaps = 34/645 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D N +I G+A + +AV +Y M++ G+ + T+ +L + V LGR+
Sbjct: 75 DPFICNTMIRGYARSQNPYEAVSLYYFMVERGVP-VDNYTYPFVLAACARLGAVKLGRRF 133
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +LK GFGS +FV + L+ Y G A FDE +++V
Sbjct: 134 HCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVV--------------- 178
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAMDQFTFGSVLTA 183
+W MI + GL +A DL EM +L+ L D+ T S++ A
Sbjct: 179 ----------------TWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPA 222
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C L LE GK +H++ +N+ V +A++DMYCKC I+ A+ VF + K+V+SW
Sbjct: 223 CAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSW 282
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
T+ML G ++G +EA+ +F MQ N IE D+ TL V+S+CA +L++G H
Sbjct: 283 TSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDK 342
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
+ + + ALV Y KCG+I+ + ++F M VR+ +W AL+ G A G + I L
Sbjct: 343 FEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISL 402
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F++M L PD+VT I +L ACS AGLV++G F+ M ++ I P +HY C++D+L
Sbjct: 403 FDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLC 462
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
RA ++++A +FI MP +++ WATLL +CR G+ ++ + ++EL+P + YV+
Sbjct: 463 RARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVM 522
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LS++YA +WDH +LR+ M+ KG+ K PGCSWI+ +H F A D S ++QIYA
Sbjct: 523 LSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAM 582
Query: 544 LEKLNRKM-IKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVK 602
+E++ R++ + G+VP ++VL D+E EK L HSEKLAIA GL+ P G PIR+VK
Sbjct: 583 IEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVK 642
Query: 603 NLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
NLRVC+DCH+ K SK+ REI+ RD RFH FK G CSC DFW
Sbjct: 643 NLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 687
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 191/346 (55%), Gaps = 3/346 (0%)
Query: 117 GLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
L G + +R+LF M++ D TMI G ++ EA+ L+ M G+ +D +T
Sbjct: 54 ALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYT 113
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
+ VL AC L A++ G++ H +++N ++FV +AL+ Y C S A VF
Sbjct: 114 YPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDEST 173
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR-NGIEPDDFTLGSVISSCANLASLEEGT 295
++VV+W M+ + G SE+A + M + + + PD+ T+ S++ +CA L +LE G
Sbjct: 174 VRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGK 233
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
H S GL + V+NA++ Y KC +IE + +FN + +D +SWT+++SG AK G
Sbjct: 234 FLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSG 293
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
E + LF+KM + ++ DE+TL+GVLSAC++ G +++G+ Y +++ ++ I
Sbjct: 294 YFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGK-YIHLLIDKFEINCDLVLE 352
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
T ++D+ ++ G ++ A +M + W L+ +HG+ E
Sbjct: 353 TALVDMYAKCGSIDLALQVFRRMRV-RNVFTWNALIGGLAMHGHGE 397
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 167/362 (46%), Gaps = 45/362 (12%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS--IKYAESVFRTMAWKNVVSWTAM 246
++ + KQ HA ++R N S L+ S + YA +F M + M
Sbjct: 23 SISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTM 82
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ GY ++ EAV ++ M G+ D++T V+++CA L +++ G +FH L G
Sbjct: 83 IRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGF 142
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
S + V NAL+ FY CG+ + +F+E VRD V+W +++ + G + + DL ++
Sbjct: 143 GSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDE 202
Query: 367 MLS-HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI-------RPIHDHY--- 415
M L+PDEVT++ ++ AC++ G +E+G+ + KE G+ I D Y
Sbjct: 203 MTKLDNLRPDEVTMVSLVPACAQLGNLERGK-FLHSYSKELGLDENLRVNNAILDMYCKC 261
Query: 416 ---------------------TCMIDILSRAGRLEEAKSFINKMPFPP---DAIGWATLL 451
T M+ L+++G +EA + KM D I +L
Sbjct: 262 DDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVL 321
Query: 452 SSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS----IYASKGKWDHVSQLRRTMREK 507
S+C G ++ GK+ L +D + ++L + +YA G D Q+ R MR +
Sbjct: 322 SACAQTGALDQGKYIH---LLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVR 378
Query: 508 GV 509
V
Sbjct: 379 NV 380
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 244/651 (37%), Positives = 373/651 (57%), Gaps = 35/651 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V+WN +++G+A+HG + A+ M G + T ++L + + +
Sbjct: 160 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQ 219
Query: 61 GRQIHGHILKFGFGS---YVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
G +H + L+ V +G+ L+DMYAK K++V
Sbjct: 220 GTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKC---------------KHLVY------- 257
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLA-MDQFT 176
+ R+F GM ++ ++W+ +I G + EA +LF++M +EG+ + +
Sbjct: 258 ---------ACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATS 308
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
S L C L L G Q+HA + ++ ++ G++L+ MY K I A +F +A
Sbjct: 309 VASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIA 368
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
K+ +S+ A+L GY QNG +EEA +F MQ ++PD T+ S+I +C++LA+L+ G
Sbjct: 369 IKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRC 428
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
HG ++ GL ++ N+L+ Y KCG I+ S ++F++M RD VSW +++GY G
Sbjct: 429 SHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGL 488
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
E LF M + G +PD+VT I +++ACS +GLV +G+H+F+ M +YGI P +HY
Sbjct: 489 GKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYI 548
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY 476
CM+D+L+R G L+EA FI MP D W LL +CRIH N+++GK + + +L P
Sbjct: 549 CMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPE 608
Query: 477 NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPY 536
++VLLS+I+++ G++D +++R + KG +K PGCSWI+ +H F D S P
Sbjct: 609 GTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGGDQSHPC 668
Query: 537 SDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGL 596
S IY EL+ + + K GY D S VL D+E EK K L +HSEKLAIAFG+L +
Sbjct: 669 SPDIYHELDNILIDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDK 728
Query: 597 PIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
I V KNLRVC DCH A KY++ + R I+VRDA RFH FKNG+CSCGDFW
Sbjct: 729 TIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDANRFHHFKNGQCSCGDFW 779
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 132/478 (27%), Positives = 238/478 (49%), Gaps = 42/478 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D ++N LI ++ G + A+ +Y ML + ++ TF +L S+ +
Sbjct: 59 IPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPP-NKYTFPFVLKACSALADLCA 117
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR IH H G + +FV + L+D+Y + A F ++P +++V +N M+ G
Sbjct: 118 GRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYAN 177
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G+ + M+D+ GL + T S+
Sbjct: 178 HGMYHHAIAHLLDMQDRG------------------------------GLRPNASTLVSL 207
Query: 181 LTACGGLLALEEGKQIHAFIIR---NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
L AL +G +HA+ +R + +++ V +G+AL+DMY KCK + YA VF M
Sbjct: 208 LPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTV 267
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFT-LGSVISSCANLASLEEGTQ 296
+N V+W+A++ G+ EA +F +M G+ T + S + CA+LA L GTQ
Sbjct: 268 RNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQ 327
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H +G+ + +T N+L++ Y K G I ++ LF+E+ ++D +S+ AL+SGY + GK
Sbjct: 328 LHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGK 387
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR-HYFEIMVKEYGIRPIHDHY 415
A E +F+KM + ++PD T++ ++ ACS ++ GR + ++++ +
Sbjct: 388 AEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALET--SIC 445
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL 473
+ID+ ++ GR++ ++ +KMP D + W T+++ IHG +GK A L +
Sbjct: 446 NSLIDMYAKCGRIDLSRQVFDKMP-ARDIVSWNTMIAGYGIHG---LGKEATTLFLSM 499
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 175/358 (48%), Gaps = 13/358 (3%)
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+ RG + +R++F + D+ ++ +I G AIDL+R M + +++TF
Sbjct: 44 IARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFP 103
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
VL AC L L G+ IHA ++FV +AL+D+Y +C A +VF M +
Sbjct: 104 FVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMR 163
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQ-RNGIEPDDFTLGSVISSCANLASLEEGTQF 297
+VV+W AML GY +G A+ +MQ R G+ P+ TL S++ A +L +GT
Sbjct: 164 DVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSV 223
Query: 298 HGRSLVTGLIS---FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
H L L + + AL+ Y KC ++ + R+F+ M VR+EV+W+AL+ G+
Sbjct: 224 HAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLC 283
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIG-VLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
+ E +LF+ ML G+ T + L C+ + G ++ K GI
Sbjct: 284 DRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKS-GIHADLT 342
Query: 414 HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL 471
++ + ++AG + EA +++ D I + LLS G V+ GK A E+ L
Sbjct: 343 AGNSLLSMYAKAGLINEATMLFDEIAI-KDTISYGALLS-----GYVQNGK-AEEAFL 393
>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/593 (38%), Positives = 356/593 (60%), Gaps = 32/593 (5%)
Query: 55 RRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTM 114
R+ + GRQ+H H++K + V++ + L+ +Y + G + DA+ D
Sbjct: 54 RQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLD------------- 100
Query: 115 ITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
GM +++ +SWT MI+G Q+G EA++LF M G ++
Sbjct: 101 ------------------GMPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANE 142
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
FT +VLT+C ++++ +Q+H+ +++ + + ++FVGS+L+DMY K +I+ A VF
Sbjct: 143 FTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDM 202
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
+ ++ VS TA++ GY Q G +EA+ +F + +G++ + T ++++S + LASL G
Sbjct: 203 LPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYG 262
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
Q HG L L FI + N+L+ Y KCG + S R+F+ M R +SW A++ GY +
Sbjct: 263 KQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRH 322
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G E + LF M + +KPD VTL+ VLS CS GLV++G F+++VKE H
Sbjct: 323 GIGQEVVQLFRTM-TEEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGH 381
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
Y C+ID+L R+G+L++A I MPF P W +LL +CR+H NV +G+ A+ LL+++
Sbjct: 382 YGCVIDLLGRSGQLQKALDLIEHMPFEPTPAIWGSLLGACRVHINVSVGEVVAQKLLDME 441
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS 534
P N +YV+LS+IYA+ G W V ++R+ M E V K+P SWI +H F + +
Sbjct: 442 PGNAGNYVILSNIYAAAGMWKDVFRVRKLMLENTVTKEPAKSWIILDKVIHTFHSSERFH 501
Query: 535 PYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPP 594
P I A+++++ + G+VPD+S VLHDV+ +K +ML HSEKLAI FGL+ PP
Sbjct: 502 PRKKDINAKIKEVYVDVKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPP 561
Query: 595 GLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
GL I+V+KNLR+C DCHN K++SK+ REI +RD RFHL K+G C+CGD+W
Sbjct: 562 GLTIQVMKNLRICVDCHNFAKFVSKVYGREISLRDKNRFHLLKDGACTCGDYW 614
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 177/311 (56%), Gaps = 8/311 (2%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
+ + +TAC AL EG+Q+HA +++ ++ V++ + L+ +Y +C ++ A +V M
Sbjct: 44 YDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMP 103
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
+NVVSWTAM+ GY Q+G EA+++F M R G + ++FTL +V++SC S+++ Q
Sbjct: 104 ERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQ 163
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H + T S + V ++L+ YGK GNI+++ ++F+ + RD VS TA++SGYA+ G
Sbjct: 164 VHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGL 223
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH-YFEIMVKEYGIRPIHDHY 415
+E +DLF ++ S G++ + VT +L++ S + G+ + I+ KE + +
Sbjct: 224 DDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQN- 282
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL-D 474
+ID+ S+ G+L ++ + MP AI W +L HG IG+ + + +
Sbjct: 283 -SLIDMYSKCGKLLYSRRVFDNMP-QRSAISWNAMLMGYGRHG---IGQEVVQLFRTMTE 337
Query: 475 PYNPASYVLLS 485
P S LL+
Sbjct: 338 EVKPDSVTLLA 348
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 161/294 (54%), Gaps = 33/294 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW +ISG++ G +A++++ ML+ G + T +T+L + +
Sbjct: 102 MPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGC-KANEFTLATVLTSCPVHQSIQQ 160
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
Q+H ++K F S++FVGS L+DMY K G I +A++ FD LPE++ V +I+G +
Sbjct: 161 VEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQ 220
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL +E+ +DLFR++ G+ + TF ++
Sbjct: 221 LGLDDEA-------------------------------LDLFRQLYSSGMQCNYVTFTTL 249
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LT+ GL +L GKQ+H I+R + + + ++L+DMY KC + Y+ VF M ++
Sbjct: 250 LTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSA 309
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
+SW AML+GYG++G +E V++F M ++PD TL +V+S C++ ++EG
Sbjct: 310 ISWNAMLMGYGRHGIGQEVVQLFRTMTEE-VKPDSVTLLAVLSGCSHGGLVDEG 362
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 97/165 (58%), Gaps = 4/165 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VS +ISG+A G ++A+ ++ + G+ + +TF+T+L S ++
Sbjct: 203 LPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGM-QCNYVTFTTLLTSLSGLASLNY 261
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+HG IL+ ++ + + L+DMY+K G + ++R FD +P+++ + +N M+ G R
Sbjct: 262 GKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGR 321
Query: 121 RGLVEESRRLFRGMKDK---DSISWTTMITGLMQNGLEREAIDLF 162
G+ +E +LFR M ++ DS++ +++G GL E +D+F
Sbjct: 322 HGIGQEVVQLFRTMTEEVKPDSVTLLAVLSGCSHGGLVDEGLDIF 366
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 249/687 (36%), Positives = 377/687 (54%), Gaps = 77/687 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D + + LIS +HG N+A+K+Y+ + + G I + +++++ C
Sbjct: 38 IPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERG------IKPDMPVFLAAAKACAVS 91
Query: 61 G-----RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
G +++H + G S VFVG+ L+ Y K + A+R FD+L +++V
Sbjct: 92 GDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVV------ 145
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
SWT++ + ++ G R+ +D+FREM G+ +
Sbjct: 146 -------------------------SWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPM 180
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
T S+L AC L L+ GK+IH F +R+ N+FV SALV +Y KC S++ A VF M
Sbjct: 181 TVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLM 240
Query: 236 AWKNVVSWTAMLVGYGQN------------------------------GC-----SEEAV 260
++VVSW +L Y +N GC SEEAV
Sbjct: 241 PHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAV 300
Query: 261 KIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFY 320
++F MQ+ G +P++ T+ S++ +C+ +L G + H + +T + AL+ Y
Sbjct: 301 EMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMY 360
Query: 321 GKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLI 380
KCG++ S +F+ M +D V+W ++ A G E + LF+KML ++P+ VT
Sbjct: 361 AKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFT 420
Query: 381 GVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF 440
GVLS CS + LVE+G F M +++ + P +HY+C++DI SRAGRL EA FI MP
Sbjct: 421 GVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPM 480
Query: 441 PPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQL 500
P A W LL++CR++ NVE+ K +A+ L E++P NP +YV L +I + W SQ+
Sbjct: 481 EPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQV 540
Query: 501 RRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDM 560
R M+E+G+ K PGCSW++ ++VH F D S+ SD+IY L++L KM GY PD
Sbjct: 541 RILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDT 600
Query: 561 SSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKI 620
VL D++ EK + L +HSEKLA+AFG+L + IRV KNLR+C DCHNA KY+SK+
Sbjct: 601 DYVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKV 660
Query: 621 TQREILVRDAVRFHLFKNGECSCGDFW 647
I+VRD++RFH FKNG CSC D W
Sbjct: 661 VGVIIVVRDSLRFHHFKNGNCSCKDLW 687
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 186/381 (48%), Gaps = 37/381 (9%)
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
+I L G +R+LF + D + +T+I+ L +GL EAI ++ ++ G+ D
Sbjct: 18 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 77
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
F + AC K++H R +VFVG+AL+ Y KCK ++ A VF
Sbjct: 78 MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 137
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE 293
+ ++VVSWT++ Y + G + + +F M +G++P+ T+ S++ +CA L L+
Sbjct: 138 DLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKS 197
Query: 294 GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK 353
G + HG ++ G++ + V +ALV+ Y KC ++ ++ +F+ M RD VSW +++ Y K
Sbjct: 198 GKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFK 257
Query: 354 -----------------------------------FGKANETIDLFEKMLSHGLKPDEVT 378
G++ E +++F KM G KP+E+T
Sbjct: 258 NKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEIT 317
Query: 379 LIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
+ +L ACS + + G+ + + + + + T ++ + ++ G L +++ + M
Sbjct: 318 ISSILPACSFSENLRMGKEIHCYVFRHWKVGDL-TSTTALLYMYAKCGDLNLSRNVFDMM 376
Query: 439 PFPPDAIGWATLLSSCRIHGN 459
D + W T++ + +HGN
Sbjct: 377 R-RKDVVAWNTMIIANAMHGN 396
>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
Length = 611
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 250/644 (38%), Positives = 379/644 (58%), Gaps = 42/644 (6%)
Query: 13 ISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRC--VDLGRQIHGHILK 70
++ + +G ++A+ + M + G R+TFS +L + +D GR+IH +
Sbjct: 1 MAAFSHNGCHSEALVFFRRMYQSG-ERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARI 59
Query: 71 FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRL 130
G V VG+ ++ MY K G + DA+ F+EL KN
Sbjct: 60 SGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKN----------------------- 96
Query: 131 FRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM--RLEGLAMDQFTFGSVLTACGGLL 188
S++W M+T +G +REA++LFREM R D+F+F + AC L
Sbjct: 97 --------SVTWNAMMTNYKLDGRDREALELFREMCERSRSARPDKFSFSIAIEACSNLE 148
Query: 189 ALEEGKQIHAFIIRND---HKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK-NVVSWT 244
LE+G++IH + R HKD V VG+AL++MY KC ++ A VF ++ + V W
Sbjct: 149 DLEQGREIHEMLRREGKELHKD-VVVGTALLNMYSKCGDLEEARKVFDSIRHDADSVCWN 207
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQ-RNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
AM+ Y Q+G ++A+ ++ +M + P T +VI CA L++L++G H R
Sbjct: 208 AMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRA 267
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
T + + VSNALV YGKCG ++++ +F+ M ++DE+SW ++S YA G +++ + L
Sbjct: 268 TNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLL 327
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
+++M G+KP EVT +G+LSACS GLV G YF M ++ I+P H+ C+ID+L
Sbjct: 328 YQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLG 387
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
R GRL EA+ + MP +A+ W +LL +C+ HG+++ G AA+ +++ P+ YVL
Sbjct: 388 RGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVL 447
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LS+IYA+ G+W V ++R+ M +GV+K PG SWI+ VH F + D S P ++IY E
Sbjct: 448 LSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWIEIGDVVHEFVSGDRSHPQGEEIYVE 507
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
L K+ +M GYVPD SSV HD+E EK +L HSEKLAI +G + +P +R+VKN
Sbjct: 508 LGKMVEEMKGLGYVPDTSSVFHDLEEEEKEDLLVCHSEKLAIVYGNMVVPGKSMLRIVKN 567
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LRVC DCH ATK++S+IT R+I+VRDA RFHLF+NG CSC D+W
Sbjct: 568 LRVCLDCHTATKFMSRITGRKIVVRDAARFHLFENGSCSCRDYW 611
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 114/248 (45%), Gaps = 39/248 (15%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V WN +I+ +A HG A+ +Y M + TF T++ + + + GR I
Sbjct: 202 DSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAI 261
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H + F + + V + LV MY K G + +A F + K+ + +NT+I
Sbjct: 262 HARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTII--------- 312
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
S + G D +A+ L++EM L+G+ + TF +L+AC
Sbjct: 313 --SSYAYHGHSD--------------------QALLLYQEMDLQGVKPTEVTFVGLLSAC 350
Query: 185 --GGLLALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK-N 239
GGL+A +G + + +++DH K +V ++D+ + + AE V ++M + N
Sbjct: 351 SHGGLVA--DGLD-YFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQAN 407
Query: 240 VVSWTAML 247
V W ++L
Sbjct: 408 AVQWMSLL 415
>gi|302753382|ref|XP_002960115.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
gi|300171054|gb|EFJ37654.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
Length = 653
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 239/645 (37%), Positives = 376/645 (58%), Gaps = 5/645 (0%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
+ SW++L+ + + +A++VY M+++ + ++ T S++L + V+ GR +
Sbjct: 12 NAFSWSILVECYVQNAMYQEALEVYKEMVREEI-SIDAYTLSSVLAACTKLLDVEEGRMV 70
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPE-KNIVMYNTMITGLLRRGL 123
+ GF V V + L+ ++AK G + +A+ F + ++I+ MI G
Sbjct: 71 QRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTAMIGAYC--GS 128
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
+++S+ LF M KD +SW MI G +++A LF M G D +TF S+L A
Sbjct: 129 LKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGA 188
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C LE+G+ +H I + + + L+ MY +C S++ A F ++ K + +W
Sbjct: 189 CASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYSIEKKELGAW 248
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
ML Y Q ++A+ ++ NM G PD FT SV+ SCA+L +L EG H S
Sbjct: 249 NTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTS 308
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
G + + ALV Y KCG++ D+ + F+ ++ +D VSW+A+++ A+ G A E ++L
Sbjct: 309 CGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALEL 368
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
M G+ +EVT VL ACS G + +G YF + +++GI ++ ID+L
Sbjct: 369 SHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLG 428
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
RAG L+EA+ ++ MPF + TLL C++HG+V GK + ++ L+P NP SYVL
Sbjct: 429 RAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKAFTKRIVALEPENPGSYVL 488
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
L+++YA+ G+WD V++LRR MR+KGV++ GCS I+Y+ +++ FS D S+P + +I AE
Sbjct: 489 LNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAE 548
Query: 544 LEKLNRKMI-KEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVK 602
LE+L +M +EGYVPD V HDV +K ++L HSEK+A+ FGL+ PPG +R++K
Sbjct: 549 LERLYSRMKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTLRIIK 608
Query: 603 NLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
NLRVCSDCH K SKIT R I+VRD RFH F+ G CSCGD+W
Sbjct: 609 NLRVCSDCHTVGKLASKITGRRIIVRDGTRFHHFEGGICSCGDYW 653
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 184/365 (50%), Gaps = 32/365 (8%)
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+R++F +K +++ SW+ ++ +QN + +EA+++++EM E +++D +T SVL AC
Sbjct: 1 ARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTK 60
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR------------- 233
LL +EEG+ + + +V V ++L+ ++ KC ++ AESVFR
Sbjct: 61 LLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTA 120
Query: 234 -----------------TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDF 276
TM K+VVSW AM+ Y G ++A +F M G PD +
Sbjct: 121 MIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIY 180
Query: 277 TLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
T S++ +CA+ LE+G H R G + N L++ Y +CG++E + R F +
Sbjct: 181 TFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYSI 240
Query: 337 NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR 396
++ +W +++ YA+F K + + L++ ML G PD T V+ +C+ G + +G+
Sbjct: 241 EKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGK 300
Query: 397 HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRI 456
E G T ++++ ++ G L +AK + + D + W+ ++++
Sbjct: 301 FIHECSTS-CGFEKDVILGTALVNMYAKCGSLADAKKSFDGIS-NKDVVSWSAMIAASAQ 358
Query: 457 HGNVE 461
HG+ E
Sbjct: 359 HGHAE 363
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 258/706 (36%), Positives = 382/706 (54%), Gaps = 67/706 (9%)
Query: 8 SWNLLISGHAS-HGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
+WN ++ H S + A+ Y L L T+ +L ++R GRQ+H
Sbjct: 71 TWNTIMRAHLYLQNSPHQALLHYKLFLASH-AKPDSYTYPILLQCCAARVSEFEGRQLHA 129
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDE------------------------ 102
H + GF V+V + L+++YA G + A+R F+E
Sbjct: 130 HAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEE 189
Query: 103 -------LPEKNIVMYNTMITGLLRRGLVEESRRLFRGMK--DKDSISWTTMITGLMQNG 153
+PE+N + N+MI R+G VE++RR+F G++ ++D +SW+ M++ QN
Sbjct: 190 AERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNE 249
Query: 154 LEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGS 213
+ EA+ LF EM+ G+A+D+ S L+AC +L +E G+ +H ++ +D V + +
Sbjct: 250 MGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKN 309
Query: 214 ALVDMYC--------------------------------KCKSIKYAESVFRTMAWKNVV 241
AL+ +Y +C SI+ AE +F +M K+VV
Sbjct: 310 ALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVV 369
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW+AM+ GY Q+ C EA+ +F MQ +G+ PD+ L S IS+C +LA+L+ G H
Sbjct: 370 SWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYI 429
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
L + +S L+ Y KCG +E++ +F M + +W A++ G A G +++
Sbjct: 430 SRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSL 489
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
++F M G P+E+T +GVL AC GLV GRHYF M+ E+ I HY CM+D+
Sbjct: 490 NMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDL 549
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
L RAG L+EA+ I+ MP PD W LL +CR H + E+G+ L++L P + +
Sbjct: 550 LGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFH 609
Query: 482 VLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIY 541
VLLS+IYASKG W +V ++R M + GV K PGCS I+ VH F A D + P + I
Sbjct: 610 VLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAGDKTHPQINDIE 669
Query: 542 AELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVV 601
L+ + K+ EGYVP S V D++ EK L HSEKLA+AFGL+ I P PIRV
Sbjct: 670 HMLDVVAAKLKIEGYVPTTSEVSLDIDEEEKETALFRHSEKLAVAFGLITISPPTPIRVT 729
Query: 602 KNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLR+C+DCH K ISK R+I+VRD RFH FK+G CSC DFW
Sbjct: 730 KNLRICNDCHTVVKLISKAFDRDIVVRDRHRFHHFKHGACSCMDFW 775
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 206/374 (55%), Gaps = 6/374 (1%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW+ ++S + + +A+ ++ M G+ + S + S V++GR +
Sbjct: 234 DMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLN-VEMGRWV 292
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEK-NIVMYNTMITGLLRRGL 123
HG +K G YV + + L+ +Y+ G I DA+R FD+ E +++ +N+MI+G LR G
Sbjct: 293 HGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGS 352
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
++++ LF M +KD +SW+ MI+G Q+ EA+ LF+EM+L G+ D+ S ++A
Sbjct: 353 IQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISA 412
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C L L+ GK IHA+I RN + NV + + L+DMY KC ++ A VF M K V +W
Sbjct: 413 CTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTW 472
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
A+++G NG E+++ +F +M++ G P++ T V+ +C ++ + +G + +
Sbjct: 473 NAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIH 532
Query: 304 TGLI-SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV-SWTALVSGYAKFGKANETI 361
I + I +V G+ G ++++ L + M + +V +W AL+ G + + NE
Sbjct: 533 EHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALL-GACRKHRDNEMG 591
Query: 362 DLFEKMLSHGLKPD 375
+ + L L+PD
Sbjct: 592 ERLGRKLIQ-LQPD 604
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 113/250 (45%), Gaps = 36/250 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSW+ +ISG+A H ++A+ ++ M G+ + + + +DL
Sbjct: 363 MPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGV-RPDETALVSAISACTHLATLDL 421
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ IH +I + V + + L+DMY K G + +A F + EK + +N +I GL
Sbjct: 422 GKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAM 481
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G VE+S +++F +M+ G ++ TF V
Sbjct: 482 NGSVEQS-------------------------------LNMFADMKKTGTVPNEITFMGV 510
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHK--DNVFVGSALVDMYCKCKSIKYAESVFRTMAW- 237
L AC + + +G+ +I ++HK N+ +VD+ + +K AE + +M
Sbjct: 511 LGACRHMGLVNDGRHYFNSMI-HEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMA 569
Query: 238 KNVVSWTAML 247
+V +W A+L
Sbjct: 570 PDVATWGALL 579
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 110/249 (44%), Gaps = 23/249 (9%)
Query: 227 YAESVFRTMAWKNVVSWTAMLVG--YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
Y+ +F + N +W ++ Y QN +A+ + + +PD +T ++
Sbjct: 56 YSLRIFNHLRNPNTFTWNTIMRAHLYLQNS-PHQALLHYKLFLASHAKPDSYTYPILLQC 114
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
CA S EG Q H ++ +G + V N L+ Y CG++ + R+F E V D VSW
Sbjct: 115 CAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSW 174
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLI--GVLSACSRAGLVEKGRHYFEIM 402
L++GY + G+ E +FE M P+ T+ +++ R G VEK R F
Sbjct: 175 NTLLAGYVQAGEVEEAERVFEGM------PERNTIASNSMIALFGRKGCVEKARRIFN-- 226
Query: 403 VKEYGIRPIHD---HYTCMIDILSRAGRLEEAKSFINKMP---FPPDAIGWATLLSSCRI 456
G+R ++ M+ + EEA +M D + + LS+C
Sbjct: 227 ----GVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSR 282
Query: 457 HGNVEIGKW 465
NVE+G+W
Sbjct: 283 VLNVEMGRW 291
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 246/653 (37%), Positives = 378/653 (57%), Gaps = 42/653 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D SWN LI+ A G ++++ ++ M K + +R TF + S+ ++ G+Q
Sbjct: 46 DVYSWNSLIAELARGGDSCESLRAFSWMRKLDI-KPNRSTFPCAIKSCSALFDLNSGKQA 104
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H L FGF S +FV S L+DMY+K G + +A+ FDE+P +NIV + ++ITG +
Sbjct: 105 HQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYV----- 159
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE---------GLAMDQF 175
QN EA+ +F+E E G ++D
Sbjct: 160 --------------------------QNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSV 193
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
SVL+AC + + +H I+ + V + L+D Y KC + + VF M
Sbjct: 194 AMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDM 253
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEG 294
A K+VVSW +M+ Y QNG S +A ++F M + G + ++ TL +++ +CA+ +L G
Sbjct: 254 AEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVG 313
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
H + + G ++ + ++ +++ Y KCG E + F+ M ++ SWTA+++GY
Sbjct: 314 MCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMH 373
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G A E +D+F +M+ G+KP+ +T I VL+ACS AG +E+G +F M EY + P +H
Sbjct: 374 GFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEH 433
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
Y CM+D+L RAG ++EA + I M D + W +LL++CRIH +VE+ + +A L +LD
Sbjct: 434 YGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLD 493
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS 534
P N YVLL++IYA G+W V ++R ++++G+ K PG S ++ K RVH+F D
Sbjct: 494 PSNCGYYVLLANIYADAGRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEH 553
Query: 535 PYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPP 594
P ++IY LE+L+ K+ + GYVP+M+SVLHDV+ EK ++ HSEKLA+AFG++ P
Sbjct: 554 PQHEKIYKYLEELSVKLQEAGYVPNMASVLHDVDEEEKEMIVRVHSEKLAVAFGVMNSIP 613
Query: 595 GLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G I V+KNLRVC DCH K ISKI REI+VRDA RFH FK+G CSCGD+W
Sbjct: 614 GSTIHVIKNLRVCGDCHTVIKLISKIVSREIIVRDAKRFHHFKDGLCSCGDYW 666
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 206/425 (48%), Gaps = 51/425 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLML---KDGLGNLSRITFSTMLIMSSSRRC 57
+P + V+W LI+G+ + ++A+ V+ L +G G + ++ ++S C
Sbjct: 143 IPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSAC 202
Query: 58 VDLGRQ-----IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYN 112
+ + +HG +K G + V + L+D YAK G + +++ FD++ EK++V +N
Sbjct: 203 SRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWN 262
Query: 113 TMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM 172
+MI + GL ++ +F GM ++ G
Sbjct: 263 SMIAVYAQNGLSTDAFEVFHGM------------------------------LKAGGGKY 292
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
++ T ++L AC AL G +H +I+ + +NV + ++++DMYCKC + A + F
Sbjct: 293 NEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAF 352
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
M KNV SWTAM+ GYG +G + EA+ +F M G++P+ T SV+++C++ LE
Sbjct: 353 DGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLE 412
Query: 293 EGTQ-FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALVSG 350
EG + F+ S + + +V G+ G I++++ L M V RD V W +L++
Sbjct: 413 EGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAA 472
Query: 351 YAKFGKANETIDLFEKMLSHGLKPDE----VTLIGVLSACSRAGLVEKGRHYFEIMVKEY 406
+ K E ++ + L L P V L + + R VE+ R I+VK+
Sbjct: 473 -CRIHKDVELAEISAREL-FKLDPSNCGYYVLLANIYADAGRWKDVERMR----ILVKDR 526
Query: 407 G-IRP 410
G ++P
Sbjct: 527 GLVKP 531
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 242/615 (39%), Positives = 346/615 (56%), Gaps = 39/615 (6%)
Query: 72 GFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLF 131
G FV S L+ Y + G DA+ D +P + +V ++ +I G E + L
Sbjct: 50 GVSRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLL 109
Query: 132 RGMK----DKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
M+ + + I+W +++GL ++G R+A+ M EG D L+A G +
Sbjct: 110 ERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDV 169
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC------------------------- 222
+ G+Q+H ++++ + + V +AL+DMY KC
Sbjct: 170 GDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALV 229
Query: 223 ------KSIKYAESVFRTMAWK----NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE 272
+ A +FR + NVVSWT+++ QNG EAV +F MQ GIE
Sbjct: 230 AGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIE 289
Query: 273 PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRL 332
P+ T+ V+ + AN+A+L G H SL G I V +ALV Y KCG + D+ +
Sbjct: 290 PNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMI 349
Query: 333 FNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLV 392
F M R+ VSW A++ GYA G+A + LF M S KPD VT VL ACS+AG
Sbjct: 350 FEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWT 409
Query: 393 EKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
E+GR YF M ++GI P +HY CM+ +L RAG+L++A IN+MPF PD W +LL
Sbjct: 410 EEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLG 469
Query: 453 SCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKD 512
SCR+HGNV + + AAE+L +L+P N +YVLLS+IYASK WD V++LR M+ G++K+
Sbjct: 470 SCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVGLKKE 529
Query: 513 PGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEK 572
GCSWI+ K++VH+ A D S P I +L+ L +M + G+ P VLHDVE EK
Sbjct: 530 KGCSWIEIKNKVHMLLAGDSSHPMMAAITEKLKHLTMEMRRLGFAPSTDYVLHDVEEQEK 589
Query: 573 IKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVR 632
+L+ HSEKLA+A GL+ G P++V+KNLR+C DCH A K+IS +REI VRD R
Sbjct: 590 DDILSVHSEKLAVALGLISTSHGTPLQVIKNLRICGDCHEAMKFISSFERREIYVRDTNR 649
Query: 633 FHLFKNGECSCGDFW 647
FH FK+G+CSC D+W
Sbjct: 650 FHHFKDGKCSCADYW 664
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 123/388 (31%), Positives = 191/388 (49%), Gaps = 40/388 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLG---------------------- 38
MP V W+ LI+ HASHG A + M DG+
Sbjct: 81 MPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLVSGLNRSGRARDA 140
Query: 39 --NLSRITFSTMLIMSSSRRC----------VDLGRQIHGHILKFGFGSYVFVGSPLVDM 86
L R+ L ++ C V +G Q+HG+++K G V + L+DM
Sbjct: 141 VLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDM 200
Query: 87 YAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDK----DSISW 142
Y K G + R FDE ++ N ++ GL R V E+ RLFR + + +SW
Sbjct: 201 YGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSW 260
Query: 143 TTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIR 202
T+++ +QNG + EA+DLFREM+ EG+ + T VL A + AL G+ H F +R
Sbjct: 261 TSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLR 320
Query: 203 NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKI 262
+++VGSALVDMY KC ++ A +F M ++NVVSW AM+ GY +G +E AV++
Sbjct: 321 KGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRL 380
Query: 263 FCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQFHGRSLVTGLISFITVSNALVTFYG 321
F +MQ + +PD T V+ +C+ EEG + F+ G+ + +VT G
Sbjct: 381 FRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLG 440
Query: 322 KCGNIEDSHRLFNEMNVR-DEVSWTALV 348
+ G ++D++ + N+M D W +L+
Sbjct: 441 RAGKLDDAYDIINQMPFEPDGCIWGSLL 468
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 6/135 (4%)
Query: 273 PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRL 332
PD L S + SC+ L + V G+ V+++L+ Y + G D+ +
Sbjct: 21 PDPRLLPSALKSCSALRLARALHAA---AAVAGVSRDAFVASSLLHAYLRFGATADARSV 77
Query: 333 FNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLV 392
+ M R V W+AL++ +A G A L E+M S G++P+ +T G++S +R+G
Sbjct: 78 LDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLVSGLNRSG-- 135
Query: 393 EKGRHYFEIMVKEYG 407
+ R +V+ +G
Sbjct: 136 -RARDAVLALVRMHG 149
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 249/659 (37%), Positives = 375/659 (56%), Gaps = 43/659 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVK-VYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
MP D V+WN +++G+A HG + AV + ++ ++ + T +L + + + +
Sbjct: 186 MPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALA 245
Query: 60 LGRQIHGHILKFGFGSY----------VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIV 109
G +H + ++ S V +G+ L+DMYAK G + A+R FD +P
Sbjct: 246 QGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPA---- 301
Query: 110 MYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG 169
++ ++W+ +I G + +A LF+ M +G
Sbjct: 302 ---------------------------RNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQG 334
Query: 170 LA-MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYA 228
L + + S L AC L L G+Q+HA + ++ ++ G++L+ MY K I A
Sbjct: 335 LCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQA 394
Query: 229 ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL 288
++F MA K+ VS++A++ GY QNG +EEA +F MQ +EPD T+ S+I +C++L
Sbjct: 395 IALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHL 454
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
A+L+ G HG ++ GL S ++ NAL+ Y KCG I+ S ++FN M RD VSW ++
Sbjct: 455 AALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMI 514
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
+GY G E LF +M + G PD VT I +LSACS +GLV +G+H+F +M YG+
Sbjct: 515 AGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGL 574
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
P +HY CM+D+LSR G L+EA FI MP D W LL +CR++ N+++GK +
Sbjct: 575 TPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSR 634
Query: 469 SLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFS 528
+ EL P ++VLLS+IY++ G++D +++R + +G +K PGCSWI+ +H F
Sbjct: 635 MIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFV 694
Query: 529 ADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFG 588
D S P S +IY EL+ + + K GY PD S VL D+E EK K L HSEKLAIA+G
Sbjct: 695 GGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYG 754
Query: 589 LLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+L + I V KNLRVC DCH K+IS + +R I+VRDA RFH FKNG+CSCGDFW
Sbjct: 755 ILSLSEDKTIFVTKNLRVCGDCHTVIKHISLLKRRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 144/523 (27%), Positives = 250/523 (47%), Gaps = 64/523 (12%)
Query: 1 MPFHDGVSWNLLISGHASHG--SVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCV 58
+P D ++N LI ++S + D + +Y ML+ + + TF L S+
Sbjct: 83 IPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAP-NNYTFPFALKACSALADH 141
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
GR IH H + G + +FV + L+DMY K + DA F +P +++V +N M+ G
Sbjct: 142 HCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGY 201
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
G+ + M +M++ L + T
Sbjct: 202 AHHGMYHHAVAHLLSM-----------------------------QMQMHRLRPNASTLV 232
Query: 179 SVLTACGGLLALEEGKQIHAFIIR----------NDHKDNVFVGSALVDMYCKCKSIKYA 228
++L AL +G +HA+ IR + D V +G+AL+DMY KC S+ YA
Sbjct: 233 ALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYA 292
Query: 229 ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG---IEPDDFTLGSVISSC 285
VF M +N V+W+A++ G+ +A +F M G + P ++ S + +C
Sbjct: 293 RRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRAC 350
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
A+L L G Q H +G+ + +T N+L++ Y K G I+ + LF+EM V+D VS++
Sbjct: 351 ASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYS 410
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR-HYFEIMVK 404
ALVSGY + G+A E +F+KM + ++PD T++ ++ ACS ++ GR + ++++
Sbjct: 411 ALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR 470
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
G+ +ID+ ++ GR++ ++ N MP D + W T+++ IHG +GK
Sbjct: 471 --GLASETSICNALIDMYAKCGRIDLSRQVFNMMP-SRDIVSWNTMIAGYGIHG---LGK 524
Query: 465 WAAESLLELD----PYNPASYVLLSSIYASKG------KWDHV 497
A LE++ P + +++ L S + G W HV
Sbjct: 525 EATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHV 567
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 174/384 (45%), Gaps = 44/384 (11%)
Query: 91 GLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLM 150
G + A FD++P ++ YN +I + S S T GL
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLI-------------------RAYSSSSPTAAADGL- 110
Query: 151 QNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVF 210
L+R M +A + +TF L AC L G+ IH I + ++F
Sbjct: 111 ---------HLYRRMLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLF 161
Query: 211 VGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVK--IFCNMQR 268
V +AL+DMY KC + A +F TM +++V+W AML GY +G AV + MQ
Sbjct: 162 VSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQM 221
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFHG----------RSLVTGLISFITVSNALVT 318
+ + P+ TL +++ A +L +GT H R+ + L + + AL+
Sbjct: 222 HRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLD 281
Query: 319 FYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLK-PDEV 377
Y KCG++ + R+F+ M R+EV+W+AL+ G+ + + LF+ ML+ GL
Sbjct: 282 MYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT 341
Query: 378 TLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINK 437
++ L AC+ + G ++ K G+ ++ + ++AG +++A + ++
Sbjct: 342 SIASALRACASLDHLRMGEQLHALLAKS-GVHADLTAGNSLLSMYAKAGLIDQAIALFDE 400
Query: 438 MPFPPDAIGWATLLSSCRIHGNVE 461
M D + ++ L+S +G E
Sbjct: 401 MAV-KDTVSYSALVSGYVQNGRAE 423
>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/585 (40%), Positives = 351/585 (60%), Gaps = 38/585 (6%)
Query: 97 KRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLER 156
K GFD K+ ++ NT++ + GL+ ++ +LF M ++D +SW +++T + + R
Sbjct: 31 KAGFD----KSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKALIPR 86
Query: 157 EAIDLFREMRL-EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSAL 215
+ + M +GL D F F ++ AC L L GKQ+HA + + D+ V S+L
Sbjct: 87 RTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVKSSL 146
Query: 216 VDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCN---------- 265
+DMY KC A +VF ++ +KN VSWT+M+ GY ++G EA+ +F
Sbjct: 147 IDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWT 206
Query: 266 ---------------------MQRNGIE-PDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
M+R GI+ D L SV+ CANLA LE G Q HG +
Sbjct: 207 ALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIA 266
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
G S + +SNALV Y KC +I + +F M +D +SWT+++ G A+ GKA E + L
Sbjct: 267 LGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTL 326
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
+++M+ +KP+EVT +G+L ACS AGLV +GR F M +Y I P HYTC++D+LS
Sbjct: 327 YDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLS 386
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
R+G L+EA++ ++K+PF PD WA+LLS+C H N+E+G A+ +L+L P +P++Y+L
Sbjct: 387 RSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYIL 446
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSA-DDWSSPYSDQIYA 542
LS++YA W VS++R+ M VRK+PG S I + +F A + P ++I
Sbjct: 447 LSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHPMKNEICN 506
Query: 543 ELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVK 602
L+ L+ +M K GYVP+ S VL+D+E EK K L HSE+LA+A+GLL PG IR+VK
Sbjct: 507 LLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWHSERLAVAYGLLKAVPGTIIRIVK 566
Query: 603 NLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
NLR+C DCHN K+IS I +REI+VRDA R+H FK G+CSC DFW
Sbjct: 567 NLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEGKCSCNDFW 611
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 164/394 (41%), Gaps = 88/394 (22%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P + SW LISG G + ++N M ++G+ + + S+++ ++ ++LG
Sbjct: 198 PVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELG 257
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+QIHG ++ GF S +F+ + LVDMYAK I AK F +P K+++ + ++I G
Sbjct: 258 KQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVG---- 313
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
Q+G EA+ L+ EM L + ++ TF +L
Sbjct: 314 ---------------------------TAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLL 346
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
AC + G+++ FR+M +
Sbjct: 347 YACSHAGLVSRGREL-----------------------------------FRSMTTDYSI 371
Query: 242 S-----WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
+ +T +L ++G +EA + + + +PD+ T S++S+C +LE G +
Sbjct: 372 NPSLQHYTCLLDLLSRSGHLDEAENL---LDKIPFKPDEPTWASLLSACMRHNNLEMGVR 428
Query: 297 FHGRSL---VTGLISFITVSNALVTFYGK--CGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
R L ++I +SN + G G++ +L + M VR E ++++
Sbjct: 429 IADRVLDLKPEDPSTYILLSN---VYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSI---- 481
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
FGK ++ E H +K + L+ L A
Sbjct: 482 -DFGKDSQVFHAGES-CDHPMKNEICNLLKDLDA 513
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 64/132 (48%), Gaps = 3/132 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D +SW +I G A HG +A+ +Y+ M+ + + +TF +L S V
Sbjct: 299 MPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKP-NEVTFVGLLYACSHAGLVSR 357
Query: 61 GRQI-HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEK-NIVMYNTMITGL 118
GR++ + + + L+D+ ++ G + +A+ D++P K + + ++++
Sbjct: 358 GRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSAC 417
Query: 119 LRRGLVEESRRL 130
+R +E R+
Sbjct: 418 MRHNNLEMGVRI 429
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 250/660 (37%), Positives = 375/660 (56%), Gaps = 45/660 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVK-VYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
MP D V+WN +++G+A HG + AV + ++ ++ + T +L + + + +
Sbjct: 71 MPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALA 130
Query: 60 LGRQIHGHIL----------KFGFGSYVFVGSPLVDMYAKLG-LIYDAKRGFDELPEKNI 108
G +H + + K V +G+ L+DMYAK G L+Y
Sbjct: 131 QGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLY-------------- 176
Query: 109 VMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE 168
+RR+F M ++ ++W+ +I G + +A LF+ M +
Sbjct: 177 ------------------ARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQ 218
Query: 169 GLA-MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY 227
GL + + S L AC L L G+Q+HA + ++ ++ G++L+ MY K I
Sbjct: 219 GLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQ 278
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN 287
A ++F MA K+ VS++A++ GY QNG +EEA +F MQ +EPD T+ S+I +C++
Sbjct: 279 AIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSH 338
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
LA+L+ G HG ++ GL S ++ NAL+ Y KCG I+ S ++FN M RD VSW +
Sbjct: 339 LAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTM 398
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYG 407
++GY G E LF +M + G PD VT I +LSACS +GLV +G+H+F +M YG
Sbjct: 399 IAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYG 458
Query: 408 IRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAA 467
+ P +HY CM+D+LSR G L+EA FI MP D W LL +CR++ N+++GK +
Sbjct: 459 LTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVS 518
Query: 468 ESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF 527
+ EL P ++VLLS+IY++ G++D +++R + +G +K PGCSWI+ +H F
Sbjct: 519 RMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAF 578
Query: 528 SADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAF 587
D S P S +IY EL+ + + K GY PD S VL D+E EK K L HSEKLAIA+
Sbjct: 579 VGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAY 638
Query: 588 GLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G+L + I V KNLRVC DCH K+IS + +R I+VRDA RFH FKNG+CSCGDFW
Sbjct: 639 GILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 698
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 130/461 (28%), Positives = 224/461 (48%), Gaps = 61/461 (13%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR IH H + G + +FV + L+DMY K + DA F +P +++V +N M+ G
Sbjct: 29 GRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAH 88
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G+ + M +M++ L + T ++
Sbjct: 89 HGMYHHAVAHLLSM-----------------------------QMQMHRLRPNASTLVAL 119
Query: 181 LTACGGLLALEEGKQIHAFIIR----------NDHKDNVFVGSALVDMYCKCKSIKYAES 230
L AL +G +HA+ IR + D V +G+AL+DMY KC S+ YA
Sbjct: 120 LPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 179
Query: 231 VFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG---IEPDDFTLGSVISSCAN 287
VF M +N V+W+A++ G+ +A +F M G + P ++ S + +CA+
Sbjct: 180 VFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACAS 237
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
L L G Q H +G+ + +T N+L++ Y K G I+ + LF+EM V+D VS++AL
Sbjct: 238 LDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSAL 297
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR-HYFEIMVKEY 406
VSGY + G+A E +F+KM + ++PD T++ ++ ACS ++ GR + ++++
Sbjct: 298 VSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR-- 355
Query: 407 GIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWA 466
G+ +ID+ ++ GR++ ++ N MP D + W T+++ IHG +GK A
Sbjct: 356 GLASETSICNALIDMYAKCGRIDLSRQVFNMMP-SRDIVSWNTMIAGYGIHG---LGKEA 411
Query: 467 AESLLELD----PYNPASYVLLSSIYASKG------KWDHV 497
LE++ P + +++ L S + G W HV
Sbjct: 412 TALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHV 452
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 150/305 (49%), Gaps = 15/305 (4%)
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
+A + +TF L AC L G+ IH I + ++FV +AL+DMY KC + A
Sbjct: 6 VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVK--IFCNMQRNGIEPDDFTLGSVISSCAN 287
+F TM +++V+W AML GY +G AV + MQ + + P+ TL +++ A
Sbjct: 66 HIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQ 125
Query: 288 LASLEEGTQFHG----------RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN 337
+L +GT H R+ + L + + AL+ Y KCG++ + R+F+ M
Sbjct: 126 QGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMP 185
Query: 338 VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLK-PDEVTLIGVLSACSRAGLVEKGR 396
R+EV+W+AL+ G+ + + LF+ ML+ GL ++ L AC+ + G
Sbjct: 186 ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGE 245
Query: 397 HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRI 456
++ K G+ ++ + ++AG +++A + ++M D + ++ L+S
Sbjct: 246 QLHALLAKS-GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV-KDTVSYSALVSGYVQ 303
Query: 457 HGNVE 461
+G E
Sbjct: 304 NGRAE 308
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 36/271 (13%)
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M R+ + P+++T + +C+ LA G H ++ GL + + VS AL+ Y KC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID--LFEKMLSHGLKPDEVTLIGVL 383
+ D+ +F M RD V+W A+++GYA G + + L +M H L+P+ TL+ +L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 384 SACSRAGLVEKGRHYFEIMVKEYGIRP-IHDHY-------------TCMIDILSRAGRLE 429
++ G + +G V Y IR +H + T ++D+ ++ G L
Sbjct: 121 PLLAQQGALAQG-----TSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLL 175
Query: 430 EAKSFINKMPFPPDAIGWATL-----LSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
A+ + MP + + W+ L L S + A+ L L P + +
Sbjct: 176 YARRVFDAMP-ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTS------I 228
Query: 485 SSIYASKGKWDHV---SQLRRTMREKGVRKD 512
+S + DH+ QL + + GV D
Sbjct: 229 ASALRACASLDHLRMGEQLHALLAKSGVHAD 259
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 250/647 (38%), Positives = 372/647 (57%), Gaps = 37/647 (5%)
Query: 3 FHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGR 62
+ D WN +I ++ + D V++Y M G+ F+ ++ + +D G
Sbjct: 116 YPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGV---HPDGFTFPYVLKACTELLDFGL 172
Query: 63 Q--IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
IHG I+K+GFGS VFV + LV +YAK G I AK FD L + IV
Sbjct: 173 SCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIV----------- 221
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SWT++I+G QNG EA+ +F +MR G+ D S+
Sbjct: 222 --------------------SWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSI 261
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A + LE+G+ IH F+I+ +D + +L Y KC + A+S F M NV
Sbjct: 262 LRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNV 321
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+ W AM+ GY +NG +EEAV +F M I+PD T+ S + + A + SLE
Sbjct: 322 IMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDY 381
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ S I V+ +L+ Y KCG++E + R+F+ + +D V W+A++ GY G+ E
Sbjct: 382 VSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEA 441
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
I+L+ M G+ P++VT IG+L+AC+ +GLV++G F M K++ I P ++HY+C++D
Sbjct: 442 INLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCM-KDFEIVPRNEHYSCVVD 500
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG L EA +FI K+P P W LLS+C+I+ V +G++AA L LDPYN
Sbjct: 501 LLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGH 560
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YV LS++YAS WD V+ +R MREKG+ KD G S I+ ++ F D S P + +I
Sbjct: 561 YVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEI 620
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
+ EL++L R++ + G+VP SVLHD+ EK + L+ HSE++A+A+GL+ PG +R+
Sbjct: 621 FDELQRLERRLKEVGFVPYTESVLHDLNYEEKEENLSFHSERIAVAYGLISTAPGTTLRI 680
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLR C +CH+A K ISK+ +REI+VRDA RFH FK+G CSCGD+W
Sbjct: 681 TKNLRACVNCHSAIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/416 (29%), Positives = 209/416 (50%), Gaps = 38/416 (9%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
+++++ S+ +R +D QIH ++ G F+ + LV+ + LG I A++ FDE
Sbjct: 59 YASLIDNSTHKRHLD---QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFC 115
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
++ M W +I +N + R+ ++++R
Sbjct: 116 YPDVFM-------------------------------WNAIIRSYSRNNMYRDTVEMYRW 144
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
MR G+ D FTF VL AC LL IH II+ +VFV + LV +Y KC
Sbjct: 145 MRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGH 204
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
I A+ VF + + +VSWT+++ GY QNG + EA+++F M+ NG++PD L S++ +
Sbjct: 205 IGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRA 264
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
++ LE+G HG + GL + +L FY KCG + + F++M + + W
Sbjct: 265 YTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMW 324
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
A++SGYAK G A E ++LF M+S +KPD VT+ + A ++ G +E + + + K
Sbjct: 325 NAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSK 384
Query: 405 -EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
YG + T +ID+ ++ G +E A+ ++ D + W+ ++ +HG
Sbjct: 385 SNYGSDIFVN--TSLIDMYAKCGSVEFARRVFDRNS-DKDVVMWSAMIMGYGLHGQ 437
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 137/267 (51%), Gaps = 2/267 (0%)
Query: 195 QIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNG 254
QIH ++ + + N F+ + LV+ I YA +F + +V W A++ Y +N
Sbjct: 74 QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNN 133
Query: 255 CSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSN 314
+ V+++ M+ G+ PD FT V+ +C L HG+ + G S + V N
Sbjct: 134 MYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQN 193
Query: 315 ALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKP 374
LV Y KCG+I + +F+ + R VSWT+++SGYA+ GKA E + +F +M ++G+KP
Sbjct: 194 GLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKP 253
Query: 375 DEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSF 434
D + L+ +L A + +E+GR ++K G+ + ++ G + AKSF
Sbjct: 254 DWIALVSILRAYTDVDDLEQGRSIHGFVIK-MGLEDEPALLISLTAFYAKCGLVTVAKSF 312
Query: 435 INKMPFPPDAIGWATLLSSCRIHGNVE 461
++M + I W ++S +G+ E
Sbjct: 313 FDQMK-TTNVIMWNAMISGYAKNGHAE 338
>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
Length = 610
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/570 (41%), Positives = 349/570 (61%), Gaps = 13/570 (2%)
Query: 83 LVDMYAKL-GLI--YDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDS 139
L+ YAK GLI DA+R FD +P + V YNT+++ G ++ +RR+F M KD
Sbjct: 49 LLAGYAKASGLIRLADARRLFDSIPHPDTVSYNTLLSCHFACGDIDGARRVFSTMPVKDV 108
Query: 140 ISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAF 199
SW TM++GL +NG EA +FR M + A+ + L G + A E+
Sbjct: 109 TSWNTMVSGLSKNGASEEAAAMFRIMPVRN-AVSWNAMVAALACSGDMGAAED------- 160
Query: 200 IIRN-DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEE 258
+ RN K + + +A+V Y +++ A F M +N+VSW A++ GY +N +++
Sbjct: 161 LFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVKNSRADD 220
Query: 259 AVKIFCNMQRNGI-EPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALV 317
A+++F M + I +P+ TL SV+ C+NL++L G Q H + L +TV +L+
Sbjct: 221 ALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLL 280
Query: 318 TFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEV 377
+ Y KCG++ D+ ++F+EM+ +D V+W A++SGYA+ G + I LFEKM G+ PD +
Sbjct: 281 SMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWI 340
Query: 378 TLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINK 437
TL+ VL+AC GL + G FE M + Y I P DHY+CM+D+L RAG LE A + I+
Sbjct: 341 TLLAVLTACIHTGLCDFGIQCFETMQEAYKIEPQIDHYSCMVDLLCRAGLLERAVNMIHS 400
Query: 438 MPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHV 497
MPF P + TLL++CR++ N+E ++AA L+E DP N +YV L++IYA KW V
Sbjct: 401 MPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANIYAVANKWADV 460
Query: 498 SQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYV 557
S++RR M++ V K PG SW++ K H F ++D P I+ +L++L M GYV
Sbjct: 461 SRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLGLIHDKLDRLQMLMKAMGYV 520
Query: 558 PDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYI 617
PD+ LHDVE S K +ML HSEKLAIAFGL+ PG+ +R+ KNLR+C DCHNA K I
Sbjct: 521 PDLDFALHDVEDSLKSQMLMRHSEKLAIAFGLISTSPGMTLRIFKNLRICGDCHNAAKLI 580
Query: 618 SKITQREILVRDAVRFHLFKNGECSCGDFW 647
SKI REI++RD RFH F+ G CSCGD+W
Sbjct: 581 SKIEDREIILRDTTRFHHFRGGHCSCGDYW 610
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 94/170 (55%), Gaps = 4/170 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSWN +++G+ + +DA++V+ M++D + + T S++L+ S+ +
Sbjct: 197 MPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGF 256
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H +K V VG+ L+ MY K G + DA + FDE+ K+IV +N MI+G +
Sbjct: 257 GRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGYAQ 316
Query: 121 RGLVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMR 166
G ++ +LF MKD+ D I+ ++T + GL I F M+
Sbjct: 317 HGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQ 366
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 249/678 (36%), Positives = 376/678 (55%), Gaps = 63/678 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + WN +I G++ G N AV +Y ML+ G+ T+ +L + V
Sbjct: 79 MPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMP-DEYTYPFLLKRFTRDTAVKC 137
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR++H HI+K GF S VFV + L+ +Y+ G + A+ FD
Sbjct: 138 GRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFD------------------- 178
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
R +G D ++W MI+G ++ E++ LF EM + T SV
Sbjct: 179 --------RSSKG----DVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSV 226
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+AC L L GK++H ++ + + +AL+DMY C + A +F M ++V
Sbjct: 227 LSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDV 286
Query: 241 VSWTAMLVGY---GQNGCS----------------------------EEAVKIFCNMQRN 269
+SWTA++ G+ GQ G + +E + +F MQ
Sbjct: 287 ISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAA 346
Query: 270 GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
I+PD+FT+ S++++CA+L +LE G + V NAL+ Y CGN+E +
Sbjct: 347 NIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKA 406
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
R+FN M RD++SWTA++ G A G E +D+F +ML + PDEVT IGVL AC+ +
Sbjct: 407 IRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHS 466
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
G+V+KG+ +F M ++GI P HY CM+D+L RAG L+EA I MP P++I W +
Sbjct: 467 GMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGS 526
Query: 450 LLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
LL +CR+H + E+ + AA+ +LEL+P N A YVLL +IYA+ +W+ + ++R+ M ++G+
Sbjct: 527 LLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGI 586
Query: 510 RKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVEL 569
+K PGCS I+ VH F A D P S +IY++L++++ + GY PD S V D+
Sbjct: 587 KKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGE 646
Query: 570 SEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRD 629
EK + HSEKLAIAFGL+ PG+ IR+VKNLR+C DCH K +SK+ RE++VRD
Sbjct: 647 EEKESAVYRHSEKLAIAFGLISSGPGVTIRIVKNLRMCVDCHYVAKLVSKVYNREVIVRD 706
Query: 630 AVRFHLFKNGECSCGDFW 647
RFH F++G CSC D+W
Sbjct: 707 RTRFHHFRHGSCSCKDYW 724
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 175/368 (47%), Gaps = 33/368 (8%)
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G +E +R +F M + W MI G + G A+ ++ EM G+ D++T+ +L
Sbjct: 67 GDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLL 126
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
A++ G+++H I++ NVFV +AL+ +Y + A VF + +VV
Sbjct: 127 KRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVV 186
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
+W M+ GY ++ +E++K+F M+R + P TL SV+S+C+ L L G + H
Sbjct: 187 TWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYV 246
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA---- 357
+ + NAL+ Y CG+++ + +F+ M RD +SWTA+V+G+ G+
Sbjct: 247 KDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLAR 306
Query: 358 ---------------------------NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
E + LF +M + +KPDE T++ +L+AC+ G
Sbjct: 307 NYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLG 366
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATL 450
+E G + + + + I+ +ID+ G +E+A N MP D I W +
Sbjct: 367 ALELGE-WIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPH-RDKISWTAV 424
Query: 451 LSSCRIHG 458
+ I+G
Sbjct: 425 IFGLAING 432
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 156/336 (46%), Gaps = 10/336 (2%)
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK--SIKYAESVFRTMA 236
S++ C + L KQIH+ I N V + ++ CK + ++YA VF TM
Sbjct: 24 SLIKTCKSMAQL---KQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMP 80
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
N W M+ GY + GC AV ++C M G+ PD++T ++ +++ G +
Sbjct: 81 GPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRE 140
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H + G S + V NAL+ Y G + + +F+ + D V+W ++SGY + +
Sbjct: 141 LHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQ 200
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
+E++ LF++M + P +TL+ VLSACS+ + G+ VK+ I P+
Sbjct: 201 FDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHR-YVKDLKIEPVRVLEN 259
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY 476
+ID+ + G ++ A + M D I W +++ G V + + + + E D
Sbjct: 260 ALIDMYAACGDMDTALGIFDNMK-SRDVISWTAIVTGFTNLGQVGLARNYFDKMPERD-- 316
Query: 477 NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKD 512
S+ + Y ++ V L R M+ ++ D
Sbjct: 317 -FVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPD 351
>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
Length = 605
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/570 (41%), Positives = 348/570 (61%), Gaps = 13/570 (2%)
Query: 83 LVDMYAKL---GLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDS 139
L+ YAK G + DA+R FD +P + V YNT+++ G ++ + R+F M +D
Sbjct: 44 LLAGYAKASGPGRLADARRLFDSIPHPDAVSYNTLLSCHFACGDIDGAWRVFSTMPVRDV 103
Query: 140 ISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAF 199
SW TM++GL +NG EA +FR M A+ + + G + A E
Sbjct: 104 TSWNTMVSGLSKNGAIEEAEAMFRAMPARN-AVSWNAMVAARASSGDMGAAEN------- 155
Query: 200 IIRN-DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEE 258
+ RN K + + +A+V Y +++ A FR M +N+VSW A++ GY +N + +
Sbjct: 156 LFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGD 215
Query: 259 AVKIFCNMQRNGI-EPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALV 317
A+++F M + I +P+ TL SV+ C+NL++L G Q H + L ITV +L+
Sbjct: 216 ALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGTSLL 275
Query: 318 TFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEV 377
+ Y KCG+++D+ +LF+EM+ +D V+W A++SGYA+ G + I LFEKM G+ PD +
Sbjct: 276 SMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWI 335
Query: 378 TLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINK 437
TL+ VL+AC GL + G FE M + Y I P DHY+CM+D+L RAG LE A + I+
Sbjct: 336 TLLAVLTACIHTGLCDFGIQCFETMQEAYNIEPQVDHYSCMVDLLCRAGLLERAVNMIHS 395
Query: 438 MPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHV 497
MPF P + TLL++CR++ N+E ++AA L+E DP N +YV L++IYA +WD V
Sbjct: 396 MPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANIYAVANRWDDV 455
Query: 498 SQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYV 557
S++RR M++ V K PG SW++ K H F ++D P D I+ +L++L + M GY
Sbjct: 456 SRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLDLIHDKLDRLGKLMKAMGYS 515
Query: 558 PDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYI 617
PD+ LHDVE S K +ML HSEKLAIAFGL+ PG+ +R+ KNLR+C DCHNA K I
Sbjct: 516 PDLDFALHDVEESLKSQMLMRHSEKLAIAFGLISTSPGMTLRIFKNLRICGDCHNAAKLI 575
Query: 618 SKITQREILVRDAVRFHLFKNGECSCGDFW 647
SKI REI++RD RFH F+ G CSCGD+W
Sbjct: 576 SKIEDREIILRDTTRFHHFRGGHCSCGDYW 605
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 145/298 (48%), Gaps = 42/298 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SWN ++SG + +G++ +A ++ M +R V
Sbjct: 98 MPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAM--------------------PARNAVSW 137
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEK-NIVMYNTMITGLL 119
+ +V A G + A+ F PEK + +++ M++G +
Sbjct: 138 --------------------NAMVAARASSGDMGAAENLFRNAPEKTDAILWTAMVSGYM 177
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM-DQFTFG 178
G V+++ FR M ++ +SW ++ G ++N +A+ +F+ M + + + T
Sbjct: 178 DTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLS 237
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
SVL C L AL G+Q+H + ++ ++ VG++L+ MYCKC + A +F M K
Sbjct: 238 SVLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTK 297
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
++V+W AM+ GY Q+G +A+K+F M+ G+ PD TL +V+++C + + G Q
Sbjct: 298 DIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQ 355
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 94/170 (55%), Gaps = 4/170 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSWN +++G+ + DA++V+ M++D + + T S++L+ S+ +
Sbjct: 192 MPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGF 251
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H +K G + VG+ L+ MY K G + DA + FDE+ K+IV +N MI+G +
Sbjct: 252 GRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQ 311
Query: 121 RGLVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMR 166
G ++ +LF MKD+ D I+ ++T + GL I F M+
Sbjct: 312 HGGGRKAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQ 361
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 20/181 (11%)
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQN---GCSEEAVKIFCNMQRNGIEPDDFTLGSVIS- 283
AE F + K ++ +L GY + G +A ++F ++ PD + +++S
Sbjct: 26 AEEAFASTQLKTTTTYNCLLAGYAKASGPGRLADARRLFDSIP----HPDAVSYNTLLSC 81
Query: 284 --SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE 341
+C ++ +G R T + +T N +V+ K G IE++ +F M R+
Sbjct: 82 HFACGDI----DGAW---RVFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMPARNA 134
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEI 401
VSW A+V+ A G +LF K D + ++S G V+K YF
Sbjct: 135 VSWNAMVAARASSGDMGAAENLFRNAPE---KTDAILWTAMVSGYMDTGNVQKAMEYFRA 191
Query: 402 M 402
M
Sbjct: 192 M 192
>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Glycine max]
Length = 721
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 248/650 (38%), Positives = 370/650 (56%), Gaps = 43/650 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+PF D VSWN +I G G + A K+++ M RR V
Sbjct: 112 IPFKDVVSWNSIIKGCLHCGDIVTARKLFDEM---------------------PRRTV-- 148
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF--DELPEKNIVMYNTMITGL 118
+ LVD +LG++ +A+ F E ++++ +N MI G
Sbjct: 149 -----------------VSWTTLVDGLLRLGIVQEAETLFWAMEPMDRDVAAWNAMIHGY 191
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
G V+++ +LF M +D ISW++MI GL NG +A+ LFR+M G+ +
Sbjct: 192 CSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVCLSSGVLV 251
Query: 179 SVLTACGGLLALEEGKQIHAFIIR-NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
L+A + A G QIH + + D + FV ++LV Y CK ++ A VF + +
Sbjct: 252 CGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQMEAACRVFGEVVY 311
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
K+VV WTA+L GYG N EA+++F M R + P++ + S ++SC L +E G
Sbjct: 312 KSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVI 371
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H ++ GL S V +LV Y KCG + D+ +F +N ++ VSW +++ G A+ G
Sbjct: 372 HAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQHGCG 431
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
+ LF +ML G+ PD +T+ G+LSACS +G+++K R +F ++ + +HYT
Sbjct: 432 MWALALFNQMLREGVDPDGITVTGLLSACSHSGMLQKARCFFRYFGQKRSVTLTIEHYTS 491
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
M+D+L R G LEEA++ + MP +++ W LLS+CR H N+++ K AA + E++P
Sbjct: 492 MVDVLGRCGELEEAEAVVMSMPMKANSMVWLALLSACRKHSNLDLAKRAANQIFEIEPDC 551
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
A+YVLLS++YAS +W V+ +RR M+ GV K PG SW+ K + H F + D S P +
Sbjct: 552 SAAYVLLSNLYASSSRWAEVALIRRKMKHNGVVKKPGSSWLTLKGQKHKFLSADRSHPLA 611
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
++IY +LE L K+ + GYVPD LHDVE +K +ML++HSE+LAIAFGLL G
Sbjct: 612 EKIYQKLEWLGVKLKELGYVPDQQFALHDVETEQKEEMLSYHSERLAIAFGLLSTVEGSA 671
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
I V+KNLRVC DCHNA K ++KI REI+VRD+ RFH FKNG CSCGD+W
Sbjct: 672 ITVMKNLRVCGDCHNAIKLMAKIVDREIVVRDSSRFHDFKNGICSCGDYW 721
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 194/420 (46%), Gaps = 47/420 (11%)
Query: 48 MLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKN 107
+L + R +D R I I +V + + ++ YA+ + +A F +P K+
Sbjct: 61 LLFHHLNNRSLDEARAIFDQIPT----PHVSLYTIMLHAYAQNHRLREAIDLFRRIPFKD 116
Query: 108 IVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL 167
+V +N++I G L G + +R+LF M + +SWTT++ GL++ G+ +EA LF M
Sbjct: 117 VVSWNSIIKGCLHCGDIVTARKLFDEMPRRTVVSWTTLVDGLLRLGIVQEAETLFWAME- 175
Query: 168 EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY 227
MD+ +V +A++ YC +
Sbjct: 176 ---PMDR---------------------------------DVAAWNAMIHGYCSNGRVDD 199
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN 287
A +F M ++V+SW++M+ G NG SE+A+ +F +M +G+ L +S+ A
Sbjct: 200 ALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVCLSSGVLVCGLSAAAK 259
Query: 288 LASLEEGTQFHGRSLVTGLISFIT-VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTA 346
+ + G Q H G F VS +LVTFY C +E + R+F E+ + V WTA
Sbjct: 260 IPAWRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQMEAACRVFGEVVYKSVVIWTA 319
Query: 347 LVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY 406
L++GY K E +++F +M+ + P+E + L++C +E+G+ VK
Sbjct: 320 LLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVK-M 378
Query: 407 GIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWA 466
G+ ++ + S+ G + +A ++ K + + W +++ C HG G WA
Sbjct: 379 GLESGGYVGGSLVVMYSKCGYVSDA-VYVFKGINEKNVVSWNSVIVGCAQHG---CGMWA 434
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 247/652 (37%), Positives = 380/652 (58%), Gaps = 43/652 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD- 59
MP D +SWN +ISG+ +G + ++++++M + + TM ++S+ +D
Sbjct: 259 MPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDP----DLITMTTVASACELLDN 314
Query: 60 --LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
LGR +HG+++K FG + + + L+ MY+ LG +
Sbjct: 315 ERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRL------------------------ 350
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
EE+ +F M+ KD +SWT MI L+ + L +A++ ++ M LEG+ D+ T
Sbjct: 351 -------EEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITL 403
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
SVL+AC + L+ G ++H I+ +V V ++L+DMY KCK + A VFR ++
Sbjct: 404 VSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISG 463
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
KNVVSWT++++G N S EA+ F M+ + ++P+ TL SV+S+CA + +L G +
Sbjct: 464 KNVVSWTSLILGLRINNRSFEALLFFRQMKES-MKPNSVTLISVLSACARIGALMRGKEI 522
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H +L TG+ + NA++ Y +CG + FN +D +W L++GYA+ G+A
Sbjct: 523 HAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQK-KDVTAWNILLTGYAQQGQA 581
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
++LF+KML + PDE+T I +L ACS++G+V +G YF IM +Y + P HY C
Sbjct: 582 KLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYAC 641
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
++DIL RAG+L++A FI MP PDA W LL++CRIH NVE+G+ AA+ + E D +
Sbjct: 642 VVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKS 701
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
Y+LL ++YA G WD VS++R MRE+G+ DPGCSW++ K +VH F + D S S
Sbjct: 702 VGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQS 761
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
+I L+ KM + G+ SS ++E S + + HSE+ AIAFGL+ PG+P
Sbjct: 762 KEINGVLDGFCSKMKENGFGNLKSSFTSEIE-SSRADIFCGHSERQAIAFGLINTAPGMP 820
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGD--FW 647
I V KNL +C CHN K+IS I +REI VRD +H FK+G CSCGD +W
Sbjct: 821 IWVTKNLYMCHSCHNMVKFISTIVRREISVRDVEEYHHFKDGVCSCGDEGYW 872
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 146/478 (30%), Positives = 244/478 (51%), Gaps = 44/478 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D SWN+L+ G+A G ++A+ +Y+ ML + + TF ++L + +
Sbjct: 158 MSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEI-RPNVYTFPSVLKTCAGVSDIAR 216
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G++IH H+++FGF S V VG+ L+ MY K G I +A
Sbjct: 217 GKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNA------------------------ 252
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
R LF M +D ISW MI+G +NG E ++LF MR + D T +V
Sbjct: 253 -------RMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTV 305
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+AC L G+ +H ++++++ ++ + ++L+ MY ++ AE+VF M K+V
Sbjct: 306 ASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDV 365
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWTAM+ + +AV+ + M+ GI PD+ TL SV+S+CA + L+ G + H
Sbjct: 366 VSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEI 425
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ TGL+S + VSN+L+ Y KC ++++ +F ++ ++ VSWT+L+ G ++ E
Sbjct: 426 AIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEA 485
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR----HYFEIMVKEYGIRPIHDHYT 416
+ LF + + +KP+ VTLI VLSAC+R G + +G+ H V G P
Sbjct: 486 L-LFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLP-----N 539
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
++D+ R GR A + N D W LL+ G ++ + +LEL+
Sbjct: 540 AILDMYVRCGRKVPALNQFNSQ--KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELE 595
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 204/401 (50%), Gaps = 19/401 (4%)
Query: 112 NTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLA 171
N +++ +R G + ++ +F M ++D SW ++ G + G EA++L+ M +
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
+ +TF SVL C G+ + GK+IHA +IR + +V VG+AL+ MY KC I A +
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARML 255
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASL 291
F M ++ +SW AM+ GY +NG E +++F M+ ++PD T+ +V S+C L +
Sbjct: 256 FDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNE 315
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
G HG + + I+++N+L+ Y G +E++ +F+ M +D VSWTA+++
Sbjct: 316 RLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASL 375
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
+ ++ ++ M G+ PDE+TL+ VLSAC+ G ++ G EI +K G+
Sbjct: 376 VSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKT-GLVSH 434
Query: 412 HDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL 471
+ID+ S+ ++ A + + + W +L+ RI+ + E+LL
Sbjct: 435 VIVSNSLIDMYSKCKCVDNALEVFRNIS-GKNVVSWTSLILGLRINNR------SFEALL 487
Query: 472 EL----DPYNPASYVLLSSIYAS-------KGKWDHVSQLR 501
+ P S L+S + A +GK H LR
Sbjct: 488 FFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAHALR 528
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 181/345 (52%), Gaps = 10/345 (2%)
Query: 146 ITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH 205
+ G ++ ++R ++ E+R+E +++ + ++L C A +EG +++ + +
Sbjct: 74 LQGNLEQAMKR--LESMLELRIE---VEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKS 128
Query: 206 KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCN 265
V +G+AL+ M+ + ++ A VF M+ ++V SW ++ GY + GC +EA+ ++
Sbjct: 129 CLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHR 188
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M I P+ +T SV+ +CA ++ + G + H + G S + V NAL+T Y KCG+
Sbjct: 189 MLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGD 248
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
I ++ LF++M RD +SW A++SGY + G E ++LF M + PD +T+ V SA
Sbjct: 249 ISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASA 308
Query: 386 CSRAGLVEKGRHYFEIMVK-EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDA 444
C GR +VK E+G ++ +I + S GRLEEA++ ++M D
Sbjct: 309 CELLDNERLGRGVHGYVVKSEFGGDISMNN--SLIQMYSSLGRLEEAETVFSRME-SKDV 365
Query: 445 IGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYA 489
+ W +++S H + ++EL+ P L+S + A
Sbjct: 366 VSWTAMIASLVSH-KLPFKAVETYKMMELEGILPDEITLVSVLSA 409
>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Cucumis sativus]
Length = 908
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 244/653 (37%), Positives = 380/653 (58%), Gaps = 7/653 (1%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYN-LMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
MP D SWN +IS ++A + + L GL + + ST+L +
Sbjct: 257 MPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGL-KVDHFSLSTLLTACAGSVKPM 315
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G+Q+H LK G S++ V S L+ Y K G D F+ +P ++++ + MIT +
Sbjct: 316 KGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYM 375
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
G+++ + +F M ++ IS+ ++ GL +N A++LF EM EG+ + T S
Sbjct: 376 EFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTS 435
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
++TACG L + + +QI F+++ N + +ALVDMY +C ++ AE +F + +N
Sbjct: 436 IITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLEN 495
Query: 240 --VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQ 296
T+M+ GY +NG EA+ +F + Q G I D+ S++S C ++ E G Q
Sbjct: 496 DYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGKQ 555
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H +L +GLI+ V NA V+ Y KC N++D+ R+FN MN++D VSW LV+G+ +
Sbjct: 556 MHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQ 615
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSAC--SRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
++ + +++KM G+KPD +T ++SA + LV+ R F M E+ I+P +H
Sbjct: 616 GDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHNIKPTLEH 675
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
Y I +L R G LEEA+ I MP PD W LL+SCRI+ N + K AA ++L ++
Sbjct: 676 YASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEKLAARNILAVE 735
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS 534
P +P SY+L S++Y++ G+W + ++R MREKG RK P SWI +++++H F A D S
Sbjct: 736 PKDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWIIHENKIHSFYARDRSH 795
Query: 535 PYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPP 594
P IY+ LE L + +K GYVPD S VL +VE +K + L +HS KLA FG+L P
Sbjct: 796 PQGKDIYSGLEILILECLKVGYVPDTSFVLQEVEERQKKEFLFYHSGKLAATFGILMTKP 855
Query: 595 GLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G PI++VKN+R+C DCHN KY+S +T+R+IL+RD FH F +G+CSC D+W
Sbjct: 856 GKPIQIVKNVRLCGDCHNFLKYVSIVTRRKILLRDTSGFHWFIDGQCSCTDYW 908
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 141/523 (26%), Positives = 246/523 (47%), Gaps = 80/523 (15%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VS+ LISG + ++AV+++ ML G+ + TF +L LG Q+HG
Sbjct: 162 VSYTALISGFSKSDWEDEAVELFFAMLDSGI-EPNEYTFVAILTACIRNMDYQLGSQVHG 220
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++K G S VF+ + L+ +Y K G + R F+E+PE++I +NT+I+ L++ +E
Sbjct: 221 IVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDE 280
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+ FRGM+ +GL +D F+ ++LTAC G
Sbjct: 281 AFDYFRGMQ------------------------------LCKGLKVDHFSLSTLLTACAG 310
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+ +G+Q+HA ++ + ++ V S+L+ Y KC S +F TM ++V++WT M
Sbjct: 311 SVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGM 370
Query: 247 LVGYGQNGCSEEAVKIFCNM-QRN------------------------------GIEPDD 275
+ Y + G + AV++F M +RN G+E D
Sbjct: 371 ITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISD 430
Query: 276 FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNE 335
TL S+I++C L S + Q G + G++S + ALV Y +CG +ED+ ++F +
Sbjct: 431 CTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQ 490
Query: 336 MNVRDEVS--WTALVSGYAKFGKANETIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLV 392
++ ++ + T+++ GYA+ GK NE I LF S G + DEV +LS C G
Sbjct: 491 RSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFH 550
Query: 393 EKGR--HYFEI---MVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGW 447
E G+ H + ++ E G+ + + S+ +++A N M D + W
Sbjct: 551 EMGKQMHCHALKSGLITETGVG------NATVSMYSKCWNMDDAVRVFNTMNM-QDIVSW 603
Query: 448 ATLLSSCRIH--GNVEIGKWAAESLLELDPYNPASYVLLSSIY 488
L++ +H G+ +G W + P + ++ L+ S Y
Sbjct: 604 NGLVAGHVLHWQGDKALGIWKKMEKAGIKP-DSITFALIISAY 645
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 191/362 (52%), Gaps = 37/362 (10%)
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
E++I + N +I+ L+ GLV ++ ++F G+ + +S+T +I+G ++ E EA++LF
Sbjct: 127 EEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFA 186
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M G+ +++TF ++LTAC + + G Q+H +++ VF+ +AL+ +YCKC
Sbjct: 187 MLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGF 246
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR-NGIEPDDFTLGSVIS 283
+ +F M +++ SW ++ + +EA F MQ G++ D F+L ++++
Sbjct: 247 LDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLT 306
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+CA +G Q H +L GL S ++VS++L+ FY KCG+ D LF M +RD ++
Sbjct: 307 ACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVIT 366
Query: 344 WTALVSGYAKFGKANETIDLFEK-------------------------------MLSHGL 372
WT +++ Y +FG + +++F K ML G+
Sbjct: 367 WTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGV 426
Query: 373 KPDEVTLIGVLSACSRAGLVE--KGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEE 430
+ + TL +++AC GL++ K + V ++GI T ++D+ +R GR+E+
Sbjct: 427 EISDCTLTSIITAC---GLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMED 483
Query: 431 AK 432
A+
Sbjct: 484 AE 485
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 143/262 (54%), Gaps = 5/262 (1%)
Query: 193 GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
+ +HA ++ + +++F+G+AL+ Y K ++ A+ VF ++ NVVS+TA++ G+ +
Sbjct: 116 ARAVHAQFLKLE--EDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSK 173
Query: 253 NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITV 312
+ +EAV++F M +GIEP+++T +++++C + G+Q HG + GL+S + +
Sbjct: 174 SDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFI 233
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM-LSHG 371
NAL+ Y KCG ++ RLF EM RD SW ++S K K +E D F M L G
Sbjct: 234 CNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKG 293
Query: 372 LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEA 431
LK D +L +L+AC+ + KG+ + +K G+ + +I ++ G +
Sbjct: 294 LKVDHFSLSTLLTACAGSVKPMKGQQLHALALK-VGLESHLSVSSSLIGFYTKCGSANDV 352
Query: 432 KSFINKMPFPPDAIGWATLLSS 453
MP D I W +++S
Sbjct: 353 TDLFETMPI-RDVITWTGMITS 373
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/644 (37%), Positives = 373/644 (57%), Gaps = 33/644 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+WN +I+ + H + M + G+ S T ++L + G+ I
Sbjct: 174 DIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSS-TLVSILPTIGQANALHQGKAI 232
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H + ++ F V + + L+DMYAK L++ A
Sbjct: 233 HAYYIRNFFFDNVVLQTALLDMYAKCHLLFYA---------------------------- 264
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR-LEGLAMDQFTFGSVLTA 183
R++F + K+ + W+ MI G + + +A+ L+ +M + GL T ++L A
Sbjct: 265 ---RKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRA 321
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C L L+ GK++H +I++ + VG++L+ MY KC + A M K+ VS+
Sbjct: 322 CAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSY 381
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
+A++ G QNG +E+A+ IF MQ +GI P T+ +++ +C++LA+L+ GT HG ++V
Sbjct: 382 SAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVV 441
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
G + ++ NA++ Y KCG I S +F+ M RD +SW ++ GY G E + L
Sbjct: 442 RGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSL 501
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F+++ + GLKPD+VTLI VLSACS +GLV +G+++F M + + I+P HY CM+D+L+
Sbjct: 502 FQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLA 561
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
RAG L+EA +FI +MPF P+ W LL++CR H N+E+G+ ++ + L P ++VL
Sbjct: 562 RAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVL 621
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
+S+IY+S G+WD + +R R G +K PGCSW++ +H+F S P S I +
Sbjct: 622 MSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSASINKK 681
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
L++L +M K GY D S VLHDVE EK ++L +HSEK+AIAFG+L P I V KN
Sbjct: 682 LQELLVQMKKLGYRADSSFVLHDVEEEEKEQILLYHSEKVAIAFGILNTSPSSRILVTKN 741
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LR+C DCH+A K+I+ +T+REI VRDA RFH FK+G C+C DFW
Sbjct: 742 LRICVDCHSAIKFITLLTEREITVRDASRFHHFKDGICNCQDFW 785
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 137/463 (29%), Positives = 234/463 (50%), Gaps = 41/463 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P V WN++I +A G ++ +Y ML+ G+ + TF +L SS + + L
Sbjct: 67 IPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGV-TPTNFTFPFLLKACSSLQALQL 125
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR IH H G ++V + L+ MYAK G +Y A+ F+ + +
Sbjct: 126 GRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQ-------------- 171
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
D+D ++W MI + L + I +M+ G+ + T S+
Sbjct: 172 ---------------DRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSI 216
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L G AL +GK IHA+ IRN DNV + +AL+DMY KC + YA +F T+ KN
Sbjct: 217 LPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKND 276
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQ-RNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
V W+AM+ GY + +A+ ++ +M G+ P TL +++ +CA L L+ G + H
Sbjct: 277 VCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHC 336
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ +G+ TV N+L++ Y KCG ++++ +EM +D VS++A++SG + G A +
Sbjct: 337 HMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEK 396
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR--HYFEIMVKEYGIRPIHDHYTC 417
+ +F +M S G+ P T+I +L ACS ++ G H + + V+ + +D C
Sbjct: 397 ALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTV-VRGF----TNDTSIC 451
Query: 418 --MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ID+ S+ G++ ++ ++M D I W T++ IHG
Sbjct: 452 NAIIDMYSKCGKITISREIFDRMQ-NRDIISWNTMIIGYGIHG 493
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 174/346 (50%), Gaps = 5/346 (1%)
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+ R ++ +R +F + + W MI +G +++I L+ M G+ FTF
Sbjct: 52 ISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFP 111
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW- 237
+L AC L AL+ G+ IH +++V +AL+ MY KC + A+++F +++
Sbjct: 112 FLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQ 171
Query: 238 -KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
+++V+W AM+ + + + + MQ+ G+ P+ TL S++ + +L +G
Sbjct: 172 DRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKA 231
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H + + + AL+ Y KC + + ++FN +N +++V W+A++ GY
Sbjct: 232 IHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDS 291
Query: 357 ANETIDLFEKMLS-HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
++ + L++ ML +GL P TL +L AC++ +++G+ M+K G+
Sbjct: 292 ISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKS-GMDLDTTVG 350
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+I + ++ G ++ A F+++M D + ++ ++S C +G E
Sbjct: 351 NSLISMYAKCGIMDNAVGFLDEM-IAKDTVSYSAIISGCVQNGYAE 395
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 131/267 (49%), Gaps = 4/267 (1%)
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
I+ A VF + +VV W M+ Y +G ++++ ++ +M + G+ P +FT ++ +
Sbjct: 57 IQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKA 116
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV--RDEV 342
C++L +L+ G H + + GL + VS AL+ Y KCG++ + LFN ++ RD V
Sbjct: 117 CSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIV 176
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
+W A+++ ++ +TI +M G+ P+ TL+ +L +A + +G+
Sbjct: 177 AWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYY 236
Query: 403 VKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
++ + + T ++D+ ++ L A+ N + D + W+ ++ +H ++
Sbjct: 237 IRNFFFDNVVLQ-TALLDMYAKCHLLFYARKIFNTVNKKND-VCWSAMIGGYVLHDSISD 294
Query: 463 GKWAAESLLELDPYNPASYVLLSSIYA 489
+ +L + NP L + + A
Sbjct: 295 ALALYDDMLCIYGLNPTPATLATMLRA 321
>gi|449482566|ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Cucumis sativus]
Length = 908
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 244/653 (37%), Positives = 380/653 (58%), Gaps = 7/653 (1%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYN-LMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
MP D SWN +IS ++A + + L GL + + ST+L +
Sbjct: 257 MPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGL-KVDHFSLSTLLTACAGSVKPM 315
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G+Q+H LK G S++ V S L+ Y K G D F+ +P ++++ + MIT +
Sbjct: 316 KGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYM 375
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
G+++ + +F M ++ IS+ ++ GL +N A++LF EM EG+ + T S
Sbjct: 376 EFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTS 435
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
++TACG L + + +QI F+++ N + +ALVDMY +C ++ AE +F + +N
Sbjct: 436 IITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLEN 495
Query: 240 --VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQ 296
T+M+ GY +NG EA+ +F + Q G I D+ S++S C ++ E G Q
Sbjct: 496 DYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGMQ 555
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H +L +GLI+ V NA V+ Y KC N++D+ R+FN MN++D VSW LV+G+ +
Sbjct: 556 MHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQ 615
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSAC--SRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
++ + +++KM G+KPD +T ++SA + LV+ R F M E+ I+P +H
Sbjct: 616 GDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHNIKPTLEH 675
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
Y I +L R G LEEA+ I MP PD W LL+SCRI+ N + K AA ++L ++
Sbjct: 676 YASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEKLAARNILAVE 735
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS 534
P +P SY+L S++Y++ G+W + ++R MREKG RK P SWI +++++H F A D S
Sbjct: 736 PKDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWIIHENKIHSFYARDRSH 795
Query: 535 PYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPP 594
P IY+ LE L + +K GYVPD S VL +VE +K + L +HS KLA FG+L P
Sbjct: 796 PQGKDIYSGLEILILECLKVGYVPDTSFVLQEVEERQKKEFLFYHSGKLAATFGILMTKP 855
Query: 595 GLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G PI++VKN+R+C DCHN KY+S +T+R+IL+RD FH F +G+CSC D+W
Sbjct: 856 GKPIQIVKNVRLCGDCHNFLKYVSIVTRRKILLRDTSGFHWFIDGQCSCTDYW 908
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 141/523 (26%), Positives = 245/523 (46%), Gaps = 80/523 (15%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VS+ LISG + ++AV+++ ML G+ + TF +L LG Q+HG
Sbjct: 162 VSYTALISGFSKSDWEDEAVELFFAMLDSGI-EPNEYTFVAILTACIRNMDYQLGSQVHG 220
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++K G S VF+ + L+ +Y K G + R F+E+PE++I +NT+I+ L++ +E
Sbjct: 221 IVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDE 280
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+ FRGM+ +GL +D F+ ++LTAC G
Sbjct: 281 AFDYFRGMQ------------------------------LCKGLKVDHFSLSTLLTACAG 310
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+ +G+Q+HA ++ + ++ V S+L+ Y KC S +F TM ++V++WT M
Sbjct: 311 SVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGM 370
Query: 247 LVGYGQNGCSEEAVKIFCNM-QRN------------------------------GIEPDD 275
+ Y + G + AV++F M +RN G+E D
Sbjct: 371 ITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISD 430
Query: 276 FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNE 335
TL S+I++C L S + Q G + G++S + ALV Y +CG +ED+ ++F +
Sbjct: 431 CTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQ 490
Query: 336 MNVRDEVS--WTALVSGYAKFGKANETIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLV 392
++ ++ + T+++ GYA+ GK NE I LF S G + DEV +LS C G
Sbjct: 491 RSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFH 550
Query: 393 EKG--RHYFEI---MVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGW 447
E G H + ++ E G+ + + S+ +++A N M D + W
Sbjct: 551 EMGMQMHCHALKSGLITETGVG------NATVSMYSKCWNMDDAVRVFNTMNM-QDIVSW 603
Query: 448 ATLLSSCRIH--GNVEIGKWAAESLLELDPYNPASYVLLSSIY 488
L++ +H G+ +G W + P + ++ L+ S Y
Sbjct: 604 NGLVAGHVLHWQGDKALGIWKKMEKAGIKP-DSITFALIISAY 645
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 191/362 (52%), Gaps = 37/362 (10%)
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
E++I + N +I+ L+ GLV ++ ++F G+ + +S+T +I+G ++ E EA++LF
Sbjct: 127 EEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFA 186
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M G+ +++TF ++LTAC + + G Q+H +++ VF+ +AL+ +YCKC
Sbjct: 187 MLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGF 246
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR-NGIEPDDFTLGSVIS 283
+ +F M +++ SW ++ + +EA F MQ G++ D F+L ++++
Sbjct: 247 LDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLT 306
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+CA +G Q H +L GL S ++VS++L+ FY KCG+ D LF M +RD ++
Sbjct: 307 ACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVIT 366
Query: 344 WTALVSGYAKFGKANETIDLFEK-------------------------------MLSHGL 372
WT +++ Y +FG + +++F K ML G+
Sbjct: 367 WTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGV 426
Query: 373 KPDEVTLIGVLSACSRAGLVE--KGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEE 430
+ + TL +++AC GL++ K + V ++GI T ++D+ +R GR+E+
Sbjct: 427 EISDCTLTSIITAC---GLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMED 483
Query: 431 AK 432
A+
Sbjct: 484 AE 485
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 143/262 (54%), Gaps = 5/262 (1%)
Query: 193 GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
+ +HA ++ + +++F+G+AL+ Y K ++ A+ VF ++ NVVS+TA++ G+ +
Sbjct: 116 ARAVHAQFLKLE--EDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSK 173
Query: 253 NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITV 312
+ +EAV++F M +GIEP+++T +++++C + G+Q HG + GL+S + +
Sbjct: 174 SDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFI 233
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM-LSHG 371
NAL+ Y KCG ++ RLF EM RD SW ++S K K +E D F M L G
Sbjct: 234 CNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKG 293
Query: 372 LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEA 431
LK D +L +L+AC+ + KG+ + +K G+ + +I ++ G +
Sbjct: 294 LKVDHFSLSTLLTACAGSVKPMKGQQLHALALK-VGLESHLSVSSSLIGFYTKCGSANDV 352
Query: 432 KSFINKMPFPPDAIGWATLLSS 453
MP D I W +++S
Sbjct: 353 TDLFETMPI-RDVITWTGMITS 373
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 247/652 (37%), Positives = 380/652 (58%), Gaps = 43/652 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD- 59
MP D +SWN +ISG+ +G + ++++++M + + TM ++S+ +D
Sbjct: 259 MPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDP----DLITMTTVASACELLDN 314
Query: 60 --LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
LGR +HG+++K FG + + + L+ MY+ LG +
Sbjct: 315 ERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRL------------------------ 350
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
EE+ +F M+ KD +SWT MI L+ + L +A++ ++ M LEG+ D+ T
Sbjct: 351 -------EEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITL 403
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
SVL+AC + L+ G ++H I+ +V V ++L+DMY KCK + A VFR ++
Sbjct: 404 VSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISG 463
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
KNVVSWT++++G N S EA+ F M+ + ++P+ TL SV+S+CA + +L G +
Sbjct: 464 KNVVSWTSLILGLRINNRSFEALLFFRQMKES-MKPNSVTLISVLSACARIGALMRGKEI 522
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H +L TG+ + NA++ Y +CG + FN +D +W L++GYA+ G+A
Sbjct: 523 HAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQK-KDVTAWNILLTGYAQQGQA 581
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
++LF+KML + PDE+T I +L ACS++G+V +G YF IM +Y + P HY C
Sbjct: 582 KLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYAC 641
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
++DIL RAG+L++A FI MP PDA W LL++CRIH NVE+G+ AA+ + E D +
Sbjct: 642 VVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKS 701
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
Y+LL ++YA G WD VS++R MRE+G+ DPGCSW++ K +VH F + D S S
Sbjct: 702 VGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQS 761
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
+I L+ KM + G+ SS ++E S + + HSE+ AIAFGL+ PG+P
Sbjct: 762 KEINGVLDGFCSKMKENGFGNLKSSFTSEIE-SSRADIFCGHSERQAIAFGLINTAPGMP 820
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGD--FW 647
I V KNL +C CHN K+IS I +REI VRD +H FK+G CSCGD +W
Sbjct: 821 IWVXKNLYMCHSCHNMVKFISTIVRREISVRDVEEYHHFKDGVCSCGDEGYW 872
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 146/478 (30%), Positives = 244/478 (51%), Gaps = 44/478 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D SWN+L+ G+A G ++A+ +Y+ ML + + TF ++L + +
Sbjct: 158 MSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEI-RPNVYTFPSVLKTCAGVSDIAR 216
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G++IH H+++FGF S V VG+ L+ MY K G I +A
Sbjct: 217 GKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNA------------------------ 252
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
R LF M +D ISW MI+G +NG E ++LF MR + D T +V
Sbjct: 253 -------RMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTV 305
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+AC L G+ +H ++++++ ++ + ++L+ MY ++ AE+VF M K+V
Sbjct: 306 ASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDV 365
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWTAM+ + +AV+ + M+ GI PD+ TL SV+S+CA + L+ G + H
Sbjct: 366 VSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEI 425
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ TGL+S + VSN+L+ Y KC ++++ +F ++ ++ VSWT+L+ G ++ E
Sbjct: 426 AIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEA 485
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR----HYFEIMVKEYGIRPIHDHYT 416
+ LF + + +KP+ VTLI VLSAC+R G + +G+ H V G P
Sbjct: 486 L-LFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLP-----N 539
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
++D+ R GR A + N D W LL+ G ++ + +LEL+
Sbjct: 540 AILDMYVRCGRKVPALNQFNSQ--KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELE 595
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 204/401 (50%), Gaps = 19/401 (4%)
Query: 112 NTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLA 171
N +++ +R G + ++ +F M ++D SW ++ G + G EA++L+ M +
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
+ +TF SVL C G+ + GK+IHA +IR + +V VG+AL+ MY KC I A +
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARML 255
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASL 291
F M ++ +SW AM+ GY +NG E +++F M+ ++PD T+ +V S+C L +
Sbjct: 256 FDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNE 315
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
G HG + + I+++N+L+ Y G +E++ +F+ M +D VSWTA+++
Sbjct: 316 RLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASL 375
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
+ ++ ++ M G+ PDE+TL+ VLSAC+ G ++ G EI +K G+
Sbjct: 376 VSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKT-GLVSH 434
Query: 412 HDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL 471
+ID+ S+ ++ A + + + W +L+ RI+ + E+LL
Sbjct: 435 VIVSNSLIDMYSKCKCVDNALEVFRNIS-GKNVVSWTSLILGLRINNR------SFEALL 487
Query: 472 EL----DPYNPASYVLLSSIYAS-------KGKWDHVSQLR 501
+ P S L+S + A +GK H LR
Sbjct: 488 FFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAHALR 528
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 181/345 (52%), Gaps = 10/345 (2%)
Query: 146 ITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH 205
+ G ++ ++R ++ E+R+E +++ + ++L C A +EG +++ + +
Sbjct: 74 LQGNLEQAMKR--LESMLELRIE---VEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKS 128
Query: 206 KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCN 265
V +G+AL+ M+ + ++ A VF M+ ++V SW ++ GY + GC +EA+ ++
Sbjct: 129 CLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHR 188
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M I P+ +T SV+ +CA ++ + G + H + G S + V NAL+T Y KCG+
Sbjct: 189 MLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGD 248
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
I ++ LF++M RD +SW A++SGY + G E ++LF M + PD +T+ V SA
Sbjct: 249 ISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASA 308
Query: 386 CSRAGLVEKGRHYFEIMVK-EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDA 444
C GR +VK E+G ++ +I + S GRLEEA++ ++M D
Sbjct: 309 CELLDNERLGRGVHGYVVKSEFGGDISMNN--SLIQMYSSLGRLEEAETVFSRME-SKDV 365
Query: 445 IGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYA 489
+ W +++S H + ++EL+ P L+S + A
Sbjct: 366 VSWTAMIASLVSH-KLPFKAVETYKMMELEGILPDEITLVSVLSA 409
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/643 (36%), Positives = 369/643 (57%), Gaps = 32/643 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+W ++S ++ + A+ ++ M G + ++ L + LG+ I
Sbjct: 213 DAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKP-NPFVLTSALKAAVCLSSALLGKGI 271
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG +K + + VG L+DMYAK G I DA F+ +P ++++
Sbjct: 272 HGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVIL-------------- 317
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
W+ +I+ Q+ +A ++F M + ++F+ VL AC
Sbjct: 318 -----------------WSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQAC 360
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+ LE G+QIH I+ ++ +FVG+AL+DMY KC++++ + +F ++ N VSW
Sbjct: 361 ANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWN 420
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++VGY Q+G +E+A+ +F M+ + T SV+ +CAN +S++ Q H +
Sbjct: 421 TIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKS 480
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
+ V N+L+ Y KCG I D+ ++F + D VSW +++S YA G+A ++LF
Sbjct: 481 TFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELF 540
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
++M +K ++VT + +LS C GLV +G F M+ ++ I+P +HYTC++ +L R
Sbjct: 541 DRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGR 600
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AGRL +A FI +P P + W LLSSC +H NV +G++AAE +L+++P++ +YVLL
Sbjct: 601 AGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTYVLL 660
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S++YA+ G D V+ R++MR GV+K+ G SW++ K VH FS P I A L
Sbjct: 661 SNMYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVGSADHPDMRIINAML 720
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
E LN K +EGYVPD++ VLHDV+ EK +ML HSE+LA+A+GL PPG PIR++KNL
Sbjct: 721 EWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNL 780
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R C DCH K ISKI QREI+VRD RFH F+ G CSCGD+W
Sbjct: 781 RSCLDCHTMFKVISKIVQREIIVRDINRFHHFEEGICSCGDYW 823
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 130/495 (26%), Positives = 237/495 (47%), Gaps = 39/495 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VS+ L+ G+A G +A++++ + ++G ++ +T+L + + L
Sbjct: 108 MPERNRVSFVTLMQGYALRGEFEEALELFRRLQREG-HEVNHFVLTTILKVLVTMDAPGL 166
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
IH K G FVG+ L+D Y+ G + A+ FD
Sbjct: 167 ACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFD------------------- 207
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G+ KD+++WT M++ +N + A++ F +MR+ G + F S
Sbjct: 208 ------------GIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSA 255
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A L + GK IH ++ + VG AL+DMY KC I+ A ++F + +V
Sbjct: 256 LKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDV 315
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+ W+ ++ Y Q+ +E+A ++F M R+ + P++F+L V+ +CAN+A LE G Q H
Sbjct: 316 ILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNL 375
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ G S + V NAL+ Y KC N+E+S +F+ + +EVSW ++ GY + G A +
Sbjct: 376 AIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDA 435
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC--M 418
+ +F +M + + +VT VL AC+ ++ ++ K +D C +
Sbjct: 436 LSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTF---NNDTIVCNSL 492
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD-PYN 477
ID ++ G + +A + D + W +++S+ +HG + + + D N
Sbjct: 493 IDTYAKCGFIRDALKVFESI-VECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKAN 551
Query: 478 PASYVLLSSIYASKG 492
++V L S+ S G
Sbjct: 552 DVTFVSLLSVCGSTG 566
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 183/379 (48%), Gaps = 38/379 (10%)
Query: 33 LKDGLGNLSRITFSTMLIMSSSRRCVD-----LGRQIHGHILKFGFGSYV--FVGSPLVD 85
L D L +L+ + +RC+ GR +H +++ G + + F + L++
Sbjct: 31 LDDELASLALPKLDSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLN 90
Query: 86 MYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTM 145
YAKLG + A+R FD +PE+N V + T++ G RG E
Sbjct: 91 FYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFE-------------------- 130
Query: 146 ITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH 205
EA++LFR ++ EG ++ F ++L + A IHA + H
Sbjct: 131 -----------EALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGH 179
Query: 206 KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCN 265
N FVG+AL+D Y C ++ +A VF + K+ V+WTAM+ Y +N E A+ F
Sbjct: 180 DRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSK 239
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M+ G +P+ F L S + + L+S G HG S+ T + V AL+ Y KCG+
Sbjct: 240 MRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGD 299
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
IED+H +F + D + W+ L+S YA+ + + ++F +M+ + P+E +L GVL A
Sbjct: 300 IEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQA 359
Query: 386 CSRAGLVEKGRHYFEIMVK 404
C+ +E G + +K
Sbjct: 360 CANIAFLELGEQIHNLAIK 378
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 192/397 (48%), Gaps = 37/397 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D + W+ LIS +A A +++ M++ + + + S +L ++ ++L
Sbjct: 310 IPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVP-NEFSLSGVLQACANIAFLEL 368
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G QIH +K G+ S +FVG+ L+DMYAK +N+
Sbjct: 369 GEQIHNLAIKLGYESELFVGNALMDMYAKC---------------RNM------------ 401
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
E S +F ++D + +SW T+I G Q+G +A+ +F EMR + Q TF SV
Sbjct: 402 ----ENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSV 457
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC +++ QIH+ I ++ ++ V ++L+D Y KC I+ A VF ++ +V
Sbjct: 458 LRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDV 517
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW +++ Y +G + A+++F M ++ I+ +D T S++S C + + +G
Sbjct: 518 VSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNS 577
Query: 301 SLVTGLIS-FITVSNALVTFYGKCGNIEDSHRLFNEM-NVRDEVSWTALVSGYAKFGKAN 358
++ I + +V G+ G + D+ + ++ + + W AL+S
Sbjct: 578 MMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVA 637
Query: 359 ETIDLFEKMLSHGLKP-DEVTLIGVLSACSRAGLVEK 394
EK+L ++P DE T + + + + AG++++
Sbjct: 638 LGRYAAEKVLD--IEPHDETTYVLLSNMYAAAGILDE 672
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 141/317 (44%), Gaps = 13/317 (4%)
Query: 144 TMITGLMQNGLEREAIDLFREMRLEGLAM---DQFTFGSVLTACGGLLALEEGKQIHAFI 200
+ I GL+ L + + L LA+ D + L C G+ +HA +
Sbjct: 12 SQINGLLSRNLAANEALQWLDDELASLALPKLDSYACARFLQRCIARGDARAGRAVHARV 71
Query: 201 IRND--HKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEE 258
++ + + F + L++ Y K + A +F M +N VS+ ++ GY G EE
Sbjct: 72 VQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEE 131
Query: 259 AVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVT 318
A+++F +QR G E + F L +++ + + H + G V AL+
Sbjct: 132 ALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTALID 191
Query: 319 FYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVT 378
Y CG + + +F+ + +D V+WTA+VS Y++ ++ F KM G KP+
Sbjct: 192 AYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFV 251
Query: 379 LIGVLSA--CSRAGLVEKGRHYFEIMVKEYGIRPIHDHY-TCMIDILSRAGRLEEAKSFI 435
L L A C + L+ KG H + Y P H ++D+ ++ G +E+A +
Sbjct: 252 LTSALKAAVCLSSALLGKGIHGCSVKTL-YDTEP---HVGGALLDMYAKCGDIEDAHAIF 307
Query: 436 NKMPFPPDAIGWATLLS 452
+P D I W+ L+S
Sbjct: 308 EMIPH-DDVILWSFLIS 323
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 92/223 (41%), Gaps = 13/223 (5%)
Query: 274 DDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITV--SNALVTFYGKCGNIEDSHR 331
D + + C G H R + G ++ + +N L+ FY K G + + R
Sbjct: 44 DSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARR 103
Query: 332 LFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGL 391
LF+ M R+ VS+ L+ GYA G+ E ++LF ++ G + + L +L L
Sbjct: 104 LFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKV-----L 158
Query: 392 VEKGRHYFEIMVKEYGIRPIHDHY----TCMIDILSRAGRLEEAKSFINKMPFPPDAIGW 447
V + + HD T +ID S G + A+ + + DA+ W
Sbjct: 159 VTMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGI-VGKDAVTW 217
Query: 448 ATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYAS 490
T + SC ++ S + + + P +VL S++ A+
Sbjct: 218 -TAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAA 259
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/526 (40%), Positives = 332/526 (63%), Gaps = 1/526 (0%)
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G V ++R +F M +D +SWT +I G QN + EAI L +M + FTF S+L
Sbjct: 6 GAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLL 65
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
A G G+Q+HA ++ + ++V+VGSAL+DMY +C+ + A VF + KN V
Sbjct: 66 KATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEV 125
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW A++ G+ + E + F MQRNG FT S+ S+ A + +LE+G H
Sbjct: 126 SWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHL 185
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ +G V N ++ Y K G++ D+ ++F+ M+ RD V+W +++ A++G E +
Sbjct: 186 IKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAV 245
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
FE++ G++ +++T + VL+ACS GLV++G+HYF++M K+Y ++P DHY +D+
Sbjct: 246 AHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMM-KDYNVQPEIDHYVSFVDL 304
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
L RAG L+EA F+ KMP P A W LL +CR+H N ++G++AA+ + ELDP +
Sbjct: 305 LGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPP 364
Query: 482 VLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIY 541
VLL +IYAS GKW+ +++R+ M+ GV+K+P CSW++ ++ VH+F ADD + P S IY
Sbjct: 365 VLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIY 424
Query: 542 AELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVV 601
E++N ++ K GYVP+ + VL + E+ L +HSEK+A+AF L+ +P G IR++
Sbjct: 425 RMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIM 484
Query: 602 KNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KN+R+C DCH+A KY+SK+ +REI+VRD RFH F G CSCGD+W
Sbjct: 485 KNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 530
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 148/297 (49%), Gaps = 32/297 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSW LI+G+A + +A+ + ML+ + TF+++L + + +
Sbjct: 18 MPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARF-RPNGFTFTSLLKATGACGGCSI 76
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+H +K+ + V+VGS L+DMYA+ + A FD L KN V +N +I G R
Sbjct: 77 GEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFAR 136
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ E T LM+ F EM+ G FT+ S+
Sbjct: 137 KADGE---------------------TTLMK----------FAEMQRNGFGATHFTYSSM 165
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+A + ALE+G+ +HA +I++ K FVG+ ++ MY K S+ A VF M +++
Sbjct: 166 FSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDL 225
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
V+W ML Q G +EAV F +++ GI+ + T SV+++C++ ++EG +
Sbjct: 226 VTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHY 282
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 128/256 (50%), Gaps = 5/256 (1%)
Query: 218 MYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFT 277
MYCKC ++ A VF M ++VVSWT ++ GY QN EA+ + +M R P+ FT
Sbjct: 1 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60
Query: 278 LGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN 337
S++ + G Q H ++ + V +AL+ Y +C ++ + +F+ +
Sbjct: 61 FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120
Query: 338 VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH 397
++EVSW AL++G+A+ T+ F +M +G T + SA +R G +E+GR
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180
Query: 398 YFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIH 457
++K G + M+ + +++G + +A+ ++M D + W T+L++ +
Sbjct: 181 VHAHLIKS-GQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMD-KRDLVTWNTMLTALAQY 238
Query: 458 GNVEIGKWAAESLLEL 473
G +GK A E+
Sbjct: 239 G---LGKEAVAHFEEI 251
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 102/201 (50%), Gaps = 38/201 (18%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSWN LI+G A + + M ++G G + T+S+M + ++ GR +H
Sbjct: 125 VSWNALIAGFARKADGETTLMKFAEMQRNGFG-ATHFTYSSMFSAFARIGALEQGRWVHA 183
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
H++K G FVG+ ++ MYAK G + DA++ FD + ++++V +NTM+
Sbjct: 184 HLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTML----------- 232
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC-- 184
T L Q GL +EA+ F E+R G+ ++Q TF SVLTAC
Sbjct: 233 --------------------TALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSH 272
Query: 185 GGLLALEEGKQIHAFIIRNDH 205
GGL ++EGK H F + D+
Sbjct: 273 GGL--VKEGK--HYFDMMKDY 289
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 241/649 (37%), Positives = 379/649 (58%), Gaps = 34/649 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +WN +ISG +G V +A++V++ M + ++ +T S++L + +
Sbjct: 200 MMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSV-SMDSVTISSLLPICVQLDDIIS 258
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G IH + +K G +FV + L++MYAK G + A+ F++
Sbjct: 259 GVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQ------------------ 300
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
MK +D +SW +++ QN A+ ++ +M G+ D T S+
Sbjct: 301 -------------MKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSL 347
Query: 181 LTACGGLLALEEGKQIHAFIIRND-HKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+ L + IH F+ R ++ +G+A++DMY K I A VF + K+
Sbjct: 348 ASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKD 407
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQR-NGIEPDDFTLGSVISSCANLASLEEGTQFH 298
V+SW +++ GY QNG + EA+ ++ +M+ +G P+ T S++++ + L +L++G + H
Sbjct: 408 VISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAH 467
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G+ + L I VS LV YGKCG + D+ LF E+ + VSW A++S + G
Sbjct: 468 GQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGL 527
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
+ + LF++M S G+KPD +T + +LSACS +GLV++G+ F++M + YGIRP HY CM
Sbjct: 528 KAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCM 587
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
+D+ RAG LE+A +F+ MP PD W LL +CRIH NVE+ + ++ LL+++ N
Sbjct: 588 VDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENV 647
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
YVLLS+IYA G W+ V ++R R++G++K PG S I+ ++ +F + + P +
Sbjct: 648 GYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCE 707
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
+IY+EL L KM GYVPD + VL DVE EK +L HSE+LA+AFG++ PP +
Sbjct: 708 EIYSELRNLTAKMKSIGYVPDYNFVLQDVEDDEKENILTSHSERLAMAFGIISTPPKTTL 767
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
++ KNLRVC DCHNATK+ISKIT+REI+VRD+ RFH FK+G CSCGD+W
Sbjct: 768 QIFKNLRVCGDCHNATKFISKITEREIIVRDSNRFHHFKDGVCSCGDYW 816
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 148/550 (26%), Positives = 254/550 (46%), Gaps = 84/550 (15%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRC--VDLGR 62
D +WN +IS +A G + AV +N L TF ++ R C +D GR
Sbjct: 105 DVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVI-----RACGNLDDGR 159
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
++H +LK GF V++ + + Y++ G + A FD N MI
Sbjct: 160 KVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFD----------NMMI------- 202
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
+D +W MI+G NG EA+++F EMR + ++MD T S+L
Sbjct: 203 --------------RDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLP 248
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
C L + G IH + I+ + ++FV +AL++MY K ++ AE++F M +++VS
Sbjct: 249 ICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVS 308
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL 302
W ++L + QN A+ ++ M G+ PD TL S+ S A L + HG
Sbjct: 309 WNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHG--F 366
Query: 303 VTGLISF---ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
VT F I + NA++ Y K G I+ + ++F + V+D +SW +L++GY++ G ANE
Sbjct: 367 VTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANE 426
Query: 360 TIDLFEKMLSH-GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
ID++ M + G P++ T + +L+A S+ G +++G ++K + I TC+
Sbjct: 427 AIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVS-TCL 485
Query: 419 IDILSRAGRLEEAKSFINKMP----------------------------------FPPDA 444
+D+ + G+L +A S ++P PD
Sbjct: 486 VDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDH 545
Query: 445 IGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA--SYVLLSSIYASKGKWDHVSQLRR 502
I + +LLS+C G V+ G+W + + E P+ Y + ++ G H+ +
Sbjct: 546 ITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAG---HLEKAFN 602
Query: 503 TMREKGVRKD 512
++ VR D
Sbjct: 603 FVKNMPVRPD 612
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 201/422 (47%), Gaps = 44/422 (10%)
Query: 35 DGLGNLSR-ITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLI 93
DG+ N R I F+ + + + V L +Q+H ++ G +F+ + L++ YA LG I
Sbjct: 35 DGVENEKREIDFNRIFLYCTK---VHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDI 91
Query: 94 YDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNG 153
A+ FD++ + KD +W +MI+ + G
Sbjct: 92 PHARLTFDQI-------------------------------QTKDVYTWNSMISAYARIG 120
Query: 154 LEREAIDLFRE-MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVG 212
A+D F E + L D +TF V+ ACG L ++G+++H +++ + +V++
Sbjct: 121 HFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNL---DDGRKVHCLVLKLGFECDVYIA 177
Query: 213 SALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE 272
++ + Y + + A ++F M +++ +W AM+ G+ NG EA+++F M+ +
Sbjct: 178 ASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVS 237
Query: 273 PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRL 332
D T+ S++ C L + G H ++ GL + V NAL+ Y K G + + +
Sbjct: 238 MDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETI 297
Query: 333 FNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLV 392
FN+M VRD VSW +L++ + + K + ++ KM S G+ PD +TL+ + S + G
Sbjct: 298 FNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNF 357
Query: 393 EKGRHYFEIMVKEYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATL 450
R + + +HD +ID+ ++ G ++ A+ +P D I W +L
Sbjct: 358 LSSRSIHGFVTRRCWF--LHDIALGNAIIDMYAKLGFIDSARKVFEGLPV-KDVISWNSL 414
Query: 451 LS 452
++
Sbjct: 415 IT 416
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 134/266 (50%), Gaps = 14/266 (5%)
Query: 193 GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
KQ+HA ++ + ++F+ + L++ Y I +A F + K+V +W +M+ Y +
Sbjct: 59 AKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYAR 118
Query: 253 NGCSEEAVKIFCN-MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFIT 311
G AV F + + ++ D +T VI +C N L++G + H L G +
Sbjct: 119 IGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGN---LDDGRKVHCLVLKLGFECDVY 175
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG 371
++ + + FY + G + + LF+ M +RD +W A++SG+ GK E +++F++M
Sbjct: 176 IAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKS 235
Query: 372 LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR--PIHDHYTC--MIDILSRAGR 427
+ D VT+ +L C + + G +++ Y I+ D + C +I++ ++ G
Sbjct: 236 VSMDSVTISSLLPICVQLDDIISG-----VLIHVYAIKLGLEFDLFVCNALINMYAKFGE 290
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSS 453
L A++ N+M D + W +LL++
Sbjct: 291 LRSAETIFNQMKV-RDIVSWNSLLAA 315
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 6/166 (3%)
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
Q H +V+G I +S L+ Y G+I + F+++ +D +W +++S YA+ G
Sbjct: 61 QLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIG 120
Query: 356 KANETIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
+ +D F + LS L+ D T V+ AC G ++ GR +V + G
Sbjct: 121 HFHAAVDCFNEFLSTSFLQSDHYTFPPVIRAC---GNLDDGRK-VHCLVLKLGFECDVYI 176
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
I SR G + A + + M D W ++S ++G V
Sbjct: 177 AASFIHFYSRFGFVSLACNLFDNMMI-RDIGTWNAMISGFYLNGKV 221
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 250/660 (37%), Positives = 375/660 (56%), Gaps = 45/660 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVK-VYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
MP D V+WN +++G+A HG + AV + ++ ++ + T +L + + + +
Sbjct: 186 MPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALA 245
Query: 60 LGRQIHGHIL----------KFGFGSYVFVGSPLVDMYAKLG-LIYDAKRGFDELPEKNI 108
G +H + + K V +G+ L+DMYAK G L+Y
Sbjct: 246 QGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLY-------------- 291
Query: 109 VMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE 168
+RR+F M ++ ++W+ +I G + +A LF+ M +
Sbjct: 292 ------------------ARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQ 333
Query: 169 GLA-MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY 227
GL + + S L AC L L G+Q+HA + ++ ++ G++L+ MY K I
Sbjct: 334 GLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQ 393
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN 287
A ++F MA K+ VS++A++ GY QNG +EEA +F MQ +EPD T+ S+I +C++
Sbjct: 394 AIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSH 453
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
LA+L+ G HG ++ GL S ++ NAL+ Y KCG I+ S ++FN M RD VSW +
Sbjct: 454 LAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTM 513
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYG 407
++GY G E LF +M + G PD VT I +LSACS +GLV +G+H+F +M YG
Sbjct: 514 IAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYG 573
Query: 408 IRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAA 467
+ P +HY CM+D+LSR G L+EA FI MP D W LL +CR++ N+++GK +
Sbjct: 574 LTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVS 633
Query: 468 ESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF 527
+ EL P ++VLLS+IY++ G++D +++R + +G +K PGCSWI+ +H F
Sbjct: 634 RMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAF 693
Query: 528 SADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAF 587
D S P S +IY EL+ + + K GY PD S VL D+E EK K L HSEKLAIA+
Sbjct: 694 VGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAY 753
Query: 588 GLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G+L + I V KNLRVC DCH K+IS + +R I+VRDA RFH FKNG+CSCGDFW
Sbjct: 754 GILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 144/523 (27%), Positives = 250/523 (47%), Gaps = 64/523 (12%)
Query: 1 MPFHDGVSWNLLISGHASHG--SVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCV 58
+P D ++N LI ++S + D + +Y ML+ + + TF L S+
Sbjct: 83 IPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAP-NNYTFPFALKACSALADH 141
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
GR IH H + G + +FV + L+DMY K + DA F +P +++V +N M+ G
Sbjct: 142 HCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGY 201
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
G+ + M +M++ L + T
Sbjct: 202 AHHGMYHHAVAHLLSM-----------------------------QMQMHRLRPNASTLV 232
Query: 179 SVLTACGGLLALEEGKQIHAFIIR----------NDHKDNVFVGSALVDMYCKCKSIKYA 228
++L AL +G +HA+ IR + D V +G+AL+DMY KC S+ YA
Sbjct: 233 ALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYA 292
Query: 229 ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG---IEPDDFTLGSVISSC 285
VF M +N V+W+A++ G+ +A +F M G + P ++ S + +C
Sbjct: 293 RRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRAC 350
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
A+L L G Q H +G+ + +T N+L++ Y K G I+ + LF+EM V+D VS++
Sbjct: 351 ASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYS 410
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR-HYFEIMVK 404
ALVSGY + G+A E +F+KM + ++PD T++ ++ ACS ++ GR + ++++
Sbjct: 411 ALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR 470
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
G+ +ID+ ++ GR++ ++ N MP D + W T+++ IHG +GK
Sbjct: 471 --GLASETSICNALIDMYAKCGRIDLSRQVFNMMP-SRDIVSWNTMIAGYGIHG---LGK 524
Query: 465 WAAESLLELD----PYNPASYVLLSSIYASKG------KWDHV 497
A LE++ P + +++ L S + G W HV
Sbjct: 525 EATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHV 567
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 174/384 (45%), Gaps = 44/384 (11%)
Query: 91 GLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLM 150
G + A FD++P ++ YN +I + S S T GL
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLI-------------------RAYSSSSPTAAADGL- 110
Query: 151 QNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVF 210
L+R M +A + +TF L AC L G+ IH I + ++F
Sbjct: 111 ---------HLYRRMLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLF 161
Query: 211 VGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVK--IFCNMQR 268
V +AL+DMY KC + A +F TM +++V+W AML GY +G AV + MQ
Sbjct: 162 VSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQM 221
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFHG----------RSLVTGLISFITVSNALVT 318
+ + P+ TL +++ A +L +GT H R+ + L + + AL+
Sbjct: 222 HRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLD 281
Query: 319 FYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLK-PDEV 377
Y KCG++ + R+F+ M R+EV+W+AL+ G+ + + LF+ ML+ GL
Sbjct: 282 MYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT 341
Query: 378 TLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINK 437
++ L AC+ + G ++ K G+ ++ + ++AG +++A + ++
Sbjct: 342 SIASALRACASLDHLRMGEQLHALLAKS-GVHADLTAGNSLLSMYAKAGLIDQAIALFDE 400
Query: 438 MPFPPDAIGWATLLSSCRIHGNVE 461
M D + ++ L+S +G E
Sbjct: 401 MAV-KDTVSYSALVSGYVQNGRAE 423
>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Cucumis sativus]
Length = 611
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/585 (40%), Positives = 351/585 (60%), Gaps = 38/585 (6%)
Query: 97 KRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLER 156
K GFD K+ ++ NT++ + GL+ ++ +LF M ++D +SW +++T + + R
Sbjct: 31 KAGFD----KSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKALIPR 86
Query: 157 EAIDLFREMRL-EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSAL 215
+ + M +GL D F F ++ AC L L GKQ+HA + + D+ V S+L
Sbjct: 87 RTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVKSSL 146
Query: 216 VDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCN---------- 265
+DMY KC A +VF ++ +KN VSWT+M+ GY ++G EA+ +F
Sbjct: 147 IDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWT 206
Query: 266 ---------------------MQRNGIE-PDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
M+R GI+ D L SV+ CANLA LE G Q HG +
Sbjct: 207 ALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIA 266
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
G S + +SNALV Y KC +I + +F M +D +SWT+++ G A+ GKA E + L
Sbjct: 267 LGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTL 326
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
+++M+ +KP+EVT +G+L ACS AGLV +GR F M +Y I P HYTC++D+LS
Sbjct: 327 YDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLS 386
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
R+G L+EA++ ++K+PF PD WA+LLS+C H N+E+G A+ +L+L P +P++Y+L
Sbjct: 387 RSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYIL 446
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSA-DDWSSPYSDQIYA 542
LS++YA W VS++R+ M VRK+PG S I + +F A + P ++I
Sbjct: 447 LSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHPMKNEICN 506
Query: 543 ELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVK 602
L+ L+ +M K GYVP+ S VL+D+E EK K L HSE+LA+A+GLL PG IR+VK
Sbjct: 507 LLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWHSERLAVAYGLLKAVPGTIIRIVK 566
Query: 603 NLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
NLR+C DCHN K+IS I +REI+VRDA R+H FK G+CSC DFW
Sbjct: 567 NLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEGKCSCNDFW 611
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 164/394 (41%), Gaps = 88/394 (22%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P + SW LISG G + ++N M ++G+ + + S+++ ++ ++LG
Sbjct: 198 PVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELG 257
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+QIHG ++ GF S +F+ + LVDMYAK I AK F +P K+++ + ++I G
Sbjct: 258 KQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVG---- 313
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
Q+G EA+ L+ EM L + ++ TF +L
Sbjct: 314 ---------------------------TAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLL 346
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
AC + G+++ FR+M +
Sbjct: 347 YACSHAGLVSRGREL-----------------------------------FRSMTTDYSI 371
Query: 242 S-----WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
+ +T +L ++G +EA + + + +PD+ T S++S+C +LE G +
Sbjct: 372 NPSLQHYTCLLDLLSRSGHLDEAENL---LDKIPFKPDEPTWASLLSACMRHNNLEMGVR 428
Query: 297 FHGRSL---VTGLISFITVSNALVTFYGK--CGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
R L ++I +SN + G G++ +L + M VR E ++++
Sbjct: 429 IADRVLDLKPEDPSTYILLSN---VYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSI---- 481
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
FGK ++ E H +K + L+ L A
Sbjct: 482 -DFGKDSQVFHAGES-CDHPMKNEICNLLKDLDA 513
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 64/132 (48%), Gaps = 3/132 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D +SW +I G A HG +A+ +Y+ M+ + + +TF +L S V
Sbjct: 299 MPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKP-NEVTFVGLLYACSHAGLVSR 357
Query: 61 GRQI-HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEK-NIVMYNTMITGL 118
GR++ + + + L+D+ ++ G + +A+ D++P K + + ++++
Sbjct: 358 GRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSAC 417
Query: 119 LRRGLVEESRRL 130
+R +E R+
Sbjct: 418 MRHNNLEMGVRI 429
>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 833
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 251/666 (37%), Positives = 390/666 (58%), Gaps = 49/666 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLM------LKDGLGNLSRITFSTMLIMSSSRRCV 58
D V+WN ++S ++ N AV ++ M L D +G ++ + L +
Sbjct: 194 DSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLC---- 249
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
GRQ+HG ++ G VFVG+ LVDMYAK G + DA + F+ + K++V +N M+TG
Sbjct: 250 --GRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGY 307
Query: 119 LRRGLVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
+ G E++ LF M+++ D ++W+++I+G Q G EA+D+FR+M +
Sbjct: 308 SQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNV 367
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIR-------NDHKDNVFVGSALVDMYCKCKSIKY 227
T S+L+AC + AL GK+ H + ++ ND D++ V +AL+DMY KCKS++
Sbjct: 368 VTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEV 427
Query: 228 AESVFRTMAWKN--VVSWTAMLVGYGQNGCSEEAVKIFCNMQR--NGIEPDDFTLGSVIS 283
A ++F + K+ VV+WT M+ GY Q+G + A+++F M + N I P+DFT+ V+
Sbjct: 428 ARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLM 487
Query: 284 SCANLASLEEGTQFHGRSLVTGLIS--FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE 341
+CA LA+L+ G Q H L I + V+N L+ Y K G+++ + +F+ M+ R+
Sbjct: 488 ACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNA 547
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEI 401
VSWT+L++GY G++ + +F++M L D +T + VL ACS +G+
Sbjct: 548 VSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGM---------- 597
Query: 402 MVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
++G+ P +HY CM+D+L RAGRL EA IN MP P + W LLS+CRIH N E
Sbjct: 598 ---DFGVDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEE 654
Query: 462 IGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYK 521
+ ++AA+ LLEL N +Y LLS+IYA+ +W V+++ M+ G++K PG SW+K +
Sbjct: 655 LAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIGYLMKRTGIKKIPGWSWVKGR 714
Query: 522 SRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSE 581
+ F D + S +IY L L ++ IK + LHDV+ EK L+ HSE
Sbjct: 715 KGMETFYVGDRTHLQSQKIYETLADLIKR-IKANF------SLHDVDDEEKGDQLSEHSE 767
Query: 582 KLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGEC 641
KLA+A+ +L +PPG PIR+ KNLR+C D H+A YIS I + EI++RD+ RFH FKNG C
Sbjct: 768 KLALAYAILTLPPGAPIRITKNLRICGDFHSAITYISMIVEHEIILRDSSRFHQFKNGSC 827
Query: 642 SCGDFW 647
SC +W
Sbjct: 828 SCKGYW 833
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 242/509 (47%), Gaps = 79/509 (15%)
Query: 2 PFHDGVSWNLLISGHASH-GSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
P H V W + HA H S N A++++ M K TF + +L
Sbjct: 86 PSHSSVYWWNQLIRHALHFNSPNTALRLFRRM-KTLHWTPDHYTFPFVFKACGEISNFEL 144
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G IHG +++ GF S VFV + ++ MY K + A++ FDEL + I
Sbjct: 145 GASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGIC----------- 193
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL-EGLAMDQFTFGS 179
DS++W ++++ + A+ LFREM + G+ D +
Sbjct: 194 -----------------DSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVN 236
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L CG L G+Q+H F +R+ ++VFVG+ALVDMY KC ++ A VF M +K+
Sbjct: 237 ILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKD 296
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE--------------------------- 272
VV+W AM+ GY QNG E+A+ +F M+ IE
Sbjct: 297 VVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFR 356
Query: 273 --------PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL-------ISFITVSNALV 317
P+ TL S++S+CA++ +L G + H S+ L + V NAL+
Sbjct: 357 QMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALI 416
Query: 318 TFYGKCGNIEDSHRLFNEM--NVRDEVSWTALVSGYAKFGKANETIDLFEKM--LSHGLK 373
Y KC ++E + +F+E+ RD V+WT ++ GYA+ G AN + LF +M + + +
Sbjct: 417 DMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIV 476
Query: 374 PDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI-RPIHDHYTCMIDILSRAGRLEEAK 432
P++ T+ VL AC+R ++ G+ +++ I + C+ID+ S++G ++ A+
Sbjct: 477 PNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQ 536
Query: 433 SFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+ M +A+ W +LL+ +HG E
Sbjct: 537 VVFDSMS-KRNAVSWTSLLTGYGMHGRSE 564
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 190/368 (51%), Gaps = 31/368 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSR----R 56
M F D V+WN +++G++ +G DA+ ++ M ++ + + +T+S+++ + R
Sbjct: 292 MRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIES-DVVTWSSVISGYAQRGFGCE 350
Query: 57 CVDLGRQIHGHILKFGFGSYVFVGSPLVD----MYAKLGLIYDAK---RGFDELPEKNIV 109
+D+ RQ+ G + + + + S ++ K Y K +G ++
Sbjct: 351 AMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLA 410
Query: 110 MYNTMITGLLRRGLVEESRRLFRGM--KDKDSISWTTMITGLMQNGLEREAIDLFREM-R 166
+ N +I + +E +R +F + KD+D ++WT MI G Q+G A+ LF EM +
Sbjct: 411 VINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFK 470
Query: 167 LEG-LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDN--VFVGSALVDMYCKCK 223
++ + + FT VL AC L AL+ GKQIHA+++R D+ +FV + L+DMY K
Sbjct: 471 IDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSG 530
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
+ A+ VF +M+ +N VSWT++L GYG +G SE+A ++F M++ + D T V+
Sbjct: 531 DVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLY 590
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEV 342
+C++ G F G+ + +V G+ G + ++ RL N+M + V
Sbjct: 591 ACSH-----SGMDF-------GVDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPV 638
Query: 343 SWTALVSG 350
W AL+S
Sbjct: 639 VWIALLSA 646
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 245/600 (40%), Positives = 354/600 (59%), Gaps = 33/600 (5%)
Query: 49 LIMSSSR-RCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKN 107
L++S +R R + G+QIH HI+K G V L++ Y+K +LP
Sbjct: 60 LLLSQTRSRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSK-----------TQLP--- 105
Query: 108 IVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL 167
LL + EES R K S +W+++I+ QN AI F M
Sbjct: 106 ----------LLSSQVFEESER-------KSSTTWSSVISSFAQNEEPVLAIQYFCRMIG 148
Query: 168 EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY 227
E L D F S AC L + GK +H +I+ + +VFVGS+LVDMY KC IK
Sbjct: 149 ENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKE 208
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN 287
A +VF M +NVVSW+ M+ GY Q G EEA+++F G++ +DFTL SVI C +
Sbjct: 209 ARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGS 268
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
LE G Q HG T V ++L++ Y KCG IE ++R+F+E+ +++ W A+
Sbjct: 269 ATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAM 328
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYG 407
+ A+ E DLF KM + G++P+ +T + VL ACS AGLVE+G+ YF +M K+Y
Sbjct: 329 LIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACSHAGLVEEGKKYFALM-KKYE 387
Query: 408 IRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAA 467
I P HY M+D+L RAG+L+EA S I MP P W ++ CRIHGN ++ +AA
Sbjct: 388 IEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTESVWGAFITGCRIHGNTDLAAFAA 447
Query: 468 ESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF 527
+ + EL + +V+LS+ YA+ G+++ ++ R+ +R++GV+K+ G SWI+ +RVH F
Sbjct: 448 DKVFELGAVSSGLHVMLSNAYAAAGRYEDAAKARKMLRDRGVKKETGLSWIEEGNRVHKF 507
Query: 528 SADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAF 587
+A D +IY +LE L +M + GYV D S VL +V EK + + +HSE+LAIAF
Sbjct: 508 AAGDRFHVRMKEIYQKLEDLGEEMERAGYVADTSFVLREVGSEEKNQTIRYHSERLAIAF 567
Query: 588 GLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
GL+ IP G PIR++KNLRVC DCHNA K+ISK++ R I+VRD RFH F++G+CSC D+W
Sbjct: 568 GLISIPLGRPIRIMKNLRVCGDCHNAIKFISKLSGRVIIVRDNNRFHRFEDGKCSCADYW 627
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 121/250 (48%), Gaps = 33/250 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW+ +I G+ G +A++++ L +GL +++ T S+++ + S ++L
Sbjct: 216 MPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGL-DVNDFTLSSVIRVCGSATLLEL 274
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIHG K + FVGS L+ +Y+K GLI A R FDE+P KN+ M+N
Sbjct: 275 GKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWN-------- 326
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
M+ Q+ +EA DLF +M G+ + TF V
Sbjct: 327 -----------------------AMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCV 363
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC +EEGK+ A + + + + +++VD+ + ++ A SV + M +
Sbjct: 364 LYACSHAGLVEEGKKYFALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPT 423
Query: 241 VS-WTAMLVG 249
S W A + G
Sbjct: 424 ESVWGAFITG 433
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/632 (37%), Positives = 355/632 (56%), Gaps = 65/632 (10%)
Query: 50 IMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIV 109
+ S++R+ L +++H I+K G + + + L++ Y K GLI
Sbjct: 11 LCSAARQSPLLAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLI---------------- 54
Query: 110 MYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG 169
+++ +LF + +D ++W +++T + A+ + R + G
Sbjct: 55 ---------------QDALQLFDALPRRDPVAWASLLTACNLSNRPHRALSISRSLLSTG 99
Query: 170 LAMDQFTFGSVLTACG--GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY 227
D F F S++ AC G+L +++GKQ+HA + D+ V S+L+DMY K Y
Sbjct: 100 FHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDDVVKSSLIDMYAKFGLPDY 159
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIF------------------------ 263
+VF +++ N +SWT M+ GY ++G EA ++F
Sbjct: 160 GRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNG 219
Query: 264 -------CNMQRNGIE-PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNA 315
M+ GI D L SV+ +CANLA E G Q HG + G S + +SNA
Sbjct: 220 VDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQMHGVVITLGYESCLFISNA 279
Query: 316 LVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPD 375
L+ Y KC ++ + +F EM +D VSWT+++ G A+ G+A E + L+++M+ G+KP+
Sbjct: 280 LIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPN 339
Query: 376 EVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFI 435
EVT +G++ ACS AGLV KGR F MV+++GI P HYTC++D+ SR+G L+EA++ I
Sbjct: 340 EVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLI 399
Query: 436 NKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWD 495
MP PD WA LLSSC+ HGN ++ A+ LL L P +P+SY+LLS+IYA G W+
Sbjct: 400 RTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLNLKPEDPSSYILLSNIYAGAGMWE 459
Query: 496 HVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEG 555
VS++R+ M +K PG S I H+F A + S P D+I + +L+ +M K G
Sbjct: 460 DVSKVRKLMMTLEAKKAPGYSCIDLGKGSHVFYAGETSHPMRDEIIGLMRELDEEMRKRG 519
Query: 556 YVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATK 615
Y PD SSVLHD++ EK + L HSE+LA+A+GLL PG IR+VKNLRVC DCH K
Sbjct: 520 YAPDTSSVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTVIRIVKNLRVCGDCHTVLK 579
Query: 616 YISKITQREILVRDAVRFHLFKNGECSCGDFW 647
IS IT REI VRDA R+H FK+G CSC DFW
Sbjct: 580 LISAITNREIYVRDAKRYHHFKDGNCSCNDFW 611
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 208/395 (52%), Gaps = 20/395 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D V+W L++ + A+ + +L G + F++++ + C +L
Sbjct: 64 LPRRDPVAWASLLTACNLSNRPHRALSISRSLLSTGF-HPDHFVFASLV-----KACANL 117
Query: 61 G-------RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNT 113
G +Q+H F V S L+DMYAK GL + FD + N + + T
Sbjct: 118 GVLHVKQGKQVHARFFLSPFSDDDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTT 177
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM- 172
MI+G R G E+ RLFR ++ +WT +I+GL+Q+G +A LF EMR EG+++
Sbjct: 178 MISGYARSGRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVT 237
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
D SV+ AC L E GKQ+H +I ++ +F+ +AL+DMY KC + A+ +F
Sbjct: 238 DPLVLSSVVGACANLALWELGKQMHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIF 297
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
M K+VVSWT+++VG Q+G +EEA+ ++ M G++P++ T +I +C++ +
Sbjct: 298 CEMCRKDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVS 357
Query: 293 EGTQFHGRSLVT--GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVS 349
+G R++V G+ + L+ + + G+++++ L M V DE +W AL+S
Sbjct: 358 KGRTLF-RTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLS 416
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
+ G + + + +L+ LKP++ + +LS
Sbjct: 417 SCKRHGNTQMAVRIADHLLN--LKPEDPSSYILLS 449
>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 765
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/646 (35%), Positives = 378/646 (58%), Gaps = 37/646 (5%)
Query: 4 HDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQ 63
D SW+ +IS + G +++AV+++ ML G+ S I FST+++ + +DLG+Q
Sbjct: 155 QDLSSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNSSI-FSTLIMSFTDPSMLDLGKQ 213
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
IH +++ GF + + + + + +MY K G + A+ +++ KN
Sbjct: 214 IHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKN---------------- 257
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
+++ T ++ G + R+A+ LF +M EG+ +D F F +L A
Sbjct: 258 ---------------AVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKA 302
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C L L GKQIH++ I+ + V VG+ LVD Y KC + A F ++ N SW
Sbjct: 303 CAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSW 362
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
+A++ GY Q+G + A+++F ++ G+ + F ++ +C+ ++ L G Q H ++
Sbjct: 363 SALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIK 422
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
GL+++++ +A+++ Y KCG ++ +H+ F ++ D V+WTA++ +A GKA E + L
Sbjct: 423 KGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRL 482
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F++M G++P+ VT IG+L+ACS +GLV++G+ + M EYG+ P DHY CMID+ S
Sbjct: 483 FKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYS 542
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
RAG L+EA I +PF PD + W +LL C H N+EIG AA+++ LDP + A+YV+
Sbjct: 543 RAGLLQEALEVIRSLPFEPDVMSWKSLLGGCWSHRNLEIGMIAADNIFRLDPLDSATYVI 602
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
+ ++YA GKWD +Q R+ M E+ +RK+ CSWI K +VH F D P ++QIY++
Sbjct: 603 MFNLYALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSK 662
Query: 544 LEKLN--RKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVV 601
L++LN K KE + + +++ + +E+ + L HSE+LAIA+GL+ PI V
Sbjct: 663 LKELNFSFKKSKERLLNEENAL---CDFTERKEQLLDHSERLAIAYGLICTAADTPIMVF 719
Query: 602 KNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KN R C DCH+ K +S +T RE++VRD RFH +GECSC D+W
Sbjct: 720 KNTRSCKDCHDFAKRVSIVTGRELVVRDGNRFHHINSGECSCRDYW 765
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 177/379 (46%), Gaps = 5/379 (1%)
Query: 83 LVDMYAKLGLIYDAK---RGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDS 139
L M LG + D K + N + N ++ + R F + D+D
Sbjct: 98 LFKMCGTLGALSDGKLFHNRLQRMANSNKFIDNCILKMYCDCKSFTSAERFFDKIVDQDL 157
Query: 140 ISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAF 199
SW+T+I+ + G EA+ LF M G+ + F +++ + L+ GKQIH+
Sbjct: 158 SSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQ 217
Query: 200 IIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEA 259
+IR N+ + + + +MY KC + AE M KN V+ T ++VGY + + +A
Sbjct: 218 LIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLMVGYTKAARNRDA 277
Query: 260 VKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTF 319
+ +F M G+E D F ++ +CA L L G Q H + GL S ++V LV F
Sbjct: 278 LLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDF 337
Query: 320 YGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTL 379
Y KC E + + F ++ ++ SW+AL++GY + G+ + +++F+ + S G+ +
Sbjct: 338 YVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIY 397
Query: 380 IGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP 439
+ ACS + G +K+ G+ + MI + S+ G+++ A +
Sbjct: 398 TNIFQACSAVSDLICGAQIHADAIKK-GLVAYLSGESAMISMYSKCGQVDYAHQAFLTID 456
Query: 440 FPPDAIGWATLLSSCRIHG 458
PD + W ++ + HG
Sbjct: 457 -KPDTVAWTAIICAHAYHG 474
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 150/307 (48%), Gaps = 3/307 (0%)
Query: 146 ITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH 205
+ L + G RE + R M G++++ ++ + CG L AL +GK H + R +
Sbjct: 64 LISLAKQGNLREVHEFIRNMDKVGISINPRSYEYLFKMCGTLGALSDGKLFHNRLQRMAN 123
Query: 206 KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCN 265
N F+ + ++ MYC CKS AE F + +++ SW+ ++ Y + G +EAV++F
Sbjct: 124 S-NKFIDNCILKMYCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLR 182
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M GI P+ ++I S + + L+ G Q H + + G + I++ + Y KCG
Sbjct: 183 MLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGW 242
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
++ + N+M ++ V+ T L+ GY K + + + LF KM+S G++ D +L A
Sbjct: 243 LDGAEVATNKMTRKNAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKA 302
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
C+ G + G+ +K G+ T ++D + R E A+ + P D
Sbjct: 303 CAALGDLYTGKQIHSYCIK-LGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPND-F 360
Query: 446 GWATLLS 452
W+ L++
Sbjct: 361 SWSALIA 367
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/527 (42%), Positives = 332/527 (62%), Gaps = 39/527 (7%)
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNG-LEREAIDLFREMRLEGLAMDQFTFGSV 180
G V++SR++F M + + +SWT +IT +Q+G ++EAI+LF +M S
Sbjct: 9 GSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMI------------SA 56
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
C VG++L+ MY + ++ A F + KN+
Sbjct: 57 SVNC--------------------------VGNSLISMYARSGRMEDARKAFDILFEKNL 90
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VS+ A++ GY +N SEEA +F + GI FT S++S A++ ++ +G Q HGR
Sbjct: 91 VSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGR 150
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
L G S + NAL++ Y +CGNIE + ++FNEM R+ +SWT++++G+AK G A
Sbjct: 151 LLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRA 210
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+++F KML G KP+E+T + VLSACS G++ +G+ +F M KE+GI P +HY CM+D
Sbjct: 211 LEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVD 270
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L R+G L EA FIN MP DA+ W TLL +CR+HGN E+G+ AAE +LE +P +PA+
Sbjct: 271 LLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAA 330
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
Y+LLS+++AS G+W V ++R++M+E+ + K+ GCSWI+ ++RVH F + S P + QI
Sbjct: 331 YILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQI 390
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y EL++L K+ + GY+PD VLHD+E +K + L HSEK+A+AFGL+ PIR+
Sbjct: 391 YQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRI 450
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCH A KYIS T REI+VRD+ RFH KNG CSC D+W
Sbjct: 451 FKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 497
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 166/335 (49%), Gaps = 42/335 (12%)
Query: 17 ASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSY 76
A+ GSV+D+ KV+ M + + + + I + + + ++L K S
Sbjct: 6 AADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIEL-------FCKMISASV 58
Query: 77 VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKD 136
VG+ L+ MYA+ G + DA++ FD L EKN+V YN ++ G +
Sbjct: 59 NCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK---------------- 102
Query: 137 KDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQI 196
N EA LF E+ G+ + FTF S+L+ + A+ +G+QI
Sbjct: 103 ---------------NLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQI 147
Query: 197 HAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCS 256
H +++ +K N + +AL+ MY +C +I+ A VF M +NV+SWT+M+ G+ ++G +
Sbjct: 148 HGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFA 207
Query: 257 EEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT--GLISFITVSN 314
A+++F M G +P++ T +V+S+C+++ + EG Q H S+ G++ +
Sbjct: 208 TRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEG-QKHFNSMYKEHGIVPRMEHYA 266
Query: 315 ALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALV 348
+V G+ G + ++ N M + D + W L+
Sbjct: 267 CMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 301
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 98/189 (51%), Gaps = 32/189 (16%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VS+N ++ G+A + +A ++N + G+G +S TF+++L ++S + G QIHG
Sbjct: 91 VSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG-ISAFTFASLLSGAASIGAMGKGEQIHG 149
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+LK G+ S + + L+ MY++ G I E
Sbjct: 150 RLLKGGYKSNQCICNALISMYSRCGNI-------------------------------EA 178
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+ ++F M+D++ ISWT+MITG ++G A+++F +M G ++ T+ +VL+AC
Sbjct: 179 AFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSH 238
Query: 187 LLALEEGKQ 195
+ + EG++
Sbjct: 239 VGMISEGQK 247
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/652 (36%), Positives = 368/652 (56%), Gaps = 44/652 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRC--- 57
M D V+WN +I G+A G +VK++ M+ + ++ IT S+ R C
Sbjct: 283 MAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFVPDMLSIT-------STIRACGQS 335
Query: 58 --VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
+ +G+ +H +++ GF + L+DMYAK G + A+ FD
Sbjct: 336 GDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDT------------- 382
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
K KDS++W ++I G Q+G +E ++ F+ M++E D
Sbjct: 383 ------------------TKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKP-DSV 423
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
TF +L+ L + +G+ IH +I+ + + +G++L+D+Y KC + VF M
Sbjct: 424 TFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYM 483
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
+ +++SW ++ ++ M+ G+ PD+ T+ ++ C+ LA +G
Sbjct: 484 SAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGK 543
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
+ HG +G S + + NAL+ Y KCG++E+ ++F M +D V+WTAL+S + +G
Sbjct: 544 EIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYG 603
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
+ + + F+ M G+ PD V I + ACS +G+V++G +F+ M +Y + P +HY
Sbjct: 604 EGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHY 663
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
C++D+L+R+G L +A+ FI MP PDA W LLS+CR GN I + ++ +LEL+
Sbjct: 664 ACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNS 723
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSP 535
+ YVL+S+IYA+ GKWD V +R +M+ KG++K+PG SWI+ + RV++F D S
Sbjct: 724 DDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFE 783
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
D++ LE L R M KEGYV D+ LHDVE +K ML HSE+LAIAFGLL PG
Sbjct: 784 QYDKVKDLLEYLVRLMAKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLNTKPG 843
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
P+ V+KNLRVC DCH TKYI+KI QREILVRDA RFH FK+G CSCGD W
Sbjct: 844 SPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHRFKDGACSCGDHW 895
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 228/454 (50%), Gaps = 40/454 (8%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL- 60
P ++ WN +I +G A+ Y M + L TF + +++S R +DL
Sbjct: 82 PTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKL-QPDAFTFPS--VINSCARILDLE 138
Query: 61 -GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G +H H ++ GF S +++G+ L+DMY++ F +L
Sbjct: 139 LGCIVHEHAMEMGFESDLYIGNALIDMYSR----------FVDL---------------- 172
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ +R +F M ++DS+SW ++I+G NG +A+D++ + R+ G+ D FT S
Sbjct: 173 -----DNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSS 227
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL ACG L+A++EG +H I + +V +G+ L+ MY K + ++ A VF MA K+
Sbjct: 228 VLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKD 287
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
V+W M+ GY Q G E +VK+F +M +G PD ++ S I +C L+ G H
Sbjct: 288 SVTWNTMICGYAQLGRHEASVKLFMDMI-DGFVPDMLSITSTIRACGQSGDLQVGKFVHK 346
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ +G N L+ Y KCG++ + +F+ +D V+W +L++GY + G E
Sbjct: 347 YLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKE 406
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
++ F KM+ KPD VT + +LS S+ + +GR ++K +G ++
Sbjct: 407 GLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIK-FGFEAELIIGNSLL 464
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
D+ ++ G +++ + M D I W T+++S
Sbjct: 465 DVYAKCGEMDDLLKVFSYMS-AHDIISWNTVIAS 497
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 136/491 (27%), Positives = 230/491 (46%), Gaps = 41/491 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSWN LISG+ S+G DA+ +Y+ G+ T S++L+ S V
Sbjct: 182 MSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVP-DCFTMSSVLLACGSLMAVKE 240
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +HG I K G V +G+ L+ MY K + +A+R F ++ K+ V +NTMI G +
Sbjct: 241 GVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQ 300
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G E S +LF M ++G D + S
Sbjct: 301 LGRHEASVKLFMDM--------------------------------IDGFVPDMLSITST 328
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ ACG L+ GK +H ++I + + + + L+DMY KC + A+ VF T K+
Sbjct: 329 IRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDS 388
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+W +++ GY Q+G +E ++ F M + +PD T ++S + LA + +G H
Sbjct: 389 VTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCD 447
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ G + + + N+L+ Y KCG ++D ++F+ M+ D +SW +++ F
Sbjct: 448 VIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVG 507
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ +M + GL PDE T++G+L CS + +G+ + K G +I+
Sbjct: 508 FQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKS-GFESNVPIGNALIE 566
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL--LELDPYNP 478
+ S+ G LE M D + W L+S+ ++G GK A ++ +EL P
Sbjct: 567 MYSKCGSLENCIKVFKYMK-EKDVVTWTALISAFGMYGE---GKKALKAFQDMELSGVLP 622
Query: 479 ASYVLLSSIYA 489
S ++ I+A
Sbjct: 623 DSVAFIAFIFA 633
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 201/367 (54%), Gaps = 10/367 (2%)
Query: 127 SRRLFRGMKDKDSIS-WTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
S +FR + +++ W ++I L NGL +A+ + EMR + L D FTF SV+ +C
Sbjct: 73 SVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCA 132
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
+L LE G +H + + ++++G+AL+DMY + + A VF M+ ++ VSW +
Sbjct: 133 RILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNS 192
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
++ GY NG E+A+ ++ + G+ PD FT+ SV+ +C +L +++EG HG G
Sbjct: 193 LISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIG 252
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
+ + + N L++ Y K + ++ R+F++M V+D V+W ++ GYA+ G+ ++ LF
Sbjct: 253 IAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFM 312
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC--MIDILS 423
M+ G PD +++ + AC ++G ++ G+ + ++ G D C +ID+ +
Sbjct: 313 DMID-GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLI---GSGFECDTVACNILIDMYA 368
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL-LELDPYNPASYV 482
+ G L A+ + D++ W +L++ G + G + + + +E P + ++V
Sbjct: 369 KCGDLLAAQEVFDTTK-CKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKP-DSVTFV 426
Query: 483 LLSSIYA 489
LL SI++
Sbjct: 427 LLLSIFS 433
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 148/302 (49%), Gaps = 8/302 (2%)
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
+F S+L + + +H+ II + +V L+ Y + K + SVFR
Sbjct: 19 EFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFR 78
Query: 234 TMA-WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
+++ NV W +++ NG +A+ + M+ ++PD FT SVI+SCA + LE
Sbjct: 79 SISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLE 138
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
G H ++ G S + + NAL+ Y + +++++ +F EM+ RD VSW +L+SGY
Sbjct: 139 LGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYC 198
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
G + +D++ K G+ PD T+ VL AC V++G + +++ GI
Sbjct: 199 SNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGV-IEKIGIAGDV 257
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLE 472
++ + + RL EA+ +KM D++ W T+ I G ++G+ A L
Sbjct: 258 IIGNGLLSMYFKFERLREARRVFSKMAV-KDSVTWNTM-----ICGYAQLGRHEASVKLF 311
Query: 473 LD 474
+D
Sbjct: 312 MD 313
>gi|125577630|gb|EAZ18852.1| hypothetical protein OsJ_34389 [Oryza sativa Japonica Group]
Length = 587
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/590 (38%), Positives = 344/590 (58%), Gaps = 33/590 (5%)
Query: 60 LGRQIHGHILKFGFGSY-VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
+G QIH ++FG+ FV +DMY K G + A+ F E+P
Sbjct: 29 IGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMP-------------- 74
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+++ ++W ++T + +G E I+ + +R G + +
Sbjct: 75 -----------------NRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSAC 117
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
+ AC G + L G+Q H F+++ + +V V +++VD Y KC+ A +VF M +
Sbjct: 118 AFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVR 177
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
N VSW +M+ Y QNG EEA + +R+G EP DF + S +++CA L L G H
Sbjct: 178 NSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALH 237
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
++ + + + I V++ALV YGKCG +ED+ ++F E R+ V+W A++ GYA G A
Sbjct: 238 AVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQ 297
Query: 359 ETIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
+ +F+ M+ G P+ +TL+ V+++CSR GL + G FE M + +GI P +HY C
Sbjct: 298 NALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYAC 357
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
++D+L RAG E+A I MP P W LL +C++HG E+G+ AAE L ELDP +
Sbjct: 358 VVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQD 417
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
++VLLS+++AS G+W + +R+ M+ G++KDPGCSW+ +K+ VH+F A D
Sbjct: 418 SGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMY 477
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
++I A L KL ++M GY+PD L+D+E EK + HSEKLA+AFGL+ IPPG+P
Sbjct: 478 NEIQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVP 537
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
IR++KNLR+C DCH A K+IS I REI+VRD RFH FK +CSCGD+W
Sbjct: 538 IRIMKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDYW 587
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 160/359 (44%), Gaps = 35/359 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+WN +++ G + ++ Y L++ G + ++ + + L
Sbjct: 73 MPNRNVVAWNAVMTNAVLDGRPLETIEAY-FGLREAGGLPNVVSACAFFNACAGAMYLSL 131
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q HG ++K GF V V + +VD Y K A+ FD + +N V + +M
Sbjct: 132 GEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSM------ 185
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ QNG E EA + R G F S
Sbjct: 186 -------------------------VAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSA 220
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LT C GLL L G+ +HA +R+ N+FV SALVDMY KC ++ AE +F +N+
Sbjct: 221 LTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNL 280
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQ-FH 298
V+W AM+ GY G ++ A+ +F +M R+G P+ TL +VI+SC+ ++G + F
Sbjct: 281 VTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFE 340
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGK 356
G+ +V G+ G E ++ + M +R +S W AL+ GK
Sbjct: 341 TMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGK 399
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 156/349 (44%), Gaps = 18/349 (5%)
Query: 169 GLAMDQFTFGSVLTACGGLLALEE-GKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIK 226
GL + FTF S A G QIH+ IR + + FV A +DMY K +K
Sbjct: 5 GLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLK 64
Query: 227 YAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCA 286
A +F M +NVV+W A++ +G E ++ + ++ G P+ + + ++CA
Sbjct: 65 LARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACA 124
Query: 287 NLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTA 346
L G QFHG + G ++V N++V FYGKC + +F+ M VR+ VSW +
Sbjct: 125 GAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCS 184
Query: 347 LVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY 406
+V+ YA+ G E + G +P + + L+ C+ + GR + V+
Sbjct: 185 MVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSC 244
Query: 407 GIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWA 466
I + ++D+ + G +E+A+ + P + + W + I G IG A
Sbjct: 245 IDANIFVA-SALVDMYGKCGCVEDAEQIFYETP-QRNLVTWNAM-----IGGYAHIGD-A 296
Query: 467 AESLLELDPY-----NPASYVLLSSIYAS---KGKWDHVSQLRRTMREK 507
+LL D +Y+ L ++ S G +L TMRE+
Sbjct: 297 QNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRER 345
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 90/198 (45%), Gaps = 4/198 (2%)
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEE-GTQFHGRSLVTGLISFIT-VSNALVTFYGKC 323
M R G+ P+DFT S + A+ G Q H ++ G + VS A + Y K
Sbjct: 1 MLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKT 60
Query: 324 GNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVL 383
G ++ + LF EM R+ V+W A+++ G+ ETI+ + + G P+ V+
Sbjct: 61 GRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFF 120
Query: 384 SACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPD 443
+AC+ A + G + +VK G M+D + +A++ + M +
Sbjct: 121 NACAGAMYLSLGEQFHGFVVK-CGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGV-RN 178
Query: 444 AIGWATLLSSCRIHGNVE 461
++ W +++++ +G E
Sbjct: 179 SVSWCSMVAAYAQNGAEE 196
>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
Length = 562
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 232/590 (39%), Positives = 347/590 (58%), Gaps = 34/590 (5%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR+IH + GF + LV MYAK G +
Sbjct: 4 GRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCL--------------------------- 36
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG-LAMDQFTFGS 179
+E+R +F G+ ++ +SW+ MI +G +EA+ LF MR +G + + TF
Sbjct: 37 ----DEARAIFNGILERTVVSWSAMIGAYALHGRGQEALLLFHRMRNDGRVEPNAMTFTG 92
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
V ACG + LE+G++IHA + + N + +AL++MY +C S++ A VF TM
Sbjct: 93 VFNACGVIEDLEQGREIHALAMASGELKSSNAILENALLNMYVRCGSLEEARKVFDTMDH 152
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
+ SWT+M+ +N EA+++F M GI P TL SV+++CA +L+ G Q
Sbjct: 153 PDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLASVLNACACSGALKVGKQI 212
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H R +G S + AL+ Y KCG++E S ++F M R+ VSWTA+++ A+ G+
Sbjct: 213 HSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALAQHGQG 272
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
+E ++LF++M G+ D T I VL ACS AGL+++ +F MV++Y I P HY
Sbjct: 273 DEALELFKEMNLEGMVADATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCR 332
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
+D + RAGRL++A+ I+ MPF P+ + W TLL++CRIH E AE L +L P +
Sbjct: 333 ALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNACRIHSQAERATKVAELLSKLAPED 392
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
+Y LL ++YA+ G++ ++R+ M ++G++K PG S+I+ K++VH F A D + P
Sbjct: 393 SMAYTLLGNVYAATGRYGDQMRVRKGMTDRGLKKVPGKSFIEVKNKVHEFVAGDRAHPSR 452
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
D+I ELEKL +M + GYVP+ VLH V EK +++ HSEKLAIAFGL+ PPG P
Sbjct: 453 DEILLELEKLGGRMREAGYVPNTKDVLHAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTP 512
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ +VKNLRVCSDCH ATK I+KI +R I+VRD RFH F++G+CSC D+W
Sbjct: 513 LLIVKNLRVCSDCHAATKVIAKIMRRRIVVRDTHRFHHFEDGQCSCKDYW 562
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 194/395 (49%), Gaps = 47/395 (11%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW+ +I +A HG +A+ +++ M DG + +TF+ + ++ GR+IH
Sbjct: 52 VSWSAMIGAYALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHA 111
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+ G EL N ++ N ++ +R G +EE
Sbjct: 112 LAMASG-----------------------------ELKSSNAILENALLNMYVRCGSLEE 142
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+R++F M D+ SWT+MIT +N EA++LF M LEG+ T SVL AC
Sbjct: 143 ARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLASVLNACAC 202
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
AL+ GKQIH+ + + +V +AL+DMY KC S++ + VF M +N VSWTAM
Sbjct: 203 SGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAM 262
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ Q+G +EA+++F M G+ D T V+ +C++ ++E +F S+V
Sbjct: 263 IAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKESLEFF-HSMVEDY 321
Query: 307 ISFITVSN---ALVTFYGKCGNIEDSHRLFNEMNVRDE-VSWTALVSG---YAKFGKANE 359
T ++ AL T G+ G ++D+ L + M E ++W L++ +++ +A +
Sbjct: 322 AIAPTETHYCRALDTI-GRAGRLQDAEELIHSMPFHPETLTWKTLLNACRIHSQAERATK 380
Query: 360 TIDLFEKMLSHGLKPDE---VTLIG-VLSACSRAG 390
+L K L P++ TL+G V +A R G
Sbjct: 381 VAELLSK-----LAPEDSMAYTLLGNVYAATGRYG 410
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 89/166 (53%), Gaps = 3/166 (1%)
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
+EEG + H R + G N LV+ Y KCG ++++ +FN + R VSW+A++
Sbjct: 1 MEEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGA 60
Query: 351 YAKFGKANETIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
YA G+ E + LF +M + G ++P+ +T GV +AC +E+GR + + ++
Sbjct: 61 YALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELK 120
Query: 410 PIHDHY-TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
+ ++++ R G LEEA+ + M PDA W +++++C
Sbjct: 121 SSNAILENALLNMYVRCGSLEEARKVFDTMDH-PDAFSWTSMITAC 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 142/334 (42%), Gaps = 56/334 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D SW +I+ + + +A+++++ M +G+ S +T +++L + + +
Sbjct: 150 MDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTS-VTLASVLNACACSGALKV 208
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIH + GF S V + L+DMYAK G + + + F + +N V + MI L
Sbjct: 209 GKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAAL-- 266
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
Q+G EA++LF+EM LEG+ D TF V
Sbjct: 267 -----------------------------AQHGQGDEALELFKEMNLEGMVADATTFICV 297
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYC-------KCKSIKYAESVFR 233
L AC ++E + ++ + + + YC + ++ AE +
Sbjct: 298 LRACSHAGLIKESLEFFHSMVED------YAIAPTETHYCRALDTIGRAGRLQDAEELIH 351
Query: 234 TMAW-KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDD---FT-LGSVISSCANL 288
+M + ++W +L + +E A K+ + + + P+D +T LG+V ++
Sbjct: 352 SMPFHPETLTWKTLLNACRIHSQAERATKVAELLSK--LAPEDSMAYTLLGNVYAATGRY 409
Query: 289 AS---LEEGTQFHGRSLVTGLISFITVSNALVTF 319
+ +G G V G SFI V N + F
Sbjct: 410 GDQMRVRKGMTDRGLKKVPG-KSFIEVKNKVHEF 442
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 252/652 (38%), Positives = 392/652 (60%), Gaps = 26/652 (3%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + +SWN L+SG+ ++G +N+A +V++ M + + ++++ M+ +
Sbjct: 155 MSERNTISWNGLVSGYINNGMINEAREVFDRMPERNV-----VSWTAMVRGYVKEGMISE 209
Query: 61 GRQIHGHILKFGFGSY-VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+ + + S+ V +G L + G I +A R FD +PEK++V MI G
Sbjct: 210 AETLFWQMPEKNVVSWTVMLGGLLQE-----GRIDEACRLFDMMPEKDVVTRTNMIGGYC 264
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ G + E+R LF M ++ +SWTTMITG +QN + +D+ R++ ++ ++ +
Sbjct: 265 QVGRLVEARMLFDEMPRRNVVSWTTMITGYVQN----QQVDIARKLFEVMPEKNEVSWTA 320
Query: 180 VL---TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
+L T CG L E + +A I++ V +A++ + + + A VF M
Sbjct: 321 MLKGYTNCGRLD--EASELFNAMPIKS-----VVACNAMILCFGQNGEVPKARQVFDQMR 373
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
K+ +W+AM+ Y + G +A+++F MQR GI P+ +L SV+S CA LA+L+ G +
Sbjct: 374 EKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGRE 433
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H + + + + V++ L++ Y KCGN+ + ++F+ V+D V W ++++GYA+ G
Sbjct: 434 IHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGL 493
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
E + +F M G+ PD+VT +GVLSACS G V+KG F M +Y + +HY
Sbjct: 494 GVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYA 553
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY 476
CM+D+L RAG+L EA I KMP DAI W LL +CR H +++ + AA+ LL L+P
Sbjct: 554 CMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPK 613
Query: 477 NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS-P 535
N ++LLS+IYAS+G+WD V++LRR MR++ V K PGCSWI + +VH F+ D S P
Sbjct: 614 NAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHP 673
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
+I LE L+ + + GY PD S VLHDV+ EK++ L +HSEKLA+A+GLL IP G
Sbjct: 674 EHSEINRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIG 733
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+PIRV+KNLRVC DCH A K I+K+T REI++RDA RFH FK+G CSC D+W
Sbjct: 734 MPIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 204/414 (49%), Gaps = 37/414 (8%)
Query: 70 KFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRR 129
+F +++ + L+ Y++LG I A+ FDE+ +KNI+ +N+++ G + +E++
Sbjct: 91 RFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQN 150
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR---------------LEGL---- 170
+F M ++++ISW +++G + NG+ EA ++F M EG+
Sbjct: 151 MFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEA 210
Query: 171 -----AMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKS 224
M + S GGL L+EG+ A + + + +V + ++ YC+
Sbjct: 211 ETLFWQMPEKNVVSWTVMLGGL--LQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGR 268
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A +F M +NVVSWT M+ GY QN + A K+F M E ++ + +++
Sbjct: 269 LVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMP----EKNEVSWTAMLKG 324
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
N L+E ++ + +++ NA++ +G+ G + + ++F++M +DE +W
Sbjct: 325 YTNCGRLDEASELFNAMPIKSVVA----CNAMILCFGQNGEVPKARQVFDQMREKDEGTW 380
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
+A++ Y + G + ++LF M G++P+ +LI VLS C+ ++ GR +V+
Sbjct: 381 SAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVR 440
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
++ + ++ + + G L +AK ++ D + W ++++ HG
Sbjct: 441 SQFDLDVY-VASVLLSMYIKCGNLAKAKQVFDRFAV-KDVVMWNSIITGYAQHG 492
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 129/301 (42%), Gaps = 60/301 (19%)
Query: 213 SALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGI 271
++L+ Y + I+ A VF M KN++SW +++ GY QN +EA +F M +RN I
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTI 161
Query: 272 EPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHR 331
N LV+ Y G I ++
Sbjct: 162 S----------------------------------------WNGLVSGYINNGMINEARE 181
Query: 332 LFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGL 391
+F+ M R+ VSWTA+V GY K G +E LF +M + V L G+L + G
Sbjct: 182 VFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLL----QEGR 237
Query: 392 VEKGRHYFEIMVKEYGIRPIHD--HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
+++ F++M P D T MI + GRL EA+ ++MP + + W T
Sbjct: 238 IDEACRLFDMM-------PEKDVVTRTNMIGGYCQVGRLVEARMLFDEMP-RRNVVSWTT 289
Query: 450 LLSSCRIHGNVEIGKWAAESLLELDP-YNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
+++ + V+I A L E+ P N S+ + Y + G+ D S+L M K
Sbjct: 290 MITGYVQNQQVDI----ARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKS 345
Query: 509 V 509
V
Sbjct: 346 V 346
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 147/321 (45%), Gaps = 22/321 (6%)
Query: 193 GKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYG 251
G+ A ++ ++ +D N+ +++V Y + K + A+++F M+ +N +SW ++ GY
Sbjct: 112 GQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTISWNGLVSGYI 171
Query: 252 QNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFIT 311
NG EA ++F M + + +++ + E + ++S+
Sbjct: 172 NNGMINEAREVFDRMPERNV----VSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTV 227
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG 371
+ L+ + G I+++ RLF+ M +D V+ T ++ GY + G+ E LF++M
Sbjct: 228 MLGGLL----QEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRN 283
Query: 372 LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEA 431
+ V+ +++ + V+ R FE+M ++ + +T M+ + GRL+EA
Sbjct: 284 V----VSWTTMITGYVQNQQVDIARKLFEVMPEKNEV-----SWTAMLKGYTNCGRLDEA 334
Query: 432 KSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASK 491
N MP A +L N E+ K A + ++ + ++ + +Y K
Sbjct: 335 SELFNAMPIKSVVACNAMILC---FGQNGEVPK-ARQVFDQMREKDEGTWSAMIKVYERK 390
Query: 492 GKWDHVSQLRRTMREKGVRKD 512
G +L R M+ +G+R +
Sbjct: 391 GLELDALELFRMMQREGIRPN 411
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 101/228 (44%), Gaps = 38/228 (16%)
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
+FI N+L+T Y + G IE + +F+EM ++ +SW ++V+GY + + E ++F+KM
Sbjct: 96 NFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKM 155
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
+ ++ G++S G++ + R F+ M + + +T M+ + G
Sbjct: 156 SER----NTISWNGLVSGYINNGMINEAREVFDRMPERNVV-----SWTAMVRGYVKEGM 206
Query: 428 LEEAKSFINKMPFPPDAIGWATLL----------SSCR----------------IHGNVE 461
+ EA++ +MP + + W +L +CR I G +
Sbjct: 207 ISEAETLFWQMP-EKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQ 265
Query: 462 IGKWAAESLL--ELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREK 507
+G+ +L E+ N S+ + + Y + D +L M EK
Sbjct: 266 VGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEK 313
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 252/652 (38%), Positives = 392/652 (60%), Gaps = 26/652 (3%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + +SWN L+SG+ ++G +N+A +V++ M + + ++++ M+ +
Sbjct: 155 MSERNTISWNGLVSGYINNGMINEAREVFDRMPERNV-----VSWTAMVRGYVKEGMISE 209
Query: 61 GRQIHGHILKFGFGSY-VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+ + + S+ V +G L + G I +A R FD +PEK++V MI G
Sbjct: 210 AETLFWQMPEKNVVSWTVMLGGLLQE-----GRIDEACRLFDMMPEKDVVTRTNMIGGYC 264
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ G + E+R LF M ++ +SWTTMITG +QN + +D+ R++ ++ ++ +
Sbjct: 265 QVGRLVEARMLFDEMPRRNVVSWTTMITGYVQN----QQVDIARKLFEVMPEKNEVSWTA 320
Query: 180 VL---TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
+L T CG L E + +A I++ V +A++ + + + A VF M
Sbjct: 321 MLKGYTNCGRLD--EASELFNAMPIKS-----VVACNAMILCFGQNGEVPKARQVFDQMR 373
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
K+ +W+AM+ Y + G +A+++F MQR GI P+ +L SV+S CA LA+L+ G +
Sbjct: 374 EKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGRE 433
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H + + + + V++ L++ Y KCGN+ + ++F+ V+D V W ++++GYA+ G
Sbjct: 434 IHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGL 493
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
E + +F M G+ PD+VT +GVLSACS G V+KG F M +Y + +HY
Sbjct: 494 GVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYA 553
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY 476
CM+D+L RAG+L EA I KMP DAI W LL +CR H +++ + AA+ LL L+P
Sbjct: 554 CMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPK 613
Query: 477 NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS-P 535
N ++LLS+IYAS+G+WD V++LRR MR++ V K PGCSWI + +VH F+ D S P
Sbjct: 614 NAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHP 673
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
+I LE L+ + + GY PD S VLHDV+ EK++ L +HSEKLA+A+GLL IP G
Sbjct: 674 EHSEINRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIG 733
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+PIRV+KNLRVC DCH A K I+K+T REI++RDA RFH FK+G CSC D+W
Sbjct: 734 MPIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 204/414 (49%), Gaps = 37/414 (8%)
Query: 70 KFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRR 129
+F +++ + L+ Y++LG I A+ FDE+ +KNI+ +N+++ G + +E++
Sbjct: 91 RFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQN 150
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR---------------LEGL---- 170
+F M ++++ISW +++G + NG+ EA ++F M EG+
Sbjct: 151 MFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEA 210
Query: 171 -----AMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKS 224
M + S GGL L+EG+ A + + + +V + ++ YC+
Sbjct: 211 ETLFWQMPEKNVVSWTVMLGGL--LQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGR 268
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A +F M +NVVSWT M+ GY QN + A K+F M E ++ + +++
Sbjct: 269 LVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMP----EKNEVSWTAMLKG 324
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
N L+E ++ + +++ NA++ +G+ G + + ++F++M +DE +W
Sbjct: 325 YTNCGRLDEASELFNAMPIKSVVA----CNAMILCFGQNGEVPKARQVFDQMREKDEGTW 380
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
+A++ Y + G + ++LF M G++P+ +LI VLS C+ ++ GR +V+
Sbjct: 381 SAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVR 440
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
++ + ++ + + G L +AK ++ D + W ++++ HG
Sbjct: 441 SQFDLDVY-VASVLLSMYIKCGNLAKAKQVFDRFAV-KDVVMWNSIITGYAQHG 492
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 129/301 (42%), Gaps = 60/301 (19%)
Query: 213 SALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGI 271
++L+ Y + I+ A VF M KN++SW +++ GY QN +EA +F M +RN I
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTI 161
Query: 272 EPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHR 331
N LV+ Y G I ++
Sbjct: 162 S----------------------------------------WNGLVSGYINNGMINEARE 181
Query: 332 LFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGL 391
+F+ M R+ VSWTA+V GY K G +E LF +M + V L G+L + G
Sbjct: 182 VFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLL----QEGR 237
Query: 392 VEKGRHYFEIMVKEYGIRPIHD--HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
+++ F++M P D T MI + GRL EA+ ++MP + + W T
Sbjct: 238 IDEACRLFDMM-------PEKDVVTRTNMIGGYCQVGRLVEARMLFDEMP-RRNVVSWTT 289
Query: 450 LLSSCRIHGNVEIGKWAAESLLELDP-YNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
+++ + V+I A L E+ P N S+ + Y + G+ D S+L M K
Sbjct: 290 MITGYVQNQQVDI----ARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKS 345
Query: 509 V 509
V
Sbjct: 346 V 346
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 147/321 (45%), Gaps = 22/321 (6%)
Query: 193 GKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYG 251
G+ A ++ ++ +D N+ +++V Y + K + A+++F M+ +N +SW ++ GY
Sbjct: 112 GQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTISWNGLVSGYI 171
Query: 252 QNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFIT 311
NG EA ++F M + + +++ + E + ++S+
Sbjct: 172 NNGMINEAREVFDRMPERNV----VSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTV 227
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG 371
+ L+ + G I+++ RLF+ M +D V+ T ++ GY + G+ E LF++M
Sbjct: 228 MLGGLL----QEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRN 283
Query: 372 LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEA 431
+ V+ +++ + V+ R FE+M ++ + +T M+ + GRL+EA
Sbjct: 284 V----VSWTTMITGYVQNQQVDIARKLFEVMPEKNEV-----SWTAMLKGYTNCGRLDEA 334
Query: 432 KSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASK 491
N MP A +L N E+ K A + ++ + ++ + +Y K
Sbjct: 335 SELFNAMPIKSVVACNAMILC---FGQNGEVPK-ARQVFDQMREKDEGTWSAMIKVYERK 390
Query: 492 GKWDHVSQLRRTMREKGVRKD 512
G +L R M+ +G+R +
Sbjct: 391 GLELDALELFRMMQREGIRPN 411
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 101/228 (44%), Gaps = 38/228 (16%)
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
+FI N+L+T Y + G IE + +F+EM ++ +SW ++V+GY + + E ++F+KM
Sbjct: 96 NFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKM 155
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
+ ++ G++S G++ + R F+ M + + +T M+ + G
Sbjct: 156 SER----NTISWNGLVSGYINNGMINEAREVFDRMPERNVV-----SWTAMVRGYVKEGM 206
Query: 428 LEEAKSFINKMPFPPDAIGWATLL----------SSCR----------------IHGNVE 461
+ EA++ +MP + + W +L +CR I G +
Sbjct: 207 ISEAETLFWQMP-EKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQ 265
Query: 462 IGKWAAESLL--ELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREK 507
+G+ +L E+ N S+ + + Y + D +L M EK
Sbjct: 266 VGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEK 313
>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 770
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 248/664 (37%), Positives = 385/664 (57%), Gaps = 54/664 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNL-SRITFSTMLIMSSSRRCVD 59
MP + V+W LI+G+ + A++V+ MLK LG S T ML + +D
Sbjct: 139 MPEKNVVTWTALITGYTLNSQPVLALEVFVEMLK--LGRYPSDYTLGGMLSACVASHNID 196
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
LG+Q+HG+ +K+G S +G+ L +Y K G + R F +P
Sbjct: 197 LGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIP--------------- 241
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLERE-AIDLFREMRLEGLAM-DQFTF 177
DK+ I+WTTMI+ ++ E ++LF +M L+G M ++FT
Sbjct: 242 ----------------DKNVITWTTMISACAEDENYTELGLNLFLDM-LKGEVMPNEFTL 284
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
SV++ CG L + GKQ+ F + N+ V ++ + +Y + + A +F M
Sbjct: 285 TSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMED 344
Query: 238 KNVVSWTAMLVGYGQNGCSE-----------EAVKIFCNMQRNGIEPDDFTLGSVISSCA 286
+V++W AM+ G+ Q S +A+KIF ++ R+ ++PD FT S++S C+
Sbjct: 345 NSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCS 404
Query: 287 NLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTA 346
+ +LE+G Q H +++ TG +S + V++ALV Y KCG IE + + F EM R V+WT+
Sbjct: 405 TMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTS 464
Query: 347 LVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY 406
++SGY++ G+ ++ I LFE M+ G KP+E+T + +LSACS AGLVE+ YF++M EY
Sbjct: 465 MISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEY 524
Query: 407 GIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWA 466
I P+ DHY CMID+ R GRL++A +FI + F P+ W++L++ CR HGN+E+ +A
Sbjct: 525 HIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHGNMELAFYA 584
Query: 467 AESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREK--GVRKDPGCSWIKYKSRV 524
A+ LLEL P +YVLL ++Y S G+W V+++R+ + + G+ +D SWI + +V
Sbjct: 585 ADRLLELKPKVVETYVLLLNMYISTGRWRDVARVRKLSKHEDLGILRDR--SWITIRDKV 642
Query: 525 HIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKM--LNHHSEK 582
+ F ADD S P S ++Y LE L K GY P ++ L+D E K L HHSE+
Sbjct: 643 YFFKADDRSHPQSTELYQLLETLLEKAKAIGYEPYQNTELYDSEEDGKPAAGSLKHHSER 702
Query: 583 LAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECS 642
LA+A GLL PPG+ +R+ KN+ +C DCH++ K+ S + REI+VRD+ R H FK+G CS
Sbjct: 703 LAVALGLLKAPPGVTVRITKNITMCRDCHSSIKFFSLLANREIVVRDSKRLHKFKDGRCS 762
Query: 643 CGDF 646
CGDF
Sbjct: 763 CGDF 766
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 197/420 (46%), Gaps = 50/420 (11%)
Query: 56 RCVDLG-----RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVM 110
RC++ G + +HGH++K G +FV + LV++Y
Sbjct: 87 RCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVY----------------------- 123
Query: 111 YNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL 170
+R G +++R LF M +K+ ++WT +ITG N A+++F EM G
Sbjct: 124 --------MRCGNSQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGR 175
Query: 171 AMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAES 230
+T G +L+AC ++ GKQ+H + I+ +G++L +Y K +++
Sbjct: 176 YPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIR 235
Query: 231 VFRTMAWKNVVSWTAMLVGYGQN-GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
F+ + KNV++WT M+ ++ +E + +F +M + + P++FTL SV+S C
Sbjct: 236 AFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSL 295
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
+ G Q G G + + V N+ + Y + G E++ RLF EM ++W A++S
Sbjct: 296 DMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMIS 355
Query: 350 GYAKF-----------GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
G+A+ + + + +F ++ +KPD T +LS CS +E+G
Sbjct: 356 GFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQI 415
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+K + + + + ++++ ++ G +E A +MP + W +++S HG
Sbjct: 416 HAQTIKTGFLSDVVVN-SALVNMYNKCGCIEYATKAFVEMP-TRTLVTWTSMISGYSQHG 473
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 122/223 (54%), Gaps = 1/223 (0%)
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M EG ++ + +L C +L K +H +++ ++FV ++LV++Y +C +
Sbjct: 69 MLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGN 128
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A ++F M KNVV+WTA++ GY N A+++F M + G P D+TLG ++S+
Sbjct: 129 SQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSA 188
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
C +++ G Q HG ++ G S ++ N+L Y K GN+E R F + ++ ++W
Sbjct: 189 CVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITW 248
Query: 345 TALVSGYAKFGKANET-IDLFEKMLSHGLKPDEVTLIGVLSAC 386
T ++S A+ E ++LF ML + P+E TL V+S C
Sbjct: 249 TTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLC 291
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 91/174 (52%), Gaps = 2/174 (1%)
Query: 281 VISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD 340
++ C SL HG + TG I I V+ +LV Y +CGN +D+ LF+EM ++
Sbjct: 84 LLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKN 143
Query: 341 EVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
V+WTAL++GY + +++F +ML G P + TL G+LSAC + ++ G+
Sbjct: 144 VVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHG 203
Query: 401 IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
+K YG I + + +++G LE ++P + I W T++S+C
Sbjct: 204 YTIK-YGAASITSIGNSLCRLYTKSGNLESGIRAFKRIP-DKNVITWTTMISAC 255
>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 621
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/543 (42%), Positives = 345/543 (63%), Gaps = 1/543 (0%)
Query: 31 LMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKL 90
+ + D + S T+ST+L + R +D G ++H H GF V + + ++DMY K
Sbjct: 78 IQILDHVDRPSAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKC 137
Query: 91 GLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLM 150
+ +AKR FDE+ E+++ +N MI+G + G ++E+R+LF M ++D+ SWT M +G +
Sbjct: 138 NSLVNAKRLFDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQMTERDNFSWTAMTSGYV 197
Query: 151 QNGLEREAIDLFREM-RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNV 209
++ EA++LFR M R E ++FT S L A + +L GK+IH I+R +
Sbjct: 198 RHDQHEEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHILRIGLDLDG 257
Query: 210 FVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN 269
V SAL DMY KC SI A +F ++VVSWTAM+ Y + G EE +F ++ ++
Sbjct: 258 VVWSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKS 317
Query: 270 GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
GI P++FT V+++CA+ A+ E G Q HG G ++ LV Y KCGNI+++
Sbjct: 318 GIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNA 377
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
R+FN M D VSWT+L+SGYA+ G+ +E + FE +L G +PD +T +GVLSAC+ A
Sbjct: 378 RRVFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVGVLSACTHA 437
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
GLV+KG YF+ + +++G+ DHY C+ID+LSR+GRL+EA+ I+KMP PD WA+
Sbjct: 438 GLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWAS 497
Query: 450 LLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
LL CRIHGN+++ K AAE+L E++P NPA+Y L++IYA+ G W V+++R+ M +GV
Sbjct: 498 LLGGCRIHGNLKLAKRAAEALFEIEPENPATYTTLANIYATAGLWGGVAEVRKVMDARGV 557
Query: 510 RKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVEL 569
K PG SWI+ K VH+F D S S +I+ L KL+++M +EGYVPD + VLHDVE
Sbjct: 558 VKKPGLSWIEIKREVHVFLVGDTSHAKSKEIHEFLGKLSKRMKEEGYVPDTNFVLHDVEE 617
Query: 570 SEK 572
+K
Sbjct: 618 EQK 620
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 170/352 (48%), Gaps = 33/352 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D SW + SG+ H +A++++ M + ++ T S+ L S++ + + L
Sbjct: 181 MTERDNFSWTAMTSGYVRHDQHEEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHL 240
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G++IHGHIL+ G V S L DMY K G I +A+ FD+ ++++V + MI +
Sbjct: 241 GKEIHGHILRIGLDLDGVVWSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFK 300
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G E E LF ++ G+ ++FTF V
Sbjct: 301 EGRRE-------------------------------EGFALFSDLLKSGIWPNEFTFSGV 329
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC A E GKQ+H ++ R + F S LV MY KC +IK A VF M ++
Sbjct: 330 LNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNGMPRPDL 389
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
VSWT+++ GY QNG +EA++ F + ++G +PD T V+S+C + +++G + F
Sbjct: 390 VSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDS 449
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
GL L+ + G ++++ + ++M + D+ W +L+ G
Sbjct: 450 IKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLGG 501
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 96/206 (46%), Gaps = 17/206 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSW LISG+A +G ++A++ + L+LK G ITF +L + VD
Sbjct: 384 MPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGT-QPDHITFVGVLSACTHAGLVDK 442
Query: 61 GRQIHGHIL-KFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITGL 118
G + I K G + L+D+ ++ G + +A+ D++P E + ++ +++ G
Sbjct: 443 GLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLGGC 502
Query: 119 LRRGLVEESRRLFRGM---KDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
G ++ ++R + + ++ ++TT+ GL ++ + M G+
Sbjct: 503 RIHGNLKLAKRAAEALFEIEPENPATYTTLANIYATAGLWGGVAEVRKVMDARGVVKKP- 561
Query: 176 TFGSVLTACGGLLALEEGKQIHAFII 201
GL +E +++H F++
Sbjct: 562 ----------GLSWIEIKREVHVFLV 577
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 225/566 (39%), Positives = 348/566 (61%), Gaps = 33/566 (5%)
Query: 58 VDLGRQIHGHILKFGF-GSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMIT 116
V+ GR +H H++ F +++ + + +V+MYAK G + DA+R FDE+P K++V
Sbjct: 103 VEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMV------- 155
Query: 117 GLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
+WT +I G QN R+A+ LF +M GL + FT
Sbjct: 156 ------------------------TWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFT 191
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
S+L A G L+ G Q+HAF ++ ++ +V+VGSALVDMY +C + A+ F M
Sbjct: 192 LSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMP 251
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
K+ VSW A++ G+ + G E A+ + MQR +P FT SV S+CA++ +LE+G
Sbjct: 252 TKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKW 311
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H + +GL + N L+ Y K G+I+D+ R+F+ + D VSW +++G A+ G
Sbjct: 312 VHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGL 371
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
ET+D FE+ML G++P+E++ + VL+ACS +GL+++G +YFE+M K+Y + P HY
Sbjct: 372 GKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELM-KKYKVEPDVPHYV 430
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY 476
+D+L R G L+ A+ FI +MP P A W LL +CR+H N+E+G +AAE ELDP+
Sbjct: 431 TFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPH 490
Query: 477 NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPY 536
+ +LLS+IYAS G+W V+++R+ M+E GV+K P CSW++ ++ VH+F A+D + P
Sbjct: 491 DSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQ 550
Query: 537 SDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGL 596
+I + E+++ K+ + GYVPD S VL V+ E+ + L +HSEKLA+AF LL P G
Sbjct: 551 IKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGS 610
Query: 597 PIRVVKNLRVCSDCHNATKYISKITQ 622
PIR+ KN+RVC DCH A K++SKI +
Sbjct: 611 PIRIKKNIRVCGDCHAAIKFVSKIYE 636
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 203/414 (49%), Gaps = 43/414 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V+W LI+G + + DA+ ++ ML+ GL + T S++L S S +D
Sbjct: 149 MPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGL-QPNHFTLSSLLKASGSEHGLDP 207
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+H LK+G+ S V+VGS LVDMYA+ G + A+ FD +P K+ V +N +I+G R
Sbjct: 208 GTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHAR 267
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+G E A+ L +M+ + FT+ SV
Sbjct: 268 KGEGE-------------------------------HALHLLWKMQRKNFQPTHFTYSSV 296
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+AC + ALE+GK +HA +I++ K F+G+ L+DMY K SI A+ VF + +V
Sbjct: 297 FSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDV 356
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW ML G Q+G +E + F M R GIEP++ + V+++C++ L+EG +
Sbjct: 357 VSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFEL 416
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKANE 359
+ + V G+ G ++ + R EM + + W AL+ G + K N
Sbjct: 417 MKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALL-GACRMHK-NM 474
Query: 360 TIDLFEKMLSHGLKPDE----VTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
+ ++ + L P + + L + ++ R V K R M+KE G++
Sbjct: 475 ELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRK----MMKESGVK 524
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 166/302 (54%), Gaps = 6/302 (1%)
Query: 158 AIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFV-GSALV 216
A+DL + L D + +L C L +E+G+ +HA ++ + DN V + +V
Sbjct: 74 ALDLIQR---GSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIV 130
Query: 217 DMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDF 276
+MY KC + A +F M K++V+WTA++ G+ QN +A+ +F M R G++P+ F
Sbjct: 131 NMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHF 190
Query: 277 TLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
TL S++ + + L+ GTQ H L G S + V +ALV Y +CG+++ + F+ M
Sbjct: 191 TLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGM 250
Query: 337 NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR 396
+ EVSW AL+SG+A+ G+ + L KM +P T V SAC+ G +E+G+
Sbjct: 251 PTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGK 310
Query: 397 HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRI 456
M+K G++ I ++D+ ++AG +++AK +++ PD + W T+L+ C
Sbjct: 311 WVHAHMIKS-GLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRL-VKPDVVSWNTMLTGCAQ 368
Query: 457 HG 458
HG
Sbjct: 369 HG 370
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 124/250 (49%), Gaps = 15/250 (6%)
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI-SFITVSNALVTFYGKCG 324
+QR + PD ++ C L +E+G H + + + + + + N +V Y KCG
Sbjct: 78 IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 325 NIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
++D+ R+F+EM +D V+WTAL++G+++ + + + LF +ML GL+P+ TL +L
Sbjct: 138 CLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLK 197
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDA 444
A ++ G +K YG + + ++D+ +R G ++ A+ + MP +
Sbjct: 198 ASGSEHGLDPGTQLHAFCLK-YGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSE- 255
Query: 445 IGWATLLSSCRIHGNVEIGKWAAESLLELDPYN-PASYVLLSSIYAS--------KGKWD 495
+ W L+S H G+ A L ++ N ++ SS++++ +GKW
Sbjct: 256 VSWNALISG---HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWV 312
Query: 496 HVSQLRRTMR 505
H ++ ++
Sbjct: 313 HAHMIKSGLK 322
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 245/642 (38%), Positives = 366/642 (57%), Gaps = 32/642 (4%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLM-LKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIH 65
VSWN +I ++ G V + + M +++ L ++ +T +L + R +H
Sbjct: 380 VSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALH 439
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
G+ L+ F + + + YAK G + A+
Sbjct: 440 GYSLRHSFQYKELINNAFIAAYAKCGSLVFAEH--------------------------- 472
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
+F GM K SW +I G QNG +A+D + EM G+ D F+ S+L ACG
Sbjct: 473 ----VFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACG 528
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
L L+ GK+IH F++RN + N FV +L+ +Y C Y + F TM KN V W A
Sbjct: 529 RLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNA 588
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
ML GY QN EA+ +F M +G+EPD+ + S++ +C+ L++L G + H +L
Sbjct: 589 MLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNS 648
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
L+ V+ +L+ Y K G + S R+FN +N ++ SW +++G+ G+ N+ ++LFE
Sbjct: 649 LMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFE 708
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
M +PD T +GVL AC AGLV +G +Y M Y + P +HY C+ID+L RA
Sbjct: 709 DMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRA 768
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
GRL EA +FIN+MP PDA W++LLSS + ++E+G+ AE LL L+ SY+LLS
Sbjct: 769 GRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLS 828
Query: 486 SIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELE 545
++YA+ GKWD V +R+ M++ ++KD GCSWI+ + +V+ F A + S+P SD+I
Sbjct: 829 NLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWN 888
Query: 546 KLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
+L +++++ GY PD S VLH++E EK K+L HSEK+AI FG L G +R+ KNLR
Sbjct: 889 RLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLR 948
Query: 606 VCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+C DCHNA KYISK +REI++RD RFH FK G CSCGD+W
Sbjct: 949 ICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSCGDYW 990
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 134/466 (28%), Positives = 231/466 (49%), Gaps = 44/466 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRI-TFSTMLIMSSSRRCVD 59
MP + +SWN LI G + +G +A + + +L+ G G + + T T+L + S VD
Sbjct: 271 MPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVD 330
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+G IHG +K G + V + L+DMY+K G +
Sbjct: 331 VGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCL-------------------------- 364
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG--LAMDQFTF 177
E+ LFR +++K +SW +MI + G E DL R+M +E + +++ T
Sbjct: 365 -----SEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTI 419
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
++L AC L + +H + +R+ + + +A + Y KC S+ +AE VF M
Sbjct: 420 LNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNT 479
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
K+V SW A++ G+ QNG +A+ + M R GI PDDF++ S++ +C L L+ G +
Sbjct: 480 KSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEI 539
Query: 298 HGRSLVTGL--ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
HG L GL SF+ VS L++ Y C F M ++ V W A++SGY++
Sbjct: 540 HGFVLRNGLEMNSFVAVS--LLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNE 597
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
NE + LF +MLS GL+PDE+ + +L ACS+ + G+ +K + D++
Sbjct: 598 LPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKN---SLMEDNF 654
Query: 416 TC--MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
++D+ +++G L ++ N++ + W +++ +HG
Sbjct: 655 VACSLMDMYAKSGFLGHSQRIFNRLN-GKEVASWNVMITGFGVHGQ 699
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 132/541 (24%), Positives = 239/541 (44%), Gaps = 71/541 (13%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
WN L+SG+ + ++A+ + ++ TF ++ + + + LG+ +HG
Sbjct: 176 QWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGM 235
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
+K G +FVG+ ++ +Y K G + +A FD++PE+N++ +N++I G G E+
Sbjct: 236 AVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEA 295
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
R FR L+++G +GL D T ++L C G
Sbjct: 296 YRAFR---------------SLLESG--------------DGLIPDVATMVTLLPVCSGE 326
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
++ G IH ++ + V +AL+DMY KC + A +FR + K+VVSW +M+
Sbjct: 327 GNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMI 386
Query: 248 VGYGQNGCSEEAVKIFCN--MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
Y + G E + M+ +E ++ T+ +++ +C + L HG SL
Sbjct: 387 GAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHS 446
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
++NA + Y KCG++ + +F MN + SW A++ G+A+ G + +D +
Sbjct: 447 FQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYF 506
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH-----------------------YFEIM 402
+M G+ PD+ +++ +L AC R GL++ G+ YF
Sbjct: 507 EMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCS 566
Query: 403 VKEYG---IRPIHDH----YTCMIDILSRAGRLEEAKSFINKM---PFPPDAIGWATLLS 452
YG + D + M+ S+ EA S +M PD I A++L
Sbjct: 567 KPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILG 626
Query: 453 SCRIHGNVEIGK----WAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
+C + +GK +A ++ L D + S L +YA G H ++ + K
Sbjct: 627 ACSQLSALGLGKEVHCFALKNSLMEDNFVACS---LMDMYAKSGFLGHSQRIFNRLNGKE 683
Query: 509 V 509
V
Sbjct: 684 V 684
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 155/285 (54%), Gaps = 5/285 (1%)
Query: 107 NIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM- 165
+ V+ +IT G ESR +F + +K+ W +++G ++N L EAI F E+
Sbjct: 142 DFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELI 201
Query: 166 RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI 225
+ D FTF ++ AC G + GK +H ++ ++FVG+A++ +Y KC +
Sbjct: 202 SVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFL 261
Query: 226 KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR--NGIEPDDFTLGSVIS 283
A +F M +N++SW +++ G+ +NG EA + F ++ +G+ PD T+ +++
Sbjct: 262 DEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLP 321
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
C+ +++ G HG ++ GL+ + V NAL+ Y KCG + ++ LF ++ + VS
Sbjct: 322 VCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVS 381
Query: 344 WTALVSGYAKFGKANETIDLFEKML--SHGLKPDEVTLIGVLSAC 386
W +++ Y++ G ET DL KM ++ +EVT++ +L AC
Sbjct: 382 WNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPAC 426
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 152/317 (47%), Gaps = 16/317 (5%)
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFV-GSALVDMYCKCKSIKYA 228
LA + G +L CG +E G+++ + + FV + L+ MY C +
Sbjct: 103 LAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLES 162
Query: 229 ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCAN 287
VF + KN+ W A++ GY +N +EA+ F + +PD+FT +I +C
Sbjct: 163 RLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTG 222
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
+ G HG ++ GLI + V NA++ YGKCG ++++ LF++M ++ +SW +L
Sbjct: 223 KCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSL 282
Query: 348 VSGYAKFGKANETIDLFEKMLSH--GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE 405
+ G+++ G E F +L GL PD T++ +L CS G V+ G + VK
Sbjct: 283 IRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVK- 341
Query: 406 YGIRPIHDHYTC--MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG----- 458
+ +H+ C +ID+ S+ G L EA K+ + W +++ + G
Sbjct: 342 --LGLVHELMVCNALIDMYSKCGCLSEAAILFRKIE-NKSVVSWNSMIGAYSREGFVFET 398
Query: 459 -NVEIGKWAAESLLELD 474
++ W E L+E++
Sbjct: 399 FDLLRKMWMEEELMEVN 415
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 5/166 (3%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
+ V WN ++SG++ + N+A+ ++ ML DGL I +++L S + LG+++
Sbjct: 582 NSVCWNAMLSGYSQNELPNEALSLFRQMLSDGL-EPDEIAIASILGACSQLSALGLGKEV 640
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H LK FV L+DMYAK G + ++R F+ L K + +N MITG G
Sbjct: 641 HCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQG 700
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQ----NGLEREAIDLFREMR 166
++ LF MK D G++Q GL E ++ +M+
Sbjct: 701 NKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQ 746
>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/611 (38%), Positives = 351/611 (57%), Gaps = 34/611 (5%)
Query: 40 LSRITFSTMLIMSSSRRCVDLGRQIHGHILK-FGFGSYVFVGSPLVDMYAKLGLIYDAKR 98
LS + ++++ + S +C LGR H I+K F+ + LV+MY+KL A+
Sbjct: 4 LSPNSLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQL 63
Query: 99 GFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREA 158
P +++V +WT +I G +QNG A
Sbjct: 64 LLSLTPNRSVV-------------------------------TWTALIAGSVQNGRFTSA 92
Query: 159 IDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDM 218
+ F MR + + + FTF A G L + GKQ+HA ++ +VFVG + DM
Sbjct: 93 LFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDM 152
Query: 219 YCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
Y K + A +F M +N+ +W A L G ++A+ F ++ GIEP DF +
Sbjct: 153 YSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMV 212
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
SV+S+CA L+ LE G H ++ ++ I V +ALV YGKCG+IED+ R F+EM
Sbjct: 213 SSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPE 272
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKML--SHGLKPDEVTLIGVLSACSRAGLVEKGR 396
R+ V+W A++ GYA G+A+ + LF++M SH + P+ VT + VLSACSRAG V G
Sbjct: 273 RNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGM 332
Query: 397 HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRI 456
FE M YGI P +HY C++D+L RAG +E+A FI KMP P W LL + ++
Sbjct: 333 EIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKM 392
Query: 457 HGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCS 516
G E+GK AA++L ELDP + ++VLLS+++A+ G+W+ + +R+ M++ G++K GCS
Sbjct: 393 FGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCS 452
Query: 517 WIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKML 576
WI + VH+F A D S + +I A L KL +M GY+PD S L D+E EK +
Sbjct: 453 WITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEV 512
Query: 577 NHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLF 636
+HSEK+A+AFGL+ IP G+PIR+ KNLR+C DCH+A K+IS I REI+VRD FH F
Sbjct: 513 WYHSEKIALAFGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRF 572
Query: 637 KNGECSCGDFW 647
++ +CSC D+W
Sbjct: 573 RDNQCSCRDYW 583
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 173/362 (47%), Gaps = 40/362 (11%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P V+W LI+G +G A+ ++ M +D + + TF S S R +G
Sbjct: 69 PNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSI-QPNDFTFPCAFKASGSLRSPLVG 127
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+Q+H +K G S VFVG DMY+K GL +A++ FDE+PE+NI +N +
Sbjct: 128 KQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYL------ 181
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
S + G D +A+ F E R EG+ F SVL
Sbjct: 182 -----SNSVLEGRYD--------------------DALTAFIEARKEGIEPTDFMVSSVL 216
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+AC GL LE GK +H ++ N+FVGSALVDMY KC SI+ AE F M +N+V
Sbjct: 217 SACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLV 276
Query: 242 SWTAMLVGYGQNGCSEEAVKIF----CNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ- 296
+W AM+ GY G ++ AV +F C R + P+ T V+S+C+ S+ G +
Sbjct: 277 TWNAMIGGYAHQGQADMAVTLFDEMTCGSHR--VAPNYVTFVCVLSACSRAGSVNVGMEI 334
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFG 355
F G+ +V G+ G +E +++ +M +R VS W AL+ FG
Sbjct: 335 FESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFG 394
Query: 356 KA 357
K+
Sbjct: 395 KS 396
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 87/172 (50%), Gaps = 7/172 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +WN +S G +DA+ + K+G+ + S++L + +++
Sbjct: 169 MPERNIATWNAYLSNSVLEGRYDDALTAFIEARKEGI-EPTDFMVSSVLSACAGLSVLEV 227
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +H +K +FVGS LVDMY K G I DA+R FDE+PE+N+V +N MI G
Sbjct: 228 GKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAH 287
Query: 121 RGLVEESRRLFRGMK------DKDSISWTTMITGLMQNGLEREAIDLFREMR 166
+G + + LF M + +++ +++ + G +++F MR
Sbjct: 288 QGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMR 339
>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 776
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 249/671 (37%), Positives = 389/671 (57%), Gaps = 61/671 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNL-SRITFSTMLIMSSSRRCVD 59
MP + V+W LI+GH + A++V+ ML+ LG S T ML S+ R +D
Sbjct: 137 MPDKNVVTWTALITGHTLNSEPALALEVFVEMLE--LGRYPSHYTLGGMLSACSAARRID 194
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
LG+Q+HG+ +K+G + +G+ L +Y K +G L
Sbjct: 195 LGQQVHGYSIKYGADTITSMGNSLCRLYCK--------------------------SGDL 228
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQ--NGLEREAIDLFREMRLEGLAMDQFTF 177
GL R F+G DK+ I+WTTMI+ + N L+ + LF +M G+ ++FT
Sbjct: 229 ESGL-----RAFKGTPDKNVITWTTMISSCAEDENYLDL-GLSLFLDMLEGGVMPNEFTL 282
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
SV++ CG L + GKQ+ AF + + N+ V ++ + +Y + A +F M
Sbjct: 283 TSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDS 342
Query: 238 KNVVSWTAMLVGYGQNGCSE-----------EAVKIFCNMQRNGIEPDDFTLGSVISSCA 286
++++W AM+ GY Q S +A+K+F ++ R+ ++PD FT S++S C+
Sbjct: 343 SSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCS 402
Query: 287 NLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTA 346
+ +LE+G Q H ++ TG +S + V++ALV Y KCG+IE + + F EM R V+WT+
Sbjct: 403 AMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTS 462
Query: 347 LVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY 406
++SGY++ G++ + I LFE M+ G +P+E+T + +LSACS AGLVE+ YF++M EY
Sbjct: 463 MISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSACSYAGLVEEAERYFDMMRNEY 522
Query: 407 GIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWA 466
I P+ DHY CM+D+ R GRL++A SFI + F P+ W++L++ CR HGN+E+ +A
Sbjct: 523 HIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYA 582
Query: 467 AESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREK--GVRKDPGCSWIKYKSRV 524
A+ LLEL P +YVLL ++Y S G+W V+++R+ + + GV +D SWI + +V
Sbjct: 583 ADRLLELKPKVIETYVLLLNMYISTGRWRDVARVRKLAKHEDVGVLRDR--SWIAIRDKV 640
Query: 525 HIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVP--DMSSVLHDVELSEKIK-------M 575
+ F ADD + P + ++Y LE L K GY P + +L D + + K +
Sbjct: 641 YFFRADDMTHPQATELYQLLENLLEKAKAVGYEPYQNAPELLFDSKEGDDDKPAAAAGSL 700
Query: 576 LNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHL 635
+ HHSE+LA+A GLL PPG +RV KN+ +C DCH++ KY S + REI+VRD+ R H
Sbjct: 701 IKHHSERLAVALGLLETPPGATVRVTKNITMCRDCHSSIKYFSLLANREIVVRDSKRLHK 760
Query: 636 FKNGECSCGDF 646
FK+G CSCGDF
Sbjct: 761 FKDGRCSCGDF 771
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 207/452 (45%), Gaps = 66/452 (14%)
Query: 32 MLKDGLGNLSRITFSTMLIMSSSRRCVDLG-----RQIHGHILKFGFGSYVFVGSPLVDM 86
ML+DG T + + + RCV+ G R +HGH++K G + +FV + LV++
Sbjct: 67 MLRDGQ------TVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNV 120
Query: 87 YAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMI 146
Y + DA RRLF GM DK+ ++WT +I
Sbjct: 121 YMRCASSRDA-------------------------------RRLFDGMPDKNVVTWTALI 149
Query: 147 TGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHK 206
TG N A+++F EM G +T G +L+AC ++ G+Q+H + I+
Sbjct: 150 TGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQVHGYSIKYGAD 209
Query: 207 DNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEE------AV 260
+G++L +YCK ++ F+ KNV++WT M+ + C+E+ +
Sbjct: 210 TITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMI-----SSCAEDENYLDLGL 264
Query: 261 KIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFY 320
+F +M G+ P++FTL SV+S C + G Q G + + V N+ + Y
Sbjct: 265 SLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMYLY 324
Query: 321 GKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF-----------GKANETIDLFEKMLS 369
+ G +++ RLF EM+ ++W A++SGYA+ + + + LF ++
Sbjct: 325 LRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRDLVR 384
Query: 370 HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLE 429
LKPD T +LS CS +E+G +K + + + + ++++ ++ G +E
Sbjct: 385 SELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVN-SALVNMYNKCGSIE 443
Query: 430 EAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
A +MP + W +++S HG +
Sbjct: 444 CATKAFVEMP-TRTPVTWTSMISGYSQHGRSQ 474
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 121/232 (52%), Gaps = 5/232 (2%)
Query: 156 REAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSAL 215
+EA+ + R+ G + + +L C L + +H +++ ++FV ++L
Sbjct: 62 QEAMGMLRD----GQTVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSL 117
Query: 216 VDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDD 275
V++Y +C S + A +F M KNVV+WTA++ G+ N A+++F M G P
Sbjct: 118 VNVYMRCASSRDARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSH 177
Query: 276 FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNE 335
+TLG ++S+C+ ++ G Q HG S+ G + ++ N+L Y K G++E R F
Sbjct: 178 YTLGGMLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKG 237
Query: 336 MNVRDEVSWTALVSGYAK-FGKANETIDLFEKMLSHGLKPDEVTLIGVLSAC 386
++ ++WT ++S A+ + + LF ML G+ P+E TL V+S C
Sbjct: 238 TPDKNVITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLC 289
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/641 (37%), Positives = 372/641 (58%), Gaps = 33/641 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSWN +I+G +G + ++++ ML G+ + T ++L+ ++ + LGR +
Sbjct: 535 DVVSWNSMINGCVVNGFSGNGLEIFIQMLILGV-EVDLTTLVSVLVAWANIGNLSLGRAL 593
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG +K F V + L+DMY+K G + A
Sbjct: 594 HGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATE-------------------------- 627
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+F M D +SWT+ I ++ GL +AI LF EM+ +G+ D +T S++ AC
Sbjct: 628 -----VFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHAC 682
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+L++G+ +H+++I+N N+ V +AL++MY KC S++ A VF + K++VSW
Sbjct: 683 ACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWN 742
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
M+ GY QN EA+++F +MQ+ +PDD T+ V+ +CA LA+L++G + HG L
Sbjct: 743 TMIGGYSQNSLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAALDKGREIHGHILRR 801
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G S + V+ ALV Y KCG + + LF+ + +D +SWT +++GY G NE I F
Sbjct: 802 GYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTF 861
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+M G++PDE + +L+ACS +GL+ +G +F M E G+ P +HY C++D+L+R
Sbjct: 862 NEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLAR 921
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
G L +A FI MP PD W LLS CRIH +V++ + AE + EL+P N YV+L
Sbjct: 922 MGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVL 981
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
+++YA KW+ V +LR+ M+++G +++PGCSWI+ + +IF A + P + +I L
Sbjct: 982 ANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLL 1041
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
KL +M E Y VL + + EK + HSEK A+AFG+L +PPG +RV KN
Sbjct: 1042 RKLTMQMQNEDYFSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNQ 1101
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGD 645
RVC DCH K++SK T+REI++RD+ RFH FK+G CSC D
Sbjct: 1102 RVCGDCHEMGKFMSKTTKREIVLRDSNRFHHFKDGLCSCRD 1142
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 138/482 (28%), Positives = 248/482 (51%), Gaps = 41/482 (8%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGL-GNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
WNLL+S +A G+ ++V ++ M K G+ GN TF+ +L ++ V +++HG+
Sbjct: 438 WNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNC--YTFTCVLKCFAALGKVKECKRVHGY 495
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
+LK GFGS N + N++I + G VE +
Sbjct: 496 VLKLGFGS-------------------------------NTAVVNSLIAAYFKFGGVESA 524
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
LF + + D +SW +MI G + NG +++F +M + G+ +D T SVL A +
Sbjct: 525 HNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANI 584
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
L G+ +H F ++ + V + L+DMY KC ++ A VF M +VSWT+ +
Sbjct: 585 GNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTI 644
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
Y + G +A+ +F MQ G+ PD +T+ S++ +CA +SL++G H + G+
Sbjct: 645 AAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMG 704
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
S + V+NAL+ Y KCG++E++ +F+++ V+D VSW ++ GY++ NE ++LF M
Sbjct: 705 SNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDM 764
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC-MIDILSRAG 426
KPD++T+ VL AC+ ++KGR +++ + H C ++D+ ++ G
Sbjct: 765 QKQ-FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDL--HVACALVDMYAKCG 821
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIH--GNVEIGKWAAESLLELDPYNPASYVLL 484
L A+ + +P D I W +++ +H GN I + + ++P + V+L
Sbjct: 822 LLVLAQLLFDMIP-KKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVIL 880
Query: 485 SS 486
++
Sbjct: 881 NA 882
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/442 (25%), Positives = 219/442 (49%), Gaps = 36/442 (8%)
Query: 10 NLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHIL 69
N I+ G + +A++ L+ K L ++ ++L + + ++ ++ G+++H I+
Sbjct: 340 NAKINKFCEMGDLRNAIE---LLTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVII 396
Query: 70 KFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRR 129
G +G+ LV MY G + ++ FD++
Sbjct: 397 SNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKI-------------------------- 430
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
M DK + W +++ + G RE++ LF++M+ G+ + +TF VL L
Sbjct: 431 ----MNDKVFL-WNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGK 485
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
++E K++H ++++ N V ++L+ Y K ++ A ++F ++ +VVSW +M+ G
Sbjct: 486 VKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMING 545
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
NG S ++IF M G+E D TL SV+ + AN+ +L G HG +
Sbjct: 546 CVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEE 605
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
+ SN L+ Y KCGN+ + +F +M VSWT+ ++ Y + G ++ I LF++M S
Sbjct: 606 VVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQS 665
Query: 370 HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLE 429
G++PD T+ ++ AC+ + ++KGR ++K G+ +I++ ++ G +E
Sbjct: 666 KGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKN-GMGSNLPVTNALINMYAKCGSVE 724
Query: 430 EAKSFINKMPFPPDAIGWATLL 451
EA+ +K+P D + W T++
Sbjct: 725 EARLVFSKIPV-KDIVSWNTMI 745
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 96/193 (49%), Gaps = 33/193 (17%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VSWN +I G++ + N+A++++ M K + IT + +L + +D
Sbjct: 733 IPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQFKPD--DITMACVLPACAGLAALDK 790
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR+IHGHIL+ G+ S + V LVDMYAK GL+ A+ FD +P+K+++ + MI G
Sbjct: 791 GREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGY-- 848
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GM +G EAI F EMR+ G+ D+ +F +
Sbjct: 849 ------------GM-----------------HGFGNEAISTFNEMRIAGIEPDESSFSVI 879
Query: 181 LTACGGLLALEEG 193
L AC L EG
Sbjct: 880 LNACSHSGLLNEG 892
>gi|357509743|ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360204|gb|ABN08217.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355500175|gb|AES81378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/613 (38%), Positives = 367/613 (59%), Gaps = 40/613 (6%)
Query: 40 LSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRG 99
L R +T+L ++ SR + G Q+H HI+K G + + L++ Y+K L Y + +
Sbjct: 19 LYRNLCNTLLSLTFSRS-LPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQI 77
Query: 100 FDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAI 159
F + P K+ + +W+++I+ QN L ++
Sbjct: 78 FHDSPHKS-------------------------------ATTWSSVISSFAQNDLPLLSL 106
Query: 160 DLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMY 219
+ FR M +G+ D F S +CG L +L K +H F ++ + ++FVGS+++DMY
Sbjct: 107 NYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMY 166
Query: 220 CKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIF----CNMQRNGIEPDD 275
KC I YA +VF M ++NVVSW+ ++ GY Q G +E++++F + G+ +D
Sbjct: 167 AKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGV--ND 224
Query: 276 FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNE 335
FTL SV+ C L+ G HG S T S V+++L++ Y KCG +E+++ +F E
Sbjct: 225 FTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEE 284
Query: 336 MNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS-HGLKPDEVTLIGVLSACSRAGLVEK 394
+ VR+ W A++ A+ ++T +LF+KM S G+K + +T + VL ACS AGLVEK
Sbjct: 285 VTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEK 344
Query: 395 GRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
G++YFE+M K+YGI P HY+ M+D+L RAG+L +A I +MP P W LL+ C
Sbjct: 345 GKYYFELM-KDYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESVWGALLTGC 403
Query: 455 RIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPG 514
R+HGN ++ + A+ + EL + +V+LS+ YA+ G+W+ ++ R+ MR++G++K+ G
Sbjct: 404 RLHGNTKLASYVADRVSELGSVSSGLHVMLSNAYAAAGRWEEAAKARKMMRDRGIKKETG 463
Query: 515 CSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIK 574
SW++ +R+H F+A D S S +IY +L++L +M K GYV D S VL +V+ EK +
Sbjct: 464 LSWVEEGNRIHTFAAGDRSHAKSVEIYDKLDELGEEMDKAGYVADTSFVLKEVDGEEKSR 523
Query: 575 MLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFH 634
+ +HSE+LAIAFG + P G PIRV+KNLRVC DCH A K+ISK T R I+VRD RFH
Sbjct: 524 SIRYHSERLAIAFGFITFPHGQPIRVMKNLRVCGDCHTAIKFISKCTGRVIIVRDNNRFH 583
Query: 635 LFKNGECSCGDFW 647
F++G+C+CGD+W
Sbjct: 584 RFEDGKCTCGDYW 596
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 165/356 (46%), Gaps = 42/356 (11%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRC---- 57
P +W+ +IS A + ++ + LML+ G+ I S+++ C
Sbjct: 82 PHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHI------FPSATKSCGILS 135
Query: 58 -VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMIT 116
+ + + +H LK + +FVGS ++DMYAK G I A FDE+P +N+V ++ +I
Sbjct: 136 SLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIY 195
Query: 117 GLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
G ++ G +ES RLF+ L E E ++ FT
Sbjct: 196 GYVQLGEDDESLRLFKRF--------------------------LVEE---ENEGVNDFT 226
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
SVL CGG L+ G+ IH + + FV S+L+ +Y KC ++ A VF +
Sbjct: 227 LSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVT 286
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR-NGIEPDDFTLGSVISSCANLASLEEGT 295
+N+ W AML+ Q+ +++ ++F M+ G++ + T V+ +C++ +E+G
Sbjct: 287 VRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGK 346
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
+ G+ + +V G+ G + D+ +L EM + E W AL++G
Sbjct: 347 YYFELMKDYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESVWGALLTG 402
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 104/225 (46%), Gaps = 44/225 (19%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYN-LMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
MP+ + VSW+ LI G+ G +++++++ ++++ ++ T S++L + +
Sbjct: 182 MPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQ 241
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+GR IHG K F S FV S L+ +Y+K G++ +A F+E+ +N+ M+N M+
Sbjct: 242 MGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACA 301
Query: 120 RR------------------------------------GLVEESRRLFRGMKD----KDS 139
+ GLVE+ + F MKD +
Sbjct: 302 QHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGIEPGT 361
Query: 140 ISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
++TM+ L + G +A+ L EM +E + +G++LT C
Sbjct: 362 QHYSTMVDLLGRAGKLNDAVKLIEEMPMEP---TESVWGALLTGC 403
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 242/615 (39%), Positives = 357/615 (58%), Gaps = 37/615 (6%)
Query: 39 NLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKR 98
N ++ TF ++ + + + G +H ++ GF F+ + L++MY +LG I A +
Sbjct: 75 NPTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALK 134
Query: 99 GFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREA 158
FDE E+ I ++N LFR + M+ G +E
Sbjct: 135 VFDETRERTIYVWNA----------------LFRAL---------AMV------GHGKEL 163
Query: 159 IDLFREMRLEGLAMDQFTFGSVLTACG----GLLALEEGKQIHAFIIRNDHKDNVFVGSA 214
+DL+ +M G D+FT+ VL AC + L +GK+IHA I+R+ ++ N+ V +
Sbjct: 164 LDLYIQMNWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEANIHVMTT 223
Query: 215 LVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE-- 272
L+D+Y K S+ YA SVF M KN VSW+AM+ + +N +A+++F M
Sbjct: 224 LLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSV 283
Query: 273 PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRL 332
P+ T+ +++ +CA LA+LE+G HG L L S + V NAL+T YG+CG + R+
Sbjct: 284 PNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRV 343
Query: 333 FNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLV 392
F+ M RD VSW +L+S Y G + I +FE M+ G+ P ++ I VL ACS AGLV
Sbjct: 344 FDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLV 403
Query: 393 EKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
E+G+ FE M+ +Y I P +HY CM+D+L RA RL EA I M F P W +LL
Sbjct: 404 EEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLIEDMHFEPGPTVWGSLLG 463
Query: 453 SCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKD 512
SCRIH NVE+ + A+ L EL+P N +YVLL+ IYA W + + + +G++K
Sbjct: 464 SCRIHCNVELAERASTVLFELEPRNAGNYVLLADIYAEAKLWSEAKSVMKLLEARGLQKL 523
Query: 513 PGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEK 572
PGCSWI+ K +V+ F + D +P ++I+A L KL+ +M +GYVP + VL+D++ EK
Sbjct: 524 PGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEEK 583
Query: 573 IKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVR 632
+++ HSEKLA+AFGL+ G IR+ KNLR+C DCH TK+ISK REILVRD R
Sbjct: 584 ERIVLGHSEKLAVAFGLINTAKGETIRIRKNLRLCEDCHAVTKFISKFANREILVRDVNR 643
Query: 633 FHLFKNGECSCGDFW 647
FH F++G CSCGD+W
Sbjct: 644 FHHFRDGVCSCGDYW 658
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 146/293 (49%), Gaps = 40/293 (13%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLS-RITFSTML---IMSSSRRC-VDLGRQ 63
WN L A G + + +Y M + +G S R T++ +L ++S C + G++
Sbjct: 147 WNALFRALAMVGHGKELLDLYIQM--NWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKE 204
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
IH HIL+ G+ + + V + L+D+YAK G + A F +P KN V
Sbjct: 205 IHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFV-------------- 250
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL--AMDQFTFGSVL 181
SW+ MI +N + +A++LF+ M E + T ++L
Sbjct: 251 -----------------SWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNML 293
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
AC GL ALE+GK IH +I+R + V +AL+ MY +C + + VF M ++VV
Sbjct: 294 QACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVV 353
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
SW +++ YG +G ++A++IF NM G+ P + +V+ +C++ +EEG
Sbjct: 354 SWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEG 406
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 92/195 (47%), Gaps = 32/195 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNL-SRITFSTMLIMSSSRRCVD 59
MP + VSW+ +I+ A + A++++ LM+ + ++ + +T ML + ++
Sbjct: 244 MPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALE 303
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G+ IHG+IL+ S + V + L+ MY + G + +R FD + ++++V
Sbjct: 304 QGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVV---------- 353
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
SW ++I+ +G ++AI +F M +G++ +F +
Sbjct: 354 ---------------------SWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFIT 392
Query: 180 VLTACGGLLALEEGK 194
VL AC +EEGK
Sbjct: 393 VLGACSHAGLVEEGK 407
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/657 (36%), Positives = 374/657 (56%), Gaps = 48/657 (7%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
+N+ I G++ A+++ N K +L T+ ++L + + + + GR+IH I
Sbjct: 71 YNIEICRFCELGNLRRAMELINQSPKP---DLELRTYCSVLQLCADLKSIQDGRRIHSII 127
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG------ 122
+GS LV MY G + + +R FD++ + + ++N ++ G + G
Sbjct: 128 QSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESL 187
Query: 123 ------------LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL 170
VE +R+LF + D+D ISW +MI+G + NGL + +DLF +M L G+
Sbjct: 188 SLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGI 247
Query: 171 AMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAES 230
D T SV + + + L+DMY K ++ A
Sbjct: 248 NTDLATMVSV---------------------------ELTLNNCLLDMYSKSGNLNSAIQ 280
Query: 231 VFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS 290
VF TM ++VVSWT+M+ GY + G S+ +V++F M++ + P+ T+ ++ +CA+LA+
Sbjct: 281 VFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAA 340
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
LE G + HG L G V+NALV Y KCG + + LF+ + +D VSWT +++G
Sbjct: 341 LERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAG 400
Query: 351 YAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP 410
Y G +E I F +M + G++PDEV+ I +L ACS +GL+++G +F +M I P
Sbjct: 401 YGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEP 460
Query: 411 IHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL 470
+HY C++D+L+RAG L +A FI MP PDA W LL CRI+ +V++ + AE +
Sbjct: 461 KSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHV 520
Query: 471 LELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSAD 530
EL+P N YVLL++IYA KW+ V +LR + +G+RK+PGCSWI+ K +VHIF
Sbjct: 521 FELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTG 580
Query: 531 DWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLL 590
D S P +++I L+K +M +EG+ P M L + +EK L HSEK+A+AFG+L
Sbjct: 581 DSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGIL 640
Query: 591 FIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+PPG +RV KNLRVC DCH K++SK+ +R+I++RD+ RFH FK+G CSC W
Sbjct: 641 SLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 697
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 117/247 (47%), Gaps = 38/247 (15%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW +I+G+A G + +V++++ M K+ L S IT + +L +S ++ G++IHG
Sbjct: 291 VSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNS-ITMACILPACASLAALERGQEIHG 349
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
HIL+ GF V + LVDMY K G + A+ FD +PEK++V
Sbjct: 350 HILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLV----------------- 392
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
SWT MI G +G EAI F EMR G+ D+ +F S+L AC
Sbjct: 393 --------------SWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSH 438
Query: 187 LLALEEGKQIHAFIIRN---DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK-NVVS 242
L+EG + N + K + + +VD+ + ++ A + M + +
Sbjct: 439 SGLLDEGWGFFNMMRNNCCIEPKSEHY--ACIVDLLARAGNLSKAYKFIKMMPIEPDATI 496
Query: 243 WTAMLVG 249
W A+L G
Sbjct: 497 WGALLCG 503
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 242/645 (37%), Positives = 373/645 (57%), Gaps = 34/645 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW+ +I + + + A+++ M + S + +M+ + + + +G+ +
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQV-RPSEVAMVSMVNLFADTANMRMGKAM 217
Query: 65 HGHILKFGFGSYVFV--GSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
H ++++ ++ V + L+DMYAK G + G
Sbjct: 218 HAYVIRNSNNEHMGVPTTTALLDMYAKCGHL----------------------------G 249
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
L +R+LF G+ K +SWT MI G +++ E LF M+ E + ++ T S++
Sbjct: 250 L---ARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIV 306
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
CG AL+ GKQ+HA+I+RN ++ + +ALVDMY KC I+ A ++F + ++V+
Sbjct: 307 ECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMI 366
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL 302
WTAML Y Q C ++A +F M+ +G+ P T+ S++S CA +L+ G H
Sbjct: 367 WTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYID 426
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
+ ++ ALV Y KCG+I + RLF E RD W A+++G+A G E +D
Sbjct: 427 KERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALD 486
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL 422
+F +M G+KP+++T IG+L ACS AGLV +G+ FE MV +G+ P +HY CM+D+L
Sbjct: 487 IFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLL 546
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYV 482
RAG L+EA I MP P+ I W L+++CR+H N ++G+ AA LLE++P N V
Sbjct: 547 GRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNV 606
Query: 483 LLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYA 542
L+S+IYA+ +W + +R+TM+ G++K+PG S I+ VH F D S P +I
Sbjct: 607 LMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINE 666
Query: 543 ELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVK 602
L ++ RK+ + GYVPD S+VL +++ EK L +HSEKLA+AFGL+ P PIR+VK
Sbjct: 667 MLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVK 726
Query: 603 NLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
NLRVC+DCH ATK +SKI R I+VRD RFH F+ G CSCGD+W
Sbjct: 727 NLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 771
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 122/405 (30%), Positives = 206/405 (50%), Gaps = 39/405 (9%)
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
LG++IHG +LK G VFVG+ L+ MY +
Sbjct: 110 TQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECAC------------------------- 144
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
VE +R +F M ++D +SW+TMI L +N A++L REM + +
Sbjct: 145 ------VEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAM 198
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFV--GSALVDMYCKCKSIKYAESVFRTM 235
S++ + GK +HA++IRN + +++ V +AL+DMY KC + A +F +
Sbjct: 199 VSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGL 258
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
K VVSWTAM+ G ++ EE K+F MQ I P++ T+ S+I C +L+ G
Sbjct: 259 TQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGK 318
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
Q H L G + ++ ALV YGKC +I ++ LF+ RD + WTA++S YA+
Sbjct: 319 QLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQAN 378
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE-YGIRPIHDH 414
++ +LF++M + G++P +VT++ +LS C+ AG ++ G+ + KE + I +
Sbjct: 379 CIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILN- 437
Query: 415 YTCMIDILSRAGRLEEA-KSFINKMPFPPDAIGWATLLSSCRIHG 458
T ++D+ ++ G + A + FI + D W +++ +HG
Sbjct: 438 -TALVDMYAKCGDINAAGRLFIEAI--SRDICMWNAIITGFAMHG 479
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 162/327 (49%), Gaps = 35/327 (10%)
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
F SVL ACG + + GK+IH F+++ +VFVG+AL+ MY +C ++YA VF
Sbjct: 94 NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE 293
M ++VVSW+ M+ +N + A+++ M + P + + S+++ A+ A++
Sbjct: 154 KMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRM 213
Query: 294 GTQFHGRSLVTGLISFITV--SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
G H + + V + AL+ Y KCG++ + +LFN + + VSWTA+++G
Sbjct: 214 GKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGC 273
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG--------RHYFEI-- 401
+ + E LF +M + P+E+T++ ++ C G ++ G R+ F +
Sbjct: 274 IRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSL 333
Query: 402 -----MVKEYG-------IRPIHDH--------YTCMIDILSRAGRLEEAKSFINKMP-- 439
+V YG R + D +T M+ ++A +++A + ++M
Sbjct: 334 ALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTS 393
Query: 440 -FPPDAIGWATLLSSCRIHGNVEIGKW 465
P + +LLS C + G +++GKW
Sbjct: 394 GVRPTKVTIVSLLSLCAVAGALDLGKW 420
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 237/641 (36%), Positives = 372/641 (58%), Gaps = 33/641 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSWN +I+G +G + ++++ ML G+ + T ++L+ ++ + LGR +
Sbjct: 260 DVVSWNSMINGCVVNGFSGNGLEIFIQMLILGV-EVDLTTLVSVLVACANIGNLSLGRAL 318
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG +K F V + L+DMY+K G + A
Sbjct: 319 HGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATE-------------------------- 352
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+F M D +SWT++I ++ GL +AI LF EM+ +G+ D +T S++ AC
Sbjct: 353 -----VFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHAC 407
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+L++G+ +H+++I+N N+ V +AL++MY KC S++ A VF + K++VSW
Sbjct: 408 ACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWN 467
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
M+ GY QN EA+++F +MQ+ +PDD T+ V+ +CA LA+L++G + HG L
Sbjct: 468 TMIGGYSQNLLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAALDKGREIHGHILRR 526
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G S + V+ ALV Y KCG + + LF+ + +D +SWT +++GY G NE I F
Sbjct: 527 GYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTF 586
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+M G++PDE + +L+ACS +GL+ +G +F M E G+ P +HY C++D+L+R
Sbjct: 587 NEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLAR 646
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
G L +A FI MP PD W LLS CRIH +V++ + AE + EL+P N YV+L
Sbjct: 647 MGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVL 706
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
+++YA KW+ V +LR+ M+++G +++PGCSWI+ + +IF A + P + +I L
Sbjct: 707 ANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLL 766
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
KL +M E Y VL + + EK + HSEK A+AFG+L +PPG +RV KN
Sbjct: 767 SKLTMQMQNEDYSSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNR 826
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGD 645
RVC DCH K++SK T+ EI++RD+ RFH FK+G CSC D
Sbjct: 827 RVCGDCHEMGKFMSKTTKMEIVLRDSNRFHHFKDGLCSCRD 867
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 237/452 (52%), Gaps = 39/452 (8%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGL-GNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
WNLL+S +A G+ ++V ++ M K G+ GN TF+ +L ++ V +++HG+
Sbjct: 163 WNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNC--YTFTCVLKCFAALGKVKECKRVHGY 220
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
+LK GFGS N + N++I + G VE +
Sbjct: 221 VLKLGFGS-------------------------------NTAVVNSLIAAYFKFGGVESA 249
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
LF + + D +SW +MI G + NG +++F +M + G+ +D T SVL AC +
Sbjct: 250 HNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANI 309
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
L G+ +H F ++ + V + L+DMY KC ++ A VF M +VSWT+++
Sbjct: 310 GNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSII 369
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
Y + G +A+ +F MQ G+ PD +T+ S++ +CA +SL++G H + G+
Sbjct: 370 AAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMG 429
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
S + V+NAL+ Y KCG++E++ +F+++ V+D VSW ++ GY++ NE ++LF M
Sbjct: 430 SNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDM 489
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC-MIDILSRAG 426
KPD++T+ VL AC+ ++KGR +++ + H C ++D+ ++ G
Sbjct: 490 QKQ-FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDL--HVACALVDMYAKCG 546
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
L A+ + +P D I W +++ +HG
Sbjct: 547 LLVLAQLLFDMIP-KKDLISWTVMIAGYGMHG 577
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 221/442 (50%), Gaps = 36/442 (8%)
Query: 10 NLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHIL 69
N I+ G + +A++ L+ K L ++ ++L + + ++ ++ G+++H I+
Sbjct: 65 NAKINKFCEMGDLRNAIE---LLTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVII 121
Query: 70 KFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRR 129
G +G+ LV MY G + ++ FD++
Sbjct: 122 SNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKI-------------------------- 155
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
M DK + W +++ + G RE++ LF++M+ G+ + +TF VL L
Sbjct: 156 ----MNDKVFL-WNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGK 210
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
++E K++H ++++ N V ++L+ Y K ++ A ++F ++ +VVSW +M+ G
Sbjct: 211 VKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMING 270
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
NG S ++IF M G+E D TL SV+ +CAN+ +L G HG +
Sbjct: 271 CVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEE 330
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
+ SN L+ Y KCGN+ + +F +M VSWT++++ Y + G ++ I LF++M S
Sbjct: 331 VVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQS 390
Query: 370 HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLE 429
G++PD T+ ++ AC+ + ++KGR ++K G+ +I++ ++ G +E
Sbjct: 391 KGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKN-GMGSNLPVTNALINMYAKCGSVE 449
Query: 430 EAKSFINKMPFPPDAIGWATLL 451
EA+ +K+P D + W T++
Sbjct: 450 EARLVFSKIPV-KDIVSWNTMI 470
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 97/193 (50%), Gaps = 33/193 (17%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VSWN +I G++ + N+A++++ M K + IT + +L + +D
Sbjct: 458 IPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQFKPD--DITMACVLPACAGLAALDK 515
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR+IHGHIL+ G+ S + V LVDMYAK GL+ A+ FD +P+K+++ + MI G
Sbjct: 516 GREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGY-- 573
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GM +G EAI F EMR+ G+ D+ +F ++
Sbjct: 574 ------------GM-----------------HGFGNEAISTFNEMRIAGIEPDESSFSAI 604
Query: 181 LTACGGLLALEEG 193
L AC L EG
Sbjct: 605 LNACSHSGLLNEG 617
>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Glycine max]
Length = 586
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/614 (39%), Positives = 362/614 (58%), Gaps = 45/614 (7%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
+ +L S RR +D G+Q+HG + K GF VG+ ++DMY+K G+
Sbjct: 7 LNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGM------------ 54
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
V E+ R+F + ++ ISW MI G EA++LFRE
Sbjct: 55 -------------------VGEAARVFNTLPVRNVISWNAMIAGYTNERNGEEALNLFRE 95
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRN--DHKDNVFVGSALVDMYCKC 222
MR +G D +T+ S L AC A EG QIHA +IR+ + V ALVD+Y KC
Sbjct: 96 MREKGEVPDGYTYSSSLKACSCADAAGEGMQIHAALIRHGFPYLAQSAVAGALVDLYVKC 155
Query: 223 KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
+ + A VF + K+V+SW+ +++GY Q +EA+ +F ++ + D F L S+I
Sbjct: 156 RRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNLKEAMDLFRELRESRHRMDGFVLSSII 215
Query: 283 SSCANLASLEEGTQFHGRSLVT--GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD 340
A+ A LE+G Q H ++ GL+ ++V+N+++ Y KCG ++ LF EM R+
Sbjct: 216 GVFADFALLEQGKQMHAYTIKVPYGLLE-MSVANSVLDMYMKCGLTVEADALFREMLERN 274
Query: 341 EVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
VSWT +++GY K G N+ ++LF +M +G++PD VT + VLSACS +GL+++G+ YF
Sbjct: 275 VVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPDSVTYLAVLSACSHSGLIKEGKKYFS 334
Query: 401 IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
I+ I+P +HY CM+D+L R GRL+EAK+ I KMP P+ W TLLS CR+HG+V
Sbjct: 335 ILCSNQKIKPKVEHYACMVDLLGRGGRLKEAKNLIEKMPLKPNVGIWQTLLSVCRMHGDV 394
Query: 461 EIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKY 520
E+GK E LL + NPA+YV++S++YA G W ++R T++ KG++K+ G SW++
Sbjct: 395 EMGKQVGEILLRREGNNPANYVMVSNMYAHAGYWKESEKIRETLKRKGLKKEAGRSWVEM 454
Query: 521 KSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKE-GYVPDMSSVLHDVELSEKIKMLNHH 579
+HIF D P ++I+ L+++ +++ +E GYV ++ LHDVE K++ L H
Sbjct: 455 DKEIHIFYNGDGMHPLIEEIHEVLKEMEKRVKEEMGYVHSINFSLHDVEEESKMESLRVH 514
Query: 580 SEKLAIAFGLLFIPPGLP------IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRF 633
SEKLAI GL+ + GL IR+ KNLRVC DCH K +SK+ + +VRDA RF
Sbjct: 515 SEKLAI--GLVLVRRGLKLKGERVIRIFKNLRVCGDCHAFIKGLSKVLKIAFVVRDANRF 572
Query: 634 HLFKNGECSCGDFW 647
H F+NG CSCGD+W
Sbjct: 573 HRFENGLCSCGDYW 586
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 212/438 (48%), Gaps = 72/438 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + +SWN +I+G+ + + +A+ ++ M + G T+S+ L S
Sbjct: 65 LPVRNVISWNAMIAGYTNERNGEEALNLFREMREKG-EVPDGYTYSSSLKACSCADAAGE 123
Query: 61 GRQIHGHILKFGFG--SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G QIH +++ GF + V LVD+Y K + +A++ FD + EK+++ ++T+I G
Sbjct: 124 GMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGY 183
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+ +D++ +EA+DLFRE+R MD F
Sbjct: 184 AQ----------------EDNL---------------KEAMDLFRELRESRHRMDGFVLS 212
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHK-DNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
S++ LE+GKQ+HA+ I+ + + V ++++DMY KC A+++FR M
Sbjct: 213 SIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVANSVLDMYMKCGLTVEADALFREMLE 272
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
+NVVSWT M+ GYG++G +AV++F MQ NGIEPD T +V+S+C++ ++EG ++
Sbjct: 273 RNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPDSVTYLAVLSACSHSGLIKEGKKY 332
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGK 356
F C N ++ +V + +V + G+
Sbjct: 333 ---------------------FSILCSN----------QKIKPKVEHYACMVDLLGRGGR 361
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
E +L EKM LKP+ +LS C G VE G+ EI+++ G P +Y
Sbjct: 362 LKEAKNLIEKM---PLKPNVGIWQTLLSVCRMHGDVEMGKQVGEILLRREGNNPA--NYV 416
Query: 417 CMIDILSRAGRLEEAKSF 434
+ ++ + AG +E++
Sbjct: 417 MVSNMYAHAGYWKESEKI 434
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 155/344 (45%), Gaps = 44/344 (12%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
+SW+ LI G+A ++ +A+ ++ L++ + S+++ + + ++ G+Q+H
Sbjct: 174 MSWSTLILGYAQEDNLKEAMDLFR-ELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHA 232
Query: 67 HILKFGFGSY-VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
+ +K +G + V + ++DMY K GL +A F E+ E+N+V + MITG + G+
Sbjct: 233 YTIKVPYGLLEMSVANSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGN 292
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
++ LF M+ +NG+E D T+ +VL+AC
Sbjct: 293 KAVELFNEMQ---------------ENGIEP----------------DSVTYLAVLSACS 321
Query: 186 GLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK-NVVSW 243
++EGK+ + + N K V + +VD+ + +K A+++ M K NV W
Sbjct: 322 HSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLKEAKNLIEKMPLKPNVGIW 381
Query: 244 TAMLVGYGQNGCSEEAVKI-FCNMQRNGIEPDDFTLGSVISSCANL----ASLEEGTQFH 298
+L +G E ++ ++R G P ++ + S + + A + E +
Sbjct: 382 QTLLSVCRMHGDVEMGKQVGEILLRREGNNPANYVMVSNMYAHAGYWKESEKIRETLKRK 441
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGN---IEDSHRLFNEMNVR 339
G G S++ + + FY G IE+ H + EM R
Sbjct: 442 GLKKEAGR-SWVEMDKEIHIFYNGDGMHPLIEEIHEVLKEMEKR 484
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 246/649 (37%), Positives = 372/649 (57%), Gaps = 37/649 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D +SWN +ISG+ + + ++++ M+++ + +T ++++ + L
Sbjct: 256 MPRRDRISWNAMISGYFENDVCLEGLRLF-FMMREFFVDPDLMTMTSVISACEALGDERL 314
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR++HG+++K GF + V V + L+ M++ +G
Sbjct: 315 GREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCW--------------------------- 347
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+E+ +F M+ KD +SWT MI+G +NGL +A++ + M EG+ D+ T SV
Sbjct: 348 ----DEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASV 403
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+AC GL L++G +H F R V V ++L+DMY KC+ I A VF + KNV
Sbjct: 404 LSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNV 463
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SWT++++G N S EA+ F M + ++P+ TL SV+S+CA + +L G + H
Sbjct: 464 ISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEIHAH 522
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+L TGL + NAL+ Y +CG +E + FN +D SW L++GYA+ GK
Sbjct: 523 ALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE-KDVASWNILLTGYAQQGKGGLA 581
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++LF KM+ + PDE+T +L ACSR+G+V G YFE M ++ I P HY ++D
Sbjct: 582 VELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVD 641
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAGRLE+A FI KMP PD W LL++CRI+ NVE+G+ AA+ + E+D +
Sbjct: 642 LLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGY 701
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
Y+LL ++YA GKWD V+++R+ MRE + DPGCSW++ +VH F D P +I
Sbjct: 702 YILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEI 761
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
A LE KM G S D++ S K ++ HSE+LAIAFGL+ PG PI V
Sbjct: 762 NAVLEGFYEKMEATGLSMSKDSRRDDIDAS-KAEIFCGHSERLAIAFGLINTVPGTPIWV 820
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGD--FW 647
KNL +C +CHN K+ISK+ +R I VRD +FH FK+G CSCGD +W
Sbjct: 821 TKNLYMCENCHNTVKFISKVVRRGISVRDTEQFHHFKDGVCSCGDEGYW 869
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 150/493 (30%), Positives = 244/493 (49%), Gaps = 45/493 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D SWN+L+ G+A G ++A+ +Y+ ML G+ TF +L +
Sbjct: 155 MAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGI-RPDVYTFPCVLRTCGGLPDLAR 213
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR++H H++++GF S V V + L+ MY K G I+ A
Sbjct: 214 GREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSA------------------------ 249
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
R +F M +D ISW MI+G +N + E + LF MR + D T SV
Sbjct: 250 -------RLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSV 302
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
++AC L G+++H ++I+ V V ++L+ M+ AE VF M +K++
Sbjct: 303 ISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDL 362
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWTAM+ GY +NG E+AV+ + M+ G+ PD+ T+ SV+S+CA L L++G H
Sbjct: 363 VSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEF 422
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ TGL S++ V+N+L+ Y KC I+ + +F+ + ++ +SWT+++ G ++ E
Sbjct: 423 ADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEA 482
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR----HYFEIMVKEYGIRPIHDHYT 416
+ F++M+ LKP+ VTL+ VLSAC+R G + G+ H + G P
Sbjct: 483 LFFFQQMIL-SLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLP-----N 536
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY 476
++D+ R GR+E A + N D W LL+ G + ++E D
Sbjct: 537 ALLDMYVRCGRMEPAWNQFNSC--EKDVASWNILLTGYAQQGKGGLAVELFHKMIESD-V 593
Query: 477 NPASYVLLSSIYA 489
NP S + A
Sbjct: 594 NPDEITFTSLLCA 606
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 216/400 (54%), Gaps = 17/400 (4%)
Query: 112 NTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLA 171
N +++ +R G + E+ +F M ++D SW ++ G + G EA++L+ M G+
Sbjct: 133 NALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIR 192
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
D +TF VL CGGL L G+++H +IR + +V V +AL+ MY KC I A V
Sbjct: 193 PDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLV 252
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASL 291
F M ++ +SW AM+ GY +N E +++F M+ ++PD T+ SVIS+C L
Sbjct: 253 FDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDE 312
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
G + HG + TG ++ ++V+N+L+ + G +++ +F++M +D VSWTA++SGY
Sbjct: 313 RLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGY 372
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
K G + ++ + M G+ PDE+T+ VLSAC+ GL++KG IM+ E+ R
Sbjct: 373 EKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKG-----IMLHEFADRTG 427
Query: 412 HDHYT----CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRI-HGNVEIGKWA 466
Y +ID+ S+ +++A +++P + I W +++ R+ + + E +
Sbjct: 428 LTSYVIVANSLIDMYSKCRCIDKALEVFHRIP-NKNVISWTSIILGLRLNYRSFEALFFF 486
Query: 467 AESLLELDPYNPASYVLLSSIYA-----SKGKWDHVSQLR 501
+ +L L P N + V + S A S GK H LR
Sbjct: 487 QQMILSLKP-NSVTLVSVLSACARIGALSCGKEIHAHALR 525
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 160/309 (51%), Gaps = 3/309 (0%)
Query: 150 MQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNV 209
++ LE+ I L L+ +++++ T+ ++L C A EG ++H+++ + + V
Sbjct: 71 LKGDLEKALIHLDSMQELQ-VSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGV 129
Query: 210 FVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN 269
+G+AL+ M+ + + A VF MA +++ SW ++ GY + G +EA+ ++ M
Sbjct: 130 RLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWV 189
Query: 270 GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
GI PD +T V+ +C L L G + H + G S + V NAL+T Y KCG+I +
Sbjct: 190 GIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSA 249
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
+F+ M RD +SW A++SGY + E + LF M + PD +T+ V+SAC
Sbjct: 250 RLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEAL 309
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
G GR ++K + + + + +I + S G +EA+ +KM F D + W
Sbjct: 310 GDERLGREVHGYVIKTGFVAEVSVNNS-LIQMHSSVGCWDEAEMVFSKMEF-KDLVSWTA 367
Query: 450 LLSSCRIHG 458
++S +G
Sbjct: 368 MISGYEKNG 376
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 245/645 (37%), Positives = 370/645 (57%), Gaps = 35/645 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D +SWN +ISG+ + + ++++ M+++ + +T ++++ + L
Sbjct: 256 MPRRDRISWNAMISGYFENDVCLEGLRLF-FMMREFFVDPDLMTMTSVISACEALGDERL 314
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR++HG+++K GF + V V + L+ M++ +G
Sbjct: 315 GREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCW--------------------------- 347
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+E+ +F M+ KD +SWT MI+G +NGL +A++ + M EG+ D+ T SV
Sbjct: 348 ----DEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASV 403
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+AC GL L++G +H F R V V ++L+DMY KC+ I A VF + KNV
Sbjct: 404 LSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNV 463
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SWT++++G N S EA+ F M + ++P+ TL SV+S+CA + +L G + H
Sbjct: 464 ISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEIHAH 522
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+L TGL + NAL+ Y +CG +E + FN +D SW L++GYA+ GK
Sbjct: 523 ALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE-KDVASWNILLTGYAQQGKGGLA 581
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++LF KM+ + PDE+T +L ACSR+G+V G YFE M ++ I P HY ++D
Sbjct: 582 VELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVD 641
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAGRLE+A FI KMP PD W LL++CRI+ NVE+G+ AA+ + E+D +
Sbjct: 642 LLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGY 701
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
Y+LL ++YA GKWD V+++R+ MRE + DPGCSW++ +VH F D P +I
Sbjct: 702 YILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEI 761
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
A LE KM G S D++ S K ++ HSE+LAIAFGL+ PG PI V
Sbjct: 762 NAVLEGFYEKMEATGLSMSKDSRRDDIDAS-KAEIFCGHSERLAIAFGLINTVPGTPIWV 820
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGD 645
KNL +C +CHN K+ISK+ +R I VRD +FH FK+G CSCGD
Sbjct: 821 TKNLYMCENCHNTVKFISKVVRRGISVRDTEQFHHFKDGVCSCGD 865
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 143/456 (31%), Positives = 233/456 (51%), Gaps = 44/456 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D SWN+L+ G+A G ++A+ +Y+ ML G+ TF +L +
Sbjct: 155 MAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGI-RPDVYTFPCVLRTCGGLPDLAR 213
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR++H H++++GF S V V + L+ MY K G I+ A
Sbjct: 214 GREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSA------------------------ 249
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
R +F M +D ISW MI+G +N + E + LF MR + D T SV
Sbjct: 250 -------RLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSV 302
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
++AC L G+++H ++I+ V V ++L+ M+ AE VF M +K++
Sbjct: 303 ISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDL 362
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWTAM+ GY +NG E+AV+ + M+ G+ PD+ T+ SV+S+CA L L++G H
Sbjct: 363 VSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEF 422
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ TGL S++ V+N+L+ Y KC I+ + +F+ + ++ +SWT+++ G ++ E
Sbjct: 423 ADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEA 482
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR----HYFEIMVKEYGIRPIHDHYT 416
+ F++M+ LKP+ VTL+ VLSAC+R G + G+ H + G P
Sbjct: 483 LFFFQQMIL-SLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLP-----N 536
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
++D+ R GR+E A + N D W LL+
Sbjct: 537 ALLDMYVRCGRMEPAWNQFNSC--EKDVASWNILLT 570
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 216/400 (54%), Gaps = 17/400 (4%)
Query: 112 NTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLA 171
N +++ +R G + E+ +F M ++D SW ++ G + G EA++L+ M G+
Sbjct: 133 NALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIR 192
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
D +TF VL CGGL L G+++H +IR + +V V +AL+ MY KC I A V
Sbjct: 193 PDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLV 252
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASL 291
F M ++ +SW AM+ GY +N E +++F M+ ++PD T+ SVIS+C L
Sbjct: 253 FDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDE 312
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
G + HG + TG ++ ++V+N+L+ + G +++ +F++M +D VSWTA++SGY
Sbjct: 313 RLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGY 372
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
K G + ++ + M G+ PDE+T+ VLSAC+ GL++KG IM+ E+ R
Sbjct: 373 EKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKG-----IMLHEFADRTG 427
Query: 412 HDHYT----CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRI-HGNVEIGKWA 466
Y +ID+ S+ +++A +++P + I W +++ R+ + + E +
Sbjct: 428 LTSYVIVANSLIDMYSKCRCIDKALEVFHRIP-NKNVISWTSIILGLRLNYRSFEALFFF 486
Query: 467 AESLLELDPYNPASYVLLSSIYA-----SKGKWDHVSQLR 501
+ +L L P N + V + S A S GK H LR
Sbjct: 487 QQMILSLKP-NSVTLVSVLSACARIGALSCGKEIHAHALR 525
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 160/309 (51%), Gaps = 3/309 (0%)
Query: 150 MQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNV 209
++ LE+ I L L+ +++++ T+ ++L C A EG ++H+++ + + V
Sbjct: 71 LKGDLEKALIHLDSMQELQ-VSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGV 129
Query: 210 FVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN 269
+G+AL+ M+ + + A VF MA +++ SW ++ GY + G +EA+ ++ M
Sbjct: 130 RLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWV 189
Query: 270 GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
GI PD +T V+ +C L L G + H + G S + V NAL+T Y KCG+I +
Sbjct: 190 GIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSA 249
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
+F+ M RD +SW A++SGY + E + LF M + PD +T+ V+SAC
Sbjct: 250 RLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEAL 309
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
G GR ++K + + + + +I + S G +EA+ +KM F D + W
Sbjct: 310 GDERLGREVHGYVIKTGFVAEVSVNNS-LIQMHSSVGCWDEAEMVFSKMEF-KDLVSWTA 367
Query: 450 LLSSCRIHG 458
++S +G
Sbjct: 368 MISGYEKNG 376
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 242/642 (37%), Positives = 367/642 (57%), Gaps = 42/642 (6%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
+ WN +I + + +D + +++ ++ + L + T ++ + V G+QIHG
Sbjct: 79 IHWNTIIKCYVENQFSHDGIVLFHELVHEYLPD--NFTLPCVIKGCARLGVVQEGKQIHG 136
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
LK GFGS VFV LV+MY+K G I A++ FD + +K++V++N++I G R G ++
Sbjct: 137 LALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDI 196
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+ +LF M ++D+ SWT ++ GL + G A LF +M
Sbjct: 197 ALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCR------------------ 238
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
N+ +A+++ Y K A +F M ++V+W M
Sbjct: 239 ---------------------NLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLM 277
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ GY NG +AVK+F M + G P TL SV+S+ + LA L +G H G
Sbjct: 278 IAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGF 337
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ +L+ Y KCG IE + +F + + WTA++ G G AN + LF +
Sbjct: 338 ELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLE 397
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M GLKP+ + IGVL+AC+ AGLV+ GR YF++M+ EY I P +HY C++DIL RAG
Sbjct: 398 MCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAG 457
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
LEEAK+ I MP P+ + W +LL R HG ++IG++AA+ ++E+ P Y+LLS+
Sbjct: 458 HLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSN 517
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
+YA+ G W+ VS +R M ++G RKDPGCS +++K +H F D S P + +IYA++ +
Sbjct: 518 MYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSE 577
Query: 547 LNRKMIKEGYVPDMSSVLHDVE-LSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
+ K+ G+VPD + VL +E EK L +HSE+LAIAFGL+ + PG+PIR++KNLR
Sbjct: 578 MKEKLKCVGHVPDTTQVLLCIEGEKEKEAELENHSERLAIAFGLINVKPGIPIRIMKNLR 637
Query: 606 VCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VC+DCH+ TK +SKI REI+VRD RFH FKNG CSC D+W
Sbjct: 638 VCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSCSCMDYW 679
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 183/398 (45%), Gaps = 42/398 (10%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
Q+H LK ++ FV S L+ +Y+ P+ N + Y
Sbjct: 30 EQLHAFSLKTAIFNHPFVSSRLLALYSD--------------PKINDLGY---------- 65
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
+R +F ++ + I W T+I ++N + I LF E+ E L D FT V+
Sbjct: 66 -----ARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYLP-DNFTLPCVI 119
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
C L ++EGKQIH ++ +VFV +LV+MY KC I A VF M K+VV
Sbjct: 120 KGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVV 179
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
W +++ GY + G + A+++F M E D F+ ++ + +E + +
Sbjct: 180 LWNSLIDGYARCGEIDIALQLFEEMP----ERDAFSWTVLVDGLSKCGKVESARKLFDQM 235
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
L+S+ NA++ Y K G+ + + LF +M + D V+W +++GY G+ + +
Sbjct: 236 PCRNLVSW----NAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAV 291
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
+F ML G +P TL+ VLSA S ++ KGR M K G T +I++
Sbjct: 292 KMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKN-GFELDGILGTSLIEM 350
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIG-WATLLSSCRIHG 458
++ G +E A + + +G W ++ IHG
Sbjct: 351 YAKCGCIESALTVFRAI--QKKKVGHWTAIIVGLGIHG 386
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 158/322 (49%), Gaps = 25/322 (7%)
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYC--KCKSIKYAESVFRTMAWKNVVSW 243
GL A +E +Q+HAF ++ ++ FV S L+ +Y K + YA S+F + ++++ W
Sbjct: 22 GLCAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHW 81
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
++ Y +N S + + +F + + PD+FTL VI CA L ++EG Q HG +L
Sbjct: 82 NTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIHGLALK 140
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
G S + V +LV Y KCG I+ + ++F+ M +D V W +L+ GYA+ G+ + + L
Sbjct: 141 IGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQL 200
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD--HYTCMIDI 421
FE+M D + ++ S+ G VE R F+ M P + + MI+
Sbjct: 201 FEEMPER----DAFSWTVLVDGLSKCGKVESARKLFDQM-------PCRNLVSWNAMING 249
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
++G + A +MP D + W +++ ++G +L+L P+
Sbjct: 250 YMKSGDFDSALELFYQMPI-WDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGS-RPSHA 307
Query: 482 VLLSSIYA-------SKGKWDH 496
L+S + A KG+W H
Sbjct: 308 TLVSVLSAVSGLAVLGKGRWIH 329
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 119/257 (46%), Gaps = 36/257 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V+WNL+I+G+ +G DAVK++ +MLK G S T ++L S +
Sbjct: 266 MPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLG-SRPSHATLVSVLSAVSGLAVLGK 324
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR IH ++ K GF +G+ L++MYAK G I
Sbjct: 325 GRWIHSYMEKNGFELDGILGTSLIEMYAKCGCI--------------------------- 357
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
E + +FR ++ K WT +I GL +G+ A+ LF EM GL + F V
Sbjct: 358 ----ESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGV 413
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVG--SALVDMYCKCKSIKYAESVFRTMAWK 238
L AC +++G+Q ++ N++K + LVD+ C+ ++ A++ M
Sbjct: 414 LNACNHAGLVDDGRQYFDMMM-NEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPIS 472
Query: 239 -NVVSWTAMLVGYGQNG 254
N V W ++L G +G
Sbjct: 473 PNKVIWMSLLGGSRNHG 489
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 244/642 (38%), Positives = 365/642 (56%), Gaps = 32/642 (4%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLM-LKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIH 65
VSWN +I ++ G V + + M +++ L ++ +T +L + R +H
Sbjct: 380 VSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALH 439
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
G+ L+ F + + + YAK G + A+
Sbjct: 440 GYSLRHSFQYKELINNAFIAAYAKCGSLVFAEH--------------------------- 472
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
+F GM K SW +I G QNG +A+D + EM G+ D F+ S+L ACG
Sbjct: 473 ----VFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACG 528
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
L L+ GK+IH F++RN + N FV +L+ +Y C Y + F M KN V W A
Sbjct: 529 RLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNA 588
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
ML GY QN EA+ +F M +G+EPD+ + S++ +C+ L++L G + H +L
Sbjct: 589 MLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNS 648
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
L+ V+ +L+ Y K G + S R+FN +N ++ SW +++G+ G+ N+ ++LFE
Sbjct: 649 LMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFE 708
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
M +PD T +GVL AC AGLV +G +Y M Y + P +HY C+ID+L RA
Sbjct: 709 DMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRA 768
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
GRL EA +FIN+MP PDA W++LLSS + ++E+G+ AE LL L+ SY+LLS
Sbjct: 769 GRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLS 828
Query: 486 SIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELE 545
++YA+ GKWD V +R+ M++ ++KD GCSWI+ + +V+ F A + S+P SD+I
Sbjct: 829 NLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWN 888
Query: 546 KLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
+L +++++ GY PD S VLH++E EK K+L HSEK+AI FG L G +R+ KNLR
Sbjct: 889 RLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLR 948
Query: 606 VCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+C DCHNA KYISK +REI++RD RFH FK G CSCGD+W
Sbjct: 949 ICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSCGDYW 990
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 134/466 (28%), Positives = 231/466 (49%), Gaps = 44/466 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRI-TFSTMLIMSSSRRCVD 59
MP + +SWN LI G + +G +A + + +L+ G G + + T T+L + S VD
Sbjct: 271 MPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVD 330
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+G IHG +K G + V + L+DMY+K G +
Sbjct: 331 VGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCL-------------------------- 364
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG--LAMDQFTF 177
E+ LFR +++K +SW +MI + G E DL R+M +E + +++ T
Sbjct: 365 -----SEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTI 419
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
++L AC L + +H + +R+ + + +A + Y KC S+ +AE VF M
Sbjct: 420 LNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNT 479
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
K+V SW A++ G+ QNG +A+ + M R GI PDDF++ S++ +C L L+ G +
Sbjct: 480 KSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEI 539
Query: 298 HGRSLVTGLI--SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
HG L GL SF+ VS L++ Y C F M ++ V W A++SGY++
Sbjct: 540 HGFVLRNGLEMNSFVAVS--LLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNE 597
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
NE + LF +MLS GL+PDE+ + +L ACS+ + G+ +K + D++
Sbjct: 598 LPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKN---SLMEDNF 654
Query: 416 TC--MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
++D+ +++G L ++ N++ + W +++ +HG
Sbjct: 655 VACSLMDMYAKSGFLGHSQRIFNRLN-GKEVASWNVMITGFGVHGQ 699
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 134/541 (24%), Positives = 240/541 (44%), Gaps = 71/541 (13%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
WN L+SG+ + ++A+ + ++ TF ++ + + + LG+ +HG
Sbjct: 176 QWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGM 235
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
+K G +FVG+ ++ +Y K G + +A FD++PE+N++ +N++I G G E+
Sbjct: 236 AVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEA 295
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
R FR L+++G +GL D T ++L C G
Sbjct: 296 YRAFR---------------SLLESG--------------DGLIPDVATMVTLLPVCSGE 326
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
++ G IH ++ + V +AL+DMY KC + A +FR + K+VVSW +M+
Sbjct: 327 GNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMI 386
Query: 248 VGYGQNGCSEEAVKIFCN--MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
Y + G E + M+ +E ++ T+ +++ +C + L HG SL
Sbjct: 387 GAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHS 446
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
++NA + Y KCG++ + +F MN + SW A++ G+A+ G + +D +
Sbjct: 447 FQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYF 506
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH-----------------------YFEIM 402
+M G+ PD+ +++ +L AC R GL++ G+ YF
Sbjct: 507 EMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCS 566
Query: 403 VKEYGI----RPIHDHYTCMIDILSRAGRLE---EAKSFINKM---PFPPDAIGWATLLS 452
YG R + C +LS + E EA S +M PD I A++L
Sbjct: 567 KPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILG 626
Query: 453 SCRIHGNVEIGK----WAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
+C + +GK +A ++ L D + S L +YA G H ++ + K
Sbjct: 627 ACSQLSALGLGKEVHCFALKNSLMEDNFVACS---LMDMYAKSGFLGHSQRIFNRLNGKE 683
Query: 509 V 509
V
Sbjct: 684 V 684
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 155/285 (54%), Gaps = 5/285 (1%)
Query: 107 NIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM- 165
+ V+ +IT G ESR +F + +K+ W +++G ++N L EAI F E+
Sbjct: 142 DFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELI 201
Query: 166 RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI 225
+ D FTF ++ AC G + GK +H ++ ++FVG+A++ +Y KC +
Sbjct: 202 SVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFL 261
Query: 226 KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR--NGIEPDDFTLGSVIS 283
A +F M +N++SW +++ G+ +NG EA + F ++ +G+ PD T+ +++
Sbjct: 262 DEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLP 321
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
C+ +++ G HG ++ GL+ + V NAL+ Y KCG + ++ LF ++ + VS
Sbjct: 322 VCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVS 381
Query: 344 WTALVSGYAKFGKANETIDLFEKML--SHGLKPDEVTLIGVLSAC 386
W +++ Y++ G ET DL KM ++ +EVT++ +L AC
Sbjct: 382 WNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPAC 426
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 152/317 (47%), Gaps = 16/317 (5%)
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFV-GSALVDMYCKCKSIKYA 228
LA + G +L CG +E G+++ + + FV + L+ MY C +
Sbjct: 103 LAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLES 162
Query: 229 ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCAN 287
VF + KN+ W A++ GY +N +EA+ F + +PD+FT +I +C
Sbjct: 163 RLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTG 222
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
+ G HG ++ GLI + V NA++ YGKCG ++++ LF++M ++ +SW +L
Sbjct: 223 KCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSL 282
Query: 348 VSGYAKFGKANETIDLFEKMLSH--GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE 405
+ G+++ G E F +L GL PD T++ +L CS G V+ G + VK
Sbjct: 283 IRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVK- 341
Query: 406 YGIRPIHDHYTC--MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG----- 458
+ +H+ C +ID+ S+ G L EA K+ + W +++ + G
Sbjct: 342 --LGLVHELMVCNALIDMYSKCGCLSEAAILFRKIE-NKSVVSWNSMIGAYSREGFVFET 398
Query: 459 -NVEIGKWAAESLLELD 474
++ W E L+E++
Sbjct: 399 FDLLRKMWMEEELMEVN 415
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 5/166 (3%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
+ V WN ++SG++ + N+A+ ++ ML DGL I +++L S + LG+++
Sbjct: 582 NSVCWNAMLSGYSQNELPNEALSLFRQMLSDGL-EPDEIAIASILGACSQLSALGLGKEV 640
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H LK FV L+DMYAK G + ++R F+ L K + +N MITG G
Sbjct: 641 HCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQG 700
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQ----NGLEREAIDLFREMR 166
++ LF MK D G++Q GL E ++ +M+
Sbjct: 701 NKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQ 746
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/642 (36%), Positives = 371/642 (57%), Gaps = 35/642 (5%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN +I G+A + S + A+ +Y ML G T+ +L ++GR++H +
Sbjct: 92 WNSMIRGYACNNSPSRALFLYLKMLHFG-QKPDNFTYPFVLKACGDLLLREMGRKVHALV 150
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+ G V+VG+ ++ MY K G VE +R
Sbjct: 151 VVGGLEEDVYVGNSILSMYFKFGD-------------------------------VEAAR 179
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
+F M +D SW TM++G ++NG R A ++F +MR +G D+ T ++L+ACG ++
Sbjct: 180 VVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVM 239
Query: 189 ALEEGKQIHAFIIRNDHKDNV---FVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
L+ GK+IH +++RN V F+ ++++DMYC C+S+ A +F + K+VVSW +
Sbjct: 240 DLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNS 299
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
++ GY + G + +A+++F M G PD+ T+ SV+++C +++L G + G
Sbjct: 300 LISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRG 359
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
+ + V AL+ Y CG++ + R+F+EM ++ + T +V+G+ G+ E I +F
Sbjct: 360 YVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFY 419
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
+ML G+ PDE VLSACS +GLV++G+ F M ++Y + P HY+C++D+L RA
Sbjct: 420 EMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRA 479
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
G L+EA + I M P+ W LLS+CR+H NV++ +A+ L EL+P + YV LS
Sbjct: 480 GYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLS 539
Query: 486 SIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELE 545
+IYA++ +W+ V +R + ++ +RK P S+++ VH F D S SD IYA+L+
Sbjct: 540 NIYAAERRWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDIYAKLK 599
Query: 546 KLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
LN ++ K GY PD S VL+DVE K KML HSE+LA+AF L+ PG IR+ KNLR
Sbjct: 600 DLNEQLKKAGYKPDTSLVLYDVEEEIKEKMLWDHSERLALAFALINTGPGTTIRITKNLR 659
Query: 606 VCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VC DCH K ISK+T REI++RD RFH F++G CSCG +W
Sbjct: 660 VCGDCHTVIKMISKLTNREIIMRDICRFHHFRDGLCSCGGYW 701
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 180/322 (55%), Gaps = 6/322 (1%)
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G + ++ +F + K+S W +MI G N A+ L+ +M G D FT+ VL
Sbjct: 72 GHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVL 131
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
ACG LL E G+++HA ++ +++V+VG++++ MY K ++ A VF M +++
Sbjct: 132 KACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLT 191
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG-- 299
SW M+ G+ +NG + A ++F +M+R+G D TL +++S+C ++ L+ G + HG
Sbjct: 192 SWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYV 251
Query: 300 -RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
R+ +G + + N+++ Y C ++ + +LF + V+D VSW +L+SGY K G A
Sbjct: 252 VRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAF 311
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE-YGIRPIHDHYTC 417
+ ++LF +M+ G PDEVT+I VL+AC++ + G +VK Y + + T
Sbjct: 312 QALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVG--TA 369
Query: 418 MIDILSRAGRLEEAKSFINKMP 439
+I + + G L A ++MP
Sbjct: 370 LIGMYANCGSLVCACRVFDEMP 391
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 176/355 (49%), Gaps = 37/355 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D SWN ++SG +G A +V+ M +DG R T +L + +
Sbjct: 185 MLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVG-DRTTLLALLSACGDVMDLKV 243
Query: 61 GRQIHGHILKFGFGSYV---FVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
G++IHG++++ G V F+ + ++DMY + A++ F+ L K++V +N++I+G
Sbjct: 244 GKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISG 303
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
+ G D+ +A++LF M + G D+ T
Sbjct: 304 YEKCG---------------DAF----------------QALELFGRMVVVGAVPDEVTV 332
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
SVL AC + AL G + +++++ + NV VG+AL+ MY C S+ A VF M
Sbjct: 333 ISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPE 392
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ- 296
KN+ + T M+ G+G +G EA+ IF M G+ PD+ +V+S+C++ ++EG +
Sbjct: 393 KNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEI 452
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
F+ + + T + LV G+ G +++++ + M ++ +E WTAL+S
Sbjct: 453 FYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSA 507
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 138/290 (47%), Gaps = 18/290 (6%)
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESV 231
D G++L + +L + Q+HA + + N ++ + L Y C + YA+ +
Sbjct: 21 DSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHI 80
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASL 291
F + KN W +M+ GY N A+ ++ M G +PD+FT V+ +C +L
Sbjct: 81 FDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLR 140
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
E G + H +V GL + V N++++ Y K G++E + +F+ M VRD SW ++SG+
Sbjct: 141 EMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGF 200
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR--HYFEIMVKEYG-- 407
K G+A ++F M G D TL+ +LSAC ++ G+ H + + E G
Sbjct: 201 VKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRV 260
Query: 408 -----IRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ I D Y C + +S A +L E D + W +L+S
Sbjct: 261 CNGFLMNSIIDMY-CNCESVSCARKLFEGLRV-------KDVVSWNSLIS 302
>gi|357133649|ref|XP_003568436.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Brachypodium distachyon]
Length = 610
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 242/618 (39%), Positives = 347/618 (56%), Gaps = 62/618 (10%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
R+ H ++K G + + LV YAK L+ D + FDE P +++ +Y++++ +
Sbjct: 23 RRAHARLIKEGLAQHPPAPALLVSAYAKSRLLPDTRLLFDETPRRDLHLYSSLLAAVSHS 82
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
E L R M D+ L D F S+
Sbjct: 83 ESPELVLPLLRRMLSADA------------------------------LRPDHFVLASIA 112
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+A L +L GKQ+H + + + + V S+L+DMYCKC A VF ++ KN V
Sbjct: 113 SATARLRSLCLGKQLHGHFVASPYSSDDVVKSSLIDMYCKCGVPDDARKVFDSIVAKNSV 172
Query: 242 SWTAMLVGYGQNGCSEEA-------------------------------VKIFCNMQRNG 270
WTA++ GY NG S+EA VK+F +M+R+G
Sbjct: 173 MWTALISGYVLNGRSDEALELFRSMPGRTLFAWTALISGFVRSGESVSAVKLFVDMRRDG 232
Query: 271 IEPDD-FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
+ DD F L S I A+LA+ G Q H ++ G S + V NA+V Y KC +I +
Sbjct: 233 VSIDDAFVLSSAIGGAADLAAHVLGRQLHSLTMRLGFSSSMIVGNAVVDMYSKCSDIHSA 292
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
+F E+ RD +SWT ++ G A+ G+A E L+++M+ G+KP+EVT +G++ ACS A
Sbjct: 293 REVFEEITGRDIISWTTMLVGEAQHGRAEEAFSLYDRMVLAGVKPNEVTFVGLIYACSHA 352
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
GLV+KGR F+ M EYGI P HYTC +D+LSR+G L EA+ I MP+ PD WA+
Sbjct: 353 GLVQKGRQLFDSMKGEYGINPRLQHYTCYLDLLSRSGHLAEAEELITTMPYVPDEATWAS 412
Query: 450 LLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
LLS+C+ + N E+ A++LLEL P P++YVLLS++YA GKWD V +R+ M + +
Sbjct: 413 LLSACKKYNNAEMSIRVADNLLELRPKYPSTYVLLSNVYAVNGKWDSVDTVRKLMADMEI 472
Query: 510 RKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVEL 569
RK+PG SWI+ +F A + ++I LE+L +M + GYVPD SSV+HD+E
Sbjct: 473 RKEPGYSWIEVGREFRLFHAGEVPIDLREEILGFLEELVSEMRQRGYVPDTSSVMHDLEE 532
Query: 570 SEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRD 629
EK L HSE+LA+AFG+L P G IRVVKNLRVC+DCH K+IS+I QR+I+VRD
Sbjct: 533 HEKEHHLCLHSERLAVAFGILRSPLGSVIRVVKNLRVCNDCHTVMKFISEIFQRKIIVRD 592
Query: 630 AVRFHLFKNGECSCGDFW 647
A RFH F+ G+CSC +FW
Sbjct: 593 ASRFHHFEGGKCSCSEFW 610
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 177/322 (54%), Gaps = 5/322 (1%)
Query: 56 RCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
R + LG+Q+HGH + + S V S L+DMY K G+ DA++ FD + KN VM+ +I
Sbjct: 119 RSLCLGKQLHGHFVASPYSSDDVVKSSLIDMYCKCGVPDDARKVFDSIVAKNSVMWTALI 178
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ- 174
+G + G +E+ LFR M + +WT +I+G +++G A+ LF +MR +G+++D
Sbjct: 179 SGYVLNGRSDEALELFRSMPGRTLFAWTALISGFVRSGESVSAVKLFVDMRRDGVSIDDA 238
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
F S + L A G+Q+H+ +R ++ VG+A+VDMY KC I A VF
Sbjct: 239 FVLSSAIGGAADLAAHVLGRQLHSLTMRLGFSSSMIVGNAVVDMYSKCSDIHSAREVFEE 298
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
+ ++++SWT MLVG Q+G +EEA ++ M G++P++ T +I +C++ +++G
Sbjct: 299 ITGRDIISWTTMLVGEAQHGRAEEAFSLYDRMVLAGVKPNEVTFVGLIYACSHAGLVQKG 358
Query: 295 TQ-FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN-VRDEVSWTALVSGYA 352
Q F G+ + + + G++ ++ L M V DE +W +L+S
Sbjct: 359 RQLFDSMKGEYGINPRLQHYTCYLDLLSRSGHLAEAEELITTMPYVPDEATWASLLSACK 418
Query: 353 KFGKANETIDLFEKMLSHGLKP 374
K+ A +I + + +L L+P
Sbjct: 419 KYNNAEMSIRVADNLLE--LRP 438
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 157/373 (42%), Gaps = 70/373 (18%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP +W LISG G AVK++ M +DG+ S+ + ++ L
Sbjct: 197 MPGRTLFAWTALISGFVRSGESVSAVKLFVDMRRDGVSIDDAFVLSSAIGGAADLAAHVL 256
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H ++ GF S + VG+ +VDMY+K I+ A+ F+E+ ++I+ + TM
Sbjct: 257 GRQLHSLTMRLGFSSSMIVGNAVVDMYSKCSDIHSAREVFEEITGRDIISWTTM------ 310
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ G Q+G EA L+ M L G+ ++ TF +
Sbjct: 311 -------------------------LVGEAQHGRAEEAFSLYDRMVLAGVKPNEVTFVGL 345
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVG--SALVDMYCKCKSIKYAESVFRTMAW- 237
+ AC +++G+Q+ ++ ++ N + + +D+ + + AE + TM +
Sbjct: 346 IYACSHAGLVQKGRQLFDS-MKGEYGINPRLQHYTCYLDLLSRSGHLAEAEELITTMPYV 404
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
+ +W ++L + +E ++++ N+ LE ++
Sbjct: 405 PDEATWASLLSACKKYNNAEMSIRVADNL------------------------LELRPKY 440
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE--VSWTALVSGYAKFG 355
+++ +SN + GK +++ +L +M +R E SW + + F
Sbjct: 441 PS--------TYVLLSN-VYAVNGKWDSVDTVRKLMADMEIRKEPGYSWIEVGREFRLFH 491
Query: 356 KANETIDLFEKML 368
IDL E++L
Sbjct: 492 AGEVPIDLREEIL 504
>gi|302786698|ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
gi|300157279|gb|EFJ23905.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
Length = 485
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/485 (43%), Positives = 323/485 (66%), Gaps = 2/485 (0%)
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M + G+ ++ T+ +VL+ +LEEG+++H+ + + +V VG+ALV+MY KC+S
Sbjct: 1 MEIRGVERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQS 60
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM--QRNGIEPDDFTLGSVI 282
++ A + F ++ NVVSW+AML Y QNG + A++++ M R G+ P+ T +++
Sbjct: 61 VEEARAAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLL 120
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
+C+ L +L EG + H G + + V NALV FYG+CG++ D+ +F+ M RD +
Sbjct: 121 DACSFLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVI 180
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
SW++++S +A+ G+ +E ++L+ +MLS G PD++ I VL ACS +G+VE +F +
Sbjct: 181 SWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSI 240
Query: 403 VKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
V + + P +HY CM+D+L RAG+L +A+ + MPF P + + T+LS+C+++ +VE
Sbjct: 241 VGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVER 300
Query: 463 GKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKS 522
G+ AAE + ELDP N + Y+ L++IY++ + +++R+ M E+G++K PGCSWI+
Sbjct: 301 GEAAAEVVFELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLD 360
Query: 523 RVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEK 582
RVH F A D P D+IYAE+++L R+M + GY D VL DVE EK +L +HSEK
Sbjct: 361 RVHEFIAGDKMHPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEK 420
Query: 583 LAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECS 642
LAIAFGL+ PPG P+R+VKNLRVCSDCH ATK ISK+T REILVRD RFH F +G CS
Sbjct: 421 LAIAFGLISTPPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFLDGMCS 480
Query: 643 CGDFW 647
C D+W
Sbjct: 481 CNDYW 485
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 106/234 (45%), Gaps = 35/234 (14%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLM--LKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
VSW+ +++ +A +G A+++Y M + G+ +R+TF T+L S + GR+I
Sbjct: 77 VSWSAMLAAYAQNGHARMALELYREMGSARKGMAP-NRVTFITLLDACSFLGALAEGRKI 135
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H + + GF + + V + LV+ Y + G + DAK FD
Sbjct: 136 HAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFD----------------------- 172
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
GM+ +D ISW++MI+ Q G EA++L+ M EG D F SVL AC
Sbjct: 173 --------GMRRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFAC 224
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSA-LVDMYCKCKSIKYAESVFRTMAW 237
+E I+ + + A +VD+ + ++ AE + R M +
Sbjct: 225 SNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPF 278
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 251/677 (37%), Positives = 372/677 (54%), Gaps = 63/677 (9%)
Query: 25 AVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLV 84
A +Y ML + LG T+ ++ S RR +Q+H H+LK GF S V+V + L+
Sbjct: 197 AFTLYKSMLSNYLGA-DNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLI 255
Query: 85 DM-------------------------------YAKLGLIYDAKRGFDELPEKNIVMYNT 113
+ Y ++G + +AK + ++PE++I+ N+
Sbjct: 256 NCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNS 315
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
MI RGLV E+ +LF M +KD ++W+ +I QN + EAI F M G+ +D
Sbjct: 316 MIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVD 375
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYA----- 228
+ S L+AC LL + GK IH+ ++ + + + +AL+ MY KC I A
Sbjct: 376 EVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFD 435
Query: 229 --------------------------ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKI 262
+++F +M K+VVSW++M+ GY QN +E + +
Sbjct: 436 EAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLAL 495
Query: 263 FCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGK 322
F MQ +G +PD+ TL SVIS+CA LA+LE+G H GL + + L+ Y K
Sbjct: 496 FQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMK 555
Query: 323 CGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGV 382
CG +E + +F M + +W AL+ G A G ++D+F M + P+E+T +GV
Sbjct: 556 CGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGV 615
Query: 383 LSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPP 442
L AC GLV++G+H+F M+ ++ I+P HY CM+D+L RAG+L+EA+ +N+MP P
Sbjct: 616 LGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTP 675
Query: 443 DAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRR 502
D W LL +C+ HG+ E+G+ L+EL P + +VLLS+IYASKGKWD V ++R
Sbjct: 676 DVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRG 735
Query: 503 TMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSS 562
M + V K PGCS I+ +H F A D + P D I L ++ K+ EGY PD++
Sbjct: 736 MMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINE 795
Query: 563 VLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQ 622
VL DV+ EK L HSEKLAIAFGL+ I P PIR++KNLR+C+DCH A K ISK
Sbjct: 796 VLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFC 855
Query: 623 REILVRDAVRFHLFKNG 639
R+I+VRD RFH F+ G
Sbjct: 856 RKIVVRDRHRFHHFEQG 872
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 212/374 (56%), Gaps = 7/374 (1%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+W+ LI+ + +A++ + M K G+ + + + L ++ V++G+ I
Sbjct: 340 DMVTWSALIACFQQNEMYEEAIRTFVGMHKIGV-MVDEVVAVSALSACANLLVVNMGKLI 398
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H LK G SY+ + + L+ MY+K G I A++ FDE +++ +N+MI+G L+ LV
Sbjct: 399 HSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLV 458
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ ++ +F M +KD +SW++MI+G QN L E + LF+EM++ G D+ T SV++AC
Sbjct: 459 DNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISAC 518
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L ALE+GK +HA+I RN NV +G+ L+DMY KC ++ A VF M K + +W
Sbjct: 519 ARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWN 578
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
A+++G NG E ++ +F NM++ + P++ T V+ +C ++ ++EG Q H S++
Sbjct: 579 ALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEG-QHHFYSMIH 637
Query: 305 G--LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV-SWTALVSGYAKFGKANETI 361
+ + +V G+ G ++++ L N M + +V +W AL+ K G +
Sbjct: 638 DHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGR 697
Query: 362 DLFEKMLSHGLKPD 375
+ K++ L+PD
Sbjct: 698 RVGRKLIE--LQPD 709
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 36/260 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSW+ +ISG+A + ++ + ++ M G T +++ + ++
Sbjct: 468 MPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKP-DETTLVSVISACARLAALEQ 526
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +H +I + G V +G+ L+DMY K G + A F + EK I +N +I GL
Sbjct: 527 GKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAM 586
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GLVE S +D+F M+ + ++ TF V
Sbjct: 587 NGLVESS-------------------------------LDMFSNMKKCHVTPNEITFMGV 615
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHK--DNVFVGSALVDMYCKCKSIKYAESVFRTMAW- 237
L AC + ++EG Q H + + +DHK NV +VD+ + ++ AE + M
Sbjct: 616 LGACRHMGLVDEG-QHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMT 674
Query: 238 KNVVSWTAMLVGYGQNGCSE 257
+V +W A+L ++G SE
Sbjct: 675 PDVATWGALLGACKKHGDSE 694
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 16/221 (7%)
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
Y Q A ++ +M N + D++T +I +C+ S E Q H L G S
Sbjct: 187 AYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDS 246
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
+ V N L+ + C N+ D+ R+FNE +V D VSW ++++GY + G E ++ +M
Sbjct: 247 DVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMP 306
Query: 369 SHGLKPDE--VTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
+ + L G+ R +VE + + E++ K+ ++ +I +
Sbjct: 307 ERSIIASNSMIVLFGM-----RGLVVEACKLFDEMLEKDMVT------WSALIACFQQNE 355
Query: 427 RLEEA-KSFI--NKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
EEA ++F+ +K+ D + + LS+C V +GK
Sbjct: 356 MYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGK 396
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/608 (37%), Positives = 363/608 (59%), Gaps = 36/608 (5%)
Query: 42 RITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFD 101
R ++T+L + + + GR +H HIL+ F + +G+ L++MYAK
Sbjct: 60 RRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC----------- 108
Query: 102 ELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDL 161
G +EE+R++F M +D ++WTT+I+G Q+ +A+
Sbjct: 109 --------------------GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLF 148
Query: 162 FREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK 221
F +M G + ++FT SV+ A G Q+H F ++ NV VGSAL+D+Y +
Sbjct: 149 FNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTR 208
Query: 222 CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
+ A+ VF + +N VSW A++ G+ + +E+A+++F M R+G P F+ S+
Sbjct: 209 YGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASL 268
Query: 282 ISSCANLASLEEGTQFHGRSLVTG--LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
+C++ LE+G H + +G L++F N L+ Y K G+I D+ ++F+ + R
Sbjct: 269 FGACSSTGFLEQGKWVHAYMIKSGEKLVAF--AGNTLLDMYAKSGSIHDARKIFDRLAKR 326
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
D VSW +L++ YA+ G E + FE+M G++P+E++ + VL+ACS +GL+++G HY+
Sbjct: 327 DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYY 386
Query: 400 EIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
E+M K+ GI P HY ++D+L RAG L A FI +MP P A W LL++CR+H N
Sbjct: 387 ELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKN 445
Query: 460 VEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIK 519
E+G +AAE + ELDP +P +V+L +IYAS G+W+ +++R+ M+E GV+K+P CSW++
Sbjct: 446 TELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVE 505
Query: 520 YKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHH 579
++ +H+F A+D P ++I + E++ K+ + GYVPD S V+ V+ E+ L +H
Sbjct: 506 IENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYH 565
Query: 580 SEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNG 639
SEK+A+AF LL PPG I + KN+RVC DCH A K SK+ REI+VRD RFH FK+G
Sbjct: 566 SEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDG 625
Query: 640 ECSCGDFW 647
CSC D+W
Sbjct: 626 NCSCKDYW 633
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 181/351 (51%), Gaps = 33/351 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V+W LISG++ H DA+ +N ML+ G + T S+++ +++ R
Sbjct: 121 MPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSP-NEFTLSSVIKAAAAERRGCC 179
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+HG +K GF S V VGS L+D+Y R
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYT-------------------------------R 208
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL+++++ +F ++ ++ +SW +I G + +A++LF+ M +G F++ S+
Sbjct: 209 YGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASL 268
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
AC LE+GK +HA++I++ K F G+ L+DMY K SI A +F +A ++V
Sbjct: 269 FGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDV 328
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW ++L Y Q+G +EAV F M+R GI P++ + SV+++C++ L+EG ++
Sbjct: 329 VSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYEL 388
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSG 350
G++ +V G+ G++ + R EM + + W AL++
Sbjct: 389 MKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 439
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 167/306 (54%), Gaps = 4/306 (1%)
Query: 167 LEG--LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
LEG + D+ + ++L C L +G+ +HA I+++ + ++ +G+ L++MY KC S
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
++ A VF M ++ V+WT ++ GY Q+ +A+ F M R G P++FTL SVI +
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
A G Q HG + G S + V +AL+ Y + G ++D+ +F+ + R++VSW
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
AL++G+A+ + ++LF+ ML G +P + + ACS G +E+G+ M+K
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
G + + ++D+ +++G + +A+ +++ D + W +LL++ HG +
Sbjct: 291 S-GEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQHGFGKEAV 348
Query: 465 WAAESL 470
W E +
Sbjct: 349 WWFEEM 354
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 113/246 (45%), Gaps = 14/246 (5%)
Query: 265 NMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCG 324
+++ + I D +++ C L +G H L + I + N L+ Y KCG
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 325 NIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVL- 383
++E++ ++F +M RD V+WT L+SGY++ + + + F +ML G P+E TL V+
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169
Query: 384 -SACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPP 442
+A R G H F + G + ++D+ +R G +++A+ + +
Sbjct: 170 AAAAERRGCCGHQLHGFCVKC---GFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRN 226
Query: 443 DAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA--SYVLL-----SSIYASKGKWD 495
D + W L++ E + +L D + P+ SY L S+ + +GKW
Sbjct: 227 D-VSWNALIAGHARRSGTEKALELFQGMLR-DGFRPSHFSYASLFGACSSTGFLEQGKWV 284
Query: 496 HVSQLR 501
H ++
Sbjct: 285 HAYMIK 290
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/567 (40%), Positives = 346/567 (61%), Gaps = 9/567 (1%)
Query: 83 LVDMYAK-LGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSIS 141
L+ YA+ LG + DA+ FD +P + V YNT+++ G + +RRLF M +D +S
Sbjct: 103 LLAGYARALGRLADARHLFDRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVRDVVS 162
Query: 142 WTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFII 201
W TM++GL ++G EA +F M + + ++ ++++ G + +
Sbjct: 163 WNTMVSGLSKSGAVEEAKAVFLAMPVR----NSVSWNAMVS---GFACSRDMSAAEEWFR 215
Query: 202 RNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVK 261
K + + +A+V Y ++ A F M +N+VSW A++ GY +N +++A++
Sbjct: 216 NAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALR 275
Query: 262 IFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFY 320
+F M R ++P+ TL SV+ C+NL++L G Q H + L +TV +LV+ Y
Sbjct: 276 LFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMY 335
Query: 321 GKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLI 380
KCG++ + +LF EM+ RD V+W A++SGYA+ G E I+LFE+M G++P+ +T +
Sbjct: 336 CKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFV 395
Query: 381 GVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF 440
VL+AC GL + G FE M + YGI P DHY+CM+D+L RAG+LE A I MPF
Sbjct: 396 AVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPF 455
Query: 441 PPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQL 500
P + TLL++CR++ N+E + AA L+E DP + +YV L++IYA +WD VS++
Sbjct: 456 EPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWDDVSRV 515
Query: 501 RRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDM 560
RR M++ V K PG SWI+ K +H F ++D P I+ +L +L +M GYVPD+
Sbjct: 516 RRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPDL 575
Query: 561 SSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKI 620
VLHDV+ + K++ML HSEKLAI+FGL+ PG+ +R+ KNLRVC DCHNA K ISKI
Sbjct: 576 DFVLHDVDETLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLRVCGDCHNAAKVISKI 635
Query: 621 TQREILVRDAVRFHLFKNGECSCGDFW 647
REI++RD RFH F+ G CSCGD+W
Sbjct: 636 EDREIILRDTTRFHHFRGGHCSCGDYW 662
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 172/370 (46%), Gaps = 44/370 (11%)
Query: 2 PFHDGVSWNLLISGHA-SHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
P ++N L++G+A + G + DA ++ D + ++++T+L + D
Sbjct: 93 PRKTTATYNCLLAGYARALGRLADARHLF-----DRIPTPDAVSYNTLLSCHFASGDADG 147
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
R++ + S+ + +V +K G + +AK F +P +N V +N M++G
Sbjct: 148 ARRLFASMPVRDVVSW----NTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFAC 203
Query: 121 RGLVEESRRLFRGMKDK-DSISWTTMITGLM----------------------------- 150
+ + FR +K D++ WT M++G M
Sbjct: 204 SRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAG 263
Query: 151 --QNGLEREAIDLFREM-RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKD 207
+N +A+ LFR M R + + T SVL C L AL GKQIH + ++
Sbjct: 264 YVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSR 323
Query: 208 NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQ 267
N+ VG++LV MYCKC + A +F M ++VV+W AM+ GY Q+G +EA+ +F M+
Sbjct: 324 NLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMK 383
Query: 268 RNGIEPDDFTLGSVISSCANLASLEEGTQ-FHGRSLVTGLISFITVSNALVTFYGKCGNI 326
G+EP+ T +V+++C + + G + F G + G+ + + +V + G +
Sbjct: 384 DEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKL 443
Query: 327 EDSHRLFNEM 336
E + L M
Sbjct: 444 ERAVDLIRSM 453
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 115/245 (46%), Gaps = 44/245 (17%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSWN +++G+ + +DA++++ M+++ + T S++L+ S+ +
Sbjct: 249 MPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGF 308
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIH +K + VG+ LV MY K G + A + F E+ +++V +N MI+G +
Sbjct: 309 GKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQ 368
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G +E+ LF MKD EG+ + TF +V
Sbjct: 369 HGDGKEAINLFERMKD-------------------------------EGVEPNWITFVAV 397
Query: 181 LTAC-------GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
LTAC G+ E ++++ R DH S +VD+ C+ ++ A + R
Sbjct: 398 LTACIHTGLCDFGIRCFEGMQELYGIEPRVDHY------SCMVDLLCRAGKLERAVDLIR 451
Query: 234 TMAWK 238
+M ++
Sbjct: 452 SMPFE 456
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/633 (37%), Positives = 371/633 (58%), Gaps = 37/633 (5%)
Query: 15 GHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFG 74
H + A+ V + M + G+ S IT+S ++ + V G+++H HI G+
Sbjct: 259 NHCYRRDLPSAMHVLDSMERRGVWADS-ITYSELIKCCLAHGAVREGKRVHRHIFSNGYH 317
Query: 75 SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGM 134
F+ + L++MY K L+ EE++ LF M
Sbjct: 318 PKTFLTNILINMYVKFNLL-------------------------------EEAQVLFDKM 346
Query: 135 KDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGK 194
+++ +SWTTMI+ L A+ L M +G+ + FTF SVL AC L L K
Sbjct: 347 PERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDL---K 403
Query: 195 QIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNG 254
Q+H++I++ + +VFV SAL+D+Y K + A VFR M + V W +++ + Q+
Sbjct: 404 QLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHS 463
Query: 255 CSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSN 314
+EA+ ++ +M+R G D TL SV+ +C +L+ LE G Q H V + ++N
Sbjct: 464 DGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVH--VLKFDQDLILNN 521
Query: 315 ALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKP 374
AL+ Y KCG++ED+ +FN M +D +SW+ +++G A+ G + E ++LFE M G KP
Sbjct: 522 ALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKP 581
Query: 375 DEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSF 434
+ +T++GVL ACS AGLV +G +YF M YGI P +HY CM+D+L RA +L++
Sbjct: 582 NHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKL 641
Query: 435 INKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKW 494
I++M PD + W TLL +CR NV++ +AA+ +L+LDP + +YVLLS+IYA +W
Sbjct: 642 IHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKEILKLDPQDTGAYVLLSNIYAISKRW 701
Query: 495 DHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKE 554
+ V+++RRTM+++G+RK+PGCSWI+ ++H F D S P D+I +L + ++
Sbjct: 702 NDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHAFILGDKSHPQIDEINRQLNQFICRLAGA 761
Query: 555 GYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNAT 614
GYVPD + VL D+E ++ L +HSEKLAI FG++ P IR+ KNL++C DCH
Sbjct: 762 GYVPDTNFVLQDLEGEQREDSLRYHSEKLAIVFGIMSFPKEKTIRIWKNLKICGDCHKFA 821
Query: 615 KYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
K I+++ QR I++RD +R+H F++G CSCGD+W
Sbjct: 822 KLIAELEQRHIVIRDPIRYHHFQDGVCSCGDYW 854
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/378 (31%), Positives = 196/378 (51%), Gaps = 45/378 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVND-AVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
MP + VSW +IS + S+ +ND A+++ M +DG+ + TFS+ ++ + R D
Sbjct: 346 MPERNVVSWTTMISAY-SNAQLNDRAMRLLAFMFRDGVMP-NMFTFSS--VLRACERLYD 401
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
L +Q+H I+K G S VFV S L+D+Y+K+G + +A + F E M+TG
Sbjct: 402 L-KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFRE-----------MMTG-- 447
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
DS+ W ++I Q+ EA+ L++ MR G DQ T S
Sbjct: 448 ------------------DSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTS 489
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL AC L LE G+Q H +++ D ++ + +AL+DMYCKC S++ A+ +F MA K+
Sbjct: 490 VLRACTSLSLLELGRQAHVHVLKFDQ--DLILNNALLDMYCKCGSLEDAKFIFNRMAKKD 547
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQFH 298
V+SW+ M+ G QNG S EA+ +F +M+ G +P+ T+ V+ +C++ + EG F
Sbjct: 548 VISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFR 607
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKA 357
+ + G+ ++ G+ ++D +L +EMN D V+W L+ +A
Sbjct: 608 SMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDA----CRA 663
Query: 358 NETIDLFEKMLSHGLKPD 375
+ +DL LK D
Sbjct: 664 RQNVDLATYAAKEILKLD 681
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/641 (36%), Positives = 377/641 (58%), Gaps = 36/641 (5%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
SWN +I+ +A G +A+++Y M + S TF+++L S+ +D GR+IH
Sbjct: 191 SWNAMIAAYAQSGHFEEAIRLYEDMDVEP----SVRTFTSVLSACSNLGLLDQGRKIHAL 246
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
I + RG E ++ + N ++T R ++++
Sbjct: 247 I---------------------------SSRG----TELDLSLQNALLTMYARCKCLDDA 275
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
++F+ + +D +SW+ MI + L EAI+ + +M+LEG+ + +TF SVL AC +
Sbjct: 276 AKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASV 335
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
L G+ +H I+ N +K + G+ALVD+Y S+ A S+F + ++ WT ++
Sbjct: 336 GDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLI 395
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGS-VISSCANLASLEEGTQFHGRSLVTGL 306
GY + G ++++ M+ P + S VIS+CA+L + + Q H G+
Sbjct: 396 GGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGM 455
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
IS ++ +LV Y + GN+E + ++F++M+ RD ++WT L++GYAK G+ + L+++
Sbjct: 456 ISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKE 515
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M G +P E+T + VL ACS AGL E+G+ F + +Y + P HY+C+ID+LSRAG
Sbjct: 516 MELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAG 575
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
RL +A+ IN MP P+ + W++LL + RIH +V+ AA + +LDP +PASYVLLS+
Sbjct: 576 RLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSN 635
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
++A G ++ +R TM +GV+K G SWI+ ++H F+ D S P +I+AEL++
Sbjct: 636 VHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQR 695
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
L+ K+ + GYVP+ VLHDV EK +L HSEKLAIAFGL+ PG +R+ LR+
Sbjct: 696 LSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRI 755
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCH+A K+IS I +REI+VRD+ RFH F++G+CSCGD+W
Sbjct: 756 CHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 796
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 211/402 (52%), Gaps = 46/402 (11%)
Query: 55 RRCVDLG--RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYN 112
R+C DL RQIH I + VF+G+ +V Y K G + A+ FD + KN
Sbjct: 35 RQCQDLESVRQIHDRI-SGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKN----- 88
Query: 113 TMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM 172
SW +M+T QNG R A+DL++ M L+
Sbjct: 89 --------------------------DYSWGSMLTAYAQNGHYRAALDLYKRMDLQP--- 119
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESV 231
+ + +VL AC + ALEEGK IH+ I K +V + ++L+ MY KC S++ A+ +
Sbjct: 120 NPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRL 179
Query: 232 FRTMAW-KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS 290
F M+ ++V SW AM+ Y Q+G EEA++++ +M +EP T SV+S+C+NL
Sbjct: 180 FERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDMD---VEPSVRTFTSVLSACSNLGL 236
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
L++G + H G +++ NAL+T Y +C ++D+ ++F + RD VSW+A+++
Sbjct: 237 LDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAA 296
Query: 351 YAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH-YFEIMVKEYGIR 409
+A+ +E I+ + KM G++P+ T VL AC+ G + GR + +I+ Y I
Sbjct: 297 FAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKIT 356
Query: 410 PIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
++ T ++D+ + G L+EA+S +++ + + W L+
Sbjct: 357 LVNG--TALVDLYTSYGSLDEARSLFDQIENRDEGL-WTVLI 395
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 132/486 (27%), Positives = 238/486 (48%), Gaps = 46/486 (9%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
SW +++ +A +G A+ +Y M D N + ++T+L +S ++ G+ IH
Sbjct: 91 SWGSMLTAYAQNGHYRAALDLYKRM--DLQPN--PVVYTTVLGACASIEALEEGKAIHSR 146
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
I GL D +++ N+++T + G +E++
Sbjct: 147 I------------------SGTKGLKLD------------VILENSLLTMYAKCGSLEDA 176
Query: 128 RRLFRGMKDKDSIS-WTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+RLF M + S+S W MI Q+G EAI L+ +M +E TF SVL+AC
Sbjct: 177 KRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVEPSVR---TFTSVLSACSN 233
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L L++G++IHA I + ++ + +AL+ MY +CK + A +F+ + ++VVSW+AM
Sbjct: 234 LGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAM 293
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ + + +EA++ + MQ G+ P+ +T SV+ +CA++ L G H + L G
Sbjct: 294 IAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGY 353
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ ALV Y G+++++ LF+++ RDE WT L+ GY+K G ++L+ +
Sbjct: 354 KITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYRE 413
Query: 367 MLSHGLKP-DEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
M + P ++ V+SAC+ G R + + G+ T ++++ SR
Sbjct: 414 MKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEAD-GMISDFVLATSLVNMYSRW 472
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN--VEIGKWAAESLLELDPYNPASYVL 483
G LE A+ +KM D + W TL++ HG + +G + +EL+ P+
Sbjct: 473 GNLESARQVFDKMS-SRDTLAWTTLIAGYAKHGEHGLALGLYKE---MELEGAEPSELTF 528
Query: 484 LSSIYA 489
+ +YA
Sbjct: 529 MVVLYA 534
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 156/304 (51%), Gaps = 16/304 (5%)
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
LE +QIH I NVF+G+ +V Y KC S+ A F +A KN SW +ML
Sbjct: 40 LESVRQIHDRI-SGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTA 98
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR-SLVTGLIS 308
Y QNG A+ ++ +R ++P+ +V+ +CA++ +LEEG H R S GL
Sbjct: 99 YAQNGHYRAALDLY---KRMDLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKL 155
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV-SWTALVSGYAKFGKANETIDLFEKM 367
+ + N+L+T Y KCG++ED+ RLF M+ R V SW A+++ YA+ G E I L+E M
Sbjct: 156 DVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDM 215
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
++P T VLSACS GL+++GR ++ G ++ + +R
Sbjct: 216 ---DVEPSVRTFTSVLSACSNLGLLDQGRK-IHALISSRGTELDLSLQNALLTMYARCKC 271
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE--SLLELDPYNPASYVLLS 485
L++A ++P D + W+ ++++ ++ A E S ++L+ P Y S
Sbjct: 272 LDDAAKIFQRLP-RRDVVSWSAMIAA---FAETDLFDEAIEFYSKMQLEGVRPNYYTFAS 327
Query: 486 SIYA 489
+ A
Sbjct: 328 VLLA 331
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 170/351 (48%), Gaps = 35/351 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VSW+ +I+ A ++A++ Y+ M +G+ + TF+++L+ +S +
Sbjct: 282 LPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGV-RPNYYTFASVLLACASVGDLRA 340
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +H IL G+ + G+ LVD+Y G + +A+ FD++
Sbjct: 341 GRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQI----------------- 383
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR-LEGLAMDQFTFGS 179
+++D WT +I G + G ++L+REM+ + + +
Sbjct: 384 --------------ENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSC 429
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
V++AC L A + +Q H+ I + + + ++LV+MY + +++ A VF M+ ++
Sbjct: 430 VISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRD 489
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FH 298
++WT ++ GY ++G A+ ++ M+ G EP + T V+ +C++ E+G Q F
Sbjct: 490 TLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFI 549
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALV 348
+ I + ++ + G + D+ L N M V ++V+W++L+
Sbjct: 550 SIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLL 600
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 244/647 (37%), Positives = 358/647 (55%), Gaps = 65/647 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + V +N++I + ++ +DA+ V+ M G+ + T+ +L SS + +
Sbjct: 97 IPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGI-DPDHYTYPCVLKASSGSEDLWV 155
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G QIH +++ G VFVG+ L+ MY K G + +A R D+
Sbjct: 156 GMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQ------------------ 197
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
M +D +SW +++ G +NG +A+++ +EM L GL D T S+
Sbjct: 198 -------------MPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASL 244
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A + N DNV + + +F +A K++
Sbjct: 245 LPA-----------------VTNTCLDNV----------------SFVKEMFMKLANKSL 271
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW M+ Y N EAV IF M+ + ++PD ++ SV+ +C +L++L G + H
Sbjct: 272 VSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEY 331
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ L + + NAL+ Y KCG +E + +F++M RD VSWT+++S Y GK +
Sbjct: 332 VVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDA 391
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LF +M GL PD + + VLSACS AGL+++GR+YF++M +E I P +H+ CM+D
Sbjct: 392 VSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVD 451
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG+++EA FI +MP P+ W LLS+CR++ N+ IG AA+ L +L P
Sbjct: 452 LLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGY 511
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS+IYA G+W+ V+ +R M+ KG++K PG S + +RVH F A D S P S QI
Sbjct: 512 YVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQI 571
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y EL+ KM + GYVP+ S LHDVE +K L HSEKLAIAF +L PG PIR+
Sbjct: 572 YEELDVSVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRI 631
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCH A K ISKI REI +RD RFH F NG CSCGD+W
Sbjct: 632 TKNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 678
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 139/295 (47%), Gaps = 21/295 (7%)
Query: 194 KQIHAFI-IRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
K++H+ I I +D N +G L+ Y C +F + KNVV + M+ Y
Sbjct: 55 KKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVN 114
Query: 253 NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITV 312
N +A+ +F NM +GI+PD +T V+ + + L G Q H + GL + V
Sbjct: 115 NHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFV 174
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGL 372
N L++ YGKCG + ++ R+ ++M RD VSW +LV+G A+ G+ ++ +++ ++M GL
Sbjct: 175 GNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGL 234
Query: 373 KPDEVTLIGVLSACSRAGL--VEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEE 430
KPD T+ +L A + L V + F + + + + MI + E
Sbjct: 235 KPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVS-----WNVMIAVYMNNSMPAE 289
Query: 431 AKSFINKM---PFPPDAIGWATLLSSC----------RIHGNVEIGKWAAESLLE 472
A +M PDAI A++L +C RIH V + LLE
Sbjct: 290 AVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLE 344
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 255/681 (37%), Positives = 370/681 (54%), Gaps = 66/681 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + +WN LI AS + V+ ML + + TF ++ ++ +
Sbjct: 90 IPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLA 149
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ IHG ++K FGS +F+ + L+ Y+ LG + A F ++ EK+IV
Sbjct: 150 GQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIV----------- 198
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SW +MI+G +Q G EA+ LF+ M++E ++ T V
Sbjct: 199 --------------------SWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGV 238
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+AC + LE G+ +I RN N+ + +A++DMY KC S++ A +F M K++
Sbjct: 239 LSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDI 298
Query: 241 VSWTAMLVGYG-------------------------------QNGCSEEAVKIFCNMQRN 269
VSWT M+ GY QNG +EA+ IF +Q N
Sbjct: 299 VSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLN 358
Query: 270 -GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIED 328
+P++ TL S +++CA L +++ G H G+ ++ +L+ Y KCG++E
Sbjct: 359 KNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEK 418
Query: 329 SHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
+ +F + RD W+A+++G A G IDLF KM +KP+ VT +L ACS
Sbjct: 419 ALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSH 478
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
+GLV++GR +F M YG+ P HY CM+DIL RAG LEEA I KMP P A W
Sbjct: 479 SGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWG 538
Query: 449 TLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
LL +CRI+GNVE+ + A LLE D N +YVLLS+IYA GKWD VS+LR+ M+ G
Sbjct: 539 ALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSG 598
Query: 509 VRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVE 568
+ K+PGCS I+ +H F D S P S +IY++L+++ ++ GYV D S +L VE
Sbjct: 599 LEKEPGCSSIEVNGIIHEFLVGDNSHPLSTEIYSKLDEIVARIKSTGYVSDESHLLQFVE 658
Query: 569 LSEKIK--MLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREIL 626
E +K LN HSEKLAIA+GL+ + P PIR+VKNLRVC DCH+ K ISK+ R+IL
Sbjct: 659 -EEYMKEHALNLHSEKLAIAYGLIRMEPSQPIRIVKNLRVCGDCHSVAKLISKLYNRDIL 717
Query: 627 VRDAVRFHLFKNGECSCGDFW 647
+RD RFH F G CSC D+W
Sbjct: 718 LRDRYRFHHFSGGNCSCMDYW 738
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 202/437 (46%), Gaps = 76/437 (17%)
Query: 62 RQIHGHILKFGF------GSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
+Q+H H+L+ G + +F L + L Y A + FD++P N+ +NT+I
Sbjct: 47 KQLHAHMLRTGLFFDPPSATKLFTACALS---SPSSLDY-ACKVFDQIPRPNLYTWNTLI 102
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM-DQ 174
R F S I GL+ +F +M E +
Sbjct: 103 -------------RAF--------ASSPKPIQGLL----------VFIQMLHESQRFPNS 131
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
+TF V+ A + +L G+ IH +++ ++F+ ++L+ Y + A VF
Sbjct: 132 YTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSK 191
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
+ K++VSW +M+ G+ Q G EEA+++F M+ P+ T+ V+S+CA LE G
Sbjct: 192 IVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFG 251
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
G+ + +SNA++ Y KCG++ED+ RLF++M +D VSWT ++ GYAK
Sbjct: 252 RWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKV 311
Query: 355 -------------------------------GKANETIDLFEKM-LSHGLKPDEVTLIGV 382
GK E + +F ++ L+ KP+EVTL
Sbjct: 312 GDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLAST 371
Query: 383 LSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPP 442
L+AC++ G ++ G + + +K+ GI+ T +ID+ S+ G LE+A +
Sbjct: 372 LAACAQLGAMDLG-GWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVE-RR 429
Query: 443 DAIGWATLLSSCRIHGN 459
D W+ +++ +HG+
Sbjct: 430 DVFVWSAMIAGLAMHGH 446
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/604 (37%), Positives = 361/604 (59%), Gaps = 36/604 (5%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
T+S ++ S R V G I H+ G +F+ + L++MY K L+ DA
Sbjct: 63 TYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDA------- 115
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
+LF M ++ ISWTTMI+ + + ++A++L
Sbjct: 116 ------------------------HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLV 151
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
M + + + +T+ SVL +C G+ + + +H II+ + +VFV SAL+D++ K
Sbjct: 152 LMLRDNVRPNVYTYSSVLRSCNGM---SDVRMLHCGIIKEGLESDVFVRSALIDVFAKLG 208
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
+ A SVF M + + W +++ G+ QN S+ A+++F M+R G + TL SV+
Sbjct: 209 EPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLR 268
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+C LA LE G Q H + + ++NALV Y KCG++ED+ R+FN+M RD ++
Sbjct: 269 ACTGLALLELGMQAHVH--IVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVIT 326
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
W+ ++SG A+ G + E + LFE+M S G KP+ +T++GVL ACS AGL+E G +YF M
Sbjct: 327 WSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMK 386
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
K YGI P+ +HY CMID+L +AG+L++A +N+M PDA+ W TLL +CR+ N+ +
Sbjct: 387 KLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLA 446
Query: 464 KWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSR 523
++AA+ ++ LDP + +Y LLS+IYA+ KWD V ++R MR++G++K+PGCSWI+ +
Sbjct: 447 EYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQ 506
Query: 524 VHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKL 583
+H F D S P ++ +L +L ++ GYVP+ + VL D+E + L HHSEKL
Sbjct: 507 IHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKL 566
Query: 584 AIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSC 643
A+AFGL+ +P IR+ KNLR+C DCH K SK+ R I++RD +R+H F++G+CSC
Sbjct: 567 ALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSC 626
Query: 644 GDFW 647
GD+W
Sbjct: 627 GDYW 630
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 181/354 (51%), Gaps = 43/354 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +SW +IS ++ A+++ LML+D + + T+S++L R C +
Sbjct: 122 MPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNV-RPNVYTYSSVL-----RSCNGM 175
Query: 61 G--RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
R +H I+K G S VFV S L+D++AKLG DA FDE+ + +++N+
Sbjct: 176 SDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNS----- 230
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+I G QN A++LF+ M+ G +Q T
Sbjct: 231 --------------------------IIGGFAQNSRSDVALELFKRMKRAGFIAEQATLT 264
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
SVL AC GL LE G Q H I++ D ++ + +ALVDMYCKC S++ A VF M +
Sbjct: 265 SVLRACTGLALLELGMQAHVHIVKYDQ--DLILNNALVDMYCKCGSLEDALRVFNQMKER 322
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQF 297
+V++W+ M+ G QNG S+EA+K+F M+ +G +P+ T+ V+ +C++ LE+G F
Sbjct: 323 DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYF 382
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
+ G+ ++ GK G ++D+ +L NEM D V+W L+
Sbjct: 383 RSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 156/302 (51%), Gaps = 8/302 (2%)
Query: 151 QNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVF 210
Q L R A+ ++ GL D T+ ++ C A+ EG I + N H+ +F
Sbjct: 39 QRDLPR-AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMF 97
Query: 211 VGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
+ + L++MY K + A +F M +NV+SWT M+ Y + ++A+++ M R+
Sbjct: 98 LVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN 157
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
+ P+ +T SV+ SC ++ + H + GL S + V +AL+ + K G ED+
Sbjct: 158 VRPNVYTYSSVLRSCNGMSDVR---MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDAL 214
Query: 331 RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
+F+EM D + W +++ G+A+ +++ ++LF++M G ++ TL VL AC+
Sbjct: 215 SVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLA 274
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATL 450
L+E G +VK Y I ++ ++D+ + G LE+A N+M D I W+T+
Sbjct: 275 LLELGMQAHVHIVK-YDQDLILNN--ALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTM 330
Query: 451 LS 452
+S
Sbjct: 331 IS 332
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 247/648 (38%), Positives = 363/648 (56%), Gaps = 34/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V WN +I+G + +D+++++ M+ DG+ + T + +L ++ + + +
Sbjct: 169 MPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGV-RVDSSTVTAVLPAAAELQELKV 227
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G I LK GFG +V + L+ +Y+K G + A+ F + +++ YN MI+G
Sbjct: 228 GMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTA 287
Query: 121 RGLVEESRRLFRGMK-DKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
G E S +LFR + + +S +T++ GL FG
Sbjct: 288 NGGTECSVKLFRELLFSGERVSSSTIV----------------------GLIPLHSPFGH 325
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+ AC IH F +++ N V +A +Y K I A +F K
Sbjct: 326 LHLAC----------SIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKT 375
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VV+W AM+ GY QNG +E A+ +F M + P+ T+ +++S+CA L SL G H
Sbjct: 376 VVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHH 435
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
L I VS ALV Y KCGNI ++ +LF+ M+ ++ V+W ++ GY G +E
Sbjct: 436 LIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHE 495
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ L+ +ML G P VT + VL ACS AGLV +G F MV +Y I P+ +HY CM+
Sbjct: 496 ALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMV 555
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
DIL R+G+LE+A FI KMP P W TLL +C IH + +I + A+E L ELDP +
Sbjct: 556 DILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVG 615
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
YVLLS+IY+ + + + +R+ ++++ + K PGC+ I+ H+F + D S ++
Sbjct: 616 YYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATD 675
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IYA+LEKL KM + GY + LHDVE EK +N HSEKLAIAFGL+ PG IR
Sbjct: 676 IYAKLEKLTGKMREMGYQAETVPALHDVEEEEKELAVNVHSEKLAIAFGLITTEPGNEIR 735
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
++KNLRVC DCH ATK+ISKIT+R I+VRDA RFH FK+G CSCGD+W
Sbjct: 736 IIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 783
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/489 (26%), Positives = 235/489 (48%), Gaps = 37/489 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D +N+L+ G + + S + ++ +Y + ++ + T++ + S+ + + L
Sbjct: 70 VPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLML 129
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+H H + G+GS VFVGS LVD+Y K + A++ FD
Sbjct: 130 ---LHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFD------------------- 167
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GM ++D++ W TMI GL++N ++I LFREM +G+ +D T +V
Sbjct: 168 ------------GMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAV 215
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A L L+ G I ++ +V + L+ +Y KC + A +FR + ++
Sbjct: 216 LPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDL 275
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+++ AM+ G+ NG +E +VK+F + +G T+ +I + L HG
Sbjct: 276 IAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGF 335
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ +G+I TVS A Y K I+ + LF+E + V+W A++SGY + G
Sbjct: 336 CVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETA 395
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
I LF++M+ P+ VT+ +LSAC++ G + G+ + ++K + P T ++D
Sbjct: 396 ISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGK-WVHHLIKSENLEPNIYVSTALVD 454
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+ ++ G + EA + M + + W T++ +HG +L L YNP++
Sbjct: 455 MYAKCGNISEAWQLFDSMS-EKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLG-YNPSA 512
Query: 481 YVLLSSIYA 489
LS +YA
Sbjct: 513 VTFLSVLYA 521
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 189/422 (44%), Gaps = 50/422 (11%)
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQFTFGSVLTACG 185
+R LF + D + ++ G N +I L+ +R L+ D FT+ + AC
Sbjct: 63 ARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACS 122
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
L +HA I + + NVFVGSALVD+YCK + YA VF M ++ V W
Sbjct: 123 NDKHL---MLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNT 179
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
M+ G +N C ++++++F M +G+ D T+ +V+ + A L L+ G +L G
Sbjct: 180 MINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIG 239
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
V L++ Y KCG++ + LF +N D +++ A++SG+ G ++ LF
Sbjct: 240 FGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFR 299
Query: 366 KMLSHGLKPDEVTLIGVLS----------ACSRAGL------------------------ 391
++L G + T++G++ ACS G
Sbjct: 300 ELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLN 359
Query: 392 -VEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM---PFPPDAIGW 447
++ RH F+ ++ + + MI ++ G E A S +M F P+A+
Sbjct: 360 EIDLARHLFDESPEKTVVA-----WNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTI 414
Query: 448 ATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYV--LLSSIYASKGKWDHVSQLRRTMR 505
T+LS+C G++ GKW L++ + P YV L +YA G QL +M
Sbjct: 415 TTILSACAQLGSLSFGKW-VHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMS 473
Query: 506 EK 507
EK
Sbjct: 474 EK 475
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/641 (36%), Positives = 377/641 (58%), Gaps = 36/641 (5%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
SWN +I+ +A G +A+++Y M + S TF+++L S+ +D GR+IH
Sbjct: 190 SWNAMIAAYAQSGHFEEAIRLYEDMDVEP----SVRTFTSVLSACSNLGLLDQGRKIHAL 245
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
I + RG E ++ + N ++T R ++++
Sbjct: 246 I---------------------------SSRG----TELDLSLQNALLTMYARCKCLDDA 274
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
++F+ + +D +SW+ MI + L EAI+ + +M+LEG+ + +TF SVL AC +
Sbjct: 275 AKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASV 334
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
L G+ +H I+ N +K + G+ALVD+Y S+ A S+F + ++ WT ++
Sbjct: 335 GDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLI 394
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGS-VISSCANLASLEEGTQFHGRSLVTGL 306
GY + G ++++ M+ P + S VIS+CA+L + + Q H G+
Sbjct: 395 GGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGM 454
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
IS ++ +LV Y + GN+E + ++F++M+ RD ++WT L++GYAK G+ + L+++
Sbjct: 455 ISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKE 514
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M G +P E+T + VL ACS AGL E+G+ F + +Y + P HY+C+ID+LSRAG
Sbjct: 515 MELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAG 574
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
RL +A+ IN MP P+ + W++LL + RIH +V+ AA + +LDP +PASYVLLS+
Sbjct: 575 RLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSN 634
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
++A G ++ +R TM +GV+K G SWI+ ++H F+ D S P +I+AEL++
Sbjct: 635 VHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQR 694
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
L+ K+ + GYVP+ VLHDV EK +L HSEKLAIAFGL+ PG +R+ LR+
Sbjct: 695 LSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRI 754
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCH+A K+IS I +REI+VRD+ RFH F++G+CSCGD+W
Sbjct: 755 CHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 795
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/401 (30%), Positives = 211/401 (52%), Gaps = 45/401 (11%)
Query: 55 RRCVDLG--RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYN 112
R+C DL RQIH I + VF+G+ +V Y K G + A+ FD + KN
Sbjct: 35 RQCQDLESVRQIHDRI-SGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKN----- 88
Query: 113 TMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM 172
SW +M+T QNG R A+DL++ M L+
Sbjct: 89 --------------------------DYSWGSMLTAYAQNGHYRAALDLYKRMDLQP--- 119
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESV 231
+ + +VL AC + ALEEGK IH+ I K +V + ++L+ MY KC S++ A+ +
Sbjct: 120 NPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRL 179
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASL 291
F M+ ++V SW AM+ Y Q+G EEA++++ +M +EP T SV+S+C+NL L
Sbjct: 180 FERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDMD---VEPSVRTFTSVLSACSNLGLL 236
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
++G + H G +++ NAL+T Y +C ++D+ ++F + RD VSW+A+++ +
Sbjct: 237 DQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAF 296
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH-YFEIMVKEYGIRP 410
A+ +E I+ + KM G++P+ T VL AC+ G + GR + +I+ Y I
Sbjct: 297 AETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITL 356
Query: 411 IHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
++ T ++D+ + G L+EA+S +++ + + W L+
Sbjct: 357 VNG--TALVDLYTSYGSLDEARSLFDQIENRDEGL-WTVLI 394
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 131/485 (27%), Positives = 237/485 (48%), Gaps = 45/485 (9%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
SW +++ +A +G A+ +Y M D N + ++T+L +S + ++ G+ IH
Sbjct: 91 SWGSMLTAYAQNGHYRAALDLYKRM--DLQPN--PVVYTTVLGACASIKALEEGKAIHSR 146
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
I GL D +++ N+++T + G +E++
Sbjct: 147 I------------------SGTKGLKLD------------VILENSLLTMYAKCGSLEDA 176
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
+RLF M + SW MI Q+G EAI L+ +M +E TF SVL+AC L
Sbjct: 177 KRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVEPSVR---TFTSVLSACSNL 233
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
L++G++IHA I + ++ + +AL+ MY +CK + A +F+ + ++VVSW+AM+
Sbjct: 234 GLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMI 293
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
+ + +EA++ + MQ G+ P+ +T SV+ +CA++ L G H + L G
Sbjct: 294 AAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYK 353
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
+ ALV Y G+++++ LF+++ RDE WT L+ GY+K G ++L+ +M
Sbjct: 354 ITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREM 413
Query: 368 LSHGLKP-DEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
+ P ++ V+SAC+ G R + + G+ T ++++ SR G
Sbjct: 414 KNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEAD-GMISDFVLATSLVNMYSRWG 472
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN--VEIGKWAAESLLELDPYNPASYVLL 484
LE A+ +KM D + W TL++ HG + +G + +EL+ P+ +
Sbjct: 473 NLESARQVFDKMS-SRDTLAWTTLIAGYAKHGEHGLALGLYKE---MELEGAEPSELTFM 528
Query: 485 SSIYA 489
+YA
Sbjct: 529 VVLYA 533
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 156/303 (51%), Gaps = 15/303 (4%)
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
LE +QIH I NVF+G+ +V Y KC S+ A + F +A KN SW +ML
Sbjct: 40 LESVRQIHDRI-SGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTA 98
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR-SLVTGLIS 308
Y QNG A+ ++ +R ++P+ +V+ +CA++ +LEEG H R S GL
Sbjct: 99 YAQNGHYRAALDLY---KRMDLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKL 155
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
+ + N+L+T Y KCG++ED+ RLF M+ R SW A+++ YA+ G E I L+E M
Sbjct: 156 DVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDM- 214
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
++P T VLSACS GL+++GR ++ G ++ + +R L
Sbjct: 215 --DVEPSVRTFTSVLSACSNLGLLDQGRK-IHALISSRGTELDLSLQNALLTMYARCKCL 271
Query: 429 EEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE--SLLELDPYNPASYVLLSS 486
++A ++P D + W+ ++++ ++ A E S ++L+ P Y S
Sbjct: 272 DDAAKIFQRLP-RRDVVSWSAMIAA---FAETDLFDEAIEFYSKMQLEGVRPNYYTFASV 327
Query: 487 IYA 489
+ A
Sbjct: 328 LLA 330
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 170/351 (48%), Gaps = 35/351 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VSW+ +I+ A ++A++ Y+ M +G+ + TF+++L+ +S +
Sbjct: 281 LPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGV-RPNYYTFASVLLACASVGDLRA 339
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +H IL G+ + G+ LVD+Y G + +A+ FD++
Sbjct: 340 GRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQI----------------- 382
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR-LEGLAMDQFTFGS 179
+++D WT +I G + G ++L+REM+ + + +
Sbjct: 383 --------------ENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSC 428
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
V++AC L A + +Q H+ I + + + ++LV+MY + +++ A VF M+ ++
Sbjct: 429 VISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRD 488
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FH 298
++WT ++ GY ++G A+ ++ M+ G EP + T V+ +C++ E+G Q F
Sbjct: 489 TLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFI 548
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALV 348
+ I + ++ + G + D+ L N M V ++V+W++L+
Sbjct: 549 SIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLL 599
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/647 (36%), Positives = 359/647 (55%), Gaps = 34/647 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D + WN +ISG+ + ++++V+ ++ + L T +L + + + L
Sbjct: 180 MPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRL 239
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G QIH K G S+ +V + + +Y+K G I K G
Sbjct: 240 GMQIHSLATKTGCYSHDYVLTGFISLYSKCGKI---KMG--------------------- 275
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
LFR + D +++ MI G NG ++ LF+E+ L G + T S+
Sbjct: 276 -------SALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSL 328
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ G L+ + IH + ++++ + V +AL +Y K I+ A +F K++
Sbjct: 329 VPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSL 385
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
SW AM+ GY QNG +E+A+ +F MQ++ P+ T+ ++S+CA L +L G H
Sbjct: 386 PSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDL 445
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
T S I VS AL+ Y KCG+I ++ RLF+ M ++EV+W ++SGY G+ E
Sbjct: 446 VRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEA 505
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+++F +ML+ G+ P VT + VL ACS AGLV++G F M+ YG P HY CM+D
Sbjct: 506 LNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVD 565
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
IL RAG L+ A FI M P + W TLL +CRIH + + + +E L ELDP N
Sbjct: 566 ILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGY 625
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
+VLLS+I+++ + + +R+T +++ + K PG + I+ H+F++ D S P +I
Sbjct: 626 HVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEI 685
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y +LEKL KM + GY P+ LHDVE E+ M+ HSE+LAIAFGL+ PG IR+
Sbjct: 686 YEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRI 745
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+KNLRVC DCH TK ISKIT+R I+VRDA RFH FK+G CSCGD+W
Sbjct: 746 IKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 128/483 (26%), Positives = 223/483 (46%), Gaps = 40/483 (8%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
+N+L+ G + + S + ++ V+ + K + T++ + +S R GR IHG
Sbjct: 86 FNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQA 145
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+ G S + +GS +V MY K + DA++ FD +PEK+ +++NTMI+G + + ES
Sbjct: 146 VVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESI 205
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
++FR DL E +D T +L A L
Sbjct: 206 QVFR---------------------------DLINE---SCTRLDTTTLLDILPAVAELQ 235
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
L G QIH+ + + +V + + +Y KC IK ++FR ++V++ AM+
Sbjct: 236 ELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIH 295
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
GY NG +E ++ +F + +G TL S++ +L + HG L + +S
Sbjct: 296 GYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLS 352
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
+VS AL T Y K IE + +LF+E + SW A++SGY + G + I LF +M
Sbjct: 353 HASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQ 412
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
P+ VT+ +LSAC++ G + G+ + +V+ T +I + ++ G +
Sbjct: 413 KSEFSPNPVTITCILSACAQLGALSLGK-WVHDLVRSTDFESSIYVSTALIGMYAKCGSI 471
Query: 429 EEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL--DPYNPASYVLLSS 486
EA+ + M + + W T++S +HG G+ A E+ P L
Sbjct: 472 AEARRLFDLMT-KKNEVTWNTMISGYGLHGQ---GQEALNIFYEMLNSGITPTPVTFLCV 527
Query: 487 IYA 489
+YA
Sbjct: 528 LYA 530
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 128/273 (46%), Gaps = 10/273 (3%)
Query: 195 QIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNG 254
Q HA II + ++++ + + L +I YA +F ++ +V + ++ G+ N
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 255 CSEEAVKIFCNMQRN-GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVS 313
++ +F +++++ ++P+ T IS+ + G HG+++V G S + +
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 314 NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG-L 372
+ +V Y K +ED+ ++F+ M +D + W ++SGY K E+I +F +++
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 373 KPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE--YGIRPIHDH-YTCMIDILSRAGRLE 429
+ D TL+ +L A + + G + K Y HD+ T I + S+ G+++
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYS----HDYVLTGFISLYSKCGKIK 273
Query: 430 EAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
+ + PD + + ++ +G E+
Sbjct: 274 MGSALFREFR-KPDIVAYNAMIHGYTSNGETEL 305
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/567 (40%), Positives = 346/567 (61%), Gaps = 9/567 (1%)
Query: 83 LVDMYAK-LGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSIS 141
L+ YA+ LG + DA+ FD +P + V YNT+++ G + +RRLF M +D +S
Sbjct: 54 LLAGYARALGRLADARHLFDRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVRDVVS 113
Query: 142 WTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFII 201
W TM++GL ++G EA +F M + + ++ ++++ G + +
Sbjct: 114 WNTMVSGLSKSGAVEEAKAVFLAMPVR----NSVSWNAMVS---GFACSRDMSAAEEWFR 166
Query: 202 RNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVK 261
K + + +A+V Y ++ A F M +N+VSW A++ GY +N +++A++
Sbjct: 167 NAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALR 226
Query: 262 IFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFY 320
+F M R ++P+ TL SV+ C+NL++L G Q H + L +TV +LV+ Y
Sbjct: 227 LFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMY 286
Query: 321 GKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLI 380
KCG++ + +LF EM+ RD V+W A++SGYA+ G E I+LFE+M G++P+ +T +
Sbjct: 287 CKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFV 346
Query: 381 GVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF 440
VL+AC GL + G FE M + YGI P DHY+CM+D+L RAG+LE A I MPF
Sbjct: 347 AVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPF 406
Query: 441 PPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQL 500
P + TLL++CR++ N+E + AA L+E DP + +YV L++IYA +WD VS++
Sbjct: 407 EPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWDDVSRV 466
Query: 501 RRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDM 560
RR M++ V K PG SWI+ K +H F ++D P I+ +L +L +M GYVPD+
Sbjct: 467 RRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPDL 526
Query: 561 SSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKI 620
VLHDV+ + K++ML HSEKLAI+FGL+ PG+ +R+ KNLRVC DCHNA K ISKI
Sbjct: 527 DFVLHDVDETLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLRVCGDCHNAAKVISKI 586
Query: 621 TQREILVRDAVRFHLFKNGECSCGDFW 647
REI++RD RFH F+ G CSCGD+W
Sbjct: 587 EDREIILRDTTRFHHFRGGHCSCGDYW 613
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 172/370 (46%), Gaps = 44/370 (11%)
Query: 2 PFHDGVSWNLLISGHA-SHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
P ++N L++G+A + G + DA ++ D + ++++T+L + D
Sbjct: 44 PRKTTATYNCLLAGYARALGRLADARHLF-----DRIPTPDAVSYNTLLSCHFASGDADG 98
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
R++ + S+ + +V +K G + +AK F +P +N V +N M++G
Sbjct: 99 ARRLFASMPVRDVVSW----NTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFAC 154
Query: 121 RGLVEESRRLFRGMKDK-DSISWTTMITGLM----------------------------- 150
+ + FR +K D++ WT M++G M
Sbjct: 155 SRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAG 214
Query: 151 --QNGLEREAIDLFREM-RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKD 207
+N +A+ LFR M R + + T SVL C L AL GKQIH + ++
Sbjct: 215 YVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSR 274
Query: 208 NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQ 267
N+ VG++LV MYCKC + A +F M ++VV+W AM+ GY Q+G +EA+ +F M+
Sbjct: 275 NLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMK 334
Query: 268 RNGIEPDDFTLGSVISSCANLASLEEGTQ-FHGRSLVTGLISFITVSNALVTFYGKCGNI 326
G+EP+ T +V+++C + + G + F G + G+ + + +V + G +
Sbjct: 335 DEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKL 394
Query: 327 EDSHRLFNEM 336
E + L M
Sbjct: 395 ERAVDLIRSM 404
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 115/245 (46%), Gaps = 44/245 (17%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSWN +++G+ + +DA++++ M+++ + T S++L+ S+ +
Sbjct: 200 MPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGF 259
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIH +K + VG+ LV MY K G + A + F E+ +++V +N MI+G +
Sbjct: 260 GKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQ 319
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G +E+ LF MKD EG+ + TF +V
Sbjct: 320 HGDGKEAINLFERMKD-------------------------------EGVEPNWITFVAV 348
Query: 181 LTAC-------GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
LTAC G+ E ++++ R DH S +VD+ C+ ++ A + R
Sbjct: 349 LTACIHTGLCDFGIRCFEGMQELYGIEPRVDHY------SCMVDLLCRAGKLERAVDLIR 402
Query: 234 TMAWK 238
+M ++
Sbjct: 403 SMPFE 407
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 242/622 (38%), Positives = 342/622 (54%), Gaps = 34/622 (5%)
Query: 28 VYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL--GRQIHGHILKFGFGSYVFVGSPLVD 85
++ L L L N S +TF L S+SR L G Q+H LK + V + L+
Sbjct: 103 LHALRLHCLLPNPSHLTFPIAL-KSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLT 161
Query: 86 MYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTM 145
+YA+ GL++ A+R FDE+P + V SWT +
Sbjct: 162 LYARCGLLHRAQRVFDEMPHPSTV-------------------------------SWTAL 190
Query: 146 ITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH 205
IT M G REA+ + R G+ D FT VLTAC + L G+ + +
Sbjct: 191 ITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGI 250
Query: 206 KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCN 265
+VFV +A VD+Y KC + A VF M K+ V+W AM+ GY NG EA+ +F
Sbjct: 251 AQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLA 310
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
MQ G+ PD + + +S+C L +L+ G Q + + AL+ Y KCG+
Sbjct: 311 MQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGS 370
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
++ +F +M +D + W A++ G G L +M G+K ++ T IG+L +
Sbjct: 371 TAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCS 430
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
C+ GL++ GR YF M K Y I P +HY C++D+LSRAG L+EA I+ MP P +A+
Sbjct: 431 CTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAV 490
Query: 446 GWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
LL C+IH N E+ + L+ L+P+N +YV+LS+IY+++G+W+ ++LR M+
Sbjct: 491 ILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMK 550
Query: 506 EKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLH 565
EKGV K P CSW++++ +VH F D S P SDQIY +L++L +M GY P V+
Sbjct: 551 EKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMF 610
Query: 566 DVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREI 625
DVE EK L HHSEKLAIAF LL PG IRV KNLRVCSDCH A K IS+IT REI
Sbjct: 611 DVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCHTAIKLISRITHREI 670
Query: 626 LVRDAVRFHLFKNGECSCGDFW 647
+VRD RFH F++G CSC D+W
Sbjct: 671 IVRDNNRFHCFRDGSCSCNDYW 692
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 162/339 (47%), Gaps = 37/339 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP VSW LI+ + G + +AV V +G+ S F+ + ++++ R DL
Sbjct: 179 MPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDS---FTAVRVLTACARVADL 235
Query: 61 --GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G + + G VFV + VD+Y K G + A+ FD++ +K+ V + M
Sbjct: 236 ATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAM---- 291
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+ G NG REA+DLF M+ EG+ D +
Sbjct: 292 ---------------------------VGGYASNGHPREALDLFLAMQAEGVRPDCYAVA 324
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
L+AC L AL+ G+Q + ++ DN +G+AL+DMY KC S A VF+ M K
Sbjct: 325 GALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKK 384
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-F 297
+++ W AM++G G G + A + M+++G++ +D T ++ SC + +++G + F
Sbjct: 385 DIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYF 444
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
H + + + I +V + G ++++H+L ++M
Sbjct: 445 HNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDM 483
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 127/284 (44%), Gaps = 28/284 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRR--CVDLGR 62
D V+W ++ G+AS+G +A+ ++ M +G+ ++ +S+ R +DLGR
Sbjct: 284 DAVAWGAMVGGYASNGHPREALDLFLAMQAEGV---RPDCYAVAGALSACTRLGALDLGR 340
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
Q + F +G+ L+DMYAK G +A F ++ +K+I+++N MI GL G
Sbjct: 341 QAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGL---G 397
Query: 123 LVEESRRLFR--GMKDKDSI-----SWTTMITGLMQNGLEREAIDLFREM-RLEGLAMDQ 174
+ + F G +K + ++ ++ GL ++ F M +L ++
Sbjct: 398 MTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRI 457
Query: 175 FTFGSV--LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
+G + L + GLL ++ H I N + AL+ ++ + AE V
Sbjct: 458 EHYGCIVDLLSRAGLL-----QEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVL 512
Query: 233 ----RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE 272
R W N ++ + Y G E+A K+ +M+ G+E
Sbjct: 513 TQLIRLEPW-NSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVE 555
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 245/640 (38%), Positives = 375/640 (58%), Gaps = 50/640 (7%)
Query: 10 NLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHIL 69
N +I+ G ++ A++V++ G+ + IT++++LI S D R + H L
Sbjct: 65 NKIIARCVRSGDIDGALRVFH-----GMRAKNTITWNSLLIGISK----DPSRMMEAHQL 115
Query: 70 KFGFGSY-VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
F + ++ Y + A+ FD +P K+ +NTMITG RRG +E++R
Sbjct: 116 FDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKAR 175
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
LF M +K+ +SW MI+G ++ G +A F+ + G
Sbjct: 176 ELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRG------------------- 216
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW-KNVVSWTAML 247
V +A++ Y K K ++ AE++F+ M KN+V+W AM+
Sbjct: 217 --------------------VVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMI 256
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
GY +N E+ +K+F M GI P+ L S + C+ L++L+ G Q H + L
Sbjct: 257 SGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLC 316
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
+ +T +L++ Y KCG + D+ +LF M +D V+W A++SGYA+ G A++ + LF +M
Sbjct: 317 NDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREM 376
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
+ + ++PD +T + VL AC+ AGLV G YFE MV++Y + P DHYTCM+D+L RAG+
Sbjct: 377 IDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGK 436
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSI 487
LEEA I MPF P A + TLL +CR+H NVE+ ++AAE LL+L+ N A YV L++I
Sbjct: 437 LEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANI 496
Query: 488 YASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKL 547
YASK +W+ V+++R+ M+E V K PG SWI+ +++VH F + D P D I+ +L++L
Sbjct: 497 YASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKEL 556
Query: 548 NRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVC 607
+KM GY P++ LH+VE +K K+L HSEKLA+AFG + +P G I+V KNLR+C
Sbjct: 557 EKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRIC 616
Query: 608 SDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
DCH A K+IS+I +REI+VRD RFH FK+G CSCGD+W
Sbjct: 617 GDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 173/373 (46%), Gaps = 45/373 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MPF D SWN +I+G+A G + A +++ M++ + ++++ M+ S C DL
Sbjct: 150 MPFKDAASWNTMITGYARRGEMEKARELFYSMMEK-----NEVSWNAMI--SGYIECGDL 202
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+ H F P + +V + MITG ++
Sbjct: 203 EKASH---------------------------------FFKVAPVRGVVAWTAMITGYMK 229
Query: 121 RGLVEESRRLFRGMK-DKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
VE + +F+ M +K+ ++W MI+G ++N + + LFR M EG+ + S
Sbjct: 230 AKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSS 289
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
L C L AL+ G+QIH + ++ ++V ++L+ MYCKC + A +F M K+
Sbjct: 290 ALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKD 349
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VV+W AM+ GY Q+G +++A+ +F M N I PD T +V+ +C N A L +
Sbjct: 350 VVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLAC-NHAGLVNIGMAYF 408
Query: 300 RSLVTGLISFITVSN--ALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
S+V + +V G+ G +E++ +L M R + + G + K
Sbjct: 409 ESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKN 468
Query: 358 NETIDL-FEKMLS 369
E + EK+L
Sbjct: 469 VELAEFAAEKLLQ 481
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 128/323 (39%), Gaps = 66/323 (20%)
Query: 199 FIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCS-E 257
++ + +D +F + ++ + I A VF M KN ++W ++L+G ++
Sbjct: 51 YLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMM 110
Query: 258 EAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR----------SLVTG-- 305
EA ++F + EPD F+ ++S + E+ F R +++TG
Sbjct: 111 EAHQLFDEIP----EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYA 166
Query: 306 --------------LISFITVS-NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
++ VS NA+++ Y +CG++E + F VR V+WTA+++G
Sbjct: 167 RRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITG 226
Query: 351 YAKFGKA--------------------------------NETIDLFEKMLSHGLKPDEVT 378
Y K K + + LF ML G++P+
Sbjct: 227 YMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSG 286
Query: 379 LIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
L L CS ++ GR +I+ K + T +I + + G L +A M
Sbjct: 287 LSSALLGCSELSALQLGRQIHQIVSKSTLCNDV-TALTSLISMYCKCGELGDAWKLFEVM 345
Query: 439 PFPPDAIGWATLLSSCRIHGNVE 461
D + W ++S HGN +
Sbjct: 346 K-KKDVVAWNAMISGYAQHGNAD 367
>gi|5280987|emb|CAB46001.1| hypothetical protein [Arabidopsis thaliana]
gi|7268109|emb|CAB78447.1| hypothetical protein [Arabidopsis thaliana]
Length = 686
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 241/631 (38%), Positives = 360/631 (57%), Gaps = 80/631 (12%)
Query: 51 MSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVM 110
S R + + +H HI+K G + + LV++Y K G A + FDE+P +
Sbjct: 80 FSRMNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHR---- 135
Query: 111 YNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG- 169
D I+W +++T L Q L + + +F +
Sbjct: 136 ---------------------------DHIAWASVLTALNQANLSGKTLSVFSSVGSSSG 168
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
L D F F +++ AC L +++ G+Q+H I +++ ++ V S+LVDMY KC + A+
Sbjct: 169 LRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAK 228
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVK---------------------------- 261
+VF ++ KN +SWTAM+ GY ++G EEA++
Sbjct: 229 AVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLE 288
Query: 262 ---IFCNMQRNGIEP-DDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALV 317
+F M+R ++ D L S++ +CANLA+ G Q HG NAL+
Sbjct: 289 AFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHG--------------NALI 334
Query: 318 TFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEV 377
Y KC ++ + +F+ M RD VSWT+L+ G A+ G+A + + L++ M+SHG+KP+EV
Sbjct: 335 DMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEV 394
Query: 378 TLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINK 437
T +G++ ACS G VEKGR F+ M K+YGIRP HYTC++D+L R+G L+EA++ I+
Sbjct: 395 TFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHT 454
Query: 438 MPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL-ELDPYNPASYVLLSSIYASKGKWDH 496
MPFPPD WA LLS+C+ G ++G A+ L+ +P++Y+LLS+IYAS W
Sbjct: 455 MPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGK 514
Query: 497 VSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKM-IKEG 555
VS+ RR + E VRKDPG S ++ + +F A + S P + I+ L+KL +M I+ G
Sbjct: 515 VSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNG 574
Query: 556 YVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATK 615
YVPD S +LHD++ EK K+L HSE+ A+A+GLL PG PIR+VKNLRVC DCH K
Sbjct: 575 YVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLK 634
Query: 616 YISKITQREILVRDAVRFHLFKNGECSCGDF 646
+IS+IT+REI+VRDA R+H FK G+CSC DF
Sbjct: 635 HISEITEREIIVRDATRYHHFKGGKCSCNDF 665
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 206/402 (51%), Gaps = 20/402 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D ++W +++ + V++ + FS ++ ++ +D
Sbjct: 132 MPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDH 191
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H H + + + V S LVDMYAK GL+ AK FD + KN + + M++G +
Sbjct: 192 GRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAK 251
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL-AMDQFTFGS 179
G EE+ LFR + K+ SWT +I+G +Q+G EA +F EMR E + +D S
Sbjct: 252 SGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSS 311
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
++ AC L A G+Q+H G+AL+DMY KC + A+ +F M ++
Sbjct: 312 IVGACANLAASIAGRQVH--------------GNALIDMYAKCSDVIAAKDIFSRMRHRD 357
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FH 298
VVSWT+++VG Q+G +E+A+ ++ +M +G++P++ T +I +C+++ +E+G + F
Sbjct: 358 VVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQ 417
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALVSGYAKFGKA 357
+ G+ + L+ G+ G ++++ L + M DE +W AL+S + G+
Sbjct: 418 SMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRG 477
Query: 358 NETIDLFEKMLSHGLKPDEVTLI---GVLSACSRAGLVEKGR 396
I + + ++S D T I + ++ S G V + R
Sbjct: 478 QMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEAR 519
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 104/237 (43%), Gaps = 12/237 (5%)
Query: 276 FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNE 335
F GS S +L H + G++ ++N LV YGKCG + ++F+E
Sbjct: 74 FDFGSYFSRMNR--TLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDE 131
Query: 336 MNVRDEVSWTALVSGYAKFGKANETI-DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEK 394
M RD ++W ++++ + + +T+ S GL+PD+ ++ AC+ G ++
Sbjct: 132 MPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDH 191
Query: 395 GRH-YFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
GR + +V EY + + ++D+ ++ G L AK+ + + + I W ++S
Sbjct: 192 GRQVHCHFIVSEYANDEVVK--SSLVDMYAKCGLLNSAKAVFDSIRV-KNTISWTAMVSG 248
Query: 454 CRIHGNVEIGKWAAESLLELDPY-NPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
G E A L + P N S+ L S + GK + MR + V
Sbjct: 249 YAKSGRKE----EALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERV 301
>gi|115486527|ref|NP_001068407.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|108864631|gb|ABG22570.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645629|dbj|BAF28770.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|215694601|dbj|BAG89792.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215701272|dbj|BAG92696.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 610
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 244/618 (39%), Positives = 346/618 (55%), Gaps = 62/618 (10%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
R +H ILK G + + LV YAK L+ DA FDE P ++I +Y++++T +
Sbjct: 23 RGMHARILKEGLAHHPPNPAALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHS 82
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
E + + R M D+ L D F SV
Sbjct: 83 ASPELALPILRCMLSADA------------------------------LHPDHFVISSVA 112
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+ L + G+Q+HA + + + + V S+LVDMYCKC S VF +M+ KN V
Sbjct: 113 SVFARLRSRRLGRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVFDSMSAKNSV 172
Query: 242 SWTAMLVGYGQNGCSEEA-------------------------------VKIFCNMQRNG 270
WTA++ GY NG SEEA V++F M+R+G
Sbjct: 173 VWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRRDG 232
Query: 271 IEPDD-FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
+ DD F L VI A+LA+ G Q HG ++ G +S + V NAL+ Y KC +I +
Sbjct: 233 VRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYSKCSDILSA 292
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
+F + RD +SWT +V G A+ G+A E + L+++M+ G KP+EVT +G++ ACS A
Sbjct: 293 REVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHA 352
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
GLV+KGR FE M EYGI P HYTC +D+LSR+G L EA+ + MP+ PD W
Sbjct: 353 GLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYEPDEATWGA 412
Query: 450 LLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
LLS+C + + E+ ++ LLEL P + ++Y+LLS++YA GKWD V+++R+ M +
Sbjct: 413 LLSACTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWDSVAKVRKCMIGLEI 472
Query: 510 RKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVEL 569
RK+PG SWI+ +F A + ++I LE++ +M K GYVPD SSV+HD+E
Sbjct: 473 RKEPGYSWIEAGREFRLFHAGEVPLDVREEIMVFLEEMVLEMRKRGYVPDTSSVMHDLEE 532
Query: 570 SEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRD 629
SEK L HSE+LA+AFGL+ PPG IRVVKNLRVC DCH K IS+IT R+I+VRD
Sbjct: 533 SEKEHHLFLHSERLAVAFGLIKSPPGSVIRVVKNLRVCVDCHTVMKLISEITHRKIVVRD 592
Query: 630 AVRFHLFKNGECSCGDFW 647
+ RFH F+ G+CSC +FW
Sbjct: 593 SSRFHHFEGGKCSCSEFW 610
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 196/386 (50%), Gaps = 5/386 (1%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P D ++ L++ + S A+ + ML + S++ + + R LG
Sbjct: 65 PRRDIYIYSSLLTAVSHSASPELALPILRCMLSADALHPDHFVISSVASVFARLRSRRLG 124
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
RQ+H H + + V S LVDMY K G D ++ FD + KN V++ +++G
Sbjct: 125 RQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVFDSMSAKNSVVWTALVSGYASN 184
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ-FTFGSV 180
G EE+ +LFR M ++ +WT +I+GL+ G A++LF EMR +G+ +D F V
Sbjct: 185 GRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRRDGVRIDDAFVLSIV 244
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ L A G+Q+H +R N+ VG+AL+DMY KC I A VF + +++V
Sbjct: 245 IGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYSKCSDILSAREVFEGITFRDV 304
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
+SWT M+VG Q+G +EEA+ ++ M G +P++ T +I +C++ +++G Q F
Sbjct: 305 ISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFES 364
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKAN 358
G+ + + + G++ ++ L M DE +W AL+S K+ A
Sbjct: 365 MKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYEPDEATWGALLSACTKYKDAE 424
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLS 384
I + +K+L L+P + + +LS
Sbjct: 425 MCIRISDKLLE--LRPKDSSTYILLS 448
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 8/200 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +W LISG + G AV+++ M +DG+ S ++ S+ L
Sbjct: 197 MPGRNLFAWTALISGLVNTGESVGAVELFVEMRRDGVRIDDAFVLSIVIGGSADLAAFVL 256
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+HG ++ GF S + VG+ L+DMY+K I A+ F+ + ++++ + TM+ G +
Sbjct: 257 GRQLHGSTMRLGFLSNMIVGNALIDMYSKCSDILSAREVFEGITFRDVISWTTMVVGEAQ 316
Query: 121 RGLVEESRRLFRGM----KDKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GLA--MD 173
G EE+ L+ M + +++ +I GL ++ LF M+ E G+ +
Sbjct: 317 HGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQ 376
Query: 174 QFT-FGSVLTACGGLLALEE 192
+T + +L+ G LL EE
Sbjct: 377 HYTCYLDLLSRSGHLLEAEE 396
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 245/647 (37%), Positives = 359/647 (55%), Gaps = 65/647 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + V +N++I + ++ +DA+ V+ M G+ + T+ +L SS + +
Sbjct: 1086 IPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGI-DPDHYTYPCVLKASSGSEDLWV 1144
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G QIH +++ G VFVG+ L+ MY K G + +A R DZ
Sbjct: 1145 GMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZ------------------ 1186
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
M +D +SW +++ G +NG +A+++ +EM L GL D T S+
Sbjct: 1187 -------------MPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASL 1233
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A + N DNV + + +F +A K++
Sbjct: 1234 LPA-----------------VTNTCLDNV----------------SFVKEMFMKLANKSL 1260
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW M+ Y N EAV IF M+ + ++PD ++ SV+ +C +L++L G + H
Sbjct: 1261 VSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEY 1320
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ L + + NAL+ Y KCG +E + +F++M RD VSWT+++S Y GK +
Sbjct: 1321 VVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDA 1380
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LF +M GL PD + + VLSACS AGL+++GR+YF++M +E I P +H+ CM+D
Sbjct: 1381 VSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVD 1440
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG+++EA FI +MP P+ W LLS+CR++ N+ IG AA+ L +L P
Sbjct: 1441 LLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGY 1500
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS+IYA G+W+ V+ +R M+ KG++K PG S + +RVH F A D S P S QI
Sbjct: 1501 YVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQI 1560
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y EL+ L KM + GYVP+ S LHDVE +K L HSEKLAIAF +L PG PIR+
Sbjct: 1561 YEELDVLVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRI 1620
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCH A K ISKI REI +RD RFH F NG CSCGD+W
Sbjct: 1621 TKNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 1667
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 131/267 (49%), Gaps = 11/267 (4%)
Query: 194 KQIHAFI-IRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
K++H+ I I +D N +G L+ Y C +F + KNVV + M+ Y
Sbjct: 1044 KKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVN 1103
Query: 253 NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITV 312
N +A+ +F NM +GI+PD +T V+ + + L G Q H + GL + V
Sbjct: 1104 NHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFV 1163
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGL 372
N L++ YGKCG + ++ R+ +ZM RD VSW +LV+G A+ G+ ++ +++ ++M GL
Sbjct: 1164 GNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGL 1223
Query: 373 KPDEVTLIGVLSACSRAGL--VEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEE 430
KPD T+ +L A + L V + F + + + + MI + E
Sbjct: 1224 KPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVS-----WNVMIAVYMNNSMPAE 1278
Query: 431 AKSFINKM---PFPPDAIGWATLLSSC 454
A +M PDAI A++L +C
Sbjct: 1279 AVDIFLQMEDHAVDPDAISIASVLPAC 1305
>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/600 (37%), Positives = 359/600 (59%), Gaps = 33/600 (5%)
Query: 49 LIMSSSR-RCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKN 107
L++SS+R R + G Q+HG+I+K G V + L++ Y+K L +D++R F++ P+
Sbjct: 21 LLLSSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQ-- 78
Query: 108 IVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL 167
K + +W+++I+ QN L +++ R+M
Sbjct: 79 -----------------------------KSATTWSSIISCFAQNELPWMSLEFLRKMMA 109
Query: 168 EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY 227
L D S +CG L + GK +H ++ + +VFVGS+LVDMY KC I Y
Sbjct: 110 GSLRPDDHVLPSATKSCGILSRCDIGKSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVY 169
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN 287
A +F M +NVV+W+ M+ GY Q G +EEA+ +F + +D++ +VIS CAN
Sbjct: 170 ARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSTVISVCAN 229
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
LE G Q G + + S V ++LV+ Y KCG++E ++++F+E+ +R+ W A+
Sbjct: 230 STLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEGAYQVFDEVPMRNLGIWNAM 289
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYG 407
+ A+ + I+LF++M G+KP+ +T + VL+ACS AGLV++G++YF++M KE
Sbjct: 290 LKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGKYYFDLM-KESR 348
Query: 408 IRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAA 467
I P HY ++D+L RAG+LEEA + MP P W LL+SC IH N E+ +AA
Sbjct: 349 IEPTDKHYASLVDMLGRAGKLEEALEIVTNMPIDPTESVWGALLTSCTIHKNTELAAFAA 408
Query: 468 ESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF 527
+ + EL P + ++ LS+ YA+ G+++ ++ R+ +R++G +K+ G SW++ +++VH F
Sbjct: 409 DKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTF 468
Query: 528 SADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAF 587
+A + S +IY +L +L +M K GYV D S VL +V+ EK + + +HSE+LAIAF
Sbjct: 469 AAGERRHERSKEIYEKLAELGEEMEKAGYVADTSYVLREVDGDEKNQTIRYHSERLAIAF 528
Query: 588 GLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
GL+ P PIRV+KNLRVC DCHNA K++S T+R I+VRD RFH F++G+CSC D+W
Sbjct: 529 GLITFPADRPIRVMKNLRVCGDCHNAIKFMSICTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 154/352 (43%), Gaps = 77/352 (21%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+W+ ++ G+A G +A+ ++ L + L ++ +FST++ + ++ ++L
Sbjct: 177 MPLRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLA-VNDYSFSTVISVCANSTLLEL 235
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQI G +K F S FVGS LV +Y+K G + A + FDE+P +N+ ++N
Sbjct: 236 GRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEGAYQVFDEVPMRNLGIWN-------- 287
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
M+ Q+ ++ I+LF+ M+L G+ + TF +V
Sbjct: 288 -----------------------AMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNV 324
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC ++EGK + + + ++LVDM
Sbjct: 325 LNACSHAGLVDEGKYYFDLMKESRIEPTDKHYASLVDM---------------------- 362
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC-----ANLASLEEGT 295
G+ G EEA++I NM I+P + G++++SC LA+
Sbjct: 363 ---------LGRAGKLEEALEIVTNMP---IDPTESVWGALLTSCTIHKNTELAAFAADK 410
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
F + +G+ I++SNA Y G ED+ + + R E T L
Sbjct: 411 VFELGPVSSGM--HISLSNA----YAADGRFEDAAKARKLLRDRGEKKETGL 456
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/644 (36%), Positives = 375/644 (58%), Gaps = 32/644 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D ++WN ++ + A++ Y ML+ R TF ++L + +G+ +
Sbjct: 42 DVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVL 101
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG ++K+ S +++ + L++MYA G + A
Sbjct: 102 HGQVVKYMLHSDLYIETTLLNMYAACGDLKSA---------------------------- 133
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
R LF M ++ + WT+MI+G M+N EA+ L+++M +G + D+ T ++++AC
Sbjct: 134 ---RFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSAC 190
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L L G ++H+ I D K +GSALV+MY KC +K A VF ++ K+V +W+
Sbjct: 191 AELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWS 250
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQR-NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
A++ GY +N S EA+++F + + + P++ T+ +VIS+CA L LE G H
Sbjct: 251 ALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITR 310
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
T ++++N+L+ + KCG+I+ + R+F+ M+ +D +SW ++V+G+A G E +
Sbjct: 311 TQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQ 370
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F M + L+PDE+T IGVL+ACS AGLV++G+ F + YG+R +HY CM+D+L
Sbjct: 371 FRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLC 430
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
RAG L EA+ FI MP PD W ++L +CR++ N+E+G+ AA LL+L+P N Y+L
Sbjct: 431 RAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYIL 490
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LS+IYA + W+ V ++R M EKG++K PGCS + + H F A D S P +I
Sbjct: 491 LSNIYAKRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIM 550
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
L ++ K+ GYV D S VL +++ ++K + ++ HSEKLA+ +GLL G I ++KN
Sbjct: 551 LRQVREKLKLAGYVADTSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKN 610
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LRVCSDCH K +SKI QR+I +RD RFH FK+G CSC D+W
Sbjct: 611 LRVCSDCHTLIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 186/335 (55%), Gaps = 12/335 (3%)
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM-DQFTFGSVLTACGGLL 188
+F ++ D ++W +M+ + + + R A+ + EM + D+FTF S+L C LL
Sbjct: 34 VFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLL 93
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
+ GK +H +++ ++++ + L++MY C +K A +F M +N V WT+M+
Sbjct: 94 EFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMIS 153
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
GY +N C EA+ ++ M+ +G PD+ T+ +++S+CA L L G + H +
Sbjct: 154 GYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKI 213
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
+ +ALV Y KCG+++ + ++F++++ +D +W+AL+ GY K ++ E + LF ++
Sbjct: 214 CAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVA 273
Query: 369 -SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT----CMIDILS 423
++P+EVT++ V+SAC++ G +E GR V +Y R H +ID+ S
Sbjct: 274 GGSNMRPNEVTILAVISACAQLGDLETGR-----WVHDYITRTQKGHSVSLNNSLIDMFS 328
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ G ++ AK + M + D I W ++++ +HG
Sbjct: 329 KCGDIDAAKRIFDSMSY-KDLISWNSMVNGFALHG 362
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 154/298 (51%), Gaps = 33/298 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + V W +ISG+ + N+A+ +Y M +DG +T +T++ + + + +
Sbjct: 140 MGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSP-DEVTMATLVSACAELKDLGV 198
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G ++H HI + +GS LV+MYAK G + A++ FD+L +K++ ++ +I G ++
Sbjct: 199 GMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVK 258
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR-LEGLAMDQFTFGS 179
N EA+ LFRE+ + ++ T +
Sbjct: 259 -------------------------------NNRSTEALQLFREVAGGSNMRPNEVTILA 287
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
V++AC L LE G+ +H +I R +V + ++L+DM+ KC I A+ +F +M++K+
Sbjct: 288 VISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKD 347
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
++SW +M+ G+ +G EA+ F MQ ++PD+ T V+++C++ ++EG +
Sbjct: 348 LISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKL 405
>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
Length = 652
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/649 (35%), Positives = 381/649 (58%), Gaps = 22/649 (3%)
Query: 4 HDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQ 63
D SW +++S +A G +++A V++ M + LG+ + + S + L
Sbjct: 21 RDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTAL-LSAFALSGHHEEAKTLFDT 79
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
+ L + ++ + A I DAK FD++PE+++V + M+ RG
Sbjct: 80 MQERDL--------IAWTIMLTVLATFSNIEDAKYHFDQMPERDLVAWTAMLAANAERGQ 131
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
+E +R F M +++ SWT++++ ++G + A +F M L + ++LT
Sbjct: 132 MENARETFDQMPERNLFSWTSLLSAYGRSGDVKAAGRVFDSMPEWNLV----AWTAMLT- 186
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
G L+ + + AF + ++ +A++ Y ++Y +F+ M ++++SW
Sbjct: 187 -GYSLSGDVVRAKRAFDSMPER--DLIAWTAMLSAYAFNGHLRYTREIFQRMPERDLISW 243
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRN-----GIEPDDFTLGSVISSCANLASLEEGTQFH 298
M+ +N EE+ ++F M R+ G+ P+ T +++ +C+ L +L EG + H
Sbjct: 244 ATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIH 303
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G + + VSNALV FYG+CG + D+ +F+ M RD +SW++++S +A+ G+ +
Sbjct: 304 AAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVD 363
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
E ++L+ +MLS G PD++ I VL ACS +G+VE +F +V + + P +HY CM
Sbjct: 364 EAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACM 423
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
+D+L RAG+L +A+ + MPF P + + T+LS+C+++ +VE G+ AAE + ELDP N
Sbjct: 424 VDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENS 483
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
+ Y+ L++IY++ + +++R+ M E+G++K PGCSWI+ RVH F A D P D
Sbjct: 484 SPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAGDKMHPQRD 543
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
+IYAE+++L R+M + GY D VL DVE EK +L +HSEKLAIAFGL+ PPG P+
Sbjct: 544 EIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLISTPPGAPL 603
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R+VKNLRVCSDCH ATK ISK+T REILVRD RFH F+NG CSC D+W
Sbjct: 604 RIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFQNGMCSCNDYW 652
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/568 (40%), Positives = 346/568 (60%), Gaps = 28/568 (4%)
Query: 95 DAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGL 154
+A++ FD++PE N + +N +++G ++ G++ E+R++F M +++ +SWT MI G +Q GL
Sbjct: 12 EARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGL 71
Query: 155 EREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA---LEEGKQIHAFIIRNDHKDNVFV 211
EA LF M + S GGL+ ++E +Q+ + D V
Sbjct: 72 IEEAELLFWRMPERNVV-------SWTVMLGGLIEDGRVDEARQLFDMMPVKD----VVA 120
Query: 212 GSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG-------------YGQNGCSEE 258
+ ++D C + A +F M +NVV+WT+M+ G Y + G E
Sbjct: 121 STNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELE 180
Query: 259 AVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVT 318
A+ +F MQR G+ P ++ SV+S C +LASL+ G Q H + + + I VS+ L+T
Sbjct: 181 ALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLIT 240
Query: 319 FYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVT 378
Y KCG++ + R+F+ + +D V W ++++GYA+ G + +++F M S + PDE+T
Sbjct: 241 MYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEIT 300
Query: 379 LIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
IGVLSACS G V++G FE M +Y + P +HY CM+D+L RAG+L EA + I M
Sbjct: 301 FIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENM 360
Query: 439 PFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVS 498
P DAI W LL +CR H N+++ + AA+ LL+L+P N Y+LLS++Y+S+ +W V
Sbjct: 361 PVEADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVV 420
Query: 499 QLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS-PYSDQIYAELEKLNRKMIKEGYV 557
+LR+TMR K +RK PGCSWI+ +VHIFS +S P + I +L KL + + GY
Sbjct: 421 ELRKTMRAKNLRKSPGCSWIEVDKKVHIFSGGGSTSHPEHEMILKKLGKLGALLREAGYC 480
Query: 558 PDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYI 617
PD S V+HDV+ EK+ L HSEKLA+A+GLL +P G+PIRV+KNLRVC D H+ K I
Sbjct: 481 PDGSFVMHDVDEEEKVHSLRDHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDSHSTIKLI 540
Query: 618 SKITQREILVRDAVRFHLFKNGECSCGD 645
+++T REI++RD RFH FK+G CSC D
Sbjct: 541 AQVTGREIILRDTNRFHHFKDGLCSCSD 568
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 197/381 (51%), Gaps = 30/381 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +SWN L+SG+ +G +++A KV++ M + + ++++ M+ ++
Sbjct: 20 MPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNV-----VSWTAMIRGYVQEGLIEE 74
Query: 61 GRQIHGHILKFGFGSY-VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+ + + S+ V +G + D G + +A++ FD +P K++V MI GL
Sbjct: 75 AELLFWRMPERNVVSWTVMLGGLIED-----GRVDEARQLFDMMPVKDVVASTNMIDGLC 129
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITG-------------LMQNGLEREAIDLFREMR 166
G + E+R +F M ++ ++WT+MI+G + G E EA+ LF M+
Sbjct: 130 SEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQ 189
Query: 167 LEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIK 226
EG+ + SVL+ CG L +L+ G+Q+H+ ++R+ +++V S L+ MY KC +
Sbjct: 190 REGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLV 249
Query: 227 YAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCA 286
A+ VF + K++V W +++ GY Q+G E+A+++F +M + I PD+ T V+S+C+
Sbjct: 250 TAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACS 309
Query: 287 NLASLEEGTQFHGRSLVTGLISFITVSNA-LVTFYGKCGNIEDSHRLFNEMNVR-DEVSW 344
++EG + + T A +V G+ G + ++ L M V D + W
Sbjct: 310 YTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVW 369
Query: 345 TALVSGYAKFGKANETIDLFE 365
AL+ + ++ +DL E
Sbjct: 370 GALLGAC----RTHKNLDLAE 386
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 118/279 (42%), Gaps = 44/279 (15%)
Query: 219 YCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFT 277
Y + K + A +F M N +SW ++ GY QNG EA K+F M +RN +
Sbjct: 4 YFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMI 63
Query: 278 LG--------------------SVISSCANLASL-EEGTQFHGRSLVTGL-ISFITVSNA 315
G +V+S L L E+G R L + + + S
Sbjct: 64 RGYVQEGLIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVASTN 123
Query: 316 LVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG-------------YAKFGKANETID 362
++ G + ++ +F+EM R+ V+WT+++SG Y + G E +
Sbjct: 124 MIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALA 183
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK-EYGIRPIHDHY--TCMI 419
LF M G++P ++I VLS C ++ GR +V+ ++ I D Y + +I
Sbjct: 184 LFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDI----DIYVSSVLI 239
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ + G L AK ++ D + W ++++ HG
Sbjct: 240 TMYIKCGDLVTAKRVFDRFS-SKDIVMWNSIIAGYAQHG 277
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 242/622 (38%), Positives = 342/622 (54%), Gaps = 34/622 (5%)
Query: 28 VYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL--GRQIHGHILKFGFGSYVFVGSPLVD 85
++ L L L N S +TF L S+SR L G Q+H LK + V + L+
Sbjct: 56 LHALRLHCLLPNPSHLTFPIAL-KSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLT 114
Query: 86 MYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTM 145
+YA+ GL++ A+R FDE+P + V SWT +
Sbjct: 115 LYARCGLLHRAQRVFDEMPHPSTV-------------------------------SWTAL 143
Query: 146 ITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH 205
IT M G REA+ + R G+ D FT VLTAC + L G+ + +
Sbjct: 144 ITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGI 203
Query: 206 KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCN 265
+VFV +A VD+Y KC + A VF M K+ V+W AM+ GY NG EA+ +F
Sbjct: 204 AQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLA 263
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
MQ G+ PD + + +S+C L +L+ G Q + + AL+ Y KCG+
Sbjct: 264 MQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGS 323
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
++ +F +M +D + W A++ G G L +M G+K ++ T IG+L +
Sbjct: 324 TAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCS 383
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
C+ GL++ GR YF M K Y I P +HY C++D+LSRAG L+EA I+ MP P +A+
Sbjct: 384 CTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAV 443
Query: 446 GWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
LL C+IH N E+ + L+ L+P+N +YV+LS+IY+++G+W+ ++LR M+
Sbjct: 444 ILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMK 503
Query: 506 EKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLH 565
EKGV K P CSW++++ +VH F D S P SDQIY +L++L +M GY P V+
Sbjct: 504 EKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMF 563
Query: 566 DVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREI 625
DVE EK L HHSEKLAIAF LL PG IRV KNLRVCSDCH A K IS+IT REI
Sbjct: 564 DVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCHTAIKLISRITHREI 623
Query: 626 LVRDAVRFHLFKNGECSCGDFW 647
+VRD RFH F++G CSC D+W
Sbjct: 624 IVRDNNRFHCFRDGSCSCNDYW 645
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 179/377 (47%), Gaps = 42/377 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP VSW LI+ + G + +AV V +G+ S F+ + ++++ R DL
Sbjct: 132 MPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDS---FTAVRVLTACARVADL 188
Query: 61 --GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G + + G VFV + VD+Y K G + A+ FD++ +K+ V + M
Sbjct: 189 ATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAM---- 244
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+ G NG REA+DLF M+ EG+ D +
Sbjct: 245 ---------------------------VGGYASNGHPREALDLFLAMQAEGVRPDCYAVA 277
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
L+AC L AL+ G+Q + ++ DN +G+AL+DMY KC S A VF+ M K
Sbjct: 278 GALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKK 337
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-F 297
+++ W AM++G G G + A + M+++G++ +D T ++ SC + +++G + F
Sbjct: 338 DIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYF 397
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALVSGYAKFGK 356
H + + + I +V + G ++++H+L ++M + + V AL+ G K
Sbjct: 398 HNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGC----K 453
Query: 357 ANETIDLFEKMLSHGLK 373
+ +L E +L+ ++
Sbjct: 454 IHRNAELAEHVLTQLIR 470
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 127/284 (44%), Gaps = 28/284 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRR--CVDLGR 62
D V+W ++ G+AS+G +A+ ++ M +G+ ++ +S+ R +DLGR
Sbjct: 237 DAVAWGAMVGGYASNGHPREALDLFLAMQAEGV---RPDCYAVAGALSACTRLGALDLGR 293
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
Q + F +G+ L+DMYAK G +A F ++ +K+I+++N MI GL G
Sbjct: 294 QAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGL---G 350
Query: 123 LVEESRRLFR--GMKDKDSI-----SWTTMITGLMQNGLEREAIDLFREM-RLEGLAMDQ 174
+ + F G +K + ++ ++ GL ++ F M +L ++
Sbjct: 351 MTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRI 410
Query: 175 FTFGSV--LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
+G + L + GLL ++ H I N + AL+ ++ + AE V
Sbjct: 411 EHYGCIVDLLSRAGLL-----QEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVL 465
Query: 233 ----RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE 272
R W N ++ + Y G E+A K+ +M+ G+E
Sbjct: 466 TQLIRLEPW-NSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVE 508
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/524 (41%), Positives = 328/524 (62%)
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
++ + +F + + S W MI G +G +++L+ +M +GL D+F F L +
Sbjct: 768 IDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKS 827
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C GL L+ GK IH ++ +++FV +ALVDMY KC I+ A VF MA +++VSW
Sbjct: 828 CAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSW 887
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
T+M+ GY NG + E + F M+ +G+ P+ ++ SV+ +C NL +L +G FH +
Sbjct: 888 TSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQ 947
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
TG I V+ A++ Y KCG+++ + LF+E +D V W+A+++ Y G + IDL
Sbjct: 948 TGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDL 1007
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F++M+ G++P VT VLSACS +GL+E+G+ YF++M +E+ I +Y CM+D+L
Sbjct: 1008 FDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLG 1067
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
RAG+L EA I MP PDA W +LL +CRIH N+++ + A+ L LDP + +VL
Sbjct: 1068 RAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVL 1127
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LS+IYA+K +W+ V ++R+ M +G K G S ++Y ++VH F D S P +++YA+
Sbjct: 1128 LSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAK 1187
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
LE+L M GYVP VLHD+E K L++HSE+LAIAFGL+ PG +R+ KN
Sbjct: 1188 LEELAAPMKHLGYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKN 1247
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LR+C DCHNA K ISKI R ILVRD RFH F++G CSCGD+W
Sbjct: 1248 LRICGDCHNAIKLISKIVNRVILVRDMHRFHRFEDGVCSCGDYW 1291
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 192/563 (34%), Positives = 314/563 (55%), Gaps = 32/563 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V W +++G+ + +A+ +++ M+ L +T +++ + V G +
Sbjct: 169 DTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCV 228
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG +++ F + + + L+++YAK G A F ++PE
Sbjct: 229 HGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPE------------------- 269
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
KD ISW+TMI N EA++LF EM + + T S L AC
Sbjct: 270 ------------KDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQAC 317
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
LEEGK+IH + + + V +AL+DMY KC A +F+ + K+VVSW
Sbjct: 318 AVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWV 377
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
A+L GY QNG + +++ +F NM +GI+PD + ++++ + L ++ HG + +
Sbjct: 378 ALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRS 437
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G S + V +L+ Y KCG++ D+ +LF M VRD V W+++++ Y G+ E +++F
Sbjct: 438 GFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIF 497
Query: 365 EKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
++M+ + ++P+ VT + +LSACS AGLVE+G F+ MV +Y +RP +H+ M+D+L
Sbjct: 498 DQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLG 557
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
R G+L +A IN+MP P W LL +CRIH N+E+G+ AA++L LDP + Y+L
Sbjct: 558 RIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYIL 617
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LS+IYA GKWD+V++LR ++E+G++K G S ++ + VH F A D P S +IY
Sbjct: 618 LSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYEL 677
Query: 544 LEKLNRKMIKEGYVPDMSSVLHD 566
L KL +M KE Y+PD+ +LHD
Sbjct: 678 LRKLEAQMGKEVYIPDLDFLLHD 700
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 226/452 (50%), Gaps = 35/452 (7%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN + + + +++++LM+ T L + R ++LG+ IHG
Sbjct: 70 WNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFA 129
Query: 69 LKFG-FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
K GS +FVGS LV++Y+K G + +A + F+E + V++ +M+T
Sbjct: 130 KKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVT----------- 178
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAMDQFTFGSVLTACGG 186
G QN EA+ LF +M ++ + +D T SV++AC
Sbjct: 179 --------------------GYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQ 218
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
LL ++ G +H +IR + ++ + ++L+++Y K K A ++F M K+V+SW+ M
Sbjct: 219 LLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTM 278
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ Y N + EA+ +F M EP+ T+ S + +CA +LEEG + H ++ G
Sbjct: 279 IACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGF 338
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+VS AL+ Y KC +++ LF + +D VSW AL+SGYA+ G A +++ +F
Sbjct: 339 ELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRN 398
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
MLS G++PD V ++ +L+A S G+ ++ +V+ G +I++ S+ G
Sbjct: 399 MLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRS-GFNSNVFVGASLIELYSKCG 457
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
L +A M D + W++++++ IHG
Sbjct: 458 SLGDAVKLFKGM-IVRDVVIWSSMIAAYGIHG 488
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 191/392 (48%), Gaps = 34/392 (8%)
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
Q+H + K G F + L +YAK + A++ FDE P N+ ++N+ + R
Sbjct: 22 QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
EE+ RLF M + G A D FT L
Sbjct: 82 QWEETLRLFHLM------------------------------ICTAGEAPDNFTIPIALK 111
Query: 183 ACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
AC GL LE GK IH F +ND ++FVGSALV++Y KC + A VF + V
Sbjct: 112 ACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTV 171
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
WT+M+ GY QN EEA+ +F M + + D TL SV+S+CA L +++ G+ HG
Sbjct: 172 LWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGL 231
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ + + N+L+ Y K G + + LF++M +D +SW+ +++ YA ANE
Sbjct: 232 VIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEA 291
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++LF +M+ +P+ VT++ L AC+ + +E+G+ +I V + G T +ID
Sbjct: 292 LNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWK-GFELDFSVSTALID 350
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ + +EA ++P D + W LLS
Sbjct: 351 MYMKCSCPDEAVDLFQRLP-KKDVVSWVALLS 381
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 193/397 (48%), Gaps = 46/397 (11%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN++I G A+ G ++++Y+ M++ GL + F L + + G+ IH H+
Sbjct: 786 WNVMIRGFATDGRFLSSLELYSKMMEKGL-KPDKFAFPFALKSCAGLSDLQRGKVIHQHL 844
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+ G + +FV + LVDMYAK G I E +R
Sbjct: 845 VCCGCSNDLFVDAALVDMYAKCGDI-------------------------------EAAR 873
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
+F M +D +SWT+MI+G NG E + F MR G+ ++ + SVL ACG L
Sbjct: 874 LVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLG 933
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
AL +G+ H+++I+ + ++ V +A++DMY KC S+ A +F A K++V W+AM+
Sbjct: 934 ALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIA 993
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
YG +G +A+ +F M + G+ P T V+S+C++ LEEG + + + +
Sbjct: 994 SYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYF-QLMTEEFVI 1052
Query: 309 FITVSN--ALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKANETIDLFE 365
+SN +V G+ G + ++ L M V + S W +L+ + + +DL E
Sbjct: 1053 ARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGAC----RIHNNLDLAE 1108
Query: 366 KMLSHGLKPD------EVTLIGVLSACSRAGLVEKGR 396
K+ H D V L + +A SR VEK R
Sbjct: 1109 KIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVR 1145
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 159/301 (52%), Gaps = 33/301 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D +SW+ +I+ +A++ + N+A+ +++ M++ + +T + L + R ++
Sbjct: 267 MPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRF-EPNSVTVVSALQACAVSRNLEE 325
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G++IH + GF V + L+DMY K +A F LP+K++V + +++G +
Sbjct: 326 GKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQ 385
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G+ +S +FR M + +G++ +A+ + + +
Sbjct: 386 NGMAYKSMGVFRNM---------------LSDGIQPDAVAVVK----------------I 414
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A L ++ +H +++R+ NVFVG++L+++Y KC S+ A +F+ M ++V
Sbjct: 415 LAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDV 474
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQFHG 299
V W++M+ YG +G EA++IF M +N + P++ T S++S+C++ +EEG +
Sbjct: 475 VIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFD 534
Query: 300 R 300
R
Sbjct: 535 R 535
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 149/302 (49%), Gaps = 14/302 (4%)
Query: 195 QIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNG 254
Q+H+ + + + F + L +Y KC S++ A VF NV W + L Y +
Sbjct: 22 QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81
Query: 255 CSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI-SFITV 312
EE +++F M G PD+FT+ + +CA L LE G HG + I S + V
Sbjct: 82 QWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFV 141
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM-LSHG 371
+ALV Y KCG + ++ ++F E D V WT++V+GY + E + LF +M +
Sbjct: 142 GSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDC 201
Query: 372 LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY--GIRPIHDHYTCMIDILSRAGRLE 429
+ D VTL+ V+SAC++ V+ G ++++ G P+ ++++ ++ G +
Sbjct: 202 VVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPL---VNSLLNLYAKTGCEK 258
Query: 430 EAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL--DPYNPASYVLLSSI 487
A + +KMP D I W+T+++ + N E A E+ + P S ++S++
Sbjct: 259 IAANLFSKMP-EKDVISWSTMIAC---YANNEAANEALNLFHEMIEKRFEPNSVTVVSAL 314
Query: 488 YA 489
A
Sbjct: 315 QA 316
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 121/285 (42%), Gaps = 65/285 (22%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSW +ISG+A +G ++ + ++LM G+ +R++ ++L+ + +
Sbjct: 879 MAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIP-NRVSILSVLLACGNLGALRK 937
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G H ++++ GF + V + ++DMY+K G + A+ FDE
Sbjct: 938 GEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDE------------------ 979
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
KD + W+ MI +G R+AIDLF +M G+ TF V
Sbjct: 980 -------------TAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCV 1026
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+AC LEEGK MY + + ++ + + +
Sbjct: 1027 LSACSHSGLLEEGK-----------------------MYFQLMTEEFVIA-------RKL 1056
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
++ M+ G+ G EAV + NM +EPD GS++ +C
Sbjct: 1057 SNYACMVDLLGRAGQLSEAVDLIENMP---VEPDASIWGSLLGAC 1098
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 38/210 (18%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VSW L+SG+A +G ++ V+ ML DG+ + +L SS
Sbjct: 368 LPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGI-QPDAVAVVKILAASSELGIFQQ 426
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+HG++++ GF S VFVG+ L+++Y+K G + DA + F
Sbjct: 427 ALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLF-------------------- 466
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAMDQFTFGS 179
+GM +D + W++MI +G EA+++F +M + + + TF S
Sbjct: 467 -----------KGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLS 515
Query: 180 VLTACGGLLALEEG-----KQIHAFIIRND 204
+L+AC +EEG + +H + +R D
Sbjct: 516 ILSACSHAGLVEEGLKIFDRMVHDYQLRPD 545
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 90/190 (47%), Gaps = 13/190 (6%)
Query: 277 TLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
L + +C N S+ +Q H + TG++ + L + Y KC +++ + ++F+E
Sbjct: 6 VLVDLFQACNNGRSV---SQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDET 62
Query: 337 NVRDEVSWTALVSGYAKFGKANETIDLFEKML-SHGLKPDEVTLIGVLSACSRAGLVEKG 395
+ W + + Y + + ET+ LF M+ + G PD T+ L AC+ ++E G
Sbjct: 63 PHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELG 122
Query: 396 R--HYFEIMVKEYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
+ H F E G D + + ++++ S+ G++ EA + PD + W +++
Sbjct: 123 KVIHGFAKKNDEIG----SDMFVGSALVELYSKCGQMGEALKVFEEFQ-RPDTVLWTSMV 177
Query: 452 SSCRIHGNVE 461
+ + + + E
Sbjct: 178 TGYQQNNDPE 187
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/644 (36%), Positives = 374/644 (58%), Gaps = 32/644 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D ++WN ++ + A++ Y ML+ R TF ++L + +G+ +
Sbjct: 42 DVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVL 101
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG ++K+ S +++ + L++MYA G + A
Sbjct: 102 HGQVVKYMLHSDLYIETTLLNMYAACGDLKSA---------------------------- 133
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
R LF M ++ + WT+MI+G M+N EA+ L+++M +G + D+ T ++++AC
Sbjct: 134 ---RFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSAC 190
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L L G ++H+ I D K +GSALV+MY KC +K A VF ++ K+V +W+
Sbjct: 191 AELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWS 250
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQR-NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
A++ GY +N S EA+++F + + + P++ T+ +VIS+CA L LE G H
Sbjct: 251 ALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITR 310
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
T ++++N+L+ + KCG+I+ + R+F+ M+ +D +SW ++V+G A G E +
Sbjct: 311 TQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQ 370
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F M + L+PDE+T IGVL+ACS AGLV++G+ F + YG+R +HY CM+D+L
Sbjct: 371 FHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLC 430
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
RAG L EA+ FI MP PD W ++L +CR++ N+E+G+ AA LLEL+P N Y+L
Sbjct: 431 RAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYIL 490
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LS+IYA + W+ V ++R M EKG++K PGCS + + H F A D S P +I
Sbjct: 491 LSNIYARRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIM 550
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
L ++ K+ GYV D S VL +++ ++K + ++ HSEKLA+ +GLL G I ++KN
Sbjct: 551 LRQVREKLKLVGYVADTSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKN 610
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LRVCSDCH K +SKI QR+I +RD RFH FK+G CSC D+W
Sbjct: 611 LRVCSDCHTLIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 153/298 (51%), Gaps = 33/298 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + V W +ISG+ + N+A+ +Y M +DG +T +T++ + + + +
Sbjct: 140 MGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSP-DEVTMATLVSACAELKDLGV 198
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G ++H HI + +GS LV+MYAK G + A++ FD+L +K++ ++ +I G ++
Sbjct: 199 GMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVK 258
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR-LEGLAMDQFTFGS 179
N EA+ LFRE+ + ++ T +
Sbjct: 259 -------------------------------NNRSTEALQLFREVAGGSNMRPNEVTILA 287
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
V++AC L LE G+ +H +I R +V + ++L+DM+ KC I A+ +F +M++K+
Sbjct: 288 VISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKD 347
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
++SW +M+ G +G EA+ F MQ ++PD+ T V+++C++ ++EG +
Sbjct: 348 LISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKL 405
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/641 (36%), Positives = 373/641 (58%), Gaps = 32/641 (4%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
++W+ +I+ A HG +A++ + +M ++G+ +R+TF ++L ++ ++ +IH
Sbjct: 328 ITWSAIITAFADHGHCGEALRYFRMMQQEGILP-NRVTFISLLNGFTTPSGLEELSRIHL 386
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
I + G + + LV++Y + DA+ FD+L N++ +N+MI G+ +
Sbjct: 387 LITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMI------GIYVQ 440
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
R +A+ LFR M+ +G+ D+ F ++L AC
Sbjct: 441 CER-------------------------HDDALQLFRTMQQQGIQPDRVNFMTILGACTI 475
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
K +H + + + V ++LV+MY K + AE + + M + + +W +
Sbjct: 476 GSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVL 535
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ GY +G S EA++ + +Q I D T SV+++C + SL EG H ++ GL
Sbjct: 536 INGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGL 595
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
S + V NAL Y KCG++E++ R+F+ M +R VSW ++ YA+ G++ E + L K
Sbjct: 596 DSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRK 655
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M G+K + +T + VLS+CS AGL+ +G YF + + GI +HY C++D+L RAG
Sbjct: 656 MEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAG 715
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+L+EA+ +I+KMP P + WA+LL +CR+ +++ GK AA LLELDP N ++ V+LS+
Sbjct: 716 KLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSN 775
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IY+ +G W + ++LRR M + V+K PG S I+ K++VH F D S P + +IY ++E+
Sbjct: 776 IYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEE 835
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
L M + GYVPD VLHDV+ +K +L +HSEKLAIAFGL+ P + + KNLRV
Sbjct: 836 LCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPETSSLHIFKNLRV 895
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCH ATK+ISKIT REI+VRD RFH F++G CSC D+W
Sbjct: 896 CEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 936
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 136/507 (26%), Positives = 240/507 (47%), Gaps = 69/507 (13%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSWN++IS ++S+ S +A+ +++ ML +G+ + IT +L S R + G +H
Sbjct: 24 VSWNVMISAYSSYKSFQEALALFHAMLLEGVAP-NAITLVAVLNSCGSFRELRDGILVHA 82
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
L+ GF V + L++MY K G + DA+ F+E+ EKN+V +N M+
Sbjct: 83 LSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAML----------- 131
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
G+ W + A++LF M LEG+ + TF +VL +
Sbjct: 132 ------GVYSLQGCCW-------------KLAVELFTRMLLEGVKANVITFLNVLNSVVD 172
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
AL +GK IH+ + ++H +VFV +ALV+ Y KC S+ A VF M ++V +W +M
Sbjct: 173 PDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSM 232
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ Y + S EA IF MQ+ G D T S++ +C N +L+ G T
Sbjct: 233 ISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSF 292
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ V AL+T Y +C + ED+ ++F M + ++W+A+++ +A G E + F
Sbjct: 293 ELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRM 352
Query: 367 MLSHGLKPDEVTLIGVLSA-CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
M G+ P+ VT I +L+ + +GL E R +++ E+G+ ++++ R
Sbjct: 353 MQQEGILPNRVTFISLLNGFTTPSGLEELSR--IHLLITEHGLDDTTTMRNALVNVYGRC 410
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
++A++ +++ P+ I W +++
Sbjct: 411 ESPDDARTVFDQLEL-PNLISWNSMI---------------------------------- 435
Query: 486 SIYASKGKWDHVSQLRRTMREKGVRKD 512
IY + D QL RTM+++G++ D
Sbjct: 436 GIYVQCERHDDALQLFRTMQQQGIQPD 462
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 153/589 (25%), Positives = 274/589 (46%), Gaps = 66/589 (11%)
Query: 7 VSWNLLISGHASHGSV-NDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIH 65
V+WN ++ ++ G AV+++ ML +G+ + ITF +L + G+ IH
Sbjct: 125 VTWNAMLGVYSLQGCCWKLAVELFTRMLLEGV-KANVITFLNVLNSVVDPDALRKGKFIH 183
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
+ + VFV + LV+ Y K G + DA++ FD
Sbjct: 184 SCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFD------------------------ 219
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
GM + +W +MI+ + EA +F+ M+ EG D+ TF S+L AC
Sbjct: 220 -------GMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACV 272
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
L+ GK + I + ++FVG+AL+ MY +C+S + A VF M N+++W+A
Sbjct: 273 NPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSA 332
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
++ + +G EA++ F MQ+ GI P+ T S+++ + LEE ++ H G
Sbjct: 333 IITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHG 392
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
L T+ NALV YG+C + +D+ +F+++ + + +SW +++ Y + + ++ + LF
Sbjct: 393 LDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFR 452
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
M G++PD V + +L AC+ G + R V+E G+ T ++++ ++A
Sbjct: 453 TMQQQGIQPDRVNFMTILGACT-IGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKA 511
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL-LELDPYNPASYVLL 484
G L+ A+ + +M W L++ +HG A + L LE P + +++ +
Sbjct: 512 GELDVAEVILQEMD-EQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISV 570
Query: 485 -----SSIYASKGKWDHVSQLRRTMREKGVRKDP------GCSWIKYKSRVH----IFSA 529
SS ++GK H + + + + K+ C ++ R+ I SA
Sbjct: 571 LNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSA 630
Query: 530 DDWSSPYSDQIYA------ELEKLNRKMIKEG-------YVPDMSSVLH 565
W+ Q YA E+ KL RKM +EG +V +SS H
Sbjct: 631 VSWNGML--QAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSH 677
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 175/341 (51%), Gaps = 3/341 (0%)
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
R G + ++ F ++ ++ +SW MI+ +EA+ LF M LEG+A + T +
Sbjct: 4 RCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITLVA 63
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL +CG L +G +HA + N V +AL++MY KC ++ A+SVF MA KN
Sbjct: 64 VLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKN 123
Query: 240 VVSWTAMLVGYGQNGCS-EEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
VV+W AML Y GC + AV++F M G++ + T +V++S + +L +G H
Sbjct: 124 VVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIH 183
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
+ + V+ ALV Y KCG++ D+ ++F+ M R +W +++S Y+ ++
Sbjct: 184 SCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSG 243
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
E +F++M G + D VT + +L AC ++ G+H E + E T +
Sbjct: 244 EAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRE-SISETSFELDLFVGTAL 302
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
I + +R E+A +M + I W+ ++++ HG+
Sbjct: 303 ITMYARCRSPEDAAQVFGRMK-QTNLITWSAIITAFADHGH 342
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 124/241 (51%), Gaps = 5/241 (2%)
Query: 218 MYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFT 277
MY +C S+ A + F + +NVVSW M+ Y +EA+ +F M G+ P+ T
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 278 LGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN 337
L +V++SC + L +G H SL G V+ AL+ YGKCG + D+ +F EM
Sbjct: 61 LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120
Query: 338 VRDEVSWTALVSGYAKFGKA-NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR 396
++ V+W A++ Y+ G ++LF +ML G+K + +T + VL++ + KG+
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180
Query: 397 HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIG-WATLLSSCR 455
+ V+E T +++ ++ G L +A+ + MP ++G W +++S+
Sbjct: 181 -FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPC--RSVGTWNSMISAYS 237
Query: 456 I 456
I
Sbjct: 238 I 238
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP VSWN ++ +A HG + +K+ M ++G+ L+ ITF ++L S +
Sbjct: 625 MPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGV-KLNGITFVSVLSSCSHAGLIAE 683
Query: 61 GRQIHGHILKFGFGSYVFVG--SPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMI 115
G Q + H L G V LVD+ + G + +A++ ++P E IV + +++
Sbjct: 684 GCQ-YFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLL 740
>gi|222632633|gb|EEE64765.1| hypothetical protein OsJ_19621 [Oryza sativa Japonica Group]
Length = 656
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/626 (38%), Positives = 361/626 (57%), Gaps = 37/626 (5%)
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
+ LG+ +H +++ V + L+ +Y K G + A++ FD +P +N V N +++G
Sbjct: 32 LSLGKAVHARVVRAARFDVVQYNN-LIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSG 90
Query: 118 LLRRGLVEESRRLFR----GMKD---KDSISWTTMITGL----------MQNGLER---- 156
G ++ L R G+ + +++ T + ++ GL
Sbjct: 91 YASSGRHRDALALLRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYV 150
Query: 157 ---------------EAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFII 201
EA+ ++ + AM VL C + G Q+H +
Sbjct: 151 CSAVLHMYCQCAHMDEAVKYSKKHGEKCRAMGSCVICRVLGHCASTKEVVLGSQVHTQAL 210
Query: 202 RNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVK 261
+ + NV+VGSALVDMY KC A VF + KN+VSWTA++ Y QN E+A++
Sbjct: 211 KRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQ 270
Query: 262 IFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYG 321
+F +M+ G+ P++FT ++SCA LA+L+ G ++ TG + V NAL+ Y
Sbjct: 271 LFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYS 330
Query: 322 KCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIG 381
K G++ED+ R+F M RD VSW +++ GYA G+A E ++ F ML P VT IG
Sbjct: 331 KSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIG 390
Query: 382 VLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFP 441
VLSAC++ GLV++G +Y IM+KE G++P +HYTCM+ +L R GRL+EA+ FI
Sbjct: 391 VLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIG 450
Query: 442 PDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLR 501
D + W +LLSSC+++ N +G AE + +L P + +YVLLS++YA +WD V ++R
Sbjct: 451 TDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVR 510
Query: 502 RTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMS 561
R MRE GVRK+PG SWI+ S VH+F+++D PY +QI +L++L K+ GYVP+++
Sbjct: 511 RLMRELGVRKEPGVSWIQVGSEVHVFTSEDKKHPYMEQITKKLQELIDKIKVIGYVPNIA 570
Query: 562 SVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKIT 621
LHDVE +K + L +HSEKLA+AFGL+ P G IR++KN+R+C DCH A K IS T
Sbjct: 571 VALHDVEDEQKEEHLMYHSEKLALAFGLIRTPKGEAIRIMKNVRICDDCHVAIKLISLAT 630
Query: 622 QREILVRDAVRFHLFKNGECSCGDFW 647
R I+VRD VRFH ++G CSC D+W
Sbjct: 631 GRRIVVRDTVRFHCIEDGVCSCDDYW 656
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 207/430 (48%), Gaps = 57/430 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VS NLL+SG+AS G DA+ +L+ L+ S+ + ++ R D+
Sbjct: 76 MPSRNPVSGNLLMSGYASSGRHRDALA----LLRVADFGLNEYVLSSAVAATAHVRSYDM 131
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPE--------------- 105
GRQ HG+ +K G + +V S ++ MY + + +A + + E
Sbjct: 132 GRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMDEAVKYSKKHGEKCRAMGSCVICRVLG 191
Query: 106 -----KNIVMYNTMITGLLRRGL-------------------VEESRRLFRGMKDKDSIS 141
K +V+ + + T L+R L E+ R+F + +K+ +S
Sbjct: 192 HCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVS 251
Query: 142 WTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFII 201
WT ++T QN L +A+ LF +M +EG+ ++FT+ L +C GL L+ G + A +
Sbjct: 252 WTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTM 311
Query: 202 RNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVK 261
+ H + V +AL++MY K S++ A VF +M ++VVSW ++++GY +G + EA++
Sbjct: 312 KTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAME 371
Query: 262 IFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV-TGLISFITVSNALVTFY 320
F +M P T V+S+CA L ++EG + + G+ +V
Sbjct: 372 AFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLL 431
Query: 321 GKCGNIEDSHRLFNEMNV--RDEVSWTALVSG---YAKFGKANETID-LFEKMLSHGLKP 374
+ G ++++ R F E N D V+W +L+S Y +G + + +F+ LKP
Sbjct: 432 CRVGRLDEAER-FIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQ------LKP 484
Query: 375 DEVTLIGVLS 384
+V +LS
Sbjct: 485 KDVGTYVLLS 494
>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
Length = 879
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 247/638 (38%), Positives = 381/638 (59%), Gaps = 34/638 (5%)
Query: 12 LISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKF 71
+I+ + ++A++++ +ML +G+ L RI +L S R ++ GR IHG + +
Sbjct: 274 MITQYTQRERWDEALELFKVMLLEGV-KLDRIACMAVLNACSGPRGLEEGRMIHGFMREI 332
Query: 72 GFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLF 131
F +V G+ L++MY K G + EE+ +F
Sbjct: 333 RFDRHVNAGNALINMYGKCGSL-------------------------------EEAVEVF 361
Query: 132 RGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALE 191
R M+ +D ISW T+I Q+ EA+ L M+L+G+ D+ +F + L C AL
Sbjct: 362 RSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEALA 421
Query: 192 EGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYG 251
+G+ IH++I+ + K +V + +A++DMY CKS A VFR M ++ VSW AM+ Y
Sbjct: 422 KGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMITAYA 481
Query: 252 -QNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFI 310
Q S EA+ +F MQ +G PD + + +S+CA ASL EG H R TGL S +
Sbjct: 482 AQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNM 541
Query: 311 TVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH 370
TV+NA++ Y K G++ + ++F +M + D +SW ++S +A+ G A++ + F +M
Sbjct: 542 TVANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHE 601
Query: 371 GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY-GIRPIHDHYTCMIDILSRAGRLE 429
G P++VT + V+SACS GLV+ G F ++ ++ I P +HY CM+D+++RAG+L+
Sbjct: 602 GKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLD 661
Query: 430 EAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYA 489
A+ FI P PD + +T+L + ++H +VE + +AE L+EL P A+YV+LS++Y
Sbjct: 662 AAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYD 721
Query: 490 SKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNR 549
GK D +++RR M EK +RK+P S I K RVH F D ++ + +I ELE+L+
Sbjct: 722 EVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPEILEELERLSL 781
Query: 550 KMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSD 609
+M K GY PD + +LHDV +K ++L++HSEKLAIAFGL+ PG +R++KNLRVC D
Sbjct: 782 EMAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTSLRIIKNLRVCGD 841
Query: 610 CHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
CH ATK+ISKIT REI+VRD+ RFH F NG CSCGD+W
Sbjct: 842 CHTATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/464 (28%), Positives = 229/464 (49%), Gaps = 50/464 (10%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI-- 64
V WN +I+ +A A++V+ ML +G+ RITF +L S + +++ + +
Sbjct: 167 VEWNAMITAYAQQDHHEQAIQVFYAMLLEGV-KAERITFIGVLDACSKLKDLEVAKLVKL 225
Query: 65 ------HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
H H+ F + LV+ Y G + A R F
Sbjct: 226 CVEEREHDHLHDSSFAT------ALVNFYGSCGDLEQAFRAFSR---------------- 263
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
RL + I T MIT Q EA++LF+ M LEG+ +D+
Sbjct: 264 ---------HRL-------ELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACM 307
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
+VL AC G LEEG+ IH F+ +V G+AL++MY KC S++ A VFR+M +
Sbjct: 308 AVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHR 367
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+V+SW ++ +GQ+ EA+ + MQ +G++ D + + + CA +L +G H
Sbjct: 368 DVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRMIH 427
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK-A 357
+ +G+ + + + NA++ YG C + +D+ R+F M RD+VSW A+++ YA + +
Sbjct: 428 SWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMITAYAAQPRLS 487
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
+E + LF++M HG PD ++ + LSAC+ + +G+ ++E G+
Sbjct: 488 SEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGK-LLHDRIRETGLESNMTVANA 546
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
++++ +++G L A+ KMP PD I W ++S+ HG+ +
Sbjct: 547 VLNMYAKSGSLVLARKMFGKMPL-PDVISWNGMISAFAQHGHAD 589
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 199/422 (47%), Gaps = 57/422 (13%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
++ +L + + R +DLG+++H I K F+G LV MY G + DAK FD +P
Sbjct: 1 YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
++ + + +I G + +S +A+ LFR
Sbjct: 61 VQDALTWARLIRA---HGQIGDS----------------------------EQALHLFRS 89
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLA-LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
M+LEG+A F +VL AC LEEG++IH + + + +V + L+ MY KC
Sbjct: 90 MQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCS 149
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
S++ A VF + K VV W AM+ Y Q E+A+++F M G++ + T V+
Sbjct: 150 SVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLD 209
Query: 284 SCANLASLE------------EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHR 331
+C+ L LE E H S T ALV FYG CG++E + R
Sbjct: 210 ACSKLKDLEVAKLVKLCVEEREHDHLHDSSFAT----------ALVNFYGSCGDLEQAFR 259
Query: 332 LFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGL 391
F+ + + + TA+++ Y + + +E ++LF+ ML G+K D + + VL+ACS
Sbjct: 260 AFSRHRL-ELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRG 318
Query: 392 VEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
+E+GR M + R + + +I++ + G LEEA M D I W T++
Sbjct: 319 LEEGRMIHGFMREIRFDRHV-NAGNALINMYGKCGSLEEAVEVFRSMQH-RDVISWNTII 376
Query: 452 SS 453
++
Sbjct: 377 AA 378
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 204/455 (44%), Gaps = 36/455 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D ++W LI H G A+ ++ M +G+ ++R + + S+ ++
Sbjct: 59 MPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEE 118
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR+IHG + S +V + L+ MY K + DA++ FD + K +V +N M
Sbjct: 119 GRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAM------ 172
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
IT Q +AI +F M LEG+ ++ TF V
Sbjct: 173 -------------------------ITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGV 207
Query: 181 LTACGGLLALEEGKQIHAFI--IRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
L AC L LE K + + +DH + +ALV+ Y C ++ A F +
Sbjct: 208 LDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDLEQAFRAFSRHRLE 267
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+++ TAM+ Y Q +EA+++F M G++ D +V+++C+ LEEG H
Sbjct: 268 LILA-TAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRMIH 326
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G + NAL+ YGKCG++E++ +F M RD +SW +++ + + +
Sbjct: 327 GFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHP 386
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
E + L M G+K D+++ + L C+ + + KGR +V E GI+ +
Sbjct: 387 EALHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRMIHSWIV-ESGIKADVMLDNAI 445
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+D+ ++A M D + W ++++
Sbjct: 446 LDMYGSCKSTDDASRVFRAMK-ARDQVSWNAMITA 479
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/649 (36%), Positives = 371/649 (57%), Gaps = 37/649 (5%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNL--SRITFSTMLIMSSSRRCVD 59
P+ + VSW +LISG A + +A+ V+ M+ +GN + +T S++L ++ +
Sbjct: 83 PYKNVVSWTILISGLAKNDCFVEAIDVFREMI---MGNFKPNAVTISSVLPAFANLGLIR 139
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+ + +H ++ GF VFV + LVDMY+K G + A
Sbjct: 140 IAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVA----------------------- 176
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
R+LF M +++ ++W +++G +G EAIDLF MR +GL +D +T S
Sbjct: 177 --------RQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMS 228
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
++ A + L+ G IH FIIR ++++ + +AL+D+Y + A VF M+ K+
Sbjct: 229 LIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKD 288
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQR-NGIEPDDFTLGSVISSCANLASLEEGTQFH 298
V +WT ML G+ + A+K F M ++ D L ++SSC++ +L++G + H
Sbjct: 289 VAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVH 348
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
++ T + I V +A++ Y CGN+ED+ R F M +D V W A+++G G
Sbjct: 349 ALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGT 408
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
+ IDLF +M GL PDE T + VL ACS AG+V +G F MVK + P HY C+
Sbjct: 409 DAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACV 468
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
IDIL RAG+L+ A SFIN MPF PD ++TLL +CRIHGN+++G ++ + E++P +
Sbjct: 469 IDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDA 528
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
YVLLS++YA G W+ V R ++R K ++KDPG S I+ ++ F A + P
Sbjct: 529 GYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIEINQEIYTFMAGEKDHPQYF 588
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
+I L+ L K+ K GYVP+ + +L DV K +L HHSEK+AIAFGL+ P I
Sbjct: 589 KIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPETII 648
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R+ KNLR C DCH A+K++SK+ R ++++DA RFH+F++G CSC D+W
Sbjct: 649 RITKNLRTCDDCHTASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRDYW 697
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 124/386 (32%), Positives = 213/386 (55%), Gaps = 8/386 (2%)
Query: 107 NIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR 166
N + N+++ + GL+ +++++F K+ +SWT +I+GL +N EAID+FREM
Sbjct: 55 NTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMI 114
Query: 167 LEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIK 226
+ + T SVL A L + K +H F +R + NVFV +ALVDMY K +
Sbjct: 115 MGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMG 174
Query: 227 YAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCA 286
A +F +M+ +NVV+W A++ GY +G SEEA+ +F M+R G+ D +T+ S+I +
Sbjct: 175 VARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASL 234
Query: 287 NLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTA 346
++ L+ GT HG + TG + + AL+ Y ++D+HR+F+EM+V+D +WT
Sbjct: 235 SVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTL 294
Query: 347 LVSGYAKFGKANETIDLFEKMLS-HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE 405
+++G++ + I F KML LK D + L+G+LS+CS +G +++GR + +K
Sbjct: 295 MLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKT 354
Query: 406 YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKW 465
I + +ID+ + G LE+AK F M D + W +++ ++G G
Sbjct: 355 CFANNIFVG-SAVIDMYANCGNLEDAKRFFYGMG-EKDVVCWNAMIAGNGMNG---YGTD 409
Query: 466 AAESLLEL--DPYNPASYVLLSSIYA 489
A + L++ +P +S +YA
Sbjct: 410 AIDLFLQMKGSGLDPDESTFVSVLYA 435
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 130/263 (49%), Gaps = 2/263 (0%)
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
L+ +QIHA II + N F+ ++L++ Y C + A+ +F +KNVVSWT ++ G
Sbjct: 37 LKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISG 96
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
+N C EA+ +F M +P+ T+ SV+ + ANL + H + G
Sbjct: 97 LAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGN 156
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
+ V ALV Y K G + + +LF M+ R+ V+W A+VSGY+ G + E IDLF M
Sbjct: 157 VFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRR 216
Query: 370 HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLE 429
GL D T++ ++ A G ++ G +++ G T ++DI ++
Sbjct: 217 KGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRT-GYENDKHIKTALMDIYVSHNCVD 275
Query: 430 EAKSFINKMPFPPDAIGWATLLS 452
+A ++M D W +L+
Sbjct: 276 DAHRVFSEMSV-KDVAAWTLMLT 297
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 143/310 (46%), Gaps = 47/310 (15%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRR--CV 58
M D +W L+++G +S + A+K +N ML G+ NL + + M I+SS +
Sbjct: 284 MSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKML--GIQNLKLDSIALMGILSSCSHSGAL 341
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
GR++H +K F + +FVGS ++DMYA G + DAKR F + EK++V +N MI G
Sbjct: 342 QQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAG- 400
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
GM NG +AIDLF +M+ GL D+ TF
Sbjct: 401 -------------NGM-----------------NGYGTDAIDLFLQMKGSGLDPDESTFV 430
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHK-DNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
SVL AC + EG QI +++ H N+ + ++D+ + + A S M +
Sbjct: 431 SVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPF 490
Query: 238 KNVVSWTAMLVG----YGQNGCSEE-AVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
+ + L+G +G E + KIF +EP+D ++S+ LA
Sbjct: 491 QPDFDVYSTLLGACRIHGNIKLGHEISQKIF------EMEPNDAGYYVLLSNMYALAGNW 544
Query: 293 EGTQFHGRSL 302
EG + SL
Sbjct: 545 EGVKMTRASL 554
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 6/176 (3%)
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
L L+ Q H + + +GL +SN+L+ Y CG + D+ ++F+ ++ VSWT L
Sbjct: 34 LKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTIL 93
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVE--KGRHYFEIMVKE 405
+SG AK E ID+F +M+ KP+ VT+ VL A + GL+ K H F +
Sbjct: 94 ISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGF 153
Query: 406 YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
G + T ++D+ S+ G + A+ M + + W ++S HG E
Sbjct: 154 EGNVFVE---TALVDMYSKFGCMGVARQLFESMS-ERNVVTWNAIVSGYSDHGFSE 205
>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 212/514 (41%), Positives = 331/514 (64%), Gaps = 1/514 (0%)
Query: 134 MKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEG 193
M +D SWT++I G QN + EA+ L M + FTF S+L A G + G
Sbjct: 1 MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60
Query: 194 KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQN 253
+QIHA ++ D D+V+VGSAL+DMY +C + A +VF + KN VSW A++ G+ +
Sbjct: 61 EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 120
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVS 313
G E + +F MQRNG E FT SV S+ A + +LE+G H + +G V
Sbjct: 121 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 180
Query: 314 NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLK 373
N ++ Y K G++ D+ ++F+ ++ +D V+W ++++ +A++G E + FE+M G+
Sbjct: 181 NTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVH 240
Query: 374 PDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKS 433
+++T + +L+ACS GLV++G+ YF++M KE+ + P DHY ++D+L RAG L +A
Sbjct: 241 LNQITFLSILTACSHGGLVKEGKQYFDMM-KEHNLEPEIDHYVTVVDLLGRAGLLNDALV 299
Query: 434 FINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGK 493
FI KMP P A W LL SCR+H N +IG++AA+ + ELDP + VLL +IYAS G+
Sbjct: 300 FIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQ 359
Query: 494 WDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIK 553
WD +++R+ M+ GV+K+P CSW++ ++ VH+F A+D + P S++IY + E+++ ++ K
Sbjct: 360 WDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRK 419
Query: 554 EGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNA 613
GYVP+ VL V+ E+ L +HSEK+A+AF L+ +P G IR++KN+R+C DCH+A
Sbjct: 420 AGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSA 479
Query: 614 TKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+YISK+ +REI+VRD RFH F +G CSCGD+W
Sbjct: 480 FRYISKVFEREIVVRDTNRFHHFSSGSCSCGDYW 513
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 184/378 (48%), Gaps = 35/378 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D SW LI+G+A + ++A+ + ML+ + TF+++L + + +
Sbjct: 1 MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRF-KPNGFTFASLLKAAGASASSGI 59
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G QIH +K+ + V+VGS L+DMYA+ G + A FD+L KN V +N +I G R
Sbjct: 60 GEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFAR 119
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+G E TT++ +F EM+ G FT+ SV
Sbjct: 120 KGDGE-----------------TTLL--------------MFAEMQRNGFEATHFTYSSV 148
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+A G+ ALE+GK +HA +I++ + + FVG+ ++DMY K S+ A VF + K++
Sbjct: 149 FSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDHVDKKDL 208
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+W +ML + Q G EAV F M++ G+ + T S++++C++ ++EG Q+
Sbjct: 209 VTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDM 268
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKANE 359
L I +V G+ G + D+ +M ++ + W AL+ G + K N
Sbjct: 269 MKEHNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALL-GSCRMHK-NA 326
Query: 360 TIDLFEKMLSHGLKPDEV 377
I F L PD+
Sbjct: 327 KIGQFAADHVFELDPDDT 344
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 247/682 (36%), Positives = 364/682 (53%), Gaps = 67/682 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + ++WN L S + + G + V+ M +G+ + S++L S + +
Sbjct: 303 MPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGV-KPDPMAMSSILPACSQLKDLKS 361
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ IHG +K G VFV + LV++YA + +A+ FD +P +N+V
Sbjct: 362 GKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVV----------- 410
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+W ++ + + G ++ +++FREM L G+ D T S+
Sbjct: 411 --------------------TWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSI 450
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L L+ GK IH F +R+ ++VFV +AL+ +Y KC ++ A+ VF + + V
Sbjct: 451 LHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREV 510
Query: 241 VSWTAMLVGYGQN------------------------------GCS-----EEAVKIFCN 265
SW +L Y N GC EEA++IF
Sbjct: 511 ASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRK 570
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
MQ G +PD+ T+ S++ +C+ L G + H + +NALV Y KCG
Sbjct: 571 MQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGG 630
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+ S +F+ M ++D SW ++ G E + LFEKML +KPD T VLSA
Sbjct: 631 LSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSA 690
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
CS + LVE+G F M +++ + P +HYTC++DI SRAG LEEA FI +MP P AI
Sbjct: 691 CSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAI 750
Query: 446 GWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
W L+ CR++ NVE+ K +A+ L E+DP A+YV L +I + W S++R+ M+
Sbjct: 751 AWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMK 810
Query: 506 EKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLH 565
E+G+ K PGCSW +RVH F A D S+ SD+IY L++L K+ GY PD VLH
Sbjct: 811 ERGITKTPGCSWFHVGNRVHTFVAGDKSNMESDKIYNFLDELFAKIKAAGYKPDTDYVLH 870
Query: 566 DVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREI 625
D++ EK + L +HSEKLA+AFG+L + IRV KNLR+C DCHNA KY+S + I
Sbjct: 871 DIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSNVVGVTI 930
Query: 626 LVRDAVRFHLFKNGECSCGDFW 647
+VRD++RFH FKNG CSC DFW
Sbjct: 931 VVRDSLRFHHFKNGNCSCKDFW 952
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 135/498 (27%), Positives = 240/498 (48%), Gaps = 77/498 (15%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V+WN L S + + G + V+ M+ DG+ +T S +L S + +
Sbjct: 202 MPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGV-KPDPVTVSCILSACSDLQDLKS 260
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ IHG LK G VFV + LV++Y + +A+ FD +P +N+
Sbjct: 261 GKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNV------------ 308
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
I+W ++ + + G ++ +++FREM L G+ D S+
Sbjct: 309 -------------------ITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSI 349
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L L+ GK IH F +++ ++VFV +ALV++Y C ++ A++VF M +NV
Sbjct: 350 LPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNV 409
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+W ++ Y G ++ + +F M NG++PD T+ S++ +C++L L+ G HG
Sbjct: 410 VTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGF 469
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDS--------HR--------------------- 331
++ G++ + V NAL++ Y KC + ++ HR
Sbjct: 470 AVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKG 529
Query: 332 --LFNEMN----VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+F++MN DE++W+ ++ G K + E +++F KM + G KPDE T+ +L A
Sbjct: 530 LYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRA 589
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHD----HYTCMIDILSRAGRLEEAKSFINKMPFP 441
CS + + G+ + Y R D ++D+ ++ G L +++ + MP
Sbjct: 590 CSLSECLRMGKE-----IHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPI- 643
Query: 442 PDAIGWATLLSSCRIHGN 459
D W T++ + +HGN
Sbjct: 644 KDVFSWNTMIFANGMHGN 661
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 235/455 (51%), Gaps = 46/455 (10%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNL--SRITFSTMLIMSSSRRCVDLGR 62
D V+WN L + + + G + V+ M GL + + +T S++L S + + G+
Sbjct: 105 DVVTWNSLSACYVNCGFPQQGLNVFRKM---GLNKVKANPLTVSSILPGCSDLQDLKSGK 161
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
+IHG +++ G VFV S V+ YAK + +A+ FD +P +
Sbjct: 162 EIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHR---------------- 205
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
D ++W ++ + + G ++ +++FREM L+G+ D T +L+
Sbjct: 206 ---------------DVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILS 250
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
AC L L+ GK IH F +++ +NVFV +ALV++Y C ++ A++VF M +NV++
Sbjct: 251 ACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVIT 310
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL 302
W ++ Y G ++ + +F M NG++PD + S++ +C+ L L+ G HG ++
Sbjct: 311 WNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAV 370
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
G++ + V ALV Y C + ++ +F+ M R+ V+W +L S Y G + ++
Sbjct: 371 KHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLN 430
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR--HYFEIMVKEYGIRPIHDHYTC--M 418
+F +M+ +G+KPD VT++ +L ACS ++ G+ H F + +G+ + D + C +
Sbjct: 431 VFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAV---RHGM--VEDVFVCNAL 485
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+ + ++ + EA+ + +P + W +L++
Sbjct: 486 LSLYAKCVCVREAQVVFDLIPH-REVASWNGILTA 519
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 126/497 (25%), Positives = 241/497 (48%), Gaps = 46/497 (9%)
Query: 19 HGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVF 78
HG N+A+K+Y G+ + + ++SR + + +Q H + G S V
Sbjct: 18 HGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKV-KQFHDDATRCGVMSDVS 76
Query: 79 VGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKD 138
+G+ + Y K VE +RR+F + +D
Sbjct: 77 IGNAFIHAYGKCKC-------------------------------VEGARRVFDDLVARD 105
Query: 139 SISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHA 198
++W ++ + G ++ +++FR+M L + + T S+L C L L+ GK+IH
Sbjct: 106 VVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHG 165
Query: 199 FIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEE 258
F++R+ ++VFV SA V+ Y KC ++ A++VF M ++VV+W ++ Y G ++
Sbjct: 166 FVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQK 225
Query: 259 AVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVT 318
+ +F M +G++PD T+ ++S+C++L L+ G HG +L G++ + VSNALV
Sbjct: 226 GLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVN 285
Query: 319 FYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVT 378
Y C + ++ +F+ M R+ ++W +L S Y G + +++F +M +G+KPD +
Sbjct: 286 LYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMA 345
Query: 379 LIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC--MIDILSRAGRLEEAKSFIN 436
+ +L ACS+ ++ G+ VK +G+ + D + C ++++ + + EA++ +
Sbjct: 346 MSSILPACSQLKDLKSGKTIHGFAVK-HGM--VEDVFVCTALVNLYANCLCVREAQTVFD 402
Query: 437 KMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYA------- 489
MP + + W + LSSC ++ + L+ P +LS ++A
Sbjct: 403 LMPH-RNVVTWNS-LSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDL 460
Query: 490 SKGKWDHVSQLRRTMRE 506
GK H +R M E
Sbjct: 461 KSGKVIHGFAVRHGMVE 477
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 256/717 (35%), Positives = 393/717 (54%), Gaps = 71/717 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN LISG++SHG +A+++Y+ L++ T S++L ++ V
Sbjct: 167 MPVRDLVSWNSLISGYSSHGYYEEALEIYH-ELRNSWIVPDSFTVSSVLPAFANLLVVKQ 225
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFD------------------- 101
G+ +HG LK G S V + L+ MY K DA+R FD
Sbjct: 226 GQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLK 285
Query: 102 -ELPEKNIVMY------------------------------NTMITGLLRRGLVEES--- 127
E+ E+++ M+ + +LR G V ES
Sbjct: 286 LEMVEESVKMFLENLDQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVK 345
Query: 128 ----------------RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLA 171
R +F M+ KD++SW ++I+G +Q+G EA+ LF+ M +
Sbjct: 346 NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
D T+ +++ L L+ GK +H+ I++ ++ V +AL+DMY KC + + +
Sbjct: 406 ADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKI 465
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASL 291
F +M + V+W ++ + G +++ M++N + PD T + CA+LA+
Sbjct: 466 FNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAK 525
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
G + H L G S + + NAL+ Y KCG +E S R+F M+ RD V+WT ++ Y
Sbjct: 526 RLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAY 585
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
+G+ + ++ F M G+ PD V I ++ ACS +GLVEKG FE M Y I P+
Sbjct: 586 GMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDPM 645
Query: 412 HDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL 471
+HY C++D+LSR+ ++ +A+ FI MP PDA WA++L +CR G++E + + ++
Sbjct: 646 IEHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRII 705
Query: 472 ELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADD 531
EL+P +P +L S+ YA+ KWD VS +R+++R+K ++K+PG SWI+ +VH+F + D
Sbjct: 706 ELNPDDPGYSILASNAYAALRKWDKVSLIRKSVRDKHIKKNPGYSWIEIGKKVHVFCSGD 765
Query: 532 WSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDV-ELSEKIKMLNHHSEKLAIAFGLL 590
S+P S+ I+ LE L M KEGY+PD V ++ E EK +++ HSE+LAIAFGLL
Sbjct: 766 DSAPQSEAIHKSLEILYSLMAKEGYIPDSREVSQNLEEEEEKRRLICGHSERLAIAFGLL 825
Query: 591 FIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
PG P++V+KNLRVCSDCH TK ISKI REILVRDA RFHLFK+G CSC D W
Sbjct: 826 NTEPGTPLQVMKNLRVCSDCHEVTKLISKIVGREILVRDANRFHLFKDGICSCKDRW 882
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 226/462 (48%), Gaps = 35/462 (7%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P + WN +I + +G A++ Y L++ + + TF +++ + ++G
Sbjct: 67 PAKNVYIWNSIIRAFSKNGWFPKALEFYG-KLRESKVSPDKYTFPSVIKACAGLFDAEMG 125
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
++ IL+ GF S ++VG+ LVDMY+++GL+ A++ FDE+P +++V +N++I+G
Sbjct: 126 DLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSH 185
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G E EA++++ E+R + D FT SVL
Sbjct: 186 GYYE-------------------------------EALEIYHELRNSWIVPDSFTVSSVL 214
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
A LL +++G+ +H F +++ V + L+ MY K A VF M ++ V
Sbjct: 215 PAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSV 274
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
++ M+ GY + EE+VK+F + +PD T+ SV+ +C +L L +
Sbjct: 275 TYNTMICGYLKLEMVEESVKMFLE-NLDQFKPDILTVTSVLCACGHLRDLSLAKYIYNYM 333
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
L G + TV N L+ Y KCG++ + +FN M +D VSW +++SGY + G E +
Sbjct: 334 LRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAM 393
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
LF+ M+ + D +T + ++S +R ++ G+ +K GI +ID+
Sbjct: 394 KLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKS-GIYIDLSVSNALIDM 452
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
++ G + ++ N M D + W T++S+C G+ G
Sbjct: 453 YAKCGEVGDSLKIFNSMG-TLDTVTWNTVISACVRFGDFATG 493
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 199/403 (49%), Gaps = 36/403 (8%)
Query: 51 MSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL-PEKNIV 109
+SSS +L R+IH ++ G F L+D Y+ + F + P KN+
Sbjct: 14 LSSSSNLNEL-RRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVY 72
Query: 110 MYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG 169
+ W ++I +NG +A++ + ++R
Sbjct: 73 I-------------------------------WNSIIRAFSKNGWFPKALEFYGKLRESK 101
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
++ D++TF SV+ AC GL E G ++ I+ + +++VG+ALVDMY + + A
Sbjct: 102 VSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRAR 161
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
VF M +++VSW +++ GY +G EEA++I+ ++ + I PD FT+ SV+ + ANL
Sbjct: 162 QVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLL 221
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
+++G HG +L +G+ S V+N L+ Y K D+ R+F+EM VRD V++ ++
Sbjct: 222 VVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMIC 281
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
GY K E++ +F + L KPD +T+ VL AC + ++ + M++ G
Sbjct: 282 GYLKLEMVEESVKMFLENLDQ-FKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRA-GFV 339
Query: 410 PIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ID+ ++ G + A+ N M D + W +++S
Sbjct: 340 LESTVKNILIDVYAKCGDMITARDVFNSMEC-KDTVSWNSIIS 381
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 152/291 (52%), Gaps = 7/291 (2%)
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA-WKNVVSWTAMLV 248
L E ++IHA +I + F L+D Y ++ + SVFR ++ KNV W +++
Sbjct: 20 LNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVYIWNSIIR 79
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
+ +NG +A++ + ++ + + PD +T SVI +CA L E G + + L G S
Sbjct: 80 AFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMGFES 139
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
+ V NALV Y + G + + ++F+EM VRD VSW +L+SGY+ G E ++++ ++
Sbjct: 140 DLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELR 199
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
+ + PD T+ VL A + +V++G+ +K G+ + ++ + + R
Sbjct: 200 NSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKS-GVNSVSVVNNGLLAMYLKFSRP 258
Query: 429 EEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLE-LDPYNP 478
+A+ ++M D++ + T++ + +E+ + + + LE LD + P
Sbjct: 259 TDARRVFDEM-VVRDSVTYNTMICG---YLKLEMVEESVKMFLENLDQFKP 305
>gi|224080790|ref|XP_002306231.1| predicted protein [Populus trichocarpa]
gi|222849195|gb|EEE86742.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/484 (45%), Positives = 322/484 (66%), Gaps = 5/484 (1%)
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M EG+ + FT+ ++LTA G+ E +HA I+ ++ + VG+AL+D Y K +
Sbjct: 1 MSREGIKPNDFTYSTILTAQPGVSPFE----MHAQAIKRNYVKSPSVGTALLDAYVKRGN 56
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A VF+ + K++V+W+AM+ GY Q G +E AV+IF M + I+P+++T +I++
Sbjct: 57 VDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINA 116
Query: 285 CAN-LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
CA A +E+G Q H S+ + + + VS+AL+T Y K G+IE + +F RD VS
Sbjct: 117 CAAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVS 176
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
W +++SGYA+ G + +++FE+M L+ D VT IGV+SAC+ GL +G+ YF+IMV
Sbjct: 177 WNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIMV 236
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
K++ I P +HY+CM+D+ RAG L +A IN+MPFP A W TLL++ IH N+E+G
Sbjct: 237 KDHHIEPRMEHYSCMVDLYGRAGMLVKAMEIINEMPFPASANVWRTLLAASCIHRNLEVG 296
Query: 464 KWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSR 523
K AA+ L+ L P NPASYVLL+++YAS G W +++R+ M EK V+K G SWI+ K++
Sbjct: 297 KLAADKLISLQPQNPASYVLLTNMYASVGNWKERAKVRKLMEEKKVKKVAGYSWIEVKNK 356
Query: 524 VHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKL 583
+ F A D S P S+QIYA+LE+L+ ++ GY PD S V DV+ K +L+ HSE+L
Sbjct: 357 TYTFLAGDVSHPLSNQIYAKLEELSCQLKGAGYQPDTSYVFQDVDEEHKEAILSQHSERL 416
Query: 584 AIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSC 643
AIAFGL+ PPG P+++VKNLRVC DCH+ K IS + R+I+VRD+ RFH FK G CSC
Sbjct: 417 AIAFGLIGTPPGTPLQIVKNLRVCGDCHSVIKLISILEGRDIVVRDSNRFHHFKGGLCSC 476
Query: 644 GDFW 647
GD+W
Sbjct: 477 GDYW 480
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 134/238 (56%), Gaps = 6/238 (2%)
Query: 105 EKNIVMYNTMITGLL----RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAID 160
++N V ++ T LL +RG V+E+ ++F+ +++KD ++W+ MI G Q G A+
Sbjct: 34 KRNYVKSPSVGTALLDAYVKRGNVDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVR 93
Query: 161 LFREMRLEGLAMDQFTFGSVLTACGGLLA-LEEGKQIHAFIIRNDHKDNVFVGSALVDMY 219
+F +M E + +++TF ++ AC A +E+GKQ+HA+ I++ + + V SAL+ MY
Sbjct: 94 IFVQMAKEKIKPNEYTFSGIINACAAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMY 153
Query: 220 CKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLG 279
K I+ A VF+ +++VSW +++ GY Q+G +A+++F MQR +E D T
Sbjct: 154 SKRGDIESAFEVFKRQRERDLVSWNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFI 213
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGLIS-FITVSNALVTFYGKCGNIEDSHRLFNEM 336
VIS+C + EG ++ + I + + +V YG+ G + + + NEM
Sbjct: 214 GVISACTHTGLANEGQRYFDIMVKDHHIEPRMEHYSCMVDLYGRAGMLVKAMEIINEM 271
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 115/248 (46%), Gaps = 35/248 (14%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRC-VDLGRQ 63
D V+W+ +I G+A G AV+++ M K+ + + TFS ++ ++ V+ G+Q
Sbjct: 71 DIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKI-KPNEYTFSGIINACAAPTAGVEQGKQ 129
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
+H +K F + + V S L+ MY+K G I A F E+++V +N++I
Sbjct: 130 LHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSII-------- 181
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
+G Q+G R+A+++F EM+ + L MD TF V++A
Sbjct: 182 -----------------------SGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISA 218
Query: 184 CGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
C EG++ ++++ H + + S +VD+Y + + A + M + +
Sbjct: 219 CTHTGLANEGQRYFDIMVKDHHIEPRMEHYSCMVDLYGRAGMLVKAMEIINEMPFPASAN 278
Query: 243 -WTAMLVG 249
W +L
Sbjct: 279 VWRTLLAA 286
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/607 (37%), Positives = 363/607 (59%), Gaps = 38/607 (6%)
Query: 48 MLIMSSSRR-CVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEK 106
+LI+S++RR + +H ++ GF F+ + L++M+++L + +A++ FD+ ++
Sbjct: 74 LLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKR 133
Query: 107 NIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR 166
I ++N + L G RG + ++L+ M
Sbjct: 134 TIYVWNALFRALALAG---------RG----------------------NDVLELYPRMN 162
Query: 167 LEGLAMDQFTFGSVLTACGG----LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC 222
+ G++ D+FT+ +L AC + L++GK+IHA I+R+ + +V V + L+DMY +
Sbjct: 163 MMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARF 222
Query: 223 KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE--PDDFTLGS 280
+ YA +VF M KNVVSW+AM+ Y +NG EA+++F M N + P+ T+ S
Sbjct: 223 GCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVS 282
Query: 281 VISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD 340
V+ +CA A+LE+G H L GL S + V +AL+T Y +CG +E +F+ M+ +D
Sbjct: 283 VLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKD 342
Query: 341 EVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
V W +L+S Y G + I +FE+M+ HG P ++ I VL ACS GLVE+G+ FE
Sbjct: 343 VVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFE 402
Query: 401 IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
MVKE+GI+P +HY CM+D+L RA RL+EA I + P W +LL +CRIH +V
Sbjct: 403 SMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHV 462
Query: 461 EIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKY 520
E+ + A++ L +L+P N +YVLL+ IYA WD V ++++ + + ++K PG SWI+
Sbjct: 463 ELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEV 522
Query: 521 KSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHS 580
+ +++ F++ D +P +Q++A L L+ +M + GY P VL+D++ EK +++ HS
Sbjct: 523 RRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHS 582
Query: 581 EKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGE 640
EKLA+AFGL+ G IR+ KNLR+C DCH+ TK+ISK REI+VRD RFH FK+G
Sbjct: 583 EKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGV 642
Query: 641 CSCGDFW 647
CSCGD+W
Sbjct: 643 CSCGDYW 649
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 165/337 (48%), Gaps = 39/337 (11%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCV----DLGRQI 64
WN L A G ND +++Y M G+ + R T++ +L + C+ G++I
Sbjct: 138 WNALFRALALAGRGNDVLELYPRMNMMGVSS-DRFTYTYLLKACVASECLVSFLQKGKEI 196
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H HIL+ G+G++V V + L+DMYA+ G + A FDE+P KN+V ++ MI +
Sbjct: 197 HAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAK---- 252
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL--EGLAMDQFTFGSVLT 182
NG EA++LFREM L + T SVL
Sbjct: 253 ---------------------------NGKPYEALELFREMMLNTHDSVPNSVTMVSVLQ 285
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
AC ALE+GK IHA+I+R + V SAL+ MY +C ++ + +F M K+VV
Sbjct: 286 ACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVL 345
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHGRS 301
W +++ YG +G +A+KIF M +G P + SV+ +C++ +EEG + F
Sbjct: 346 WNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMV 405
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
G+ + +V G+ ++++ ++ ++ +
Sbjct: 406 KEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRI 442
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 102/205 (49%), Gaps = 36/205 (17%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLML---KDGLGNLSRITFSTMLIMSSSRRC 57
MP + VSW+ +I+ +A +G +A++++ M+ D + N +T ++L ++
Sbjct: 235 MPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPN--SVTMVSVLQACAAFAA 292
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
++ G+ IH +IL+ G S + V S L+ MYA+ G + + FD + +K++V++N++I+
Sbjct: 293 LEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISS 352
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
GL +G R+AI +F EM G + +F
Sbjct: 353 Y---GL----------------------------HGYGRKAIKIFEEMIDHGFSPSHISF 381
Query: 178 GSVLTACGGLLALEEGKQIHAFIIR 202
SVL AC +EEGK++ +++
Sbjct: 382 ISVLGACSHTGLVEEGKKLFESMVK 406
>gi|356570490|ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Glycine max]
Length = 582
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/602 (39%), Positives = 346/602 (57%), Gaps = 34/602 (5%)
Query: 48 MLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKN 107
+L+ + R + G Q+HG ++K GF + V L++ Y+K L + + + FD P K+
Sbjct: 13 VLVWFTHTRSLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPHKS 72
Query: 108 IVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL 167
+ +W+++I+ QN L A+ FR M
Sbjct: 73 -------------------------------ATTWSSVISSFAQNDLPLPALRFFRRMLR 101
Query: 168 EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY 227
GL D T + + L +L +HA ++ H +VFVGS+LVD Y KC +
Sbjct: 102 HGLLPDDHTLPTAAKSVAALSSLPLALSLHALSLKTAHHHDVFVGSSLVDTYAKCGDVNL 161
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM--QRNGIEPDDFTLGSVISSC 285
A VF M KNVVSW+ M+ GY Q G EEA+ +F Q I +DFTL SV+ C
Sbjct: 162 ARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNLFKRALEQDYDIRVNDFTLSSVLRVC 221
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
+ E G Q HG T S V+++L++ Y KCG +E +++F E+ VR+ W
Sbjct: 222 SASTLFELGKQVHGLCFKTSFDSSCFVASSLISLYSKCGVVEGGYKVFEEVKVRNLGMWN 281
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE 405
A++ A+ T +LFE+M G+KP+ +T + +L ACS AGLVEKG H F +M KE
Sbjct: 282 AMLIACAQHAHTGRTFELFEEMERVGVKPNFITFLCLLYACSHAGLVEKGEHCFGLM-KE 340
Query: 406 YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKW 465
+GI P HY ++D+L RAG+LEEA I +MP P W LL+ CRIHGN E+ +
Sbjct: 341 HGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPMQPTESVWGALLTGCRIHGNTELASF 400
Query: 466 AAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVH 525
A+ + E+ + VLLS+ YA+ G+W+ ++ R+ MR++G++K+ G SW++ +RVH
Sbjct: 401 VADKVFEMGAVSSGIQVLLSNAYAAAGRWEEAARARKMMRDQGIKKETGLSWVEEGNRVH 460
Query: 526 IFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAI 585
F+A D S + +IY +LE+L +M K GYV D S VL +V+ EK + + +HSE+LAI
Sbjct: 461 TFAAGDRSHGKTREIYEKLEELGEEMAKAGYVADTSFVLKEVDGDEKSQTIRYHSERLAI 520
Query: 586 AFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGD 645
AFGL+ PP PIRV+KNLRVC DCH A K+ISK T R I+VRD RFH F++G+C+CGD
Sbjct: 521 AFGLITFPPEWPIRVMKNLRVCGDCHTAIKFISKCTGRVIIVRDNNRFHRFEDGKCTCGD 580
Query: 646 FW 647
+W
Sbjct: 581 YW 582
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 180/412 (43%), Gaps = 37/412 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
P +W+ +IS A + A++ + ML+ GL T T ++ + L
Sbjct: 68 FPHKSATTWSSVISSFAQNDLPLPALRFFRRMLRHGLLPDDH-TLPTAAKSVAALSSLPL 126
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+H LK VFVGS LVD YAK G + A++ FDE+P KN+V ++ MI G +
Sbjct: 127 ALSLHALSLKTAHHHDVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQ 186
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL EE+ LF+ ++D + ++ FT SV
Sbjct: 187 MGLDEEALNLFKRALEQDY-----------------------------DIRVNDFTLSSV 217
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C E GKQ+H + + FV S+L+ +Y KC ++ VF + +N+
Sbjct: 218 LRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSLISLYSKCGVVEGGYKVFEEVKVRNL 277
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
W AML+ Q+ + ++F M+R G++P+ T ++ +C++ +E+G G
Sbjct: 278 GMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNFITFLCLLYACSHAGLVEKGEHCFGL 337
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKANE 359
G+ LV G+ G +E++ + EM ++ E W AL++G G
Sbjct: 338 MKEHGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPMQPTESVWGALLTGCRIHGNTEL 397
Query: 360 TIDLFEKMLSHGLKPD--EVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
+ +K+ G +V L +A R + R M+++ GI+
Sbjct: 398 ASFVADKVFEMGAVSSGIQVLLSNAYAAAGRWEEAARARK----MMRDQGIK 445
>gi|108864632|gb|ABG22571.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 244/618 (39%), Positives = 346/618 (55%), Gaps = 62/618 (10%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
R +H ILK G + + LV YAK L+ DA FDE P ++I +Y++++T +
Sbjct: 105 RGMHARILKEGLAHHPPNPAALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHS 164
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
E + + R M D+ L D F SV
Sbjct: 165 ASPELALPILRCMLSADA------------------------------LHPDHFVISSVA 194
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+ L + G+Q+HA + + + + V S+LVDMYCKC S VF +M+ KN V
Sbjct: 195 SVFARLRSRRLGRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVFDSMSAKNSV 254
Query: 242 SWTAMLVGYGQNGCSEEA-------------------------------VKIFCNMQRNG 270
WTA++ GY NG SEEA V++F M+R+G
Sbjct: 255 VWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRRDG 314
Query: 271 IEPDD-FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
+ DD F L VI A+LA+ G Q HG ++ G +S + V NAL+ Y KC +I +
Sbjct: 315 VRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYSKCSDILSA 374
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
+F + RD +SWT +V G A+ G+A E + L+++M+ G KP+EVT +G++ ACS A
Sbjct: 375 REVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHA 434
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
GLV+KGR FE M EYGI P HYTC +D+LSR+G L EA+ + MP+ PD W
Sbjct: 435 GLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYEPDEATWGA 494
Query: 450 LLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
LLS+C + + E+ ++ LLEL P + ++Y+LLS++YA GKWD V+++R+ M +
Sbjct: 495 LLSACTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWDSVAKVRKCMIGLEI 554
Query: 510 RKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVEL 569
RK+PG SWI+ +F A + ++I LE++ +M K GYVPD SSV+HD+E
Sbjct: 555 RKEPGYSWIEAGREFRLFHAGEVPLDVREEIMVFLEEMVLEMRKRGYVPDTSSVMHDLEE 614
Query: 570 SEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRD 629
SEK L HSE+LA+AFGL+ PPG IRVVKNLRVC DCH K IS+IT R+I+VRD
Sbjct: 615 SEKEHHLFLHSERLAVAFGLIKSPPGSVIRVVKNLRVCVDCHTVMKLISEITHRKIVVRD 674
Query: 630 AVRFHLFKNGECSCGDFW 647
+ RFH F+ G+CSC +FW
Sbjct: 675 SSRFHHFEGGKCSCSEFW 692
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 196/386 (50%), Gaps = 5/386 (1%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P D ++ L++ + S A+ + ML + S++ + + R LG
Sbjct: 147 PRRDIYIYSSLLTAVSHSASPELALPILRCMLSADALHPDHFVISSVASVFARLRSRRLG 206
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
RQ+H H + + V S LVDMY K G D ++ FD + KN V++ +++G
Sbjct: 207 RQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVFDSMSAKNSVVWTALVSGYASN 266
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ-FTFGSV 180
G EE+ +LFR M ++ +WT +I+GL+ G A++LF EMR +G+ +D F V
Sbjct: 267 GRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRRDGVRIDDAFVLSIV 326
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ L A G+Q+H +R N+ VG+AL+DMY KC I A VF + +++V
Sbjct: 327 IGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYSKCSDILSAREVFEGITFRDV 386
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
+SWT M+VG Q+G +EEA+ ++ M G +P++ T +I +C++ +++G Q F
Sbjct: 387 ISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFES 446
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKAN 358
G+ + + + G++ ++ L M DE +W AL+S K+ A
Sbjct: 447 MKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYEPDEATWGALLSACTKYKDAE 506
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLS 384
I + +K+L L+P + + +LS
Sbjct: 507 MCIRISDKLLE--LRPKDSSTYILLS 530
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 8/200 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +W LISG + G AV+++ M +DG+ S ++ S+ L
Sbjct: 279 MPGRNLFAWTALISGLVNTGESVGAVELFVEMRRDGVRIDDAFVLSIVIGGSADLAAFVL 338
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+HG ++ GF S + VG+ L+DMY+K I A+ F+ + ++++ + TM+ G +
Sbjct: 339 GRQLHGSTMRLGFLSNMIVGNALIDMYSKCSDILSAREVFEGITFRDVISWTTMVVGEAQ 398
Query: 121 RGLVEESRRLFRGM----KDKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GLA--MD 173
G EE+ L+ M + +++ +I GL ++ LF M+ E G+ +
Sbjct: 399 HGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQ 458
Query: 174 QFT-FGSVLTACGGLLALEE 192
+T + +L+ G LL EE
Sbjct: 459 HYTCYLDLLSRSGHLLEAEE 478
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 243/647 (37%), Positives = 370/647 (57%), Gaps = 38/647 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW L+ G+ G+ ++ + M G+ + TFST L + V+ G QIHG
Sbjct: 71 VSWTALMCGYLQEGNAKGSLALLCEMGYSGV-KPNEFTFSTSLKACGALGVVENGMQIHG 129
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+K GF VG+ +DMY+K G I A++ F+++P +N+V
Sbjct: 130 MCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLV----------------- 172
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
SW MI G G R+++ LF+ M+ +G D+FTF S L ACG
Sbjct: 173 --------------SWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGA 218
Query: 187 LLALEEGKQIHAFIIRNDHKDNV--FVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L A+ G QIHA +I ++ + SA+VD+Y KC + A+ VF + KN++SW+
Sbjct: 219 LGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWS 278
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
A++ G+ Q G EA+ +F ++ + D F L ++ A+LA +E+G Q H L
Sbjct: 279 ALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKV 338
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
I+V+N+++ Y KCG E++ RLF+EM VR+ VSWT +++GY K G + I LF
Sbjct: 339 PSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLF 398
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+M G++ DEV + +LSACS +GL+ + + YF + + ++P +HY CM+DIL R
Sbjct: 399 NRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGR 458
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG+L+EAK+ I M P+ W TLLS+CR+HGN+EIG+ E L +D NP +YV++
Sbjct: 459 AGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMM 518
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S+IYA G W ++R+ ++ KG++K+ G SW++ +H F D + P +++I+ L
Sbjct: 519 SNIYAEAGYWKECERVRKLVKAKGLKKEAGQSWVEINKEIHFFYGGDDTHPLTEKIHEML 578
Query: 545 EKLNRKMIKE-GYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLL---FIPPGLPIRV 600
+++ R++ +E GY + LHDVE K + L HSEKLAI L+ G IRV
Sbjct: 579 KEMERRVKEEVGYAYGLRFALHDVEEESKEENLRVHSEKLAIGLALVCDGMEKKGGVIRV 638
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCH K +SKI ++ +VRDA RFH F++G CSCGD+W
Sbjct: 639 FKNLRVCGDCHEFIKGLSKILKKVFVVRDANRFHRFEDGLCSCGDYW 685
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 119/419 (28%), Positives = 203/419 (48%), Gaps = 35/419 (8%)
Query: 42 RITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFD 101
R + +L S D G Q+H + GFG + + + L+DMY K + A FD
Sbjct: 4 RQRLAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFD 63
Query: 102 ELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDL 161
+ E+N+V SWT ++ G +Q G + ++ L
Sbjct: 64 RMLERNVV-------------------------------SWTALMCGYLQEGNAKGSLAL 92
Query: 162 FREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK 221
EM G+ ++FTF + L ACG L +E G QIH +++ + VG+A +DMY K
Sbjct: 93 LCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSK 152
Query: 222 CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
C I AE VF M ++N+VSW AM+ G+ G +++ +F MQ G PD+FT S
Sbjct: 153 CGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTST 212
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLISFI--TVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
+ +C L ++ GTQ H + G I +++A+V Y KCG + ++ ++F+ + +
Sbjct: 213 LKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQK 272
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
+ +SW+AL+ G+A+ G E +DLF ++ D L ++ + LVE+G+
Sbjct: 273 NLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMH 332
Query: 400 EIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
++K I + +ID+ + G EEA+ ++M + + W +++ HG
Sbjct: 333 CYILKVPSGLDISVANS-IIDMYLKCGLTEEAERLFSEMQV-RNVVSWTVMITGYGKHG 389
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 207/435 (47%), Gaps = 71/435 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNL-SRITFSTMLIMSSSRRCVD 59
MPF + VSWN +I+GH G+ ++ ++ M G G + TF++ L + +
Sbjct: 166 MPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRM--QGQGEVPDEFTFTSTLKACGALGAIR 223
Query: 60 LGRQIHGHILKFGFGSYV--FVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
G QIH ++ GF + + S +VD+YAK G +++A++ FD + +KN++ ++ +I G
Sbjct: 224 GGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQG 283
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
+ G + EA+DLFR++R +D F
Sbjct: 284 FAQEGNL-------------------------------LEAMDLFRQLRESVSNVDGFVL 312
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
++ L +E+GKQ+H +I++ ++ V ++++DMY KC + AE +F M
Sbjct: 313 SIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQV 372
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
+NVVSWT M+ GYG++G E+A+ +F MQ +GIE D+ +++S+C++ + E ++
Sbjct: 373 RNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEY 432
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
R L + NIE + +V + G+
Sbjct: 433 FSR---------------LCNNHQMKPNIE---------------HYACMVDILGRAGQL 462
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
E +L E M LKP+E +LSAC G +E GR EI+ + P+ +Y
Sbjct: 463 KEAKNLIENM---KLKPNEGIWQTLLSACRVHGNLEIGREVGEILFRMDTDNPV--NYVM 517
Query: 418 MIDILSRAGRLEEAK 432
M +I + AG +E +
Sbjct: 518 MSNIYAEAGYWKECE 532
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 150/285 (52%), Gaps = 2/285 (0%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
+L C ++G Q+HA + ++ + + L+DMY KC + A SVF M
Sbjct: 7 LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
+NVVSWTA++ GY Q G ++ ++ + C M +G++P++FT + + +C L +E G Q
Sbjct: 67 ERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQ 126
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
HG + +G V NA + Y KCG I + ++FN+M R+ VSW A+++G+ G
Sbjct: 127 IHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGN 186
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH-YFEIMVKEYGIRPIHDHY 415
+++ LF++M G PDE T L AC G + G + ++ + + I +
Sbjct: 187 GRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIA 246
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
+ ++D+ ++ G L EA+ +++ + I W+ L+ GN+
Sbjct: 247 SAIVDLYAKCGYLFEAQKVFDRIE-QKNLISWSALIQGFAQEGNL 290
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD- 59
M + VSW ++I+G+ HG A+ ++N M DG+ L + + +L S +
Sbjct: 370 MQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGI-ELDEVAYLALLSACSHSGLIRE 428
Query: 60 ----LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEK-NIVMYNTM 114
R + H +K Y + +VD+ + G + +AK + + K N ++ T+
Sbjct: 429 SQEYFSRLCNNHQMKPNIEHY----ACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTL 484
Query: 115 ITGLLRRGLVEESRR----LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL 170
++ G +E R LFR M + +++ M + G +E + + ++ +GL
Sbjct: 485 LSACRVHGNLEIGREVGEILFR-MDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGL 543
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 251/653 (38%), Positives = 383/653 (58%), Gaps = 41/653 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGL--GNLSRITFSTMLIMSSSRRCV 58
MP D VSWN +ISG + +AV ++ M ++G+ N S I+ L SS +
Sbjct: 517 MPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVIS---TLSSCSSLGWL 573
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
LGRQIHG K+G V V + L+ +YA+ I + ++ F ++P
Sbjct: 574 TLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMP-------------- 619
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQ-NGLEREAIDLFREMRLEGLAMDQFTF 177
+ D +SW + I L + +A+ F EM G ++ TF
Sbjct: 620 -----------------EYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTF 662
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA- 236
++L A L G QIHA I++ D+ + +AL+ Y KC+ ++ E +F M+
Sbjct: 663 INILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSE 722
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
++ VSW +M+ GY +G +A+ + M + G + D FT +V+S+CA++A+LE G +
Sbjct: 723 RRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGME 782
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H ++ L S + V +ALV Y KCG I+ + R F M VR+ SW +++SGYA+ G
Sbjct: 783 VHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGH 842
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
+ + +F +M HG PD VT +GVLSACS GLV++G +F+ M + YG+ P +H++
Sbjct: 843 GQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFS 902
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS-CRIHG-NVEIGKWAAESLLELD 474
CM+D+L RAG +++ + FI MP P+ + W T+L + CR +G N E+G+ AA+ L+EL+
Sbjct: 903 CMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELE 962
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS 534
P N +YVLLS+++A+ G W+ V + R MR+ V+KD GCSW+ K VH+F A D +
Sbjct: 963 PQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTH 1022
Query: 535 PYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPP 594
P ++IY +L++L K+ GYVP+ L+D+EL K ++L++HSEKLAIAF +L
Sbjct: 1023 PEKEKIYEKLKELMNKIRDAGYVPETKYALYDLELENKEELLSYHSEKLAIAF-VLTRKS 1081
Query: 595 GLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LPIR++KNLRVC DCH A KYISKI R+I++RD+ RFH F G CSCGD+W
Sbjct: 1082 ELPIRIMKNLRVCGDCHTAFKYISKIVGRQIILRDSNRFHHFGGGMCSCGDYW 1134
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/459 (28%), Positives = 238/459 (51%), Gaps = 36/459 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLG-NLSRITFSTMLIMSSSRRCVD 59
+ F + V+WN +IS + G A K++++M +G+ NL ++ +++++ D
Sbjct: 305 IKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLAD 364
Query: 60 LG----RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
G Q+ I K GF ++VGS LV+ +A+ GL+ AK F ++ ++N V N ++
Sbjct: 365 CGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLM 424
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
GL R+ EE+ ++F+ MKD I+ +++ + + F
Sbjct: 425 VGLARQHQGEEAAKVFKEMKDLVEINSESLV-----------------------VLLSTF 461
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIKYAESVFRT 234
T S L +G+++HA++ R+ D + +G+ALV+MY KC +I A SVF+
Sbjct: 462 TEFSNLKE-----GKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQL 516
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
M K+ VSW +M+ G N EEAV F M+RNG+ P +F++ S +SSC++L L G
Sbjct: 517 MPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLG 576
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
Q HG GL ++VSNAL+T Y + +I + ++F +M D+VSW + + AK+
Sbjct: 577 RQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKY 636
Query: 355 -GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
+ + F +M+ G +P+ VT I +L+A S ++ G H ++ +Y + +
Sbjct: 637 EASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLG-HQIHALILKYSVADDNA 695
Query: 414 HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
++ + ++E+ + ++M D + W +++S
Sbjct: 696 IENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMIS 734
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 216/465 (46%), Gaps = 48/465 (10%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSR---ITFSTMLIMSSSRRCVDLG 61
+ V+ N L+ G A +A KV+ M KD + S + ST S+ + G
Sbjct: 416 NAVTMNGLMVGLARQHQGEEAAKVFKEM-KDLVEINSESLVVLLSTFTEFSNLKEGKRKG 474
Query: 62 RQIHGHILKFGF-GSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+++H ++ + G + + +G+ LV+MY K I +A F +P K
Sbjct: 475 QEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSK-------------- 520
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
D++SW +MI+GL N EA+ F M+ G+ F+ S
Sbjct: 521 -----------------DTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVIST 563
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L++C L L G+QIH + +V V +AL+ +Y + SI + VF M +
Sbjct: 564 LSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQ 623
Query: 241 VSWTAMLVGYGQNGCSE-EAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VSW + + + S +A+K F M + G P+ T +++++ ++ + L G Q H
Sbjct: 624 VSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHA 683
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALVSGYAKFGKAN 358
L + + NAL+ FYGKC +ED +F+ M+ RDEVSW +++SGY G +
Sbjct: 684 LILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILH 743
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--- 415
+ +DL M+ G K D T VLSAC+ +E+G + V +R +
Sbjct: 744 KAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERG-----MEVHACAVRACLESDVVV 798
Query: 416 -TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+ ++D+ ++ G+++ A F MP + W +++S HG+
Sbjct: 799 GSALVDMYAKCGKIDYASRFFELMPV-RNIYSWNSMISGYARHGH 842
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/472 (26%), Positives = 229/472 (48%), Gaps = 59/472 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRC--- 57
MP + VSW+ LISG+ + ++A ++ ++ G L F+ + + ++C
Sbjct: 201 MPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSG---LLPNHFAVGSALRACQQCGST 257
Query: 58 -VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKL-GLIYDAKRGFDELPEKNIVMYNTMI 115
+ LG QIH I K S + + + L+ MY+ G I DA R FDE+ +N V +N++I
Sbjct: 258 GIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSII 317
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM--- 172
+ RRG D++S A LF M++EG+ +
Sbjct: 318 SVYCRRG---------------DAVS----------------AFKLFSVMQMEGVELNLR 346
Query: 173 -DQFTFGSVLT-ACG----GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIK 226
+++T S++T AC GL+ LE Q+ I ++ +++VGSALV+ + + +
Sbjct: 347 PNEYTLCSLVTAACSLADCGLVLLE---QMLTRIEKSGFLRDLYVGSALVNGFARYGLMD 403
Query: 227 YAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCA 286
A+ +F+ M +N V+ ++VG + EEA K+F M ++ +E + +L ++S+
Sbjct: 404 CAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM-KDLVEINSESLVVLLSTFT 462
Query: 287 NLASLEE----GTQFHGRSLVTGLI-SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE 341
++L+E G + H +GL+ + I++ NALV YGKC I+++ +F M +D
Sbjct: 463 EFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDT 522
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEI 401
VSW +++SG + E + F M +G+ P ++I LS+CS G + GR
Sbjct: 523 VSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGE 582
Query: 402 MVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
K +G+ ++ + + + E + +MP D + W + + +
Sbjct: 583 GFK-WGLDLDVSVSNALLTLYAETDSINECQKVFFQMP-EYDQVSWNSFIGA 632
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/451 (25%), Positives = 200/451 (44%), Gaps = 79/451 (17%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+H + K GF VF + L+++Y ++G + A++ FDE+P+KN+V ++ +I+G
Sbjct: 159 ANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISG--- 215
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
QN + EA LF+ + GL + F GS
Sbjct: 216 ----------------------------YTQNRMPDEACSLFKGVISSGLLPNHFAVGSA 247
Query: 181 LTACG--GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK-SIKYAESVFRTMAW 237
L AC G ++ G QIHAFI + ++ + + L+ MY C SI A VF + +
Sbjct: 248 LRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKF 307
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE----PDDFTLGSVISSCANLAS--L 291
+N V+W +++ Y + G + A K+F MQ G+E P+++TL S++++ +LA L
Sbjct: 308 RNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGL 367
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
Q R +G + + V +ALV + + G ++ + +F +M R+ V+ L+ G
Sbjct: 368 VLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGL 427
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS--------------------RAGL 391
A+ + E +F++M ++ + +L+ +LS + R+GL
Sbjct: 428 ARQHQGEEAAKVFKEM-KDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGL 486
Query: 392 VEKGRHYFEIMVKEYG-------------IRPIHD--HYTCMIDILSRAGRLEEAKSFIN 436
V+ +V YG + P D + MI L R EEA S +
Sbjct: 487 VDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFH 546
Query: 437 KMP---FPPDAIGWATLLSSCRIHGNVEIGK 464
M P + LSSC G + +G+
Sbjct: 547 TMKRNGMVPSNFSVISTLSSCSSLGWLTLGR 577
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 160/315 (50%), Gaps = 21/315 (6%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
+L + +H + + D+VF + L+++Y + ++ A +F M KN+VSW+ ++
Sbjct: 155 SLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLIS 214
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS--LEEGTQFHGRSLVTGL 306
GY QN +EA +F + +G+ P+ F +GS + +C S ++ G Q H
Sbjct: 215 GYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPC 274
Query: 307 ISFITVSNALVTFYGKC-GNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
+S + +SN L++ Y C G+I+D+HR+F+E+ R+ V+W +++S Y + G A LF
Sbjct: 275 VSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFS 334
Query: 366 KMLSHG----LKPDEVTLIG-VLSACSRAGLVEKGRHYFEIM---VKEYGIRPIHDHY-- 415
M G L+P+E TL V +ACS L + G E M +++ G + D Y
Sbjct: 335 VMQMEGVELNLRPNEYTLCSLVTAACS---LADCGLVLLEQMLTRIEKSGF--LRDLYVG 389
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS-CRIHGNVEIGKWAAESLLELD 474
+ +++ +R G ++ AK +M + +A+ L+ R H E K E + +L
Sbjct: 390 SALVNGFARYGLMDCAKMIFKQM-YDRNAVTMNGLMVGLARQHQGEEAAKVFKE-MKDLV 447
Query: 475 PYNPASYVLLSSIYA 489
N S V+L S +
Sbjct: 448 EINSESLVVLLSTFT 462
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%)
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
+SL + H + TG + N L+ Y + GN+ + +LF+EM ++ VSW+ L+
Sbjct: 154 SSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLI 213
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
SGY + +E LF+ ++S GL P+ + L AC + G
Sbjct: 214 SGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCG 255
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 245/682 (35%), Positives = 359/682 (52%), Gaps = 67/682 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D + + LIS + G N+A+++Y + G+ + + F T+ +
Sbjct: 92 IPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSV-FLTVAKACGASGDASR 150
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+++H ++ G S F+G+ L+ Y K
Sbjct: 151 VKEVHDDAIRCGMMSDAFLGNALIHAYGKCKC---------------------------- 182
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
VE +RR+F + KD +SWT+M + + GL R + +F EM G+ + T S+
Sbjct: 183 ---VEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSI 239
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L L+ G+ IH F +R+ +NVFV SALV +Y +C S+K A VF M ++V
Sbjct: 240 LPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDV 299
Query: 241 VSWTAMLVGY-----------------------------------GQNGCSEEAVKIFCN 265
VSW +L Y +NG +E+AV++
Sbjct: 300 VSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRK 359
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
MQ G +P+ T+ S + +C+ L SL G + H LI +T ALV Y KCG+
Sbjct: 360 MQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGD 419
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+ S +F+ + +D V+W ++ A G E + LFE ML G+KP+ VT GVLS
Sbjct: 420 LNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSG 479
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
CS + LVE+G F M +++ + P +HY CM+D+ SRAGRL EA FI +MP P A
Sbjct: 480 CSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTAS 539
Query: 446 GWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
W LL +CR++ NVE+ K +A L E++P NP +YV L +I + W S+ R M+
Sbjct: 540 AWGALLGACRVYKNVELAKISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILMK 599
Query: 506 EKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLH 565
E+G+ K PGCSW++ RVH F D ++ SD+IY L++L KM GY PD VL
Sbjct: 600 ERGITKTPGCSWLQVGDRVHTFVVGDKNNMESDKIYNFLDELGEKMKSAGYKPDTDYVLQ 659
Query: 566 DVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREI 625
D++ EK + L HSEKLA+AFG+L + IRV KNLR+C DCHNA KY+SK+ I
Sbjct: 660 DIDQEEKAESLCSHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYVSKVVGVTI 719
Query: 626 LVRDAVRFHLFKNGECSCGDFW 647
+VRD++RFH F+NG CSC D W
Sbjct: 720 IVRDSLRFHHFRNGNCSCQDLW 741
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 152/297 (51%), Gaps = 1/297 (0%)
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
++ L G +++LF + D + +T+I+ GL EAI L+ +R G+
Sbjct: 72 LLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPH 131
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
F +V ACG K++H IR + F+G+AL+ Y KCK ++ A VF
Sbjct: 132 NSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFD 191
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE 293
+ K+VVSWT+M Y G + +FC M NG++P+ TL S++ +C+ L L+
Sbjct: 192 DLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKS 251
Query: 294 GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK 353
G HG ++ G+I + V +ALV+ Y +C +++ + +F+ M RD VSW +++ Y
Sbjct: 252 GRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFT 311
Query: 354 FGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP 410
+ ++ + LF +M S G++ DE T V+ C G EK M + G +P
Sbjct: 312 NREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKM-QNLGFKP 367
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 121/230 (52%), Gaps = 6/230 (2%)
Query: 226 KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
+ A+ +F + + + + ++ + G EA++++ +++ GI+P + +V +C
Sbjct: 83 RRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAKAC 142
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
+ H ++ G++S + NAL+ YGKC +E + R+F+++ V+D VSWT
Sbjct: 143 GASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWT 202
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE 405
++ S Y G + +F +M +G+KP+ VTL +L ACS ++ GR V+
Sbjct: 203 SMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVR- 261
Query: 406 YGIRPIHDHYTC--MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+G+ I + + C ++ + +R +++A+ + MP D + W +L++
Sbjct: 262 HGM--IENVFVCSALVSLYARCLSVKQARLVFDLMPH-RDVVSWNGVLTA 308
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 243/680 (35%), Positives = 369/680 (54%), Gaps = 64/680 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + +WN LI +AS ++ + M+ + ++ TF ++ ++ + L
Sbjct: 90 IPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSL 149
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +HG +K GS VFV + L+ Y G +
Sbjct: 150 GQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDL--------------------------- 182
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ + ++F +K+KD +SW +MI G +Q G +A++LF++M E + T V
Sbjct: 183 ----DSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGV 238
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+AC + LE G+Q+ ++I N N+ + +A++DMY KC SI+ A+ +F M K+
Sbjct: 239 LSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDN 298
Query: 241 VSWTAMLVGYG-------------------------------QNGCSEEAVKIFCNMQ-R 268
V+WT ML GY QNG EA+ +F +Q +
Sbjct: 299 VTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQ 358
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIED 328
++ + TL S +S+CA + +LE G H G+ V++AL+ Y KCG++E
Sbjct: 359 KNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEK 418
Query: 329 SHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
S +FN + RD W+A++ G A G NE +D+F KM +KP+ VT V ACS
Sbjct: 419 SREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSH 478
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
GLV++ F M YGI P HY C++D+L R+G LE+A FI MP PP W
Sbjct: 479 TGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWG 538
Query: 449 TLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
LL +C+IH N+ + + A LLEL+P N ++VLLS+IYA GKW++VS+LR+ MR G
Sbjct: 539 ALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTG 598
Query: 509 VRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVE 568
++K+PGCS I+ +H F + D + P S+++Y +L ++ K+ GY P++S VL +E
Sbjct: 599 LKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIE 658
Query: 569 LSE-KIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILV 627
E K + LN HSEKLAI +GL+ IRV+KNLRVC DCH+ K IS++ REI+V
Sbjct: 659 EEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIV 718
Query: 628 RDAVRFHLFKNGECSCGDFW 647
RD RFH F+NG+CSC DFW
Sbjct: 719 RDRYRFHHFRNGQCSCNDFW 738
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/441 (26%), Positives = 208/441 (47%), Gaps = 70/441 (15%)
Query: 55 RRCVDLG--RQIHGHILKFGFGSYVFVGSPLVDMYA--KLGLIYDAKRGFDELPEKNIVM 110
RCV L +Q HGH+++ G S + S L M A + A++ FDE+P+ N
Sbjct: 38 ERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPN--- 94
Query: 111 YNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL 170
S +W T+I +I F +M E
Sbjct: 95 ----------------------------SFAWNTLIRAYASGPDPVLSIWAFLDMVSESQ 126
Query: 171 AM-DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
+++TF ++ A + +L G+ +H +++ +VFV ++L+ Y C + A
Sbjct: 127 CYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSAC 186
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
VF T+ K+VVSW +M+ G+ Q G ++A+++F M+ ++ T+ V+S+CA +
Sbjct: 187 KVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIR 246
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT---- 345
+LE G Q + +T++NA++ Y KCG+IED+ RLF+ M +D V+WT
Sbjct: 247 NLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLD 306
Query: 346 ---------------------------ALVSGYAKFGKANETIDLFEKM-LSHGLKPDEV 377
AL+S Y + GK NE + +F ++ L +K +++
Sbjct: 307 GYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQI 366
Query: 378 TLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINK 437
TL+ LSAC++ G +E GR + +K++GIR + +I + S+ G LE+++ N
Sbjct: 367 TLVSTLSACAQVGALELGR-WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNS 425
Query: 438 MPFPPDAIGWATLLSSCRIHG 458
+ D W+ ++ +HG
Sbjct: 426 VE-KRDVFVWSAMIGGLAMHG 445
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 161/327 (49%), Gaps = 14/327 (4%)
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYC--KCKSIKYAESVFRTMAWKNVVSWTA 245
++L + KQ H +IR + + S L M S++YA VF + N +W
Sbjct: 41 VSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNT 100
Query: 246 MLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++ Y ++ F +M + P+ +T +I + A ++SL G HG ++ +
Sbjct: 101 LIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKS 160
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
+ S + V+N+L+ Y CG+++ + ++F + +D VSW ++++G+ + G ++ ++LF
Sbjct: 161 AVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELF 220
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+KM S +K VT++GVLSAC++ +E GR ++E + M+D+ ++
Sbjct: 221 KKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCS-YIEENRVNVNLTLANAMLDMYTK 279
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
G +E+AK + M D + W T+L I + E + S+ + D ++ L
Sbjct: 280 CGSIEDAKRLFDAME-EKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKD---IVAWNAL 335
Query: 485 SSIYASKGKWD------HVSQLRRTMR 505
S Y GK + H QL++ M+
Sbjct: 336 ISAYEQNGKPNEALIVFHELQLQKNMK 362
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 249/680 (36%), Positives = 371/680 (54%), Gaps = 64/680 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + +WN LI +AS + + ++ ++ ML + TF ++ +S +
Sbjct: 95 IPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFT 154
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ HG ++K GS VF+ + L+ YAK G + R F +P +++V
Sbjct: 155 GKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVV----------- 203
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SW +MIT +Q G EA++LF+EM + + + T V
Sbjct: 204 --------------------SWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGV 243
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+AC E G+ +H++I RN +++ + +A++DMY KC S++ A+ +F M K++
Sbjct: 244 LSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDI 303
Query: 241 VSWTAMLVGYG-------------------------------QNGCSEEAVKIFCNMQ-R 268
VSWT MLVGY Q G +EA+++F +Q
Sbjct: 304 VSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLS 363
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIED 328
+PD+ TL S +S+CA L +++ G H G+ ++ +L+ Y KCG+++
Sbjct: 364 KTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQK 423
Query: 329 SHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
+ +F+ + +D W+A+++G A G + I LF KM +KP+ VT +L ACS
Sbjct: 424 ALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSH 483
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
GLVE+GR +F M YG+ P HY CM+DIL RAG LEEA I KMP P A W
Sbjct: 484 VGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWG 543
Query: 449 TLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
LL +C IH NV + + A L+EL+P N +YVLLS+IYA GKWD VS LR+ MR+ G
Sbjct: 544 ALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVG 603
Query: 509 VRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVE 568
++K+PGCS I+ VH F D S P + +IYA+L+++ ++ GYVP+ S +L VE
Sbjct: 604 LKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLLQLVE 663
Query: 569 LSE-KIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILV 627
+ K + L HSEKLAIAFGL+ PIR+VKNLRVC DCH+ K +SK+ REIL+
Sbjct: 664 EEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILL 723
Query: 628 RDAVRFHLFKNGECSCGDFW 647
RD RFH F+ G CSC D+W
Sbjct: 724 RDRYRFHHFREGHCSCMDYW 743
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 200/432 (46%), Gaps = 66/432 (15%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYA--KLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+QIH +L+ G F S L+ A + A++ FD++P N+ +NT+I
Sbjct: 52 KQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYA 111
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+S +F R + D+FTF
Sbjct: 112 SSSNPHQSLLIF------------------------------LRMLHQSPDFPDKFTFPF 141
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
++ A L L GK H +I+ +VF+ ++L+ Y KC + VF + ++
Sbjct: 142 LIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRD 201
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VVSW +M+ + Q GC EEA+++F M+ ++P+ T+ V+S+CA + E G H
Sbjct: 202 VVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHS 261
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF----- 354
+ +T+SNA++ Y KCG++ED+ RLF++M +D VSWT ++ GYAK
Sbjct: 262 YIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDA 321
Query: 355 --------------------------GKANETIDLFEKM-LSHGLKPDEVTLIGVLSACS 387
GK E ++LF ++ LS KPDEVTL+ LSAC+
Sbjct: 322 AQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACA 381
Query: 388 RAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGW 447
+ G ++ G + + +K+ G++ T +ID+ + G L++A + + D W
Sbjct: 382 QLGAMDLGG-WIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVE-RKDVFVW 439
Query: 448 ATLLSSCRIHGN 459
+ +++ +HG+
Sbjct: 440 SAMIAGLAMHGH 451
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 164/327 (50%), Gaps = 18/327 (5%)
Query: 194 KQIHAFIIRNDHKDNVFVGSALVDMYC--KCKSIKYAESVFRTMAWKNVVSWTAMLVGYG 251
KQIHA ++R + F S L+ S+ YA+ VF + N+ +W ++ Y
Sbjct: 52 KQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYA 111
Query: 252 QNGCSEEAVKIFCNMQRNGIE-PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFI 310
+ +++ IF M + PD FT +I + + L L G FHG + L S +
Sbjct: 112 SSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDV 171
Query: 311 TVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH 370
+ N+L+ FY KCG + +R+F + RD VSW ++++ + + G E ++LF++M +
Sbjct: 172 FILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQ 231
Query: 371 GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEE 430
+KP+ +T++GVLSAC++ E GR + ++ I M+D+ ++ G +E+
Sbjct: 232 NVKPNGITMVGVLSACAKKSDFEFGR-WVHSYIERNRIGESLTLSNAMLDMYTKCGSVED 290
Query: 431 AKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKW-AAESLLELDP-YNPASYVLLSSIY 488
AK +KMP D + W T+L G +IG++ AA+ + + P + A++ L S Y
Sbjct: 291 AKRLFDKMP-EKDIVSWTTMLV-----GYAKIGEYDAAQGIFDAMPNQDIAAWNALISAY 344
Query: 489 ASKGKWD------HVSQLRRTMREKGV 509
GK H QL +T + V
Sbjct: 345 EQCGKPKEALELFHELQLSKTAKPDEV 371
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 258/655 (39%), Positives = 379/655 (57%), Gaps = 42/655 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSWN +I+G +G +AV+ Y M + + S T + L +S + L
Sbjct: 375 MTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGS-FTLISSLSSCASLKWAKL 433
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIHG LK G V V + L+ +YA+ G +
Sbjct: 434 GQQIHGESLKLGIDLNVSVSNALMTLYAETGYL--------------------------- 466
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLER---EAIDLFREMRLEGLAMDQFTF 177
E R++F M + D +SW ++I L ++ ER EA+ F + G +++ TF
Sbjct: 467 ----NECRKIFSSMPEHDQVSWNSIIGALARS--ERSLPEAVVCFLNAQRAGQKLNRITF 520
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA- 236
SVL+A L E GKQIH ++N+ D +AL+ Y KC + E +F MA
Sbjct: 521 SSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAE 580
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
++ V+W +M+ GY N +A+ + M + G D F +V+S+ A++A+LE G +
Sbjct: 581 RRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGME 640
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H S+ L S + V +ALV Y KCG ++ + R FN M VR+ SW +++SGYA+ G+
Sbjct: 641 VHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQ 700
Query: 357 ANETIDLFEKM-LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
E + LFE M L PD VT +GVLSACS AGL+E+G +FE M YG+ P +H+
Sbjct: 701 GEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHF 760
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC-RIHG-NVEIGKWAAESLLEL 473
+CM D+L RAG L++ + FI KMP P+ + W T+L +C R +G E+GK AAE L +L
Sbjct: 761 SCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQL 820
Query: 474 DPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWS 533
+P N +YVLL ++YA+ G+W+ + + R+ M++ V+K+ G SW+ K VH+F A D S
Sbjct: 821 EPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKS 880
Query: 534 SPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFI- 592
P +D IY +L++LNRKM GYVP L+D+E K ++L++HSEKLA+AF L
Sbjct: 881 HPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQR 940
Query: 593 PPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LPIR++KNLRVC DCH+A KYISKI R+I++RD+ RFH F++G CSC DFW
Sbjct: 941 SSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 136/458 (29%), Positives = 225/458 (49%), Gaps = 45/458 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD--LGR 62
+ VSWN +IS ++ G A ++++ M DG + TF +++ + S D L
Sbjct: 170 NSVSWNSIISVYSQAGDQRSAFRIFSSMQYDG-SRPTEYTFGSLVTTACSLTEPDVRLLE 228
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
QI I K G + +FVGS LV +AK G + A++ F+++ +N V N ++ GL+R+
Sbjct: 229 QIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQK 288
Query: 123 LVEESRRLFRGMK---DKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
EE+ +LF M D S+ +++ + L E
Sbjct: 289 WGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEE---------------------- 326
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
+ L++G+++H +I D V +G+ LV+MY KC SI A VF M K
Sbjct: 327 --------VGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDK 378
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+ VSW +M+ G QNGC EAV+ + +M+R+ I P FTL S +SSCA+L + G Q H
Sbjct: 379 DSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIH 438
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA- 357
G SL G+ ++VSNAL+T Y + G + + ++F+ M D+VSW +++ A+ ++
Sbjct: 439 GESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSL 498
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT- 416
E + F G K + +T VLSA S E G+ + +K I D T
Sbjct: 499 PEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKN----NIADEATT 554
Query: 417 --CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+I + G ++ + ++M D + W +++S
Sbjct: 555 ENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMIS 592
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/470 (26%), Positives = 222/470 (47%), Gaps = 58/470 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW ++SG++ +G +A+ M+K+G+ + ++ F ++L R C ++
Sbjct: 62 MPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFS-NQYAFVSVL-----RACQEI 115
Query: 61 -------GRQIHGHILKFGFGSYVFVGSPLVDMYAK-LGLIYDAKRGFDELPEKNIVMYN 112
GRQIHG + K + V + L+ MY K +G + A F ++ KN V +N
Sbjct: 116 GSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWN 175
Query: 113 TMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM 172
++I+ Q G +R A +F M+ +G
Sbjct: 176 -------------------------------SIISVYSQAGDQRSAFRIFSSMQYDGSRP 204
Query: 173 DQFTFGSVLTACGGLLA--LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAES 230
++TFGS++T L + +QI I ++ ++FVGS LV + K S+ YA
Sbjct: 205 TEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARK 264
Query: 231 VFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN-GIEPDDFTLGSVIS-----S 284
VF M +N V+ ++VG + EEA K+F +M + P+ + + ++S S
Sbjct: 265 VFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI--LLSSFPEYS 322
Query: 285 CANLASLEEGTQFHGRSLVTGLISF-ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
A L++G + HG + TGL+ F + + N LV Y KCG+I D+ R+F M +D VS
Sbjct: 323 LAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVS 382
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
W ++++G + G E ++ ++ M H + P TLI LS+C+ + G+ +
Sbjct: 383 WNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESL 442
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
K GI ++ + + G L E + + MP D + W +++ +
Sbjct: 443 K-LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 203/417 (48%), Gaps = 36/417 (8%)
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
+K++ + N +I L G +R++F M ++ +SW +++G +NG +EA+ R+
Sbjct: 33 DKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRD 92
Query: 165 MRLEGLAMDQFTFGSVLTACG--GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC 222
M EG+ +Q+ F SVL AC G + + G+QIH + + + + V + L+ MY KC
Sbjct: 93 MVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKC 152
Query: 223 -KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
S+ YA F + KN VSW +++ Y Q G A +IF +MQ +G P ++T GS+
Sbjct: 153 IGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSL 212
Query: 282 ISSCANLASLEEGTQFHGRSLVT----GLISFITVSNALVTFYGKCGNIEDSHRLFNEMN 337
+++ +L E + + + T GL++ + V + LV+ + K G++ + ++FN+M
Sbjct: 213 VTTACSLT--EPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQME 270
Query: 338 VRDEVSWTALVSGYAKFGKANETIDLFEKMLSH-GLKPDEVTLIGVLSACSRAGLVEKGR 396
R+ V+ L+ G + E LF M S + P+ ++ LS+ L E
Sbjct: 271 TRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVIL--LSSFPEYSLAE--- 325
Query: 397 HYFEIMVKEYGIRPIHDHYTC-------------MIDILSRAGRLEEAKSFINKMPFPPD 443
E+ +K+ R +H H ++++ ++ G + +A+ M D
Sbjct: 326 ---EVGLKKG--REVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT-DKD 379
Query: 444 AIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKG-KWDHVSQ 499
++ W ++++ +G +S+ D P S+ L+SS+ + KW + Q
Sbjct: 380 SVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL-PGSFTLISSLSSCASLKWAKLGQ 435
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 120/250 (48%), Gaps = 10/250 (4%)
Query: 196 IHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGC 255
H+ + +N +V++ + L++ Y + A VF M +N VSW ++ GY +NG
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 256 SEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE--EGTQFHGRSLVTGLISFITVS 313
+EA+ +M + GI + + SV+ +C + S+ G Q HG VS
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 314 NALVTFYGKC-GNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGL 372
N L++ Y KC G++ + F ++ V++ VSW +++S Y++ G +F M G
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 373 KPDEVTLIG-VLSACSRAGLVEKGRHYFE-IM--VKEYGIRPIHDHYTCMIDILSRAGRL 428
+P E T V +ACS L E E IM +++ G+ + ++ +++G L
Sbjct: 203 RPTEYTFGSLVTTACS---LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259
Query: 429 EEAKSFINKM 438
A+ N+M
Sbjct: 260 SYARKVFNQM 269
>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 676
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 248/649 (38%), Positives = 366/649 (56%), Gaps = 35/649 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP V+WN +IS H S G +A+++Y+ ML +G+ TFS + S
Sbjct: 61 MPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLP-DAYTFSAIFKAFSEMGVSRE 119
Query: 61 GRQIHGHILKFGFG-SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G++ HG + GF S FV + +VDMYAK G + DA+ FD +
Sbjct: 120 GQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVL--------------- 164
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
DKD + +T +I G Q GL+ EA+++F +M + +++T S
Sbjct: 165 ----------------DKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLAS 208
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL +CG L L GK IH ++++ + V ++L+ MY KC ++ + VF ++A+ +
Sbjct: 209 VLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYAS 268
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
V+WT+ +VG QNG E A+ +F M R I P+ FT S++ +C++LA LE G Q H
Sbjct: 269 HVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHA 328
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
++ G+ V AL+ YGKCGN+E + +F + D VS ++ YA+ G +E
Sbjct: 329 VTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHE 388
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
++LFE+M G KP+ VT I +L AC+ AGLVE+G F ++ + I DHYTCMI
Sbjct: 389 ALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMI 448
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L RA R EEA I + PD I W TLL++C+IHG VE+ + + +L+ P +
Sbjct: 449 DLLGRAKRFEEAAMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGG 507
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+++LL++IYAS GKWD+V +++ R+ ++K P SW+ VH F A D S P + +
Sbjct: 508 THILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHE 567
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLL-FIPPGLPI 598
I L +L K+I GY PD VL D+E +KI L +HSEKLAIAF L I
Sbjct: 568 ISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNTAI 627
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R+ KNLRVC DCH+ K++S +T R+I+ RDA RFH FK G CSC D+W
Sbjct: 628 RIFKNLRVCGDCHSWIKFVSLLTGRDIIARDAKRFHHFKGGICSCKDYW 676
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 202/395 (51%), Gaps = 34/395 (8%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
+++++ ++++ + + +H HILK G + F G L+D Y K +I +A++ FDE+P
Sbjct: 4 YTSLIAQFTNKKSLTTLKSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMP 62
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
++IV +N+MI+ + RG +EAI+L+
Sbjct: 63 NRHIVTWNSMISSHVSRGKT-------------------------------KEAIELYDN 91
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAF-IIRNDHKDNVFVGSALVDMYCKCK 223
M EG+ D +TF ++ A + EG++ H ++ + FV + +VDMY K
Sbjct: 92 MLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFG 151
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
+K A VF + K+VV +TA++VGY Q G EA+++F +M + I+P+++TL SV+
Sbjct: 152 KMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLV 211
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
SC NL L G HG + +GL S + +L+T Y KC +EDS ++FN + V+
Sbjct: 212 SCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVT 271
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
WT+ + G + G+ + +F +M+ + P+ T +L ACS ++E G + V
Sbjct: 272 WTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTV 331
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
K G+ +I + + G +E+A+S +
Sbjct: 332 K-LGVDGNKYVDAALIHLYGKCGNVEKARSVFESL 365
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 142/271 (52%), Gaps = 4/271 (1%)
Query: 194 KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQN 253
K +H I+++ + F G L+D Y KC I A +F M +++V+W +M+ +
Sbjct: 21 KSLHTHILKSGSLFSFF-GHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSR 79
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL-ISFITV 312
G ++EA++++ NM G+ PD +T ++ + + + EG + HG ++V G +S V
Sbjct: 80 GKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFV 139
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGL 372
+ +V Y K G ++D+ +F+ + +D V +TAL+ GY + G E +++FE M+ +
Sbjct: 140 ATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRI 199
Query: 373 KPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAK 432
KP+E TL VL +C G + G+ ++VK G+ + T ++ + S+ +E++
Sbjct: 200 KPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKS-GLESVVASQTSLLTMYSKCNMVEDSI 258
Query: 433 SFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
N + + + W + + +G EI
Sbjct: 259 KVFNSLAYASH-VTWTSFIVGLVQNGREEIA 288
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 241/641 (37%), Positives = 356/641 (55%), Gaps = 66/641 (10%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V +N++I + ++ DA+ VY M G T+ +L SS + +G QIHG
Sbjct: 86 VFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVP-DMYTYPCVLKASSRSDSLWVGLQIHG 144
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+LK G ++VG+ L+ MY K + +A++ DE+P +++V
Sbjct: 145 AVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVV----------------- 187
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
SW +M++ QNG +A++L REM L + T S+L A
Sbjct: 188 --------------SWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPA--- 230
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+ N DNV Y + +F + K+V+SW M
Sbjct: 231 --------------VTNTTSDNVL----------------YVKEMFLKLTKKSVISWNVM 260
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ Y N +EAV ++ M+ NG+EPD ++ SV+ + +L++L G + H + L
Sbjct: 261 IAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKL 320
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ + + NAL+ Y KCG + D+ +FN+M RD VSWT+++S Y K G+ + + +F +
Sbjct: 321 LPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAE 380
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M + GL PD + + VL+ACS AGL++ GR+YF +M E GI P +H+ C++D+L RAG
Sbjct: 381 MRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMA-ECGITPKLEHFACVVDLLGRAG 439
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+++EA FI +MP PD W LLS+CR++ N+ IG AA+ LL L+P + YVLLS+
Sbjct: 440 KIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLMLNPEHSGYYVLLSN 499
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IYA G+W V+ +R M KG++K PG S ++ VH F A D S P S +IY EL+
Sbjct: 500 IYAKAGRWADVAAIRSIMERKGIKKLPGISNVELNDGVHTFLAGDHSHPQSKKIYEELDV 559
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
L KM + GY+P+ S LHDVE +K L HSEKLA+AF ++ PG PIRV KNLRV
Sbjct: 560 LVGKMKELGYMPETDSALHDVEEEDKEYHLAVHSEKLAVAFAIINTKPGTPIRVTKNLRV 619
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCH A K ISKI +REI++RD RFH F+ G CSCGD+W
Sbjct: 620 CGDCHVAAKLISKIAEREIIIRDTHRFHHFQEGCCSCGDYW 660
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 107/195 (54%), Gaps = 1/195 (0%)
Query: 194 KQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
K++H ++ + + + N VG L+ +Y C A +F + KNVV + M+ Y
Sbjct: 38 KKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVN 97
Query: 253 NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITV 312
N ++A+ ++ M G PD +T V+ + + SL G Q HG L GL + V
Sbjct: 98 NHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYV 157
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGL 372
N L+ YGKC +++++ ++ +E+ RD VSW ++VS YA+ G+ N+ ++L +M + L
Sbjct: 158 GNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNL 217
Query: 373 KPDEVTLIGVLSACS 387
KP++ T+ +L A +
Sbjct: 218 KPNDCTMASLLPAVT 232
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M F D VSW +IS + G DAV V+ M GL N I F ++L S +D
Sbjct: 350 MQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGL-NPDSIAFVSVLAACSHAGLLDD 408
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
GR + + G + + +VD+ + G I +A ++P
Sbjct: 409 GRYYFNLMAECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMP 452
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 239/604 (39%), Positives = 344/604 (56%), Gaps = 32/604 (5%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
++++L + R + GRQ+HG +L G G + + LVD+YA GL
Sbjct: 65 YTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGL------------ 112
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
V +RRLF GM ++ W +I ++G AI L+R
Sbjct: 113 -------------------VGHARRLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRG 153
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M G+ D FT+ L AC LL LE G+++H ++ +++FV + LVDMY KC
Sbjct: 154 MVDYGVEPDNFTYPLALKACAALLDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGC 213
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A +VF + ++ V W +M+ YGQNG EA+ + +M NG+ P TL S IS+
Sbjct: 214 VDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISA 273
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
A+ A+L G + HG G + +LV Y K G ++ + LF ++ R+ VSW
Sbjct: 274 AADAAALPRGRELHGFGWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSW 333
Query: 345 TALVSGYAKFGKANETIDLFEKM-LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
A++ GY G +E + LF KM + + PD +T +GVLSAC+ G+V++ + +F +MV
Sbjct: 334 NAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMV 393
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
Y I+P H+TC++D+L AGR EEA I MP PD+ W LL+ C+IH NVE+G
Sbjct: 394 DVYSIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELG 453
Query: 464 KWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSR 523
+ A + L+EL+P + +YVLLS+IYA GKW+ +++R+ M +G++K GCSWI+ K +
Sbjct: 454 ELALQKLIELEPEDAGNYVLLSNIYAQSGKWEKAARVRKLMTNRGLKKIIGCSWIELKGK 513
Query: 524 VHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKL 583
H F D S P S +IY ELE+L M GY+PD V HDV EK M+ HSE+L
Sbjct: 514 THGFLVGDASHPRSAEIYEELERLEGLMSDAGYMPDTMPVFHDVGDDEKRNMMRSHSERL 573
Query: 584 AIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSC 643
AIAFGL+ P G + V KNLRVC DCH K IS+I QREI++RD R+H F NGECSC
Sbjct: 574 AIAFGLISTPSGTKLLVTKNLRVCEDCHVVIKLISQIVQREIIIRDVNRYHHFVNGECSC 633
Query: 644 GDFW 647
D+W
Sbjct: 634 KDYW 637
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 196/417 (47%), Gaps = 43/417 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + WN+LI +A G A+++Y M+ G+ T+ L ++ ++
Sbjct: 123 MPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGV-EPDNFTYPLALKACAALLDLET 181
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR++H +L +G +FV + LVDMYAK G + DA+ FD + ++ V++N
Sbjct: 182 GREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWN-------- 233
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+MI QNG EA+ L R+M G+ T S
Sbjct: 234 -----------------------SMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVST 270
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
++A AL G+++H F R + ++LVDMY K ++ A +F + + +
Sbjct: 271 ISAAADAAALPRGRELHGFGWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKREL 330
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQFHG 299
VSW AM+ GYG +G +EA+K+F M+ + PD+ T V+S+C + ++E +F G
Sbjct: 331 VSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFG 390
Query: 300 RSL-VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKA 357
+ V + + LV G G E+++ L M ++ D W AL++G K
Sbjct: 391 LMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGMPMQPDSGIWGALLNGC----KI 446
Query: 358 NETIDLFEKMLSH--GLKPDEVTLIGVLSAC-SRAGLVEKGRHYFEIMVKEYGIRPI 411
++ ++L E L L+P++ +LS +++G EK ++M G++ I
Sbjct: 447 HKNVELGELALQKLIELEPEDAGNYVLLSNIYAQSGKWEKAARVRKLMTNR-GLKKI 502
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/647 (36%), Positives = 357/647 (55%), Gaps = 34/647 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D + WN +ISG+ + ++++V+ ++ + L T +L + + + L
Sbjct: 180 MPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRL 239
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G QIH K G S+ +V + + +Y+K G I M +T
Sbjct: 240 GMQIHSLATKTGCYSHDYVLTGFISLYSKCG---------------KIKMAST------- 277
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
LFR + D +++ MI G NG ++ LF+E+ L G + T S+
Sbjct: 278 ---------LFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSL 328
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ G L+ + IH + ++++ + V +AL +Y K I+ A +F K++
Sbjct: 329 VPVSGHLMLI---YAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSL 385
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
SW AM+ GY QNG +E+A+ +F MQ + P+ T+ ++S+CA L +L G H
Sbjct: 386 PSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDL 445
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
T S I VS AL+ Y KCG+I ++ RLF+ M ++EV+W ++SGY G E
Sbjct: 446 VRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEA 505
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ +F +ML+ G+ P VT + VL ACS AGLV++G F M+ YG P HY C++D
Sbjct: 506 LTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVD 565
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
IL RAG L+ A FI MP P W TLL +CRIH + + + +E L ELDP N
Sbjct: 566 ILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGY 625
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
+VLLS+I+++ + + +R+T +++ + K PG + I+ H+F++ D S P I
Sbjct: 626 HVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKAI 685
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
+ +LEKL KM + GY P+ LHDVE E+ M+ HSE+LAIAFGL+ PG IR+
Sbjct: 686 HEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRI 745
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+KNLRVC DCH ATK ISKIT+R I+VRDA RFH FK+G CSCGD+W
Sbjct: 746 IKNLRVCLDCHTATKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 129/273 (47%), Gaps = 10/273 (3%)
Query: 195 QIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNG 254
Q HA I+ + ++++ + + L +I YA +F ++ +V + ++ G+ N
Sbjct: 38 QTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 255 CSEEAVKIFCNMQRN-GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVS 313
++ +F +++++ ++P+ T IS+ + G HG+++V G S + +
Sbjct: 98 SPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLG 157
Query: 314 NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG-L 372
+ +V Y K +ED+ ++F+ M +D + W ++SGY K E+I +F +++
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 373 KPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE--YGIRPIHDH-YTCMIDILSRAGRLE 429
+ D TL+ +L A + + G + K Y HD+ T I + S+ G+++
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYS----HDYVLTGFISLYSKCGKIK 273
Query: 430 EAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
A + + PD + + ++ +G E+
Sbjct: 274 MASTLFREFR-RPDIVAYNAMIHGYTSNGETEL 305
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/670 (35%), Positives = 372/670 (55%), Gaps = 63/670 (9%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN +I G++ + V +Y LML + R TF +L + + G+ + H
Sbjct: 75 WNTMIKGYSRINHPQNGVSMYLLMLASNI-KPDRFTFPFLLKGFTRNMALQYGKVLLNHA 133
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+K GF S +FV + M++ L+ A++ FD +V +N M++G R ++S+
Sbjct: 134 VKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSK 193
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
LF EM G++ + T +L+AC L
Sbjct: 194 M-------------------------------LFIEMEKRGVSPNSVTLVLMLSACSKLK 222
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
LE GK I+ +I + N+ + + L+DM+ C + A+SVF M ++V+SWT+++
Sbjct: 223 DLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVT 282
Query: 249 GYGQNGCSE-------------------------------EAVKIFCNMQRNGIEPDDFT 277
G+ G + EA+ +F MQ + ++PD+FT
Sbjct: 283 GFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFT 342
Query: 278 LGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN 337
+ S++++CA+L +LE G + + V NAL+ Y KCGN+ + ++F EM+
Sbjct: 343 MVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMH 402
Query: 338 VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH 397
+D+ +WTA++ G A G E + +F M+ + PDE+T IGVL AC+ AG+VEKG+
Sbjct: 403 HKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQS 462
Query: 398 YFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIH 457
+F M ++GI+P HY CM+D+L RAGRLEEA I MP P++I W +LL +CR+H
Sbjct: 463 FFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVH 522
Query: 458 GNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSW 517
NV++ + AA+ +LEL+P N A YVLL +IYA+ +W+++ Q+R+ M E+G++K PGCS
Sbjct: 523 KNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSL 582
Query: 518 IKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLN 577
++ V+ F A D S P S +IYA+LE + + +IK GY PD S V D+ +K L
Sbjct: 583 MELNGNVYEFVAGDQSHPQSKEIYAKLENMMQDLIKAGYSPDTSEVFLDLGEEDKETALY 642
Query: 578 HHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFK 637
HSEKLAIA+ L+ PG+ IR+VKNLR+C DCH+ K +S+ RE++VRD RFH F+
Sbjct: 643 RHSEKLAIAYALISSGPGITIRIVKNLRMCVDCHHMAKLVSEAYNRELIVRDKTRFHHFR 702
Query: 638 NGECSCGDFW 647
+G CSC +FW
Sbjct: 703 HGSCSCNNFW 712
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 214/388 (55%), Gaps = 9/388 (2%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V+WN+++SG+ + ++ M K G+ S +T ML S + ++ G+ I+
Sbjct: 174 VTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNS-VTLVLMLSACSKLKDLEGGKHIYK 232
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+I + + + L+DM+A G + +A+ FD + ++++ + +++TG G ++
Sbjct: 233 YINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDL 292
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+R+ F + ++D +SWT MI G ++ EA+ LFREM++ + D+FT S+LTAC
Sbjct: 293 ARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAH 352
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L ALE G+ + +I +N K++ FVG+AL+DMY KC ++ A+ VF+ M K+ +WTAM
Sbjct: 353 LGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAM 412
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH-GRSLVTG 305
+VG NG EEA+ +F NM I PD+ T V+ +C + +E+G F ++ G
Sbjct: 413 IVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHG 472
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKANETIDLF 364
+ +T +V G+ G +E++H + M V+ + + W +L+ G + K + ++
Sbjct: 473 IKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLL-GACRVHKNVQLAEMA 531
Query: 365 EKMLSHGLKPDE----VTLIGVLSACSR 388
K + L+P+ V L + +AC R
Sbjct: 532 AKQILE-LEPENGAVYVLLCNIYAACKR 558
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/433 (23%), Positives = 192/433 (44%), Gaps = 66/433 (15%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+QIH H +K G S D L +K ++ +
Sbjct: 24 KQIHSHTIKMGLSS-------------------------DPLFQKRVIAF----CCAHES 54
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G + +R++F + W TMI G + + + ++ M + D+FTF +L
Sbjct: 55 GKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLL 114
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM-AWKNV 240
+AL+ GK + +++ N+FV A + M+ C+ + A VF AW+ V
Sbjct: 115 KGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWE-V 173
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+W ML GY + +++ +F M++ G+ P+ TL ++S+C+ L LE G + +
Sbjct: 174 VTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIY-K 232
Query: 301 SLVTGLISF-ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN- 358
+ G++ + + N L+ + CG ++++ +F+ M RD +SWT++V+G+A G+ +
Sbjct: 233 YINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDL 292
Query: 359 ------------------------------ETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
E + LF +M +KPDE T++ +L+AC+
Sbjct: 293 ARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAH 352
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
G +E G + + + + I+ +ID+ + G + +AK +M D W
Sbjct: 353 LGALELGE-WVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEM-HHKDKFTWT 410
Query: 449 TLLSSCRIHGNVE 461
++ I+G+ E
Sbjct: 411 AMIVGLAINGHGE 423
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 153/336 (45%), Gaps = 10/336 (2%)
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIK--YAESVFRTMA 236
S+L C + L KQIH+ I+ + ++ C +S K YA VF +
Sbjct: 12 SLLEKCKSMYQL---KQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIP 68
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
+ W M+ GY + + V ++ M + I+PD FT ++ +L+ G
Sbjct: 69 QPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKV 128
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
++ G S + V A + + C ++ + ++F+ + + V+W ++SGY + +
Sbjct: 129 LLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQ 188
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
++ LF +M G+ P+ VTL+ +LSACS+ +E G+H ++ + R +
Sbjct: 189 FKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILE-N 247
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY 476
+ID+ + G ++EA+S + M D I W ++++ G +++ + + + E D
Sbjct: 248 VLIDMFAACGEMDEAQSVFDNMK-NRDVISWTSIVTGFANIGQIDLARKYFDQIPERD-- 304
Query: 477 NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKD 512
S+ + Y ++ L R M+ V+ D
Sbjct: 305 -YVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPD 339
>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 755
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 243/657 (36%), Positives = 375/657 (57%), Gaps = 18/657 (2%)
Query: 8 SWNLLISGHA-SHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
+W +LISG A + GS ++ M DG ++ T S++L S + G+ IH
Sbjct: 100 TWTILISGFARAAGSSELVFSLFREMQADG-ACPNQYTLSSVLKCCSRENNIQFGKGIHA 158
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
IL+ G G V + + ++D+Y K A+ F+ + EK++V +N MI LR G VE+
Sbjct: 159 WILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEK 218
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
S +FR +KD +SW T+I GL+Q G ER A++ M G TF L
Sbjct: 219 SLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSS 278
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK-------- 238
L +E G+Q+H ++ + ++ S+LV+MY KC + A ++ + +
Sbjct: 279 LSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFG 338
Query: 239 --------NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS 290
+VSW++M+ GY NG E+ +K F +M I D T+ ++IS+CAN
Sbjct: 339 VTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGI 398
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
LE G Q H GL V ++L+ Y K G+++D+ +F ++ + V WT+++SG
Sbjct: 399 LEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISG 458
Query: 351 YAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP 410
A G+ E I LFE ML+ G+ P+EVT +GVL+ACS GL+E+G YF +M Y I P
Sbjct: 459 CALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINP 518
Query: 411 IHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL 470
+HYT M+++ RAG L EAK+FI + W + LSSCR+H N +GK +E L
Sbjct: 519 EVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSVSEML 578
Query: 471 LELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSAD 530
L+ P +P +Y+LLS++ +S +WD + +R M ++GV+K PG SW++ K ++H F+
Sbjct: 579 LQSAPSDPDAYILLSNMCSSNHQWDEAAIVRSLMYQRGVKKQPGQSWVQLKDQIHSFTVG 638
Query: 531 DWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLL 590
D S P +IY+ L+ L ++ + GY D V+ DVE + +++HHSEKLA+ F ++
Sbjct: 639 DRSHPQDKEIYSYLDSLIGRLKEIGYSLDAKLVMQDVEEEQGEVLISHHSEKLALVFSII 698
Query: 591 FIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
P PIR++KNLR+C+DCHN KY S++ +REI+VRD RFH FK CSCG++W
Sbjct: 699 NTSPRTPIRIMKNLRICNDCHNFFKYASQLLEREIIVRDTHRFHHFKQSSCSCGEYW 755
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 208/449 (46%), Gaps = 87/449 (19%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
R +HGH K G + + L+ +Y K + A + FDE+ KN + +I+G R
Sbjct: 52 RALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARA 111
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G LFREM+ +G +Q+T SVL
Sbjct: 112 A------------------------------GSSELVFSLFREMQADGACPNQYTLSSVL 141
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
C ++ GK IHA+I+RN +V + ++++D+Y KCK +YAES F M K+VV
Sbjct: 142 KCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVV 201
Query: 242 SWTAMLVGYGQNGCSEEAVKIF--------------------CNMQRNGIE--------- 272
SW M+ Y + G E+++++F C +R +E
Sbjct: 202 SWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHG 261
Query: 273 ----PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIED 328
P F++ ++ S +L+ +E G Q HGR L GL S + ++LV YGKCG ++
Sbjct: 262 TEFSPVTFSIALILVS--SLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDK 319
Query: 329 SHRLFNEMNVR----------------DEVSWTALVSGYAKFGKANETIDLFEKMLSHGL 372
+ + ++ + VSW+++VSGY GK + + F M+ +
Sbjct: 320 ASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELI 379
Query: 373 KPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--TCMIDILSRAGRLEE 430
D T+ ++SAC+ AG++E G+ +++ G+R D Y + +ID+ S++G L++
Sbjct: 380 VVDIRTVATIISACANAGILEFGKQ-IHAYIQKIGLRI--DAYVGSSLIDMYSKSGSLDD 436
Query: 431 AKSFINKMPFPPDAIGWATLLSSCRIHGN 459
A ++ P+ + W +++S C +HG
Sbjct: 437 ALMIFEQIK-EPNVVLWTSMISGCALHGQ 464
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 90/164 (54%), Gaps = 5/164 (3%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW+ ++SG+ +G D +K + M+ + L + T +T++ ++ ++ G+QIH
Sbjct: 349 VSWSSMVSGYVWNGKYEDGMKTFRSMVCE-LIVVDIRTVATIISACANAGILEFGKQIHA 407
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+I K G +VGS L+DMY+K G + DA F+++ E N+V++ +MI+G G +E
Sbjct: 408 YIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKE 467
Query: 127 SRRLFRGMKD----KDSISWTTMITGLMQNGLEREAIDLFREMR 166
+ LF GM + + +++ ++ GL E FR M+
Sbjct: 468 AISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMK 511
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 91/183 (49%), Gaps = 3/183 (1%)
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
S + S ++ S HG G + + +N L+T Y K N++ +H+LF+E+ +
Sbjct: 37 SFLHSTTSIGSPPSLRALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHK 96
Query: 340 DEVSWTALVSGYAKFGKANETI-DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
+ +WT L+SG+A+ ++E + LF +M + G P++ TL VL CSR ++ G+
Sbjct: 97 NTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGI 156
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+++ G+ ++D+ + E A+SF M D + W ++ + G
Sbjct: 157 HAWILRN-GVGGDVVLENSILDLYLKCKEFEYAESFFELM-IEKDVVSWNIMIGAYLREG 214
Query: 459 NVE 461
+VE
Sbjct: 215 DVE 217
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 240/643 (37%), Positives = 361/643 (56%), Gaps = 32/643 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V WN ++SG + ++A+ ++ M+K G+G T + +L + + + LG I
Sbjct: 171 DTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIG-FDSTTVAAVLPGVAELQDLALGMGI 229
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
+K GF S+ +V + L +Y+K G I
Sbjct: 230 QCLAMKVGFHSHAYVITGLACLYSKCGEI------------------------------- 258
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
E +R LF + D +S+ MI+G N ++ LF+E+ + G ++ + ++
Sbjct: 259 ETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVF 318
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L + IH F ++ N V +AL +Y + I+ A +F + K++ SW
Sbjct: 319 FPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWN 378
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
AM+ GY QNG +E+A+ +F MQ+ + P+ T+ S++S+CA L +L G H
Sbjct: 379 AMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRE 438
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
S I VS AL+ Y KCG+I ++ RLF+ M ++ V+W A++SGY G +E ++LF
Sbjct: 439 SFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLF 498
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+ML + P VT + VL ACS AGLV +G F MV ++G P+ +HY CM+D+L R
Sbjct: 499 NEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGR 558
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG L++A FI KMP P W LL +C IH + + + A++ L ELDP N YVLL
Sbjct: 559 AGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLL 618
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S+IY++ + + +R ++ + + K PGC+ I+ + +HIF++ D S P + IYA L
Sbjct: 619 SNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQATAIYAML 678
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
EKL KM + G+ + + LHDVE EK M+ HSEKLAIAFGL+ PG IR++KNL
Sbjct: 679 EKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSEKLAIAFGLITSEPGTEIRIIKNL 738
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RVC DCHNATK+ISKIT+R I+VRDA RFH FK+G CSCGD+W
Sbjct: 739 RVCLDCHNATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 781
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 130/491 (26%), Positives = 228/491 (46%), Gaps = 41/491 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D +N+LI + + S + AV +Y + K L F+ ++S +
Sbjct: 68 IPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKST--PLEPDNFTYAFVISGASSLGLG 125
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
I+ GFGS +FVGS +V Y K + A++ FD + E++ V++NTM++GL++
Sbjct: 126 LLLHAHSIVA-GFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVK 184
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
N EAI +F +M G+ D T +V
Sbjct: 185 -------------------------------NSCFDEAILIFGDMVKGGIGFDSTTVAAV 213
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L L L G I ++ + +V + L +Y KC I+ A +F + ++
Sbjct: 214 LPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDL 273
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VS+ AM+ GY N +E +V++F + +G + + ++ +I L HG
Sbjct: 274 VSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGF 333
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+G++S +VS AL T Y + IE + LF+E + + SW A++SGYA+ G +
Sbjct: 334 CTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKA 393
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
I LF++M ++P+ VT+ +LSAC++ G + G+ +++ +E I T +ID
Sbjct: 394 ISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVS-TALID 452
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL--DPYNP 478
+ ++ G + EA+ + MP +A+ W ++S +HG G A E+ +P
Sbjct: 453 MYAKCGSITEAQRLFSMMP-EKNAVTWNAMISGYGLHG---YGHEALNLFNEMLHSRVSP 508
Query: 479 ASYVLLSSIYA 489
LS +YA
Sbjct: 509 TGVTFLSVLYA 519
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 177/425 (41%), Gaps = 50/425 (11%)
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG-LAMDQFTFGSVLT 182
++++ LF + + D + +I N A+ L+ +R L D FT+ V++
Sbjct: 58 IDQASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVIS 117
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
L I ++FVGSA+V Y K + A VF M ++ V
Sbjct: 118 GASSLGLGLLLHAHS---IVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVL 174
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL 302
W M+ G +N C +EA+ IF +M + GI D T+ +V+ A L L G ++
Sbjct: 175 WNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAM 234
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
G S V L Y KCG IE + LF ++ D VS+ A++SGY + ++
Sbjct: 235 KVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVR 294
Query: 363 LFEKMLSHGLKPDEVTLIGV-----------LSAC------------------------S 387
LF+++L G K + +++G+ L+ C S
Sbjct: 295 LFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYS 354
Query: 388 RAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP---FPPDA 444
R +E R F+ E + + + MI ++ G E+A S +M P+
Sbjct: 355 RLNEIESARLLFD----ESSEKSLAS-WNAMISGYAQNGLTEKAISLFQEMQKCEVRPNP 409
Query: 445 IGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYV--LLSSIYASKGKWDHVSQLRR 502
+ ++LS+C G + +GKW + L+ + + +V L +YA G +L
Sbjct: 410 VTVTSILSACAQLGALSLGKWVHD-LINRESFESNIFVSTALIDMYAKCGSITEAQRLFS 468
Query: 503 TMREK 507
M EK
Sbjct: 469 MMPEK 473
>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
Length = 864
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/554 (40%), Positives = 344/554 (62%), Gaps = 4/554 (0%)
Query: 83 LVDMYAKLGLIYDAKRGFDELP----EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKD 138
++ + A+ G + +AK ++ E ++ + N +I + G VE +R++F GM ++
Sbjct: 59 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 118
Query: 139 SISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHA 198
+SW TMI +N +E EA+D+F EMR EG +FT SVL+ACG E K++H
Sbjct: 119 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 178
Query: 199 FIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEE 258
++ N++VG+AL+D+Y KC IK A VF +M K+ V+W++M+ GY QN EE
Sbjct: 179 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 238
Query: 259 AVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVT 318
A+ ++ QR +E + FTL SVI +C+NLA+L EG Q H +G S + V+++ V
Sbjct: 239 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 298
Query: 319 FYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVT 378
Y KCG++ +S+ +F+E+ ++ W ++SG+AK + E + LFEKM G+ P+EVT
Sbjct: 299 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 358
Query: 379 LIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
+LS C GLVE+GR +F++M YG+ P HY+CM+DIL RAG L EA I +
Sbjct: 359 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 418
Query: 439 PFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVS 498
PF P A W +LL+SCR++ N+E+ + AAE L EL+P N ++VLLS+IYA+ +W+ ++
Sbjct: 419 PFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIA 478
Query: 499 QLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVP 558
+ R+ +R+ V+K G SWI K +VH FS + P +I + L+ L K K GY P
Sbjct: 479 KSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKP 538
Query: 559 DMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYIS 618
+ LHDVE+ +K ++L HSEKLA+ FGL+ +P P+R++KNLR+C DCH K S
Sbjct: 539 SVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAAS 598
Query: 619 KITQREILVRDAVR 632
T+R I+VRD R
Sbjct: 599 MATRRFIIVRDVNR 612
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 174/347 (50%), Gaps = 36/347 (10%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG-RQIH 65
VSWN +I + + ++A+ ++ M +G S T S++L + C L +++H
Sbjct: 120 VSWNTMIGLYTRNRMESEALDIFLEMRNEGF-KFSEFTISSVL-SACGVNCDALECKKLH 177
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
+K ++VG+ L+D+YAK G+I DA + F+ + +K+ V +++M+ G +
Sbjct: 178 CLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYV------ 231
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
QN EA+ L+R + L +QFT SV+ AC
Sbjct: 232 -------------------------QNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACS 266
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
L AL EGKQ+HA I ++ NVFV S+ VDMY KC S++ + +F + KN+ W
Sbjct: 267 NLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNT 326
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT- 304
++ G+ ++ +E + +F MQ++G+ P++ T S++S C + +EEG +F T
Sbjct: 327 IISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTY 386
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSG 350
GL + + +V G+ G + +++ L + S W +L++
Sbjct: 387 GLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 433
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 122/252 (48%), Gaps = 36/252 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M V+W+ +++G+ + + +A+ +Y + L ++ T S+++ S+ +
Sbjct: 215 MQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQ-NQFTLSSVICACSNLAALIE 273
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H I K GFGS VFV S VDMYAK G + ++ F E+ EKN+ ++NT+I+G +
Sbjct: 274 GKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAK 333
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ +E + LF +M+ +G+ ++ TF S+
Sbjct: 334 -------------------------------HARPKEVMILFEKMQQDGMHPNEVTFSSL 362
Query: 181 LTACGGLLALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
L+ CG +EEG++ ++R + NV S +VD+ + + A + +++ +
Sbjct: 363 LSVCGHTGLVEEGRRFFK-LMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFD 421
Query: 239 NVVS-WTAMLVG 249
S W ++L
Sbjct: 422 PTASIWGSLLAS 433
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/518 (42%), Positives = 328/518 (63%)
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
+F + + + +W T+I G ++ A +R+M + + D T+ +L A L
Sbjct: 74 VFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLN 133
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
+ EG+ IH+ IRN + VFV ++L+ +Y C + A VF M +++V+W +M+ G
Sbjct: 134 VREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMING 193
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
+ NG EA+ +F M G+EPD FT+ S++S+ A L +LE G + H L GL
Sbjct: 194 FALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKN 253
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
V+N+L+ Y KCG I ++ R+F+EM+ R+ VSWT+L+ G A G E ++LF++M
Sbjct: 254 SHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEG 313
Query: 370 HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLE 429
GL P E+T +GVL ACS G++++G YF M +E GI P +HY CM+D+LSRAG ++
Sbjct: 314 QGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVK 373
Query: 430 EAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYA 489
+A +I MP P+A+ W TLL +C IHG++ +G+ A LL L+P + YVLLS++YA
Sbjct: 374 QAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYA 433
Query: 490 SKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNR 549
S+ +W V +RR+M + GV+K PG S ++ +RV+ F+ D S P S +YA LEK+
Sbjct: 434 SERRWSDVQVIRRSMLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITE 493
Query: 550 KMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSD 609
+ EGYVP ++VL D+E EK + L++HSEK+AIAF LL PPG PIRV+KNLRVC+D
Sbjct: 494 LLKLEGYVPHTANVLADIEEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRVCAD 553
Query: 610 CHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
CH A K I+KI REI++RD RFH F+ G CSC D+W
Sbjct: 554 CHMAIKLIAKIYDREIVIRDRSRFHHFRGGSCSCKDYW 591
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 172/343 (50%), Gaps = 34/343 (9%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
+WN +I G+A + + A Y M+ + + T+ +L S V G IH
Sbjct: 85 TWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTH-TYPFLLKAISKSLNVREGEAIHSV 143
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
++ GF S VFV + L+ +YA G E +
Sbjct: 144 TIRNGFESLVFVQNSLLHIYAACGD-------------------------------TESA 172
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
++F MK++D ++W +MI G NG EA+ LFREM +EG+ D FT S+L+A L
Sbjct: 173 YKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAEL 232
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
ALE G+++H ++++ N V ++L+D+Y KC +I+ A+ VF M+ +N VSWT+++
Sbjct: 233 GALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLI 292
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR-SLVTGL 306
VG NG EEA+++F M+ G+ P + T V+ +C++ L+EG ++ R G+
Sbjct: 293 VGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGI 352
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALV 348
I I +V + G ++ ++ M V+ + V W L+
Sbjct: 353 IPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLL 395
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 167/338 (49%), Gaps = 16/338 (4%)
Query: 181 LTACGGLLAL-----EEGKQIHAFIIRNDHK-DNVFVGSALV-DMYCKCKSIKYAESVFR 233
LT C LL + KQIHAF IR+ +N +G L+ + + YA +VF
Sbjct: 17 LTKCISLLQFCASSKHKLKQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFT 76
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE 293
+ NV +W ++ GY ++ A + M + +EPD T ++ + + ++ E
Sbjct: 77 VIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVRE 136
Query: 294 GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK 353
G H ++ G S + V N+L+ Y CG+ E ++++F M RD V+W ++++G+A
Sbjct: 137 GEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFAL 196
Query: 354 FGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
G+ NE + LF +M G++PD T++ +LSA + G +E GR ++K G+
Sbjct: 197 NGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLK-VGLSKNSH 255
Query: 414 HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL 473
++D+ ++ G + EA+ ++M +A+ W +L+ ++G G+ A E E+
Sbjct: 256 VTNSLLDLYAKCGAIREAQRVFSEMS-ERNAVSWTSLIVGLAVNG---FGEEALELFKEM 311
Query: 474 DPYN--PASYVLLSSIYASK--GKWDHVSQLRRTMREK 507
+ P+ + +YA G D + R M+E+
Sbjct: 312 EGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEE 349
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 125/278 (44%), Gaps = 49/278 (17%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D V+WN +I+G A +G N+A+ ++ M +G+ T ++L S+ ++L
Sbjct: 179 MKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGV-EPDGFTVVSLLSASAELGALEL 237
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR++H ++LK G V + L+D+YAK G I +A+R F E+ E+N V + ++I GL
Sbjct: 238 GRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAV 297
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G EE A++LF+EM +GL + TF V
Sbjct: 298 NGFGEE-------------------------------ALELFKEMEGQGLVPSEITFVGV 326
Query: 181 LTACGGLLALEEG-------KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
L AC L+EG K+ I R +H +VD+ + +K A +
Sbjct: 327 LYACSHCGMLDEGFEYFRRMKEECGIIPRIEHY------GCMVDLLSRAGLVKQAYEYIQ 380
Query: 234 TMAWK-NVVSWTAMLVG---YGQNGCSEEAVKIFCNMQ 267
M + N V W +L +G G E A N++
Sbjct: 381 NMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLE 418
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/604 (37%), Positives = 360/604 (59%), Gaps = 36/604 (5%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
T+S ++ S R V G I H+ G +F+ + L++MY K L+ DA
Sbjct: 63 TYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDA------- 115
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
+LF M ++ ISWTTMI+ + + ++A++L
Sbjct: 116 ------------------------HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLV 151
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
M + + + +T+ SVL +C G+ + + +H II+ + +VFV SAL+D++ K
Sbjct: 152 LMLRDNVRPNVYTYSSVLRSCNGM---SDVRMLHCGIIKEGLESDVFVRSALIDVFAKLG 208
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
+ A SVF M + + W +++ G+ QN S+ A+++F M+R G + TL SV+
Sbjct: 209 EPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLR 268
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+C LA LE G Q H + + ++NALV Y KCG++ED+ R+FN+M RD ++
Sbjct: 269 ACTGLALLELGMQAHVH--IVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVIT 326
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
W+ ++SG A+ G + E + LFE+M S G KP+ +T++GVL ACS AGL+E G +YF M
Sbjct: 327 WSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMK 386
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
K YGI P+ +HY CMID+L +AG+L++A +N+M PDA+ W TLL +CR+ N+ +
Sbjct: 387 KLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLA 446
Query: 464 KWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSR 523
++AA+ ++ LDP + +Y LLS+IYA+ KWD V ++R MR++G++K+PGCSWI+ +
Sbjct: 447 EYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQ 506
Query: 524 VHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKL 583
+H F D S P ++ +L +L ++ GYVP+ + VL D+E + L HHSEKL
Sbjct: 507 IHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKL 566
Query: 584 AIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSC 643
A+AFGL+ +P IR+ KNLR+C DCH K SK+ R I++R +R+H F++G+CSC
Sbjct: 567 ALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRGPIRYHHFQDGKCSC 626
Query: 644 GDFW 647
GD+W
Sbjct: 627 GDYW 630
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 181/354 (51%), Gaps = 43/354 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +SW +IS ++ A+++ LML+D + + T+S++L R C +
Sbjct: 122 MPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNV-RPNVYTYSSVL-----RSCNGM 175
Query: 61 G--RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
R +H I+K G S VFV S L+D++AKLG DA FDE+ + +++N+
Sbjct: 176 SDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNS----- 230
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+I G QN A++LF+ M+ G +Q T
Sbjct: 231 --------------------------IIGGFAQNSRSDVALELFKRMKRAGFIAEQATLT 264
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
SVL AC GL LE G Q H I++ D ++ + +ALVDMYCKC S++ A VF M +
Sbjct: 265 SVLRACTGLALLELGMQAHVHIVKYDQ--DLILNNALVDMYCKCGSLEDALRVFNQMKER 322
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQF 297
+V++W+ M+ G QNG S+EA+K+F M+ +G +P+ T+ V+ +C++ LE+G F
Sbjct: 323 DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYF 382
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
+ G+ ++ GK G ++D+ +L NEM D V+W L+
Sbjct: 383 RSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 156/302 (51%), Gaps = 8/302 (2%)
Query: 151 QNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVF 210
Q L R A+ ++ GL D T+ ++ C A+ EG I + N H+ +F
Sbjct: 39 QRDLPR-AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMF 97
Query: 211 VGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
+ + L++MY K + A +F M +NV+SWT M+ Y + ++A+++ M R+
Sbjct: 98 LVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN 157
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
+ P+ +T SV+ SC ++ + H + GL S + V +AL+ + K G ED+
Sbjct: 158 VRPNVYTYSSVLRSCNGMSDVR---MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDAL 214
Query: 331 RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
+F+EM D + W +++ G+A+ +++ ++LF++M G ++ TL VL AC+
Sbjct: 215 SVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLA 274
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATL 450
L+E G +VK Y I ++ ++D+ + G LE+A N+M D I W+T+
Sbjct: 275 LLELGMQAHVHIVK-YDQDLILNN--ALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTM 330
Query: 451 LS 452
+S
Sbjct: 331 IS 332
>gi|356540347|ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 753
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/645 (35%), Positives = 370/645 (57%), Gaps = 37/645 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGL-GNLSRITFSTMLIMSSSRRCVDLGRQ 63
D SW +IS + G +++AV ++ ML G+ N S FST+++ + +DLG+Q
Sbjct: 144 DLSSWATIISAYTEEGRIDEAVGLFLRMLDLGIIPNFS--IFSTLIMSFADPSMLDLGKQ 201
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
IH +++ F + + + + + +MY K G + A+ ++
Sbjct: 202 IHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATNK--------------------- 240
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
M K +++ T ++ G Q R+A+ LF +M EG+ +D F F +L A
Sbjct: 241 ----------MTRKSAVACTGLMVGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKA 290
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C L L GKQIH++ I+ + V VG+ LVD Y KC + A F ++ N SW
Sbjct: 291 CAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSW 350
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
+A++ GY Q+G + A+++F ++ G+ + F ++ +C+ ++ L G Q H ++
Sbjct: 351 SALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIK 410
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
GL+++++ +A++T Y KCG ++ +H+ F ++ D V+WTA++ +A GKA+E + L
Sbjct: 411 KGLVAYLSGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRL 470
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F++M G++P+ VT IG+L+ACS +GLV++G+ + + M +YG+ P DHY CMIDI S
Sbjct: 471 FKEMQGSGVRPNVVTFIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYS 530
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
RAG L EA I MPF PD + W +LL C N+EIG AA+++ LDP + A+YV+
Sbjct: 531 RAGLLLEALEVIRSMPFEPDVMSWKSLLGGCWSRRNLEIGMIAADNIFRLDPLDSATYVI 590
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
+ ++YA GKWD +Q R+ M E+ +RK+ CSWI K +VH F D P ++QIY++
Sbjct: 591 MFNLYALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSK 650
Query: 544 LEKLNRKMIK-EGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVK 602
L++LN K E + + + L D +E+ L HSE+LAIA+GL+ PI V K
Sbjct: 651 LKELNVSFKKGEERLLNEENALCD--FTERKDQLLDHSERLAIAYGLICTAADTPIMVFK 708
Query: 603 NLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
N R C DCH K +S +T RE++VRD RFH +GECSC D+W
Sbjct: 709 NTRSCKDCHEFAKRVSVVTGRELVVRDGNRFHHINSGECSCRDYW 753
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 177/379 (46%), Gaps = 5/379 (1%)
Query: 83 LVDMYAKLGLIYDAK---RGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDS 139
L M LG + D K + N + N ++ + R F + D+D
Sbjct: 86 LFKMCGTLGALSDGKLFHNRLQRMANSNKFIDNCILQMYCDCKSFTAAERFFDKIVDRDL 145
Query: 140 ISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAF 199
SW T+I+ + G EA+ LF M G+ + F +++ + L+ GKQIH+
Sbjct: 146 SSWATIISAYTEEGRIDEAVGLFLRMLDLGIIPNFSIFSTLIMSFADPSMLDLGKQIHSQ 205
Query: 200 IIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEA 259
+IR + ++ + + + +MY KC + AE M K+ V+ T ++VGY Q + +A
Sbjct: 206 LIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLMVGYTQAARNRDA 265
Query: 260 VKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTF 319
+ +F M G+E D F ++ +CA L L G Q H + GL S ++V LV F
Sbjct: 266 LLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDF 325
Query: 320 YGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTL 379
Y KC E + + F ++ ++ SW+AL++GY + GK + +++F+ + S G+ +
Sbjct: 326 YVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIY 385
Query: 380 IGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP 439
+ ACS + G +K+ G+ + MI + S+ G+++ A +
Sbjct: 386 NNIFQACSAVSDLICGAQIHADAIKK-GLVAYLSGESAMITMYSKCGKVDYAHQAFLAID 444
Query: 440 FPPDAIGWATLLSSCRIHG 458
PD + W ++ + HG
Sbjct: 445 -KPDTVAWTAIICAHAYHG 462
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 167/379 (44%), Gaps = 37/379 (9%)
Query: 131 FRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLAL 190
FR +++ + L + G R+ + R M + G++++ ++ + CG L AL
Sbjct: 37 FRTHQNQQGQVENLHLISLAKQGKLRQVHEFIRNMDIAGISINPRSYEYLFKMCGTLGAL 96
Query: 191 EEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGY 250
+GK H + R + N F+ + ++ MYC CKS AE F + +++ SW ++ Y
Sbjct: 97 SDGKLFHNRLQRMANS-NKFIDNCILQMYCDCKSFTAAERFFDKIVDRDLSSWATIISAY 155
Query: 251 GQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFI 310
+ G +EAV +F M GI P+ ++I S A+ + L+ G Q H + + + I
Sbjct: 156 TEEGRIDEAVGLFLRMLDLGIIPNFSIFSTLIMSFADPSMLDLGKQIHSQLIRIEFAADI 215
Query: 311 TVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH 370
++ + Y KCG ++ + N+M + V+ T L+ GY + + + + LF KM+S
Sbjct: 216 SIETLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLMVGYTQAARNRDALLLFSKMISE 275
Query: 371 GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEE 430
G++ D +L AC+ G + G+ +K G+ T ++D + R E
Sbjct: 276 GVELDGFVFSIILKACAALGDLYTGKQIHSYCIK-LGLESEVSVGTPLVDFYVKCARFEA 334
Query: 431 AKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYAS 490
A+ + P D W+ L++ Y
Sbjct: 335 ARQAFESIHEPND-FSWSALIAG----------------------------------YCQ 359
Query: 491 KGKWDHVSQLRRTMREKGV 509
GK+D ++ +T+R KGV
Sbjct: 360 SGKFDRALEVFKTIRSKGV 378
>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 923
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 240/648 (37%), Positives = 367/648 (56%), Gaps = 32/648 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +SWN +IS + S +A++ +L+ G + +TFS+ L SS +
Sbjct: 307 MSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMN 366
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR IH IL+ + + +G+ L+ MY+K + D +R F+ +P ++V N + G
Sbjct: 367 GRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAA 426
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
V + R+F SW MR G+ + T ++
Sbjct: 427 LEDVANAMRVF---------SW----------------------MRGTGIKPNYITMINL 455
Query: 181 LTACGGLLALEE-GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
C L L G +HA++ + + ++ ++L+ MY C ++ + +F + K+
Sbjct: 456 QGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKS 515
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
V+SW A++ ++G EEA+K+F + Q G + D F L +SS ANLASLEEG Q HG
Sbjct: 516 VISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHG 575
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
S+ GL V NA + YGKCG ++ + + R W L+SGYA++G E
Sbjct: 576 LSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKE 635
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
D F+ M+S G KPD VT + +LSACS AGL++KG Y+ M +G+ P H C++
Sbjct: 636 AEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIV 695
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L R G+ EA+ FI++MP P+ + W +LLSS R H N++IG+ AA++LLELDP++ +
Sbjct: 696 DLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDS 755
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+YVLLS++YA+ +W V +LR M+ + K P CSW+K K+ V F D S ++++
Sbjct: 756 AYVLLSNLYATNARWVDVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEK 815
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY +L+++ K+ + GYV D SS LHD + +K L +HSEKLA+A+GLL +P G IR
Sbjct: 816 IYVKLDEILLKLREVGYVADTSSALHDTDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIR 875
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ KNLRVC+DCH K +S + REI++RD RFH FK+G CSC DFW
Sbjct: 876 IFKNLRVCADCHLVFKLVSMVFHREIVLRDPYRFHQFKHGSCSCSDFW 923
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 188/382 (49%), Gaps = 12/382 (3%)
Query: 134 MKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC---GGLLAL 190
M + S SW T ++G + GLE A L R MR + + F S++TAC G
Sbjct: 1 MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60
Query: 191 EEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGY 250
G IHA R NV++G+AL+ +Y + A+ +F M +NVVSWTA++V
Sbjct: 61 ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVAL 120
Query: 251 GQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFI 310
NGC EEA+ + M++ G+ + L +V+S C L G Q +V+GL++ +
Sbjct: 121 SSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHV 180
Query: 311 TVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH 370
+V+N+L+T +G ++D+ RLF+ M RD +SW A++S Y+ ++ + M
Sbjct: 181 SVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHG 240
Query: 371 GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEE 430
+KPD TL ++S C+ + LV G + V G+ ++++ S AG+L+E
Sbjct: 241 EVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSS-GLHCSVPLINALVNMYSTAGKLDE 299
Query: 431 AKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYAS 490
A+S M D I W T++SS + LL+ D P S S++ A
Sbjct: 300 AESLFRNMS-RRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGAC 358
Query: 491 -------KGKWDHVSQLRRTMR 505
G+ H L+R+++
Sbjct: 359 SSPEALMNGRTIHAMILQRSLQ 380
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/464 (25%), Positives = 210/464 (45%), Gaps = 38/464 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW ++ +S+G + +A+ Y M K+G+ + +T++ + +
Sbjct: 105 MPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGV-MCNANALATVVSLCGALEDEVA 163
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+ H++ G ++V V + L+ M+ G LR
Sbjct: 164 GLQVTAHVVVSGLLTHVSVANSLITMF-----------------------------GNLR 194
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
R V+++ RLF M+++D ISW MI+ + + + +MR + D T S+
Sbjct: 195 R--VQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSL 252
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
++ C + G IH+ + + +V + +ALV+MY + AES+FR M+ ++V
Sbjct: 253 VSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDV 312
Query: 241 VSWTAMLVGYGQ-NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+SW M+ Y Q N C E + +Q + P+ T S + +C++ +L G H
Sbjct: 313 ISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHA 372
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
L L + + + N+L+T Y KC ++ED+ R+F M D VS L GYA
Sbjct: 373 MILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVAN 432
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--TC 417
+ +F M G+KP+ +T+I + C G + V + G+ + D Y
Sbjct: 433 AMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGL--LSDEYITNS 490
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+I + + G LE + +++ I W ++++ HG E
Sbjct: 491 LITMYATCGDLESSTGIFSRIN-NKSVISWNAIIAANVRHGRGE 533
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 196/443 (44%), Gaps = 37/443 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSR---RC 57
MP SW +SG A G + A + +M + + LS ++++ R
Sbjct: 1 MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVP-LSGFALASLVTACEHRGWQEG 59
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
G IH + G V++G+ L+ +Y
Sbjct: 60 AACGAAIHALTHRAGLMGNVYIGTALLHLYGS---------------------------- 91
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
RGLV ++RLF M ++ +SWT ++ L NG EA+ +R MR EG+ +
Sbjct: 92 ---RGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNANAL 148
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
+V++ CG L G Q+ A ++ + +V V ++L+ M+ + ++ AE +F M
Sbjct: 149 ATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEE 208
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
++ +SW AM+ Y + + +M+ ++PD TL S++S CA+ + G+
Sbjct: 209 RDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGI 268
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H + +GL + + NALV Y G ++++ LF M+ RD +SW ++S Y +
Sbjct: 269 HSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSC 328
Query: 358 NETIDLFEKML-SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
E ++ ++L + P+ +T L ACS + GR M+ + ++ +
Sbjct: 329 VEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGR-TIHAMILQRSLQNVLLIGN 387
Query: 417 CMIDILSRAGRLEEAKSFINKMP 439
++ + S+ +E+ + MP
Sbjct: 388 SLLTMYSKCNSMEDTERVFESMP 410
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 242/644 (37%), Positives = 357/644 (55%), Gaps = 41/644 (6%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRC---VDLGRQIH 65
+N LI G S+ + DAV VY M + G + F+ ++ + R +G +H
Sbjct: 69 YNTLIRGMVSNDAFRDAVSVYASMRQHGF---APDNFTFPFVLKACTRLPHYFHVGLSLH 125
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
++K GF VFV + LV +Y+K G + DA
Sbjct: 126 SLVIKTGFDWDVFVKTGLVCLYSKNGFLTDA----------------------------- 156
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
R++F + +K+ +SWT +I G +++G EA+ LFR + GL D FT +L AC
Sbjct: 157 --RKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACS 214
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
+ L G+ I ++ + NVFV ++LVDMY KC S++ A VF M K+VV W+A
Sbjct: 215 RVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSA 274
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
++ GY NG +EA+ +F MQR + PD + + V S+C+ L +LE G R L+ G
Sbjct: 275 LIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNW--ARGLMDG 332
Query: 306 --LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
+S + AL+ FY KCG++ + +F M +D V + A++SG A G +
Sbjct: 333 DEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGV 392
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F +M+ G++PD T +G+L C+ AGLV+ G YF M + + P +HY CM+D+ +
Sbjct: 393 FGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQA 452
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
RAG L EA+ I MP ++I W LL CR+H + ++ + + L+EL+P+N YVL
Sbjct: 453 RAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLIELEPWNSGHYVL 512
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LS+IY++ +WD ++R ++ +KG++K PGCSW++ VH F D S P S +IY +
Sbjct: 513 LSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSHKIYEK 572
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
LE L + + + GY P VL DVE EK L HSEKLA+AF L+ IRVVKN
Sbjct: 573 LESLFKDLREAGYNPTTEFVLFDVEEEEKEYFLGCHSEKLAVAFALISTGAKDVIRVVKN 632
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LRVC DCH A K +SK+T REI+VRD RFH F G CSC D+W
Sbjct: 633 LRVCGDCHEAIKLVSKVTGREIIVRDNNRFHHFTEGSCSCRDYW 676
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/402 (30%), Positives = 195/402 (48%), Gaps = 36/402 (8%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+Q H +L+ G ++ + L+ A F + P NI +YNT+I
Sbjct: 19 AKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLI----- 73
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
RGM D+ R+A+ ++ MR G A D FTF V
Sbjct: 74 -----------RGMVSNDAF---------------RDAVSVYASMRQHGFAPDNFTFPFV 107
Query: 181 LTACGGLL-ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
L AC L G +H+ +I+ +VFV + LV +Y K + A VF + KN
Sbjct: 108 LKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKN 167
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VVSWTA++ GY ++GC EA+ +F + G+ PD FTL ++ +C+ + L G G
Sbjct: 168 VVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDG 227
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+G + + V+ +LV Y KCG++E++ R+F+ M +D V W+AL+ GYA G E
Sbjct: 228 YMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKE 287
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM-VKEYGIRPIHDHYTCM 418
+D+F +M ++PD ++GV SACSR G +E G +M E+ P+ T +
Sbjct: 288 ALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLG--TAL 345
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
ID ++ G + +AK M D + + ++S + G+V
Sbjct: 346 IDFYAKCGSVAQAKEVFKGMR-RKDCVVFNAVISGLAMCGHV 386
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 165/369 (44%), Gaps = 41/369 (11%)
Query: 178 GSVLTAC--GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
GS L C GL +L + KQ H ++R + ++ + L+ + +YA VF
Sbjct: 2 GSELKKCFAWGLKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQT 61
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS-LEEG 294
N+ + ++ G N +AV ++ +M+++G PD+FT V+ +C L G
Sbjct: 62 PHPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVG 121
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
H + TG + V LV Y K G + D+ ++F+E+ ++ VSWTA++ GY +
Sbjct: 122 LSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIES 181
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G E + LF +L GL+PD TL+ +L ACSR G + GR + + ++E G
Sbjct: 182 GCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGR-WIDGYMRESGSVGNVFV 240
Query: 415 YTCMIDILSRAGRLEEAKSFI--------------------NKMP--------------F 440
T ++D+ ++ G +EEA+ N MP
Sbjct: 241 ATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENV 300
Query: 441 PPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY--NPASYVLLSSIYASKGKWDHVS 498
PD + S+C G +E+G W A L++ D + NP L YA G
Sbjct: 301 RPDCYAMVGVFSACSRLGALELGNW-ARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAK 359
Query: 499 QLRRTMREK 507
++ + MR K
Sbjct: 360 EVFKGMRRK 368
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 48/222 (21%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRR--CVDLGR 62
D V W+ LI G+AS+G +A+ V+ M ++ N+ ++ + + S+ R ++LG
Sbjct: 268 DVVCWSALIQGYASNGMPKEALDVFFEMQRE---NVRPDCYAMVGVFSACSRLGALELGN 324
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL---- 118
G + F S +G+ L+D YAK G + AK F + K+ V++N +I+GL
Sbjct: 325 WARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCG 384
Query: 119 -------------------------------LRRGLVEESRRLFRGMKDKDSISWTTMIT 147
GLV++ R F GM S++ T
Sbjct: 385 HVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHY 444
Query: 148 GLM-----QNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
G M + GL EA DL R M +E + +G++L C
Sbjct: 445 GCMVDLQARAGLLVEAQDLIRSMPMEA---NSIVWGALLGGC 483
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 243/652 (37%), Positives = 365/652 (55%), Gaps = 37/652 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V+WN +++G+A+HG + A+ M G + T ++L + + +
Sbjct: 161 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQ 220
Query: 61 GRQIHGHILKFGFGS---YVFVGSPLVDMYAKLG-LIYDAKRGFDELPEKNIVMYNTMIT 116
G IH + L+ V +G+ L+DMYAK L+Y
Sbjct: 221 GTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYAC-------------------- 260
Query: 117 GLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLA-MDQF 175
R+F GM ++ ++W+ +I G + EA +LF++M +EGL +
Sbjct: 261 ------------RVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSAT 308
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
+ S L C L L G Q+HA I ++ ++ ++L+ MY K I A F +
Sbjct: 309 SVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEI 368
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
A K+ +S+ A+L G QNG +EEA +F MQ +EPD T+ S+I +C++LA+L+ G
Sbjct: 369 AVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGK 428
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
HG ++ GL ++ N+L+ Y KCG I+ S ++F++M RD VSW +++GY G
Sbjct: 429 CSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHG 488
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
E LF M + G PD+VT I +++ACS +GLV +G+H+F+ M +YGI P +HY
Sbjct: 489 LGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHY 548
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
CM+D+L+R G L+EA FI MP D W LL +CRIH N+++GK + + +L P
Sbjct: 549 ICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGP 608
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSP 535
++VLLS+I+++ G++D +++R + KG +K PG SWI+ +H F D S P
Sbjct: 609 EGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHP 668
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
S IY EL+ + + K GY D S VL D+E EK K L +HSEKLAIAFG+L +
Sbjct: 669 CSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNED 728
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
I V KNLRVC DCH A KY++ + R I+VRD RFH FKNG+CSCG+FW
Sbjct: 729 KTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 132/476 (27%), Positives = 237/476 (49%), Gaps = 42/476 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D ++N LI ++ G + A+ +Y ML+ + ++ TF +L S+ +
Sbjct: 60 IPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAP-NKYTFPFVLKACSALVDLRA 118
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR IH H G + +FV + L+D+Y + A+ F ++P +++V +N M+ G
Sbjct: 119 GRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYAN 178
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G+ + M+D GL + T S+
Sbjct: 179 HGMYHHAIAHLLDMQDHG------------------------------GLRPNASTLVSL 208
Query: 181 LTACGGLLALEEGKQIHAFIIR---NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
L AL +G IHA+ +R +++ V +G+AL+DMY KCK + YA VF M
Sbjct: 209 LPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPV 268
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFT-LGSVISSCANLASLEEGTQ 296
+N V+W+A++ G+ EA +F +M G+ T + S + CA+LA L GTQ
Sbjct: 269 RNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQ 328
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H +G+ + +T SN+L++ Y K G I ++ F+E+ V+D +S+ AL+SG + GK
Sbjct: 329 LHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGK 388
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR-HYFEIMVKEYGIRPIHDHY 415
A E +F+KM + ++PD T++ ++ ACS ++ G+ + ++++ G+
Sbjct: 389 AEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIR--GLALETSIC 446
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL 471
+ID+ ++ G+++ ++ +KMP D + W T+++ IHG +GK A L
Sbjct: 447 NSLIDMYAKCGKIDLSRQVFDKMP-ARDVVSWNTMIAGYGIHG---LGKEATTLFL 498
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 172/348 (49%), Gaps = 7/348 (2%)
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+ RG + +R++F + D+ ++ +I G AIDL+R M +A +++TF
Sbjct: 45 ISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFP 104
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
VL AC L+ L G+ IHA ++FV +AL+D+Y +C A +VF M +
Sbjct: 105 FVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMR 164
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQ-RNGIEPDDFTLGSVISSCANLASLEEGTQF 297
+VV+W AML GY +G A+ +MQ G+ P+ TL S++ A +L +GT
Sbjct: 165 DVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSI 224
Query: 298 HG---RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
H R+ + + + AL+ Y KC + + R+F+ M VR++V+W+AL+ G+
Sbjct: 225 HAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLC 284
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIG-VLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
+ E +LF+ ML GL T + L C+ + G ++ K GI
Sbjct: 285 DRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKS-GIHADLT 343
Query: 414 HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
++ + ++AG + EA F +++ D I + LLS C +G E
Sbjct: 344 ASNSLLSMYAKAGLINEATMFFDEIAV-KDTISYGALLSGCVQNGKAE 390
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/632 (36%), Positives = 375/632 (59%), Gaps = 36/632 (5%)
Query: 18 SHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYV 77
S S ++++K + L+ + R ++T+L + + + GR +HGH+++ F +
Sbjct: 27 SEDSDDESLKFPSNDLEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDL 86
Query: 78 FVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDK 137
+ + L++MYAK G +EE+R++F M ++
Sbjct: 87 VMNNTLLNMYAKC-------------------------------GSLEEARKVFDKMPER 115
Query: 138 DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIH 197
D ++WTT+I+G Q+ +A+ LF +M G + ++FT SV+ A G Q+H
Sbjct: 116 DFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLH 175
Query: 198 AFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSE 257
F ++ NV VGSAL+D+Y + + A+ VF + +N VSW A++ G+ + +E
Sbjct: 176 GFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTE 235
Query: 258 EAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG--LISFITVSNA 315
+A+++F M R G P F+ S+ +C++ LE+G H + +G L++F N
Sbjct: 236 KALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF--AGNT 293
Query: 316 LVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPD 375
L+ Y K G+I D+ ++F+ + RD VSW +L++ YA+ G NE + FE+M G++P+
Sbjct: 294 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPN 353
Query: 376 EVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFI 435
E++ + VL+ACS +GL+++G HY+E+M K+ GI HY ++D+L RAG L A FI
Sbjct: 354 EISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVLEAWHYVTIVDLLGRAGDLNRALRFI 412
Query: 436 NKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWD 495
+MP P A W LL++CR+H N E+G +AAE + ELDP +P +V+L +IYAS G+W+
Sbjct: 413 EEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWN 472
Query: 496 HVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEG 555
+++R+ M+E GV+K+P CSW++ ++ +H+F A+D P ++I + E++ K+ + G
Sbjct: 473 DAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELG 532
Query: 556 YVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATK 615
YVPD S V+ V+ E+ L +HSEK+A+AF LL PPG I + KN+RVC DCH+A K
Sbjct: 533 YVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHSAIK 592
Query: 616 YISKITQREILVRDAVRFHLFKNGECSCGDFW 647
SK REI+VRD RFH FK+G CSC D+W
Sbjct: 593 LASKAVGREIIVRDTNRFHHFKDGACSCKDYW 624
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 182/351 (51%), Gaps = 33/351 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V+W LISG++ H DA+ ++N ML+ G + T S+++ +++ R
Sbjct: 112 MPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSP-NEFTLSSVIKAAAAERRGCC 170
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+HG +K GF S V VGS L+D+Y + GL+ DA+ FD L +N V +N +I G R
Sbjct: 171 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 230
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
R E++ LF+GM +R EG F++ S+
Sbjct: 231 RCGTEKALELFQGM------------------------------LR-EGFRPSHFSYASL 259
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
AC LE+GK +HA++I++ K F G+ L+DMY K SI A +F +A ++V
Sbjct: 260 FGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDV 319
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW ++L Y Q+G EAV F M+R GI P++ + SV+++C++ L+EG ++
Sbjct: 320 VSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYEL 379
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSG 350
G++ +V G+ G++ + R EM + + W AL++
Sbjct: 380 MKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 430
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 243/652 (37%), Positives = 365/652 (55%), Gaps = 37/652 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V+WN +++G+A+HG + A+ M G + T ++L + + +
Sbjct: 161 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQ 220
Query: 61 GRQIHGHILKFGFGS---YVFVGSPLVDMYAKLG-LIYDAKRGFDELPEKNIVMYNTMIT 116
G IH + L+ V +G+ L+DMYAK L+Y
Sbjct: 221 GTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYAC-------------------- 260
Query: 117 GLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLA-MDQF 175
R+F GM ++ ++W+ +I G + EA +LF++M +EGL +
Sbjct: 261 ------------RVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSAT 308
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
+ S L C L L G Q+HA I ++ ++ ++L+ MY K I A F +
Sbjct: 309 SVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEI 368
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
A K+ +S+ A+L G QNG +EEA +F MQ +EPD T+ S+I +C++LA+L+ G
Sbjct: 369 AVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGK 428
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
HG ++ GL ++ N+L+ Y KCG I+ S ++F++M RD VSW +++GY G
Sbjct: 429 CSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHG 488
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
E LF M + G PD+VT I +++ACS +GLV +G+H+F+ M +YGI P +HY
Sbjct: 489 LGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHY 548
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
CM+D+L+R G L+EA FI MP D W LL +CRIH N+++GK + + +L P
Sbjct: 549 ICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGP 608
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSP 535
++VLLS+I+++ G++D +++R + KG +K PG SWI+ +H F D S P
Sbjct: 609 EGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHP 668
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
S IY EL+ + + K GY D S VL D+E EK K L +HSEKLAIAFG+L +
Sbjct: 669 CSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNED 728
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
I V KNLRVC DCH A KY++ + R I+VRD RFH FKNG+CSCG+FW
Sbjct: 729 KTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 132/476 (27%), Positives = 237/476 (49%), Gaps = 42/476 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D ++N LI ++ G + A+ +Y ML+ + ++ TF +L S+ +
Sbjct: 60 IPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAP-NKYTFPFVLKACSALVDLRA 118
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR IH H G + +FV + L+D+Y + A+ F ++P +++V +N M+ G
Sbjct: 119 GRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYAN 178
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G+ + M+D GL + T S+
Sbjct: 179 HGMYHHAIAHLLDMQDHG------------------------------GLRPNASTLVSL 208
Query: 181 LTACGGLLALEEGKQIHAFIIR---NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
L AL +G IHA+ +R +++ V +G+AL+DMY KCK + YA VF M
Sbjct: 209 LPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPV 268
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFT-LGSVISSCANLASLEEGTQ 296
+N V+W+A++ G+ EA +F +M G+ T + S + CA+LA L GTQ
Sbjct: 269 RNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQ 328
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H +G+ + +T SN+L++ Y K G I ++ F+E+ V+D +S+ AL+SG + GK
Sbjct: 329 LHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGK 388
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR-HYFEIMVKEYGIRPIHDHY 415
A E +F+KM + ++PD T++ ++ ACS ++ G+ + ++++ G+
Sbjct: 389 AEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIR--GLALETSIC 446
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL 471
+ID+ ++ G+++ ++ +KMP D + W T+++ IHG +GK A L
Sbjct: 447 NSLIDMYAKCGKIDLSRQVFDKMP-ARDVVSWNTMIAGYGIHG---LGKEATTLFL 498
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 172/348 (49%), Gaps = 7/348 (2%)
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+ RG + +R++F + D+ ++ +I G AIDL+R M +A +++TF
Sbjct: 45 ISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFP 104
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
VL AC L+ L G+ IHA ++FV +AL+D+Y +C A +VF M +
Sbjct: 105 FVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMR 164
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQ-RNGIEPDDFTLGSVISSCANLASLEEGTQF 297
+VV+W AML GY +G A+ +MQ G+ P+ TL S++ A +L +GT
Sbjct: 165 DVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSI 224
Query: 298 HG---RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
H R+ + + + AL+ Y KC + + R+F+ M VR++V+W+AL+ G+
Sbjct: 225 HAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLC 284
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIG-VLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
+ E +LF+ ML GL T + L C+ + G ++ K GI
Sbjct: 285 DRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKS-GIHADLT 343
Query: 414 HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
++ + ++AG + EA F +++ D I + LLS C +G E
Sbjct: 344 ASNSLLSMYAKAGLINEATMFFDEIAV-KDTISYGALLSGCVQNGKAE 390
>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
Length = 879
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 247/638 (38%), Positives = 380/638 (59%), Gaps = 34/638 (5%)
Query: 12 LISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKF 71
+I+ + ++A++++ +ML +G+ L RI +L S R ++ GR IHG + +
Sbjct: 274 MITQYTQRERWDEALELFKVMLLEGV-KLDRIACMAVLNACSGPRGLEEGRIIHGFMREI 332
Query: 72 GFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLF 131
F +V G+ L++MY K G + EE+ +F
Sbjct: 333 RFDRHVNAGNALINMYGKCGSL-------------------------------EEAVEVF 361
Query: 132 RGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALE 191
R M+ +D ISW T+I Q+ EA+ L M+L+G+ D+ +F + L C AL
Sbjct: 362 RSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEALA 421
Query: 192 EGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYG 251
+G+ IH++I+ + K +V + +A++DMY CKS A VFR M ++ VSW AM+ Y
Sbjct: 422 KGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMITAYA 481
Query: 252 -QNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFI 310
Q S EA+ +F MQ +G PD + + +S+CA ASL EG H R TGL S +
Sbjct: 482 AQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNM 541
Query: 311 TVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH 370
TV+NA++ Y K G + + ++F +M + D +SW ++S +A+ G A++ + F +M
Sbjct: 542 TVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHE 601
Query: 371 GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY-GIRPIHDHYTCMIDILSRAGRLE 429
G P++VT + V+SACS GLV+ G F ++ ++ I P +HY CM+D+++RAG+L+
Sbjct: 602 GKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLD 661
Query: 430 EAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYA 489
A+ FI P PD + +T+L + ++H +VE + +AE L+EL P A+YV+LS++Y
Sbjct: 662 AAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYD 721
Query: 490 SKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNR 549
GK D +++RR M EK +RK+P S I K RVH F D ++ + +I ELE+L+
Sbjct: 722 EVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPEILEELERLSL 781
Query: 550 KMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSD 609
+M K GY PD + +LHDV +K ++L++HSEKLAIAFGL+ PG +R++KNLRVC D
Sbjct: 782 EMAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTSLRIIKNLRVCGD 841
Query: 610 CHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
CH ATK+ISKIT REI+VRD+ RFH F NG CSCGD+W
Sbjct: 842 CHTATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 132/464 (28%), Positives = 230/464 (49%), Gaps = 50/464 (10%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI-- 64
V WN +I+ +A A++V+ ML +G+ RITF +L S + +++ + +
Sbjct: 167 VEWNAMITAYAQQDHHEQAIQVFYAMLLEGV-KAERITFIGVLDACSKLKDLEVAKLVKL 225
Query: 65 ------HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
H H+ F + LV+ Y G + A R F
Sbjct: 226 CVEEREHDHLHDSSFAT------ALVNFYGSCGDLEQAFRAFSR---------------- 263
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
RL + I T MIT Q EA++LF+ M LEG+ +D+
Sbjct: 264 ---------HRL-------ELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACM 307
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
+VL AC G LEEG+ IH F+ +V G+AL++MY KC S++ A VFR+M +
Sbjct: 308 AVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHR 367
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+V+SW ++ +GQ+ EA+ + MQ +G++ D + + + CA +L +G H
Sbjct: 368 DVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRMIH 427
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK-A 357
+ +G+ + + + NA++ YG C + +D+ R+F M VRD+VSW A+++ YA + +
Sbjct: 428 SWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMITAYAAQPRLS 487
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
+E + LF++M HG PD ++ + LSAC+ + +G+ ++E G+
Sbjct: 488 SEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGK-LLHDRIRETGLESNMTVANA 546
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
++++ +++G L A+ KMP PD I W ++S+ HG+ +
Sbjct: 547 VLNMYAKSGTLVLARKMFGKMPL-PDVISWNGMISAFAQHGHAD 589
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 199/422 (47%), Gaps = 57/422 (13%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
++ +L + + R +DLG+++H I K F+G LV MY G + DAK FD +P
Sbjct: 1 YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
++ + + +I G + +S +A+ LFR
Sbjct: 61 VQDALTWARLIRA---HGQIGDS----------------------------EQALHLFRS 89
Query: 165 MRLEGLAMDQFTFGSVLTACGG-LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
M+LEG+A F +VL AC LEEG++IH + + + +V + L+ MY KC
Sbjct: 90 MQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCS 149
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
S++ A VF + K VV W AM+ Y Q E+A+++F M G++ + T V+
Sbjct: 150 SVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLD 209
Query: 284 SCANLASLE------------EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHR 331
+C+ L LE E H S T ALV FYG CG++E + R
Sbjct: 210 ACSKLKDLEVAKLVKLCVEEREHDHLHDSSFAT----------ALVNFYGSCGDLEQAFR 259
Query: 332 LFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGL 391
F+ + + + TA+++ Y + + +E ++LF+ ML G+K D + + VL+ACS
Sbjct: 260 AFSRHRL-ELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRG 318
Query: 392 VEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
+E+GR M + R + + +I++ + G LEEA M D I W T++
Sbjct: 319 LEEGRIIHGFMREIRFDRHV-NAGNALINMYGKCGSLEEAVEVFRSMQH-RDVISWNTII 376
Query: 452 SS 453
++
Sbjct: 377 AA 378
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 204/455 (44%), Gaps = 36/455 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D ++W LI H G A+ ++ M +G+ ++R + + S+ ++
Sbjct: 59 MPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEE 118
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR+IHG + S +V + L+ MY K + DA++ FD + K +V +N M
Sbjct: 119 GRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAM------ 172
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
IT Q +AI +F M LEG+ ++ TF V
Sbjct: 173 -------------------------ITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGV 207
Query: 181 LTACGGLLALEEGKQIHAFI--IRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
L AC L LE K + + +DH + +ALV+ Y C ++ A F +
Sbjct: 208 LDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDLEQAFRAFSRHRLE 267
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+++ TAM+ Y Q +EA+++F M G++ D +V+++C+ LEEG H
Sbjct: 268 LILA-TAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRIIH 326
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G + NAL+ YGKCG++E++ +F M RD +SW +++ + + +
Sbjct: 327 GFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHP 386
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
E + L M G+K D+++ + L C+ + + KGR +V E GI+ +
Sbjct: 387 EALHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRMIHSWIV-ESGIKADVMLDNAI 445
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+D+ ++A M D + W ++++
Sbjct: 446 LDMYGSCKSTDDASRVFRAMKV-RDQVSWNAMITA 479
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 241/649 (37%), Positives = 370/649 (57%), Gaps = 37/649 (5%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNL--SRITFSTMLIMSSSRRCVD 59
P + VSW +LISG A + +A+ V+ M +GN + +T S++L ++ +
Sbjct: 83 PCKNVVSWTILISGLAKNDCFVEAIDVFREMT---MGNFKPNAVTISSVLPAFANLGLIR 139
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+ + +H ++ GF VFV + LVDMY+K G + A
Sbjct: 140 IAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVA----------------------- 176
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
R+LF M +++ +SW +++G +G EAIDLF MR +GL +D +T S
Sbjct: 177 --------RQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMS 228
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
++ A + L+ G IH FIIR ++++ + +AL+D+Y + A VF M K+
Sbjct: 229 LIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKD 288
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQR-NGIEPDDFTLGSVISSCANLASLEEGTQFH 298
V +WT ML G+ + A+K F M ++ D L ++SSC++ +L++G + H
Sbjct: 289 VAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVH 348
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
++ T + I V +A++ Y CGN+ED+ R F M +D V W A+++G G
Sbjct: 349 ALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGT 408
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
+ IDLF +M GL PDE T + VL ACS AG+V +G F MVK P HY C+
Sbjct: 409 DAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACV 468
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
IDIL RAG+L+ A SFIN MPF PD ++TLL +CRIHGN+++G ++ + E++P +
Sbjct: 469 IDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDA 528
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
YVLLS++YA G W+ V R ++R K ++KDPG S I+ ++ F A + P
Sbjct: 529 GYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGFSSIEINQEIYTFMAGEKDHPQYF 588
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
+I L+ L K+ K GYVP+ + +L DV K +L HHSEK+AIAFGL+ PG I
Sbjct: 589 KIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPGTII 648
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R+ KNLR C+DCH+A+K++SK+ R ++++DA RFH+F++G CSC D+W
Sbjct: 649 RITKNLRTCNDCHSASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRDYW 697
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/386 (32%), Positives = 212/386 (54%), Gaps = 8/386 (2%)
Query: 107 NIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR 166
N + N+++ + GL+ +++++F K+ +SWT +I+GL +N EAID+FREM
Sbjct: 55 NTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMT 114
Query: 167 LEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIK 226
+ + T SVL A L + K +H F +R + NVFV +ALVDMY K +
Sbjct: 115 MGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMG 174
Query: 227 YAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCA 286
A +F +M+ +NVVSW A++ GY +G SEEA+ +F M+R G+ D +T+ S+I +
Sbjct: 175 VARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASL 234
Query: 287 NLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTA 346
++ L+ GT HG + TG + + AL+ Y ++D+HR+F+EM V+D +WT
Sbjct: 235 SVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTL 294
Query: 347 LVSGYAKFGKANETIDLFEKMLS-HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE 405
+++G++ + I F KML LK D + L+G+LS+CS +G +++GR + +K
Sbjct: 295 MLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKT 354
Query: 406 YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKW 465
I + +ID+ + G LE+AK F M D + W +++ ++G G
Sbjct: 355 CFANNIFVG-SAVIDMYANCGNLEDAKRFFYGMG-EKDVVCWNAMIAGNGMNG---YGTD 409
Query: 466 AAESLLEL--DPYNPASYVLLSSIYA 489
A + L++ +P +S +YA
Sbjct: 410 AIDLFLQMKGSGLDPDESTFVSVLYA 435
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 130/263 (49%), Gaps = 2/263 (0%)
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
L+ +QIHA II + N F+ ++L++ Y C + A+ +F KNVVSWT ++ G
Sbjct: 37 LKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISG 96
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
+N C EA+ +F M +P+ T+ SV+ + ANL + H + G
Sbjct: 97 LAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGN 156
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
+ V ALV Y K G + + +LF M+ R+ VSW A+VSGY+ G + E IDLF M
Sbjct: 157 VFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRR 216
Query: 370 HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLE 429
GL D T++ ++ A G ++ G +++ G T ++DI ++
Sbjct: 217 KGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRT-GYENDKHIKTALMDIYVSHNCVD 275
Query: 430 EAKSFINKMPFPPDAIGWATLLS 452
+A ++M F D W +L+
Sbjct: 276 DAHRVFSEM-FVKDVAAWTLMLT 297
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
L L+ Q H + + +GL +SN+L+ Y CG + D+ ++F+ ++ VSWT L
Sbjct: 34 LKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTIL 93
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVE--KGRHYFEIMVKE 405
+SG AK E ID+F +M KP+ VT+ VL A + GL+ K H F +
Sbjct: 94 ISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGF 153
Query: 406 YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
G + T ++D+ S+ G + A+ M + + W ++S HG E
Sbjct: 154 EGNVFVE---TALVDMYSKFGCMGVARQLFESMS-ERNVVSWNAIVSGYSDHGFSE 205
>gi|358345892|ref|XP_003637008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502943|gb|AES84146.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 251/664 (37%), Positives = 380/664 (57%), Gaps = 63/664 (9%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLM------LKDGLGNLSRITFSTMLIMSSSRRCVDL 60
VSWN ++S ++ NDAV ++ M L D +G ++ + S L
Sbjct: 24 VSWNSIVSVYSHCFVPNDAVFLFREMTVGYGILPDTVGVVNILPVSGFL----------- 72
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GF FVG+ LVDMYAK G + DA + F+ + K++V +N M+TG +
Sbjct: 73 -----------GF----FVGNALVDMYAKCGKMEDASKVFERMRFKDVVTWNAMVTGYSQ 117
Query: 121 RGLVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
G E++ LF M+++ D ++W+++I+G Q G EA+D+FR+M + T
Sbjct: 118 NGRFEDALSLFGKMREEKIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVT 177
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIR-------NDHKDNVFVGSALVDMYCKCKSIKYAE 229
S+L+AC + AL GK+ H + ++ ND D++ V +AL+DMY KCKS++ A
Sbjct: 178 LMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVAR 237
Query: 230 SVFRTMAWKN--VVSWTAMLVGYGQNGCSEEAVKIFCNMQR--NGIEPDDFTLGSVISSC 285
++F + K+ VV+WT M+ GY Q+G + A+++F M + N I P+DFT+ V+ +C
Sbjct: 238 AMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMAC 297
Query: 286 ANLASLEEGTQFHGRSLVTGLIS--FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
A LA+L+ G Q H L I + V+N L+ Y K G+++ + +F+ M+ R+ VS
Sbjct: 298 ARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVS 357
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
WT+L++GY G A L D +T + VL ACS +G+V++G F M
Sbjct: 358 WTSLLTGYGMHGAA--------------LVLDGITFLVVLYACSHSGMVDRGIDLFYRMS 403
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
K++ + P +HY CM D+ RAGRL EA IN M P + W LLS+CR H N E+
Sbjct: 404 KDFVVDPGVEHYACMADLFGRAGRLCEATRLINDMSMEPTPVVWIALLSACRTHSNEELA 463
Query: 464 KWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSR 523
++AA+ LLEL N +Y LLS+IYA+ +W V+++R M+ G++K PG SW+K +
Sbjct: 464 EFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIRYLMKRTGIKKRPGWSWVKGRKG 523
Query: 524 VHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKL 583
+ F D + S +IY L L +++ GYVP + LHDV+ EK L HSEKL
Sbjct: 524 METFYVGDRTHLQSQKIYETLADLIKRIKAIGYVPQTNFSLHDVDDEEKGDQLLEHSEKL 583
Query: 584 AIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSC 643
A+A+ +L +PPG PIR+ KNLR+C D H+A YIS I + EI++RD+ RFH FKNG CSC
Sbjct: 584 ALAYAILTLPPGAPIRITKNLRICGDFHSAITYISMIVEHEIILRDSSRFHQFKNGSCSC 643
Query: 644 GDFW 647
+W
Sbjct: 644 KGYW 647
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 177/368 (48%), Gaps = 69/368 (18%)
Query: 139 SISWTTMITGLMQNGLEREAIDLFREMRL-EGLAMDQFTFGSVLTACGGLLALEEGKQIH 197
S+SW ++++ + +A+ LFREM + G+ D ++L G L
Sbjct: 23 SVSWNSIVSVYSHCFVPNDAVFLFREMTVGYGILPDTVGVVNILPVSGFL---------- 72
Query: 198 AFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSE 257
FVG+ALVDMY KC ++ A VF M +K+VV+W AM+ GY QNG E
Sbjct: 73 ----------GFFVGNALVDMYAKCGKMEDASKVFERMRFKDVVTWNAMVTGYSQNGRFE 122
Query: 258 EAVKIFCNMQRNGIE-----------------------------------PDDFTLGSVI 282
+A+ +F M+ IE P+ TL S++
Sbjct: 123 DALSLFGKMREEKIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLL 182
Query: 283 SSCANLASLEEGTQFHGRSLVTGL-------ISFITVSNALVTFYGKCGNIEDSHRLFNE 335
S+CA++ +L G + H S+ L + V NAL+ Y KC ++E + +F+E
Sbjct: 183 SACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDE 242
Query: 336 M--NVRDEVSWTALVSGYAKFGKANETIDLFEKM--LSHGLKPDEVTLIGVLSACSRAGL 391
+ RD V+WT ++ GYA+ G AN + LF +M + + + P++ T+ VL AC+R
Sbjct: 243 ICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAA 302
Query: 392 VEKGRHYFEIMVKEYGI-RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATL 450
++ G+ +++ I + C+ID+ S++G ++ A+ + M +A+ W +L
Sbjct: 303 LKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMS-KRNAVSWTSL 361
Query: 451 LSSCRIHG 458
L+ +HG
Sbjct: 362 LTGYGMHG 369
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 185/369 (50%), Gaps = 34/369 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSR----R 56
M F D V+WN +++G++ +G DA+ ++ M ++ + L +T+S+++ + R
Sbjct: 100 MRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKI-ELDVVTWSSVISGYAQRGFGCE 158
Query: 57 CVDLGRQIHGHILKFGFGSYVFVGSPLVD----MYAKLGLIYDAK---RGFDELPEKNIV 109
+D+ RQ+ G + + + + S ++ K Y K +G ++
Sbjct: 159 AMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLA 218
Query: 110 MYNTMITGLLRRGLVEESRRLFRGM--KDKDSISWTTMITGLMQNGLEREAIDLFREM-R 166
+ N +I + +E +R +F + KD+D ++WT MI G Q+G A+ LF EM +
Sbjct: 219 VINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFK 278
Query: 167 LEG-LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDN--VFVGSALVDMYCKCK 223
++ + + FT VL AC L AL+ GKQIHA+++R D+ +FV + L+DMY K
Sbjct: 279 IDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSG 338
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
+ A+ VF +M+ +N VSWT++L GYG +G + + D T V+
Sbjct: 339 DVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGAA--------------LVLDGITFLVVLY 384
Query: 284 SCANLASLEEGTQ-FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DE 341
+C++ ++ G F+ S + + + +G+ G + ++ RL N+M++
Sbjct: 385 ACSHSGMVDRGIDLFYRMSKDFVVDPGVEHYACMADLFGRAGRLCEATRLINDMSMEPTP 444
Query: 342 VSWTALVSG 350
V W AL+S
Sbjct: 445 VVWIALLSA 453
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/592 (38%), Positives = 346/592 (58%), Gaps = 70/592 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D +WN ++SG A H +A+ + +M K+G L+ +F+++L S ++
Sbjct: 112 MPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFV-LNEYSFASVLSACSGLNDMNK 170
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+H I K F S V++GS LVDMY+K G + DA+R FDE
Sbjct: 171 GVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDE------------------ 212
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
M D++ +SW ++IT QNG EA+D+F+ M + D+ T SV
Sbjct: 213 -------------MGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASV 259
Query: 181 LTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESVFRTM---- 235
++AC L A++ G+++H +++ND ++++ + +A VDMY KC IK A +F +M
Sbjct: 260 ISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRN 319
Query: 236 ---------------------------AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR 268
A +NVVSW A++ GY QNG +EEA+ +FC ++R
Sbjct: 320 VIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKR 379
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFH------GRSLVTGLISFITVSNALVTFYGK 322
+ P ++ +++ +CA+LA L G Q H G +G I V N+L+ Y K
Sbjct: 380 ESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVK 439
Query: 323 CGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGV 382
CG +E+ + +F +M RD VSW A++ G+A+ G NE ++LF +ML G KPD +T+IGV
Sbjct: 440 CGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGV 499
Query: 383 LSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPP 442
LSAC AG VE+GRHYF M +++G+ P+ DHYTCM+D+L RAG LEEAKS I +MP P
Sbjct: 500 LSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQP 559
Query: 443 DAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRR 502
D++ W +LL++C++H N+ +GK+ AE LLE++P N YVLLS++YA GKW+ V +R+
Sbjct: 560 DSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRK 619
Query: 503 TMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKE 554
+MR++GV K PGCSWIK + H+F D S P QI++ L+ L +M E
Sbjct: 620 SMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPE 671
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 134/430 (31%), Positives = 234/430 (54%), Gaps = 44/430 (10%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
R +H ++K GF + +F+ + L+D Y+K G + D ++ FD++P++NI +N+++TGL +
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G ++E+ LFR M ++D +W +M++G Q+ EA+ F M EG +++++F SVL
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+AC GL + +G Q+H+ I ++ +V++GSALVDMY KC ++ A+ VF M +NVV
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW +++ + QNG + EA+ +F M + +EPD+ TL SVIS+CA+L++++ G + HGR
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 302 LVTG-LISFITVSNALVTFYGKCGNIEDSHRLFNEMNV---------------------- 338
+ L + I +SNA V Y KC I+++ +F+ M +
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAA 339
Query: 339 ---------RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
R+ VSW AL++GY + G+ E + LF + + P + +L AC+
Sbjct: 340 RLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADL 399
Query: 390 GLVEKG--------RHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFP 441
+ G +H F+ E + + +ID+ + G +EE KM
Sbjct: 400 AELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNS---LIDMYVKCGCVEEGYLVFRKM-ME 455
Query: 442 PDAIGWATLL 451
D + W ++
Sbjct: 456 RDCVSWNAMI 465
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/623 (36%), Positives = 360/623 (57%), Gaps = 32/623 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V W ++S ++ + +A +V++ M G + +++L + V LG+ I
Sbjct: 227 DAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKP-NPFALTSVLKAAVCLPSVVLGKGI 285
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG +K + VG L+DMYAK G I DA+ F+ +P ++++
Sbjct: 286 HGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILL------------- 332
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ MI+ Q+ +A +LF + + ++++ SVL AC
Sbjct: 333 ------------------SFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQAC 374
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
++ L+ GKQIH I+ H+ ++FVG+AL+D Y KC + + +F ++ N VSW
Sbjct: 375 TNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWN 434
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++VG+ Q+G EEA+ +FC MQ + T SV+ +CA+ AS+ Q H +
Sbjct: 435 TIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKS 494
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
+ + N+L+ Y KCG I D+ ++F + RD +SW A++SGYA G+A + ++LF
Sbjct: 495 TFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELF 554
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
++M ++ +++T + +LS CS GLV G F+ M ++GI+P +HYTC++ +L R
Sbjct: 555 DRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGR 614
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AGRL +A FI +P P A+ W LLSSC IH NV +G+++AE +LE++P + +YVLL
Sbjct: 615 AGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLL 674
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S++YA+ G D V+ LR++MR GVRK PG SW++ K +H FS P I A L
Sbjct: 675 SNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAML 734
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
E LN K +EGY+PD++ VLHDV+ +K +ML HSE+LA+A+GL+ PPG PIR++KNL
Sbjct: 735 EWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNL 794
Query: 605 RVCSDCHNATKYISKITQREILV 627
R C DCH A ISKI +REI+V
Sbjct: 795 RSCLDCHTAFTVISKIVKREIIV 817
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 138/513 (26%), Positives = 241/513 (46%), Gaps = 49/513 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VS+ L+ HA G A ++ + +G +++ +TML ++ + L
Sbjct: 122 MPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEG-HEVNQFVLTTMLKLAIAMDAAGL 180
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+H K G FVGS L+D Y+ L+ DA+
Sbjct: 181 AGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEH---------------------- 218
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+F G+ KD++ WT M++ +N A +F +MR+ G + F SV
Sbjct: 219 ---------VFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSV 269
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A L ++ GK IH I+ + VG AL+DMY KC IK A F + + +V
Sbjct: 270 LKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDV 329
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+ + M+ Y Q+ +E+A ++F + R+ + P++++L SV+ +C N+ L+ G Q H
Sbjct: 330 ILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNH 389
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ G S + V NAL+ FY KC +++ S ++F+ + +EVSW +V G+++ G E
Sbjct: 390 AIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEA 449
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSAC-SRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ +F +M + + +VT VL AC S A + G+ + I + + + +I
Sbjct: 450 LSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGN--SLI 507
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D ++ G + +A + D I W ++S +HG AA++L D N +
Sbjct: 508 DTYAKCGYIRDALKVFQHL-MERDIISWNAIISGYALHGQ------AADALELFDRMNKS 560
Query: 480 -------SYVLLSSIYASKGKWDHVSQLRRTMR 505
++V L S+ +S G +H L +MR
Sbjct: 561 NVESNDITFVALLSVCSSTGLVNHGLSLFDSMR 593
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 119/462 (25%), Positives = 212/462 (45%), Gaps = 50/462 (10%)
Query: 61 GRQIHGHILKFG-FGSY-VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
GR +HGH+++ G G +F + L++MY KLG + A+R FD +PE+N+V + T++
Sbjct: 78 GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAH 137
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+RG E A LFR +R EG ++QF
Sbjct: 138 AQRGDFE-------------------------------AAAALFRRLRWEGHEVNQFVLT 166
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
++L + A +H+ + H N FVGS L+D Y C + AE VF + K
Sbjct: 167 TMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRK 226
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+ V WTAM+ Y +N C E A ++F M+ +G +P+ F L SV+ + L S+ G H
Sbjct: 227 DAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIH 286
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G ++ T + V AL+ Y KCG+I+D+ F + D + + ++S YA+ +
Sbjct: 287 GCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNE 346
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--- 415
+ +LF +++ + P+E +L VL AC+ ++ G+ + + I+ H+
Sbjct: 347 QAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQ-----IHNHAIKIGHESDLFV 401
Query: 416 -TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
++D ++ ++ + + + + + W T++ G +G+ A E+
Sbjct: 402 GNALMDFYAKCNDMDSSLKIFSSLR-DANEVSWNTIVVGFSQSG---LGEEALSVFCEMQ 457
Query: 475 PYN-PASYVLLSSIY---ASKGKWDHVSQLRRTMREKGVRKD 512
P + V SS+ AS H Q+ ++ + D
Sbjct: 458 AAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNND 499
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 172/352 (48%), Gaps = 36/352 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVY-NLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
+P+ D + + +IS +A A +++ LM L N + S++L ++ +D
Sbjct: 324 IPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPN--EYSLSSVLQACTNMVQLD 381
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G+QIH H +K G S +FVG+ L+D YAK + + + F L + N V +NT++ G
Sbjct: 382 FGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFS 441
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ GL E EA+ +F EM+ + Q T+ S
Sbjct: 442 QSGLGE-------------------------------EALSVFCEMQAAQMPCTQVTYSS 470
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL AC ++ QIH I ++ ++ +G++L+D Y KC I+ A VF+ + ++
Sbjct: 471 VLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERD 530
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQFH 298
++SW A++ GY +G + +A+++F M ++ +E +D T +++S C++ + G + F
Sbjct: 531 IISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFD 590
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM-NVRDEVSWTALVS 349
+ G+ + +V G+ G + D+ + ++ + + W AL+S
Sbjct: 591 SMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLS 642
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/621 (38%), Positives = 352/621 (56%), Gaps = 64/621 (10%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+Q+H HI + G FV + L+ KL + D
Sbjct: 56 KQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPY------------------------ 91
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
R +F+ ++ + WT +I G G E++ L+ MR +G+ FTF ++L
Sbjct: 92 -----PRLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALL 146
Query: 182 TACGGLLALEEGKQIHA-FIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM----- 235
AC L + G+Q+H I+ +++VG+ L+DMY KC + VF M
Sbjct: 147 KACSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDV 206
Query: 236 -AW-------------------------KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN 269
+W K++V+WTAM+ GY QN EA+++F MQ
Sbjct: 207 ISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAA 266
Query: 270 GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL--ISFITVSNALVTFYGKCGNIE 327
G++ D+ TL VIS+CA L + + + +G S + V +AL+ Y KCG++E
Sbjct: 267 GVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVE 326
Query: 328 DSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS 387
D++++F M R+ S+++++ G+A G A ++LF++ML +KP+ VT IGVL+ACS
Sbjct: 327 DAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACS 386
Query: 388 RAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGW 447
AG+VE+G+ F +M + +G+ P DHY CM+D+L RAGRLEEA + + MP P W
Sbjct: 387 HAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVW 446
Query: 448 ATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREK 507
LL +CRIHGN ++ + AA L EL+P +Y+LLS+IYAS G+WD VS++R+ MR K
Sbjct: 447 GALLGACRIHGNPDMAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAK 506
Query: 508 GVRKDPGCSWIK-YKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHD 566
G++K+PGCSW++ K +H F A D S P S +I LE L ++ GY P++SSV +D
Sbjct: 507 GLKKNPGCSWVEGKKGIIHEFFAGDMSHPKSREIKQALEDLLDRLKYLGYQPNLSSVAYD 566
Query: 567 VELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREIL 626
+ EK ++L HSEKLA+AFGLL G IR+VKNLR+C DCH+ S+IT REI+
Sbjct: 567 ISDEEKKRLLMSHSEKLALAFGLLTTNAGCTIRIVKNLRICEDCHSVMCGASQITGREIV 626
Query: 627 VRDAVRFHLFKNGECSCGDFW 647
VRD +RFH F++G CSCG+FW
Sbjct: 627 VRDNMRFHHFRDGRCSCGNFW 647
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/345 (33%), Positives = 192/345 (55%), Gaps = 6/345 (1%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH- 67
W LI G+A G ++V +YN M + G+G +S TF+ +L S+ V+LGRQ+H
Sbjct: 107 WTALIRGYALQGPFMESVLLYNSMRRQGIGPVS-FTFTALLKACSAALDVNLGRQVHTQT 165
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
IL GFGS ++VG+ L+DMY K G + R FDE+ +++++ + ++I + G +E +
Sbjct: 166 ILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAA 225
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
LF G+ KD ++WT M+TG QN REA+++F M+ G+ D+ T V++AC L
Sbjct: 226 SELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQL 285
Query: 188 LALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
A + + ++ NV VGSAL+DMY KC S++ A VF M +NV S+++
Sbjct: 286 GAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSS 345
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHGRSLVT 304
M+VG+ +G + A+++F M + I+P+ T V+++C++ +E+G Q F
Sbjct: 346 MIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECH 405
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALV 348
G+ +V G+ G +E++ L M + W AL+
Sbjct: 406 GVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALL 450
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 44/207 (21%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D V+W +++G+A + +A++V+ M G + + ++ C L
Sbjct: 232 LPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAG------VKTDEVTLVGVISACAQL 285
Query: 61 GRQIHGHILK-------FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNT 113
G + + ++ FG S V VGS L+DMYAK G + DA + F+ + E+N+ Y++
Sbjct: 286 GAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSS 345
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
MI G +GL A++LF EM + +
Sbjct: 346 MI-------------------------------VGFAMHGLAGAAMELFDEMLKTEIKPN 374
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFI 200
+ TF VLTAC +E+G+Q+ A +
Sbjct: 375 RVTFIGVLTACSHAGMVEQGQQLFAMM 401
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 249/649 (38%), Positives = 378/649 (58%), Gaps = 42/649 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D + N LI G++N A++V + N ++ T+ +++ + + + G +
Sbjct: 46 DSNNNNPLIQSLCKQGNLNQALQVLS-----QEPNPTQHTYELLILSCTRQNSLPQGIDL 100
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H H++ G F+ + L++MY++L I +A++ FD+ ++ I ++N
Sbjct: 101 HRHLIHDGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNA----------- 149
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
LFR L G RE +DL+R M G+ D+FT+ VL AC
Sbjct: 150 -----LFRA---------------LTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKAC 189
Query: 185 GGLLA----LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
A L G++IH I+R+ + +V + + L+DMY + + A VF M KNV
Sbjct: 190 VASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNV 249
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNM--QRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
VSW+AM+ Y +NG EA+++F M + + P+ T+ SV+ +CA LA+LE+G H
Sbjct: 250 VSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMH 309
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G L GL S + V +ALVT Y +CGN+E HR+F M RD VSW +L+S Y G
Sbjct: 310 GYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGR 369
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
+ I +F++M+ GL P ++ + VL ACS AGLVE+G+ FE MV+ + I P +HY CM
Sbjct: 370 KAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACM 429
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
+D+L RA RL+EA I+ M P W +LL SCRIH NVE+ + A L EL+P N
Sbjct: 430 VDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLLGSCRIHCNVELAERATSRLFELEPTNA 489
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
+YVLL+ IYA W+ V +++ + +G++K PG S I+ + +++ F + D +P +
Sbjct: 490 GNYVLLADIYAEAKMWNEVKRVKMLLEARGLQKVPGRSCIEIRRKIYSFMSVDEFNPQIE 549
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
Q++A L KL+ +M ++GYVPD VL+D++ EK +++ HSEKLA+AFGL+ G I
Sbjct: 550 QLHALLLKLSMEMKEKGYVPDTKVVLYDLDPEEKERIVLGHSEKLALAFGLINSKKGETI 609
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R+ KNLR+C DCH+ TK+ISK REILVRD RFHLF++G CSCGD+W
Sbjct: 610 RITKNLRLCEDCHSVTKFISKFANREILVRDVNRFHLFQDGVCSCGDYW 658
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 132/288 (45%), Gaps = 69/288 (23%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLML---KDGLGNLSRITFSTMLIMSSSRRC 57
MP + VSW+ +I+ ++ +G +A++++ M+ +D L N +T ++L ++
Sbjct: 244 MPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPN--SVTMVSVLQACAALAA 301
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
++ G+ +HG+IL+ G S + V S LV +YA+ G + R F+ + ++++V +N++I+
Sbjct: 302 LEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISS 361
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
G+ +G R+AI +F+EM +GL+ +F
Sbjct: 362 Y---GI----------------------------HGFGRKAIQIFKEMIDQGLSPSPISF 390
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
SVL AC +EEGK + ++R HK +
Sbjct: 391 VSVLGACSHAGLVEEGKVLFESMVRG-HK-----------------------------IF 420
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
+V + M+ G+ +EA KI +M+ IEP GS++ SC
Sbjct: 421 PSVEHYACMVDLLGRANRLDEAAKIIDDMR---IEPGPKVWGSLLGSC 465
>gi|356503769|ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Glycine max]
Length = 874
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/654 (36%), Positives = 372/654 (56%), Gaps = 12/654 (1%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D SWN +IS + A +++ M + T S +L S+S +
Sbjct: 226 IPRRDIASWNTIISAALQDSLYDTAFRLFRNMQATDAFRVDDFTLSILLTASAS---LME 282
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H H +K G + + VG+ L+ Y+K G + D + F+ + ++++ + M+T +
Sbjct: 283 GQQVHAHAVKLGLETDLNVGNGLIGFYSKFGNVDDVEWLFEGMRVRDVITWTEMVTAYME 342
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GLV + ++F M +K+S+S+ T++ G +N EA+ LF M EGL + F+ SV
Sbjct: 343 FGLVNLALKVFDEMPEKNSVSYNTVLAGFCRNEQGFEAMRLFVRMVEEGLELTDFSLTSV 402
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK-- 238
+ ACG L + KQ+H F ++ N +V +AL+DMY +C + A +F + W+
Sbjct: 403 VDACGLLGDYKVSKQVHGFAVKFGFGSNGYVEAALLDMYTRCGRMVDAGKMF--LRWELE 460
Query: 239 --NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGT 295
+ V WTAM+ GY +NG EEA+ +F + +G + D+ S++ C + L+ G
Sbjct: 461 EFSSVVWTAMICGYARNGQPEEAIYLFHVGRSDGKVIMDEVAAASMLGLCGTIGHLDMGK 520
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
Q H + GL + V NA+V+ Y KCG+++D+ ++F +M D V+W L+SG
Sbjct: 521 QIHCHVIKCGLGFNLEVGNAVVSMYFKCGSVDDAMKVFGDMPCTDIVTWNTLISGNLMHR 580
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGL--VEKGRHYFEIMVKEYGIRPIHD 413
+ + ++++ +ML G+KP++VT + ++SA + L V+ R+ F M Y I P
Sbjct: 581 QGDRALEIWVEMLGEGIKPNQVTFVLIISAYRQTNLNLVDDCRNLFNSMRTVYQIEPTSR 640
Query: 414 HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL 473
HY I +L G L+EA IN MPF P A+ W LL CR+H N IGKWAA+++L L
Sbjct: 641 HYASFISVLGHWGLLQEALETINNMPFQPSALVWRVLLDGCRLHKNELIGKWAAQNILAL 700
Query: 474 DPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWS 533
+P +P++++L+S++Y++ G+WD +R MREKG RK P SWI + +++ F D S
Sbjct: 701 EPKDPSTFILVSNLYSASGRWDRSEMVREDMREKGFRKHPAQSWIVCEKKINSFYPRDRS 760
Query: 534 SPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIP 593
P I LE L + +K GY PD S VLH+VE K L HHS KLA +G+L
Sbjct: 761 HPQEKDIQRGLEILILECLKIGYEPDTSFVLHEVEEHHKKIFLFHHSAKLAATYGILMTK 820
Query: 594 PGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
PG PIR+VKN+ +C DCH KY S +T+R+I +RD+ FH F NG+CSC D W
Sbjct: 821 PGKPIRIVKNILLCGDCHAFLKYASIVTKRDIFLRDSSGFHCFSNGQCSCKDCW 874
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 140/525 (26%), Positives = 233/525 (44%), Gaps = 74/525 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSR-RCVD 59
+P + VS+ LIS + H + A+ ++ M + T+ +L SS
Sbjct: 124 LPSPNVVSYTTLISFLSKHRQ-HHALHLFLRMTTRSHLPPNEYTYVAVLTACSSLLHHFH 182
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G Q+H LK FV + LV +YAK + A + F+++P ++I +NT+I+ L
Sbjct: 183 FGLQLHAAALKTAHFDSPFVANALVSLYAKHASFHAALKLFNQIPRRDIASWNTIISAAL 242
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ L + + RLFR M +A D FR +D FT
Sbjct: 243 QDSLYDTAFRLFRNM----------------------QATDAFR--------VDDFTLSI 272
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+LTA L+ EG+Q+HA ++ + ++ VG+ L+ Y K ++ E +F M ++
Sbjct: 273 LLTASASLM---EGQQVHAHAVKLGLETDLNVGNGLIGFYSKFGNVDDVEWLFEGMRVRD 329
Query: 240 VVSWTAM-------------------------------LVGYGQNGCSEEAVKIFCNMQR 268
V++WT M L G+ +N EA+++F M
Sbjct: 330 VITWTEMVTAYMEFGLVNLALKVFDEMPEKNSVSYNTVLAGFCRNEQGFEAMRLFVRMVE 389
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIED 328
G+E DF+L SV+ +C L + Q HG ++ G S V AL+ Y +CG + D
Sbjct: 390 EGLELTDFSLTSVVDACGLLGDYKVSKQVHGFAVKFGFGSNGYVEAALLDMYTRCGRMVD 449
Query: 329 SHRLFN--EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG-LKPDEVTLIGVLSA 385
+ ++F E+ V WTA++ GYA+ G+ E I LF S G + DEV +L
Sbjct: 450 AGKMFLRWELEEFSSVVWTAMICGYARNGQPEEAIYLFHVGRSDGKVIMDEVAAASMLGL 509
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
C G ++ G+ V + G+ + ++ + + G +++A MP D +
Sbjct: 510 CGTIGHLDMGKQ-IHCHVIKCGLGFNLEVGNAVVSMYFKCGSVDDAMKVFGDMP-CTDIV 567
Query: 446 GWATLLSSCRIH--GNVEIGKWAAESLLELDPYNPASYVLLSSIY 488
W TL+S +H G+ + W E L E N ++VL+ S Y
Sbjct: 568 TWNTLISGNLMHRQGDRALEIW-VEMLGEGIKPNQVTFVLIISAY 611
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 179/363 (49%), Gaps = 43/363 (11%)
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
E++ + N +I+ L+ L + RLF + + +S+TT+I+ L ++ + A+ LF
Sbjct: 95 EEDTHLSNALISTYLKLNLFPHALRLFLSLPSPNVVSYTTLISFLSKHR-QHHALHLFLR 153
Query: 165 MRLEG-LAMDQFTFGSVLTACGGLL-ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC 222
M L +++T+ +VLTAC LL G Q+HA ++ H D+ FV +ALV +Y K
Sbjct: 154 MTTRSHLPPNEYTYVAVLTACSSLLHHFHFGLQLHAAALKTAHFDSPFVANALVSLYAKH 213
Query: 223 KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQ-RNGIEPDDFTLGSV 281
S A +F + +++ SW ++ Q+ + A ++F NMQ + DDFTL +
Sbjct: 214 ASFHAALKLFNQIPRRDIASWNTIISAALQDSLYDTAFRLFRNMQATDAFRVDDFTLSIL 273
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE 341
+++ ASL EG Q H ++ GL + + V N L+ FY K GN++D LF M VRD
Sbjct: 274 LTAS---ASLMEGQQVHAHAVKLGLETDLNVGNGLIGFYSKFGNVDDVEWLFEGMRVRDV 330
Query: 342 VSWTALVSGYAKFGKAN-------------------------------ETIDLFEKMLSH 370
++WT +V+ Y +FG N E + LF +M+
Sbjct: 331 ITWTEMVTAYMEFGLVNLALKVFDEMPEKNSVSYNTVLAGFCRNEQGFEAMRLFVRMVEE 390
Query: 371 GLKPDEVTLIGVLSACSRAG--LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
GL+ + +L V+ AC G V K H F + ++G ++D+ +R GR+
Sbjct: 391 GLELTDFSLTSVVDACGLLGDYKVSKQVHGFAV---KFGFGSNGYVEAALLDMYTRCGRM 447
Query: 429 EEA 431
+A
Sbjct: 448 VDA 450
>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15130
gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 243/657 (36%), Positives = 374/657 (56%), Gaps = 44/657 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW+ L+SGH +G + ++ +++ M + G+ + TFST L ++
Sbjct: 67 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGI-YPNEFTFSTNLKACGLLNALEK 125
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G QIHG LK GF V VG+ LVDMY+K G I
Sbjct: 126 GLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI--------------------------- 158
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM--DQFTFG 178
E+ ++FR + D+ ISW MI G + G +A+D F M+ + D+FT
Sbjct: 159 ----NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLT 214
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
S+L AC + GKQIH F++R+ + + +LVD+Y KC + A F +
Sbjct: 215 SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK 274
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
K ++SW+++++GY Q G EA+ +F +Q + D F L S+I A+ A L +G Q
Sbjct: 275 EKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQ 334
Query: 297 FHGRS--LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
+ L +GL + +V N++V Y KCG ++++ + F EM ++D +SWT +++GY K
Sbjct: 335 MQALAVKLPSGLET--SVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKH 392
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G +++ +F +ML H ++PDEV + VLSACS +G++++G F +++ +GI+P +H
Sbjct: 393 GLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEH 452
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
Y C++D+L RAGRL+EAK I+ MP P+ W TLLS CR+HG++E+GK + LL +D
Sbjct: 453 YACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRID 512
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS 534
NPA+YV++S++Y G W+ R KG++K+ G SW++ + VH F + + S
Sbjct: 513 AKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSH 572
Query: 535 PYSDQIYAELEKLNRKMIKE-GYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLL--- 590
P + I L++ R++ +E GYV + LHD++ K + L HSEKLAI L
Sbjct: 573 PLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGG 632
Query: 591 FIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G IRV KNLRVC DCH K +SKIT+ +VRDAVRFH F++G CSCGD+W
Sbjct: 633 LNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 127/442 (28%), Positives = 224/442 (50%), Gaps = 42/442 (9%)
Query: 41 SRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF 100
R ++L + + + D G Q+H ++LK G G + + L+DMY K A + F
Sbjct: 5 QRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVF 64
Query: 101 DELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAID 160
D +PE+N+V SW+ +++G + NG + ++
Sbjct: 65 DSMPERNVV-------------------------------SWSALMSGHVLNGDLKGSLS 93
Query: 161 LFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYC 220
LF EM +G+ ++FTF + L ACG L ALE+G QIH F ++ + V VG++LVDMY
Sbjct: 94 LFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYS 153
Query: 221 KCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE--PDDFTL 278
KC I AE VFR + ++++SW AM+ G+ G +A+ F MQ I+ PD+FTL
Sbjct: 154 KCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTL 213
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGL--ISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
S++ +C++ + G Q HG + +G S T++ +LV Y KCG + + + F+++
Sbjct: 214 TSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQI 273
Query: 337 NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR 396
+ +SW++L+ GYA+ G+ E + LF+++ + D L ++ + L+ +G+
Sbjct: 274 KEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGK 333
Query: 397 HYFEIMVK-EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCR 455
+ VK G+ ++D+ + G ++EA+ +M D I W +++
Sbjct: 334 QMQALAVKLPSGLET--SVLNSVVDMYLKCGLVDEAEKCFAEMQL-KDVISWTVVITGYG 390
Query: 456 IHGNVEIGKWAAESLLELDPYN 477
HG +GK + E+ +N
Sbjct: 391 KHG---LGKKSVRIFYEMLRHN 409
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/520 (41%), Positives = 327/520 (62%), Gaps = 1/520 (0%)
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL-EGLAMDQFTFGSVLTACGGL 187
++F ++ + +W TMI G ++ A++LF +M + D TF + A L
Sbjct: 90 QIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKL 149
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
+ + G+ IH+ ++RN FV ++LV MY S+ A VF M++++ V+W +++
Sbjct: 150 MDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVI 209
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
G+ NG EA+ ++ M G+EPD FT+ S++S+C L +L G + H + GL+
Sbjct: 210 NGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLV 269
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
SNAL+ Y KCGN D+ ++F+EM R VSWT+L+ G A G NE + LF ++
Sbjct: 270 QNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGEL 329
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
GLKP E+T +GVL ACS G++++G +YF M +EYGI P +H+ CM+D+L RAG+
Sbjct: 330 ERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGK 389
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSI 487
+ +A +I MP PP+A+ W TLL +C IHG++E+G+ A + L+ + +VLLS++
Sbjct: 390 VGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNL 449
Query: 488 YASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKL 547
YAS+ +W V +R+ M KGV+K PG S ++ K+RV+ F D S P S++ YA L K+
Sbjct: 450 YASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKI 509
Query: 548 NRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVC 607
+ + EGYVP +VL D+E EK L+HH+EK+AIAF L+ PPG PIR++KNLRVC
Sbjct: 510 TQLLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVC 569
Query: 608 SDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+DCH A K ISK+ +REI+VRD RFH FK+G CSC D+W
Sbjct: 570 ADCHLAIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 168/343 (48%), Gaps = 33/343 (9%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
+WN +I G A + + AV++++ M TF + + V LG IH
Sbjct: 102 TWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSV 161
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
+++ GF S FV + LV MY+ LG + A +
Sbjct: 162 VVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQ----------------------------- 192
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
+F M +D ++W ++I G NG+ EA+ L+REM EG+ D FT S+L+AC L
Sbjct: 193 --VFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVEL 250
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
AL G+++H ++++ N +AL+D+Y KC + + A+ VF M ++VVSWT+++
Sbjct: 251 GALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLI 310
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR-SLVTGL 306
VG NG EA+K+F ++R G++P + T V+ +C++ L+EG + R G+
Sbjct: 311 VGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGI 370
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALV 348
+ I +V + G + D++ M V + V W L+
Sbjct: 371 LPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLL 413
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 113/255 (44%), Gaps = 46/255 (18%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + D V+WN +I+G A +G N+A+ +Y M +G+ T ++L + L
Sbjct: 197 MSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGV-EPDGFTMVSLLSACVELGALAL 255
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G ++H +++K G + L+D+Y+K G DA++ FDE+ E+++V + ++I G
Sbjct: 256 GERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVG--- 312
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
L NGL EA+ LF E+ +GL + TF V
Sbjct: 313 ----------------------------LAVNGLGNEALKLFGELERQGLKPSEITFVGV 344
Query: 181 LTACGGLLALEEG-------KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
L AC L+EG K+ + + R +H +VD+ C+ + A R
Sbjct: 345 LYACSHCGMLDEGFNYFRRMKEEYGILPRIEHH------GCMVDLLCRAGKVGDAYDYIR 398
Query: 234 TMAW-KNVVSWTAML 247
M N V W +L
Sbjct: 399 NMPVPPNAVIWRTLL 413
>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
Length = 734
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/641 (36%), Positives = 366/641 (57%), Gaps = 60/641 (9%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW ++IS +A +G + A+++++ M G+ S + + ++L ++LG+Q+H
Sbjct: 154 VSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAV-YMSLLQSCLGPSFLELGKQMHS 212
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
H+++ + + V + + +MY +R G +E
Sbjct: 213 HVIRAQLNANITVETAICNMY-------------------------------VRCGWLEG 241
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
++ +F GM +++++WT ++ G Q A++LF M +EG+ +D+F F VL C
Sbjct: 242 AKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCX 301
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L + GKQIH+ I++ + V VG+ LVD Y KC I+ A F ++ N VSW+A+
Sbjct: 302 LEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSAL 361
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ G+ Q+G E+ +KIF +++ G+ + F SV +CA A+L G+Q HG ++ GL
Sbjct: 362 ISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGL 421
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+S++ +A+VT Y KCG ++ + R F ++ D V+WTA++SGYA G A E + F +
Sbjct: 422 VSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRR 481
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M S+G++P+ VT I VL+ACS +GLV + + Y M ++YG++P DHY CMID SRAG
Sbjct: 482 MQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAG 541
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
L EA IN+MPF PDA+ W +LL C H ++++GK AAE+L LDP + A Y+LL +
Sbjct: 542 LLXEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFN 601
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
+Y++ GKW+ +R+ M E+ ++K+ CSWI K +VH +
Sbjct: 602 LYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVH----------------RPVRL 645
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
LN + D+S L + + L HSEKLAIAFGL+ PI V KNLR
Sbjct: 646 LNEE-------DDVS-----CSLPARKEQLLDHSEKLAIAFGLISTEDNAPILVFKNLRA 693
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCH K +S +T R+I+VRD+ RFH FK+G+CSC D+W
Sbjct: 694 CRDCHEFGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCNDYW 734
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 199/410 (48%), Gaps = 39/410 (9%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR IH + + + + L+ MY G D ++ FDE+ KN+V
Sbjct: 106 GRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLV----------- 154
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SW +I+ +NG +AI LF +M+ G+ + + S+
Sbjct: 155 --------------------SWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSL 194
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L +C G LE GKQ+H+ +IR N+ V +A+ +MY +C ++ A+ VF M +N
Sbjct: 195 LQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNA 254
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+WT ++VGY Q E A+++F M G+E D+F V+ C L + G Q H
Sbjct: 255 VTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSH 314
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ G S ++V LV FY KCG+IE ++R F ++ ++VSW+AL+SG+++ G+ +
Sbjct: 315 IVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDC 374
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
I +F + S G+ + V AC+ + G +K + ++ + M+
Sbjct: 375 IKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGE-SAMVT 433
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL 470
+ S+ GRL+ A+ + PDA+ W ++S HGN AAE+L
Sbjct: 434 MYSKCGRLDYARRAFESID-EPDAVAWTAIISGYAYHGN------AAEAL 476
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 167/352 (47%), Gaps = 34/352 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + V+W L+ G+ + A++++ M +G+ L FS +L + D+
Sbjct: 249 MDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGV-ELDEFVFSIVLKVCCXLEDWDM 307
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIH HI+K G S V VG+PLVD Y K G I A R F + E N V ++ +I+G +
Sbjct: 308 GKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQ 367
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G +E + I +F +R EG+ ++ F + SV
Sbjct: 368 SGRLE-------------------------------DCIKIFTSLRSEGVVLNSFIYTSV 396
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
AC L G Q H I+ ++ SA+V MY KC + YA F ++ +
Sbjct: 397 FQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDA 456
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+WTA++ GY +G + EA+ F MQ G+ P+ T +V+++C++ + E Q+ G
Sbjct: 457 VAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGS 516
Query: 301 -SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
S G+ I + ++ Y + G + ++ L N M D +SW +L+ G
Sbjct: 517 MSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLLGG 568
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 157/316 (49%), Gaps = 2/316 (0%)
Query: 146 ITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH 205
+ L + G +EA D +EM +++ ++ + ACG L +L +G+ IH + R
Sbjct: 59 LVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVK 118
Query: 206 KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCN 265
+ + + L+ MYC C S + VF M KN+VSW ++ Y +NG E+A+++F +
Sbjct: 119 NPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSD 178
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
MQ +GI P+ S++ SC + LE G Q H + L + ITV A+ Y +CG
Sbjct: 179 MQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGW 238
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+E + +F+ M+ ++ V+WT L+ GY + K ++LF +M G++ DE VL
Sbjct: 239 LEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKV 298
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
C + G+ +VK G T ++D + G +E A ++ P D +
Sbjct: 299 CCXLEDWDMGKQIHSHIVK-LGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPND-V 356
Query: 446 GWATLLSSCRIHGNVE 461
W+ L+S G +E
Sbjct: 357 SWSALISGFSQSGRLE 372
>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 242/633 (38%), Positives = 356/633 (56%), Gaps = 67/633 (10%)
Query: 50 IMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIV 109
+ S R+ + +++H I+K G + L+D Y K GL+ DA
Sbjct: 16 LFSLGRKNPFIAKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDA------------- 62
Query: 110 MYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG 169
+LF + +D ++W T+++ + L +A + + EG
Sbjct: 63 ------------------LKLFDALPQQDHVAWATVLSACNLSNLPHKAFSISLPILHEG 104
Query: 170 LAMDQFTFGSVLTACGGL--LALEEGKQIHA-FIIRNDHKDNVFVGSALVDMYCKCKSIK 226
L D F F S++ AC L + ++ GKQ+HA F++ +D+V V S+LVDMY K +
Sbjct: 105 LQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFEDDV-VKSSLVDMYAKFELPD 163
Query: 227 YAESVF-------------------------------RTMAWKNVVSWTAMLVGYGQNGC 255
Y +VF R +KN+ +WTA++ G Q+G
Sbjct: 164 YGRAVFDSIFELSSISWTAMISGYARSGRKLEALELFRESPFKNLYAWTALISGLVQSGN 223
Query: 256 SEEAVKIFCNMQRNGIE-PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSN 314
+ +A+ +F M+R G+ D L SV+ +CAN A E G Q H + G S + +SN
Sbjct: 224 ANDALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQVHCVVITLGYESCLFISN 283
Query: 315 ALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKP 374
ALV Y KC ++ + +F EM +D VSWT+++ G A+ G A E + L++ M+ G+KP
Sbjct: 284 ALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKP 343
Query: 375 DEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSF 434
+EVT +G++ ACS GLV KGR F+ MV+++GIRP HYTC++D+ SR+G L+EA++
Sbjct: 344 NEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENL 403
Query: 435 INKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKW 494
I MP PD WA LLS+C+ HGN ++ A+ LL+L P +P+SY+LLS+IYA G W
Sbjct: 404 IRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLLDLKPEDPSSYILLSNIYAGAGMW 463
Query: 495 DHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKE 554
++VS +R+ M K V+K PG S + +F A + S P D+I + KL+ +M +
Sbjct: 464 ENVSMVRKLMAVKEVKKVPGYSCVDLGREFQVFHAGEASQPMKDEILGLMTKLDSEMRRR 523
Query: 555 GYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNAT 614
GYVPD SSVL D++ EK + L HSE+LA+A+GLL PG IR+VKNLRVC DCH
Sbjct: 524 GYVPDTSSVLLDMDQQEKERQLFWHSERLALAYGLLKAVPGTTIRIVKNLRVCGDCHTVL 583
Query: 615 KYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
K IS IT REI VRD R+H FK+G+CSC DFW
Sbjct: 584 KLISAITSREIYVRDVKRYHHFKDGKCSCNDFW 616
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/390 (30%), Positives = 208/390 (53%), Gaps = 10/390 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCV-- 58
+P D V+W ++S + A + +L +GL FS+++ ++ V
Sbjct: 69 LPQQDHVAWATVLSACNLSNLPHKAFSISLPILHEGL-QPDHFVFSSLIKACANLGSVHV 127
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
LG+Q+H L F V S LVDMYAK L + FD + E + + + MI+G
Sbjct: 128 KLGKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGY 187
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM-DQFTF 177
R G E+ LFR K+ +WT +I+GL+Q+G +A+ LF EMR EG+++ D
Sbjct: 188 ARSGRKLEALELFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVL 247
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
SV+ AC E GKQ+H +I ++ +F+ +ALVDMY KC + A+ +F M
Sbjct: 248 SSVVGACANSAVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRR 307
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
K+VVSWT+++VG Q+G +EEA+ ++ +M G++P++ T +I +C+++ + +G
Sbjct: 308 KDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRAL 367
Query: 298 HGRSLVT--GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKF 354
+S+V G+ + L+ + + G+++++ L M V+ DE +W AL+S
Sbjct: 368 F-KSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHH 426
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
G + + + +L LKP++ + +LS
Sbjct: 427 GNTKMAVRIADHLLD--LKPEDPSSYILLS 454
>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
Length = 721
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 247/652 (37%), Positives = 368/652 (56%), Gaps = 51/652 (7%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
SWN++IS +A G + A+ ++ M + +TF+T L SS + GR+IH
Sbjct: 109 SWNIIISAYAHRGHPSTALHLFAKMDVPP----TAMTFATALSACSSLGDLQRGREIHAR 164
Query: 68 I-LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
I G V + + + MYAK G + AK FD +P KN+V
Sbjct: 165 IKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAKNVV----------------- 207
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNG-LEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
SW +I Q+G +A+DLF +M G+ + TF VL AC
Sbjct: 208 --------------SWNALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVLGACN 253
Query: 186 GLLALEEGKQIHAFIIRN----DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+ +LE +IHA I+ D +D V V +AL++MY KC S++ A +FR M ++ V
Sbjct: 254 DVTSLE---KIHARIVETGLQFDVRD-VGVQNALLNMYAKCGSLEVARDIFRKMQRRDQV 309
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
S M+ + Q G +E++++F M G+ DD T SVI++C+ +LE G + H R
Sbjct: 310 SMNVMIATFAQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIHKRV 369
Query: 302 LVTGL-----ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
+ L + + V ALV+ YGKCG +E + +F M ++ VSW A+++ A G+
Sbjct: 370 VEPVLGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACAHQGQ 429
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
+E G++ D + I VL ACS +G++E +F++M+ ++ + P ++Y
Sbjct: 430 GDEAAAFLRAAACEGVELDSASFISVLIACSHSGMLEVAYDHFQLMLSDFDLVPAAENYR 489
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY 476
CM+D+L+R+GRL +A +N MPF PDAI W TLL CR+ G++E AAE L+P
Sbjct: 490 CMVDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAAEQAFNLEPQ 549
Query: 477 NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRK-DPGCSWIKYKSRVHIFSADDWSSP 535
N A Y LLSS+Y++ GK D + +LR +M+E+G+RK PG S I+ RVH F A D S P
Sbjct: 550 NTAPYTLLSSLYSATGKKDELVELRSSMKERGLRKLVPGRSVIEVHGRVHEFVAGDSSHP 609
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
D+I EL+ LN ++ + G+VP V+HD++ +K ++L HSEKLA+AFGL+ G
Sbjct: 610 QIDKILRELDILNVELKQAGFVPSTDGVVHDLKTEDKEEILALHSEKLAVAFGLISTKSG 669
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+P+ V+KNLRVCSDCH A K ISK+ R I VRDA RFH F++G CSCGD+W
Sbjct: 670 IPLLVLKNLRVCSDCHGAIKLISKLRSRVITVRDANRFHRFQSGTCSCGDYW 721
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 123/405 (30%), Positives = 201/405 (49%), Gaps = 47/405 (11%)
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
IH I + G GS ++ + LV M AK G + +A+ FD + KNI +N +I+ R
Sbjct: 63 IHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAIQHKNIFSWNIIISAYAHR-- 120
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
G A+ LF +M + AM TF + L+A
Sbjct: 121 -----------------------------GHPSTALHLFAKMDVPPTAM---TFATALSA 148
Query: 184 CGGLLALEEGKQIHAFI-IRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
C L L+ G++IHA I + +V + +A+ MY KC + A+SVF + KNVVS
Sbjct: 149 CSSLGDLQRGREIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAKNVVS 208
Query: 243 WTAMLVGYGQNGCS-EEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
W A++ Y Q+G S +A+ +F M +G+ P T V+ +C ++ SLE + H R
Sbjct: 209 WNALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVLGACNDVTSLE---KIHARI 265
Query: 302 LVTGL---ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
+ TGL + + V NAL+ Y KCG++E + +F +M RD+VS +++ +A+ G
Sbjct: 266 VETGLQFDVRDVGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATFAQQGLGK 325
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR----PIHDH 414
E+I +F +M GL D+ T V++ACS G +E G+ + +V+ R P
Sbjct: 326 ESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCCLPNVVV 385
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
T ++ + + G LE+AK+ M +++ W +L++C G
Sbjct: 386 ETALVSMYGKCGTLEQAKAVFKAMT-TKNSVSWNAMLAACAHQGQ 429
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 243/650 (37%), Positives = 381/650 (58%), Gaps = 22/650 (3%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSWN LISGH +G +++A +V+ D + + + +++++M+ V
Sbjct: 81 MPQRNTVSWNGLISGHIKNGMLSEARRVF-----DTMPDRNVVSWTSMVRGYVRNGDVAE 135
Query: 61 GRQIHGHILKFGFGSY-VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
++ H+ S+ V +G L + G + DA++ FD +PEK++V MI G
Sbjct: 136 AERLFWHMPHKNVVSWTVMLGGLLQE-----GRVDDARKLFDMMPEKDVVAVTNMIGGYC 190
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
G ++E+R LF M ++ ++WT M++G +NG A LF M ++ ++ +
Sbjct: 191 EEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMP----ERNEVSWTA 246
Query: 180 VLTACGGLLALEEGKQI-HAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
+L + E + A ++ V V + ++ + + A VF+ M +
Sbjct: 247 MLLGYTHSGRMREASSLFDAMPVKP-----VVVCNEMIMGFGLNGEVDKARRVFKGMKER 301
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+ +W+AM+ Y + G EA+ +F MQR G+ + +L SV+S C +LASL+ G Q H
Sbjct: 302 DNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVH 361
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
+ + + + V++ L+T Y KCGN+ + ++FN ++D V W ++++GY++ G
Sbjct: 362 AQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGE 421
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
E +++F M S G+ PD+VT IGVLSACS +G V++G FE M +Y + P +HY C+
Sbjct: 422 EALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACL 481
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
+D+L RA ++ EA + KMP PDAI W LL +CR H +++ + A E L +L+P N
Sbjct: 482 VDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNA 541
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFS-ADDWSSPYS 537
YVLLS++YA KG+W V LR ++ + V K PGCSWI+ + +VH+F+ D P
Sbjct: 542 GPYVLLSNMYAYKGRWRDVEVLREKIKARSVTKLPGCSWIEVEKKVHMFTGGDSKGHPEQ 601
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
I LEKL + + GY PD S VLHDV+ EK L +HSEKLA+A+GLL +P G+P
Sbjct: 602 PIIMKMLEKLGGLLREAGYCPDGSFVLHDVDEEEKTHSLGYHSEKLAVAYGLLKVPEGMP 661
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
IRV+KNLRVC DCH+A K I+K+T REI++RDA RFH FK+G CSC D+W
Sbjct: 662 IRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGHCSCKDYW 711
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 184/366 (50%), Gaps = 32/366 (8%)
Query: 100 FDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAI 159
F+++P++N V +N +I+G ++ G++ E+RR+F M D++ +SWT+M+ G ++NG EA
Sbjct: 78 FEKMPQRNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAE 137
Query: 160 DLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRN--DHKDNVFVGSALVD 217
LF M + + S GGL L+EG+ A + + KD V V + ++
Sbjct: 138 RLFWHMPHKNVV-------SWTVMLGGL--LQEGRVDDARKLFDMMPEKDVVAV-TNMIG 187
Query: 218 MYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDF 276
YC+ + A ++F M +NVV+WTAM+ GY +NG + A K+F M +RN +
Sbjct: 188 GYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAM 247
Query: 277 TLGSVISSCANLASLEEGTQFHGRSLVTGL-ISFITVSNALVTFYGKCGNIEDSHRLFNE 335
LG S G SL + + + V N ++ +G G ++ + R+F
Sbjct: 248 LLGYTHS----------GRMREASSLFDAMPVKPVVVCNEMIMGFGLNGEVDKARRVFKG 297
Query: 336 MNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG 395
M RD +W+A++ Y + G E + LF +M GL + +LI VLS C ++ G
Sbjct: 298 MKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHG 357
Query: 396 RHYFEIMVK-EYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ +V+ E+ D Y + +I + + G L AK N+ P D + W ++++
Sbjct: 358 KQVHAQLVRSEFD----QDLYVASVLITMYVKCGNLVRAKQVFNRFPL-KDVVMWNSMIT 412
Query: 453 SCRIHG 458
HG
Sbjct: 413 GYSQHG 418
>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
Length = 640
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/607 (38%), Positives = 345/607 (56%), Gaps = 34/607 (5%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
++T+L R V GRQ+H +L G G + + LVD+YA GL
Sbjct: 65 NYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGL----------- 113
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSI-SWTTMITGLMQNGLEREAIDLF 162
V +RRLF M ++ ++ W +I ++G AI+L+
Sbjct: 114 --------------------VSVARRLFDEMPNQGNVFLWNVLIRAYARDGPREAAIELY 153
Query: 163 REMRLEG-LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK 221
REM G + D FT+ VL AC LL L G+++H ++R +VFV + L+DMY K
Sbjct: 154 REMLACGSMEPDNFTYPPVLKACAALLDLGAGREVHDRVMRTSWAADVFVCAGLIDMYAK 213
Query: 222 CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
C + A +VF + ++ V W +M+ GQNG EA+ + NM GI P TL S
Sbjct: 214 CGCVDEAWAVFDSTTVRDAVVWNSMIAACGQNGRPAEALALCRNMAAEGIAPTIVTLVSA 273
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE 341
IS+ A+ +L G + HG G S + +L+ Y K G + + LF+++ R+
Sbjct: 274 ISAAADAGALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHREL 333
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
+SW A++ G+ G A+ +LF +M + + PD +T +GVLSAC+ G+V++ + F+
Sbjct: 334 ISWNAMICGFGMHGHADHACELFRRMRNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFD 393
Query: 401 IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
+MV Y I+P+ HYTC++D+L +GR +EA I M PD+ W LL+ C+IH NV
Sbjct: 394 LMVTVYSIKPMVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNV 453
Query: 461 EIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKY 520
E+ + A L+EL+P + +YVLLS+IYA GKW+ +++R+ M +G++K CSWI+
Sbjct: 454 ELAELALHKLIELEPEDAGNYVLLSNIYAQSGKWEEAARVRKLMTNRGLKKIIACSWIEL 513
Query: 521 KSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHS 580
K + H F D S P SD+IY ELE+L + + GYVPD +SV H+VE EK M+ HS
Sbjct: 514 KGKSHGFLVGDASHPRSDEIYEELERLEGLISQTGYVPDTTSVFHNVEDDEKRNMVRGHS 573
Query: 581 EKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGE 640
E+LAIAFGL+ PPG + V KNLRVC DCH K IS+I QREI++RD R+H F NGE
Sbjct: 574 ERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLISQIEQREIIIRDVNRYHHFVNGE 633
Query: 641 CSCGDFW 647
CSC D W
Sbjct: 634 CSCKDHW 640
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 165/363 (45%), Gaps = 38/363 (10%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN+LI +A G A+++Y ML G T+ +L ++ + GR++H +
Sbjct: 133 WNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAGREVHDRV 192
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
++ + + VFV + L+DMYAK G + +A FD ++ V++N+
Sbjct: 193 MRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNS--------------- 237
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
MI QNG EA+ L R M EG+A T S ++A
Sbjct: 238 ----------------MIAACGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAG 281
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
AL G+++H + R + ++L+DMY K + A +F + + ++SW AM+
Sbjct: 282 ALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMIC 341
Query: 249 GYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQ-FHGRSLVTGL 306
G+G +G ++ A ++F M+ + PD T V+S+C + ++E + F V +
Sbjct: 342 GFGMHGHADHACELFRRMRNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSI 401
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKANETIDLFE 365
+ LV G G +++ + M V+ D W AL++G K ++ ++L E
Sbjct: 402 KPMVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGC----KIHKNVELAE 457
Query: 366 KML 368
L
Sbjct: 458 LAL 460
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 88/166 (53%), Gaps = 6/166 (3%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V WN +I+ +G +A+ + M +G+ + +T + + ++ + GR++
Sbjct: 231 DAVVWNSMIAACGQNGRPAEALALCRNMAAEGIAP-TIVTLVSAISAAADAGALPRGREL 289
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG+ + GFGS + + L+DMYAK G + A+ FD+L + ++ +N MI G G
Sbjct: 290 HGYGWRRGFGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHA 349
Query: 125 EESRRLFRGMKDK-----DSISWTTMITGLMQNGLEREAIDLFREM 165
+ + LFR M+++ D I++ +++ G+ +EA ++F M
Sbjct: 350 DHACELFRRMRNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLM 395
>gi|297800868|ref|XP_002868318.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
lyrata]
gi|297314154|gb|EFH44577.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/548 (41%), Positives = 339/548 (61%), Gaps = 35/548 (6%)
Query: 134 MKDKDSISWTTMITGLMQNGLEREAI-DLFREMRLEGLAMDQFTFGSVLTACGGLLALEE 192
M +D I+W +++T L Q L + + GL D F F +++ AC L +++
Sbjct: 1 MPHRDHIAWASVLTALNQANLSGKTLWVFSSVGSSSGLRPDDFVFSALVKACANLGSIKL 60
Query: 193 GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
GKQ+H I +++ ++ V S+LVDMY KC+ + A++VF ++ KN +SWTAM+ GY +
Sbjct: 61 GKQVHCHFIVSEYSNDDVVKSSLVDMYAKCRLLDCAKAVFDSIRVKNTISWTAMVSGYAK 120
Query: 253 NGCSEEAVK-------------------------------IFCNMQRNGIEP-DDFTLGS 280
+G EEA++ +F M+R ++ D L S
Sbjct: 121 SGRKEEALELFRRLPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSS 180
Query: 281 VISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD 340
++ +CANLA+ G Q HG + G S + +SNAL+ Y KC ++ + +F+ M RD
Sbjct: 181 IVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRD 240
Query: 341 EVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
VSWT+L+ G A+ G+A + + L+++M+SHG+KP+EVT +G++ ACS G V KGR F+
Sbjct: 241 VVSWTSLIVGMAQHGQAEKALALYDEMVSHGVKPNEVTFVGLIYACSHVGFVAKGRELFQ 300
Query: 401 IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
M K+YGIRP HYTC++D+L R+G L+EA++ I+ MPFPPD WA LLS+C+ G
Sbjct: 301 SMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGQG 360
Query: 461 EIGKWAAESLL-ELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIK 519
++G A+ L+ P +P++Y+LLS+IYAS W VS+ RR + + VRKDPG S ++
Sbjct: 361 QMGVRIADHLVSSFKPKDPSTYILLSNIYASASLWGKVSEARRKLGDMEVRKDPGYSSVE 420
Query: 520 YKSRVHIFSADDWSSPYSDQIYAELEKLNRKM-IKEGYVPDMSSVLHDVELSEKIKMLNH 578
+ +F A + S + I+ L+KL +M I+ GYVPD S +LHD++ EK K+L
Sbjct: 421 VRKETEVFYAGETSHALKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFW 480
Query: 579 HSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKN 638
HSE+ A+A+GLL PG PIR+VKNLRVC DCH K+IS+IT+REI+VRDA R+H FK
Sbjct: 481 HSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKG 540
Query: 639 GECSCGDF 646
G+CSC DF
Sbjct: 541 GKCSCNDF 548
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 195/359 (54%), Gaps = 8/359 (2%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
FS ++ ++ + LG+Q+H H + + + V S LVDMYAK L+ AK FD +
Sbjct: 45 FSALVKACANLGSIKLGKQVHCHFIVSEYSNDDVVKSSLVDMYAKCRLLDCAKAVFDSIR 104
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
KN + + M++G + G EE+ LFR + K+ SWT +I+G +Q+G EA +F E
Sbjct: 105 VKNTISWTAMVSGYAKSGRKEEALELFRRLPVKNLYSWTALISGFVQSGKGLEAFSVFTE 164
Query: 165 MRLEGL-AMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
MR E + +D S++ AC L A G+Q+H +I VF+ +AL+DMY KC
Sbjct: 165 MRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCS 224
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
+ A+ +F M ++VVSWT+++VG Q+G +E+A+ ++ M +G++P++ T +I
Sbjct: 225 DVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDEMVSHGVKPNEVTFVGLIY 284
Query: 284 SCANLASLEEGTQ-FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDE 341
+C+++ + +G + F + G+ + L+ G+ G ++++ L + M DE
Sbjct: 285 ACSHVGFVAKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDE 344
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDE----VTLIGVLSACSRAGLVEKGR 396
+W AL+S + G+ + + + ++S KP + + L + ++ S G V + R
Sbjct: 345 PTWAALLSACKRQGQGQMGVRIADHLVS-SFKPKDPSTYILLSNIYASASLWGKVSEAR 402
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 244/646 (37%), Positives = 361/646 (55%), Gaps = 41/646 (6%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG----- 61
VSWN +IS + G VN+A + M G + + + I++ C+D
Sbjct: 315 VSWNTMISAFSLEGDVNEAFNLLQEMQIQG----EEMKANEVTILNVLPACLDKLQLRSL 370
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+++HG+ + F +V + + + YAK G + A++
Sbjct: 371 KELHGYSFRHCF-QHVELSNAFILAYAKCGALNSAEK----------------------- 406
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
+F G+ DK SW +I G QNG R+A+ L +M G D FT S+L
Sbjct: 407 --------VFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLL 458
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
AC L +L+ GK+IH +++RN + + FVG++L+ Y C A +F M KN+V
Sbjct: 459 LACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLV 518
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW AM+ GY QNG E++ +F GI+ + + SV +C+ L++L G + HG
Sbjct: 519 SWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYV 578
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
L V +++ Y K G I++S ++F+ + ++ SW A++ + G E I
Sbjct: 579 LKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAI 638
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
+L+E+M G PD T IG+L AC AGLVE+G YF+ M I P +HY C+ID+
Sbjct: 639 ELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDM 698
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
L+RAGRL++A +N+MP D W++LL SCR G +EIG+ A+ LLEL+P +Y
Sbjct: 699 LARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAENY 758
Query: 482 VLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIY 541
VLLS++YA GKWD V ++R+ M+E G++KD GCSWI+ RV+ F D P S +I
Sbjct: 759 VLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQPKSAEIR 818
Query: 542 AELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVV 601
+L ++ + GY P+ SSVLH+V EKI +L HSEKLAI+FGLL G +R+
Sbjct: 819 VIWRRLEERISEIGYKPNTSSVLHEVGEEEKIDILRGHSEKLAISFGLLKTTKGTTLRIY 878
Query: 602 KNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLR+C+DCHNA K ISK +REI+VRD RFH F++G CSC D+W
Sbjct: 879 KNLRICADCHNAAKLISKAVEREIVVRDNKRFHHFRDGLCSCCDYW 924
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 137/471 (29%), Positives = 237/471 (50%), Gaps = 41/471 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSWN +I + +G D+ + ML + +T T+L + + VD+
Sbjct: 207 MPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDI 266
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G IHG +K G V V + +V MY+K G + +A+ F + KN+V +NTMI+
Sbjct: 267 GMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSL 326
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM--DQFTFG 178
G V EA +L +EM+++G M ++ T
Sbjct: 327 EGDV-------------------------------NEAFNLLQEMQIQGEEMKANEVTIL 355
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
+VL AC L L K++H + R+ + +V + +A + Y KC ++ AE VF + K
Sbjct: 356 NVLPACLDKLQLRSLKELHGYSFRHCFQ-HVELSNAFILAYAKCGALNSAEKVFHGIGDK 414
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
V SW A++ G+ QNG +A+ + M +G +PD FT+ S++ +CA+L SL+ G + H
Sbjct: 415 TVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIH 474
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G L GL + V +L++ Y CG + LF+ M ++ VSW A++SGY++ G
Sbjct: 475 GYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPY 534
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC- 417
E++ LF K LS G++ E+ ++ V ACS+ + G+ ++K ++ C
Sbjct: 535 ESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLK--ALQTEDAFVGCS 592
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
+ID+ +++G ++E++ + + + W ++ + IHG+ GK A E
Sbjct: 593 IIDMYAKSGCIKESRKVFDGLK-DKNVASWNAIIVAHGIHGH---GKEAIE 639
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 120/449 (26%), Positives = 203/449 (45%), Gaps = 37/449 (8%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
+ WN L+SG+ +G D VKV+ ++ D TF +++ V LG IHG
Sbjct: 111 IQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHG 170
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++K G VFVG+ LV MY K G V+E
Sbjct: 171 MVIKMGLVLDVFVGNALVGMYGKCGA-------------------------------VDE 199
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR-LEGLAMDQFTFGSVLTACG 185
+ ++F M + + +SW +MI +NG R++ DL EM EGL D T ++L C
Sbjct: 200 AMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCA 259
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
G ++ G IH ++ + V V +A+V MY KC + A+ F KNVVSW
Sbjct: 260 GEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNT 319
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIE--PDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
M+ + G EA + MQ G E ++ T+ +V+ +C + L + HG S
Sbjct: 320 MISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSF- 378
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
+ +SNA + Y KCG + + ++F+ + + SW AL+ G+A+ G + + L
Sbjct: 379 RHCFQHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHL 438
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
+M G +PD T+ +L AC+ ++ G+ +++ G+ T ++
Sbjct: 439 LFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRN-GLETDFFVGTSLLSHYI 497
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLS 452
G+ A+ ++M + + W ++S
Sbjct: 498 HCGKASSARVLFDRMK-DKNLVSWNAMIS 525
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 151/265 (56%), Gaps = 4/265 (1%)
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQFTFGSVLTAC 184
+SR +F M+ K+ I W +++G +NGL + + +F ++ + D FTF SV+ AC
Sbjct: 97 DSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKAC 156
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
GG+L + G+ IH +I+ +VFVG+ALV MY KC ++ A VF M N+VSW
Sbjct: 157 GGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWN 216
Query: 245 AMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
+M+ + +NG S ++ + M G+ PD T+ +++ CA ++ G HG ++
Sbjct: 217 SMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVK 276
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
GL + V+NA+V Y KCG + ++ F + N ++ VSW ++S ++ G NE +L
Sbjct: 277 LGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNL 336
Query: 364 FEKMLSHG--LKPDEVTLIGVLSAC 386
++M G +K +EVT++ VL AC
Sbjct: 337 LQEMQIQGEEMKANEVTILNVLPAC 361
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 157/289 (54%), Gaps = 7/289 (2%)
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFV-GSALVDMYCKCKSIKYAESVFRT 234
G +L ACG +E G+++H F+ + H N +V + L+ MY C S + VF
Sbjct: 45 AIGLLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDN 104
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN-GIEPDDFTLGSVISSCANLASLEE 293
M KN++ W A++ GY +NG + VK+F ++ + +PD+FT SVI +C + +
Sbjct: 105 METKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRL 164
Query: 294 GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK 353
G HG + GL+ + V NALV YGKCG ++++ ++F+ M + VSW +++ +++
Sbjct: 165 GEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSE 224
Query: 354 FGKANETIDLFEKML-SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
G + ++ DL +ML GL PD VT++ +L C+ G V+ G + VK G+
Sbjct: 225 NGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVK-LGLSEEV 283
Query: 413 DHYTCMIDILSRAGRLEEAK-SFINKMPFPPDAIGWATLLSSCRIHGNV 460
M+ + S+ G L EA+ SF+ + + W T++S+ + G+V
Sbjct: 284 MVNNAMVYMYSKCGYLNEAQMSFVKNN--NKNVVSWNTMISAFSLEGDV 330
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 242/651 (37%), Positives = 363/651 (55%), Gaps = 63/651 (9%)
Query: 28 VYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMY 87
VY M GL + R +F +L S + + G +IHG K GF S FV + LV MY
Sbjct: 109 VYERMRTQGLA-VDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMY 167
Query: 88 AKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMIT 147
A G I E+R +F M +D ++W+ MI
Sbjct: 168 AACGRI-------------------------------AEARLMFDKMFHRDVVTWSIMID 196
Query: 148 GLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKD 207
G Q+GL +A+ LF EM+ + D+ +VL+ACG L GK IH FI+ N+
Sbjct: 197 GYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVV 256
Query: 208 NVFVGSALVDMYCKCKS-------------------------------IKYAESVFRTMA 236
+ + SALV MY C S I+ A SVF M
Sbjct: 257 DPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMV 316
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
K++V W+AM+ GY ++ +EA+ +F MQ GI+PD T+ SVI++CA+L +L++
Sbjct: 317 KKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKW 376
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H G + ++NAL+ Y KCG++E + R+F++M ++ +SWT ++S +A G
Sbjct: 377 IHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGD 436
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
A + F +M ++P+ +T +GVL ACS AGLVE+GR F M+ E+ I P H HY
Sbjct: 437 AGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYG 496
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY 476
CM+D+ RA L EA + MP P+ I W +L+++CR+HG +E+G++AA+ LLELDP
Sbjct: 497 CMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPD 556
Query: 477 NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPY 536
+ ++V LS+IYA +W+ V Q+R+ M+ KG+ K+ GCS + + +H F D S +
Sbjct: 557 HDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKH 616
Query: 537 SDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGL 596
+D+IY +L ++ K+ GY P+ S+L D+E EK +++ HSEKLA+ +GL+ G
Sbjct: 617 ADEIYEKLYEVVSKLKLVGYSPNTCSILVDLEEEEKKEVVLWHSEKLALCYGLMRDGTGS 676
Query: 597 PIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
IR++KNLRVC DCH K SK+ +REI+VRD RFH +K+G CSC D+W
Sbjct: 677 CIRIIKNLRVCEDCHTFIKLASKVYEREIVVRDRTRFHHYKDGVCSCKDYW 727
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 214/431 (49%), Gaps = 41/431 (9%)
Query: 3 FH-DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
FH D V+W+++I G+ G NDA+ ++ M K+ + ST+L + G
Sbjct: 184 FHRDVVTWSIMIDGYCQSGLFNDALLLFEEM-KNYNVEPDEMMLSTVLSACGRAGNLSYG 242
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+ IH I++ + S LV MYA G + A F+++ KN+V M+TG +
Sbjct: 243 KMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKL 302
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G +E +R +F M KD + W+ MI+G ++ +EA++LF EM+ G+ DQ T SV+
Sbjct: 303 GQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVI 362
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
TAC L AL++ K IH F+ +N + + +AL++MY KC S++ A +F M KNV+
Sbjct: 363 TACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVI 422
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SWT M+ + +G + A++ F M+ IEP+ T V+ +C++ +EEG +
Sbjct: 423 SWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKI---- 478
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE-VSWTALVSGYAKFGKANET 360
FY + NE N+ + V + +V + + E
Sbjct: 479 -----------------FYS----------MINEHNITPKHVHYGCMVDLFGRANLLREA 511
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD-HYTCMI 419
++L E M L P+ + +++AC G +E G + +++ + P HD + +
Sbjct: 512 LELVEAM---PLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLE---LDPDHDGAHVFLS 565
Query: 420 DILSRAGRLEE 430
+I ++A R E+
Sbjct: 566 NIYAKARRWED 576
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 156/335 (46%), Gaps = 6/335 (1%)
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK-CKSIKYAESVFRTMAW 237
++ +A +L KQ+HA I+R+ + + LV C S+ YA SVF +
Sbjct: 25 TLFSALSSATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPK 84
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
L ++ E+ + ++ M+ G+ D F+ ++ + + + SL EG +
Sbjct: 85 PETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEI 144
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
HG + G S V LV Y CG I ++ +F++M RD V+W+ ++ GY + G
Sbjct: 145 HGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLF 204
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
N+ + LFE+M ++ ++PDE+ L VLSAC RAG + G+ + +++ + H +
Sbjct: 205 NDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQ-SA 263
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
++ + + G ++ A + KM P + + +++ G +E + +++ D
Sbjct: 264 LVTMYASCGSMDLALNLFEKMT-PKNLVASTAMVTGYSKLGQIENARSVFNQMVKKD--- 319
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKD 512
+ + S YA L M+ G++ D
Sbjct: 320 LVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPD 354
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 111/264 (42%), Gaps = 45/264 (17%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +SW +IS A HG A++ ++ M + + + ITF +L S V+
Sbjct: 416 MPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENI-EPNGITFVGVLYACSHAGLVEE 474
Query: 61 GRQIHGHILKFG--FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITG 117
GR+I ++ +V G +VD++ + L+ +A + +P N++++ +++
Sbjct: 475 GRKIFYSMINEHNITPKHVHYGC-MVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAA 533
Query: 118 LLRRGLVE----ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE-MRLEGLAM 172
G +E ++RL D D ++ + E + R+ M+ +G++
Sbjct: 534 CRVHGEIELGEFAAKRLLELDPDHDGAH--VFLSNIYAKARRWEDVGQVRKLMKHKGISK 591
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
++ G E +IH F++ + +S K+A+ ++
Sbjct: 592 ER-----------GCSRFELNNEIHEFLVAD-------------------RSHKHADEIY 621
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCS 256
+ VVS LVGY N CS
Sbjct: 622 EKL--YEVVS-KLKLVGYSPNTCS 642
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/644 (36%), Positives = 369/644 (57%), Gaps = 33/644 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V W ++S + +G D++++ + M DG + TF T L S + +
Sbjct: 211 DIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMP-NNYTFDTALKASIGLGAFHFAKSV 269
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG ILK + VG L+ +Y +LG + DA + F+E+P+ ++V
Sbjct: 270 HGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVV--------------- 314
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
W+ MI QNG +A+D+F MR + ++FT S+L C
Sbjct: 315 ----------------PWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGC 358
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G+Q+H +++ +V+V +AL+D+Y KC+ + A +F ++ KNVVSW
Sbjct: 359 AIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWN 418
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++VGY G +A+ +F RN + + T S + +CA+LAS+E G Q HG ++ T
Sbjct: 419 TVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKT 478
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
+ VSN+L+ Y KCG+I+ + +FNEM D SW AL+SGY+ G + + +F
Sbjct: 479 NNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIF 538
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+ M KP+ +T +GVLS CS AGL+++G+ FE M+ ++GI P +HYTCM+ + R
Sbjct: 539 DIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGR 598
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
+G+L++A + I +P+ P + W +LS+ N E + +AE +L+++P + A+YVLL
Sbjct: 599 SGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEILKINPKDEATYVLL 658
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S++YA +W +V+ +R++M+EKGV+K+PG SWI+++ VH FS P I L
Sbjct: 659 SNMYAGAKQWANVASIRKSMKEKGVKKEPGLSWIEHQGDVHFFSVGSSDHPDMKLINGML 718
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP-IRVVKN 603
E LN K + GYVPD ++VL D++ EK K L HSE+LA+A+GL+ +P I ++KN
Sbjct: 719 EWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKN 778
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LR+CSDCH+A K IS I QR++++RD RFH F G CSC D W
Sbjct: 779 LRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCDDHW 822
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 119/458 (25%), Positives = 218/458 (47%), Gaps = 38/458 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VS+ L G+A D V +Y+ + ++G L+ F++ L + S ++
Sbjct: 110 MPERNNVSYVTLTQGYACQ----DPVGLYSRLHREG-HELNPHVFTSFLKLFVSLDKAEI 164
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+H I+K G+ S FVG+ L++ Y+ G + A+ F+ + K+IV++ +++ +
Sbjct: 165 CWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVE 224
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G E+S + L M ++G + +TF +
Sbjct: 225 NGCFEDS-------------------------------LQLLSRMGMDGFMPNNYTFDTA 253
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A GL A K +H I++ ++ + VG L+ +Y + + A VF M +V
Sbjct: 254 LKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDV 313
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V W+ M+ + QNG +AV IF M+ + P++FTL S+++ CA G Q HG
Sbjct: 314 VPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGL 373
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ G + VSNAL+ Y KC ++ + +LF E++ ++ VSW ++ GY G+ +
Sbjct: 374 VVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKA 433
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+++F + L + + EVT L AC+ +E G + +K + + + +ID
Sbjct: 434 LNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNS-LID 492
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ ++ G ++ A++ N+M D W L+S HG
Sbjct: 493 MYAKCGDIKVAQTVFNEME-TIDVASWNALISGYSTHG 529
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 184/413 (44%), Gaps = 47/413 (11%)
Query: 44 TFSTMLIMSSSRRCVDL-----GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKR 98
+ TML RRC+ + IH ILK G +F + L++ Y K G DA
Sbjct: 51 AYGTML-----RRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALN 105
Query: 99 GFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREA 158
FDE+PE+N V Y T+ G ++
Sbjct: 106 LFDEMPERNNVSYVTLTQGYAC-----------------------------------QDP 130
Query: 159 IDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDM 218
+ L+ + EG ++ F S L L E +H+ I++ + N FVG+AL++
Sbjct: 131 VGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGAALINA 190
Query: 219 YCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
Y C S+ A SVF + K++V W ++ Y +NGC E+++++ M +G P+++T
Sbjct: 191 YSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTF 250
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
+ + + L + HG+ L T V L+ Y + G++ D+ ++FNEM
Sbjct: 251 DTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPK 310
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
D V W+ +++ + + G N+ +D+F +M + P+E TL +L+ C+ G
Sbjct: 311 NDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQL 370
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
++VK G +ID+ ++ +++ A ++ + + W T++
Sbjct: 371 HGLVVK-VGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELS-SKNVVSWNTVI 421
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 121/282 (42%), Gaps = 8/282 (2%)
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
+D +G++L C K IH I++ ++F + L++ Y K K A ++
Sbjct: 47 LDSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASL 291
F M +N VS+ + GY ++ V ++ + R G E + S + +L
Sbjct: 107 FDEMPERNNVSYVTLTQGYA----CQDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKA 162
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
E H + G S V AL+ Y CG+++ + +F + +D V W +VS Y
Sbjct: 163 EICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCY 222
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH-YFEIMVKEYGIRP 410
+ G +++ L +M G P+ T L A G + + +I+ Y + P
Sbjct: 223 VENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDP 282
Query: 411 IHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
++ + ++ G + +A N+MP D + W+ +++
Sbjct: 283 RVG--VGLLQLYTQLGDMSDAFKVFNEMP-KNDVVPWSFMIA 321
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 88/222 (39%), Gaps = 13/222 (5%)
Query: 274 DDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLF 333
D G+++ C H L G + +N L+ Y K G +D+ LF
Sbjct: 48 DSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 334 NEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM--LSHGLKPDEVT-LIGVLSACSRAG 390
+EM R+ VS+ L GYA + + L+ ++ H L P T + + + +A
Sbjct: 108 DEMPERNNVSYVTLTQGYA----CQDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATL 450
+ + + + G +I+ S G ++ A+S + D + WA +
Sbjct: 164 IC----WWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGI-LCKDIVVWAGI 218
Query: 451 LSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKG 492
+ SC + S + +D + P +Y +++ AS G
Sbjct: 219 V-SCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIG 259
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/649 (36%), Positives = 386/649 (59%), Gaps = 19/649 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +SWN L+SG+ +G +++A KV++LM + + ++++ ++ VD+
Sbjct: 74 MPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNV-----VSWTALVKGYVHNGKVDV 128
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+ + + S+ ++ + + G I DA + ++ +P+K+ + +MI GL +
Sbjct: 129 AESLFWKMPEKNKVSWTV----MLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCK 184
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G V+E+R +F M ++ I+WTTM+TG QN +A +F M + + ++ S+
Sbjct: 185 EGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSM 240
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L +E+ +++ + V +A++ + I A VF +M +N
Sbjct: 241 LMGYVQNGRIEDAEELFEVMPVKP----VIACNAMISGLGQKGEIAKARRVFDSMKERND 296
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
SW ++ + +NG EA+ +F MQ+ G+ P TL S++S CA+LASL G Q H +
Sbjct: 297 ASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQ 356
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ + V++ L+T Y KCG + S +F+ +D + W +++SGYA G E
Sbjct: 357 LVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEA 416
Query: 361 IDLFEKM-LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ +F +M LS KP+EVT + LSACS AG+VE+G +E M +G++PI HY CM+
Sbjct: 417 LKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMV 476
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L RAGR EA I+ M PDA W +LL +CR H +++ ++ A+ L+E++P N
Sbjct: 477 DMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSG 536
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS-PYSD 538
+Y+LLS++YAS+G+W V++LR+ M+ + VRK PGCSW + +++VH F+ +S P +
Sbjct: 537 TYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQE 596
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
I L++L+ + + GY PD S LHDV+ EK+ L +HSE+LA+A+ LL + G+PI
Sbjct: 597 SILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPI 656
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RV+KNLRVCSDCH A K ISK+ +REI++RDA RFH F+NGECSC D+W
Sbjct: 657 RVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 191/367 (52%), Gaps = 24/367 (6%)
Query: 95 DAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGL 154
DA++ FDE+P++NI+ +N +++G ++ G ++E+R++F M +++ +SWT ++ G + NG
Sbjct: 66 DARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGK 125
Query: 155 EREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSA 214
A LF +M + ++ ++ +L +++ +++ I KDN+ ++
Sbjct: 126 VDVAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDACKLYEMI---PDKDNI-ARTS 177
Query: 215 LVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD 274
++ CK + A +F M+ ++V++WT M+ GYGQN ++A KIF M E
Sbjct: 178 MIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP----EKT 233
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN 334
+ + S++ +E+ + V +I+ NA+++ G+ G I + R+F+
Sbjct: 234 EVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIA----CNAMISGLGQKGEIAKARRVFD 289
Query: 335 EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEK 394
M R++ SW ++ + + G E +DLF M G++P TLI +LS C+ +
Sbjct: 290 SMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHH 349
Query: 395 GRHYFEIMVK-EYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
G+ +V+ ++ + D Y + ++ + + G L ++K ++ P D I W +++
Sbjct: 350 GKQVHAQLVRCQFDV----DVYVASVLMTMYIKCGELVKSKLIFDRFP-SKDIIMWNSII 404
Query: 452 SSCRIHG 458
S HG
Sbjct: 405 SGYASHG 411
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 168/363 (46%), Gaps = 28/363 (7%)
Query: 112 NTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLA 171
N IT L R G + E+R+LF K SW +M+ G N + R+A LF EM +
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI- 79
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
++ +++ ++E +++ + + NV +ALV Y + AES+
Sbjct: 80 ---ISWNGLVSGYMKNGEIDEARKVFDLM----PERNVVSWTALVKGYVHNGKVDVAESL 132
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASL 291
F M KN VSWT ML+G+ Q+G ++A K++ + + D+ S+I +
Sbjct: 133 FWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIP----DKDNIARTSMIHGLCKEGRV 188
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
+E + +I++ T +VT YG+ ++D+ ++F+ M + EVSWT+++ GY
Sbjct: 189 DEAREIFDEMSERSVITWTT----MVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGY 244
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
+ G+ + +LFE M +KP + ++S + G + K R F+ M KE
Sbjct: 245 VQNGRIEDAEELFEVM---PVKP-VIACNAMISGLGQKGEIAKARRVFDSM-KERN---- 295
Query: 412 HDHYTCMIDILSRAG-RLEEAKSFI--NKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
+ +I I R G LE FI K P ++LS C ++ GK
Sbjct: 296 DASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHA 355
Query: 469 SLL 471
L+
Sbjct: 356 QLV 358
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 67/140 (47%), Gaps = 10/140 (7%)
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG 371
+N +T + G I ++ +LF+ + + SW ++V+GY + LF++M
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRN 78
Query: 372 LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEA 431
+ ++ G++S + G +++ R F++M + + +T ++ G+++ A
Sbjct: 79 I----ISWNGLVSGYMKNGEIDEARKVFDLMPERNVV-----SWTALVKGYVHNGKVDVA 129
Query: 432 KSFINKMPFPPDAIGWATLL 451
+S KMP + + W +L
Sbjct: 130 ESLFWKMP-EKNKVSWTVML 148
>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 472
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 210/476 (44%), Positives = 319/476 (67%), Gaps = 6/476 (1%)
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
+FT+ +LTA L + ++HA +++ +++ + VG+AL+D Y K ++ A VF
Sbjct: 1 EFTYSVILTA----LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFS 56
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL-ASLE 292
+ K++V+W+AML GY Q G +E A+K+F + + GI+P++FT S+++ CA AS+
Sbjct: 57 GIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMG 116
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
+G QFHG ++ + L S + VS+AL+T Y K GNIE + +F +D VSW +++SGYA
Sbjct: 117 QGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYA 176
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
+ G+A + +D+F++M +K D VT IGV +AC+ AGLVE+G YF+IMV++ I P
Sbjct: 177 QHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTK 236
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLE 472
+H +CM+D+ SRAG+LE+A I MP P + W T+L++CR+H E+G+ AAE ++
Sbjct: 237 EHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIA 296
Query: 473 LDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDW 532
+ P + A+YVLLS++YA G W +++R+ M E+ V+K+PG SWI+ K++ + F A D
Sbjct: 297 MKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDR 356
Query: 533 SSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFI 592
S P DQIY +LE L+ ++ GY PD S VL D++ K +L HSE+LAIAFGL+
Sbjct: 357 SHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIAT 416
Query: 593 PPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLF-KNGECSCGDFW 647
P G P+ ++KNLRVC DCH K I+KI +REI+VRD+ RFH F +G CSCGDFW
Sbjct: 417 PKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 472
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 138/276 (50%), Gaps = 33/276 (11%)
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
++H ++K + VG+ L+D Y KLG
Sbjct: 18 EVHAQVVKTNYERSSTVGTALLDAYVKLGK------------------------------ 47
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
VEE+ ++F G+ DKD ++W+ M+ G Q G AI +F E+ G+ ++FTF S+L
Sbjct: 48 -VEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILN 106
Query: 183 ACGGLLA-LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
C A + +GKQ H F I++ ++ V SAL+ MY K +I+ AE VF+ K++V
Sbjct: 107 VCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLV 166
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW +M+ GY Q+G + +A+ +F M++ ++ D T V ++C + +EEG ++
Sbjct: 167 SWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIM 226
Query: 302 LVTGLISFITVSNA-LVTFYGKCGNIEDSHRLFNEM 336
+ I+ N+ +V Y + G +E + ++ M
Sbjct: 227 VRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENM 262
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 163/378 (43%), Gaps = 87/378 (23%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTML-IMSSSRRCVDLGRQ 63
D V+W+ +++G+A G A+K++ + K G+ + TFS++L + +++ + G+Q
Sbjct: 62 DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGI-KPNEFTFSSILNVCAATNASMGQGKQ 120
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
HG +K S + V S L+ MYAK +G
Sbjct: 121 FHGFAIKSRLDSSLCVSSALLTMYAK-------------------------------KGN 149
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
+E + +F+ ++KD +SW +MI+G Q+G +A+D+F+EM+ + MD TF V A
Sbjct: 150 IESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAA 209
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C +EEG++ ++R+ CK K S
Sbjct: 210 CTHAGLVEEGEKYFDIMVRD----------------CKIAPTKEHNS------------- 240
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL-GSVISSCANLASLEEGTQFHGRSL 302
M+ Y + G E+A+K+ NM P T+ +++++C + + T+ GR
Sbjct: 241 -CMVDLYSRAGQLEKAMKVIENMPN----PAGSTIWRTILAAC----RVHKKTEL-GRLA 290
Query: 303 VTGLISFITVSNA----LVTFYGKCGNIEDS---HRLFNEMNVRDEVSWTALVSGYAKFG 355
+I+ +A L Y + G+ ++ +L NE NV+ E GY+
Sbjct: 291 AEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKE-------PGYSWIE 343
Query: 356 KANETIDLFEKMLSHGLK 373
N+T SH LK
Sbjct: 344 VKNKTYSFLAGDRSHPLK 361
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/641 (36%), Positives = 357/641 (55%), Gaps = 33/641 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
SWN + A +A+ +Y ML G + + TF +S G Q+HG
Sbjct: 22 ASWNARLRELARQRHFQEALNLYCQMLASG-DSPNAFTFPFAFKSCASLSLPLAGSQLHG 80
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
H++K G FV + L+ MY K I A++ FDE
Sbjct: 81 HVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDE---------------------NHH 119
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
SR L ++ + +I G N +A+ LFR+MR EG++++ T ++ C G
Sbjct: 120 SRNL--------AVCYNALIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAG 171
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+ L G +HA +R ++ VG+ L+ MY +C S+ +A +F M K +++W AM
Sbjct: 172 PIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAM 231
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ GY QNG + + ++ M+ GI PD TL V+SSCA+L + G + R ++G
Sbjct: 232 ISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGF 291
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ NAL+ Y +CGN+ + +F+ M ++ +SWTA+++GY G+ + LF++
Sbjct: 292 GFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDE 351
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M+S PD + VLSACS AGL EKG +YF M ++YG++P +HY+C++D+L RAG
Sbjct: 352 MISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAG 411
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
RLEEA+ I M PD W LL +C+IH NVE+ + A E ++E +P N YVLLS+
Sbjct: 412 RLEEARKLIGSMSVEPDGAVWGALLGACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSN 471
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
I++ G + + ++R MRE+ ++K+PGCS+++Y+ R+H+F A D + P + +IY L+
Sbjct: 472 IFSEAGNMEGILRVRVMMRERKLKKEPGCSYVEYQGRIHLFLAGDRTHPQAQEIYHMLDG 531
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
L + + G D + EL I + HSEKLAIAFGL+ PG I V+KNLRV
Sbjct: 532 LEDIIKRRGGSNDNDQESRNEEL---ITGMGVHSEKLAIAFGLINTEPGTEITVIKNLRV 588
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCH K +S+I R+++VRDA RFH FKNG CSC D+W
Sbjct: 589 CGDCHLFLKLVSEIVDRQLVVRDATRFHHFKNGVCSCKDYW 629
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 6/201 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP ++WN +ISG+A +G + +Y M G+ +T +L +
Sbjct: 220 MPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVP-DPVTLVGVLSSCAHLGAHAA 278
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR++ I GFG F+ + L++MYA+ G + A+ FD + EKN++ + +I G
Sbjct: 279 GREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGM 338
Query: 121 RGLVEESRRLFRGMKDKDSI----SWTTMITGLMQNGLEREAIDLFREM-RLEGLAMDQF 175
G E + +LF M D + ++ ++++ GL + + F M R GL
Sbjct: 339 HGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPE 398
Query: 176 TFGSVLTACGGLLALEEGKQI 196
+ V+ G LEE +++
Sbjct: 399 HYSCVVDLLGRAGRLEEARKL 419
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 250/648 (38%), Positives = 372/648 (57%), Gaps = 38/648 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSWN LISG + DA + + M + G S T + L +S + LG QI
Sbjct: 925 DSVSWNSLISGLDQNECSEDAAESFLRMRRTG-SMPSNFTLISTLSSCASLGWIMLGEQI 983
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H LK G + V V + L+ +YA+ G + + F +PE
Sbjct: 984 HCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEY------------------ 1025
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLE-REAIDLFREMRLEGLAMDQFTFGSVLTA 183
D +SW ++I L + +A+ F EM G + + TF ++L+A
Sbjct: 1026 -------------DQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSA 1072
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA-WKNVVS 242
L E QIHA +++ D+ +G+AL+ Y KC + E +F M+ ++ VS
Sbjct: 1073 VSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVS 1132
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL 302
W +M+ GY N +A+ + M + G D FT +V+S+CA++A+LE G + H +
Sbjct: 1133 WNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGI 1192
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
+ S + V +ALV Y KCG I+ + R F M +R+ SW +++SGYA+ G + +
Sbjct: 1193 RACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALK 1252
Query: 363 LFEKMLSHGLKPDEVT-LIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
LF +M+ G PD V L+GVLSACS G VE+G +F+ M + Y + P +H++CM+D+
Sbjct: 1253 LFTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDL 1312
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC-RIHG-NVEIGKWAAESLLELDPYNPA 479
L RAG+L+E FIN MP P+ + W T+L +C R +G N E+G+ AAE LLEL+P N
Sbjct: 1313 LGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAV 1372
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+YVLL+++YAS KW+ V++ R M+E V+K+ GCSW+ K VH+F A D P D
Sbjct: 1373 NYVLLANMYASGEKWEDVAKARXAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDX 1432
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY +L +LNRKM GY+P L D+EL K ++L++HSEK+A+AF +L LPIR
Sbjct: 1433 IYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSALPIR 1491
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
++KNLRVC DCH+A YISKI R+I++RD+ RFH F++G+CSCGD+W
Sbjct: 1492 IMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 1539
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 158/589 (26%), Positives = 269/589 (45%), Gaps = 70/589 (11%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLG---NLSRITFSTMLIMSSSRRCVDLG 61
+ +SWN +IS ++ G A +++ M K+GLG + TF +++ + S VD G
Sbjct: 713 NSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSS--VDFG 770
Query: 62 ----RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
Q+ + K GF ++VGS LV +G
Sbjct: 771 LCVLEQMLARVEKSGFLQDLYVGSALV-------------------------------SG 799
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR-LEGLAMDQFT 176
R GL ++++ +F M ++ +S ++ GL++ A +F EM+ L G+ D +
Sbjct: 800 FARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYV 859
Query: 177 FGSVLTACGGLLALEEGK----QIHAFIIRNDHKDN-VFVGSALVDMYCKCKSIKYAESV 231
+L+A LEEG+ ++HA +IR DN V +G+ LV+MY K +I A SV
Sbjct: 860 V--LLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSV 917
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASL 291
F M K+ VSW +++ G QN CSE+A + F M+R G P +FTL S +SSCA+L +
Sbjct: 918 FELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWI 977
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
G Q H L GL + ++VSNAL+ Y + G + ++F+ M D+VSW +++
Sbjct: 978 MLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGAL 1037
Query: 352 AKF-GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP 410
+ ++ + F +M+ G VT I +LSA S L E H +V +Y +
Sbjct: 1038 SDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVS-HQIHALVLKYCLSD 1096
Query: 411 IHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC----RIHGNVEIGKWA 466
++ + G + E + +M D + W +++S +H +++ +
Sbjct: 1097 DTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFM 1156
Query: 467 AESLLELDPYNPASYVLLSSIYAS--KGKWDHVSQLRRTMREKGVRKDP------GCSWI 518
+ LD + A+ + + A+ +G H +R M V C I
Sbjct: 1157 MQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRI 1216
Query: 519 KYKSRV-------HIFSADDWSSPYSDQIYAELE-KLNRKMIKEGYVPD 559
Y SR +++S + S Y+ + E KL +M+ +G PD
Sbjct: 1217 DYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPD 1265
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/345 (33%), Positives = 177/345 (51%), Gaps = 34/345 (9%)
Query: 1 MPFHDGVSWNLLISGHA-SHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
MP +D VSWN +I + S SV+ AVK + M++ G G LSR+TF +L SS +
Sbjct: 1022 MPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWG-LSRVTFINILSAVSSLSLHE 1080
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+ QIH +LK+ +G+ L+ Y K G + + ++ F + E
Sbjct: 1081 VSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSET------------- 1127
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+D +SW +MI+G + N L +A+DL M +G +D FTF +
Sbjct: 1128 -----------------RDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFAT 1170
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL+AC + LE G ++HA IR + +V VGSALVDMY KC I YA F M +N
Sbjct: 1171 VLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRN 1230
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFT-LGSVISSCANLASLEEGTQ-F 297
V SW +M+ GY ++G E+A+K+F M +G PD L V+S+C+++ +EEG + F
Sbjct: 1231 VYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEGFEHF 1290
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
S V L + + +V G+ G +++ N M ++ V
Sbjct: 1291 KSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNV 1335
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 222/463 (47%), Gaps = 59/463 (12%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
TF +++ C + R++H +K+GF +F+ + L+++Y ++G + A++ FDE+
Sbjct: 546 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 605
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
+N+V + +I+G QNG EA FR
Sbjct: 606 SNRNLVTWACLISG-------------------------------YTQNGKPDEACARFR 634
Query: 164 EMRLEGLAMDQFTFGSVLTAC--GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK 221
+M G + + FGS L AC G + G QIH I + + +V V + L+ MY
Sbjct: 635 DMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGS 694
Query: 222 C-KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGI----EPDDF 276
C S A SVF + +N +SW +++ Y + G A +F +MQ+ G+ +P+++
Sbjct: 695 CLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEY 754
Query: 277 TLGSVISSCANLASLEEG----TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRL 332
T GS+I+ A +S++ G Q R +G + + V +ALV+ + + G +D+ +
Sbjct: 755 TFGSLIT--AACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNI 812
Query: 333 FNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH-GLKPDEVTLIGVLSACSRAGL 391
F +M VR+ VS L+ G K + +F +M G+ D ++ LSA S +
Sbjct: 813 FEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVL--LSAFSEFSV 870
Query: 392 VEKGRHYFEIMVKEYGIRP-IHDHYTC----MIDILSRAGRLEEAKSFINKMPFPPDAIG 446
+E+GR V + IR ++D+ ++++ +++G + +A S M D++
Sbjct: 871 LEEGRRKGR-EVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELM-VEKDSVS 928
Query: 447 WATLLSSCRIHGNVEIGKWAAESLLELDPYN--PASYVLLSSI 487
W +L+S + E + AAES L + P+++ L+S++
Sbjct: 929 WNSLISGLDQN---ECSEDAAESFLRMRRTGSMPSNFTLISTL 968
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 193/408 (47%), Gaps = 53/408 (12%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDG-LGNLSRITFSTMLIMSSSRRCVDLGRQIH 65
V+W LISG+ +G ++A + M++ G + N + S LG QIH
Sbjct: 611 VTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIH 670
Query: 66 GHILKFGFGSYVFVGSPLVDMYAK-LGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
G I K +GS V V + L+ MY L DA+ FD + +N + +N++I+ RRG
Sbjct: 671 GLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRG-- 728
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM----DQFTFGSV 180
D +S A DLF M+ EGL +++TFGS+
Sbjct: 729 -------------DXVS----------------AYDLFSSMQKEGLGFSFKPNEYTFGSL 759
Query: 181 LT-ACG----GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
+T AC GL LE Q+ A + ++ +++VGSALV + + A+++F M
Sbjct: 760 ITAACSSVDFGLCVLE---QMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQM 816
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR-NGIEPDDFTLGSVISSCANLASLEE- 293
+NVVS ++VG + E A K+F M+ GI D + + ++S+ + + LEE
Sbjct: 817 GVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVV--LLSAFSEFSVLEEG 874
Query: 294 ---GTQFHGRSLVTGL-ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
G + H + TGL + + + N LV Y K G I D+ +F M +D VSW +L+S
Sbjct: 875 RRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLIS 934
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH 397
G + + + + F +M G P TLI LS+C+ G + G
Sbjct: 935 GLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQ 982
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 167/344 (48%), Gaps = 22/344 (6%)
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
TF S++ G EE +++H I+ N+F+ + L+++Y + + A+ +F M
Sbjct: 546 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 605
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC--ANLASLEE 293
+ +N+V+W ++ GY QNG +EA F +M R G P+ + GS + +C + + +
Sbjct: 606 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL 665
Query: 294 GTQFHGRSLVTGLISFITVSNALVTFYGKC-GNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
G Q HG T S + V N L++ YG C + D+ +F+ + +R+ +SW +++S Y+
Sbjct: 666 GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYS 725
Query: 353 KFGKANETIDLFEKMLSHGL----KPDEVTLIGVLS-ACSRAGLVEKGRHYFEIM---VK 404
+ G DLF M GL KP+E T +++ ACS V+ G E M V+
Sbjct: 726 RRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSS---VDFGLCVLEQMLARVE 782
Query: 405 EYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
+ G + D Y + ++ +R G ++AK+ +M + + L+ E
Sbjct: 783 KSGF--LQDLYVGSALVSGFARFGLTDDAKNIFEQMGV-RNVVSMNGLMVGLVKQKQGEA 839
Query: 463 GKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMRE 506
+ +L N SYV+L S ++ ++ + + RR RE
Sbjct: 840 AAKVFHEMKDLVGINSDSYVVLLSAFS---EFSVLEEGRRKGRE 880
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/499 (43%), Positives = 316/499 (63%)
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
R++F M +D +SW T+I+G QNG+ +A+ + REM L D FT SVL
Sbjct: 150 RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEY 209
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
+ L +GK+IH + IRN + +VF+GS+L+DMY KC + + VF + + +SW +++
Sbjct: 210 VNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSII 269
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
G QNG +E +K F M I+P+ + S++ +CA+L +L G Q HG + +
Sbjct: 270 AGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFD 329
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
+ +++ALV Y KCGNI + +F++M + D VSWTA++ GYA G A + I LF++M
Sbjct: 330 GNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRM 389
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
G+KP+ V + VL+ACS AGLV++ YF M ++Y I P +HY + D+L R GR
Sbjct: 390 EVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGR 449
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSI 487
LEEA FI+ M P W+TLL++CR+H N+E+ + ++ L +DP N +YVLLS+I
Sbjct: 450 LEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNI 509
Query: 488 YASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKL 547
Y++ G+W +LR MR+KG++K P CSWI+ K++VH F A D S PY D+I L+ L
Sbjct: 510 YSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVL 569
Query: 548 NRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVC 607
+M +EGYV D + VLHDVE +K +L HSE+LAI FG++ P G IRV KNLRVC
Sbjct: 570 LEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVC 629
Query: 608 SDCHNATKYISKITQREIL 626
DCH ATK+ISKI REI+
Sbjct: 630 VDCHTATKFISKIVGREIV 648
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 201/377 (53%), Gaps = 54/377 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLS----RITFSTMLIMSSSRR 56
MP D VSWN +ISG+A +G DA LM+ +GN T S++L + +
Sbjct: 156 MPKRDIVSWNTVISGNAQNGMHEDA-----LMMVREMGNADLRPDSFTLSSVLPIFAEYV 210
Query: 57 CVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMIT 116
+ G++IHG+ ++ G+ + VF+GS L+DMYAK + D+ R F LP+
Sbjct: 211 NLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQH---------- 260
Query: 117 GLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
D ISW ++I G +QNG+ E + F++M + + + +
Sbjct: 261 ---------------------DGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVS 299
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
F S++ AC L L GKQ+H +IIR+ NVF+ SALVDMY KC +I+ A +F M
Sbjct: 300 FSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKME 359
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
++VSWTAM++GY +G + +A+ +F M+ G++P+ +V+++C++ ++E +
Sbjct: 360 LYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWK 419
Query: 297 F-----HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSG 350
+ ++ GL + V++ L G+ G +E+++ ++M++ S W+ L++
Sbjct: 420 YFNSMTQDYRIIPGLEHYAAVADLL----GRVGRLEEAYEFISDMHIEPTGSVWSTLLAA 475
Query: 351 YAKFGKANETIDLFEKM 367
+ ++ I+L EK+
Sbjct: 476 ----CRVHKNIELAEKV 488
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/601 (37%), Positives = 358/601 (59%), Gaps = 36/601 (5%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
T+S ++ S R V G I H+ G +F+ + L++MY K L+ DA
Sbjct: 15 TYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDA------- 67
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
+LF M ++ ISWTTMI+ + + ++A++L
Sbjct: 68 ------------------------HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLV 103
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
M +G+ + +T+ SVL AC G+ + + +H II+ + +V+V SAL+D++ K
Sbjct: 104 LMLRDGVRPNVYTYSSVLRACNGM---SDVRMLHCGIIKEGLESDVYVRSALIDVFAKLG 160
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
+ A SVF M + + W +++ G+ QN S+ A+++F M+R G + TL SV+
Sbjct: 161 EPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLR 220
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+C LA LE G Q H + + ++NALV Y KCG++ED+ R+FN+M RD ++
Sbjct: 221 ACTGLALLELGMQAHVH--IVKYDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVIT 278
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
W+ ++SG A+ G + E + LFE M S G KP+ +T++GVL ACS AGL+E G +YF M
Sbjct: 279 WSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMK 338
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
K YGI P +HY CMID+L +AG+L++A +N+M PDA+ W TLL +CR+ N+ +
Sbjct: 339 KLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLA 398
Query: 464 KWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSR 523
++AA+ ++ LDP + +Y +LS+IYA+ KWD V ++R+ MR+ G++K+PGCSWI+ +
Sbjct: 399 EYAAKKVIALDPEDAGTYTVLSNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQ 458
Query: 524 VHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKL 583
+H F D S P ++ +L +L ++I GYVP+ + VL D+E + L HHSEKL
Sbjct: 459 IHAFIIGDESHPQIVEVNKKLNQLIHRLIGIGYVPETNFVLQDLEGEQMEDSLRHHSEKL 518
Query: 584 AIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSC 643
A+AFGL+ +P IR+ KNLR+C DCH K SK+ R I++RD +R+H F++G+CSC
Sbjct: 519 ALAFGLMTLPSEKVIRIRKNLRICGDCHVFCKLASKLENRNIVIRDPIRYHHFQDGKCSC 578
Query: 644 G 644
G
Sbjct: 579 G 579
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 117/354 (33%), Positives = 184/354 (51%), Gaps = 43/354 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +SW +IS ++ A+++ LML+DG+ + T+S++L R C +
Sbjct: 74 MPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGV-RPNVYTYSSVL-----RACNGM 127
Query: 61 G--RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
R +H I+K G S V+V S L+D++AKLG DA FDE M+TG
Sbjct: 128 SDVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDE-----------MVTG- 175
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
D+I W ++I G QN A++LF+ M+ G +Q T
Sbjct: 176 -------------------DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLT 216
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
SVL AC GL LE G Q H I++ D ++ + +ALVDMYCKC S++ A VF M +
Sbjct: 217 SVLRACTGLALLELGMQAHVHIVKYDQ--DLILNNALVDMYCKCGSLEDARRVFNQMKER 274
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQF 297
+V++W+ M+ G QNG S+EA+K+F M+ +G +P+ T+ V+ +C++ LE+G F
Sbjct: 275 DVITWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYF 334
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
+ G+ ++ GK G ++D+ +L NEM D V+W L+
Sbjct: 335 RSMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 388
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 153/290 (52%), Gaps = 7/290 (2%)
Query: 169 GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYA 228
GL D T+ ++ C A+ EG I + N H+ +F+ + L++MY K + A
Sbjct: 8 GLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDA 67
Query: 229 ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL 288
+F M +NV+SWT M+ Y + ++A+++ M R+G+ P+ +T SV+ +C +
Sbjct: 68 HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNGM 127
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
+ + H + GL S + V +AL+ + K G ED+ +F+EM D + W +++
Sbjct: 128 SDVR---MLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSII 184
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
G+A+ +++ ++LF++M G ++ TL VL AC+ L+E G +VK Y
Sbjct: 185 GGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK-YDQ 243
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
I ++ ++D+ + G LE+A+ N+M D I W+T++S +G
Sbjct: 244 DLILNN--ALVDMYCKCGSLEDARRVFNQMK-ERDVITWSTMISGLAQNG 290
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 93/187 (49%), Gaps = 5/187 (2%)
Query: 265 NMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCG 324
++Q +G+ D T +I C + ++ EG G + + N L+ Y K
Sbjct: 3 SLQSHGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFN 62
Query: 325 NIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
+ D+H+LF++M R+ +SWT ++S Y+K + ++L ML G++P+ T VL
Sbjct: 63 LLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLR 122
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDA 444
AC+ V R ++KE G+ + +ID+ ++ G E+A S ++M DA
Sbjct: 123 ACNGMSDV---RMLHCGIIKE-GLESDVYVRSALIDVFAKLGEPEDALSVFDEM-VTGDA 177
Query: 445 IGWATLL 451
I W +++
Sbjct: 178 IVWNSII 184
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 108/234 (46%), Gaps = 20/234 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D ++W+ +ISG A +G +A+K++ LM G + IT +L S ++
Sbjct: 271 MKERDVITWSTMISGLAQNGYSQEALKLFELMKSSG-TKPNYITIVGVLFACSHAGLLED 329
Query: 61 GRQIHGHILK-FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITGL 118
G + K +G ++D+ K G + DA + +E+ E + V + T++
Sbjct: 330 GWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGAC 389
Query: 119 -LRRGLV--EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE-MRLEGLAMDQ 174
++R +V E + + + +D+ ++ T+++ + N + ++++ R+ MR G+ +
Sbjct: 390 RVQRNMVLAEYAAKKVIALDPEDAGTY-TVLSNIYANSQKWDSVEEIRKRMRDIGIKKEP 448
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRND-HKDNVFVGSALVDMYCKCKSIKY 227
G +E KQIHAFII ++ H V V L + + I Y
Sbjct: 449 -----------GCSWIEVNKQIHAFIIGDESHPQIVEVNKKLNQLIHRLIGIGY 491
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 241/681 (35%), Positives = 369/681 (54%), Gaps = 65/681 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVY-NLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
+P + +WN LI +AS ++ + +++ + ++ TF ++ ++ +
Sbjct: 91 IPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLS 150
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
LG+ +HG +K GS VFV + L+ Y G +
Sbjct: 151 LGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDL-------------------------- 184
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ + ++F +K+KD +SW +MI G +Q G +A++LF++M E + T
Sbjct: 185 -----DSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVG 239
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL+AC + LE G+++ ++I N N+ + +A++DMY KC SI+ A+ +F M K+
Sbjct: 240 VLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKD 299
Query: 240 VVSWTAMLVGYG-------------------------------QNGCSEEAVKIFCNMQ- 267
V+WT ML GY QNG EA+ +F +Q
Sbjct: 300 NVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQL 359
Query: 268 RNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIE 327
+ I+ + TL S +S+CA + +LE G H G+ V++AL+ Y KCG++E
Sbjct: 360 QKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLE 419
Query: 328 DSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS 387
+ +FN + RD W+A++ G A G +E +D+F KM +KP+ VT V ACS
Sbjct: 420 KAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACS 479
Query: 388 RAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGW 447
GLV++ F M YGI P HY C++D+L R+G LE+A FI MP PP W
Sbjct: 480 HTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVW 539
Query: 448 ATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREK 507
LL +C+IH N+ + + A LLEL+P N ++VLLS+IYA GKWD+VS+LR+ MR
Sbjct: 540 GALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVT 599
Query: 508 GVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDV 567
G++K+PGCS I+ +H F + D + P S+++Y +L ++ K+ GY P+MS VL +
Sbjct: 600 GLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEMSHVLQII 659
Query: 568 ELSE-KIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREIL 626
E E K + LN HSEKLAI +GL+ IRV+KNLR+C DCH K IS++ REI+
Sbjct: 660 EEEEMKEQSLNLHSEKLAICYGLISTEAPKAIRVIKNLRMCGDCHAVAKLISQLYNREII 719
Query: 627 VRDAVRFHLFKNGECSCGDFW 647
VRD RFH F+NG+CSC DFW
Sbjct: 720 VRDRYRFHHFRNGQCSCNDFW 740
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 205/441 (46%), Gaps = 71/441 (16%)
Query: 56 RCVDLG--RQIHGHILKFGFGSYVFVGSPLVDMYA--KLGLIYDAKRGFDELPEKNIVMY 111
RC L +Q H H+++ G S + S L + A + A++ FDE+P+ N +
Sbjct: 40 RCSSLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTW 99
Query: 112 NTMITGLLRRGLVEESRRLFRGMKDKDSISWT--TMITGLMQNGLEREAIDLFREMRLEG 169
NT+I R + D W M++ Q
Sbjct: 100 NTLI-------------RAYASGPDPVCSIWAFLDMVSSESQ------------------ 128
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
+++TF ++ A + +L G+ +H I++ +VFV ++L+ Y C + A
Sbjct: 129 CYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSAC 188
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
VF T+ K+VVSW +M+ G+ Q G ++A+++F M+ ++ T+ V+S+CA +
Sbjct: 189 KVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIR 248
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT---- 345
LE G + + +T++NA++ Y KCG+IED+ RLF+ M +D V+WT
Sbjct: 249 DLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLD 308
Query: 346 ---------------------------ALVSGYAKFGKANETIDLFEKM-LSHGLKPDEV 377
AL+S Y + GK NE + +F ++ L +K +++
Sbjct: 309 GYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQI 368
Query: 378 TLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINK 437
TL+ LSAC++ G +E GR + +K+ GI+ + +I + S+ G LE+A+ N
Sbjct: 369 TLVSTLSACAQVGALELGR-WIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNS 427
Query: 438 MPFPPDAIGWATLLSSCRIHG 458
+ D W+ ++ +HG
Sbjct: 428 VE-KRDVFVWSAMIGGLAMHG 447
>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
Length = 1866
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 245/621 (39%), Positives = 356/621 (57%), Gaps = 34/621 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW LI+ A+ +N M + G+ + TFS +L + G Q+H
Sbjct: 96 VSWTSLITQLTRFKRPFKALTFFNHMRRSGVYP-NHYTFSAVLSACTDTTASVHGEQMHS 154
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+ K GF + VFV S LVDMYAK + A++ F+E+P +N+V
Sbjct: 155 LVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLV----------------- 197
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL-AMDQFTFGSVLTACG 185
SW TMI G +QN L +AI F+ + LE L A+D+ +F SV +AC
Sbjct: 198 --------------SWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACA 243
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
LE GKQ+H ++ + V++ ++L DMY KC +F ++VV+W
Sbjct: 244 NAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNI 303
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
M++ Y N E+A F M+R G PD+ + SV+ SCANLA+L +GT H + + +G
Sbjct: 304 MIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSG 363
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
+ + V+++L+T Y KCG++ D+ ++F E R+ V WTA+++ + G AN ++LFE
Sbjct: 364 FVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFE 423
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
+ML G+KPD +T + VLSACS G VE+G YF M+K +GI P H+HY C++D+LSRA
Sbjct: 424 QMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRA 483
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
G L+ AK FI MP PDA W LLS+CR H N+ +GK A L +L+P NP +YVLL
Sbjct: 484 GELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLC 543
Query: 486 SIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELE 545
+I G + ++RR M GVRK+PGCSWI K+ ++F+ D S + +IY LE
Sbjct: 544 NILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEMLE 603
Query: 546 KLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
KL + K+GYV + ++ E K + L +HSEK+A+AFGLL +P G PIR+ KNLR
Sbjct: 604 KLKELVKKKGYVAETEFAINTAE-EYKEQSLWYHSEKIALAFGLLSLPAGAPIRIKKNLR 662
Query: 606 VCSDCHNATKYISKITQREIL 626
C DCH K+ S+I REI+
Sbjct: 663 TCGDCHTVMKFASEIFAREII 683
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 186/362 (51%), Gaps = 8/362 (2%)
Query: 110 MYNTMITGLLRRGLVEESRRLFRGMKD--KDSISWTTMITGLMQNGLEREAIDLFREMRL 167
++N ++ + G V+++ LF D K+ +SWT++IT L + +A+ F MR
Sbjct: 64 LFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRR 123
Query: 168 EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY 227
G+ + +TF +VL+AC A G+Q+H+ + ++ VFV SALVDMY KC +
Sbjct: 124 SGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLM 183
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCN-MQRNGIEPDDFTLGSVISSCA 286
AE VF M +N+VSW M+VG+ QN ++A+ F + N D+ + SV S+CA
Sbjct: 184 AEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACA 243
Query: 287 NLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTA 346
N +LE G Q HG +L G+ + + ++N+L YGKCG D +LF+ RD V+W
Sbjct: 244 NAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNI 303
Query: 347 LVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY 406
++ Y + + F M G PDE + VL +C+ + +G +++
Sbjct: 304 MIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSG 363
Query: 407 GIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWA 466
++ + + +I + ++ G L +A + + + W ++++C+ HG+ W
Sbjct: 364 FVKNLR-VASSLITMYAKCGSLVDAFQIFEETE-DRNVVCWTAIIAACQQHGH---ANWV 418
Query: 467 AE 468
E
Sbjct: 419 VE 420
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 198/439 (45%), Gaps = 68/439 (15%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSWN +I G + + A+ + +L + L L ++FS++ ++ ++
Sbjct: 191 MPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEF 250
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+HG LK G + V++ + L DMY K GL D + F +++V +N MI +
Sbjct: 251 GKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYV- 309
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
N +A + F MR +G D+ ++ SV
Sbjct: 310 ------------------------------YNHNYEDACNSFWMMRRKGSIPDEASYSSV 339
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L +C L AL +G IH IIR+ N+ V S+L+ MY KC S+ A +F +NV
Sbjct: 340 LHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNV 399
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V WTA++ Q+G + V++F M R GI+PD T SV+S+C++ +EEG +
Sbjct: 400 VCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYF-- 457
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
N+++ +G I H + L+S + +A
Sbjct: 458 -------------NSMIKVHG----IYPGHEHY--------ACIVDLLSRAGELDRAKRF 492
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD-HYTCMI 419
I+L +KPD +LSAC + G+ E+ +K + + P + +Y +
Sbjct: 493 IELMP------IKPDASVWGALLSACRNHSNLIMGK---EVALKLFDLEPDNPGNYVLLC 543
Query: 420 DILSRAGRLEEAKSFINKM 438
+IL+R G L EA KM
Sbjct: 544 NILTRNGMLNEADEVRRKM 562
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 123/238 (51%), Gaps = 7/238 (2%)
Query: 174 QFTFGSVLTACGGLL----ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
Q F LT+ LL + QIH+ +I F+ + L+++Y KC S+
Sbjct: 23 QTPFLHPLTSLNSLLNCSRTSKHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTL 82
Query: 230 SVFRTMA--WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN 287
+F + KNVVSWT+++ + +A+ F +M+R+G+ P+ +T +V+S+C +
Sbjct: 83 LLFSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTD 142
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
+ G Q H G ++ + V +ALV Y KC ++ + ++F EM VR+ VSW +
Sbjct: 143 TTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTM 202
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKP-DEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
+ G+ + ++ I F+ +L L DEV+ V SAC+ AG +E G+ + +K
Sbjct: 203 IVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALK 260
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 105/247 (42%), Gaps = 39/247 (15%)
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM--NVRDEVSWTALVS 349
+ TQ H + + T L+S + N L+ Y KCG+++ + LF+ + ++ VSWT+L++
Sbjct: 44 KHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLIT 103
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE---- 405
+F + + + F M G+ P+ T VLSAC+ G ++ K
Sbjct: 104 QLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLA 163
Query: 406 --YGIRPIHDHYTCMIDILSRAGRLEEA----------------------------KSFI 435
+ + + D Y D+L EE K+ +
Sbjct: 164 EVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLL 223
Query: 436 NKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYV--LLSSIYASKGK 493
+ D + ++++ S+C GN+E GK L+L +N Y+ LS +Y G
Sbjct: 224 LENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLV-YINNSLSDMYGKCGL 282
Query: 494 WDHVSQL 500
++ V++L
Sbjct: 283 FNDVAKL 289
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/598 (39%), Positives = 347/598 (58%), Gaps = 72/598 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVK-VYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
MP D SWN ++SG A +A++ V ++ +D + L+ +F + L + +
Sbjct: 111 MPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFV--LNEYSFGSALSACAGLMDLS 168
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+G QIHG I K + V++GS LVDMY+K ++ A+R FD++ +NIV
Sbjct: 169 IGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIV---------- 218
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
SW ++IT QNG +A+++F M G+ D+ T S
Sbjct: 219 ---------------------SWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLAS 257
Query: 180 VLTACGGLLALEEGKQIHAFIIRND-HKDNVFVGSALVDMYCKCK--------------- 223
V +AC L A+ EG QIHA ++++D +++++ +G+ALVDMY KC+
Sbjct: 258 VASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLR 317
Query: 224 ----------------SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQ 267
S+K A +F M +NVVSW A++ GY QNG +EEAV++F ++
Sbjct: 318 DVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLK 377
Query: 268 RNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI------SFITVSNALVTFYG 321
R I P +T G+++++CANLA L+ G Q H L G S I V N+L+ Y
Sbjct: 378 RESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYM 437
Query: 322 KCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIG 381
KCG +ED +F M RD VSW A++ GYA+ G E +++F +ML G +PD VT+IG
Sbjct: 438 KCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIG 497
Query: 382 VLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFP 441
VLSACS AGLVE+GR YF+ M E+G+ P+ DHYTCM+D+L RAG L+EA + I MP
Sbjct: 498 VLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPME 557
Query: 442 PDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLR 501
PDA+ W +LL++C++HGN+ +GK+ AE LLE+DP N YVLLS++YA G+W V ++R
Sbjct: 558 PDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVR 617
Query: 502 RTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPD 559
+ MR+ GV K PGCSWI +S +H+F D P+ IY L+ L +M + GYVP+
Sbjct: 618 KQMRQMGVIKQPGCSWISIQSHLHVFMVKDKRHPHKKDIYLILKILTEQMKRVGYVPE 675
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 152/494 (30%), Positives = 260/494 (52%), Gaps = 21/494 (4%)
Query: 32 MLKDGLGNLSRI---TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYA 88
+++ +G+LS + F+ +L + V R +H I+K F S +F+ + LVD+Y
Sbjct: 6 LVRKVVGDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYG 65
Query: 89 KLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITG 148
K G + DA++ FD + ++N +N ++ L + G ++E+ LF+ M ++D SW M++G
Sbjct: 66 KCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSG 125
Query: 149 LMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDN 208
Q EA+ +M E +++++FGS L+AC GL+ L G QIH I ++ + +
Sbjct: 126 FAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLD 185
Query: 209 VFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR 268
V++GSALVDMY KC+ + A+ F M +N+VSW +++ Y QNG + +A+++F M
Sbjct: 186 VYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMN 245
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV-TGLISFITVSNALVTFYGKCGNIE 327
GIEPD+ TL SV S+CA+L+++ EG Q H R + + + + NALV Y KC +
Sbjct: 246 CGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVN 305
Query: 328 DSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS 387
++ +F+ M +RD VS T++VSGYAK +F M+ + V+ +++ +
Sbjct: 306 EARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNV----VSWNALIAGYT 361
Query: 388 RAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLE---EAKSFINKMPF---- 440
+ G E+ F +++K I P H + +++ + L+ +A + I K F
Sbjct: 362 QNGENEEAVRLF-LLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKS 420
Query: 441 --PPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVS 498
D +L+ G VE G+ E +LE D S+ + YA G
Sbjct: 421 GEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERD---NVSWNAMIVGYAQNGYGTEAL 477
Query: 499 QLRRTMREKGVRKD 512
++ R M G R D
Sbjct: 478 EIFREMLVSGERPD 491
>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Brachypodium distachyon]
Length = 796
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/650 (36%), Positives = 375/650 (57%), Gaps = 39/650 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCV-DLGRQ 63
D VSWN L+SG+ G+ + ++V+ LM + +G S S + S V +
Sbjct: 179 DDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEA 238
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
+HG ++K G + +F+ S +VDMYAK RG
Sbjct: 239 VHGCVVKAGLDTDLFLASAMVDMYAK-------------------------------RGA 267
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNG------LEREAIDLFREMRLEGLAMDQFTF 177
+ E+ LF+ + D + + + MI GL ++ + REA+ L+ E++ G+ +FTF
Sbjct: 268 LSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEFTF 327
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
SV+ AC +E GKQIH ++++ + + F+GSAL+D+Y ++ FR++
Sbjct: 328 SSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPK 387
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
++VV+WTAM+ G QN E A+ +F + G++PD FT+ SV+++CA+LA + G Q
Sbjct: 388 QDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQM 447
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
+ +G F + N+ + Y + GN+E + + F EM D VSW+A++S +A+ G A
Sbjct: 448 QCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCA 507
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
+ + F +M+ + P+E+T +GVL+ACS GLV++G Y+EIM EYG+ P H TC
Sbjct: 508 RQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLCPTVKHCTC 567
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
++D+L RAGRL +A++FI F + + W +LL SCRIH ++E G+ A+ ++EL P +
Sbjct: 568 VVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSCRIHRDMERGQLVADRIMELQPAS 627
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
YV L ++Y G+ S++R M+E+GV+K+PG SWI+ +S +H F A D S P
Sbjct: 628 SGCYVNLYNMYLDAGELSLGSKIRDLMKERGVKKEPGLSWIELRSGIHSFVAGDKSHPEC 687
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
+ IY +L ++ K I + D S + + +N HSEKLA+A G++ +P P
Sbjct: 688 NAIYTKLAEMLSK-IDKLTTTDTSCIEWVETTGREQNWMNCHSEKLAVALGIIHLPQSAP 746
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
IRV+KNLRVC DCH+ K ISK REI++RD +RFH F++G CSCGD+W
Sbjct: 747 IRVMKNLRVCRDCHSTMKLISKSECREIILRDVIRFHHFRDGSCSCGDYW 796
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 178/362 (49%), Gaps = 13/362 (3%)
Query: 104 PEKNIVMYNTMITGLLRRGL--VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDL 161
P ++ + NT++ R G ++RRL M ++++S+ +I + G E+++
Sbjct: 41 PSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAVSFNLLIDAYSRAGQTEESLET 100
Query: 162 F-REMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYC 220
F R + D+FT+ + L AC L+EGK +HA + + VFV ++LV MY
Sbjct: 101 FLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYA 160
Query: 221 KCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGS 280
+C + A VF ++ VSW +++ GY + G EE +++F M+R + + F LGS
Sbjct: 161 RCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGS 220
Query: 281 VISSCANLASLEEGT--QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
VI C+ G HG + GL + + +++A+V Y K G + ++ LF +
Sbjct: 221 VIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLD 280
Query: 339 RDEVSWTALVSGYAKFGKA------NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLV 392
+ V + A+++G + A E + L+ ++ S G++P E T V+ AC+ AG +
Sbjct: 281 PNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVIRACNLAGDI 340
Query: 393 EKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
E G+ ++K + + + +ID+ + +E+ +P D + W ++S
Sbjct: 341 EFGKQIHGQVLK-HCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVP-KQDVVTWTAMIS 398
Query: 453 SC 454
C
Sbjct: 399 GC 400
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 34/190 (17%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D V+W +ISG + A+ +++ +L GL T S+++ +S V
Sbjct: 385 VPKQDVVTWTAMISGCVQNELFERALALFHELLGVGL-KPDPFTISSVMNACASLAVVRT 443
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+ K GF + +G+ + MYA+ G + A + F E+ ++V
Sbjct: 444 GEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVV----------- 492
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SW+ +I+ Q+G R+A+ F EM + ++ TF V
Sbjct: 493 --------------------SWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGV 532
Query: 181 LTAC--GGLL 188
LTAC GGL+
Sbjct: 533 LTACSHGGLV 542
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M HD VSW+ +IS HA HG A++ +N M+ + + ITF +L S VD
Sbjct: 486 MESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVP-NEITFLGVLTACSHGGLVDE 544
Query: 61 GRQIHGHI-LKFGFGSYVFVGSPLVDMYAKLGLIYDAK 97
G + + + +++G V + +VD+ + G + DA+
Sbjct: 545 GLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRLADAE 582
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/519 (41%), Positives = 320/519 (61%), Gaps = 2/519 (0%)
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
LF M+++D +SW+ MI G ++NG FRE+ G D F+ V+ AC +
Sbjct: 57 LFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMG 116
Query: 190 LEEGKQIHAFIIRND-HKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
L G+ IH+ +++N H DN FV S LVDMY KC I A+ +F M K++V+ T M+
Sbjct: 117 LIMGRLIHSTVLKNGLHLDN-FVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIA 175
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
GY + G E+ +F M+R+G PD + +++++CA L ++ + H
Sbjct: 176 GYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSL 235
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
+ + A++ Y KCG+I+ S +F+ M ++ +SW+A++ Y G+ E ++LF ML
Sbjct: 236 DVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMML 295
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
+ G+ P+ +T I +L ACS AGLV+ G F +M YG+RP HYTCM+D+L RAGRL
Sbjct: 296 NSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRL 355
Query: 429 EEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIY 488
++A I M D W L +CRIH V++ + AA+ LL L NP Y+LLS+IY
Sbjct: 356 DQALRLIENMEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIY 415
Query: 489 ASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLN 548
A+ G+W V+++R M ++ ++K PG +WI+ + ++ F A D S S++IY L+ L+
Sbjct: 416 ANAGRWKDVAKIRNLMAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLS 475
Query: 549 RKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCS 608
+K+ GYVPD +SVLHDV+ K+ +L+ HSEKLAIAFGL+ P G PIR+ KNLRVC
Sbjct: 476 QKLESAGYVPDTNSVLHDVDEEVKLGILHAHSEKLAIAFGLIATPDGTPIRITKNLRVCG 535
Query: 609 DCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
DCH+ K +S ITQR+I+VRDA RFH FK G CSCGD+W
Sbjct: 536 DCHSFCKLVSAITQRDIIVRDANRFHHFKEGICSCGDYW 574
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 179/370 (48%), Gaps = 42/370 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSW+++I G +G + + +++ G FS ++ + R + L
Sbjct: 61 MEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGS---KPDNFSLPFVIKACRDTMGL 117
Query: 61 --GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
GR IH +LK G FV S LVDMYAK G+I +AK+
Sbjct: 118 IMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQ-------------------- 157
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
LF M KD ++ T MI G + G E+ LF +MR +G D+
Sbjct: 158 -----------LFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMV 206
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
+++ AC L A+ + + +H ++ + +V +G+A++DMY KC SI + +F M K
Sbjct: 207 TIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQK 266
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-F 297
NV+SW+AM+ YG +G EA+++F M +GI P+ T S++ +C++ +++G Q F
Sbjct: 267 NVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLF 326
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALVSGYAKFGK 356
S+ G+ + +V G+ G ++ + RL M V +DE W A + +
Sbjct: 327 SLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGA----CR 382
Query: 357 ANETIDLFEK 366
+ +DL EK
Sbjct: 383 IHRQVDLAEK 392
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 152/289 (52%), Gaps = 7/289 (2%)
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
MD F S L C + + KQ+HA + ++ V + L+ M K K + A +
Sbjct: 1 MDPDFFISTLFKCRNIFQI---KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLL 57
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASL 291
F M ++ VSW+ M+ G+ +NG E + F + R G +PD+F+L VI +C + L
Sbjct: 58 FNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGL 117
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
G H L GL V + LV Y KCG I+++ +LF+ M +D V+ T +++GY
Sbjct: 118 IMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGY 177
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE-IMVKEYGIRP 410
A+ GK NE+ LF++M G PD+V ++ +++AC++ G + K R + + + Y +
Sbjct: 178 AECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDV 237
Query: 411 IHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+ T MID+ ++ G ++ ++ ++M + I W+ ++ + HG
Sbjct: 238 --ELGTAMIDMYAKCGSIDSSREIFDRME-QKNVISWSAMIGAYGYHGQ 283
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/631 (36%), Positives = 363/631 (57%), Gaps = 35/631 (5%)
Query: 21 SVNDAVKVYNLMLKDGLGNLSRITFS---TMLIMSSSRRCVDLGRQIHGHILKFGFGSYV 77
S ND+ + + L N S + S +++ SS V IH ++K S
Sbjct: 115 SSNDSTRTKVAVFLGKLHNSSLLADSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDG 174
Query: 78 FVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDK 137
F+G LV MY KLG YD E+++RLF M ++
Sbjct: 175 FIGDRLVSMYFKLG--YD-----------------------------EDAQRLFDEMPNR 203
Query: 138 DSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQFTFGSVLTACGGLLALEEGKQI 196
D +SW ++++GL G ++ F MR E G ++ T SV++AC + AL+EGK +
Sbjct: 204 DLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSL 263
Query: 197 HAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCS 256
H +++ V ++L++MY K + A +F M +++VSW +M+V + NG +
Sbjct: 264 HGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYA 323
Query: 257 EEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNAL 316
E+ + +F M+R GI PD T+ +++ +C + + H G + I ++ AL
Sbjct: 324 EKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATAL 383
Query: 317 VTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDE 376
+ Y K G + S +F E+ RD ++WTA+++GYA E I LF+ M+ G++ D
Sbjct: 384 LNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDH 443
Query: 377 VTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFIN 436
VT +LSACS +GLVE+G+ YFEIM + Y + P DHY+CM+D+L R+GRLE+A I
Sbjct: 444 VTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIK 503
Query: 437 KMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDH 496
MP P + W LL +CR++GNVE+GK AE LL LDP + +Y++LS+IY++ G W
Sbjct: 504 SMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRX 563
Query: 497 VSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGY 556
S++R M+E+ + ++PGCS+I++ +++H F D P SD+I+ +LE+L RK+ + G
Sbjct: 564 ASKVRXLMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIXEAGC 623
Query: 557 VPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKY 616
P VLHD++ K+ M+N HSEKLAIAFGLL G+P+ + KNLR+C DCH+ K+
Sbjct: 624 APKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKF 683
Query: 617 ISKITQREILVRDAVRFHLFKNGECSCGDFW 647
S + +R I++RD+ RFH F +G CSC D+W
Sbjct: 684 ASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 714
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 184/394 (46%), Gaps = 36/394 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN L+SG + G + + + M + + +T +++ + +D
Sbjct: 200 MPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDE 259
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +HG ++K G V + L++MY KLG +
Sbjct: 260 GKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFL--------------------------- 292
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ + +LF M + +SW +M+ NG + +DLF M+ G+ DQ T ++
Sbjct: 293 ----DAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVAL 348
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC + + IHA+I R ++ + +AL+++Y K + +E +F + ++
Sbjct: 349 LRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDT 408
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
++WTAML GY + C EA+K+F M + G+E D T ++S+C++ +EEG + F
Sbjct: 409 IAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEI 468
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKAN 358
S V + + + +V G+ G +ED++ L M + W AL+ +G
Sbjct: 469 MSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVE 528
Query: 359 ETIDLFEKMLSHGLKP-DEVTLIGVLSACSRAGL 391
++ E++LS L P D I + + S AGL
Sbjct: 529 LGKEVAEQLLS--LDPSDHRNYIMLSNIYSAAGL 560
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/649 (36%), Positives = 372/649 (57%), Gaps = 38/649 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+WN +++ A +G +A+ + M +G G +++T+ ++L ++ + GR+I
Sbjct: 325 DVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGA-NKVTYLSVLEACANLEALSQGREI 383
Query: 65 HGHILKFGF-GSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
H +L G V VG+ ++ MY K G A F+ +P K+ V +N +I +
Sbjct: 384 HARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASV---- 439
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
N ++A++LF M LEGL ++FT S+L A
Sbjct: 440 ---------------------------GNSKFQDALELFHGMELEGLRSNEFTLLSLLEA 472
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDN-VFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
CGGL L+ +QIHA N VG+++V+MY +C S+ A+ F ++ K +V+
Sbjct: 473 CGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVA 532
Query: 243 WTAMLVGYGQ--NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
W+ +L Y Q +G A K F M+ GI+P + T S + +CA +A+LE G H R
Sbjct: 533 WSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRR 592
Query: 301 SLVTGLI-SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ +G + + + + N ++ YGKCG+ D+ +F++M + +SW +L+ YA G A E
Sbjct: 593 AAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALE 652
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ ++ML G PD T + +L S AGL+E+G +F ++++G+ P C++
Sbjct: 653 ALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLV 712
Query: 420 DILSRAGRLEEAKSFINKMPF-PPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
D+L+R G L+ A+ I P D I W TLL++C+ +G+ + G AE + EL+P +
Sbjct: 713 DLLARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQHS 772
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
S+V+L+++YAS G+W S++R+ M V+K+PGCSWI+ VH F + + P
Sbjct: 773 GSFVVLANLYASVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVHEFISGESKHPKIR 832
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
+I +LEKL +M + GYVPD ++V+HDVE +K ++L+ HSE+LAI FGL+ PG I
Sbjct: 833 EICEDLEKLTLRMREAGYVPDTTNVVHDVEEGDKEEILSRHSERLAIVFGLMSTRPGETI 892
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RVVKNLRVCSDCH ATK IS + REI+VRD+ RFH FK+G+CSCGDFW
Sbjct: 893 RVVKNLRVCSDCHAATKIISSVVGREIVVRDSSRFHHFKHGQCSCGDFW 941
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 111/348 (31%), Positives = 184/348 (52%), Gaps = 6/348 (1%)
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
V ++ +F G+ K+ SWT M+ QNG REA++LF M+ EG D+ F L A
Sbjct: 8 VTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVVFVIALDA 67
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C L+ G+QIH+ ++ + N+ + ++LV+MY KC+ + AE VF M ++VVSW
Sbjct: 68 CAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSW 127
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
TAML Y QNGC +A++ M G++P+ T +++ CA L L+ G + H R +
Sbjct: 128 TAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIIN 187
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
GL + NALV YG CG+ +D +F+ M + WT +++G ++ G+ E + +
Sbjct: 188 EGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLV 247
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F KM G+K +EVT + ++ C V++G + + E T +I +
Sbjct: 248 FRKMDLEGVKANEVTYMSMVEVCRNLDAVKEG-EMIDARILESPFCSSTLLATSLISLYG 306
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL 471
+ G L+ AK + M + D + W ++++C +G+ W A LL
Sbjct: 307 QCGILDRAKGLLEHM-YQRDVVAWNAMVTACAQNGD----NWEAIHLL 349
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/495 (26%), Positives = 232/495 (46%), Gaps = 48/495 (9%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
SW ++++ ++ +G +A++++ M +G ++ F L ++ +D GRQIH
Sbjct: 25 SWTMMMAAYSQNGHYREALELFTRMQWEGT-RPDKVVFVIALDACAASGELDHGRQIHSS 83
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
++ G S + + + LV+MY K + A++ FD
Sbjct: 84 VVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFD-------------------------- 117
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
GM +D +SWT M+ QNG +A++ M EG+ +Q TF +++ C L
Sbjct: 118 -----GMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKL 172
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
L+ G++IH II + + +G+ALV MY C S +SVF M +V+ WT M+
Sbjct: 173 RLLDLGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMI 232
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
G QNG EE + +F M G++ ++ T S++ C NL +++EG R L +
Sbjct: 233 AGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFC 292
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
S ++ +L++ YG+CG ++ + L M RD V+W A+V+ A+ G E I L +M
Sbjct: 293 SSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRM 352
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRH-YFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
G ++VT + VL AC+ + +GR + +++ R + + +I + + G
Sbjct: 353 DMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNS-VITMYGKCG 411
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL------ELDPYNPAS 480
+ E A S MP D + W ++ N +G + L EL+
Sbjct: 412 QTEAAMSVFEAMPRKDD-VSWNAVI-------NASVGNSKFQDALELFHGMELEGLRSNE 463
Query: 481 YVLLSSIYASKGKWD 495
+ LLS + A G D
Sbjct: 464 FTLLSLLEACGGLED 478
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 135/246 (54%), Gaps = 2/246 (0%)
Query: 218 MYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFT 277
MY KC + A VF ++ KNV SWT M+ Y QNG EA+++F MQ G PD
Sbjct: 1 MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60
Query: 278 LGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN 337
+ +CA L+ G Q H + +GL S I +SN+LV YGKC ++ + ++F+ M
Sbjct: 61 FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120
Query: 338 VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH 397
+RD VSWTA+++ YA+ G ++ ++ +M + G+KP++VT + ++ C++ L++ GR
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180
Query: 398 YFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIH 457
++ E G+ P ++ + G ++ KS ++M + W T+++ C +
Sbjct: 181 IHHRIINE-GLEPDGILGNALVHMYGSCGSFDDMKSVFSRMG-QSSVLLWTTMIAGCSQN 238
Query: 458 GNVEIG 463
G E G
Sbjct: 239 GQYEEG 244
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 172/382 (45%), Gaps = 43/382 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN +I+ + DA+++++ M +GL + + T ++L + L
Sbjct: 423 MPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRS-NEFTLLSLLEACGGLEDLKL 481
Query: 61 GRQIHGHILKFGFG-SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
RQIH GFG + VG+ +V+MYA+ G + DAK+ FD L EK +V
Sbjct: 482 ARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLV---------- 531
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQ--NGLEREAIDLFREMRLEGLAMDQFTF 177
+W+ ++ Q +G R A F+EM EG+ + TF
Sbjct: 532 ---------------------AWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTF 570
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFV-GSALVDMYCKCKSIKYAESVFRTMA 236
S L AC + LE G+ +H + + V G+ +++MY KC S A+ VF M
Sbjct: 571 VSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMP 630
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
K ++SW +++V Y NG + EA+ M G +PD T S++ ++ LE G +
Sbjct: 631 EKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVE 690
Query: 297 FHGRSLVT--GLISFITVSNALVTFYGKCGNIEDSHRLF--NEMNVRDEVSWTALVSGYA 352
H RS + GL LV + G ++ + L + D ++W L++
Sbjct: 691 -HFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLAACK 749
Query: 353 KFGKANETIDLFEKMLSHGLKP 374
+G I E++ L+P
Sbjct: 750 SYGDPQRGIRCAERVFE--LEP 769
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/625 (36%), Positives = 357/625 (57%), Gaps = 33/625 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V++N LI+G+ G +A+ ++ M + G S TFS +L LG+Q+
Sbjct: 208 DSVTFNTLITGYEKDGLYTEAIHLFLKMRQSG-HKPSDFTFSGVLKAVVGLHDFALGQQL 266
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG + GF VG+ ++ Y+K V
Sbjct: 267 HGLSVTTGFSRDASVGNQILHFYSK-------------------------------HDRV 295
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
E+R LF M + D +S+ +I+ Q E+++LFREM+ G F F ++L+
Sbjct: 296 LETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIA 355
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L +L+ G+Q+H I + VG++LVDMY KC+ AE +F++++ ++ VSWT
Sbjct: 356 ANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWT 415
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
A++ GY Q G +K+F M+ + D T +V+ + A ASL G Q H + +
Sbjct: 416 ALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRS 475
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G + + + LV Y KCG+I+D+ ++F EM R+ VSW AL+S YA G I F
Sbjct: 476 GNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAF 535
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
KM+ GL+PD V+++GVL ACS G VE+G +F+ M YGI P HY CM+D+L R
Sbjct: 536 TKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGR 595
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY-NPASYVL 483
GR EA+ +++MPF PD I W+++L++CRI+ N + + AAE L ++ + A+YV
Sbjct: 596 NGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVS 655
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
+S+IYA+ GKW++V +++ MRE+G++K P SW++ ++H+FS++D + P D+I +
Sbjct: 656 MSNIYAAAGKWENVRHVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVKK 715
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
+ +L ++ +EGY PD SSV+ D++ KI+ L +HSE+LA+AF L+ P G PI V+KN
Sbjct: 716 INELTTEIEREGYKPDTSSVVQDIDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKN 775
Query: 604 LRVCSDCHNATKYISKITQREILVR 628
LR C DCH A K ISKI +R I +
Sbjct: 776 LRACRDCHAAIKLISKIVKRVITTQ 800
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 222/472 (47%), Gaps = 32/472 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP V+W +L+ +A + ++A K++ M + +TF+T+L + +
Sbjct: 101 MPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRS-CTLPDYVTFTTLLPGCNDAVPQNA 159
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
Q+H +K GF + +F + + N ++
Sbjct: 160 VGQVHAFAVKLGFDTNLF-----------------------------LTVCNVLLKSYCE 190
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
++ + LF + DKDS+++ T+ITG ++GL EAI LF +MR G FTF V
Sbjct: 191 VRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGV 250
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A GL G+Q+H + + VG+ ++ Y K + ++F M +
Sbjct: 251 LKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDF 310
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VS+ ++ Y Q EE++ +F MQ G + +F +++S ANL+SL+ G Q H +
Sbjct: 311 VSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQ 370
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++V S + V N+LV Y KC +++ +F ++ R VSWTAL+SGY + G
Sbjct: 371 AIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAG 430
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LF KM L+ D+ T VL A + + G+ +++ + + + ++D
Sbjct: 431 LKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSG-SGLVD 489
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLE 472
+ ++ G +++A +MP +A+ W L+S+ +G+ E A +++
Sbjct: 490 MYAKCGSIKDAVQVFEEMP-DRNAVSWNALISAYADNGDGEAAIGAFTKMIQ 540
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 198/410 (48%), Gaps = 8/410 (1%)
Query: 47 TMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEK 106
T+ + R+ R++ I+K GF + + V+ + G + A + +DE+P K
Sbjct: 14 TLATLRQLRQPPPATRRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHK 73
Query: 107 NIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR 166
N V NTMI+G ++ G + +R LF M D+ ++WT ++ N EA LFR+M
Sbjct: 74 NTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMC 133
Query: 167 LEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVF--VGSALVDMYCKCKS 224
D TF ++L C + Q+HAF ++ N+F V + L+ YC+ +
Sbjct: 134 RSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRR 193
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A +F + K+ V++ ++ GY ++G EA+ +F M+++G +P DFT V+ +
Sbjct: 194 LDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKA 253
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
L G Q HG S+ TG +V N ++ FY K + ++ LFNEM D VS+
Sbjct: 254 VVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSY 313
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR--HYFEIM 402
++S Y++ + E+++LF +M G +LS + ++ GR H I+
Sbjct: 314 NVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIV 373
Query: 403 VKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
I + + ++D+ ++ +EA+ I K + W L+S
Sbjct: 374 ATADSILHVGN---SLVDMYAKCEMFDEAE-LIFKSLSQRSTVSWTALIS 419
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 77/157 (49%), Gaps = 19/157 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSWN LIS +A +G A+ + M++ GL S ++ +LI S V+
Sbjct: 507 MPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDS-VSILGVLIACSHCGFVEQ 565
Query: 61 GRQIHGHILKFGFGSYVFVGSP-------LVDMYAKLGLIYDAKRGFDELP-EKNIVMYN 112
G + F S ++ +P ++D+ + G +A++ DE+P E + +M++
Sbjct: 566 GTEF------FQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWS 619
Query: 113 TMITGLL---RRGLVEE-SRRLFRGMKDKDSISWTTM 145
+++ + L E + +LF K +D+ ++ +M
Sbjct: 620 SVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSM 656
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 247/680 (36%), Positives = 371/680 (54%), Gaps = 63/680 (9%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN++I + S + A +Y ML + LG T+ ++ S RR +Q+H H+
Sbjct: 46 WNMMIRAYIQTNSPHFAFTLYKSMLSNYLGA-DNYTYPLLIQACSIRRSEWEAKQVHNHV 104
Query: 69 LKFGFGSYVFVGSPLVDM-------------------------------YAKLGLIYDAK 97
LK GF S V+V + L++ Y ++G + +AK
Sbjct: 105 LKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAK 164
Query: 98 RGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLERE 157
+ ++PE++I+ N+MI RGLV E+ +LF M +KD ++W+ +I QN + E
Sbjct: 165 HIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEE 224
Query: 158 AIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVD 217
AI F M G+ +D+ S L+AC LL + GK IH+ ++ + + + +AL+
Sbjct: 225 AIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIY 284
Query: 218 MYCKCKSIKYA-------------------------------ESVFRTMAWKNVVSWTAM 246
MY KC I A +++F +M K+VVSW++M
Sbjct: 285 MYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSM 344
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ GY QN +E + +F MQ +G +PD+ TL SVIS+CA LA+LE+G H GL
Sbjct: 345 ISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGL 404
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ + L+ Y KCG +E + +F M + +W AL+ G A G ++D+F
Sbjct: 405 TINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSN 464
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M + P+E+T +GVL AC GLV++G+H+F M+ ++ I+P HY CM+D+L RAG
Sbjct: 465 MKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAG 524
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+L+EA+ +N+MP PD W LL +C+ HG+ E+G+ L+EL P + +VLLS+
Sbjct: 525 KLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSN 584
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IYASKGKWD V ++R M + V K PGCS I+ +H F A D + P D I L +
Sbjct: 585 IYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVE 644
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
+ K+ EGY PD++ VL DV+ EK L HSEKLAIAFGL+ I P PIR++KNLR+
Sbjct: 645 MAMKLKLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRI 704
Query: 607 CSDCHNATKYISKITQREIL 626
C+DCH A K ISK R+I+
Sbjct: 705 CNDCHTAAKLISKAFCRKIV 724
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 212/374 (56%), Gaps = 7/374 (1%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+W+ LI+ + +A++ + M K G+ + + + L ++ V++G+ I
Sbjct: 205 DMVTWSALIACFQQNEMYEEAIRTFVGMHKIGV-MVDEVVAVSALSACANLLVVNMGKLI 263
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H LK G SY+ + + L+ MY+K G I A++ FDE +++ +N+MI+G L+ LV
Sbjct: 264 HSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLV 323
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ ++ +F M +KD +SW++MI+G QN L E + LF+EM++ G D+ T SV++AC
Sbjct: 324 DNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISAC 383
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L ALE+GK +HA+I RN NV +G+ L+DMY KC ++ A VF M K + +W
Sbjct: 384 ARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWN 443
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
A+++G NG E ++ +F NM++ + P++ T V+ +C ++ ++EG Q H S++
Sbjct: 444 ALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEG-QHHFYSMIH 502
Query: 305 G--LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV-SWTALVSGYAKFGKANETI 361
+ + +V G+ G ++++ L N M + +V +W AL+ K G +
Sbjct: 503 DHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGR 562
Query: 362 DLFEKMLSHGLKPD 375
+ K++ L+PD
Sbjct: 563 RVGRKLIE--LQPD 574
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 181/415 (43%), Gaps = 46/415 (11%)
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
++ +RR+F +++ + W MI +Q A L++ M L D +T+ ++ A
Sbjct: 28 IDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQA 87
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C + E KQ+H +++ +V+V + L++ + C ++ A VF + + VSW
Sbjct: 88 CSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSW 147
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
++L GY + G EEA I+ M P+ RS++
Sbjct: 148 NSILAGYIEIGNVEEAKHIYHQM------PE-------------------------RSII 176
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
SN+++ +G G + ++ +LF+EM +D V+W+AL++ + + E I
Sbjct: 177 A--------SNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRT 228
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F M G+ DEV + LSAC+ +V G+ + +K G + +I + S
Sbjct: 229 FVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLK-IGTESYINLQNALIYMYS 287
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
+ G + A+ ++ + D I W +++S V+ K +S+ E D + +S +
Sbjct: 288 KCGDIMVARKLFDE-AYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMI- 345
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPG--CSWIKYKSRVHIFSADDWSSPY 536
S YA +D L + M+ G + D S I +R+ W Y
Sbjct: 346 --SGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAY 398
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 118/260 (45%), Gaps = 36/260 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSW+ +ISG+A + ++ + ++ M G T +++ + ++
Sbjct: 333 MPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKP-DETTLVSVISACARLAALEQ 391
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +H +I + G V +G+ L+DMY K G + A F + EK I +N +I GL
Sbjct: 392 GKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAM 451
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GLVE S +D+F M+ + ++ TF V
Sbjct: 452 NGLVESS-------------------------------LDMFSNMKKCHVTPNEITFMGV 480
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHK--DNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
L AC + ++EG+ H + + +DHK NV +VD+ + ++ AE + M
Sbjct: 481 LGACRHMGLVDEGQH-HFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMT 539
Query: 239 -NVVSWTAMLVGYGQNGCSE 257
+V +W A+L ++G SE
Sbjct: 540 PDVATWGALLGACKKHGDSE 559
>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
Length = 923
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 245/654 (37%), Positives = 375/654 (57%), Gaps = 46/654 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNL-SRITFSTMLIMSSSRRCVDLGRQ 63
D VSWN +++ +A +G + A K + ML +G L SRIT+ +L C
Sbjct: 305 DVVSWNAMLTANACNGFHDKAFKCFREMLL--VGELPSRITYVAIL-----NACFLAAHL 357
Query: 64 IHGHILKF-------GFGSY-VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
HG +K G S V +G+ +++MY++ K F
Sbjct: 358 KHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSR---CKSPKSAFS-------------- 400
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSIS-WTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
S L +D+ SI W T+++ ++N EA +FR M L G+ +D
Sbjct: 401 -----------SSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDT 449
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
+ +V ACG +LE+GK IH+ + ++ V +ALV MY + S++ A +F
Sbjct: 450 VSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDA 509
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
M +NV+SWTAM+ + Q G + EA++IF ++ G+ P++ T +V+++C NLAS+
Sbjct: 510 MTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAA 569
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
TG + V+N L+ GKCG++E+ F M V+++VSW ++ A+
Sbjct: 570 KLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQH 629
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G ++LF+ M G+ VTLIGVLS+CS AGLV +G YF M +YG +H
Sbjct: 630 GNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAEH 689
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAI-GWATLLSSCRIHGNVEIGKWAAESLLEL 473
Y+C+ID+LSRAG LE A+ F+ ++PF ++ W TLL C++HG++E G A + +L L
Sbjct: 690 YSCVIDLLSRAGWLEHAEEFVKRLPFGDQSVFPWITLLCGCKLHGDLERGGRATQRILGL 749
Query: 474 DPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWS 533
+P + Y+++ ++YA GKW + +R++M E G +K+PG SWI+ K R+H F D S
Sbjct: 750 NPGSTGPYLVMHNLYAGAGKWPEAAAVRKSMVELGPKKEPGLSWIEVKGRIHEFRVGDTS 809
Query: 534 SPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIP 593
P S +I+ ELE+LN +M + G+V D+ +V++D++ EK +L HSEKLAIAFGL+
Sbjct: 810 HPRSSEIHRELERLNEEMKRAGFVCDIKAVVYDLQAKEKESLLCQHSEKLAIAFGLISTA 869
Query: 594 PGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G P+R++KNLRVCSDCH+ATK+IS + REI+VRDA RFH F+ G CSC DFW
Sbjct: 870 AGEPLRIMKNLRVCSDCHSATKFISGLVGREIVVRDAYRFHHFRGGACSCEDFW 923
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 173/359 (48%), Gaps = 35/359 (9%)
Query: 38 GNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAK 97
G+ TF+ ++ + + GR+IHG IL+ G F+G+ L+ MY K G
Sbjct: 36 GSADASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGS----- 90
Query: 98 RGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLERE 157
EE+R +F+G++DK ++WT++I ++G +E
Sbjct: 91 --------------------------PEEARAVFQGIQDKSVVAWTSLIGVNARSGHPKE 124
Query: 158 AIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKD-NVFVGSALV 216
A LFREM+L+G+ + T+ +VL ACG ++ I A + + +V V +A++
Sbjct: 125 AFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVD---TIRARVEACGSLELDVIVATAVM 181
Query: 217 DMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDF 276
+ Y KC + A VF + ++ W AM+ + +EA+++F M+ G+ P+
Sbjct: 182 NAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVAHEQGDEALELFRQMRLGGVTPNKG 241
Query: 277 TLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
T + +++C + E + H + + V ALV YGK G ++D+ +F +
Sbjct: 242 TCVAALNACCHSRDFSEALRIHAFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFERI 301
Query: 337 NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG 395
RD VSW A+++ A G ++ F +ML G P +T + +L+AC A ++ G
Sbjct: 302 QERDVVSWNAMLTANACNGFHDKAFKCFREMLLVGELPSRITYVAILNACFLAAHLKHG 360
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 154/292 (52%), Gaps = 16/292 (5%)
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
D TF +++ C L L +G++IH I+RN + F+G+ L+ MYCKC S + A +VF
Sbjct: 39 DASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVF 98
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
+ + K+VV+WT+++ ++G +EA +F MQ G+ P+D T +V+ +C + ++
Sbjct: 99 QGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVD 158
Query: 293 EGTQFHGRSLVTGLISF-ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
R G + + V+ A++ YGKCG+++ + +F+ + VRD W A++S
Sbjct: 159 ---TIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLL 215
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
+ +E ++LF +M G+ P++ T + L+AC + R + E + R +
Sbjct: 216 VAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHS------RDFSEALRIHAFAREL 269
Query: 412 HDH-----YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
T ++++ + G++++A+ ++ D + W +L++ +G
Sbjct: 270 AGDADTVVQTALVNMYGKFGKVDDAEEIFERIQ-ERDVVSWNAMLTANACNG 320
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 173/358 (48%), Gaps = 17/358 (4%)
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
E ++++ ++ + G ++ + +F G+ +D+ W MI+ L+ + EA++LFR+
Sbjct: 171 ELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVAHEQGDEALELFRQ 230
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
MRL G+ ++ T + L AC E +IHAF + V +ALV+MY K
Sbjct: 231 MRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTVVQTALVNMYGKFGK 290
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ AE +F + ++VVSW AML NG ++A K F M G P T +++++
Sbjct: 291 VDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLVGELPSRITYVAILNA 350
Query: 285 CANLASLEEGTQFHGRSLVTGLISF----ITVSNALVTFYGKCGNIED--SHRLFNEMNV 338
C A L+ G F V G + + A++ Y +C + + S L E +
Sbjct: 351 CFLAAHLKHG-DFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCKSPKSAFSSSLLLEQD- 408
Query: 339 RDEVS---WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG 395
RD+ S W ++S Y + + E +F ML G+ D V+L+ V +AC + +EKG
Sbjct: 409 RDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLMTVFNACGSSASLEKG 468
Query: 396 RHYFEIMVKEYGIR--PIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
+ ++ + R P+ + ++ + +R G LE+A+ + M + I W ++
Sbjct: 469 KWIHSLLTESELTRKTPVQN---ALVTMYARLGSLEDAREIFDAMT-TRNVISWTAMV 522
>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
Length = 795
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/644 (36%), Positives = 364/644 (56%), Gaps = 37/644 (5%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
SW ++I+ +A +G + +++ + M + G+ TF+T+L ++ ++ + +H
Sbjct: 185 SWTIIIAAYAQNGHCMEVLRLLSRMNQAGV-KPDGYTFTTVLGACTAVGALEEAKILHAA 243
Query: 68 -ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
I G VG+ L+++Y K G + EE
Sbjct: 244 TISSTGLDRDAAVGTALINLYGKCGAL-------------------------------EE 272
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+ +F + +KD +SW++MI Q+G + AI L M LEG+ + TF +VL A
Sbjct: 273 AFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTS 332
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L A + GK+IHA I++ + D+V + SALV MYC ++ A S+F + ++VVSW++M
Sbjct: 333 LKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSM 392
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ GY QN A+ +F M+ +G++P+ T S I +CA + +L GTQ H R GL
Sbjct: 393 IAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGL 452
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ V+ ALV YGKCG +E++ +F M ++ ++WT++ Y + G + ++ L
Sbjct: 453 DKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHG 512
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M G+KPD + + +L +C+ AG + KG HY+ +M +++GI P +H CM+DIL RAG
Sbjct: 513 MELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAG 572
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+LE A+ IN M F ++ W LL++C+ H + AAE + +L+P N YVLLSS
Sbjct: 573 KLEAAEQLINTMKF-ESSLAWMMLLTACKAHNDTARAARAAEKIFQLEPKNATPYVLLSS 631
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS--DQIYAEL 544
++ + G W+ + RR M +GV++ G S I+ RVH F A P+ +I+A L
Sbjct: 632 VFCAAGSWEAAEETRRRMDGRGVQRLLGRSSIEIGDRVHEFVAASDVLPHHLVGEIFAAL 691
Query: 545 EKLNRKMIKEGYVPDMSSV-LHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
EKL R+M GYVPD ++V L DVE K + +HSE LA+ G++ P G P+R+ KN
Sbjct: 692 EKLGREMQGAGYVPDATAVRLRDVEEGGKENAVPYHSEMLALGLGIISTPAGTPLRITKN 751
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LR+CSDCH ATK++SK+ R I VRD R H F+NG CSCGD+W
Sbjct: 752 LRMCSDCHIATKFVSKLVHRRISVRDGRRHHHFENGVCSCGDYW 795
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/435 (28%), Positives = 226/435 (51%), Gaps = 35/435 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSR-RCVD 59
M + V+W LIS G DA+ ++ ML G+ + RITF+++L+ S R R +D
Sbjct: 76 MKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGV-SPDRITFTSILLKWSGRERNLD 134
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G+++H HI++ G+ V + +V+MY K G
Sbjct: 135 EGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGD--------------------------- 167
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
VE++ +F ++D + SWT +I QNG E + L M G+ D +TF +
Sbjct: 168 ----VEQAGNVFDSIQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTT 223
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
VL AC + ALEE K +HA I + D + VG+AL+++Y KC +++ A VF + K
Sbjct: 224 VLGACTAVGALEEAKILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNK 283
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
++VSW++M+ + Q+G ++ A+++ M G+ P++ T +V+ + +L + + G + H
Sbjct: 284 DIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIH 343
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
R + G + +++ALV Y G +E + +F RD VSW+++++GY++
Sbjct: 344 ARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPA 403
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
+ LF +M G++P+ VT + + AC+ G + +G E V+ G+ T +
Sbjct: 404 RALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHE-RVRCLGLDKDVPVATAL 462
Query: 419 IDILSRAGRLEEAKS 433
+++ + GRLEEA++
Sbjct: 463 VNLYGKCGRLEEAEA 477
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/428 (29%), Positives = 226/428 (52%), Gaps = 32/428 (7%)
Query: 101 DELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAID 160
DE P++++ + N +I LR G + + +F MKD++ ++WT++I+ G +A+
Sbjct: 44 DERPDESL-LENIVIQMYLRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMV 102
Query: 161 LFREMRLEGLAMDQFTFGSVLTACGGL-LALEEGKQIHAFIIRNDHKDNVFVGSALVDMY 219
LFR+M L G++ D+ TF S+L G L+EGK++H+ I++ ++ + V + +V+MY
Sbjct: 103 LFRKMLLSGVSPDRITFTSILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMY 162
Query: 220 CKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLG 279
KC ++ A +VF ++ NV SWT ++ Y QNG E +++ M + G++PD +T
Sbjct: 163 GKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFT 222
Query: 280 SVISSCANLASLEEGTQFHGRSL-VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
+V+ +C + +LEE H ++ TGL V AL+ YGKCG +E++ +F +++
Sbjct: 223 TVLGACTAVGALEEAKILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDN 282
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
+D VSW+++++ +A+ G+A I L M G++P+ VT + VL A + + G
Sbjct: 283 KDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYG--- 339
Query: 399 FEIMVKEYGIRPIHDHYT---CMIDILSRA----GRLEEAKSFINKMPFPPDAIGWATLL 451
KE R + Y+ C+ L + G +E A+S I + D + W++++
Sbjct: 340 -----KEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARS-IFESSRERDVVSWSSMI 393
Query: 452 SSCRIHGNVEIGKWAAESL-----LELDPYNPASYVLLSSIYASK--GKWDHVSQLRRTM 504
+ + A +L +E+D P S +S+I A G +QL +
Sbjct: 394 A------GYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERV 447
Query: 505 REKGVRKD 512
R G+ KD
Sbjct: 448 RCLGLDKD 455
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 145/282 (51%), Gaps = 7/282 (2%)
Query: 178 GSVLTACGGLLALEEGKQIHAFIIR-----NDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
++LTAC L AL EGK++H ++R ++ D + + ++ MY +C A VF
Sbjct: 14 AAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVF 73
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA-SL 291
M +NVV+WT+++ + G +A+ +F M +G+ PD T S++ + +L
Sbjct: 74 DRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNL 133
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
+EG + H + TG V N +V YGKCG++E + +F+ + + SWT +++ Y
Sbjct: 134 DEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAY 193
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
A+ G E + L +M G+KPD T VL AC+ G +E+ + + G+
Sbjct: 194 AQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRD 253
Query: 412 HDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
T +I++ + G LEEA ++ D + W++++++
Sbjct: 254 AAVGTALINLYGKCGALEEAFGVFVQID-NKDIVSWSSMIAA 294
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 148/368 (40%), Gaps = 86/368 (23%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW+ +I+ A G A+++ LM +G+ + +TF +L +S + G++I
Sbjct: 284 DIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGV-RPNNVTFVNVLEAVTSLKAFQYGKEI 342
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGL------IYDAKRGFD--------------ELP 104
H I++ G+ V + S LV MY G I+++ R D E P
Sbjct: 343 HARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESP 402
Query: 105 EKNIVMYNTM---------IT-----------GLLRRGL--------------------- 123
+ + ++ M +T G LRRG
Sbjct: 403 ARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATAL 462
Query: 124 ---------VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
+EE+ +F GMK K+ ++WT++ QNG ++ L M L+G+ D
Sbjct: 463 VNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDG 522
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRN-DHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
F ++L +C + +G + + ++ V +VD+ + ++ AE +
Sbjct: 523 IVFVAILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLIN 582
Query: 234 TMAWKNVVSWTAMLVGYGQNG----CSEEAVKIFCNMQRNGIEPDDFT----LGSVISSC 285
TM +++ ++W +L + + A KIF +EP + T L SV +
Sbjct: 583 TMKFESSLAWMMLLTACKAHNDTARAARAAEKIF------QLEPKNATPYVLLSSVFCAA 636
Query: 286 ANLASLEE 293
+ + EE
Sbjct: 637 GSWEAAEE 644
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 100/202 (49%), Gaps = 12/202 (5%)
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS-----FITVSNALVTFY 320
M+ I+ + +++++C++L +L EG + HG + L+ + N ++ Y
Sbjct: 1 MEAREIQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMY 60
Query: 321 GKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLI 380
+CG + + +F+ M ++ V+WT+L+S + G + + LF KML G+ PD +T
Sbjct: 61 LRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFT 120
Query: 381 GVLSACS--RAGLVEKGRHYFEIMVKEY-GIRPIHDHYTCMIDILSRAGRLEEAKSFINK 437
+L S L E R + IM Y G R + + ++++ + G +E+A + +
Sbjct: 121 SILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMN---LVVEMYGKCGDVEQAGNVFDS 177
Query: 438 MPFPPDAIGWATLLSSCRIHGN 459
+ P+ W ++++ +G+
Sbjct: 178 IQ-DPNVFSWTIIIAAYAQNGH 198
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/602 (37%), Positives = 352/602 (58%), Gaps = 32/602 (5%)
Query: 47 TMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEK 106
+++ SS V IH ++K S F+G LV MY KLG YD
Sbjct: 67 SLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLG--YD----------- 113
Query: 107 NIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR 166
E+++RLF M +KD +SW ++++GL G ++ F MR
Sbjct: 114 ------------------EDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMR 155
Query: 167 LE-GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI 225
E G ++ T SV++AC + AL+EGK +H +++ V ++L++MY K +
Sbjct: 156 TESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFL 215
Query: 226 KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
A +F M +++VSW +M+V + NG +E+ + +F M+R GI PD T+ +++ +C
Sbjct: 216 DAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRAC 275
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
+ + H G + I ++ AL+ Y K G + S +F E+ RD ++WT
Sbjct: 276 TDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWT 335
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE 405
A+++GYA E I LF+ M+ G++ D VT +LSACS +GLVE+G+ YFEIM +
Sbjct: 336 AMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEV 395
Query: 406 YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKW 465
Y + P DHY+CM+D+L R+GRLE+A I MP P + W LL +CR++GNVE+GK
Sbjct: 396 YRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKE 455
Query: 466 AAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVH 525
AE LL LDP + +Y++LS+IY++ G W S++R M+E+ + ++PGCS+I++ +++H
Sbjct: 456 VAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIH 515
Query: 526 IFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAI 585
F D P SD+I+ +LE+L RK+ + G P VLHD++ K+ M+N HSEKLAI
Sbjct: 516 RFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAI 575
Query: 586 AFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGD 645
AFGLL G+P+ + KNLR+C DCH+ K+ S + +R I++RD+ RFH F +G CSC D
Sbjct: 576 AFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRD 635
Query: 646 FW 647
+W
Sbjct: 636 YW 637
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 184/394 (46%), Gaps = 36/394 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN L+SG + G + + + M + + +T +++ + +D
Sbjct: 123 MPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDE 182
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +HG ++K G V + L++MY KLG +
Sbjct: 183 GKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFL--------------------------- 215
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ + +LF M + +SW +M+ NG + +DLF M+ G+ DQ T ++
Sbjct: 216 ----DAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVAL 271
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC + + IHA+I R ++ + +AL+++Y K + +E +F + ++
Sbjct: 272 LRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDR 331
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
++WTAML GY + C EA+K+F M + G+E D T ++S+C++ +EEG + F
Sbjct: 332 IAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEI 391
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKAN 358
S V + + + +V G+ G +ED++ L M + W AL+ +G
Sbjct: 392 MSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVE 451
Query: 359 ETIDLFEKMLSHGLKP-DEVTLIGVLSACSRAGL 391
++ E++LS L P D I + + S AGL
Sbjct: 452 LGKEVAEQLLS--LDPSDHRNYIMLSNIYSAAGL 483
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/525 (42%), Positives = 319/525 (60%), Gaps = 1/525 (0%)
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
++ + R+F + D + + TM G + AI L ++ GL D +TF S+L A
Sbjct: 85 MDHAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKA 144
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C L ALEEGKQ+H ++ DN++V L++MY C + A VF + VV++
Sbjct: 145 CARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAY 204
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
A++ +N EA+ +F +Q +G++P D T+ +SSCA L +L+ G H
Sbjct: 205 NAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKK 264
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
G ++ V+ AL+ Y KCG+++D+ +F +M RD +W+A++ YA G ++ I +
Sbjct: 265 NGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISM 324
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
+M ++PDE+T +G+L ACS GLVE+G YF M EYGI P HY CMID+L
Sbjct: 325 LREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLG 384
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
RAGRLEEA FI+++P P I W TLLSSC HGNVE+ K + + ELD + YV+
Sbjct: 385 RAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQRIFELDDSHGGDYVI 444
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LS++ A G+WD V+ LR+ M +KG K PGCS I+ + VH F + D S ++
Sbjct: 445 LSNLCARNGRWDDVNHLRKMMVDKGALKVPGCSSIEVNNVVHEFFSGDGVHSTSTILHHA 504
Query: 544 LEKLNRKMIKEGYVPDMSSVLH-DVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVK 602
L++L +++ GYVPD S V + D+E EK +L +HSEKLAI +GLL PPG IRVVK
Sbjct: 505 LDELVKELKLAGYVPDTSLVFYADIEDEEKEIVLRYHSEKLAITYGLLNTPPGTTIRVVK 564
Query: 603 NLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
NLRVC DCHNA K+IS I R+I++RD RFH FK+G+CSCGD+W
Sbjct: 565 NLRVCVDCHNAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 609
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 200/415 (48%), Gaps = 43/415 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D V +N + G+A A+ + + +L GL TFS++L + + ++
Sbjct: 95 IPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLP-DDYTFSSLLKACARLKALEE 153
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H +K G G ++V L++MY + A+R FD++ E +V
Sbjct: 154 GKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVV----------- 202
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
++ +IT +N EA+ LFRE++ GL T
Sbjct: 203 --------------------AYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVA 242
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L++C L AL+ G+ IH ++ +N V V +AL+DMY KC S+ A SVF+ M ++
Sbjct: 243 LSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDT 302
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
+W+AM+V Y +G +A+ + M++ ++PD+ T ++ +C++ +EEG + FH
Sbjct: 303 QAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHS 362
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD-EVSWTALVSGYAKFGK-- 356
+ G++ I ++ G+ G +E++ + +E+ ++ + W L+S + G
Sbjct: 363 MTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVE 422
Query: 357 -ANETID-LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
A I +FE SHG D V L + C+R G + H ++MV + ++
Sbjct: 423 MAKLVIQRIFELDDSHG--GDYVILSNL---CARNGRWDDVNHLRKMMVDKGALK 472
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 161/318 (50%), Gaps = 13/318 (4%)
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK----SIKYAESVFR 233
S+L+ +L E KQI A+ I+ H++N V + L++ +C S+ +A +F
Sbjct: 36 SSILSLIPKCTSLRELKQIQAYTIKT-HQNNPTVLTKLIN-FCTSNPTIASMDHAHRMFD 93
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE 293
+ ++V + M GY + A+ + + +G+ PDD+T S++ +CA L +LEE
Sbjct: 94 KIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLKALEE 153
Query: 294 GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK 353
G Q H ++ G+ + V L+ Y C +++ + R+F+++ V++ A+++ A+
Sbjct: 154 GKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAIITSCAR 213
Query: 354 FGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
+ NE + LF ++ GLKP +VT++ LS+C+ G ++ GR E VK+ G
Sbjct: 214 NSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHE-YVKKNGFDQYVK 272
Query: 414 HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL 473
T +ID+ ++ G L++A S MP D W+ ++ + HG+ G A L E+
Sbjct: 273 VNTALIDMYAKCGSLDDAVSVFKDMPR-RDTQAWSAMIVAYATHGH---GSQAISMLREM 328
Query: 474 D--PYNPASYVLLSSIYA 489
P L +YA
Sbjct: 329 KKAKVQPDEITFLGILYA 346
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/520 (41%), Positives = 326/520 (62%), Gaps = 1/520 (0%)
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL-EGLAMDQFTFGSVLTACGGL 187
++F ++ + +W TMI G ++ A++LF +M + D TF + A L
Sbjct: 90 QIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKL 149
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
+ + G+ IH+ ++RN FV ++LV MY + A VF M++++ V+W +++
Sbjct: 150 MDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVI 209
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
G+ NG EA+ ++ M G+EPD FT+ S++S+C L +L G + H + GL+
Sbjct: 210 NGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLV 269
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
SNAL+ Y KCGN D+ ++F+EM R VSWT+L+ G A G NE + LF ++
Sbjct: 270 QNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGEL 329
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
GLKP E+T +GVL ACS G++++G +YF M +EYGI P +H+ CM+D+L RAG+
Sbjct: 330 ERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGK 389
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSI 487
+ +A +I MP PP+A+ W TLL +C IHG++E+G+ A + L+ + +VLLS++
Sbjct: 390 VGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNL 449
Query: 488 YASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKL 547
YAS+ +W V +R+ M KGV+K PG S ++ K+RV+ F D S P S++ YA L K+
Sbjct: 450 YASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKI 509
Query: 548 NRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVC 607
+ + EGYVP +VL D+E EK L+HH+EK+AIAF L+ PPG PIR++KNLRVC
Sbjct: 510 TQLLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVC 569
Query: 608 SDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+DCH A K ISK+ +REI+VRD RFH FK+G CSC D+W
Sbjct: 570 ADCHLAIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 167/343 (48%), Gaps = 33/343 (9%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
+WN +I G A + + AV++++ M TF + + V LG IH
Sbjct: 102 TWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSV 161
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
+++ GF S FV + LV MY+ G E +
Sbjct: 162 VVRNGFDSLRFVQNSLVHMYSVFGF-------------------------------AESA 190
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
++F M +D ++W ++I G NG+ EA+ L+REM EG+ D FT S+L+AC L
Sbjct: 191 YQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVEL 250
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
AL G+++H ++++ N +AL+D+Y KC + + A+ VF M ++VVSWT+++
Sbjct: 251 GALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLI 310
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR-SLVTGL 306
VG NG EA+K+F ++R G++P + T V+ +C++ L+EG + R G+
Sbjct: 311 VGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGI 370
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALV 348
+ I +V + G + D++ M V + V W L+
Sbjct: 371 LPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLL 413
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 113/255 (44%), Gaps = 46/255 (18%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + D V+WN +I+G A +G N+A+ +Y M +G+ T ++L + L
Sbjct: 197 MSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGV-EPDGFTMVSLLSACVELGALAL 255
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G ++H +++K G + L+D+Y+K G DA++ FDE+ E+++V + ++I G
Sbjct: 256 GERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVG--- 312
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
L NGL EA+ LF E+ +GL + TF V
Sbjct: 313 ----------------------------LAVNGLGNEALKLFGELERQGLKPSEITFVGV 344
Query: 181 LTACGGLLALEEG-------KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
L AC L+EG K+ + + R +H +VD+ C+ + A R
Sbjct: 345 LYACSHCGMLDEGFNYFRRMKEEYGILPRIEHH------GCMVDLLCRAGKVGDAYDYIR 398
Query: 234 TMAW-KNVVSWTAML 247
M N V W +L
Sbjct: 399 NMPVPPNAVIWRTLL 413
>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/666 (36%), Positives = 377/666 (56%), Gaps = 56/666 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLK-DGLGNLSRITFSTMLIMSSSRRCVDLGRQ 63
D VSWN +I+ + G +A+ ++ MLK + +R+TF ++L S + GR+
Sbjct: 289 DVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGRE 348
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
IH HI + + + L+ Y+K + A+ F+ L ++I+
Sbjct: 349 IHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDII-------------- 394
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
SW +M+ G QN + D+F+ M L G+ D + + A
Sbjct: 395 -----------------SWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNA 437
Query: 184 C----GGLLALEEGKQIHAFIIRNDHKDNV--FVGSALVDMYCKCKSIKYAESVFRTMAW 237
GL+ GK+IH +I+R V V +A++ MY K I AE +F+ M
Sbjct: 438 ASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKN 497
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
++ SW AM+ GY +N E+ + IF ++ + G D +L +++SC L SL+ G QF
Sbjct: 498 RDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQF 557
Query: 298 HGRSLVTGLI---------SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
H ++V L S ++++NAL++ Y KCG+I+D+ ++F +M +D SWTA++
Sbjct: 558 H--AVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMI 615
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
+G A G A E + LFE+M + G+KP++VT + +L AC+ GLV++G +YF+ M +YG+
Sbjct: 616 TGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGGLVQEGSYYFDSMYNDYGL 675
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFIN-----KMPFPPDAIG-WATLLSSCRIHGNVEI 462
P +HY CMID+ R+G+ + AKS + P+ D + W LL +C +++
Sbjct: 676 SPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDILNLWKVLLGACHASKQLDL 735
Query: 463 GKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKS 522
G AA +LEL+P + A+Y+LL+++YAS G W+ ++R+ MR+KG+RK+ GCSWI +
Sbjct: 736 GVEAATKILELEPEDEATYILLANLYASSGLWEDAIKVRKAMRDKGLRKEVGCSWIDTGN 795
Query: 523 RVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEK 582
R H+F A D P +IY +L +LN + GYVP VLHDV+ +EK +L HSEK
Sbjct: 796 RRHVFVAGDVYHPQRKEIYEKLAQLNYSCRRMGYVPMTELVLHDVDETEKEAILGCHSEK 855
Query: 583 LAIAFGLLFIPPGLP-IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGEC 641
LA++FGLL G IRV+KNLRVC DCH+ K+ S + +REIL+RD+ RFHLF++G C
Sbjct: 856 LAVSFGLLNCGVGNGVIRVMKNLRVCEDCHSWMKFASLLEKREILLRDSQRFHLFRDGSC 915
Query: 642 SCGDFW 647
SCGD+W
Sbjct: 916 SCGDYW 921
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/469 (26%), Positives = 227/469 (48%), Gaps = 49/469 (10%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D + WN +I+ + HG + ++++ M+ G+ + +T+++++ S G +
Sbjct: 188 DILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMV 247
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG I+K G L N ++N+++T + G +
Sbjct: 248 HGRIIKAG------------------------------LEATN--LWNSLVTFYGKCGNL 275
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEG-LAMDQFTFGSVLT 182
+ + +LF + KD +SW MI Q G A+ LFR M ++E + ++ TF S+L+
Sbjct: 276 QHASQLFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLS 335
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
A GL AL G++IHA I R + + + ++L+ Y KC+ + A +F + ++++S
Sbjct: 336 AVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIIS 395
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS----LEEGTQFH 298
W +ML GY QN IF M +GIEPD +L + ++ + +S G + H
Sbjct: 396 WNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIH 455
Query: 299 G---RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
G R + G +S ++VSNA++ Y K I D+ ++F M RD SW A++ GY++
Sbjct: 456 GYILRRITPGGVS-LSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNA 514
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR--PIHD 413
K + + +F +L G D V+L +L++C R ++ G+ + ++ K + + P D
Sbjct: 515 KFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQD 574
Query: 414 HY----TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+I + S+ G +++A KM D W +++ C HG
Sbjct: 575 SLLSINNALISMYSKCGSIKDAAQVFLKME-RKDVFSWTAMITGCAHHG 622
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/512 (25%), Positives = 241/512 (47%), Gaps = 85/512 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
P D +SW+ LI+ ++ G+ A ++ M+ +GL + + +++L +S S + L
Sbjct: 81 FPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGL-QPNGFSLASLLKVSCSTGEIGL 139
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDE--LPEKNIVMYNTMITGL 118
RQ+HG ++ GFG + + + MY++ G++ DA+R FDE L +I+++N++I
Sbjct: 140 CRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAY 199
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+ G E RLF M ++ T + T+
Sbjct: 200 IFHGCWVEVLRLFCKMVSVGVVAPT------------------------------ELTYA 229
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
SV+ ACG + G +H II+ + + ++LV Y KC ++++A +F ++ K
Sbjct: 230 SVVNACGSSGEEKYGAMVHGRIIKAG-LEATNLWNSLVTFYGKCGNLQHASQLFERISRK 288
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQR--NGIEPDDFTLGSVISSCANLASLEEGTQ 296
+VVSW AM+ Q G E A+ +F M + ++P+ T S++S+ + L++L G +
Sbjct: 289 DVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGRE 348
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H L +++N+L+TFY KC + + +F + +RD +SW ++++GY + +
Sbjct: 349 IHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQ 408
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSR--AGLV--EKGRHYFEIMVKEYGIRPI- 411
D+F++M+ G++PD +L + +A SR +GL+ +G+ + Y +R I
Sbjct: 409 QGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKE-----IHGYILRRIT 463
Query: 412 ----------------------------------HDHYT--CMIDILSRAGRLEEAKSF- 434
D Y+ M+D SR + E+
Sbjct: 464 PGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIF 523
Query: 435 --INKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
I K FP D + + LL+SC ++++GK
Sbjct: 524 LDILKQGFPLDHVSLSILLTSCGRLVSLQLGK 555
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 195/396 (49%), Gaps = 28/396 (7%)
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+++LF ++D ISW+ +I + G +A LF++M EGL + F+ S+L
Sbjct: 74 AQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCS 133
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF--RTMAWKNVVSWT 244
+ +Q+H + IR + + +A + MY +C ++ A+ VF ++ +++ W
Sbjct: 134 TGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWN 193
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
+++ Y +GC E +++FC M G + P + T SV+++C + + G HGR +
Sbjct: 194 SIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIK 253
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
GL + + N+LVTFYGKCGN++ + +LF ++ +D VSW A+++ + G+ + L
Sbjct: 254 AGLEA-TNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGL 312
Query: 364 FEKML--SHGLKPDEVTLIGVLSACSRAGLVEKGR----HYFEIMVKEYGIRPIHDHYT- 416
F +ML ++P+ VT + +LSA S + GR H F + ++ + T
Sbjct: 313 FRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLE------VDTSITN 366
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN----VEIGKWAAESLLE 472
+I S+ + +A+ ++ D I W ++L+ + +I K S +E
Sbjct: 367 SLITFYSKCREVGKAREIFERL-LLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIE 425
Query: 473 LDP------YNPASYVLLSSIYASKGKWDHVSQLRR 502
D +N AS IY +GK H LRR
Sbjct: 426 PDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRR 461
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 132/272 (48%), Gaps = 7/272 (2%)
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+K A+ +F ++V+SW+A++ Y + G +A +F M G++P+ F+L S++
Sbjct: 71 LKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKV 130
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV--RDEV 342
+ + Q HG S+ TG + A +T Y +CG +ED+ R+F+E ++ D +
Sbjct: 131 SCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDIL 190
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEI 401
W ++++ Y G E + LF KM+S G + P E+T V++AC +G + G
Sbjct: 191 LWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGR 250
Query: 402 MVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
++K G+ + + ++ + G L+ A ++ D + W ++++ G E
Sbjct: 251 IIKA-GLEAT-NLWNSLVTFYGKCGNLQHASQLFERIS-RKDVVSWNAMIAANEQRGEGE 307
Query: 462 IGKWAAESLLELD-PYNPASYVLLSSIYASKG 492
+L+++ P P LS + A G
Sbjct: 308 NALGLFRRMLKVEPPVQPNRVTFLSLLSAVSG 339
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 12/176 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D SWN ++ G++ + D + ++ +LK G L ++ S +L + L
Sbjct: 495 MKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGF-PLDHVSLSILLTSCGRLVSLQL 553
Query: 61 GRQIHGHILKFGFG-------SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNT 113
G+Q H + K G S + + + L+ MY+K G I DA + F ++ K++ +
Sbjct: 554 GKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKDVFSWTA 613
Query: 114 MITGLLRRGLVEESRRLFRGMK----DKDSISWTTMITGLMQNGLEREAIDLFREM 165
MITG GL E+ +LF MK + +++ ++ GL +E F M
Sbjct: 614 MITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGGLVQEGSYYFDSM 669
>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
Length = 610
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/595 (38%), Positives = 348/595 (58%), Gaps = 34/595 (5%)
Query: 55 RRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTM 114
RR + GRQ+H ++ G+ +++ + LV MYA+ G + DA D
Sbjct: 48 RRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLD------------- 94
Query: 115 ITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
GM +++ +SWT MI+G QN EA DLF M G ++
Sbjct: 95 ------------------GMPERNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNE 136
Query: 175 FTFGSVLTACGGLLALEEG--KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
FT SVLT+C G + + KQ+HAF I+ + + ++FVGS+L+DMY + ++I+ A VF
Sbjct: 137 FTLASVLTSCTGSQGIHQHQIKQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVF 196
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
+ ++VVS+T +L GY + G EEA+ +F + G++ + T ++++ + L+S++
Sbjct: 197 DMLPARDVVSYTTILSGYTRLGLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMD 256
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
G Q HG L L F+ + N+L+ Y KCG + S R+F+ M R VSW A++ GY
Sbjct: 257 YGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYG 316
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
+ G A E + LF + + +KPD VTL+ VL S GLV++G F+ +VKE
Sbjct: 317 RHGMAYEVVQLF-RFMCDKVKPDSVTLLAVLLGYSHGGLVDEGLDMFDHIVKEQSTLLNT 375
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLE 472
HY C+ID+L R+G+LE+A I KMPF P W +LL +CR+H NV +G++ A+ L +
Sbjct: 376 QHYGCVIDLLGRSGQLEKALLLIQKMPFQPTRAIWGSLLGACRVHANVHVGEFVAQKLFD 435
Query: 473 LDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDW 532
++P N +YV+LS+IYA+ W V +LR+ M +K V K+PG SW+ +H F + +
Sbjct: 436 IEPENAGNYVILSNIYAAARMWKDVFRLRKLMLKKTVIKEPGRSWMILDKVIHTFHSSER 495
Query: 533 SSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFI 592
P + I ++ ++ + G+VPD+S VLHDV+ +K +ML HSEKLAI FGL+
Sbjct: 496 FHPRKEDINVKINEIYAAIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMST 555
Query: 593 PPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
P L I+V+KNLR+C DCHN K++SK+ REI +RD RFHL G C+CGD+W
Sbjct: 556 PSDLTIQVMKNLRICVDCHNFAKFVSKVYGREISLRDKNRFHLITEGACTCGDYW 610
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 179/340 (52%), Gaps = 38/340 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW +ISG++ + +A ++ +ML+ G + T +++L + + +
Sbjct: 96 MPERNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGC-EPNEFTLASVLTSCTGSQGIHQ 154
Query: 61 G--RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
+Q+H +K F ++FVGS L+DMYA+ I +A+R FD LP +++V Y T+++G
Sbjct: 155 HQIKQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGY 214
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
R GL E EA++LFR++ EG+ +Q TF
Sbjct: 215 TRLGLDE-------------------------------EALNLFRQLYNEGMQCNQVTFS 243
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
+L A GL +++ GKQ+H I+R + + + ++L+DMY KC + Y+ VF M +
Sbjct: 244 VLLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDNMPER 303
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+VVSW AML+GYG++G + E V++F M + ++PD TL +V+ ++ ++EG
Sbjct: 304 SVVSWNAMLMGYGRHGMAYEVVQLFRFMC-DKVKPDSVTLLAVLLGYSHGGLVDEGLDMF 362
Query: 299 GRSLVTGLISFITVSN--ALVTFYGKCGNIEDSHRLFNEM 336
+V + + + ++ G+ G +E + L +M
Sbjct: 363 DH-IVKEQSTLLNTQHYGCVIDLLGRSGQLEKALLLIQKM 401
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 156/284 (54%), Gaps = 4/284 (1%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
+ + +T C G AL EG+Q+HA ++ ++ +++ + LV MY +C +++ A +V M
Sbjct: 38 YDAAITECVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMP 97
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT- 295
+NVVSWTAM+ GY QN EA +F M R G EP++FTL SV++SC + +
Sbjct: 98 ERNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQI 157
Query: 296 -QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
Q H ++ + V ++L+ Y + NI+++ R+F+ + RD VS+T ++SGY +
Sbjct: 158 KQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRL 217
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G E ++LF ++ + G++ ++VT +L+A S ++ G+ ++++ +
Sbjct: 218 GLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRR-ELPFFMAL 276
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ID+ S+ G+L ++ + MP + W +L HG
Sbjct: 277 QNSLIDMYSKCGKLLYSRRVFDNMP-ERSVVSWNAMLMGYGRHG 319
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/639 (36%), Positives = 356/639 (55%), Gaps = 32/639 (5%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN + A A+ +Y ML+ G + TF L ++ LG Q HG I
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHG-DRPNAFTFPFALKSCAALSLPILGSQFHGQI 75
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
K G FV + L+ MY K L+ +A++ F+E N SR
Sbjct: 76 TKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEE----NF-----------------HSR 114
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
+L ++ + +++G + N EA+ LFR+M EG+ ++ T ++ AC +
Sbjct: 115 KL--------TVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPI 166
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
LE G +H ++ +V V + + MY KC S+ YA+ +F M K ++SW AM+
Sbjct: 167 NLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVS 226
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
GY QNG + ++++ NM NG+ PD TL V+SSCANL + G + + +G S
Sbjct: 227 GYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTS 286
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
++NAL+ Y +CGN+ + +F+ M R VSWTA++ GY G + LF++M+
Sbjct: 287 NPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMI 346
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
G++PD + VLSACS AGL ++G YF++M + Y + P +HY+CM+D+L RAGRL
Sbjct: 347 RSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRL 406
Query: 429 EEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIY 488
+EA++ I MP PD W LL +C+IH NVE+ + A E ++EL+P N YVLLS+IY
Sbjct: 407 KEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIY 466
Query: 489 ASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLN 548
++ V ++R M+EK ++KDPGCS+++ K RVH F D + SD+IY LE+L
Sbjct: 467 SNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELE 526
Query: 549 RKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCS 608
+++E P+ + + + + HSEKLA+AFGLL G + ++KNLR+C
Sbjct: 527 AIIMQEFGKPEKDN--REESNKDGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICE 584
Query: 609 DCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
DCH K +SKI R++ VRDA RFH F+NG CSC D+W
Sbjct: 585 DCHLFFKMVSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 623
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 187/380 (49%), Gaps = 8/380 (2%)
Query: 139 SISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHA 198
S W T + L + +A+ L+ +M G + FTF L +C L G Q H
Sbjct: 14 STPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHG 73
Query: 199 FIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT--MAWKNVVSWTAMLVGYGQNGCS 256
I + FV + L+ MYCK + A VF + K V + A++ GY N
Sbjct: 74 QITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKC 133
Query: 257 EEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNAL 316
EAV +F M G+ + TL +I +C + +LE G+ H +L G S ++V N
Sbjct: 134 SEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCF 193
Query: 317 VTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDE 376
+T Y KCG++ + +LF+EM V+ +SW A+VSGYA+ G A ++L+ M +G+ PD
Sbjct: 194 ITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDP 253
Query: 377 VTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFIN 436
VTL+GVLS+C+ G G H E ++ G +I++ +R G L +A++ +
Sbjct: 254 VTLVGVLSSCANLGAQSVG-HEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFD 312
Query: 437 KMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLE--LDPYNPASYVLLSSIYASKGKW 494
MP + W ++ +HG+ EI + ++ ++P + ++V + S + G
Sbjct: 313 GMP-ERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEP-DGTAFVCVLSACSHAGLT 370
Query: 495 DHVSQLRRTMREKGVRKDPG 514
D + + M+ + + +PG
Sbjct: 371 DQGLEYFKMMK-RNYQLEPG 389
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 115/254 (45%), Gaps = 44/254 (17%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP +SWN ++SG+A +G + +++Y M +G+ + +T +L C +L
Sbjct: 213 MPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGV-HPDPVTLVGVL-----SSCANL 266
Query: 61 GRQIHGHILKF-----GFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
G Q GH ++F GF S F+ + L++MYA+ G + A+ FD +PE+ +V
Sbjct: 267 GAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLV------ 320
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
SWT +I G +G A+ LF+EM G+ D
Sbjct: 321 -------------------------SWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGT 355
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESVFRT 234
F VL+AC ++G + + RN + S +VD+ + +K A+++ +
Sbjct: 356 AFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIES 415
Query: 235 MAWK-NVVSWTAML 247
M K + W A+L
Sbjct: 416 MPIKPDGAVWGALL 429
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 256/669 (38%), Positives = 375/669 (56%), Gaps = 71/669 (10%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSWN +IS + + +A+ ++ML+ G+ + +T +++L S + G++I
Sbjct: 251 DLVSWNTIISSLSQNDRFEEALLYLHVMLQSGV-RPNGVTLASVLPACSHLEMLGCGKEI 309
Query: 65 HGHIL-KFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
H +L FVG LVDMY + PEK
Sbjct: 310 HAFVLMNNDLIENSFVGCALVDMYCNC-----------KQPEK----------------- 341
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQFTFGSVLT 182
R +F GM + W MI G ++N + EAI+LF EM E GL+ + T SVL
Sbjct: 342 ---GRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLP 398
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
AC + + + IH+ +++ + + +V +AL+DMY + I+ A S+F +M K++VS
Sbjct: 399 ACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVS 458
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIE------------------PDDFTLGSVISS 284
W M+ GY G ++A+ + +MQR E P+ TL +V+
Sbjct: 459 WNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPG 518
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
CA LA+L +G + H ++ L + V +ALV Y KCG + S +F +M+VR+ ++W
Sbjct: 519 CAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITW 578
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHG-----LKPDEVTLIGVLSACSRAGLVEKGRHYF 399
L+ Y GK E + LF +M+ G ++P+EVT I + ++ S +G+V++G + F
Sbjct: 579 NVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLF 638
Query: 400 EIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI-GWATLLSSCRIHG 458
M ++GI P DHY C++D+L R+G++EEA + I MP + W++LL +C+IH
Sbjct: 639 YTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQ 698
Query: 459 NVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWI 518
N+EIG+ AA++L LDP VL Y +K S L R M+EKGVRK+PGCSWI
Sbjct: 699 NLEIGEIAAKNLFVLDPN-----VL---DYGTKQ-----SMLGRKMKEKGVRKEPGCSWI 745
Query: 519 KYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNH 578
++ VH F A D S P S +++ LE L+ +M KEGYVPD S VLH+V EK ML
Sbjct: 746 EHGDEVHKFLAGDVSHPQSKEVHEYLETLSLRMKKEGYVPDTSCVLHNVGEEEKETMLCG 805
Query: 579 HSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKN 638
HSE+LAIAFGLL PG IRV KNLRVC+DCH ATK+ISKI REI++RD RFH F+N
Sbjct: 806 HSERLAIAFGLLNTSPGTTIRVAKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRN 865
Query: 639 GECSCGDFW 647
G CSCGD+W
Sbjct: 866 GTCSCGDYW 874
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 152/530 (28%), Positives = 239/530 (45%), Gaps = 62/530 (11%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSWN +I+ AV ++ LML + +G S S S+ + LG+Q+
Sbjct: 150 DDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQV 209
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +L+ G F + LV MYAKLG +Y+AK FD +K++V +N
Sbjct: 210 HAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWN------------ 256
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
T+I+ L QN EA+ M G+ + T SVL AC
Sbjct: 257 -------------------TIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPAC 297
Query: 185 GGLLALEEGKQIHAFII-RNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
L L GK+IHAF++ ND +N FVG ALVDMYC CK + VF M + + W
Sbjct: 298 SHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVW 357
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRN-GIEPDDFTLGSVISSCANLASLEEGTQFHGRSL 302
AM+ GY +N EA+++F M G+ P+ TL SV+ +C S + H +
Sbjct: 358 NAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVV 417
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
G V NAL+ Y + G IE + +F MN +D VSW +++GY G+ ++ ++
Sbjct: 418 KWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALN 477
Query: 363 LFEKML------------------SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
L M + LKP+ VTL+ VL C+ + KG+ VK
Sbjct: 478 LLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVK 537
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
+ + + + ++D+ ++ G L +++ +M + I W L+ + +HG E
Sbjct: 538 QMLSKDVAVG-SALVDMYAKCGCLNLSRTVFEQMSV-RNVITWNVLIMAYGMHGKGEEAL 595
Query: 465 WAAESLL-------ELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREK 507
++ E+ P N +Y+ + + + G D L TM+ K
Sbjct: 596 KLFRRMVEEGDNNREIRP-NEVTYIAIFASLSHSGMVDEGLNLFYTMKAK 644
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 136/446 (30%), Positives = 211/446 (47%), Gaps = 42/446 (9%)
Query: 12 LISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKF 71
L S S + + A+ Y M+ G+ F +L ++ + ++LG+Q+H H+ KF
Sbjct: 56 LRSQTQSSSTFHQAISTYTNMVTAGVPP-DNFAFPAVLKATAGIQDLNLGKQLHAHVFKF 114
Query: 72 GFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLF 131
G V + LV+MY K G I + +RR+F
Sbjct: 115 GQALPTAVPNSLVNMYGKCGDI-------------------------------DAARRVF 143
Query: 132 RGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL-AL 190
+ ++D +SW +MI + A+ LFR M LE + FT SV AC L+ L
Sbjct: 144 DEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGL 203
Query: 191 EEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGY 250
GKQ+HAF++RN F +ALV MY K + A+++F K++VSW ++
Sbjct: 204 LLGKQVHAFVLRNGDW-RTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSL 262
Query: 251 GQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG-LISF 309
QN EEA+ M ++G+ P+ TL SV+ +C++L L G + H L+ LI
Sbjct: 263 SQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIEN 322
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
V ALV Y C E +F+ M R W A+++GY + E I+LF +M+
Sbjct: 323 SFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVF 382
Query: 370 H-GLKPDEVTLIGVLSACSR--AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
GL P+ VTL VL AC R + L ++G H V ++G ++D+ SR G
Sbjct: 383 ELGLSPNSVTLSSVLPACVRCESFLDKEGIHS---CVVKWGFEKDKYVQNALMDMYSRMG 439
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLS 452
R+E A+S M D + W T+++
Sbjct: 440 RIEIARSIFGSMN-RKDIVSWNTMIT 464
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 108/214 (50%), Gaps = 7/214 (3%)
Query: 243 WTAMLVGYGQNGCS-EEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
W + L Q+ + +A+ + NM G+ PD+F +V+ + A + L G Q H
Sbjct: 52 WVSHLRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHV 111
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
G V N+LV YGKCG+I+ + R+F+E+ RD+VSW ++++ +F + +
Sbjct: 112 FKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAV 171
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSR--AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
LF ML + P TL+ V ACS GL+ G+ +++ R ++ ++
Sbjct: 172 HLFRLMLLENVGPTSFTLVSVAHACSNLINGLL-LGKQVHAFVLRNGDWRTFTNN--ALV 228
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+ ++ GR+ EAK+ + D + W T++SS
Sbjct: 229 TMYAKLGRVYEAKTLFDVFD-DKDLVSWNTIISS 261
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/613 (37%), Positives = 351/613 (57%), Gaps = 46/613 (7%)
Query: 43 ITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSY-----VFVGSPLVDMYAKLGLIYDAK 97
++ + ++ + D GR IH H+ G + +FV + L MYAK GL+ DA
Sbjct: 65 VSLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLLDDAL 124
Query: 98 RGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQ-NGLER 156
R +F GM ++ ++WTT++ L +G ++
Sbjct: 125 R-------------------------------MFDGMPVRNVVTWTTVVAALASADGRKQ 153
Query: 157 EAIDLFREMRLEGLAMDQFTFGSVLTACG--GLLALEEGKQIHAFIIRNDHKDNVFVGSA 214
EA+ MR +G+A + +TF SVL AC G+L +HA ++ +VFV S+
Sbjct: 154 EALRFLVAMRRDGVAPNAYTFSSVLGACTTPGMLT-----AVHASTVKAGLDSDVFVRSS 208
Query: 215 LVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD 274
L+D Y K + VF M +++V W +++ G+ Q+G A+++F M+ G +
Sbjct: 209 LIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSN 268
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN 334
TL SV+ +C + LE G Q H V + + NAL+ Y KCG++ED+ LF+
Sbjct: 269 QGTLTSVLRACTGMVMLEAGRQVHAH--VLKYDRDLILHNALLDMYCKCGSLEDADALFH 326
Query: 335 EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEK 394
M RD +SW+ +VSG A+ GK+ E + +F+ M S G+ P+ VT++GVL ACS AGLVE
Sbjct: 327 RMPQRDVISWSTMVSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVED 386
Query: 395 GRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
G HYF M + +GI+P +H+ CM+D+L RAG+L+EA FI+ M PD++ W TLL +C
Sbjct: 387 GWHYFRSMKRLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGAC 446
Query: 455 RIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPG 514
R+H N + +AA +L+L+P + + VLLS+ YA +W + + MR++G+RK+PG
Sbjct: 447 RMHKNASLAAYAAREILKLEPDDQGARVLLSNTYADLRQWTDAEKPWKAMRDRGMRKEPG 506
Query: 515 CSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIK 574
SWI+ + RVH+F A D S P SD I EL +L ++ GYVP VL D+ +K
Sbjct: 507 RSWIELEKRVHVFIAGDLSHPCSDTIIQELNRLIGRIKSLGYVPQTEFVLQDLPTEQKED 566
Query: 575 MLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFH 634
+L +HSEK+AI FG + G PIR++KNLR+C DCH K +SK R I++RD VRFH
Sbjct: 567 LLKYHSEKMAIVFGTMHAVDGKPIRIMKNLRICGDCHAFAKLVSKSEGRVIVIRDPVRFH 626
Query: 635 LFKNGECSCGDFW 647
F++G CSCGD+W
Sbjct: 627 HFQDGACSCGDYW 639
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 193/379 (50%), Gaps = 42/379 (11%)
Query: 1 MPFHDGVSWNLLISGHAS-HGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
MP + V+W +++ AS G +A++ M +DG+ + TFS++L ++ +
Sbjct: 130 MPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAP-NAYTFSSVLGACTTPGMLT 188
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+H +K G S VFV S L+D Y KLG +
Sbjct: 189 ---AVHASTVKAGLDSDVFVRSSLIDAYVKLGDL-------------------------- 219
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ RR+F M +D + W ++I G Q+G AI+LF M+ G + +Q T S
Sbjct: 220 -----DGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTS 274
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL AC G++ LE G+Q+HA +++ D ++ + +AL+DMYCKC S++ A+++F M ++
Sbjct: 275 VLRACTGMVMLEAGRQVHAHVLKYDR--DLILHNALLDMYCKCGSLEDADALFHRMPQRD 332
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FH 298
V+SW+ M+ G QNG S EA+++F M+ G+ P+ T+ V+ +C++ +E+G F
Sbjct: 333 VISWSTMVSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFR 392
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKA 357
+ G+ N +V G+ G ++++ + M++ D V W L+ G + K
Sbjct: 393 SMKRLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLL-GACRMHK- 450
Query: 358 NETIDLFEKMLSHGLKPDE 376
N ++ + L+PD+
Sbjct: 451 NASLAAYAAREILKLEPDD 469
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 238/628 (37%), Positives = 343/628 (54%), Gaps = 34/628 (5%)
Query: 22 VNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL--GRQIHGHILKFGFGSYVFV 79
+ A+ ++ L + L N S +T L S+SR L G Q+H LK + V
Sbjct: 50 TSSALHLHALRVHCLLPNPSHLTIPIAL-KSASRLPHPLRAGEQLHARSLKLPSHTNPHV 108
Query: 80 GSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDS 139
+ L+ +YAK GL++ A+R FDE M +
Sbjct: 109 LTSLLSLYAKCGLLHRAQRVFDE-------------------------------MPHPST 137
Query: 140 ISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAF 199
+ WT +IT M G REA+ + R G+ D FT VLTAC + L G+ +
Sbjct: 138 VPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRA 197
Query: 200 IIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEA 259
+ +VFV +A VD+Y KC + A VF M K+ V+W AM+ GY NG EA
Sbjct: 198 AEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREA 257
Query: 260 VKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTF 319
+ +F MQ G++PD + + +S+C L +L+ G Q + + AL+
Sbjct: 258 LDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDM 317
Query: 320 YGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTL 379
Y KCG+ ++ +F +M +D + W A++ G G L +M G+K ++ T
Sbjct: 318 YAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTF 377
Query: 380 IGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP 439
IG+L +C+ GL++ GR YF M K Y I P +HY CM+D+LSRAG L+EA ++ MP
Sbjct: 378 IGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMP 437
Query: 440 FPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQ 499
P +A+ LL C+IH N E+ + + L+ L+P+N +YV+LS+IY+++G+W+ ++
Sbjct: 438 MPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAK 497
Query: 500 LRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPD 559
LR M+ KGV K P CSW++++ +VH F D S P SDQIY +L++L +M GY P
Sbjct: 498 LRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPT 557
Query: 560 MSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISK 619
V+ DVE EK L HHSEKLAIAF LL PG IRV KNLRVCSDCH A K +S+
Sbjct: 558 TEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSR 617
Query: 620 ITQREILVRDAVRFHLFKNGECSCGDFW 647
IT REI+VRD RFH F++G CSC D+W
Sbjct: 618 ITHREIIVRDNNRFHCFRDGSCSCNDYW 645
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 160/339 (47%), Gaps = 37/339 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP V W LI+ + G + +AV V +G+ S F+ + ++++ R DL
Sbjct: 132 MPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDS---FTAVRVLTACARIADL 188
Query: 61 --GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G + + G VFV + VD+Y K G + A+ FD++ K+ V + M
Sbjct: 189 ATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAM---- 244
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+ G NG REA+DLF M+ EG+ D +
Sbjct: 245 ---------------------------VGGYASNGHPREALDLFLAMQAEGMKPDCYAVA 277
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
L+AC L AL+ G+Q + ++ DN +G+AL+DMY KC S A VF+ M K
Sbjct: 278 GALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKK 337
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-F 297
+++ W AM++G G G + A + M+++G++ +D T ++ SC + +++G + F
Sbjct: 338 DIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYF 397
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
H + + + I +V + G ++++H+L ++M
Sbjct: 398 HNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDM 436
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 96/226 (42%), Gaps = 48/226 (21%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRR--CV 58
M D V+W ++ G+AS+G +A+ ++ M +G+ ++ +S+ R +
Sbjct: 233 MRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGM---KPDCYAVAGALSACTRLGAL 289
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
DLGRQ + F +G+ L+DMYAK G +A F ++ +K+I+++N MI GL
Sbjct: 290 DLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGL 349
Query: 119 -----------------------------------LRRGLVEESRRLFRGMKDKDSIS-- 141
GL+++ RR F M IS
Sbjct: 350 GMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPR 409
Query: 142 ---WTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ M+ L + GL +EA L +M + A+ G++L C
Sbjct: 410 IEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAV---ILGALLGGC 452
>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
Length = 1134
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 245/656 (37%), Positives = 372/656 (56%), Gaps = 44/656 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW L+SGH +G +N ++ ++ M + G+ + TFST L ++
Sbjct: 430 MPERNVVSWTALMSGHVLNGDLNGSLSLFTEMGRQGI-YPNEFTFSTNLKACGLLNALEK 488
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G QIHG LK GF V VG+ LVDMY+K G I
Sbjct: 489 GLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI--------------------------- 521
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM--DQFTFG 178
E+ ++FR M + ISW MI G + G A+ F M+ + D+FT
Sbjct: 522 ----NEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLT 577
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
S+L AC + GKQIH F++R+ + + +LVD+Y KC ++ A F +
Sbjct: 578 SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIK 637
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
K ++SW+++++GY Q G EA+ +F +Q + D F L S+I A+ A L++G Q
Sbjct: 638 EKTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQ 697
Query: 297 FHGRSLVTGLISFI--TVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
++LV L S + +VSN+LV Y KCG ++++ + F EM ++D +SWT +++GY K
Sbjct: 698 M--QALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKH 755
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G + + +F KML H ++PDEV + VLSACS +G++++G F +++ GI+P +H
Sbjct: 756 GLGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEH 815
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
Y C++D+L RAGRL+EAK ++ MP P+ W TLLS CR+HG++E+GK + LL +D
Sbjct: 816 YACVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRID 875
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS 534
NPA+YV++S++Y G W+ R KG++K+ G SW++ + VH F + + S
Sbjct: 876 GKNPANYVMMSNLYGQAGYWNEQGNARELGSIKGLQKEAGMSWVEIEREVHFFRSGEDSH 935
Query: 535 PYSDQIYAELEKLNRKMIKE-GYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLL--- 590
P + I L+++ R++ +E GYV + LHD++ K + L HSEKLAI L
Sbjct: 936 PLTLVIQETLKEVERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGG 995
Query: 591 FIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDF 646
G IRV KNLRVC DCH K +SKIT+ +VRDAVRFH F++G CSCGD+
Sbjct: 996 LNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1051
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 134/473 (28%), Positives = 220/473 (46%), Gaps = 72/473 (15%)
Query: 72 GFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLF 131
G G + + L+DMY K A + FD +PE+N+V
Sbjct: 399 GSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVV---------------------- 436
Query: 132 RGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALE 191
SWT +++G + NG ++ LF EM +G+ ++FTF + L ACG L ALE
Sbjct: 437 ---------SWTALMSGHVLNGDLNGSLSLFTEMGRQGIYPNEFTFSTNLKACGLLNALE 487
Query: 192 EGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYG 251
+G QIH F ++ + V VG++LVDMY KC I AE VFR M ++++SW AM+ GY
Sbjct: 488 KGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRWMVGRSLISWNAMIAGYV 547
Query: 252 QNGCSEEAVKIFCNMQRNGIE--PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL--I 307
G A+ F MQ I+ PD+FTL S++ +C++ + G Q HG + +G
Sbjct: 548 HAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCP 607
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
S T++ +LV Y KCGN+ + + F+++ + +SW++L+ GYA+ G E + LF+++
Sbjct: 608 SSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLILGYAQEGDFVEAMGLFKRL 667
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK----------------------- 404
+ D L ++ + L+++G+ ++VK
Sbjct: 668 QELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLETSVSNSLVDMYLKCGLV 727
Query: 405 --------EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM---PFPPDAIGWATLLSS 453
E ++ + +T MI + G ++A S NKM PD + + +LS+
Sbjct: 728 DEAEKCFAEMQLKDVIS-WTVMITGYGKHGLGKKAVSIFNKMLRHNIEPDEVCYLAVLSA 786
Query: 454 CRIHGNVEIGKWAAESLLELDPYNP--ASYVLLSSIYASKGKWDHVSQLRRTM 504
C G ++ G+ LLE P Y + + G+ L TM
Sbjct: 787 CSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGRLKEAKHLVDTM 839
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 243/650 (37%), Positives = 362/650 (55%), Gaps = 74/650 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP+ D VS+N LI+ AS+G A+KV M +DG +S + + + + +DL
Sbjct: 115 MPYRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGF---QPTQYSHVNALQACSQLLDL 171
Query: 61 --GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G+QIHG I+ G FV + + DMYAK G I
Sbjct: 172 RHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDI------------------------- 206
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+++R LF GM DK+ +SW MI+G ++ G E I LF EM+L GL D T
Sbjct: 207 ------DKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVS 260
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
+VL A Y +C + A ++F + K
Sbjct: 261 NVLNA-----------------------------------YFRCGRVDDARNLFIKLPKK 285
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+ + WT M+VGY QNG E+A +F +M R ++PD +T+ S++SSCA LASL G H
Sbjct: 286 DEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVH 345
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G+ +V G+ + + VS+ALV Y KCG D+ +F M +R+ ++W A++ GYA+ G+
Sbjct: 346 GKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVL 405
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
E + L+E+M KPD +T +GVLSAC A +V++G+ YF+ + E+GI P DHY CM
Sbjct: 406 EALTLYERMQQENFKPDNITFVGVLSACINADMVKEGQKYFD-SISEHGIAPTLDHYACM 464
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
I +L R+G +++A I MP P+ W+TLLS C G+++ + AA L ELDP N
Sbjct: 465 ITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLLSVC-AKGDLKNAELAASHLFELDPRNA 523
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
Y++LS++YA+ G+W V+ +R M+EK +K SW++ ++VH F ++D P
Sbjct: 524 GPYIMLSNLYAACGRWKDVAVVRSLMKEKNAKKFAAYSWVEVGNKVHRFVSEDHYHPEVG 583
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGL-P 597
+IY EL +L + + GY PD + VLH+V EK + +++HSEKLA+AF L+ P G+ P
Sbjct: 584 KIYGELNRLISILQQIGYNPDTNIVLHNVGEEEKFRSISYHSEKLALAFALIRKPNGVAP 643
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
IR++KN+RVC DCH K+ S R I++RD+ RFH F G+CSC D W
Sbjct: 644 IRIIKNIRVCDDCHVFMKFASITISRPIIMRDSNRFHHFFGGKCSCNDNW 693
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 190/383 (49%), Gaps = 37/383 (9%)
Query: 78 FVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDK 137
F+ + L+ +YAK G + DA+ FD + ++++ +NT+++ + G+VE +F M +
Sbjct: 59 FIHNQLLHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYR 118
Query: 138 DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIH 197
DS+S+ T+I NG +A+ + M+ +G Q++ + L AC LL L GKQIH
Sbjct: 119 DSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIH 178
Query: 198 AFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSE 257
I+ D +N FV +A+ DMY KC I A +F M KNVVSW M+ GY + G
Sbjct: 179 GRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPN 238
Query: 258 EAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALV 317
E + +F MQ +G++PD +TVSN L
Sbjct: 239 ECIHLFNEMQLSGLKPD----------------------------------LVTVSNVLN 264
Query: 318 TFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEV 377
++ +CG ++D+ LF ++ +DE+ WT ++ GYA+ G+ + LF ML +KPD
Sbjct: 265 AYF-RCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSY 323
Query: 378 TLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINK 437
T+ ++S+C++ + G+ V GI + ++D+ + G +A+
Sbjct: 324 TISSMVSSCAKLASLYHGQ-VVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFET 382
Query: 438 MPFPPDAIGWATLLSSCRIHGNV 460
MP + I W ++ +G V
Sbjct: 383 MPI-RNVITWNAMILGYAQNGQV 404
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/602 (37%), Positives = 352/602 (58%), Gaps = 32/602 (5%)
Query: 47 TMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEK 106
+++ SS V IH ++K S F+G LV MY KLG YD
Sbjct: 124 SLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLG--YD----------- 170
Query: 107 NIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR 166
E+++RLF M +KD +SW ++++GL G ++ F MR
Sbjct: 171 ------------------EDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMR 212
Query: 167 LE-GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI 225
E G ++ T SV++AC + AL+EGK +H +++ V ++L++MY K +
Sbjct: 213 TESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFL 272
Query: 226 KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
A +F M +++VSW +M+V + NG +E+ + +F M+R GI PD T+ +++ +C
Sbjct: 273 DAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRAC 332
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
+ + H G + I ++ AL+ Y K G + S +F E+ RD ++WT
Sbjct: 333 TDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWT 392
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE 405
A+++GYA E I LF+ M+ G++ D VT +LSACS +GLVE+G+ YFEIM +
Sbjct: 393 AMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEV 452
Query: 406 YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKW 465
Y + P DHY+CM+D+L R+GRLE+A I MP P + W LL +CR++GNVE+GK
Sbjct: 453 YRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKE 512
Query: 466 AAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVH 525
AE LL LDP + +Y++LS+IY++ G W S++R M+E+ + ++PGCS+I++ +++H
Sbjct: 513 VAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIH 572
Query: 526 IFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAI 585
F D P SD+I+ +LE+L RK+ + G P VLHD++ K+ M+N HSEKLAI
Sbjct: 573 RFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAI 632
Query: 586 AFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGD 645
AFGLL G+P+ + KNLR+C DCH+ K+ S + +R I++RD+ RFH F +G CSC D
Sbjct: 633 AFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRD 692
Query: 646 FW 647
+W
Sbjct: 693 YW 694
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 184/394 (46%), Gaps = 36/394 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN L+SG + G + + + M + + +T +++ + +D
Sbjct: 180 MPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDE 239
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +HG ++K G V + L++MY KLG +
Sbjct: 240 GKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFL--------------------------- 272
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ + +LF M + +SW +M+ NG + +DLF M+ G+ DQ T ++
Sbjct: 273 ----DAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVAL 328
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC + + IHA+I R ++ + +AL+++Y K + +E +F + ++
Sbjct: 329 LRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDR 388
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
++WTAML GY + C EA+K+F M + G+E D T ++S+C++ +EEG + F
Sbjct: 389 IAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEI 448
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKAN 358
S V + + + +V G+ G +ED++ L M + W AL+ +G
Sbjct: 449 MSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVE 508
Query: 359 ETIDLFEKMLSHGLKP-DEVTLIGVLSACSRAGL 391
++ E++LS L P D I + + S AGL
Sbjct: 509 LGKEVAEQLLS--LDPSDHRNYIMLSNIYSAAGL 540
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/618 (38%), Positives = 355/618 (57%), Gaps = 39/618 (6%)
Query: 32 MLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLG 91
ML+ G+ TF ++ S R + G +IH ++KFG+ S VF+ + L+ MY K
Sbjct: 1 MLRLGI-QPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCD 59
Query: 92 LIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQ 151
E SR++F M DK+++SW+ +I +Q
Sbjct: 60 K-------------------------------YELSRQVFDEMPDKNAVSWSAIIGACLQ 88
Query: 152 NGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFV 211
+ +E LFR+M EG + + G++L A + + EE ++ ++ N + V
Sbjct: 89 DDRCKEGFSLFRQMLSEG---SRPSRGAILNAMACVRSHEEADDVYRVVVENGLDFDQSV 145
Query: 212 GSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGI 271
SA M+ +C ++ A +F + K++V+W + Y + EA+ + M GI
Sbjct: 146 QSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTIEAYVKADMPLEALGLLKQMMLQGI 205
Query: 272 EPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI--SFITVSNALVTFYGKCGNIEDS 329
PD TL VI +C+ LAS + HG + TG + V AL+ Y KCG++ +
Sbjct: 206 FPDAITLLGVIRACSTLASFQLAHIVHG-IITTGFFYNQLLAVETALIDLYVKCGSLTYA 264
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
++F+ M R+ ++W+A++SGY G E ++LF++M + +KPD +T + +LSACS +
Sbjct: 265 RKVFDGMQERNIITWSAMISGYGMHGWGREALNLFDQMKA-SVKPDHITFVSILSACSHS 323
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
GLV +G F M +++G+ P +HY CM+DIL RAG+L+EA FI +MP P+A W
Sbjct: 324 GLVAEGWECFNSMARDFGVTPRPEHYACMVDILGRAGKLDEACDFIERMPVRPNAAVWGA 383
Query: 450 LLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
LL +CRIH NV++ + A +L +LDP+N YV+L +IY GK +R M+ +GV
Sbjct: 384 LLGACRIHLNVDLAEMVARALFDLDPHNAGRYVILYNIYTLTGKRKEADSIRTLMKNRGV 443
Query: 510 RKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVEL 569
+K G S I+ K++++ F A D S P +D IY+ELE+L ++ +EGY PD++ VLHDV+
Sbjct: 444 KKIAGYSVIEIKNKLYAFVAGDRSHPQTDLIYSELERLMDRIRQEGYTPDINFVLHDVDE 503
Query: 570 SEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRD 629
K ML HSEKLAI FGLL + PG IR+ KNLRVC DCH ATK+ISK+T REI+VRD
Sbjct: 504 ETKESMLYLHSEKLAIVFGLLNLGPGSVIRIRKNLRVCGDCHTATKFISKVTGREIVVRD 563
Query: 630 AVRFHLFKNGECSCGDFW 647
A RFH FKNG CSC D+W
Sbjct: 564 AHRFHHFKNGACSCRDYW 581
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/525 (42%), Positives = 321/525 (61%), Gaps = 1/525 (0%)
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
++ + LF + DKD I + M G ++ A LF E+ GL D +TF S+L A
Sbjct: 80 MDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKA 139
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C AL EG +H F ++ N+++ L++MY +C + A VF M +VS+
Sbjct: 140 CASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSY 199
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
A++ GY ++ EA+ +F +Q + IEP D T+ SVI SCA L +L+ G H
Sbjct: 200 NAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKK 259
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
G ++ V+ AL+ + KCG++ D+ +F M VRD +W+A++ +A G + I +
Sbjct: 260 KGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISM 319
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
FE+M G++PDE+T +G+L ACS AGLVE+GR YF M K YGI P HY CM+D+L
Sbjct: 320 FEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLG 379
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
RAG L+EA +F++K+ I W TLLS+C HGNVE+ K E + ELD + YV+
Sbjct: 380 RAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVI 439
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LS++YA G+W+ V+ LR+ M+++GV K PGCS ++ + VH F + D S ++
Sbjct: 440 LSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRA 499
Query: 544 LEKLNRKMIKEGYVPDMSSVLH-DVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVK 602
L++L +++ GYVPD S V H D+E K +L +HSEKLA+AFGLL PPG IRV K
Sbjct: 500 LDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVAK 559
Query: 603 NLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
NLR+C DCHNA K IS I R+I++RD RFH F++G+CSCGDFW
Sbjct: 560 NLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSCGDFW 604
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 175/366 (47%), Gaps = 34/366 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D + +N++ G+A S A ++ +L GL TFS++L +S + + G +
Sbjct: 94 DIILFNIMARGYARSNSPYLAFSLFGELLCSGLLP-DDYTFSSLLKACASSKALREGMGL 152
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +K G +++ L++MYA+ + A+ FDE+ + IV YN +
Sbjct: 153 HCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAI---------- 202
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
ITG ++ EA+ LFRE++ + T SV+ +C
Sbjct: 203 ---------------------ITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSC 241
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L AL+ GK IH ++ + V V +AL+DM+ KC S+ A S+F M ++ +W+
Sbjct: 242 ALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWS 301
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT-QFHGRSLV 303
AM+V + +G +A+ +F M+R G+ PD+ T ++ +C++ +E+G F+ S
Sbjct: 302 AMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKT 361
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKANETID 362
G+ I +V G+ G++++++ +++ ++ + W L+S + G
Sbjct: 362 YGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAKR 421
Query: 363 LFEKML 368
+ E++
Sbjct: 422 VIERIF 427
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 39/225 (17%)
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYG---KCGNIEDSHRLFNEM 336
S++S C SL E Q ++ T L S I+V L+ F ++ +H LF+++
Sbjct: 34 SLLSKCT---SLNELKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQI 90
Query: 337 NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR 396
+D + + + GYA+ LF ++L GL PD+ T +L AC+ + + +G
Sbjct: 91 LDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGM 150
Query: 397 --HYFEI-----------------------MVKEYGI-----RPIHDHYTCMIDILSRAG 426
H F + M G+ +P Y +I +R+
Sbjct: 151 GLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSS 210
Query: 427 RLEEAKSFINKMP---FPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
+ EA S ++ P + +++ SC + G +++GKW E
Sbjct: 211 QPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHE 255
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 248/689 (35%), Positives = 367/689 (53%), Gaps = 83/689 (12%)
Query: 3 FHDGVS----WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSS--RR 56
F G+S WN +I+ + +A+ VY L ++ F M+ S +
Sbjct: 82 FPSGLSPSAQWNFVITSYTKRNQPRNALNVY--------AQLRKMDFEVDNFMAPSVLKA 133
Query: 57 C-----VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMY 111
C LG++IHG +LK G VFVG+ L+ MY +
Sbjct: 134 CGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECAC------------------- 174
Query: 112 NTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLA 171
VE +R +F M ++D +SW+TMI L +N A++L REM +
Sbjct: 175 ------------VEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVR 222
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFV--GSALVDMYCKCKSIKYAE 229
+ S++ + GK +HA++IRN + +++ V +AL+DMY KC + A
Sbjct: 223 PSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLAR 282
Query: 230 SVFRTMAWKNVVSWTAMLVG-------------------------------YGQNGCSEE 258
+F + K VVSWTAM+ G Y Q C ++
Sbjct: 283 QLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQ 342
Query: 259 AVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVT 318
A +F M+ +G+ P T+ S++S CA +L+ G H + ++ ALV
Sbjct: 343 AFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVD 402
Query: 319 FYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVT 378
Y KCG+I + RLF E RD W A+++G+A G E +D+F +M G+KP+++T
Sbjct: 403 MYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDIT 462
Query: 379 LIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
IG+L ACS AGLV +G+ FE MV +G+ P +HY CM+D+L RAG L+EA I M
Sbjct: 463 FIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSM 522
Query: 439 PFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVS 498
P P+ I W L+++CR+H N ++G+ AA LLE++P N VL+S+IYA+ +W +
Sbjct: 523 PIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAA 582
Query: 499 QLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVP 558
+R+TM+ G++K+PG S I+ VH F D S P +I L ++ RK+ + GYVP
Sbjct: 583 GVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVP 642
Query: 559 DMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYIS 618
D S+VL +++ EK L +HSEKLA+AFGL+ P PIR+VKNLRVC+DCH ATK +S
Sbjct: 643 DTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLS 702
Query: 619 KITQREILVRDAVRFHLFKNGECSCGDFW 647
KI R I+VRD RFH F+ G CSCGD+W
Sbjct: 703 KIYGRVIIVRDRNRFHHFREGYCSCGDYW 731
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 144/330 (43%), Gaps = 32/330 (9%)
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L LE+ KQIHA II+ + + L D + + + W V++
Sbjct: 53 LSTLEQTKQIHAHIIKTHFHHALQI--PLND---------FPSGLSPSAQWNFVIT---- 97
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
Y + A+ ++ +++ E D+F SV+ +C ++ + G + HG L GL
Sbjct: 98 --SYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGL 155
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ V NAL+ YG+C +E + +F++M RD VSW+ ++ ++ + + ++L +
Sbjct: 156 DRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIRE 215
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY------TCMID 420
M ++P EV ++ +++ + + G+ + Y IR ++ + T ++D
Sbjct: 216 MNFMQVRPSEVAMVSMVNLFADTANMRMGK-----AMHAYVIRNSNNEHMGVPTTTALLD 270
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+ ++ G L A+ N + + W +++ C +E + +S D
Sbjct: 271 MYAKCGHLGLARQLFNGLT-QKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVM---I 326
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVR 510
+ + S YA D L MR GVR
Sbjct: 327 WTAMLSAYAQANCIDQAFNLFDQMRTSGVR 356
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/650 (36%), Positives = 362/650 (55%), Gaps = 40/650 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D + WN L++G ++A++ + M+ G T ++ L ++ + +
Sbjct: 175 VPSPDTILWNTLLAGLPG----SEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAM 230
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +HG+ +K G + V + L+ +Y+K G + A+ FD
Sbjct: 231 GRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDR------------------ 272
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
M + D +++ +I+G NG+ +++LF+E+ G + T +V
Sbjct: 273 -------------MDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAV 319
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ + +HAF+++ + V +AL +YC+ ++ A S+F M K +
Sbjct: 320 IPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTM 379
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
SW AM+ GY QNG +E AV +F MQ ++P+ T+ S +S+CA+L +L G H
Sbjct: 380 ESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRI 439
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
L + V AL+ Y KCG+I ++ +F+ M+ ++ VSW A++SGY G+ E
Sbjct: 440 ISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEA 499
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ L++ ML + P T + V+ ACS GLV++G+ F +M EY I P +H TCM+D
Sbjct: 500 LKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVD 559
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIG---WATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
+L RAG+L EA I++ FP AIG W LL +C +H N ++ K A++ L ELD N
Sbjct: 560 LLGRAGKLNEALELISE--FPQSAIGPGVWGALLGACMVHKNSDLAKLASQKLFELDSEN 617
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
YVLLS++Y SK + + +R+ + + + K PGC+ I+ R H+F A D P S
Sbjct: 618 AGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRPHVFMAGDHLHPQS 677
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
+ IY+ LE+L KMI+ GY P + L+DVE EK M+ HSEKLAIAFGLL PG
Sbjct: 678 EAIYSYLERLTAKMIEAGYQPVTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTE 737
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
IR++KNLRVC DCHNATK+ISK+TQR I+VRDA RFH F++G CSCGD+W
Sbjct: 738 IRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/462 (25%), Positives = 207/462 (44%), Gaps = 52/462 (11%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
R +HG + G+ + FV S L +Y KL DA++ FD +P + +++NT++ GL
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGL-- 190
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG-LAMDQFTFGS 179
EA++ F M G + D T S
Sbjct: 191 ---------------------------------PGSEALEAFVRMVDAGRVRPDSTTLAS 217
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
L A + G+ +H + ++ ++ V + L+ +Y KC + A+ +F M +
Sbjct: 218 SLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPD 277
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+V++ A++ GY NG E +V++F + +G P+ TL +VI + H
Sbjct: 278 LVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHA 337
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ L + VS AL T Y + ++E + +F+ M + SW A++SGYA+ G
Sbjct: 338 FVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEM 397
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ LF+ M ++P+ +T+ LSAC+ G + G+ I+ KE ++ T +I
Sbjct: 398 AVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYV-MTALI 456
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL-LELDPYN- 477
D+ ++ G + EA+S ++M + + W ++S +HG AE+L L D +
Sbjct: 457 DMYAKCGSIAEARSIFDRMD-NKNVVSWNAMISGYGLHGQ------GAEALKLYKDMLDA 509
Query: 478 ---PASYVLLSSIYASK--GKWDHVSQLRRTMREKGVRKDPG 514
P S LS IYA G D ++ R M + R PG
Sbjct: 510 RILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNE-YRITPG 550
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/474 (44%), Positives = 309/474 (65%), Gaps = 4/474 (0%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
+ S+L +C A++ GKQ+HA + + + + LV++YC C S+ A +F +
Sbjct: 78 YASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIP 137
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
N+ W ++ GY NG E AV+++ M G+ PD+FT V+ +CA L+++E G +
Sbjct: 138 KHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGRE 197
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV---SWTALVSGYAK 353
H + TG + V AL+ Y KCG + + +F+++ VRD V SW A+++GYA
Sbjct: 198 IHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMITGYAM 257
Query: 354 FGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
G A E +DLFE+M + KPD +T +GVLSACS GL+E+G +FE M+++Y I P
Sbjct: 258 HGHATEALDLFEEM-NRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQ 316
Query: 414 HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL 473
HYTCM+D+L +GRL+EA + I +M PD+ W LL+SC+IH NVE+G+ A E L+EL
Sbjct: 317 HYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIEL 376
Query: 474 DPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWS 533
+P + +YV+LS+IYA GKW+ V++LR+ M ++ ++K CSWI+ K++VH F + D S
Sbjct: 377 EPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTS 436
Query: 534 SPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIP 593
P SD+IY+ELE++ M + GY P SV HDVE EK M+ HSE+LAIAFGL+ P
Sbjct: 437 HPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTP 496
Query: 594 PGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
PG + + KNLR+C DCH A K+ISKIT+REI VRD R+H FK+G CSCGD+W
Sbjct: 497 PGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDYW 550
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 167/348 (47%), Gaps = 45/348 (12%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
++++L +R+ + G+Q+H + GFG + + LV++Y + A+ FD +P
Sbjct: 78 YASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIP 137
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
+ NI + W +I G NG A+ L+ +
Sbjct: 138 KHNIFL-------------------------------WNVLIRGYAWNGPYEAAVQLYYQ 166
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M GL D FTF VL AC L A+E G++IH +++ + +VFVG+AL+DMY KC
Sbjct: 167 MFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGC 226
Query: 225 IKYAESVFRTMAWKN---VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
+ A VF + ++ VVSW AM+ GY +G + EA+ +F M R +PD T V
Sbjct: 227 VGSAREVFDKILVRDAVLVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGV 285
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLISFITVSN--ALVTFYGKCGNIEDSHRLFNEMNV- 338
+S+C++ LEEG F +++ TV + +V G G +++++ L +M V
Sbjct: 286 LSACSHGGLLEEGWMFF-ETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVL 344
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSH--GLKPDEVTLIGVLS 384
D W AL++ K + ++L E L L+PD+ +LS
Sbjct: 345 PDSGVWGALLNS----CKIHANVELGEIALERLIELEPDDAGNYVILS 388
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 130/299 (43%), Gaps = 73/299 (24%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P H+ WN+LI G+A +G AV++Y M GL TF +L ++ ++
Sbjct: 136 IPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVP-DNFTFPFVLKACAALSAIEH 194
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKN---IVMYNTMITG 117
GR+IH H+++ G+ VFVG+ L+DMYAK G + A+ FD++ ++ +V +N MIT
Sbjct: 195 GREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMIT- 253
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
G +G EA+DLF EM D TF
Sbjct: 254 ------------------------------GYAMHGHATEALDLFEEMNRVA-KPDHITF 282
Query: 178 GSVLTAC--GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
VL+AC GGL LEEG +IR+ D
Sbjct: 283 VGVLSACSHGGL--LEEGWMFFETMIRDYKID---------------------------- 312
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
V +T M+ G +G +EA + M+ + PD G++++SC A++E G
Sbjct: 313 --PTVQHYTCMVDLLGHSGRLDEAYNLIMQMK---VLPDSGVWGALLNSCKIHANVELG 366
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 87/192 (45%), Gaps = 5/192 (2%)
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
+ P S++ SC +++ G Q H + + G ++ LV Y C ++ +
Sbjct: 71 LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130
Query: 331 RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
LF+ + + W L+ GYA G + L+ +M +GL PD T VL AC+
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALS 190
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDA---IGW 447
+E GR E +V+ + + +ID+ ++ G + A+ +K+ DA + W
Sbjct: 191 AIEHGREIHEHVVQTGWEKDVFVG-AALIDMYAKCGCVGSAREVFDKI-LVRDAVLVVSW 248
Query: 448 ATLLSSCRIHGN 459
+++ +HG+
Sbjct: 249 NAMITGYAMHGH 260
>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
Length = 960
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/644 (36%), Positives = 381/644 (59%), Gaps = 34/644 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+WN LI G+ + +A++ ++ M+ G + ++ ++++ S + G ++
Sbjct: 350 DVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKS-DEVSMTSIIAASGRLSNLLAGMEL 408
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +++K G+ S + VG+ L+DMY+K L T G
Sbjct: 409 HAYVIKHGWDSNLQVGNTLIDMYSKCNL--------------------TCYMG------- 441
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
R F M DKD ISWTT+I G QN EA++LFR++ + + +D+ GS+L A
Sbjct: 442 ----RAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRAS 497
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L ++ K+IH I+R D V + + LVD+Y KC+++ YA VF ++ K+VVSWT
Sbjct: 498 SVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWT 556
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
+M+ NG EAV++F M G+ D L ++S+ A+L++L +G + H L
Sbjct: 557 SMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRK 616
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G +++ A+V Y CG+++ + +F+ + + + +T++++ Y G ++LF
Sbjct: 617 GFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELF 676
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+KM + PD ++ + +L ACS AGL+++GR + +IM EY + P +HY C++D+L R
Sbjct: 677 DKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGR 736
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
A + EA F+ M P A W LL++CR H EIG+ AA+ LLEL+P NP + VL+
Sbjct: 737 ANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLV 796
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S+++A +G+W+ V ++R M+ G+ K PGCSWI+ +VH F+A D S P S +IY +L
Sbjct: 797 SNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKL 856
Query: 545 EKLNRKMIKE-GYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
++ RK+ +E GYV D VLH+V+ EK++ML+ HSE++AIA+GLL P +R+ KN
Sbjct: 857 SEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKN 916
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LRVC DCH K +SK+ +R+I++RDA RFH F++G CSCGD W
Sbjct: 917 LRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 143/517 (27%), Positives = 247/517 (47%), Gaps = 71/517 (13%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V WN ++S +++ G + ++++ M G S T + L LG++I
Sbjct: 248 DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNS-YTIVSALTACDGFSYAKLGKEI 306
Query: 65 HGHILKFG-FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
H +LK S ++V + L+ MY + G ++P+
Sbjct: 307 HASVLKSSTHSSELYVCNALIAMYTRCG----------KMPQ------------------ 338
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
+ R+ R M + D ++W ++I G +QN + +EA++ F +M G D+ + S++ A
Sbjct: 339 ---AERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
G L L G ++HA++I++ N+ VG+ L+DMY KC Y F M K+++SW
Sbjct: 396 SGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISW 455
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
T ++ GY QN C EA+++F ++ + +E D+ LGS++ + + L S+ + H L
Sbjct: 456 TTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILR 515
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
GL+ + + N LV YGKC N+ + R+F + +D VSWT+++S A G +E ++L
Sbjct: 516 KGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVEL 574
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH-YFEIMVKEYGIR-----PIHDHYTC 417
F +M+ GL D V L+ +LSA + + KGR + ++ K + + + D Y C
Sbjct: 575 FRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYAC 634
Query: 418 ---------MIDILSRAGRLE---------------EAKSFINKM---PFPPDAIGWATL 450
+ D + R G L+ A +KM PD I + L
Sbjct: 635 CGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLAL 694
Query: 451 LSSCRIHGNVEIGKW---AAESLLELDPYNPASYVLL 484
L +C G ++ G+ E EL+P+ P YV L
Sbjct: 695 LYACSHAGLLDEGRGFLKIMEHEYELEPW-PEHYVCL 730
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 134/482 (27%), Positives = 239/482 (49%), Gaps = 45/482 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP +WN +I + S+G A+ +Y M +G+ L +F +L + R +
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVP-LGLSSFPALLKACAKLRDIRS 200
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEK-NIVMYNTMITGLL 119
G ++H ++K G+ S F+ + LV MYAK + A+R FD EK + V++N++++
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILS--- 257
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
S++T +G E ++LFREM + G A + +T S
Sbjct: 258 ---------------------SYST-------SGKSLETLELFREMHMTGPAPNSYTIVS 289
Query: 180 VLTACGGLLALEEGKQIHAFIIRND-HKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
LTAC G + GK+IHA ++++ H ++V +AL+ MY +C + AE + R M
Sbjct: 290 ALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNA 349
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+VV+W +++ GY QN +EA++ F +M G + D+ ++ S+I++ L++L G + H
Sbjct: 350 DVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELH 409
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
+ G S + V N L+ Y KC R F M+ +D +SWT +++GYA+
Sbjct: 410 AYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHV 469
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACS--RAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
E ++LF + ++ DE+ L +L A S ++ L+ K H I+ K I +
Sbjct: 470 EALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIH-CHILRKGLLDTVIQNE-- 526
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN----VEIGKWAAESLLE 472
++D+ + + A + D + W +++SS ++GN VE+ + E+ L
Sbjct: 527 -LVDVYGKCRNMGYATRVFESIK-GKDVVSWTSMISSSALNGNESEAVELFRRMVETGLS 584
Query: 473 LD 474
D
Sbjct: 585 AD 586
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 152/609 (24%), Positives = 271/609 (44%), Gaps = 62/609 (10%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYV--FVGSPLVDMYAKLGLIYDAKRGFD 101
F+ +L + RR V GRQ+H I K F S+ F+ LV MY K G + DA++ FD
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFK-TFPSFELDFLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 102 ELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDL 161
E+P D+ + +W TMI + NG A+ L
Sbjct: 141 EMP-------------------------------DRTAFAWNTMIGAYVSNGEPASALAL 169
Query: 162 FREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK 221
+ MR+EG+ + +F ++L AC L + G ++H+ +++ + F+ +ALV MY K
Sbjct: 170 YWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAK 229
Query: 222 CKSIKYAESVFRTMAWK-NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGS 280
+ A +F K + V W ++L Y +G S E +++F M G P+ +T+ S
Sbjct: 230 NDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVS 289
Query: 281 VISSCANLASLEEGTQFHGRSLVTGL-ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
+++C + + G + H L + S + V NAL+ Y +CG + + R+ +MN
Sbjct: 290 ALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNA 349
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
D V+W +L+ GY + E ++ F M++ G K DEV++ +++A R + G
Sbjct: 350 DVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELH 409
Query: 400 EIMVKEYGIRPIHDHYTCMIDILSRAG-RLEEAKSFINKMPFPPDAIGWATLLS-----S 453
++K +G +ID+ S+ ++F+ D I W T+++
Sbjct: 410 AYVIK-HGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRM--HDKDLISWTTVIAGYAQND 466
Query: 454 CRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASK--GKWDHVSQLRRTMREKGVRK 511
C + +E+ + A+ +E+D S + SS+ S K H LR+ + + ++
Sbjct: 467 CHVEA-LELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQN 525
Query: 512 D-----PGCSWIKYKSRV--HIFSAD--DWSSPYSDQIY----AELEKLNRKMIKEGYVP 558
+ C + Y +RV I D W+S S +E +L R+M++ G
Sbjct: 526 ELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSA 585
Query: 559 DMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG-LPIRVVKNLRVCSDCHNATKYI 617
D ++L + + + LN E F G + + VV C D +A
Sbjct: 586 DSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVF 645
Query: 618 SKITQREIL 626
+I ++ +L
Sbjct: 646 DRIERKGLL 654
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 246/681 (36%), Positives = 370/681 (54%), Gaps = 63/681 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + SWN+LI A+ +V V+ ML D ++ TF ++ + RRC +
Sbjct: 199 IPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLV 258
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +HG +K FG VFV + L+ YA G + A F+ MI G
Sbjct: 259 GKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFE------------MIEG--- 303
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+KD +SW +M+TG +Q G +A+DLF MR EG+ + T SV
Sbjct: 304 --------------NNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSV 349
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
++AC + L G+++ +I RN+ N+ V +A +DM+ KC ++ A +F M ++V
Sbjct: 350 MSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDV 409
Query: 241 VSWTAMLVGYG-------------------------------QNGCSEEAVKIFCNMQ-- 267
VSWT ++ GY Q+G +EA+ IF +Q
Sbjct: 410 VSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLT 469
Query: 268 RNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIE 327
++G PD TL S +S+CA L +++ G HG + ++ +L+ Y K G++E
Sbjct: 470 KSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVE 529
Query: 328 DSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS 387
+ +F+ + +D W+A+++G A G+ I+LF M +KP+ VT +L ACS
Sbjct: 530 KAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACS 589
Query: 388 RAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGW 447
+GLV++G+ F+ M + YG+ P HY+CM+D+L RAG LEEA FI MP P A W
Sbjct: 590 HSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVW 649
Query: 448 ATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREK 507
LL +C IHGN+E+ + A LLE++P N +YVLLS++YA G W+ VS+LR+ MR+
Sbjct: 650 GALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDS 709
Query: 508 GVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDV 567
G++K+ GCS I+ VH F D + P S IYA+L+++ ++ GYV + +L V
Sbjct: 710 GLKKETGCSSIEIDGTVHEFIVGDNAHPLSRDIYAKLDEIMARLRSHGYVANTLCMLQFV 769
Query: 568 ELSE-KIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREIL 626
E E K K L HSEK+AIAFGL+ IR+VKNLRVC DCH K +SK+ R+I+
Sbjct: 770 EEEEMKEKALKLHSEKMAIAFGLIRADSQQAIRIVKNLRVCRDCHTVAKMVSKVYGRDIV 829
Query: 627 VRDAVRFHLFKNGECSCGDFW 647
+RD RFH F G CSC D+W
Sbjct: 830 LRDRYRFHHFSGGHCSCQDYW 850
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 180/389 (46%), Gaps = 19/389 (4%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSAL--VDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+ ++ KQIHA ++R + + + S L + ++ YA VF + N+ SW +
Sbjct: 151 SFKQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNIL 210
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
+ + ++V +F M + P+ FT +I + A G HG ++ T
Sbjct: 211 IRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTS 270
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFN--EMNVRDEVSWTALVSGYAKFGKANETIDL 363
+ V N+L+ FY CG+++ ++ +F E N +D VSW ++V+G+ + G ++ +DL
Sbjct: 271 FGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDL 330
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
FE+M + G+ P+ VT++ V+SAC++ + GR + + + + + + ID+
Sbjct: 331 FERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNL-NVCNATIDMFV 389
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
+ G +E A+ + M D + W T++ I + +S+ D PA VL
Sbjct: 390 KCGEVEIARGLFDNME-KRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDI--PAWNVL 446
Query: 484 LSSIYASKGKWDHVSQLRRTMR--EKGVRKDPGC--SWIKYKSRVHIFSADDWSSPYSDQ 539
+S Y G+ + R ++ + G R D S + +++ +W Y
Sbjct: 447 ISG-YEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGY--- 502
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVE 568
I E +LNR + + DM S DVE
Sbjct: 503 IKKERIQLNRNLATS--LIDMYSKSGDVE 529
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/621 (37%), Positives = 352/621 (56%), Gaps = 64/621 (10%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+Q+H HI++ G +V + L+ M K+ D G Y ++ G +
Sbjct: 59 KQVHAHIIRNGLSQCSYVLTKLIRMLTKV----DVPMG----------SYPLLVFGQVNY 104
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
+ WT MI G GL E+ + + MR +G+ FTF ++
Sbjct: 105 ---------------PNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALF 149
Query: 182 TACGGLLALEEGKQIHA-FIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
ACG L ++ GKQ+HA I+ +++VG++++D+Y KC + A VF M+ ++V
Sbjct: 150 KACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDV 209
Query: 241 VSWT-------------------------------AMLVGYGQNGCSEEAVKIFCNMQRN 269
VSWT AM+ GY QNG +EA++ F MQ
Sbjct: 210 VSWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDV 269
Query: 270 GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL--ISFITVSNALVTFYGKCGNIE 327
G+E D+ TL VIS+CA L +++ + +G + V +AL+ Y KCG+ +
Sbjct: 270 GMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPD 329
Query: 328 DSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS 387
+++++F M R+ S+++++ GYA G+A+ + LF ML ++P++VT IG+LSACS
Sbjct: 330 EAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACS 389
Query: 388 RAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGW 447
AGLVE+GR F M K +G+ P DHY CM+D+L RAG LEEA + MP P+ W
Sbjct: 390 HAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVW 449
Query: 448 ATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREK 507
LL +CRIHGN +I + AA L +L+P +Y+LLS+IYAS G+W+ VS+LR+ +REK
Sbjct: 450 GALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREK 509
Query: 508 GVRKDPGCSWIKYKS-RVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHD 566
G +K+PGCSW + K+ +H F A D + P S +I L++L ++ GY P++ S +D
Sbjct: 510 GFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYD 569
Query: 567 VELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREIL 626
+ EK ++L HSEKLA+A+GLL G I+++KN+R+C DCHN S+IT REI+
Sbjct: 570 LTDDEKERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREII 629
Query: 627 VRDAVRFHLFKNGECSCGDFW 647
VRD +RFH F NG CSCG+FW
Sbjct: 630 VRDNMRFHHFHNGTCSCGNFW 650
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 193/350 (55%), Gaps = 16/350 (4%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH- 67
W +I G+A G ++++ Y M +DG+G +S TFS + + +DLG+Q+H
Sbjct: 110 WTAMIRGYALQGLLSESTNFYTRMRRDGVGPVS-FTFSALFKACGAALNMDLGKQVHAQT 168
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
IL GF S ++VG+ ++D+Y K G + A++ FDE+ E+++V + +I + G +E +
Sbjct: 169 ILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESA 228
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
LF + KD ++WT M+TG QNG +EA++ F++M+ G+ D+ T V++AC L
Sbjct: 229 SGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQL 288
Query: 188 LALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
A++ I R+ NV VGSAL+DMY KC S A VF M +NV S+++
Sbjct: 289 GAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSS 348
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
M++GY +G + A+++F +M + I P+ T ++S+C++ +E+ GR L
Sbjct: 349 MILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQ-----GRQLFAK 403
Query: 306 LISFITVSNA------LVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALV 348
+ F V+ + +V G+ G +E++ L M + W AL+
Sbjct: 404 MEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALL 453
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 157/401 (39%), Gaps = 99/401 (24%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D V+W +++G+A +G +A++ + M G+ +T + ++ C L
Sbjct: 235 LPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGM-ETDEVTLAGVI-----SACAQL 288
Query: 61 GRQIHGHILK-------FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNT 113
G H + ++ FG V VGS L+DMY+K G +A + F+ + E+N+ Y++
Sbjct: 289 GAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSS 348
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
M I G +G A+ LF +M + +
Sbjct: 349 M-------------------------------ILGYAMHGRAHSALQLFHDMLKTEIRPN 377
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
+ TF +L+AC +E+G+Q+ A K F G A + C
Sbjct: 378 KVTFIGILSACSHAGLVEQGRQLFA-------KMEKFFGVAPSPDHYAC----------- 419
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC-----ANL 288
M+ G+ GC EEA+ + M +EP+ G+++ +C ++
Sbjct: 420 ------------MVDLLGRAGCLEEALDLVKTMP---MEPNGGVWGALLGACRIHGNPDI 464
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE--VSWTA 346
A + F + G+ ++I +SN + G+ + ++ E + SW
Sbjct: 465 AQIAANELF--KLEPNGIGNYILLSNIYAS-AGRWEEVSKLRKVIREKGFKKNPGCSWFE 521
Query: 347 LVSGYAKFGKANETI------------DLFEKMLSHGLKPD 375
+G A +T L E++ SHG KP+
Sbjct: 522 GKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPN 562
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/599 (39%), Positives = 342/599 (57%), Gaps = 70/599 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SWN +I+G A H +A+ + M +D L+ +F + L S + + L
Sbjct: 116 MPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDF-VLNDYSFGSGLSACSRLKDLKL 174
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G QIHG I K + VF+GS L+D Y+K GL+ A
Sbjct: 175 GAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCA------------------------ 210
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
RR+F GM++K+ +SW +IT QNG EA++ F M G D+ T SV
Sbjct: 211 -------RRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASV 263
Query: 181 LTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKC----------------- 222
++AC L A +EG QIHA ++++D ++++ +G+ALVDMY KC
Sbjct: 264 VSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRN 323
Query: 223 --------------KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR 268
S+K A S+F T+ K++VSW A++ GY QNG +EEA+ +F ++R
Sbjct: 324 AVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKR 383
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFH------GRSLVTGLISFITVSNALVTFYGK 322
+ P +T G+++++ ANLA LE G Q H G +G I V N+L+ Y K
Sbjct: 384 ESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMK 443
Query: 323 CGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGV 382
CG++E+ R+F M +D VSW ++ GYA+ G E ++LF+KML G KPD VT+IG
Sbjct: 444 CGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGT 503
Query: 383 LSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPP 442
L ACS AGLVE+GR YF M KE+G+ P+ DHYTCM+D+L RAG LEEAK I MP P
Sbjct: 504 LCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQP 563
Query: 443 DAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRR 502
DA+ W++LLS+C++H N+ +GK+ AE + E+DP + YVLL+++Y+ G+W +R+
Sbjct: 564 DAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRK 623
Query: 503 TMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMS 561
MR +GV K PGCSWI +S VH+F D P +IY+ L+ L + M + GYVPD S
Sbjct: 624 LMRRRGVVKQPGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILKLLTKHMRQAGYVPDAS 682
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 155/478 (32%), Positives = 251/478 (52%), Gaps = 18/478 (3%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
F+ +L + R R +HG +++ F VF+ + L+D+Y K G + A++ FD +
Sbjct: 27 FAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMS 86
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
E+N+ +N++I+ L+R G V+ES LF M +KD SW +MI G Q+ EA+D F
Sbjct: 87 ERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVR 146
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M + ++ ++FGS L+AC L L+ G QIH I ++ + +VF+GS L+D Y KC
Sbjct: 147 MHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGL 206
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A VF M KNVVSW ++ Y QNG + EA++ F M G +PD+ TL SV+S+
Sbjct: 207 VGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSA 266
Query: 285 CANLASLEEGTQFHGRSLVTG-LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
CA LA+ +EG Q H R + + + + + NALV Y KCG + ++ +F+ M VR+ VS
Sbjct: 267 CATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVS 326
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
T +VSGYAK +F + + D V+ +++ ++ G E+ F M+
Sbjct: 327 ETTMVSGYAKSASVKAARSMFATI----KQKDIVSWNALIAGYTQNGENEEALGLFR-ML 381
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLE---EAKSFINKMPF------PPDAIGWATLLSSC 454
K + P H + +++ + LE +A S + K F PD +L+
Sbjct: 382 KRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMY 441
Query: 455 RIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKD 512
G+VE G E+++E D + + ++ YA G +L + M E G + D
Sbjct: 442 MKCGSVEEGLRVFENMVEKDHVSWNTMII---GYAQNGYGMEALELFQKMLESGEKPD 496
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 174/369 (47%), Gaps = 37/369 (10%)
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
D F +L C L + + + +H +I+ + VF+ + L+D+Y KC + YA VF
Sbjct: 23 DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82
Query: 233 RTMAWKNV-------------------------------VSWTAMLVGYGQNGCSEEAVK 261
M+ +NV SW +M+ G+ Q+ EEA+
Sbjct: 83 DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142
Query: 262 IFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYG 321
F M R+ +D++ GS +S+C+ L L+ G Q HG + + + + L+ FY
Sbjct: 143 WFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYS 202
Query: 322 KCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIG 381
KCG + + R+F+ M ++ VSW L++ Y + G A E ++ F +M G KPDEVTL
Sbjct: 203 KCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLAS 262
Query: 382 VLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFP 441
V+SAC+ ++G +VK R ++D+ ++ GR+ EA+ ++MP
Sbjct: 263 VVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPV- 321
Query: 442 PDAIGWATLLSSCRIHGNVEIGKWAAESLLE-LDPYNPASYVLLSSIYASKGKWDHVSQL 500
+A+ T++S +V+ AA S+ + + S+ L + Y G+ + L
Sbjct: 322 RNAVSETTMVSGYAKSASVK----AARSMFATIKQKDIVSWNALIAGYTQNGENEEALGL 377
Query: 501 RRTMREKGV 509
R ++ + V
Sbjct: 378 FRMLKRESV 386
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/621 (37%), Positives = 352/621 (56%), Gaps = 64/621 (10%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+Q+H HI++ G +V + L+ M K+ D G Y ++ G +
Sbjct: 59 KQVHAHIIRNGLSQCSYVLTKLIRMLTKV----DVPMG----------SYPLLVFGQVNY 104
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
+ WT MI G GL E+ + + MR +G+ FTF ++
Sbjct: 105 ---------------PNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALF 149
Query: 182 TACGGLLALEEGKQIHA-FIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
ACG L ++ GKQ+HA I+ +++VG++++D+Y KC + A VF M+ ++V
Sbjct: 150 KACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDV 209
Query: 241 VSWT-------------------------------AMLVGYGQNGCSEEAVKIFCNMQRN 269
VSWT AM+ GY QNG +EA++ F MQ
Sbjct: 210 VSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDV 269
Query: 270 GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL--ISFITVSNALVTFYGKCGNIE 327
G+E D+ TL VIS+CA L +++ + +G + V +AL+ Y KCG+ +
Sbjct: 270 GMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPD 329
Query: 328 DSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS 387
+++++F M R+ S+++++ GYA G+A+ + LF ML ++P++VT IG+LSACS
Sbjct: 330 EAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACS 389
Query: 388 RAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGW 447
AGLVE+GR F M K +G+ P DHY CM+D+L RAG LEEA + MP P+ W
Sbjct: 390 HAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVW 449
Query: 448 ATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREK 507
LL +CRIHGN +I + AA L +L+P +Y+LLS+IYAS G+W+ VS+LR+ +REK
Sbjct: 450 GALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREK 509
Query: 508 GVRKDPGCSWIKYKS-RVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHD 566
G +K+PGCSW + K+ +H F A D + P S +I L++L ++ GY P++ S +D
Sbjct: 510 GFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYD 569
Query: 567 VELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREIL 626
+ EK ++L HSEKLA+A+GLL G I+++KN+R+C DCHN S+IT REI+
Sbjct: 570 LTDDEKERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREII 629
Query: 627 VRDAVRFHLFKNGECSCGDFW 647
VRD +RFH F NG CSCG+FW
Sbjct: 630 VRDNMRFHHFHNGTCSCGNFW 650
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 193/350 (55%), Gaps = 16/350 (4%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH- 67
W +I G+A G ++++ Y M +DG+G +S TFS + + +DLG+Q+H
Sbjct: 110 WTAMIRGYALQGLLSESTNFYTRMRRDGVGPVS-FTFSALFKACGAALNMDLGKQVHAQT 168
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
IL GF S ++VG+ ++D+Y K G + A++ FDE+ E+++V + +I + G +E +
Sbjct: 169 ILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESA 228
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
LF + KD ++WT M+TG QNG +EA++ F++M+ G+ D+ T V++AC L
Sbjct: 229 SGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQL 288
Query: 188 LALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
A++ I R+ NV VGSAL+DMY KC S A VF M +NV S+++
Sbjct: 289 GAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSS 348
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
M++GY +G + A+++F +M + I P+ T ++S+C++ +E+ GR L
Sbjct: 349 MILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQ-----GRQLFAK 403
Query: 306 LISFITVSNA------LVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALV 348
+ F V+ + +V G+ G +E++ L M + W AL+
Sbjct: 404 MEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALL 453
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 157/404 (38%), Gaps = 105/404 (25%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D V+W +++G+A +G +A++ + M G+ +T + ++ C L
Sbjct: 235 LPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGM-ETDEVTLAGVI-----SACAQL 288
Query: 61 GRQIHGHILK-------FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNT 113
G H + ++ FG V VGS L+DMY+K G +A + F+ + E+N+ Y++
Sbjct: 289 GAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSS 348
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
M I G +G A+ LF +M + +
Sbjct: 349 M-------------------------------ILGYAMHGRAHSALQLFHDMLKTEIRPN 377
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
+ TF +L+AC +E+G+Q+ A K F G A + C
Sbjct: 378 KVTFIGILSACSHAGLVEQGRQLFA-------KMEKFFGVAPSPDHYAC----------- 419
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC-----ANL 288
M+ G+ GC EEA+ + M +EP+ G+++ +C ++
Sbjct: 420 ------------MVDLLGRAGCLEEALDLVKTMP---MEPNGGVWGALLGACRIHGNPDI 464
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRL---FNEMNVRDE--VS 343
A + F + G+ ++I +SN Y G E+ +L E + S
Sbjct: 465 AQIAANELF--KLEPNGIGNYILLSN----IYASAGRWEEVSKLRKVIREKGFKKNPGCS 518
Query: 344 WTALVSGYAKFGKANETI------------DLFEKMLSHGLKPD 375
W +G A +T L E++ SHG KP+
Sbjct: 519 WFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPN 562
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 238/628 (37%), Positives = 343/628 (54%), Gaps = 34/628 (5%)
Query: 22 VNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL--GRQIHGHILKFGFGSYVFV 79
+ A+ ++ L + L N S +T L S+SR L G Q+H LK + V
Sbjct: 505 TSSALHLHALRVHCLLPNPSHLTIPIAL-KSASRLPHPLRAGEQLHARSLKLPSHTNPHV 563
Query: 80 GSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDS 139
+ L+ +YAK GL++ A+R FDE M +
Sbjct: 564 LTSLLSLYAKCGLLHRAQRVFDE-------------------------------MPHPST 592
Query: 140 ISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAF 199
+ WT +IT M G REA+ + R G+ D FT VLTAC + L G+ +
Sbjct: 593 VPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRA 652
Query: 200 IIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEA 259
+ +VFV +A VD+Y KC + A VF M K+ V+W AM+ GY NG EA
Sbjct: 653 AEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREA 712
Query: 260 VKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTF 319
+ +F MQ G++PD + + +S+C L +L+ G Q + + AL+
Sbjct: 713 LDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDM 772
Query: 320 YGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTL 379
Y KCG+ ++ +F +M +D + W A++ G G L +M G+K ++ T
Sbjct: 773 YAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTF 832
Query: 380 IGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP 439
IG+L +C+ GL++ GR YF M K Y I P +HY CM+D+LSRAG L+EA ++ MP
Sbjct: 833 IGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMP 892
Query: 440 FPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQ 499
P +A+ LL C+IH N E+ + + L+ L+P+N +YV+LS+IY+++G+W+ ++
Sbjct: 893 MPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAK 952
Query: 500 LRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPD 559
LR M+ KGV K P CSW++++ +VH F D S P SDQIY +L++L +M GY P
Sbjct: 953 LRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPT 1012
Query: 560 MSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISK 619
V+ DVE EK L HHSEKLAIAF LL PG IRV KNLRVCSDCH A K +S+
Sbjct: 1013 TEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSR 1072
Query: 620 ITQREILVRDAVRFHLFKNGECSCGDFW 647
IT REI+VRD RFH F++G CSC D+W
Sbjct: 1073 ITHREIIVRDNNRFHCFRDGSCSCNDYW 1100
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 160/339 (47%), Gaps = 37/339 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP V W LI+ + G + +AV V +G+ S F+ + ++++ R DL
Sbjct: 587 MPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDS---FTAVRVLTACARIADL 643
Query: 61 --GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G + + G VFV + VD+Y K G + A+ FD++ K+ V + M
Sbjct: 644 ATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAM---- 699
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+ G NG REA+DLF M+ EG+ D +
Sbjct: 700 ---------------------------VGGYASNGHPREALDLFLAMQAEGMKPDCYAVA 732
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
L+AC L AL+ G+Q + ++ DN +G+AL+DMY KC S A VF+ M K
Sbjct: 733 GALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKK 792
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-F 297
+++ W AM++G G G + A + M+++G++ +D T ++ SC + +++G + F
Sbjct: 793 DIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYF 852
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
H + + + I +V + G ++++H+L ++M
Sbjct: 853 HNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDM 891
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 96/226 (42%), Gaps = 48/226 (21%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRR--CV 58
M D V+W ++ G+AS+G +A+ ++ M +G+ ++ +S+ R +
Sbjct: 688 MRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGM---KPDCYAVAGALSACTRLGAL 744
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
DLGRQ + F +G+ L+DMYAK G +A F ++ +K+I+++N MI GL
Sbjct: 745 DLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGL 804
Query: 119 -----------------------------------LRRGLVEESRRLFRGMKDKDSIS-- 141
GL+++ RR F M IS
Sbjct: 805 GMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPR 864
Query: 142 ---WTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ M+ L + GL +EA L +M + A+ G++L C
Sbjct: 865 IEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAV---ILGALLGGC 907
>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
Length = 645
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/605 (38%), Positives = 339/605 (56%), Gaps = 32/605 (5%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
++T+L R V GRQ+H +L G G + + LVD+YA G + A+R FDE+P
Sbjct: 71 YATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVFDEMP 130
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
+ V W +I ++G AI+L+R
Sbjct: 131 NQGNVFL------------------------------WNVLIRAYARDGPCEAAIELYRA 160
Query: 165 MRLEG-LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
M G + D FT+ VL AC LL L G+++H ++R + +VFV + L+DMY KC
Sbjct: 161 MLAYGSMKPDNFTYPPVLKACAALLDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCG 220
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
+ A +VF ++ W +M+ GQNG EA+ + NM GI P TL S IS
Sbjct: 221 CMDEAWAVFNDTTIRDAAVWNSMIAACGQNGRPAEALTLCRNMAAEGIAPTIATLVSAIS 280
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+ A ++L G + HG G S + +L+ Y K G + +H LF ++ R+ +S
Sbjct: 281 AAAVASALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELIS 340
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
W A++ G+ G A+ +LF +M S + PD +T +GVLSAC+ G+V++ + F++M
Sbjct: 341 WNAMICGFGMHGHADHAFELFSRMRSEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLM 400
Query: 403 VKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
V Y I+P HYTC++D+L +GR +EA I M PD+ W LL+ C+IH NVE+
Sbjct: 401 VTVYSIKPTVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVEL 460
Query: 463 GKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKS 522
+ A + L+EL+P + +YVLLS+IYA GKW+ +++R+ M +G++K CSWI+ K
Sbjct: 461 AELALQKLIELEPEDAGNYVLLSNIYAESGKWEEAARVRKLMTNRGLKKIIACSWIELKG 520
Query: 523 RVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEK 582
+ H F D S P SD IY ELE+L + + GYVPD + V H+VE EK M+ HSE+
Sbjct: 521 KFHGFLVGDASHPRSDDIYEELERLEGLISQTGYVPDTTPVFHNVEDDEKRNMVWGHSER 580
Query: 583 LAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECS 642
LAIAFGL+ PP + V KNLRVC DCH K IS+I QREI++RD R+H F NGECS
Sbjct: 581 LAIAFGLISTPPRTKLLVTKNLRVCEDCHVVIKLISQIEQREIIIRDVNRYHHFVNGECS 640
Query: 643 CGDFW 647
C D W
Sbjct: 641 CKDHW 645
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 171/372 (45%), Gaps = 38/372 (10%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN+LI +A G A+++Y ML G T+ +L ++ + GR++H +
Sbjct: 138 WNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLSAGREVHDRV 197
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
++ + + VFV + L+DMYAK G + +A F++ ++ ++N+M
Sbjct: 198 MRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSM-------------- 243
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
I QNG EA+ L R M EG+A T S ++A
Sbjct: 244 -----------------IAACGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVAS 286
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
AL G+++H + R + ++L+DMY K + A +F + + ++SW AM+
Sbjct: 287 ALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMIC 346
Query: 249 GYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQ-FHGRSLVTGL 306
G+G +G ++ A ++F M+ + PD T V+S+C + ++E + F V +
Sbjct: 347 GFGMHGHADHAFELFSRMRSEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSI 406
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKANETIDL-F 364
+ LV G G +++ + M V+ D W AL++G K K E +L
Sbjct: 407 KPTVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNG-CKIHKNVELAELAL 465
Query: 365 EKMLSHGLKPDE 376
+K++ L+P++
Sbjct: 466 QKLIE--LEPED 475
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 108/254 (42%), Gaps = 40/254 (15%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D WN +I+ +G +A+ + M +G+ + T + + ++ + GR++
Sbjct: 236 DAAVWNSMIAACGQNGRPAEALTLCRNMAAEGIAP-TIATLVSAISAAAVASALPRGREL 294
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG+ + GFGS + + L+DMYAK G + A F++L + ++ +N MI G
Sbjct: 295 HGYGWRRGFGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGF------ 348
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM-DQFTFGSVLTA 183
GM +G A +LF MR E M D TF VL+A
Sbjct: 349 --------GM-----------------HGHADHAFELFSRMRSEAQVMPDHITFVGVLSA 383
Query: 184 CGGLLALEEGKQIHAFIIR-NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK-NVV 241
C ++E K++ ++ K V + LVD+ K A V + M K +
Sbjct: 384 CNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSG 443
Query: 242 SWTAMLVGYGQNGC 255
W A+L NGC
Sbjct: 444 IWGALL-----NGC 452
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/552 (40%), Positives = 330/552 (59%), Gaps = 31/552 (5%)
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
++ +F+ + + W T + + +AI LF +R ++ D +T VL AC
Sbjct: 66 AKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSR 125
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM------AW--- 237
LL + GK +H ++ + + N+F+ + +V +Y C I A VF M W
Sbjct: 126 LLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIM 185
Query: 238 ----------------------KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDD 275
+NV SWT+M+ GY Q G S+EA+ +F M+ G+ P++
Sbjct: 186 IARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNE 245
Query: 276 FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNE 335
T+ +V+ +CA++ +L G + H S +G I V N L+ Y KCG +ED+ R+F+
Sbjct: 246 VTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDN 305
Query: 336 MNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG 395
M R VSW+A+++G A G+A + + LF KM++ G+KP+ VT IG+L ACS G+VEKG
Sbjct: 306 MEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKG 365
Query: 396 RHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCR 455
R YF M ++YGI P +HY CM+D+ SRAG L+EA FI MP P+ + W LL C+
Sbjct: 366 RKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCK 425
Query: 456 IHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGC 515
+H N+++ + A L +LDP N YV+LS+IYA G+W+ V+++R+ MR++GV+K PG
Sbjct: 426 VHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGW 485
Query: 516 SWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKM 575
S I + V+ F A D + P +++I+ EKL ++M +GYVP+ S VL D+E +K K
Sbjct: 486 SSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEKF 545
Query: 576 LNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHL 635
L HSEKLA+ FGL+ PG IR++KNLRVC DCH A K IS ++ REI+VRD RFH
Sbjct: 546 LYRHSEKLAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRFHC 605
Query: 636 FKNGECSCGDFW 647
FKNG CSCGD+W
Sbjct: 606 FKNGSCSCGDYW 617
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 206/374 (55%), Gaps = 11/374 (2%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL--GRQIHG 66
WN + A S DA+ ++ + + ++S ++ ++ + R +D+ G+ +HG
Sbjct: 81 WNTCLRSFAEGDSPADAISLFYRLRE---FDISPDHYTCSFVLKACSRLLDVRNGKIVHG 137
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++ K G S +F+ + +V +YA G I A++ FD++P+++++ +N MI L++ G E
Sbjct: 138 YVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEG 197
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+ +LF M +++ SWT+MI G Q G +EAIDLF EM GL ++ T +VL AC
Sbjct: 198 AYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACAD 257
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+ L G++IH F R+ ++ N+ V + L+DMY KC ++ A +F M + VVSW+AM
Sbjct: 258 MGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAM 317
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHGRSLVTG 305
+ G +G +E+A+ +F M G++P+ T ++ +C+++ +E+G + F + G
Sbjct: 318 IAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYG 377
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKANETIDLF 364
++ I +V + + G ++++H M + + V W AL+ G K ++ I L
Sbjct: 378 IVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGG----CKVHKNIKLA 433
Query: 365 EKMLSHGLKPDEVT 378
E+ H K D +
Sbjct: 434 EEATRHLSKLDPLN 447
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 136/304 (44%), Gaps = 39/304 (12%)
Query: 192 EGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYG 251
E KQ+HA +++ + + S + + S YA+ +F+ + V W L +
Sbjct: 30 ELKQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFA 89
Query: 252 QNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFIT 311
+ +A+ +F ++ I PD +T V+ +C+ L + G HG GL S +
Sbjct: 90 EGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMF 149
Query: 312 VSNALVTFYGKCGNI-------------------------------EDSHRLFNEMNVRD 340
+ N +V Y CG I E +++LF EM R+
Sbjct: 150 LQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERN 209
Query: 341 EVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
SWT+++ GYA+ GK+ E IDLF +M GL P+EVT++ VL AC+ G + GR +
Sbjct: 210 VRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHD 269
Query: 401 IMVK---EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIH 457
+ E IR + +ID+ + G LE+A + M + W+ +++ H
Sbjct: 270 FSNRSGYEKNIRVCNT----LIDMYVKCGCLEDACRIFDNME-ERTVVSWSAMIAGLAAH 324
Query: 458 GNVE 461
G E
Sbjct: 325 GRAE 328
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 152/384 (39%), Gaps = 84/384 (21%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + SW +I G+A G +A+ ++ M GL + +T +L+ + + L
Sbjct: 205 MPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLP-NEVTVVAVLVACADMGNLVL 263
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR+IH + G+ + V + L+DMY K G + DA R FD + E+ +V ++ MI GL
Sbjct: 264 GRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAA 323
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G E +A+ LF +M G+ + TF +
Sbjct: 324 HGRAE-------------------------------DALALFNKMINTGVKPNAVTFIGI 352
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC + +E+G++ A + R+ Y I++
Sbjct: 353 LHACSHMGMVEKGRKYFASMTRD---------------YGIVPRIEH------------- 384
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC---ANLASLEEGTQF 297
+ M+ + + G +EA + NM I P+ G+++ C N+ EE T+
Sbjct: 385 --YGCMVDLFSRAGLLQEAHEFIMNMP---IAPNGVVWGALLGGCKVHKNIKLAEEATRH 439
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHR---LFNEMNVRDEVSWTAL------- 347
+ ++ +SN Y + G ED R L + V+ W+++
Sbjct: 440 LSKLDPLNDGYYVVLSN----IYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVY 495
Query: 348 --VSGYAKFGKANETIDLFEKMLS 369
V+G + E +EK+L
Sbjct: 496 NFVAGDDTHPQTEEIFQTWEKLLQ 519
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 238/628 (37%), Positives = 343/628 (54%), Gaps = 34/628 (5%)
Query: 22 VNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL--GRQIHGHILKFGFGSYVFV 79
+ A+ ++ L + L N S +T L S+SR L G Q+H LK + V
Sbjct: 529 TSSALHLHALRVHCLLPNPSHLTIPIAL-KSASRLPHPLRAGEQLHARSLKLPSHTNPHV 587
Query: 80 GSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDS 139
+ L+ +YAK GL++ A+R FDE M +
Sbjct: 588 LTSLLSLYAKCGLLHRAQRVFDE-------------------------------MPHPST 616
Query: 140 ISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAF 199
+ WT +IT M G REA+ + R G+ D FT VLTAC + L G+ +
Sbjct: 617 VPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRA 676
Query: 200 IIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEA 259
+ +VFV +A VD+Y KC + A VF M K+ V+W AM+ GY NG EA
Sbjct: 677 AEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREA 736
Query: 260 VKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTF 319
+ +F MQ G++PD + + +S+C L +L+ G Q + + AL+
Sbjct: 737 LDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDM 796
Query: 320 YGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTL 379
Y KCG+ ++ +F +M +D + W A++ G G L +M G+K ++ T
Sbjct: 797 YAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTF 856
Query: 380 IGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP 439
IG+L +C+ GL++ GR YF M K Y I P +HY CM+D+LSRAG L+EA ++ MP
Sbjct: 857 IGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMP 916
Query: 440 FPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQ 499
P +A+ LL C+IH N E+ + + L+ L+P+N +YV+LS+IY+++G+W+ ++
Sbjct: 917 MPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAK 976
Query: 500 LRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPD 559
LR M+ KGV K P CSW++++ +VH F D S P SDQIY +L++L +M GY P
Sbjct: 977 LRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPT 1036
Query: 560 MSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISK 619
V+ DVE EK L HHSEKLAIAF LL PG IRV KNLRVCSDCH A K +S+
Sbjct: 1037 TEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSR 1096
Query: 620 ITQREILVRDAVRFHLFKNGECSCGDFW 647
IT REI+VRD RFH F++G CSC D+W
Sbjct: 1097 ITHREIIVRDNNRFHCFRDGSCSCNDYW 1124
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 160/339 (47%), Gaps = 37/339 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP V W LI+ + G + +AV V +G+ S F+ + ++++ R DL
Sbjct: 611 MPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDS---FTAVRVLTACARIADL 667
Query: 61 --GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G + + G VFV + VD+Y K G + A+ FD++ K+ V + M
Sbjct: 668 ATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAM---- 723
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+ G NG REA+DLF M+ EG+ D +
Sbjct: 724 ---------------------------VGGYASNGHPREALDLFLAMQAEGMKPDCYAVA 756
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
L+AC L AL+ G+Q + ++ DN +G+AL+DMY KC S A VF+ M K
Sbjct: 757 GALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKK 816
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-F 297
+++ W AM++G G G + A + M+++G++ +D T ++ SC + +++G + F
Sbjct: 817 DIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYF 876
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
H + + + I +V + G ++++H+L ++M
Sbjct: 877 HNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDM 915
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 96/226 (42%), Gaps = 48/226 (21%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRR--CV 58
M D V+W ++ G+AS+G +A+ ++ M +G+ ++ +S+ R +
Sbjct: 712 MRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGM---KPDCYAVAGALSACTRLGAL 768
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
DLGRQ + F +G+ L+DMYAK G +A F ++ +K+I+++N MI GL
Sbjct: 769 DLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGL 828
Query: 119 -----------------------------------LRRGLVEESRRLFRGMKDKDSIS-- 141
GL+++ RR F M IS
Sbjct: 829 GMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPR 888
Query: 142 ---WTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ M+ L + GL +EA L +M + A+ G++L C
Sbjct: 889 IEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAV---ILGALLGGC 931
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/551 (41%), Positives = 331/551 (60%), Gaps = 33/551 (5%)
Query: 130 LFRGMKDKDSI-SWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
LF DK ++ SW ++I L ++G EA+ F MR L ++ TF + +C LL
Sbjct: 31 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 90
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
L G+Q H + + ++FV SALVDMY KC ++ A ++F ++ +N+VSWT+M+
Sbjct: 91 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 150
Query: 249 GY-------------------------------GQNGCSEEAVKIFCNMQRNG-IEPDDF 276
GY QNG S E+++IF M ++G I +
Sbjct: 151 GYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAV 210
Query: 277 TLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
TL +V+ +CA+ S G H + + GL S + V +++ Y KCG +E + + F+ M
Sbjct: 211 TLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRM 270
Query: 337 NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR 396
++ SW+A+V+GY G A E +++F +M G+KP+ +T + VL+ACS AGL+E+G
Sbjct: 271 REKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGW 330
Query: 397 HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRI 456
H+F+ M E+ + P +HY CM+D+L RAG L+EA I M PD + W LL +CR+
Sbjct: 331 HWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRM 390
Query: 457 HGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCS 516
H NV++G+ +A L ELDP N YVLLS+IYA G+W+ V ++R M+ G+ K PG S
Sbjct: 391 HKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFS 450
Query: 517 WIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKML 576
+ K RVH+F D P ++IY LEKL+ K+ + GYVPDM+SVLHDV EK +L
Sbjct: 451 LVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVL 510
Query: 577 NHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLF 636
HSEKLA+AFG++ PG I ++KNLRVC DCH A K+ISKI REI+VRD+ RFH F
Sbjct: 511 RVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHF 570
Query: 637 KNGECSCGDFW 647
++G CSCGD+W
Sbjct: 571 RDGLCSCGDYW 581
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 125/361 (34%), Positives = 201/361 (55%), Gaps = 8/361 (2%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
SWN +I+ A G +A++ ++ M K L +R TF + S+ + GRQ H
Sbjct: 43 SWNSVIAELARSGDSVEALRAFSSMRKLSL-KPNRSTFPCAIKSCSALLDLHSGRQAHQQ 101
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
L FGF +FV S LVDMY+K G + DA+ FDE+ +NIV + +MITG ++ +
Sbjct: 102 ALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRA 161
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG-LAMDQFTFGSVLTACGG 186
R+F GM ++D ISW ++I QNG+ E++++F M +G + + T +VL AC
Sbjct: 162 LRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAH 221
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+ GK IH +I+ + NVFVG++++DMYCKC ++ A F M KNV SW+AM
Sbjct: 222 SGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAM 281
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHGRSLVTG 305
+ GYG +G ++EA+++F M G++P+ T SV+++C++ LEEG F S
Sbjct: 282 VAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFD 341
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKANETIDLF 364
+ + +V G+ G ++++ L M +R D V W AL+ + ++ +DL
Sbjct: 342 VEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGA----CRMHKNVDLG 397
Query: 365 E 365
E
Sbjct: 398 E 398
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 122/249 (48%), Gaps = 33/249 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +SWN +I+ +A +G +++++++ M+KDG N + +T S +L+ + L
Sbjct: 168 MAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRL 227
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ IH ++K G S VFVG+ ++DMY K G + A++ FD + EKN+ ++ M+ G
Sbjct: 228 GKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGY-- 285
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GM +G +EA+++F EM + G+ + TF SV
Sbjct: 286 ------------GM-----------------HGHAKEALEVFYEMNMAGVKPNYITFVSV 316
Query: 181 LTACGGLLALEEGKQ-IHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK- 238
L AC LEEG A D + V +VD+ + +K A + + M +
Sbjct: 317 LAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRP 376
Query: 239 NVVSWTAML 247
+ V W A+L
Sbjct: 377 DFVVWGALL 385
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/639 (36%), Positives = 356/639 (55%), Gaps = 32/639 (5%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN + A A+ +Y ML+ G + TF L ++ LG Q HG I
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHG-DRPNAFTFPFALKSCAALSLPILGSQFHGQI 66
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
K G FV + L+ MY K L+ +A++ F+E N SR
Sbjct: 67 TKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEE----NF-----------------HSR 105
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
+L ++ + +++G + N +A+ LFR+M EG+ ++ T ++ AC +
Sbjct: 106 KL--------TVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPI 157
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
LE G +H ++ +V V + + MY KC S+ YA+ +F M K ++SW AM+
Sbjct: 158 NLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVS 217
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
GY QNG + ++++ NM NG+ PD TL V+SSCANL + G + + +G S
Sbjct: 218 GYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTS 277
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
++NAL+ Y +CGN+ + +F+ M R VSWTA++ GY G + LF++M+
Sbjct: 278 NPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMI 337
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
G++PD + VLSACS AGL ++G YF++M + Y + P +HY+CM+D+L RAGRL
Sbjct: 338 RSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRL 397
Query: 429 EEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIY 488
+EA++ I MP PD W LL +C+IH NVE+ + A E ++EL+P N YVLLS+IY
Sbjct: 398 KEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIY 457
Query: 489 ASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLN 548
++ V ++R M+EK ++KDPGCS+++ K RVH F D + SD+IY LE+L
Sbjct: 458 SNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELE 517
Query: 549 RKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCS 608
+++E P+ + + + + HSEKLA+AFGLL G + ++KNLR+C
Sbjct: 518 AIIMQEFGKPEKDN--REESNKDGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICE 575
Query: 609 DCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
DCH K +SKI R++ VRDA RFH F+NG CSC D+W
Sbjct: 576 DCHLFFKMVSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 614
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 187/380 (49%), Gaps = 8/380 (2%)
Query: 139 SISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHA 198
S W T + L + +A+ L+ +M G + FTF L +C L G Q H
Sbjct: 5 STPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHG 64
Query: 199 FIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT--MAWKNVVSWTAMLVGYGQNGCS 256
I + FV + L+ MYCK + A VF + K V + A++ GY N
Sbjct: 65 QITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKC 124
Query: 257 EEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNAL 316
+AV +F M G+ + TL +I +C + +LE G+ H +L G S ++V N
Sbjct: 125 SDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCF 184
Query: 317 VTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDE 376
+T Y KCG++ + +LF+EM V+ +SW A+VSGYA+ G A ++L+ M +G+ PD
Sbjct: 185 ITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDP 244
Query: 377 VTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFIN 436
VTL+GVLS+C+ G G H E ++ G +I++ +R G L +A++ +
Sbjct: 245 VTLVGVLSSCANLGAQSVG-HEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFD 303
Query: 437 KMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLE--LDPYNPASYVLLSSIYASKGKW 494
MP + W ++ +HG+ EI + ++ ++P + ++V + S + G
Sbjct: 304 GMP-ERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEP-DGTAFVCVLSACSHAGLT 361
Query: 495 DHVSQLRRTMREKGVRKDPG 514
D + + M+ + + +PG
Sbjct: 362 DQGLEYFKMMK-RNYQLEPG 380
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 203/410 (49%), Gaps = 46/410 (11%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V +N L+SG+ S+ +DAV ++ M ++G+ ++ +T ++ S ++LG +H
Sbjct: 109 VCYNALVSGYVSNSKCSDAVLLFRQMNEEGVP-VNSVTLLGLIPACVSPINLELGSSLHC 167
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
LK+GF S V V + + MY K G + A++ FDE+P K ++ +N M++G +
Sbjct: 168 STLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQ------ 221
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
NGL ++L+R M + G+ D T VL++C
Sbjct: 222 -------------------------NGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCAN 256
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L A G ++ + + N F+ +AL++MY +C ++ A++VF M + +VSWTA+
Sbjct: 257 LGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAI 316
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF-----HGRS 301
+ GYG +G E AV++F M R+GIEPD V+S+C++ ++G ++
Sbjct: 317 IGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQ 376
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKANET 360
L G + + +V G+ G ++++ L M ++ D W AL+ G K K E
Sbjct: 377 LEPGPEHY----SCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALL-GACKIHKNVEL 431
Query: 361 IDL-FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
+L FE+++ L+P+ + +LS KG IM+KE ++
Sbjct: 432 AELAFERVIE--LEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLK 479
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 115/254 (45%), Gaps = 44/254 (17%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP +SWN ++SG+A +G + +++Y M +G+ + +T +L C +L
Sbjct: 204 MPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGV-HPDPVTLVGVL-----SSCANL 257
Query: 61 GRQIHGHILKF-----GFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
G Q GH ++F GF S F+ + L++MYA+ G + A+ FD +PE+ +V
Sbjct: 258 GAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLV------ 311
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
SWT +I G +G A+ LF+EM G+ D
Sbjct: 312 -------------------------SWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGT 346
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESVFRT 234
F VL+AC ++G + + RN + S +VD+ + +K A+++ +
Sbjct: 347 AFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIES 406
Query: 235 MAWK-NVVSWTAML 247
M K + W A+L
Sbjct: 407 MPIKPDGAVWGALL 420
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/597 (39%), Positives = 342/597 (57%), Gaps = 70/597 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SWN ++SG A H +A++ + M + L+ +F + L + +++
Sbjct: 111 MPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDF-VLNEYSFGSALSACAGLTDLNM 169
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G QIH I K + V++GS LVDMY+K G++ A+R FD
Sbjct: 170 GIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFD------------------- 210
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GM ++ +SW ++IT QNG +A+++F M G+ D+ T SV
Sbjct: 211 ------------GMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASV 258
Query: 181 LTACGGLLALEEGKQIHAFIIRND-HKDNVFVGSALVDMYCKCK---------------- 223
++AC A+ EG QIHA +++ D +++++ +G+ALVDMY KC+
Sbjct: 259 VSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRN 318
Query: 224 ---------------SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR 268
S+K A +F M KNVVSW A++ GY QNG +EEAV++F ++R
Sbjct: 319 VVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKR 378
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI------SFITVSNALVTFYGK 322
I P +T G+++++CANLA L+ G Q H + L G S I V N+L+ Y K
Sbjct: 379 ESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMK 438
Query: 323 CGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGV 382
CG +ED +F M RD VSW A++ GYA+ G +++F KML G KPD VT+IGV
Sbjct: 439 CGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGV 498
Query: 383 LSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPP 442
LSACS AGLVE+GR YF M E G+ P+ DH+TCM+D+L RAG L+EA I MP P
Sbjct: 499 LSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQP 558
Query: 443 DAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRR 502
D + W +LL++C++HGN+E+GK+ AE L+E+DP N YVLLS++YA G+W V ++R+
Sbjct: 559 DNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRK 618
Query: 503 TMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPD 559
MR++GV K PGCSWI+ +SRVH+F D P I+ L+ L +M GYVP+
Sbjct: 619 QMRQRGVIKQPGCSWIEIQSRVHVFMVKDKRHPLKKDIHLVLKFLTEQMKWAGYVPE 675
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 145/462 (31%), Positives = 247/462 (53%), Gaps = 18/462 (3%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
R+IH I+K F S +F+ + LVD Y K G DA++ FD +P++N YN +++ L +
Sbjct: 38 ARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTK 97
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G ++E+ +F+ M + D SW M++G Q+ EA+ F +M E +++++FGS
Sbjct: 98 FGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSA 157
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+AC GL L G QIHA I ++ + +V++GSALVDMY KC + A+ F MA +N+
Sbjct: 158 LSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNI 217
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW +++ Y QNG + +A+++F M NG+EPD+ TL SV+S+CA+ +++ EG Q H R
Sbjct: 218 VSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHAR 277
Query: 301 SLVTGLI-SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ + + + NALV Y KC + ++ +F+ M +R+ VS T++V GYA+
Sbjct: 278 VVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKA 337
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+F M+ + V+ +++ ++ G E+ F +++K I P H + ++
Sbjct: 338 ARLMFSNMMEKNV----VSWNALIAGYTQNGENEEAVRLF-LLLKRESIWPTHYTFGNLL 392
Query: 420 DILSRAGRLE---EAKSFINKMPF------PPDAIGWATLLSSCRIHGNVEIGKWAAESL 470
+ + L+ +A + I K F D +L+ G VE G E +
Sbjct: 393 NACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERM 452
Query: 471 LELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKD 512
+E D S+ + YA G + ++ R M G + D
Sbjct: 453 VERD---VVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPD 491
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 144/300 (48%), Gaps = 31/300 (10%)
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
+D F +L +C + + ++IHA II+ +F+ + LVD Y KC + A V
Sbjct: 17 LDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKV 76
Query: 232 FRTMAWKNV-------------------------------VSWTAMLVGYGQNGCSEEAV 260
F M +N SW AM+ G+ Q+ EEA+
Sbjct: 77 FDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEAL 136
Query: 261 KIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFY 320
+ F +M ++++ GS +S+CA L L G Q H + + + + +ALV Y
Sbjct: 137 RFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMY 196
Query: 321 GKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLI 380
KCG + + R F+ M VR+ VSW +L++ Y + G A + +++F M+ +G++PDE+TL
Sbjct: 197 SKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLA 256
Query: 381 GVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF 440
V+SAC+ + +G +VK R ++D+ ++ R+ EA+ ++MP
Sbjct: 257 SVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPL 316
>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Cucumis sativus]
Length = 598
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/600 (39%), Positives = 354/600 (59%), Gaps = 33/600 (5%)
Query: 49 LIMSSSR-RCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKN 107
L++S +R R + G Q+H HILKFG + V L+++Y+K L + + FDE P+K+
Sbjct: 31 LLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKS 90
Query: 108 IVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL 167
S +W+++I+ QN A+ FR M
Sbjct: 91 -------------------------------STTWSSVISAFAQNEAPLLALQFFRRMLN 119
Query: 168 EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY 227
+G+ D + S ACG L + GK +H ++ + +VFVGS+LVDMY KC I
Sbjct: 120 DGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGD 179
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN 287
A +F M +NVVSW+ M+ GY Q EA+ +F ++ +DFT SVI C++
Sbjct: 180 ARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSS 239
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
LE G HG L S V +AL++ Y KCG IE ++++F+E+ R+ W ++
Sbjct: 240 STFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSM 299
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYG 407
+ A+ LFE+M + G+KP+ ++ + VL ACS AGLVEKGR YF +M ++YG
Sbjct: 300 LIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLM-RDYG 358
Query: 408 IRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAA 467
I P +HY ++D+L RAG+L+EA S I +MP P W LL+ CRIH + E+ + A
Sbjct: 359 IEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVA 418
Query: 468 ESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF 527
+ +LE+D + +VLLS+ YA+ G+++ +++R+ +R++GV+K+ G SW++ ++VH F
Sbjct: 419 DRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTF 478
Query: 528 SADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAF 587
+A D S +IY +LE+L +M K GYV D S VL V+ EK + + +HSE+LAIAF
Sbjct: 479 TAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAF 538
Query: 588 GLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
GL+ PPG PIRV+KNLRVC DCH A K++SK R ++VRD RFH F++G+CSCGD+W
Sbjct: 539 GLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 170/350 (48%), Gaps = 33/350 (9%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P +W+ +IS A + + A++ + ML DG+ I S RR D+G
Sbjct: 87 PKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRS-DVG 145
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+ +H +K G+ VFVGS LVDMYAK G I DA+ FDE+PE+N+V
Sbjct: 146 KSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVV------------ 193
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
SW+ MI G Q EA+ LF++ +E + ++ FTF SV+
Sbjct: 194 -------------------SWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVI 234
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
C LE GK IH ++ + FVGSAL+ +Y KC I+ A VF + +N+
Sbjct: 235 RVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLG 294
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
W +ML+ Q+ ++ +F M G++P+ + SV+ +C++ +E+G ++
Sbjct: 295 LWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLM 354
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
G+ +LV G+ G ++++ + +M +R E W AL++G
Sbjct: 355 RDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTG 404
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 120/250 (48%), Gaps = 33/250 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW+ +I G+A +A+ ++ L + + +++ TFS+++ + SS ++L
Sbjct: 187 MPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDV-DVNDFTFSSVIRVCSSSTFLEL 245
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ IHG LK F S FVGS L+ +Y+K G+I A + FDE+P +N+ GL
Sbjct: 246 GKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNL--------GL-- 295
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
W +M+ Q+ + LF EM G+ + +F SV
Sbjct: 296 ---------------------WNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSV 334
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC +E+G++ + + + ++LVD+ + ++ A SV + M +
Sbjct: 335 LYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPT 394
Query: 241 VS-WTAMLVG 249
S W A+L G
Sbjct: 395 ESVWGALLTG 404
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 106/239 (44%), Gaps = 12/239 (5%)
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
+ +N E + + +++ S SL +G Q H L GL + VS+ L+ Y K
Sbjct: 16 LNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQL 75
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
S ++F+E + +W++++S +A+ + F +ML+ G++PD+ A
Sbjct: 76 PLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKA 135
Query: 386 CS--RAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPD 443
C R V K H + Y + + ++D+ ++ G + +A+ ++MP +
Sbjct: 136 CGFLRRSDVGKSVHCLAVKTGYYCDVFVG---SSLVDMYAKCGEIGDARHLFDEMP-ERN 191
Query: 444 AIGWATLL-SSCRIHGNVEIGKWAAESLLELDPYNPASY-----VLLSSIYASKGKWDH 496
+ W+ ++ ++ VE ++L+E N ++ V SS + GK H
Sbjct: 192 VVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIH 250
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 251/651 (38%), Positives = 385/651 (59%), Gaps = 37/651 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN +ISG + +AV ++ M ++G+ S+ + + L +S + L
Sbjct: 416 MPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVP-SKFSVISTLSSCASLGWIML 474
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIHG +K G V V + L+ +YA+ +
Sbjct: 475 GQQIHGEGIKCGLDLDVSVSNALLTLYAETDCM--------------------------- 507
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLE-REAIDLFREMRLEGLAMDQFTFGS 179
EE +++F M + D +SW + I L + +AI F EM G ++ TF +
Sbjct: 508 ----EEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFIN 563
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA-WK 238
+L+A L LE G+QIHA I+++ D+ + + L+ Y KC+ ++ E +F M+ +
Sbjct: 564 ILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERR 623
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+ VSW AM+ GY NG +A+ + M + G DDFTL +V+S+CA++A+LE G + H
Sbjct: 624 DEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVH 683
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
++ L + + V +ALV Y KCG I+ + R F M VR+ SW +++SGYA+ G
Sbjct: 684 ACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGG 743
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
+ + LF +M HG PD VT +GVLSACS GLV++G +F+ M + Y + P +H++CM
Sbjct: 744 KALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCM 803
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS-CRIHG-NVEIGKWAAESLLELDPY 476
+D+L RAG +++ + FI MP P+A+ W T+L + CR + N E+G+ AA+ L+EL+P
Sbjct: 804 VDLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPL 863
Query: 477 NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPY 536
N +YVLLS+++A+ GKW+ V + R MR V+K+ GCSW+ K VH+F A D + P
Sbjct: 864 NAVNYVLLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPE 923
Query: 537 SDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGL 596
++IY +L+++ KM GYVP+ L+D+EL K ++L++HSEKLAIAF +L L
Sbjct: 924 KEKIYDKLKEIMNKMRDLGYVPETKYALYDLELENKEELLSYHSEKLAIAF-VLTRQSEL 982
Query: 597 PIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
PIR++KNLRVC DCH A KYIS I R+I++RD+ RFH F G CSC D+W
Sbjct: 983 PIRIIKNLRVCGDCHTAFKYISNIVNRQIILRDSNRFHHFDGGICSCQDYW 1033
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/458 (28%), Positives = 230/458 (50%), Gaps = 48/458 (10%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSR---ITFSTMLIMSSSRRCVDLG--- 61
SWN +IS + G A K+++ M ++ R TF +++ ++ S VD G
Sbjct: 211 SWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACS--LVDCGLTL 268
Query: 62 -RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
Q+ I K F ++VGS LV +G R
Sbjct: 269 LEQMLARIEKSSFVKDLYVGSALV-------------------------------SGFAR 297
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL++ ++ +F M D+++++ ++ GL + EA +F+EM+ + + ++ ++ +
Sbjct: 298 YGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMK-DLVEINASSYAVL 356
Query: 181 LTACGGLLALEEGK----QIHAFIIRNDHKDN-VFVGSALVDMYCKCKSIKYAESVFRTM 235
L+A L+EGK ++HA++IRN D + +G+ALV++Y KC +I A S+F+ M
Sbjct: 357 LSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLM 416
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
K+ VSW +++ G N EEAV F M+RNG+ P F++ S +SSCA+L + G
Sbjct: 417 PSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQ 476
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF- 354
Q HG + GL ++VSNAL+T Y + +E+ ++F M D+VSW + + A
Sbjct: 477 QIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSE 536
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
+ I F +M+ G KP+ VT I +LSA S L+E GR +++K + + +
Sbjct: 537 ASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILK-HSVADDNAI 595
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
++ + ++E+ + ++M D + W ++S
Sbjct: 596 ENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMIS 633
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 200/409 (48%), Gaps = 43/409 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDG-LGNLSRITFSTMLIMSSSRRCVD 59
MP + VSW+ L+SG+A +G ++A ++ ++ G L N I + +
Sbjct: 100 MPQKNLVSWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLK 159
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGL-IYDAKRGFDELPEKNIVMYNTMITGL 118
LG +IHG I K + S + + + L+ MY+ I DA+R F+E+ K +N++I+
Sbjct: 160 LGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVY 219
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
RRG + +LF M +REA +L +++TF
Sbjct: 220 CRRGDAISAFKLFSSM--------------------QREATEL-------NCRPNEYTFC 252
Query: 179 SVLT-ACG----GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
S++T AC GL LE Q+ A I ++ +++VGSALV + + I A+ +F
Sbjct: 253 SLVTVACSLVDCGLTLLE---QMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFE 309
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE 293
M +N V+ ++VG + EEA KIF M ++ +E + + ++S+ ++L+E
Sbjct: 310 QMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEM-KDLVEINASSYAVLLSAFTEFSNLKE 368
Query: 294 ----GTQFHGRSLVTGLIS-FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
G + H + L+ +I + NALV Y KC I+++ +F M +D VSW +++
Sbjct: 369 GKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSII 428
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH 397
SG + E + F M +G+ P + ++I LS+C+ G + G+
Sbjct: 429 SGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQ 477
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 198/409 (48%), Gaps = 48/409 (11%)
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
V+ Q+H I K G S VF + LV+++ + G + A++ FDE+P+KN+V ++ +++G
Sbjct: 55 VEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSG 114
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
+ G+ +E+ LFRG+ + GL+ N +
Sbjct: 115 YAQNGMPDEACMLFRGI----------ISAGLLPN---------------------HYAI 143
Query: 178 GSVLTACG--GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK-SIKYAESVFRT 234
GS L AC G L+ G +IH I ++ + ++ + + L+ MY C SI A VF
Sbjct: 144 GSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEE 203
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE----PDDFTLGSVISSCANLAS 290
+ K SW +++ Y + G + A K+F +MQR E P+++T S+++ +L
Sbjct: 204 IKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVD 263
Query: 291 --LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
L Q R + + + V +ALV+ + + G I+ + +F +M+ R+ V+ L+
Sbjct: 264 CGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLM 323
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
G A+ + E +F++M ++ + + +LSA + +++G+ + V Y I
Sbjct: 324 VGLARQHQGEEAAKIFKEM-KDLVEINASSYAVLLSAFTEFSNLKEGKRKGQ-EVHAYLI 381
Query: 409 R-PIHDHY----TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
R + D + ++++ ++ ++ A+S MP D + W +++S
Sbjct: 382 RNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMP-SKDTVSWNSIIS 429
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 150/310 (48%), Gaps = 15/310 (4%)
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
+E+ Q+H I + +VF + LV+++ + ++ A+ +F M KN+VSW+ ++ G
Sbjct: 55 VEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSG 114
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS--LEEGTQFHGRSLVTGLI 307
Y QNG +EA +F + G+ P+ + +GS + +C L L+ G + HG +
Sbjct: 115 YAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYA 174
Query: 308 SFITVSNALVTFYGKC-GNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
S + +SN L++ Y C +I+D+ R+F E+ ++ SW +++S Y + G A LF
Sbjct: 175 SDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSS 234
Query: 367 MLSHG----LKPDEVTLIGVLS-ACSRAGLVEKGRHYFEIMVKEYGIRP-IHDHY--TCM 418
M +P+E T +++ ACS LV+ G E M+ + D Y + +
Sbjct: 235 MQREATELNCRPNEYTFCSLVTVACS---LVDCGLTLLEQMLARIEKSSFVKDLYVGSAL 291
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
+ +R G ++ AK +M ++ R H E K E + +L N
Sbjct: 292 VSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKE-MKDLVEINA 350
Query: 479 ASYVLLSSIY 488
+SY +L S +
Sbjct: 351 SSYAVLLSAF 360
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%)
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
++E+ Q H + TGL S + N LV + + GN+ + +LF+EM ++ VSW+ LVS
Sbjct: 54 TVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVS 113
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
GYA+ G +E LF ++S GL P+ + L AC G
Sbjct: 114 GYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELG 154
>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
Length = 613
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/583 (39%), Positives = 351/583 (60%), Gaps = 22/583 (3%)
Query: 78 FVGSP---------LVDMYAKL-GLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
FV +P L+ YA+ G + DA+ FD +P ++V YNT++ G + +
Sbjct: 40 FVSTPRKTTATYNCLLAGYARAPGRLADARHLFDRIPTPDVVSYNTLLLCHFASGDADGA 99
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT--ACG 185
RRLF M +D SW TM++GL ++G EA +F M + + ++ ++++ AC
Sbjct: 100 RRLFASMPVRDVASWNTMVSGLSKSGAVEEAKVVFLAMPVR----NSVSWNAMVSGFACS 155
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
G ++ E + K++ + +A+V Y ++ A F M +N+VSW A
Sbjct: 156 GDMSTAE-----EWFRNAPEKEDAVLWTAMVSGYMDIGNVVKAIKYFEAMPVRNLVSWNA 210
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++ GY +N +++A+++F M R ++P+ TL SV+ C+NL++L G Q H +
Sbjct: 211 VVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKL 270
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
L +TV +LV+ Y KCG++ + LF EM+ RD V+W A++SGYA+ G E I+LF
Sbjct: 271 LLSRNLTVGTSLVSMYCKCGDLSSACILFGEMHTRDVVAWNAMISGYAQHGDGKEAINLF 330
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
E+M G++P+ +T + VL+AC GL + G FE M + YGI P DHY+CM+D+L R
Sbjct: 331 ERMKDEGVEPNWITFVVVLTACIHTGLCDFGIQCFEGMQELYGIEPRVDHYSCMVDLLCR 390
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG+LE A FI MPF P + TLL++CR++ N+E + AA L+E DP + +YV L
Sbjct: 391 AGKLERAVDFIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQL 450
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
++IYA +WD VS++RR M++ V K PG SWI+ K +H F ++D P I+ +L
Sbjct: 451 ANIYAVANQWDDVSRVRRWMKDNTVVKTPGYSWIEIKGVLHEFRSNDRLHPQLYLIHEKL 510
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
+L +M + GYVPD+ VLHDV+ + K++ML HSEKLAIAFGL+ G+ +R+ KNL
Sbjct: 511 GQLAERMKEMGYVPDLDFVLHDVDETMKVQMLMRHSEKLAIAFGLISTAHGMTLRIFKNL 570
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RVC DCHNA K IS I REI++RD RFH F+ G CSC D+W
Sbjct: 571 RVCGDCHNAAKVISMIEDREIILRDTTRFHHFRGGHCSCDDYW 613
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 170/361 (47%), Gaps = 44/361 (12%)
Query: 2 PFHDGVSWNLLISGHA-SHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
P ++N L++G+A + G + DA ++ D + ++++T+L+ + D
Sbjct: 44 PRKTTATYNCLLAGYARAPGRLADARHLF-----DRIPTPDVVSYNTLLLCHFASGDADG 98
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
R++ + S+ + +V +K G + +AK F +P +N V +N M++G
Sbjct: 99 ARRLFASMPVRDVASW----NTMVSGLSKSGAVEEAKVVFLAMPVRNSVSWNAMVSGFAC 154
Query: 121 RGLVEESRRLFRGMKDK-DSISWTTMITGLM----------------------------- 150
G + + FR +K D++ WT M++G M
Sbjct: 155 SGDMSTAEEWFRNAPEKEDAVLWTAMVSGYMDIGNVVKAIKYFEAMPVRNLVSWNAVVAG 214
Query: 151 --QNGLEREAIDLFREM-RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKD 207
+N +A+ LFR M R + + T SVL C L AL GKQIH + ++
Sbjct: 215 YVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLLLSR 274
Query: 208 NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQ 267
N+ VG++LV MYCKC + A +F M ++VV+W AM+ GY Q+G +EA+ +F M+
Sbjct: 275 NLTVGTSLVSMYCKCGDLSSACILFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMK 334
Query: 268 RNGIEPDDFTLGSVISSCANLASLEEGTQ-FHGRSLVTGLISFITVSNALVTFYGKCGNI 326
G+EP+ T V+++C + + G Q F G + G+ + + +V + G +
Sbjct: 335 DEGVEPNWITFVVVLTACIHTGLCDFGIQCFEGMQELYGIEPRVDHYSCMVDLLCRAGKL 394
Query: 327 E 327
E
Sbjct: 395 E 395
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 112/245 (45%), Gaps = 44/245 (17%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSWN +++G+ + +DA++++ M+++ + T S++L+ S+ +
Sbjct: 200 MPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGF 259
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIH +K + VG+ LV MY K G + A F E+ +++V +N MI+G +
Sbjct: 260 GKQIHQWCMKLLLSRNLTVGTSLVSMYCKCGDLSSACILFGEMHTRDVVAWNAMISGYAQ 319
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G +E+ LF MKD EG+ + TF V
Sbjct: 320 HGDGKEAINLFERMKD-------------------------------EGVEPNWITFVVV 348
Query: 181 LTAC-------GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
LTAC G+ E ++++ R DH S +VD+ C+ ++ A R
Sbjct: 349 LTACIHTGLCDFGIQCFEGMQELYGIEPRVDHY------SCMVDLLCRAGKLERAVDFIR 402
Query: 234 TMAWK 238
+M ++
Sbjct: 403 SMPFE 407
>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
Length = 1161
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 242/656 (36%), Positives = 373/656 (56%), Gaps = 44/656 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW+ L+SGH +G + ++ +++ M + G+ + TFST L ++
Sbjct: 438 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYP-NEFTFSTNLKACGLLNALEK 496
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G QIHG LK GF V VG+ LVDMY+K G I
Sbjct: 497 GLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI--------------------------- 529
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM--DQFTFG 178
E+ ++FR + D+ ISW MI G + G +A+D F M+ + D+FT
Sbjct: 530 ----NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLT 585
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
S+L AC + GKQIH F++R+ + + +LVD+Y KC + A F +
Sbjct: 586 SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK 645
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
K ++SW+++++GY Q G EA+ +F +Q + D F L S+I A+ A L +G Q
Sbjct: 646 EKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQ 705
Query: 297 FHGRS--LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
+ L +GL + +V N++V Y KCG ++++ + F EM ++D +SWT +++GY K
Sbjct: 706 MQALAVKLPSGLET--SVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKH 763
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G +++ +F +ML H ++PDEV + VLSACS +G++++G F +++ +GI+P +H
Sbjct: 764 GLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEH 823
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
Y C++D+L RAGRL+EAK I+ MP P+ W TLLS CR+HG++E+GK + LL +D
Sbjct: 824 YACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRID 883
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS 534
NPA+YV++S++Y G W+ R KG++K+ G SW++ + VH F + + S
Sbjct: 884 AKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSH 943
Query: 535 PYSDQIYAELEKLNRKMIKE-GYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLL--- 590
P + I L++ R++ +E GYV + LHD++ K + L HSEKLAI L
Sbjct: 944 PLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGG 1003
Query: 591 FIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDF 646
G IRV KNLRVC DCH K +SKIT+ +VRDAVRFH F++G CSCGD+
Sbjct: 1004 LNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1059
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 204/379 (53%), Gaps = 11/379 (2%)
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
P N++ N +I + + ++F M +++ +SW+ +++G + NG + ++ LF
Sbjct: 408 PWLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFS 467
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
EM +G+ ++FTF + L ACG L ALE+G QIH F ++ + V VG++LVDMY KC
Sbjct: 468 EMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCG 527
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE--PDDFTLGSV 281
I AE VFR + ++++SW AM+ G+ G +A+ F MQ I+ PD+FTL S+
Sbjct: 528 RINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSL 587
Query: 282 ISSCANLASLEEGTQFHGRSLVTGL--ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
+ +C++ + G Q HG + +G S T++ +LV Y KCG + + + F+++ +
Sbjct: 588 LKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEK 647
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
+SW++L+ GYA+ G+ E + LF+++ + D L ++ + L+ +G+
Sbjct: 648 TMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQ 707
Query: 400 EIMVK-EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ VK G+ ++D+ + G ++EA+ +M D I W +++ HG
Sbjct: 708 ALAVKLPSGLET--SVLNSVVDMYLKCGLVDEAEKCFAEMQL-KDVISWTVVITGYGKHG 764
Query: 459 NVEIGKWAAESLLELDPYN 477
+GK + E+ +N
Sbjct: 765 ---LGKKSVRIFYEMLRHN 780
>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/577 (38%), Positives = 347/577 (60%), Gaps = 34/577 (5%)
Query: 72 GFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLF 131
GF ++ + ++ M+ K G++ DA+R FDE+PE+N+V +NT+I+GL+ G E+ RLF
Sbjct: 5 GFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLF 64
Query: 132 RGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALE 191
++++ E G FTF ++ A GL +
Sbjct: 65 ---------------------------LNMWEEFSDAG----SFTFAVMIRASAGLELIS 93
Query: 192 EGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYG 251
G+Q+HA ++ D++FV AL+DMY KC SI+ A VF M K V W ++ GY
Sbjct: 94 IGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYA 153
Query: 252 QNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFIT 311
+G SEEA+ ++ M+ +G++ D FT ++ CA LAS+E Q H + G S I
Sbjct: 154 LHGYSEEALDMYYEMRDSGVKMDHFTFSMIVRICARLASVEHAKQAHAALIRHGFGSDIV 213
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG 371
+ ALV FY K G IED+ +F++M ++ +SW AL+ GY G+ +E ++LFE+M+
Sbjct: 214 ANTALVDFYSKWGRIEDARHVFDKMASKNVISWNALIGGYGNHGRGSEAVELFEQMIQER 273
Query: 372 LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEA 431
+ P+ +T + VLSACS +GL E+G F+ M ++ I+P HY CMI+++ R G L+EA
Sbjct: 274 MNPNHITFLAVLSACSHSGLSERGWEIFQSMGRDNRIKPRAMHYACMIELMGREGLLDEA 333
Query: 432 KSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASK 491
+ I PF P A WA LL++CR++ N E+GK+AAE L ++P +Y++L +IY S
Sbjct: 334 LALIRGAPFKPTANMWAALLTACRVNENFELGKFAAEKLYGMEPDKLNNYIVLLNIYNSA 393
Query: 492 GKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKM 551
G + + T++ KG+R P CSWI+ K R H+F + D P +IY +++KL ++
Sbjct: 394 GNLKEAADVVHTLKRKGLRMRPVCSWIEVKRRPHVFLSGDNRHPQRKEIYQKVDKLMLEI 453
Query: 552 IKEGYVPDMSSVLHDV-ELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDC 610
K GYVP+ ++L DV E E++++ +HSEKLAIAFGL+ P P+++V+ R+C DC
Sbjct: 454 SKYGYVPNQKTLLPDVDEQEERVRL--YHSEKLAIAFGLISTPYWAPLQIVQGHRICGDC 511
Query: 611 HNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
H A K I+++T REI++RDA RFH FK+G CSC D+W
Sbjct: 512 HEAIKLIARVTGREIVIRDAGRFHHFKHGHCSCEDYW 548
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 205/440 (46%), Gaps = 71/440 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSWN +ISG G +A +++ L + + + TF+ M+ S+ + +
Sbjct: 36 MPERNLVSWNTIISGLVDVGDFMEAFRLF-LNMWEEFSDAGSFTFAVMIRASAGLELISI 94
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H LK G G +FV L+DMY+K G I DA+ F+E+PEK V +NT+I G
Sbjct: 95 GRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYAL 154
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G E EA+D++ EMR G+ MD FTF +
Sbjct: 155 HGYSE-------------------------------EALDMYYEMRDSGVKMDHFTFSMI 183
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ C L ++E KQ HA +IR+ ++ +ALVD Y K I+ A VF MA KNV
Sbjct: 184 VRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNV 243
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SW A++ GYG +G EAV++F M + + P+ T +V+S+C++ E G +
Sbjct: 244 ISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEIFQS 303
Query: 301 SLVTGLISFITVSNA-LVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
I + A ++ G+ G ++++ AL+ G A F
Sbjct: 304 MGRDNRIKPRAMHYACMIELMGREGLLDEA---------------LALIRG-APF----- 342
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH-DHYTCM 418
KP +L+AC E G+ E K YG+ P ++Y +
Sbjct: 343 -------------KPTANMWAALLTACRVNENFELGKFAAE---KLYGMEPDKLNNYIVL 386
Query: 419 IDILSRAGRLEEAKSFINKM 438
++I + AG L+EA ++ +
Sbjct: 387 LNIYNSAGNLKEAADVVHTL 406
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 152/317 (47%), Gaps = 15/317 (4%)
Query: 200 IIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEA 259
+I N + + ++ + ++ M+ KC + A +F M +N+VSW ++ G G EA
Sbjct: 1 MIDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEA 60
Query: 260 VKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTF 319
++F NM + FT +I + A L + G Q H +L G+ I VS AL+
Sbjct: 61 FRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDM 120
Query: 320 YGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTL 379
Y KCG+IED+ +F EM + V W +++GYA G + E +D++ +M G+K D T
Sbjct: 121 YSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTF 180
Query: 380 IGVLSACSRAGLVEKGRHYFEIMVKE-YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
++ C+R VE + +++ +G + + T ++D S+ GR+E+A+ +KM
Sbjct: 181 SMIVRICARLASVEHAKQAHAALIRHGFGSDIVAN--TALVDFYSKWGRIEDARHVFDKM 238
Query: 439 PFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL--DPYNPASYVLLSSIYA------S 490
+ I W L+ HG G A E ++ + NP L+ + A S
Sbjct: 239 A-SKNVISWNALIGGYGNHGR---GSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLS 294
Query: 491 KGKWDHVSQLRRTMREK 507
+ W+ + R R K
Sbjct: 295 ERGWEIFQSMGRDNRIK 311
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 238/650 (36%), Positives = 364/650 (56%), Gaps = 40/650 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D V WN L++G S ++AV+ + M+ DG T +++L ++ V +
Sbjct: 175 VPSPDTVLWNTLLAGL----SGSEAVESFARMVCDGSVRPDATTLASVLPAAAEVADVTM 230
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +H K G + V + L+ +Y+K G
Sbjct: 231 GRCVHSFAEKCGLAEHEHVLTGLISLYSKCGD---------------------------- 262
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
VE +R LF M+ D +++ +I+G NG+ +++LF E+ GL + T ++
Sbjct: 263 ---VESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVAL 319
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ + +H F++++ N V +A+ ++C+ ++ A F TM K +
Sbjct: 320 IPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTM 379
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
SW AM+ GY QNG +E AV +F M + + P+ T+ S +S+CA L +L G H
Sbjct: 380 ESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRI 439
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
L + V AL+ Y KCG+I ++ R+FN M+ ++ VSW A+++GY G+ E
Sbjct: 440 ITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEA 499
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ L++ ML L P T + VL ACS GLVE+G F M +Y I P +H TCM+D
Sbjct: 500 LKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVD 559
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIG---WATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
+L RAG+L+EA I++ FP A+G W LL +C +H + ++ K A++ L ELDP N
Sbjct: 560 LLGRAGQLKEAFELISE--FPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPEN 617
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
YVLLS+++ SK ++ + +R+ + + + K PG + I+ ++ H+F A D + P S
Sbjct: 618 SGYYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQS 677
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
+ IY+ LEKL KMI+ GY P+ + L+DVE EK M+ HSEKLAIAFGLL PG
Sbjct: 678 EAIYSYLEKLTAKMIEAGYRPETEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTE 737
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
IR++KNLRVC DCHNATK+ISK+TQR I+VRDA RFH F++G CSCGD+W
Sbjct: 738 IRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 191/414 (46%), Gaps = 39/414 (9%)
Query: 77 VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKD 136
FV S L +Y L + A++ FD +P + V++NT++ GL
Sbjct: 149 TFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGL------------------ 190
Query: 137 KDSISWTTMITGLMQNGLEREAIDLFREMRLEG-LAMDQFTFGSVLTACGGLLALEEGKQ 195
+G EA++ F M +G + D T SVL A + + G+
Sbjct: 191 ----------SG-------SEAVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMGRC 233
Query: 196 IHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGC 255
+H+F + ++ V + L+ +Y KC ++ A +F M ++V++ A++ GY NG
Sbjct: 234 VHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGM 293
Query: 256 SEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNA 315
+V +F + G+ P+ TL ++I + HG L +G + VS A
Sbjct: 294 VGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTA 353
Query: 316 LVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPD 375
+ T + + ++E + + F+ M + SW A++SGYA+ G + LFE+M+ ++P+
Sbjct: 354 ITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPN 413
Query: 376 EVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFI 435
+T+ LSAC++ G + G+ I+ +E + P T +ID+ ++ G + EA+
Sbjct: 414 PITISSTLSACAQLGALSLGKWLHRIITEE-DLEPNVYVMTALIDMYAKCGSISEARRIF 472
Query: 436 NKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYA 489
N M + + W +++ +HG + +L+ P S LS +YA
Sbjct: 473 NTMD-NKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAH-LLPTSATFLSVLYA 524
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 176/427 (41%), Gaps = 65/427 (15%)
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL- 187
RLFRG D ++N L R L RL D F+F T+ L
Sbjct: 73 RLFRGFPRPDR---------FLRNALLRSLPSL--RPRLLFPCPDSFSFAFAATSLAALC 121
Query: 188 ------LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+ + +HA + + + FV SAL +Y + +A VF T+ + V
Sbjct: 122 SRGGGAASSSAARALHALAVAAGYAADTFVASALAKLYFVLSRVDHARKVFDTVPSPDTV 181
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQFHGR 300
W +L G + EAV+ F M +G + PD TL SV+ + A +A + G H
Sbjct: 182 LWNTLLAGLSGS----EAVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSF 237
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ GL V L++ Y KCG++E + LF+ M D V++ AL+SGY+ G +
Sbjct: 238 AEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSS 297
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAG--LVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
++LF ++++ GL P+ TL+ ++ S G L+ + H F + P+ T +
Sbjct: 298 VNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVS---TAI 354
Query: 419 IDILSRAGRLEEAKSFINKMP----------------------------------FPPDA 444
+ R +E A+ + MP P+
Sbjct: 355 TTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNP 414
Query: 445 IGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL--LSSIYASKGKWDHVSQLRR 502
I ++ LS+C G + +GKW + E D P YV+ L +YA G ++
Sbjct: 415 ITISSTLSACAQLGALSLGKWLHRIITEED-LEPNVYVMTALIDMYAKCGSISEARRIFN 473
Query: 503 TMREKGV 509
TM K V
Sbjct: 474 TMDNKNV 480
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/558 (41%), Positives = 325/558 (58%), Gaps = 35/558 (6%)
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G + +R +F + + + + ++I G L R+AI ++ M L+GL D+FTF S+
Sbjct: 26 GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLF 85
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+CG L EGKQ+H + + ++ + L++MY C + A VF M K+VV
Sbjct: 86 KSCG---VLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVV 142
Query: 242 SWTAMLVGYGQ---------------------------NGCSE-----EAVKIFCNMQRN 269
SW M+ Y Q NG E EA+ +F MQ +
Sbjct: 143 SWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLS 202
Query: 270 GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
G++ D T+ S++ +C +L +LE G H + + + ALV Y KCG+IE +
Sbjct: 203 GVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESA 262
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
R+F EM +D ++WTAL+ G A G+ + ++LF +M +KPD +T +GVL+ACS A
Sbjct: 263 MRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHA 322
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
GLV +G YF M +YGI+P +HY CM+D+L RAGR+ EA+ I MP PD
Sbjct: 323 GLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVG 382
Query: 450 LLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
LLS+CRIHGN+ + + AA+ L+ELDP N +YVLLS+IY+S W+ ++R M E+ +
Sbjct: 383 LLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNI 442
Query: 510 RKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVEL 569
+K PGCS I+ VH F D S P S +IY L+ + R++ GYVPD S VL D++
Sbjct: 443 KKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDE 502
Query: 570 SEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRD 629
EK L+ HSEKLAIAFGLL PG PIRVVKNLRVCSDCH+A K+IS++ REI+VRD
Sbjct: 503 KEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRD 562
Query: 630 AVRFHLFKNGECSCGDFW 647
RFH F G CSC DFW
Sbjct: 563 RNRFHHFTKGSCSCRDFW 580
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 123/391 (31%), Positives = 201/391 (51%), Gaps = 38/391 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + N +I G+ + A+ Y LM+ GL + R TF + L S C
Sbjct: 38 IPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGL-DPDRFTFPS-LFKSCGVLCE-- 93
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H H K GF S ++ + L++MY+ G + A++ FD++ K++V + TMI +
Sbjct: 94 GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQ 153
Query: 121 RGLVEESRRLFRGMKDKDSI-SWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
L E+ +LFR M+ ++ W MI G +++ EA+ LF EM+L G+ D+ T S
Sbjct: 154 WDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMAS 213
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L AC L ALE GK +H +I + + +V +G+ALVDMY KC SI+ A VF+ M K+
Sbjct: 214 LLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKD 273
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
V++WTA++VG G +A+++F MQ + ++PD T V+++C++ + EG +
Sbjct: 274 VMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYF- 332
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
N++ YG +IE + +V + G+ E
Sbjct: 333 --------------NSMPNKYGIQPSIE---------------HYGCMVDMLGRAGRIAE 363
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
DL + M + PD L+G+LSAC G
Sbjct: 364 AEDLIQNM---PMAPDYFVLVGLLSACRIHG 391
>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
Length = 908
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 242/648 (37%), Positives = 378/648 (58%), Gaps = 41/648 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +SWN +++ +A G+ DA+K+ M G + +TF++ L S G+ +
Sbjct: 297 DMISWNSMMACYAQDGNCLDALKLLATMFYMRRG-ANYVTFTSALAACSDPEFATEGKIL 355
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H ++ G V VG+ LV +YAK GL+
Sbjct: 356 HALVIHVGLHENVIVGNALVTLYAK-------------------------------SGLM 384
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
E++++F+ M +D ++W +I G + EA+ F+ MR EG+ ++ T +VL AC
Sbjct: 385 IEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGAC 444
Query: 185 GGLLA----LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LA LE G IHAFII + + +V ++L+ MY KC + + ++F + KN
Sbjct: 445 ---LAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNA 501
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+W AM+ +G EEA+K M+R G+ D+F+ +++ A LA LEEG Q HG
Sbjct: 502 SAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGL 561
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ G S V++A + YGKCG I+D R+ R +SW L S +++ G +
Sbjct: 562 AVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPINRSRLSWNILTSSFSRHGFFEKA 621
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ F +M++ G+KPD VT + +LSACS G+VE+G Y++ M+KE+GI H C+ID
Sbjct: 622 KETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAYYDSMIKEFGIPAKIGHCVCIID 681
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L R+GR EA++FI +MP P W +LL++C+ HGN+E+G+ A E+LL+LDP + ++
Sbjct: 682 LLGRSGRFAEAETFIKEMPVSPTDHVWRSLLAACKTHGNLELGRKAVENLLKLDPSDDSA 741
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVL S+I A+ GKW+ V ++RR M ++K P CSW+K K+++ +F D S P + +I
Sbjct: 742 YVLYSNICATTGKWEDVEKIRRQMGLNKIKKKPACSWVKLKNKLSLFGMGDHSHPQASEI 801
Query: 541 YAELEKLNRKMIKE-GYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
YA+LE+L +KMIKE GY+PD+S L D + +K L +HSE+LA+A+GL+ P G ++
Sbjct: 802 YAKLEEL-KKMIKEAGYIPDISYALQDTDEEQKEHNLWNHSERLALAYGLISSPEGSTLK 860
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ KNLRVC DCH+ K+ S I R+I++RD RFH F G+CSC D+W
Sbjct: 861 IFKNLRVCGDCHSVYKFASGILGRKIVLRDPYRFHQFSGGQCSCTDYW 908
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 122/479 (25%), Positives = 216/479 (45%), Gaps = 37/479 (7%)
Query: 13 ISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFG 72
+SG GS ++++ +N M G+ S + S + G Q+HG I+K G
Sbjct: 1 MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60
Query: 73 FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFR 132
S VFVG+ LV +Y GL DA + F E
Sbjct: 61 LLSDVFVGTSLVHLYGNYGLAADAMKVFQE------------------------------ 90
Query: 133 GMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEE 192
M K+ +SWT ++ + G ++++R MR EG++ + T SV++ C L
Sbjct: 91 -MIYKNVVSWTALMVAYVDYGEPSMVMNIYRRMRSEGMSCNDNTMSSVISTCVSLENELL 149
Query: 193 GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
G Q+ +I+ + NV V ++L+ M+ S++ A VF M + +SW +M+ Y +
Sbjct: 150 GYQVLGHVIKYGLETNVSVANSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIR 209
Query: 253 NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITV 312
NG +E+++ F M R E + TL ++++ C ++ +L+ G H L G S +
Sbjct: 210 NGLCKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCA 269
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGL 372
SN L+T Y G ED+ +F M +D +SW ++++ YA+ G + + L M
Sbjct: 270 SNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRR 329
Query: 373 KPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAK 432
+ VT L+ACS +G+ +V G+ ++ + +++G + EAK
Sbjct: 330 GANYVTFTSALAACSDPEFATEGK-ILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAK 388
Query: 433 SFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL-LELDPYNPASYVLLSSIYAS 490
MP D + W L+ H + E A ++ L + P +Y+ +S++ +
Sbjct: 389 KVFQTMP-KRDGVTWNALIGG---HADSEEPDEALKAFKLMREEGVPINYITISNVLGA 443
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 247/651 (37%), Positives = 369/651 (56%), Gaps = 47/651 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLK-----DGLGNLSRITFSTMLIMSSSR 55
MP D +SWN +ISG+ +G + ++++ +M+K D + S IT +L R
Sbjct: 268 MPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELL--GDDR 325
Query: 56 RCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
LGRQIHG++L+ FG + + L+ MY+ +GLI
Sbjct: 326 ----LGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLI---------------------- 359
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
EE+ +F + +D +SWT MI+G + ++A++ ++ M EG+ D+
Sbjct: 360 ---------EEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEI 410
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
T VL+AC L L+ G +H + V ++L+DMY KCK I A +F +
Sbjct: 411 TIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHST 470
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
KN+VSWT++++G N EA+ F M R ++P+ TL V+S+CA + +L G
Sbjct: 471 LEKNIVSWTSIILGLRINNRCFEALFFFREMIRR-LKPNSVTLVCVLSACARIGALTCGK 529
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV-SWTALVSGYAKF 354
+ H +L TG+ + NA++ Y +CG +E + + F +V EV SW L++GYA+
Sbjct: 530 EIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQF--FSVDHEVTSWNILLTGYAER 587
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
GK +LF++M+ + P+EVT I +L ACSR+G+V +G YF M +Y I P H
Sbjct: 588 GKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKH 647
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
Y C++D+L R+G+LEEA FI KMP PD W LL+SCRIH +VE+G+ AAE++ + D
Sbjct: 648 YACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCRIHHHVELGELAAENIFQDD 707
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS 534
+ Y+LLS++YA GKWD V+++R+ MR+ G+ DPGCSW++ K VH F + D
Sbjct: 708 TTSVGYYILLSNLYADNGKWDKVAEVRKMMRQNGLIVDPGCSWVEVKGTVHAFLSSDNFH 767
Query: 535 PYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPP 594
P +I A LE+ +KM KE V S D+ + K + HSE+LAI FGL+ P
Sbjct: 768 PQIKEINALLERFYKKM-KEAGVEGPESSHMDIMEASKADIFCGHSERLAIVFGLINSGP 826
Query: 595 GLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGD 645
G+PI V KNL +C CHN K+IS+ +REI VRDA +FH FK G CSC D
Sbjct: 827 GMPIWVTKNLYMCQSCHNIVKFISREVRREISVRDAEQFHHFKGGICSCTD 877
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 144/469 (30%), Positives = 233/469 (49%), Gaps = 51/469 (10%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
SWN+L+ G+A G ++A+ +Y+ ML G+ TF +L + GR+IH H
Sbjct: 174 SWNVLVGGYAKAGLFDEALDLYHRMLWVGV-KPDVYTFPCVLRTCGGMPNLVRGREIHVH 232
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
++++GF S V V + L+ MY K G V +
Sbjct: 233 VIRYGFESDVDVVNALITMYVKC-------------------------------GDVNTA 261
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
R +F M ++D ISW MI+G +NG+ E + LF M + D T SV+TAC L
Sbjct: 262 RLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELL 321
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
G+QIH +++R + + + ++L+ MY I+ AE+VF +++VSWTAM+
Sbjct: 322 GDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMI 381
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
GY ++A++ + M+ GI PD+ T+ V+S+C+ L +L+ G H + GL+
Sbjct: 382 SGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLV 441
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
S+ V+N+L+ Y KC I+ + +F+ ++ VSWT+++ G + E + F +M
Sbjct: 442 SYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREM 501
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGR----HYFEIMVKEYGIRPIHDHYTCMIDILS 423
+ LKP+ VTL+ VLSAC+R G + G+ H V G P ++D+
Sbjct: 502 IRR-LKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMP-----NAILDMYV 555
Query: 424 RAGRLEEA-KSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL 471
R GR+E A K F + + W LL+ G E GK A + L
Sbjct: 556 RCGRMEYAWKQFFS---VDHEVTSWNILLT-----GYAERGKGAHATEL 596
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 186/346 (53%), Gaps = 2/346 (0%)
Query: 112 NTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLA 171
N +++ +R G + ++ +F M+ ++ SW ++ G + GL EA+DL+ M G+
Sbjct: 145 NALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVK 204
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
D +TF VL CGG+ L G++IH +IR + +V V +AL+ MY KC + A V
Sbjct: 205 PDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLV 264
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASL 291
F M ++ +SW AM+ GY +NG E +++F M + ++PD T+ SVI++C L
Sbjct: 265 FDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDD 324
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
G Q HG L T ++ N+L+ Y G IE++ +F+ RD VSWTA++SGY
Sbjct: 325 RLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGY 384
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
+ ++ ++ M + G+ PDE+T+ VLSACS ++ G + E+ K+ G+
Sbjct: 385 ENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEV-AKQKGLVSY 443
Query: 412 HDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIH 457
+ID+ ++ +++A + + + W +++ RI+
Sbjct: 444 SIVANSLIDMYAKCKCIDKALEIFHST-LEKNIVSWTSIILGLRIN 488
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 161/296 (54%), Gaps = 9/296 (3%)
Query: 159 IDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDM 218
+D E+R+ ++ + +++ C A +EG ++++++ + ++ +G+AL+ M
Sbjct: 94 LDSMHELRI---PVEDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNALLSM 150
Query: 219 YCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
+ + ++ A VF M +N+ SW ++ GY + G +EA+ ++ M G++PD +T
Sbjct: 151 FVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTF 210
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
V+ +C + +L G + H + G S + V NAL+T Y KCG++ + +F++M
Sbjct: 211 PCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPN 270
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH- 397
RD +SW A++SGY + G E + LF M+ + + PD +T+ V++AC G GR
Sbjct: 271 RDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQI 330
Query: 398 YFEIMVKEYGIRP-IHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ ++ E+G P IH+ +I + S G +EEA++ ++ D + W ++S
Sbjct: 331 HGYVLRTEFGRDPSIHNS---LIPMYSSVGLIEEAETVFSRTEC-RDLVSWTAMIS 382
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 2/199 (1%)
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVS 313
G + A+ +M I +D ++I C + +EG++ + ++ + +
Sbjct: 85 GNLDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLG 144
Query: 314 NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLK 373
NAL++ + + GN+ D+ +F M R+ SW LV GYAK G +E +DL+ +ML G+K
Sbjct: 145 NALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVK 204
Query: 374 PDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKS 433
PD T VL C + +GR + V YG D +I + + G + A+
Sbjct: 205 PDVYTFPCVLRTCGGMPNLVRGRE-IHVHVIRYGFESDVDVVNALITMYVKCGDVNTARL 263
Query: 434 FINKMPFPPDAIGWATLLS 452
+KMP D I W ++S
Sbjct: 264 VFDKMP-NRDRISWNAMIS 281
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/651 (35%), Positives = 372/651 (57%), Gaps = 39/651 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D +SWN L++ + G DA+ + M+ G +++ +TF++ L + +
Sbjct: 412 MPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG-KSVNYVTFTSALAACFTPDFFEK 470
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +HG ++ G +G+ LV MY K+G +
Sbjct: 471 GRILHGLVVVSGLFYNQIIGNALVSMYGKIGEM--------------------------- 503
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
ESRR+ M +D ++W +I G ++ +A+ F+ MR+EG++ + T SV
Sbjct: 504 ----SESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSV 559
Query: 181 LTAC---GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
L+AC G LL E GK +HA+I+ + + V ++L+ MY KC + ++ +F +
Sbjct: 560 LSACLLPGDLL--ERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDN 617
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
+N+++W AML +G EE +K+ M+ G+ D F+ +S+ A LA LEEG Q
Sbjct: 618 RNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL 677
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
HG ++ G + NA Y KCG I + ++ R SW L+S + G
Sbjct: 678 HGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYF 737
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
E F +ML G+KP VT + +L+ACS GLV+KG Y++++ +++G+ P +H C
Sbjct: 738 EEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCIC 797
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
+ID+L R+GRL EA++FI+KMP P+ + W +LL+SC+IHGN++ G+ AAE+L +L+P +
Sbjct: 798 VIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPED 857
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
+ YVL S+++A+ G+W+ V +R+ M K ++K CSW+K K +V F D + P +
Sbjct: 858 DSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQT 917
Query: 538 DQIYAELEKLNRKMIKE-GYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGL 596
+IYA+LE + +K+IKE GYV D S L D + +K L +HSE+LA+A+ L+ P G
Sbjct: 918 MEIYAKLEDI-KKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGS 976
Query: 597 PIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+R+ KNLR+CSDCH+ K++S++ R I++RD RFH F+ G CSC D+W
Sbjct: 977 TVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 1027
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 127/507 (25%), Positives = 235/507 (46%), Gaps = 48/507 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSWN ++SG G + ++ + M G+ S + S + S
Sbjct: 133 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 192
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+HG + K G S V+V + ++ +Y GL+ +++ F+E+P++N+V + +++ G
Sbjct: 193 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 252
Query: 121 RGLVEE---------------------------------------------SRRLFRGMK 135
+G EE + +F M
Sbjct: 253 KGEPEEVIDIYKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS 312
Query: 136 DKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQ 195
++D+ISW ++ QNG E+ +F MR ++ T ++L+ G + + G+
Sbjct: 313 ERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRG 372
Query: 196 IHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGC 255
IH +++ V V + L+ MY A VF+ M K+++SW +++ + +G
Sbjct: 373 IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGR 432
Query: 256 SEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNA 315
S +A+ + C+M +G + T S +++C E+G HG +V+GL + NA
Sbjct: 433 SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA 492
Query: 316 LVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPD 375
LV+ YGK G + +S R+ +M RD V+W AL+ GYA+ ++ + F+ M G+ +
Sbjct: 493 LVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSN 552
Query: 376 EVTLIGVLSACSRAG-LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSF 434
+T++ VLSAC G L+E+G+ +V G +I + ++ G L ++
Sbjct: 553 YITVVSVLSACLLPGDLLERGKPLHAYIVSA-GFESDEHVKNSLITMYAKCGDLSSSQDL 611
Query: 435 INKMPFPPDAIGWATLLSSCRIHGNVE 461
N + + I W +L++ HG+ E
Sbjct: 612 FNGLD-NRNIITWNAMLAANAHHGHGE 637
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 179/352 (50%), Gaps = 36/352 (10%)
Query: 107 NIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR 166
+++ NT+I + G V+ +R LF M ++ +SW TM++G+++ GL E ++ FR+M
Sbjct: 106 SVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMC 165
Query: 167 LEGLAMDQFTFGSVLTACGGLLAL-EEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI 225
G+ F S++TACG ++ EG Q+H F+ ++ +V+V +A++ +Y +
Sbjct: 166 DLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLV 225
Query: 226 KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
+ VF M +NVVSWT+++VGY G EE + I+ D +LG
Sbjct: 226 SCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY----------KDESLGR----- 270
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
Q G+ + +GL S + V N+L++ G GN++ ++ +F++M+ RD +SW
Sbjct: 271 ----------QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWN 320
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE 405
++ + YA+ G E+ +F M + + T+ +LS + GR ++VK
Sbjct: 321 SIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK- 379
Query: 406 YGIRPIHDHYTCMIDILSR----AGRLEEAKSFINKMPFPPDAIGWATLLSS 453
G D C+ + L R AGR EA +MP D I W +L++S
Sbjct: 380 MGF----DSVVCVCNTLLRMYAGAGRSVEANLVFKQMP-TKDLISWNSLMAS 426
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 139/285 (48%), Gaps = 16/285 (5%)
Query: 193 GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
G+ +HA ++ + +V + L++MY K +K A +F M +N VSW M+ G +
Sbjct: 91 GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150
Query: 253 NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASL-EEGTQFHGRSLVTGLISFIT 311
G E ++ F M GI+P F + S++++C S+ EG Q HG +GL+S +
Sbjct: 151 VGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 210
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE------ 365
VS A++ YG G + S ++F EM R+ VSWT+L+ GY+ G+ E ID+++
Sbjct: 211 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKDESLGR 270
Query: 366 ----KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
+++ GL+ ++S G V+ + F+ M + I + +
Sbjct: 271 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTIS-----WNSIAAA 325
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWA 466
++ G +EE+ + M D + T+ + + G+V+ KW
Sbjct: 326 YAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWG 370
>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g52630-like [Cucumis
sativus]
Length = 598
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/600 (39%), Positives = 353/600 (58%), Gaps = 33/600 (5%)
Query: 49 LIMSSSR-RCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKN 107
L++S +R R + G Q+H HILKFG + V L+++Y+K L + + FDE P+K+
Sbjct: 31 LLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKS 90
Query: 108 IVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL 167
S +W+++I+ QN A+ FR M
Sbjct: 91 -------------------------------STTWSSVISAFAQNEAPLLALQFFRRMLN 119
Query: 168 EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY 227
+G+ D + S ACG L + GK +H ++ + +VFVGS+LVDMY KC I
Sbjct: 120 DGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGD 179
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN 287
A +F M +NVVSW+ M+ GY Q EA+ +F ++ +DFT SVI C++
Sbjct: 180 ARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSS 239
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
LE G HG L S V +AL++ Y KCG IE ++++F+E+ R+ W ++
Sbjct: 240 STFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSM 299
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYG 407
+ A+ LFE+M + G+KP+ + + VL ACS AGLVEKGR YF +M ++YG
Sbjct: 300 LIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYFSLM-RDYG 358
Query: 408 IRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAA 467
I P +HY ++D+L RAG+L+EA S I +MP P W LL+ CRIH + E+ + A
Sbjct: 359 IEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVA 418
Query: 468 ESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF 527
+ +LE+D + +VLLS+ YA+ G+++ +++R+ +R++GV+K+ G SW++ ++VH F
Sbjct: 419 DRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTF 478
Query: 528 SADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAF 587
+A D S +IY +LE+L +M K GYV D S VL V+ EK + + +HSE+LAIAF
Sbjct: 479 TAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAF 538
Query: 588 GLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
GL+ PPG PIRV+KNLRVC DCH A K++SK R ++VRD RFH F++G+CSCGD+W
Sbjct: 539 GLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 169/350 (48%), Gaps = 33/350 (9%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P +W+ +IS A + + A++ + ML DG+ I S RR D+G
Sbjct: 87 PKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRS-DVG 145
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+ +H +K G+ VFVGS LVDMYAK G I DA+ FDE+PE+N+V
Sbjct: 146 KSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVV------------ 193
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
SW+ MI G Q EA+ LF++ +E + ++ FTF SV+
Sbjct: 194 -------------------SWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVI 234
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
C LE GK IH ++ + FVGSAL+ +Y KC I+ A VF + +N+
Sbjct: 235 RVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLG 294
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
W +ML+ Q+ ++ +F M G++P+ SV+ +C++ +E+G ++
Sbjct: 295 LWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYFSLM 354
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
G+ +LV G+ G ++++ + +M +R E W AL++G
Sbjct: 355 RDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTG 404
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 119/250 (47%), Gaps = 33/250 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW+ +I G+A +A+ ++ L + + +++ TFS+++ + SS ++L
Sbjct: 187 MPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDV-DVNDFTFSSVIRVCSSSTFLEL 245
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ IHG LK F S FVGS L+ +Y+K G+I A + FDE+P +N+ GL
Sbjct: 246 GKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNL--------GL-- 295
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
W +M+ Q+ + LF EM G+ + F SV
Sbjct: 296 ---------------------WNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSV 334
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC +E+G++ + + + ++LVD+ + ++ A SV + M +
Sbjct: 335 LYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPT 394
Query: 241 VS-WTAMLVG 249
S W A+L G
Sbjct: 395 ESVWGALLTG 404
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 106/239 (44%), Gaps = 12/239 (5%)
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
+ +N E + + +++ S SL +G Q H L GL + VS+ L+ Y K
Sbjct: 16 LNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQL 75
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
S ++F+E + +W++++S +A+ + F +ML+ G++PD+ A
Sbjct: 76 PLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKA 135
Query: 386 CS--RAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPD 443
C R V K H + Y + + ++D+ ++ G + +A+ ++MP +
Sbjct: 136 CGFLRRSDVGKSVHCLAVKTGYYCDVFVG---SSLVDMYAKCGEIGDARHLFDEMP-ERN 191
Query: 444 AIGWATLL-SSCRIHGNVEIGKWAAESLLELDPYNPASY-----VLLSSIYASKGKWDH 496
+ W+ ++ ++ VE ++L+E N ++ V SS + GK H
Sbjct: 192 VVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIH 250
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/650 (35%), Positives = 359/650 (55%), Gaps = 40/650 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D +SWN +++ H G + A+ + MLK ++ +TF+T L C +L
Sbjct: 513 MPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKA-MNYVTFTTAL-----SACYNL 566
Query: 61 GRQ--IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
+ +H ++ F + +G+ LV MY K
Sbjct: 567 EKLKIVHAFVIHFAVHHNLIIGNTLVTMYGKF---------------------------- 598
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
GL++E++++ + M ++D ++W +I G + I F MR EGL + T
Sbjct: 599 ---GLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIV 655
Query: 179 SVLTACGGL-LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
++L C L+ G IHA I+ + + +V S+L+ MY +C + + +F +A
Sbjct: 656 NLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLAN 715
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
KN +W A+ G EEA+K M+ +G++ D F+ +++ NL L+EG Q
Sbjct: 716 KNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQL 775
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H + G V NA + YGKCG I+D R+ +R + SW L+S A+ G
Sbjct: 776 HSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHGFF 835
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
+ + F +ML GLKPD VT + +LSACS GLV++G YF M E+G+ +H C
Sbjct: 836 RQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVC 895
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
+ID+L R+GRL EA+ FI+KMP PP+ W +LL++C++HGN+E+G+ AA+ L EL+ +
Sbjct: 896 IIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFELNSSD 955
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
++YVL S++ AS +W V +R+ M + ++K P CSWIK K++V F D P S
Sbjct: 956 DSAYVLYSNVCASTQRWGDVENVRKQMESQSLKKKPACSWIKLKNKVMTFGMGDQFHPQS 1015
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
QIYA+LE+L + +EG++PD S L D + +K L +HSE++A+AFGL+ G P
Sbjct: 1016 AQIYAKLEELRKMTREEGHMPDTSYALQDTDEEQKEHNLWNHSERIALAFGLINSAEGSP 1075
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+R+ KNLRVC DCH+ K +SKI R+I+VRD+ RFH F G+CSC D+W
Sbjct: 1076 LRIFKNLRVCGDCHSVFKLVSKIVGRKIVVRDSYRFHHFHGGKCSCSDYW 1125
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 205/394 (52%), Gaps = 26/394 (6%)
Query: 97 KRGFDELPE------------KNIVMYNTMITGLL-----RRGLVEESRRLFRGMKDKDS 139
++GF E+ E K+++ NT T L + G ++ ++ +F M D++
Sbjct: 154 QKGFSEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRND 213
Query: 140 ISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEG-KQIHA 198
SW MI+G ++ G +A+ F M G+ + S++TAC + EG +QIH
Sbjct: 214 ASWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHG 273
Query: 199 FIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEE 258
++++ NVFVG++L+ Y S+ A +F + N+VSWT+++V Y NG ++E
Sbjct: 274 YVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKE 333
Query: 259 AVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL-ISFITVSNALV 317
+ I+ +++ NG+ T+ +VI +C G Q G + +GL S ++V+N+L+
Sbjct: 334 VLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLI 393
Query: 318 TFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEV 377
+ +G ++E++ R+FN M RD +SW ++++ A G+ E++ F M K D +
Sbjct: 394 SMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYI 453
Query: 378 TLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINK 437
T+ +L AC A ++ GR ++ K G+ ++ + ++AG E+A+ +
Sbjct: 454 TISALLPACGSAQHLKWGRGLHGLITKS-GLESNVCVCNSLLSMYAQAGSSEDAELVFHT 512
Query: 438 MPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL 471
MP D I W ++++S +VE GK++ LL
Sbjct: 513 MP-ARDLISWNSMMAS-----HVEDGKYSHAILL 540
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 213/450 (47%), Gaps = 41/450 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
+ SWN +ISG G + A++ + M ++G+ S + S + S + RQI
Sbjct: 212 NDASWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQI 271
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG+++K G S VFVG+ L+ Y G + +A + F+E+ E NIV
Sbjct: 272 HGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIV--------------- 316
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
SWT+++ NG +E ++++R +R GL T +V+ C
Sbjct: 317 ----------------SWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTC 360
Query: 185 GGLLALEEGKQIHAFIIRND-HKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
G G QI +I++ +V V ++L+ M+ S++ A VF M ++ +SW
Sbjct: 361 GMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISW 420
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
+++ NG EE++ F M+R + D T+ +++ +C + L+ G HG
Sbjct: 421 NSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITK 480
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
+GL S + V N+L++ Y + G+ ED+ +F+ M RD +SW ++++ + + GK + I L
Sbjct: 481 SGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILL 540
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR--HYFEIMVKEYGIRPIHDHYTCMIDI 421
+ML + VT LSAC +EK + H F I + I + ++ +
Sbjct: 541 LVEMLKTRKAMNYVTFTTALSACYN---LEKLKIVHAFVIHFAVHHNLIIGN---TLVTM 594
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
+ G ++EA+ MP D + W L+
Sbjct: 595 YGKFGLMDEAQKVCKIMP-ERDVVTWNALI 623
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 183/384 (47%), Gaps = 42/384 (10%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGL---GNLSRITFSTMLIMSSSRRCVDLGRQ 63
VSW L+ +A +G + + +Y + +GL GN T +T++ +G Q
Sbjct: 316 VSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGN----TMATVIRTCGMFGDKTMGYQ 371
Query: 64 IHGHILKFGFG-SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
I G ++K G S V V + L+ M+ YD+
Sbjct: 372 ILGDVIKSGLDTSSVSVANSLISMFGN----YDS-------------------------- 401
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
VEE+ R+F M+++D+ISW ++IT NG E++ F MR D T ++L
Sbjct: 402 -VEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLP 460
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
ACG L+ G+ +H I ++ + NV V ++L+ MY + S + AE VF TM ++++S
Sbjct: 461 ACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLIS 520
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL 302
W +M+ + ++G A+ + M + + T + +S+C NL L+ H +
Sbjct: 521 WNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKLK---IVHAFVI 577
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
+ + + N LVT YGK G ++++ ++ M RD V+W AL+ G+A N TI
Sbjct: 578 HFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQ 637
Query: 363 LFEKMLSHGLKPDEVTLIGVLSAC 386
F M GL + +T++ +L C
Sbjct: 638 AFNLMRREGLLSNYITIVNLLGTC 661
>gi|414876780|tpg|DAA53911.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 491
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 209/490 (42%), Positives = 321/490 (65%)
Query: 158 AIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVD 217
A+ LFREM+ F S+L+ G L ++ G+QIHA +I F+G+AL+D
Sbjct: 2 ALQLFREMQTLSFDRHTLPFASLLSVAGALPDIKIGRQIHAQLILLGLTLEDFMGNALID 61
Query: 218 MYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFT 277
MY KC + A+++F + K +SWTA++ G QNG EEA+++FCNM+R G+ PD T
Sbjct: 62 MYSKCGMLDAAKTIFANKSDKTAISWTALITGCVQNGQHEEALQLFCNMRRAGLSPDRAT 121
Query: 278 LGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN 337
S+I S ++L + G Q H +G +S + +AL+ Y KCG ++++ R FNEM
Sbjct: 122 CSSIIKSSSSLGVIGIGRQLHAYLTTSGHMSSVFSGSALLDMYAKCGCLDEAIRTFNEMP 181
Query: 338 VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH 397
++ ++W A++S YA++G+A I +F+ ML G PD VT + VL+ACS GL E+
Sbjct: 182 EKNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGFCPDPVTFLSVLAACSHNGLAEECMK 241
Query: 398 YFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIH 457
YF++M + P +HY+C+ID L RAG ++ + +++MPF D + W+++L SCRI+
Sbjct: 242 YFDLMRYYNSMSPWKEHYSCVIDALGRAGCFDKIQKVLDEMPFEADPVIWSSILHSCRIY 301
Query: 458 GNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSW 517
GN ++ AAE+L + P + +YV+LS+IYA G W+ +++++ MR++GVRK+ G SW
Sbjct: 302 GNQDLATVAAENLFTMVPTDATAYVILSNIYAKAGNWEGAARVKKIMRDRGVRKESGNSW 361
Query: 518 IKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLN 577
++ K ++++FS++D ++P D+I ELE+L +M K+GY PD S LH V+ +K++ L
Sbjct: 362 VEIKQKIYMFSSNDHTNPMIDEIKEELERLYEEMDKQGYEPDTSCALHMVDNKQKLESLK 421
Query: 578 HHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFK 637
+HSE+LAIAF L+ PPG PI V+KNL C DCH A K ISKI R+I+VRD+ RFH FK
Sbjct: 422 YHSERLAIAFALINTPPGTPITVMKNLSACLDCHAAIKMISKIVNRDIIVRDSRRFHHFK 481
Query: 638 NGECSCGDFW 647
+G CSCGD+W
Sbjct: 482 DGFCSCGDYW 491
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 117/439 (26%), Positives = 203/439 (46%), Gaps = 72/439 (16%)
Query: 43 ITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDE 102
+ F+++L ++ + + +GRQIH ++ G F+G+ L+DMY+K G++
Sbjct: 19 LPFASLLSVAGALPDIKIGRQIHAQLILLGLTLEDFMGNALIDMYSKCGML--------- 69
Query: 103 LPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLF 162
+ ++ +F DK +ISWT +ITG +QNG EA+ LF
Sbjct: 70 ----------------------DAAKTIFANKSDKTAISWTALITGCVQNGQHEEALQLF 107
Query: 163 REMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC 222
MR GL+ D+ T S++ + L + G+Q+HA++ + H +VF GSAL+DMY KC
Sbjct: 108 CNMRRAGLSPDRATCSSIIKSSSSLGVIGIGRQLHAYLTTSGHMSSVFSGSALLDMYAKC 167
Query: 223 KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
+ A F M KN ++W A++ Y Q G ++ A+++F +M G PD T SV+
Sbjct: 168 GCLDEAIRTFNEMPEKNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGFCPDPVTFLSVL 227
Query: 283 SSCANLASLEEGTQF-----HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN 337
++C++ EE ++ + S+ + V +AL G+ G + ++ +EM
Sbjct: 228 AACSHNGLAEECMKYFDLMRYYNSMSPWKEHYSCVIDAL----GRAGCFDKIQKVLDEMP 283
Query: 338 VR-DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSAC-SRAG----- 390
D V W++++ +G + E + + + P + T +LS ++AG
Sbjct: 284 FEADPVIWSSILHSCRIYGNQDLATVAAENLFT--MVPTDATAYVILSNIYAKAGNWEGA 341
Query: 391 ------------LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
E G + EI K Y +DH MID + LE ++K
Sbjct: 342 ARVKKIMRDRGVRKESGNSWVEIKQKIYMFSS-NDHTNPMIDEIKE--ELERLYEEMDKQ 398
Query: 439 PFPPDAIGWATLLSSCRIH 457
+ PD +SC +H
Sbjct: 399 GYEPD--------TSCALH 409
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 92/165 (55%), Gaps = 5/165 (3%)
Query: 6 GVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIH 65
+SW LI+G +G +A++++ M + GL R T S+++ SSS + +GRQ+H
Sbjct: 84 AISWTALITGCVQNGQHEEALQLFCNMRRAGLSP-DRATCSSIIKSSSSLGVIGIGRQLH 142
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
++ G S VF GS L+DMYAK G + +A R F+E+PEKN + +N +I+ + G +
Sbjct: 143 AYLTTSGHMSSVFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISAYAQYGQAK 202
Query: 126 ESRRLFRGMKD----KDSISWTTMITGLMQNGLEREAIDLFREMR 166
+ R+F M D +++ +++ NGL E + F MR
Sbjct: 203 NAIRMFDSMLHCGFCPDPVTFLSVLAACSHNGLAEECMKYFDLMR 247
>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Brachypodium distachyon]
Length = 642
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/596 (39%), Positives = 347/596 (58%), Gaps = 47/596 (7%)
Query: 61 GRQIHGHI------LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTM 114
GR IH H+ +FV + LV MYAK G++ DA F +P++N+V
Sbjct: 85 GRAIHRHVSLCAHGGGGATHGSLFVSNSLVSMYAKFGMLDDALELFGGMPQRNVV----- 139
Query: 115 ITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQN-GLEREAIDLFREMRLEGLAMD 173
SWTT++ L G ++EA+ EMR +G+A +
Sbjct: 140 --------------------------SWTTVVAALANAPGRKKEALRFLVEMRRDGVAAN 173
Query: 174 QFTFGSVLTACG--GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
+TF SVL ACG G+LA +HA II+ +VFV S+L+D Y K + V
Sbjct: 174 SYTFSSVLGACGTPGVLA-----AMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGRGV 228
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASL 291
F M ++V W +++ G+ Q+G A+++F M+ +G + TL SV+ +C + L
Sbjct: 229 FDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGMVML 288
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
E G Q H V + + NAL+ Y KCG + D+ LF+ M+ RD +SW+ ++SG
Sbjct: 289 EVGRQVHAH--VLKYDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMISGL 346
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
A+ G++ E + +F+ M + G P+ +T++GVL ACS AGLVE G HYF M K +GI+P
Sbjct: 347 AQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGIQPE 406
Query: 412 HDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL 471
+H CM+D+L RAG+L+EA FI +M F PD++ W TLL +CR+H N + +AA +L
Sbjct: 407 REHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMHKNATLASYAATEIL 466
Query: 472 ELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADD 531
+L+P + + +LLS+IYA +W + + +TMR++GV+K+PG SWI+ VH+F A +
Sbjct: 467 KLEPEDQGARILLSNIYADLRQWSNAEKSWKTMRDQGVKKEPGRSWIELGKLVHVFIAGE 526
Query: 532 WSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLF 591
S P SD+I EL +L R+ GYVP VL D+ +K +L +HSEKLAIAFG +
Sbjct: 527 LSHPCSDRIVQELNRLIRRAKDLGYVPQTEFVLQDLGTEQKEDLLKYHSEKLAIAFGTMN 586
Query: 592 IPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G P+R++KNLR+C DCH K +SK + I++RD VRFH F++G CSCGD+W
Sbjct: 587 SMEGKPVRIMKNLRICGDCHAFAKLVSKTEGKAIIIRDPVRFHHFQHGVCSCGDYW 642
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 189/379 (49%), Gaps = 42/379 (11%)
Query: 1 MPFHDGVSWNLLISGHA-SHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
MP + VSW +++ A + G +A++ M +DG+ S TFS++L + +
Sbjct: 133 MPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRRDGVAANS-YTFSSVLGACGTPGVL- 190
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+H I+K G S VFV S L+D Y KLG + + FDE M+T
Sbjct: 191 --AAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGRGVFDE-----------MVTC-- 235
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
D + W ++I G Q+G A++LF M+ G +Q T S
Sbjct: 236 ------------------DLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTS 277
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL AC G++ LE G+Q+HA +++ D ++ + +AL+DMYCKC + A+++F M ++
Sbjct: 278 VLRACTGMVMLEVGRQVHAHVLKYDR--DLILHNALLDMYCKCGCLLDADALFSRMHDRD 335
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FH 298
V+SW+ M+ G QNG S EA+K+F M+ G P++ T+ V+ +C++ +E+G F
Sbjct: 336 VISWSTMISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFR 395
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKA 357
+ G+ N +V G+ G ++++ + EM D V W L+ G + K
Sbjct: 396 SMDKLFGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLL-GACRMHK- 453
Query: 358 NETIDLFEKMLSHGLKPDE 376
N T+ + L+P++
Sbjct: 454 NATLASYAATEILKLEPED 472
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/651 (35%), Positives = 372/651 (57%), Gaps = 39/651 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D +SWN L++ + G DA+ + M+ G +++ +TF++ L + +
Sbjct: 322 MPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG-KSVNYVTFTSALAACFTPDFFEK 380
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +HG ++ G +G+ LV MY K+G +
Sbjct: 381 GRILHGLVVVSGLFYNQIIGNALVSMYGKIGEM--------------------------- 413
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
ESRR+ M +D ++W +I G ++ +A+ F+ MR+EG++ + T SV
Sbjct: 414 ----SESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSV 469
Query: 181 LTAC---GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
L+AC G LL E GK +HA+I+ + + V ++L+ MY KC + ++ +F +
Sbjct: 470 LSACLLPGDLL--ERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDN 527
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
+N+++W AML +G EE +K+ M+ G+ D F+ +S+ A LA LEEG Q
Sbjct: 528 RNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL 587
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
HG ++ G + NA Y KCG I + ++ R SW L+S + G
Sbjct: 588 HGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYF 647
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
E F +ML G+KP VT + +L+ACS GLV+KG Y++++ +++G+ P +H C
Sbjct: 648 EEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCIC 707
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
+ID+L R+GRL EA++FI+KMP P+ + W +LL+SC+IHGN++ G+ AAE+L +L+P +
Sbjct: 708 VIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPED 767
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
+ YVL S+++A+ G+W+ V +R+ M K ++K CSW+K K +V F D + P +
Sbjct: 768 DSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQT 827
Query: 538 DQIYAELEKLNRKMIKE-GYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGL 596
+IYA+LE + +K+IKE GYV D S L D + +K L +HSE+LA+A+ L+ P G
Sbjct: 828 MEIYAKLEDI-KKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGS 886
Query: 597 PIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+R+ KNLR+CSDCH+ K++S++ R I++RD RFH F+ G CSC D+W
Sbjct: 887 TVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/466 (26%), Positives = 220/466 (47%), Gaps = 43/466 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLG----NLSRITFSTMLIMSSSRR 56
MP + VSW L+ G++ G + + +Y M +G+G ++S + S L+ S
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDES-- 177
Query: 57 CVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMIT 116
LGRQI G ++K G E + + N++I+
Sbjct: 178 ---LGRQIIGQVVKSGL-------------------------------ESKLAVENSLIS 203
Query: 117 GLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
L G V+ + +F M ++D+ISW ++ QNG E+ +F MR ++ T
Sbjct: 204 MLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTT 263
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
++L+ G + + G+ IH +++ V V + L+ MY A VF+ M
Sbjct: 264 VSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 323
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
K+++SW +++ + +G S +A+ + C+M +G + T S +++C E+G
Sbjct: 324 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRI 383
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
HG +V+GL + NALV+ YGK G + +S R+ +M RD V+W AL+ GYA+
Sbjct: 384 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED 443
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG-LVEKGRHYFEIMVKEYGIRPIHDHY 415
++ + F+ M G+ + +T++ VLSAC G L+E+G+ +V G
Sbjct: 444 PDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA-GFESDEHVK 502
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+I + ++ G L ++ N + + I W +L++ HG+ E
Sbjct: 503 NSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGE 547
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 214/451 (47%), Gaps = 33/451 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSWN ++SG G + ++ + M G+ S + S + S
Sbjct: 18 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 77
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+HG + K G S V+V + ++ +Y +Y
Sbjct: 78 GVQVHGFVAKSGLLSDVYVSTAILHLYG----VY-------------------------- 107
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GLV SR++F M D++ +SWT+++ G G E ID+++ MR EG+ ++ + V
Sbjct: 108 -GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLV 166
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+++CG L G+QI ++++ + + V ++L+ M ++ YA +F M+ ++
Sbjct: 167 ISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDT 226
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SW ++ Y QNG EE+ +IF M+R E + T+ +++S ++ + G HG
Sbjct: 227 ISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGL 286
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ G S + V N L+ Y G +++ +F +M +D +SW +L++ + G++ +
Sbjct: 287 VVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDA 346
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ L M+S G + VT L+AC EKGR ++V G+ ++
Sbjct: 347 LGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVS-GLFYNQIIGNALVS 405
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
+ + G + E++ + +MP D + W L+
Sbjct: 406 MYGKIGEMSESRRVLLQMP-RRDVVAWNALI 435
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 182/337 (54%), Gaps = 11/337 (3%)
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G V+ +R LF M ++ +SW TM++G+++ GL E ++ FR+M G+ F S++
Sbjct: 6 GRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLV 65
Query: 182 TACGGLLAL-EEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
TACG ++ EG Q+H F+ ++ +V+V +A++ +Y + + VF M +NV
Sbjct: 66 TACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNV 125
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWT+++VGY G EE + I+ M+ G+ ++ ++ VISSC L G Q G+
Sbjct: 126 VSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQ 185
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ +GL S + V N+L++ G GN++ ++ +F++M+ RD +SW ++ + YA+ G E+
Sbjct: 186 VVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEES 245
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+F M + + T+ +LS + GR ++VK G D C+ +
Sbjct: 246 FRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK-MGF----DSVVCVCN 300
Query: 421 ILSR----AGRLEEAKSFINKMPFPPDAIGWATLLSS 453
L R AGR EA +MP D I W +L++S
Sbjct: 301 TLLRMYAGAGRSVEANLVFKQMP-TKDLISWNSLMAS 336
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 126/245 (51%), Gaps = 3/245 (1%)
Query: 218 MYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFT 277
MY K +K A +F M +N VSW M+ G + G E ++ F M GI+P F
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 278 LGSVISSCANLASL-EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
+ S++++C S+ EG Q HG +GL+S + VS A++ YG G + S ++F EM
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 337 NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR 396
R+ VSWT+L+ GY+ G+ E ID+++ M G+ +E ++ V+S+C GR
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 397 HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRI 456
+VK G+ +I +L G ++ A ++M D I W ++ ++
Sbjct: 181 QIIGQVVKS-GLESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQ 238
Query: 457 HGNVE 461
+G++E
Sbjct: 239 NGHIE 243
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 39/198 (19%)
Query: 319 FYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVT 378
Y K G ++ + LF+ M VR+EVSW ++SG + G E ++ F KM G+KP
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 379 LIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
+ +++AC R+G + F V+ +G F+ K
Sbjct: 61 IASLVTACGRSGSM------FREGVQVHG--------------------------FVAKS 88
Query: 439 PFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVS 498
D +L ++G V + E E+ N S+ L Y+ KG+ + V
Sbjct: 89 GLLSDVYVSTAILHLYGVYGLVSCSRKVFE---EMPDRNVVSWTSLMVGYSDKGEPEEVI 145
Query: 499 QLRRTMREKGVRKDPGCS 516
+ + MR +GV GC+
Sbjct: 146 DIYKGMRGEGV----GCN 159
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/641 (36%), Positives = 346/641 (53%), Gaps = 65/641 (10%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V +N++I + ++ +A+ ++ +ML N TF +L S + +G Q+H
Sbjct: 103 VFFNVMIRSYVNNNLYVEALSIFQVMLSCAF-NPDHYTFPCVLKACSGLDNLRVGLQVHD 161
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
I+K G + +F+G+ LV MY K G + E
Sbjct: 162 AIVKVGLDTNLFIGNALVAMYGKCGCL-------------------------------RE 190
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+R++ M +D +SW +M+ G Q+G +A+++ +EM L D T S+
Sbjct: 191 ARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASL------ 244
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+ V Y ++++Y ++F M KN++SW M
Sbjct: 245 ---------------------------SPVVCYTSLENVQYIHNMFERMTKKNLISWNVM 277
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ Y N EAV +F M+ G++PD T+ S++ +C +L++L G + H L
Sbjct: 278 IAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNL 337
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ + NAL+ Y KCG +E++ +F++M +RD VSWT+++S Y + G+ + + LF K
Sbjct: 338 QPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAK 397
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
ML G PD + + VLSACS GL+++GRHYF +M ++YGI P +H+ CM+D+ RAG
Sbjct: 398 MLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAG 457
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+EEA SFI +MP P+ W LLS+CR+H ++IG AA+ L +L P YVLLS+
Sbjct: 458 EVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSN 517
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IYA G W V +R M++ G++K PG S ++ +VH F A D P + IY EL+
Sbjct: 518 IYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDV 577
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
L KM + GY+P S LHDVE+ +K L HSEKLAI F +L G PIR+ KNLRV
Sbjct: 578 LVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRV 637
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCH A K ISKI R I+VRD RFH F NG CSCGD+W
Sbjct: 638 CGDCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 163/345 (47%), Gaps = 39/345 (11%)
Query: 113 TMITGLLR----RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE 168
T+ L+R +G +R +F +K+ + + MI + N L EA+ +F+ M
Sbjct: 72 TLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSC 131
Query: 169 GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYA 228
D +TF VL AC GL L G Q+H I++ N+F+G+ALV MY KC ++ A
Sbjct: 132 AFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREA 191
Query: 229 ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL 288
V M +++VVSW +M+ GY Q+G ++A++I M + D T+ S+
Sbjct: 192 RKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASL------- 244
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
+ V Y N++ H +F M ++ +SW ++
Sbjct: 245 --------------------------SPVVCYTSLENVQYIHNMFERMTKKNLISWNVMI 278
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
+ Y NE + LF +M G+KPD VT+ +L AC + GR + +++ +
Sbjct: 279 AIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHK-YIEKGNL 337
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+P ++D+ ++ G LEEA+ +KM D + W +++S+
Sbjct: 338 QPNLLLENALLDMYAKCGCLEEARDVFDKMRL-RDVVSWTSMMSA 381
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 141/301 (46%), Gaps = 24/301 (7%)
Query: 195 QIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQN 253
++H+ I+ N+H + + + L+ Y A +F KNVV + M+ Y N
Sbjct: 56 KLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNN 115
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVS 313
EA+ IF M PD +T V+ +C+ L +L G Q H + GL + + +
Sbjct: 116 NLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIG 175
Query: 314 NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLK 373
NALV YGKCG + ++ ++ ++M RD VSW ++V+GYA+ G+ ++ +++ ++M S L
Sbjct: 176 NALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLN 235
Query: 374 PDEVTLIGVLSACSRAGL--VEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEA 431
D T+ + L V+ + FE M K+ I + MI I EA
Sbjct: 236 HDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLIS-----WNVMIAIYVNNSMPNEA 290
Query: 432 KSFINKMP---FPPDAIGWATLLSSC----------RIHGNVEIGKWAAESLLE---LDP 475
S +M PDA+ A+LL +C R+H +E G LLE LD
Sbjct: 291 VSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDM 350
Query: 476 Y 476
Y
Sbjct: 351 Y 351
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/643 (35%), Positives = 366/643 (56%), Gaps = 33/643 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D +SWN +ISG +S+G ++A++++ M G L +T ++L + R
Sbjct: 478 MPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQG-QELDSVTLLSVLPACAQSRYWFA 536
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +HG+ +K G + + L+DMY+
Sbjct: 537 GRVVHGYSVKTGLIGETSLANALLDMYSNCSDW--------------------------- 569
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ + ++FR M K+ +SWT MIT M+ GL + L +EM L+G+ D F S
Sbjct: 570 ----QSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSA 625
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A G +L++GK +H + IRN + + V +AL++MY KC++++ A +F + K+V
Sbjct: 626 LHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDV 685
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SW ++ GY +N E+ +F +M P+ T+ ++ + A+++SLE G + H
Sbjct: 686 ISWNTLIGGYSRNNFPNESFSLFSDMLLQ-FRPNAVTMTCILPAAASISSLERGREIHAY 744
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+L G + SNALV Y KCG + + LF+ + ++ +SWT +++GY G
Sbjct: 745 ALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHA 804
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
I LFE+M G++PD + +L AC +GL +GR +F+ M KEY I P HYTC++D
Sbjct: 805 IALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVD 864
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+LSR G L+EA FI MP PD+ W +LL CRIH NV++ + A+ + +L+P N
Sbjct: 865 LLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGY 924
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLL++IYA +W+ V +L+ + +G+R++ G SWI+ +S+VH+F AD+ + P ++I
Sbjct: 925 YVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGYSWIEVRSKVHVFIADNRNHPDWNRI 984
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
L+ + R+M +EG+ P L + + + L HS KLA+AFG+L +P G PIRV
Sbjct: 985 AEFLDDVARRMRQEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLPEGRPIRV 1044
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSC 643
KN +VCS CH A K+ISK+ REI++RD+ RFH F+ G CSC
Sbjct: 1045 TKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHRFEGGRCSC 1087
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 221/454 (48%), Gaps = 43/454 (9%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WNL++ G+A G +++ ++ M + G+ S +L + C G HG+I
Sbjct: 385 WNLIMGGYAKVGEFEESLSLFVQMHELGIAP-DEHAISCLLKCITCLSCARDGLVAHGYI 443
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+K GFG+ V + L+ YAK +I DA F+ +P +
Sbjct: 444 VKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQ---------------------- 481
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
D+ISW ++I+G NGL EAI+LF M +G +D T SVL AC
Sbjct: 482 ---------DTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSR 532
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
G+ +H + ++ + +AL+DMY C + +FR+M KNVVSWTAM+
Sbjct: 533 YWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMIT 592
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
Y + G ++ + M +GI PD F + S + + A SL++G HG ++ G+
Sbjct: 593 SYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEK 652
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
+ V+NAL+ Y KC N+E++ +F+ + +D +SW L+ GY++ NE+ LF ML
Sbjct: 653 LLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDML 712
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP--IHDHYT--CMIDILSR 424
+P+ VT+ +L A + +E+GR + Y +R + D Y ++D+ +
Sbjct: 713 LQ-FRPNAVTMTCILPAAASISSLERGRE-----IHAYALRRGFLEDSYASNALVDMYVK 766
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
G L A+ +++ + I W +++ +HG
Sbjct: 767 CGALLVARVLFDRLT-KKNLISWTIMIAGYGMHG 799
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 133/497 (26%), Positives = 223/497 (44%), Gaps = 50/497 (10%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
W L+S +A G +AV ++ M G+ + S +L SS + G IHG +
Sbjct: 172 WTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAH-AVSCVLKCVSSLGSLTEGEVIHGLL 230
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
K G G V + L+ +Y++ G + DA R FD + ++ + +N+MI G
Sbjct: 231 EKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCF--------- 281
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
NG A+DLF +M +G + T SVL AC GL
Sbjct: 282 ----------------------SNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLG 319
Query: 189 ALEEGKQIHAFIIRN----------DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
GK +H + +++ D+ +GS LV MY KC + A VF M+ K
Sbjct: 320 YGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSK 379
Query: 239 -NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
NV W ++ GY + G EE++ +F M GI PD+ + ++ L+ +G
Sbjct: 380 GNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVA 439
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
HG + G + V NAL++FY K I D+ +FN M +D +SW +++SG + G
Sbjct: 440 HGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLN 499
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR--HYFEIMVKEYGIRPIHDHY 415
+E I+LF +M + G + D VTL+ VL AC+++ GR H + + G + +
Sbjct: 500 SEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLAN-- 557
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
++D+ S + M + + W +++S G + + ++ LD
Sbjct: 558 -ALLDMYSNCSDWQSTNQIFRSMG-QKNVVSWTAMITSYMRAGLFDKVAGLLQEMV-LDG 614
Query: 476 YNPASYVLLSSIYASKG 492
P + + S+++A G
Sbjct: 615 IRPDVFAVTSALHAFAG 631
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 215/454 (47%), Gaps = 29/454 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +SWN +I G S+G AV +++ M G +S +T ++L + +
Sbjct: 265 MHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGT-EISSVTVLSVLPACAGLGYGLI 323
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDE--LPEKNIVMYNTMITGL 118
G+ +HG+ +K G L + + G D+ L K + MY
Sbjct: 324 GKAVHGYSVKSGL----------------LWGLDSVQSGIDDAALGSKLVFMY------- 360
Query: 119 LRRGLVEESRRLFRGMKDKDSIS-WTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
++ G + +RR+F M K ++ W ++ G + G E++ LF +M G+A D+
Sbjct: 361 VKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAI 420
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
+L L +G H +I++ V +AL+ Y K I A VF M
Sbjct: 421 SCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPR 480
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
++ +SW +++ G NG + EA+++F M G E D TL SV+ +CA G
Sbjct: 481 QDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVV 540
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
HG S+ TGLI +++NAL+ Y C + + ++++F M ++ VSWTA+++ Y + G
Sbjct: 541 HGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLF 600
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
++ L ++M+ G++PD + L A + +++G+ ++ G+ +
Sbjct: 601 DKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRN-GMEKLLPVANA 659
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
++++ + +EEA+ +++ D I W TL+
Sbjct: 660 LMEMYVKCRNVEEARLIFDRVT-NKDVISWNTLI 692
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 180/371 (48%), Gaps = 25/371 (6%)
Query: 106 KNIVMYNTMITGLLRRGLVEESRRLFRGMKDK--DSISWTTMITGLMQNGLEREAIDLFR 163
K V+ ++ L+ G + E+R +F GM + D WT++++ + G +EA+ LFR
Sbjct: 134 KGSVLGKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFR 193
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
+M+ G++ D VL L +L EG+ IH + + V +AL+ +Y +C
Sbjct: 194 QMQCCGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCG 253
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
++ A VF +M ++ +SW +M+ G NG AV +F M G E T+ SV+
Sbjct: 254 RMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLP 313
Query: 284 SCANLASLEEGTQFHGRSLVTGL----------ISFITVSNALVTFYGKCGNIEDSHRLF 333
+CA L G HG S+ +GL I + + LV Y KCG++ + R+F
Sbjct: 314 ACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVF 373
Query: 334 NEMNVRDEVS-WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS-----ACS 387
+ M+ + V W ++ GYAK G+ E++ LF +M G+ PDE + +L +C+
Sbjct: 374 DAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCA 433
Query: 388 RAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGW 447
R GLV G + + G +I +++ + +A N+MP D I W
Sbjct: 434 RDGLVAHG------YIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMP-RQDTISW 486
Query: 448 ATLLSSCRIHG 458
+++S C +G
Sbjct: 487 NSVISGCSSNG 497
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 130/255 (50%), Gaps = 10/255 (3%)
Query: 157 EAIDLFREMRLEGL--AMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHK----DNVF 210
+A DL +RL G +D ++ V+ CG +LE K+ HA I +
Sbjct: 78 QAGDLAGALRLLGSDGGVDVRSYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSV 137
Query: 211 VGSALVDMYCKCKSIKYAESVFRTMAWK--NVVSWTAMLVGYGQNGCSEEAVKIFCNMQR 268
+G LV Y KC + A +VF M + +V WT+++ Y + G +EAV +F MQ
Sbjct: 138 LGKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQC 197
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIED 328
G+ PD + V+ ++L SL EG HG GL V+NAL+ Y +CG +ED
Sbjct: 198 CGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMED 257
Query: 329 SHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
+ R+F+ M+ RD +SW +++ G G +DLF KM S G + VT++ VL AC+
Sbjct: 258 AARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAG 317
Query: 389 A--GLVEKGRHYFEI 401
GL+ K H + +
Sbjct: 318 LGYGLIGKAVHGYSV 332
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 238/639 (37%), Positives = 357/639 (55%), Gaps = 37/639 (5%)
Query: 12 LISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIM---SSSRRCVDLGRQIHGHI 68
+ISG + D+++V+ M+ LGN R +T++ + + + + LG QI
Sbjct: 1 MISGFVKNSCFEDSIRVFGDMV---LGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLA 57
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+K GF S+V + + L+ +++K G VE +R
Sbjct: 58 IKCGFYSHVSLLTGLISLFSKCGE-------------------------------VEIAR 86
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
LF ++ KD IS MI+G NG +++ LF+E+ G + T ++
Sbjct: 87 LLFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPVYSPFG 146
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
IH F ++ + V +AL +YC+ + +A +F A K + SW AM+
Sbjct: 147 HSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMIS 206
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
G QNG ++ A+ +F MQ+N + P+ T+ S++S+CA + +L G H S
Sbjct: 207 GCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFES 266
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
+ VS AL+ Y KCG+I + LF+ M ++EV+W A++SGY G E + LF ML
Sbjct: 267 NVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDML 326
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
S +KP +T + VL ACS AGLV++G F MV ++G P+ +HY CM+DIL RAG+L
Sbjct: 327 SSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQL 386
Query: 429 EEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIY 488
++A FI MP P W LL +C IH + + A+E L ELDP N YVL+S+IY
Sbjct: 387 KKALEFIKAMPVEPGPPVWGALLGACMIHKDTNLAHVASEKLFELDPENIGYYVLMSNIY 446
Query: 489 ASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLN 548
+ + K+ + +R+ ++K + K PGC+ I+ H+F++ D S P S IYAEL+KL
Sbjct: 447 SVERKYPQAASVRQVAKKKRLAKTPGCTLIEIGQVPHVFTSGDQSHPQSKAIYAELDKLT 506
Query: 549 RKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCS 608
KM + G+ + ++VLHD+E EK + HSEKLAIAFGL+ PG IR++KNLRVC
Sbjct: 507 GKMTEAGFQTETTTVLHDLEEEEKELTMKVHSEKLAIAFGLISTEPGAEIRIIKNLRVCL 566
Query: 609 DCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
DCHN TK++SKIT+R I+VRDA RFH FK+G CSCGD+W
Sbjct: 567 DCHNWTKFLSKITKRVIVVRDANRFHHFKDGLCSCGDYW 605
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 163/346 (47%), Gaps = 34/346 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +S N +ISG +G D+V+++ +L G +S T ++ + S L I
Sbjct: 96 DLISCNAMISGFTCNGETEDSVRLFKELLSSG-ERVSSSTIVGLIPVYSPFGHSYLCNCI 154
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG +K G S+ V + L +Y +L + A++ FDE EK + +N MI+G + GL
Sbjct: 155 HGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLT 214
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ AI LF+ M+ + + T S+L+AC
Sbjct: 215 D-------------------------------AAISLFQTMQKNNVNPNPVTVTSILSAC 243
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+ AL G+ +H+ I N + NV+V +AL+DMY KC SI A +F M KN V+W
Sbjct: 244 AQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWN 303
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHGRSLV 303
AM+ GYG +G +EA+K+F +M + ++P T SV+ +C++ ++EG FH
Sbjct: 304 AMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHD 363
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD-EVSWTALV 348
G +V G+ G ++ + M V W AL+
Sbjct: 364 FGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALL 409
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+WN +ISG+ HG +A+K++ ML + + +TF ++L S V
Sbjct: 294 MPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSV-KPTGLTFLSVLYACSHAGLVKE 352
Query: 61 GRQI-HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
G I H + FGF + +VD+ + G + A +P
Sbjct: 353 GDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMP 397
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/641 (36%), Positives = 346/641 (53%), Gaps = 65/641 (10%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V +N++I + ++ +A+ ++ +ML N TF +L S + +G Q+H
Sbjct: 103 VFFNVMIRSYVNNNLYVEALSIFQVMLSCAF-NPDHYTFPCVLKACSGLDNLRVGLQVHD 161
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
I+K G + +F+G+ LV MY K G + E
Sbjct: 162 AIVKVGLDTNLFIGNALVAMYGKCGCL-------------------------------RE 190
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+R++ M +D +SW +M+ G Q+G +A+++ +EM L D T S+
Sbjct: 191 ARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASL------ 244
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+ V Y ++++Y ++F M KN++SW M
Sbjct: 245 ---------------------------SPVVCYTSLENVQYIHNMFERMTKKNLISWNVM 277
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ Y N EAV +F M+ G++PD T+ S++ +C +L++L G + H L
Sbjct: 278 IAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNL 337
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ + NAL+ Y KCG +E++ +F++M +RD VSWT+++S Y + G+ + + LF K
Sbjct: 338 RPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAK 397
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
ML G PD + + VLSACS GL+++GRHYF +M ++YGI P +H+ CM+D+ RAG
Sbjct: 398 MLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAG 457
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+EEA SFI +MP P+ W LLS+CR+H ++IG AA+ L +L P YVLLS+
Sbjct: 458 EVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSN 517
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IYA G W V +R M++ G++K PG S ++ +VH F A D P + IY EL+
Sbjct: 518 IYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDV 577
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
L KM + GY+P S LHDVE+ +K L HSEKLAI F +L G PIR+ KNLRV
Sbjct: 578 LVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRV 637
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCH A K ISKI R I+VRD RFH F NG CSCGD+W
Sbjct: 638 CGDCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 163/345 (47%), Gaps = 39/345 (11%)
Query: 113 TMITGLLR----RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE 168
T+ L+R +G +R +F +K+ + + MI + N L EA+ +F+ M
Sbjct: 72 TLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSC 131
Query: 169 GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYA 228
D +TF VL AC GL L G Q+H I++ N+F+G+ALV MY KC ++ A
Sbjct: 132 AFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREA 191
Query: 229 ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL 288
V M +++VVSW +M+ GY Q+G ++A++I M + D T+ S+
Sbjct: 192 RKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASL------- 244
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
+ V Y N++ H +F M ++ +SW ++
Sbjct: 245 --------------------------SPVVCYTSLENVQYIHNMFERMTKKNLISWNVMI 278
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
+ Y NE + LF +M G+KPD VT+ +L AC + GR + +++ +
Sbjct: 279 AIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHK-YIEKGNL 337
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
RP ++D+ ++ G LEEA+ +KM D + W +++S+
Sbjct: 338 RPNLLLENALLDMYAKCGCLEEARDVFDKMRL-RDVVSWTSMMSA 381
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 141/301 (46%), Gaps = 24/301 (7%)
Query: 195 QIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQN 253
++H+ I+ N+H + + + L+ Y A +F KNVV + M+ Y N
Sbjct: 56 KLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNN 115
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVS 313
EA+ IF M PD +T V+ +C+ L +L G Q H + GL + + +
Sbjct: 116 NLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIG 175
Query: 314 NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLK 373
NALV YGKCG + ++ ++ ++M RD VSW ++V+GYA+ G+ ++ +++ ++M S L
Sbjct: 176 NALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLN 235
Query: 374 PDEVTLIGVLSACSRAGL--VEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEA 431
D T+ + L V+ + FE M K+ I + MI I EA
Sbjct: 236 HDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLIS-----WNVMIAIYVNNSMPNEA 290
Query: 432 KSFINKMP---FPPDAIGWATLLSSC----------RIHGNVEIGKWAAESLLE---LDP 475
S +M PDA+ A+LL +C R+H +E G LLE LD
Sbjct: 291 VSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDM 350
Query: 476 Y 476
Y
Sbjct: 351 Y 351
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/508 (42%), Positives = 324/508 (63%), Gaps = 2/508 (0%)
Query: 142 WTTMITGLMQNGLEREAIDLFREMRLEGLA-MDQFTFGSVLTACGGLLALEEGKQIHAFI 200
W T+I G + G A+ L+REMR G D T+ +L A G + + G+ IH+ +
Sbjct: 88 WNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHSVV 147
Query: 201 IRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAV 260
IR+ ++V ++L+ +Y C + A VF M K++V+W +++ G+ +NG EEA+
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 261 KIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFY 320
++ M GI+PD FT+ S++S+CA + +L G +FH + GL + SN L+ Y
Sbjct: 208 ALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLY 267
Query: 321 GKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS-HGLKPDEVTL 379
+CG +E++ LF+EM ++ VSWT+L+ G A G E I+LF+ M S GL P E+T
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITF 327
Query: 380 IGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP 439
+G+L ACS G+V++G YF M +EY I P +H+ CM+D+L+RAG++++A +I KMP
Sbjct: 328 VGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMP 387
Query: 440 FPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQ 499
P+ + W TLL +C +HG+ ++ + A +L+L+P + YVLLS++YAS+ +W V +
Sbjct: 388 MQPNVVIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDYVLLSNMYASEQRWSDVQK 447
Query: 500 LRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPD 559
+R+ M GVRK PG S ++ +RVH F D S P +D IYA+L+++ ++ EGYVP
Sbjct: 448 IRKQMLRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMIYAKLKEMTDRLRLEGYVPQ 507
Query: 560 MSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISK 619
+S+V DVE EK L +HSEK+AIAF L+ P PIRVVKNL+VC+DCH A K +SK
Sbjct: 508 ISNVYVDVEEEEKENALVYHSEKIAIAFMLISTPERWPIRVVKNLKVCADCHLAIKLVSK 567
Query: 620 ITQREILVRDAVRFHLFKNGECSCGDFW 647
+ REI+VRD RFH FKNG CSC D+W
Sbjct: 568 VYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 203/415 (48%), Gaps = 48/415 (11%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN LI G+A G+ AV +Y M G T+ +L V LG IH +
Sbjct: 88 WNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHSVV 147
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
++ GFGS ++V + L+ +YA G + A + FD++PE
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE----------------------- 184
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
KD ++W ++I G +NG EA+ L+ EM L+G+ D FT S+L+AC +
Sbjct: 185 --------KDLVAWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIG 236
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
AL GK+ H ++I+ N+ + L+D+Y +C ++ A+++F M KN VSWT+++V
Sbjct: 237 ALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIV 296
Query: 249 GYGQNGCSEEAVKIFCNMQ-RNGIEPDDFTLGSVISSCANLASLEEGTQFHGR-SLVTGL 306
G NG +EA+++F NM+ + G+ P + T ++ +C++ ++EG ++ R S +
Sbjct: 297 GLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKI 356
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKANETIDLFE 365
I +V + G ++ ++ +M ++ V W L+ G + DL E
Sbjct: 357 EPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDS----DLAE 412
Query: 366 --KMLSHGLKP----DEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
+M L+P D V L + ++ R V+K R + M+++ G+R + H
Sbjct: 413 LARMKILQLEPNHSGDYVLLSNMYASEQRWSDVQKIR---KQMLRD-GVRKVPGH 463
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 159/289 (55%), Gaps = 11/289 (3%)
Query: 186 GLLALEEGKQIHAFIIRNDHK-DNVFVGSALVDMYCKCKS---IKYAESVFRTMAWK-NV 240
G+ +L + +QIHAF IRN + +G L+ S + YA VF + NV
Sbjct: 26 GVSSLTKLRQIHAFSIRNGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINV 85
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQFHG 299
W ++ GY + G S AV ++ M+ +G +EPD T ++ + +A + G H
Sbjct: 86 FIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHS 145
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ +G S I V N+L+ Y CG++ ++++F++M +D V+W ++++G+A+ GK E
Sbjct: 146 VVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEE 205
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ L+ +M G+KPD T++ +LSAC++ G + G+ + M+K R +H ++
Sbjct: 206 ALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSS-NVLL 264
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
D+ +R GR+EEAK+ ++M +++ W +L+ ++G +GK A E
Sbjct: 265 DLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNG---LGKEAIE 309
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 92/173 (53%), Gaps = 6/173 (3%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V+WN +I+G A +G +A+ +Y M G+ T ++L + + L
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEMDLKGIKP-DGFTIVSLLSACAKIGALTL 240
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G++ H +++K G + + L+D+YA+ G + +AK FDE+ +KN V + ++I GL
Sbjct: 241 GKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAV 300
Query: 121 RGLVEESRRLFRGMKDKD-----SISWTTMITGLMQNGLEREAIDLFREMRLE 168
GL +E+ LF+ M+ K+ I++ ++ G+ +E + FR M E
Sbjct: 301 NGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEE 353
>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Glycine max]
Length = 676
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 243/649 (37%), Positives = 370/649 (57%), Gaps = 35/649 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P V+WN +IS H SHG +AV+ Y ML +G+ TFS + S +
Sbjct: 61 LPSRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLP-DAYTFSAISKAFSQLGLIRH 119
Query: 61 GRQIHGHILKFGFGSYV-FVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G++ HG + G FV S LVDMYAK FD++ + ++V
Sbjct: 120 GQRAHGLAVVLGLEVLDGFVASALVDMYAK----------FDKMRDAHLV---------- 159
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
FR + +KD + +T +I G Q+GL+ EA+ +F +M G+ +++T
Sbjct: 160 -----------FRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVKPNEYTLAC 208
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L CG L L G+ IH ++++ + V ++L+ MY +C I+ + VF + + N
Sbjct: 209 ILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYAN 268
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
V+WT+ +VG QNG E AV IF M R I P+ FTL S++ +C++LA LE G Q H
Sbjct: 269 QVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHA 328
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
++ GL AL+ YGKCGN++ + +F+ + D V+ +++ YA+ G +E
Sbjct: 329 ITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHE 388
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
++LFE++ + GL P+ VT I +L AC+ AGLVE+G F + + I DH+TCMI
Sbjct: 389 ALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFASIRNNHNIELTIDHFTCMI 448
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L R+ RLEEA I ++ PD + W TLL+SC+IHG VE+ + +LEL P +
Sbjct: 449 DLLGRSRRLEEAAMLIEEVR-NPDVVLWRTLLNSCKIHGEVEMAEKVMSKILELAPGDGG 507
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+++LL+++YAS GKW+ V +++ T+R+ ++K P SW+ VH F A D S P S +
Sbjct: 508 THILLTNLYASAGKWNQVIEMKSTIRDLKLKKSPAMSWVDVDREVHTFMAGDLSHPRSLE 567
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLL-FIPPGLPI 598
I+ L L +K+ GY P+ VL D++ +KI L +HSEKLAIA+ L I I
Sbjct: 568 IFEMLHGLMKKVKTLGYNPNTRFVLQDLDEEKKISSLYYHSEKLAIAYALWKTIGRTTTI 627
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R+ KNLRVC DCH+ K++S +T R+I+ RD+ RFH FK G CSC D+W
Sbjct: 628 RIFKNLRVCGDCHSWIKFVSLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 208/393 (52%), Gaps = 34/393 (8%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
+S+++ S+ + + R +H +++K GF SY F+G L+D Y K G +
Sbjct: 4 YSSLIAQSAHTKSLTTLRAVHTNVIKSGF-SYSFLGHKLIDGYIKCGSL----------- 51
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
E+R+LF + + ++W +MI+ + +G +EA++ +
Sbjct: 52 --------------------AEARKLFDELPSRHIVTWNSMISSHISHGKSKEAVEFYGN 91
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAF-IIRNDHKDNVFVGSALVDMYCKCK 223
M +EG+ D +TF ++ A L + G++ H ++ + FV SALVDMY K
Sbjct: 92 MLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVASALVDMYAKFD 151
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
++ A VFR + K+VV +TA++VGY Q+G EA+KIF +M G++P+++TL ++
Sbjct: 152 KMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVKPNEYTLACILI 211
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+C NL L G HG + +GL S + +L+T Y +C IEDS ++FN+++ ++V+
Sbjct: 212 NCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVT 271
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
WT+ V G + G+ + +F +M+ + P+ TL +L ACS ++E G I +
Sbjct: 272 WTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAITM 331
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFIN 436
K G+ +I++ + G +++A+S +
Sbjct: 332 K-LGLDGNKYAGAALINLYGKCGNMDKARSVFD 363
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 153/288 (53%), Gaps = 4/288 (1%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
+ S++ +L + +H +I++ + F+G L+D Y KC S+ A +F +
Sbjct: 4 YSSLIAQSAHTKSLTTLRAVHTNVIKSGFSYS-FLGHKLIDGYIKCGSLAEARKLFDELP 62
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
+++V+W +M+ + +G S+EAV+ + NM G+ PD +T ++ + + L + G +
Sbjct: 63 SRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQR 122
Query: 297 FHGRSLVTGL-ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
HG ++V GL + V++ALV Y K + D+H +F + +D V +TAL+ GYA+ G
Sbjct: 123 AHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHG 182
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
E + +FE M++ G+KP+E TL +L C G + G+ ++VK G+ +
Sbjct: 183 LDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKS-GLESVVASQ 241
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
T ++ + SR +E++ N++ + + + W + + +G E+
Sbjct: 242 TSLLTMYSRCNMIEDSIKVFNQLDY-ANQVTWTSFVVGLVQNGREEVA 288
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 243/648 (37%), Positives = 354/648 (54%), Gaps = 34/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V WN +I+G + +D+V+V+ M+ G+ L T +T+L + + V +
Sbjct: 164 MPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGV-RLDSTTVATVLPAVAEMQEVKV 222
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G I LK GF +V + L+ +++K + A+ F + + ++V YN +I+G
Sbjct: 223 GMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSC 282
Query: 121 RGLVEESRRLFRG-MKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
G E + + FR + +S +TM+ GL FG
Sbjct: 283 NGETECAVKYFRELLVSGQRVSSSTMV----------------------GLIPVSSPFGH 320
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+ AC I F +++ V +AL +Y + I A +F + K
Sbjct: 321 LHLACC----------IQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKT 370
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
V +W AM+ GY Q+G +E A+ +F M P+ T+ S++S+CA L +L G H
Sbjct: 371 VAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQ 430
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
L I VS AL+ Y KCGNI ++ +LF+ + ++ V+W ++ GY G +E
Sbjct: 431 LIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDE 490
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ LF +ML G +P VT + VL ACS AGLV +G F MV +Y I P+ +HY CM+
Sbjct: 491 ALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMV 550
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
DIL RAG+LE+A FI KMP P W TLL +C IH + + + A+E L ELDP N
Sbjct: 551 DILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGNVG 610
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
YVLLS+IY+ + + + +R ++++ + K PGC+ I+ H+F D S +
Sbjct: 611 YYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSHSQTTS 670
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IYA+LE+L KM + GY + + LHDVE EK M N HSEKLAIAFGL+ PG IR
Sbjct: 671 IYAKLEELTGKMREMGYQSETVTALHDVEEEEKELMFNVHSEKLAIAFGLITTEPGTEIR 730
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
++KNLRVC DCH ATK+ISKIT+R I+VRDA RFH FK+G CSCGD+W
Sbjct: 731 IIKNLRVCLDCHAATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 778
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 237/489 (48%), Gaps = 38/489 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D +N+LI G S ++ Y +LK+ LS F+ +S+S +L
Sbjct: 66 VPKPDIFLFNVLIKGF-SFSPDASSISFYTHLLKNT--TLSPDNFTYAFAISASPD-DNL 121
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +H H + GF S +FV S LVD+Y K + A++ FD++P
Sbjct: 122 GMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMP---------------- 165
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
D+D++ W TMITGL++N +++ +F++M +G+ +D T +V
Sbjct: 166 ---------------DRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATV 210
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A + ++ G I ++ + +V + L+ ++ KC+ + A +F + ++
Sbjct: 211 LPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDL 270
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VS+ A++ G+ NG +E AVK F + +G T+ +I + L G
Sbjct: 271 VSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGF 330
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ +G I +VS AL T Y + I+ + +LF+E + + +W A++SGYA+ G
Sbjct: 331 CVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMA 390
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
I LF++M++ P+ VT+ +LSAC++ G + G+ +++ + + I+ T +ID
Sbjct: 391 ISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVS-TALID 449
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+ ++ G + EA + + + + W T++ +HG + +L L + P+S
Sbjct: 450 MYAKCGNISEASQLFD-LTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLG-FQPSS 507
Query: 481 YVLLSSIYA 489
LS +YA
Sbjct: 508 VTFLSVLYA 516
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 120/505 (23%), Positives = 210/505 (41%), Gaps = 73/505 (14%)
Query: 38 GNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAK 97
G++SR +T+L + S + H +++ G+ + + L +G A+
Sbjct: 4 GDISR---NTLLALISKACTFPHLAETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHAR 60
Query: 98 RGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLERE 157
F +P+ +I ++N +I G F D SIS+ T L++N
Sbjct: 61 ALFFSVPKPDIFLFNVLIKG-------------FSFSPDASSISF---YTHLLKN----- 99
Query: 158 AIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVD 217
L+ D FT+ ++A G +HA + + N+FV SALVD
Sbjct: 100 ----------TTLSPDNFTYAFAISASPDD---NLGMCLHAHAVVDGFDSNLFVASALVD 146
Query: 218 MYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFT 277
+YCK + YA VF M ++ V W M+ G +N C +++V++F +M G+ D T
Sbjct: 147 LYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTT 206
Query: 278 LGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN 337
+ +V+ + A + ++ G +L G V L++ + KC +++ + LF +
Sbjct: 207 VATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIR 266
Query: 338 VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS----------ACS 387
D VS+ AL+SG++ G+ + F ++L G + T++G++ AC
Sbjct: 267 KPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACC 326
Query: 388 RAGLVEKGRHYFEIMVKE-----YG-------IRPIHDH--------YTCMIDILSRAGR 427
G K + V Y R + D + MI +++G
Sbjct: 327 IQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGL 386
Query: 428 LEEAKSFINKM---PFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYV-- 482
E A S +M F P+ + ++LS+C G + GK + L++ YV
Sbjct: 387 TEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGK-SVHQLIKSKNLEQNIYVST 445
Query: 483 LLSSIYASKGKWDHVSQLRRTMREK 507
L +YA G SQL EK
Sbjct: 446 ALIDMYAKCGNISEASQLFDLTSEK 470
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 242/644 (37%), Positives = 379/644 (58%), Gaps = 42/644 (6%)
Query: 10 NLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHIL 69
N LI G++ A+++ +L N ++ T+ +++ + + + +++H H+L
Sbjct: 43 NKLIQSLCKQGNLTQALELLSLE-----PNPAQHTYELLILSCTHQNSLLDAQRVHRHLL 97
Query: 70 KFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRR 129
+ GF F+ + L++MY+ I +A++ FD+ + I +YN
Sbjct: 98 ENGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNA---------------- 141
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG--- 186
LFR L G E ++++R M G+ D+FT+ VL AC
Sbjct: 142 LFRA---------------LSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASEC 186
Query: 187 -LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
+ L +G++IHA I+R+ + V + + LVDMY K + A VF M KNVVSW+A
Sbjct: 187 FVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSA 246
Query: 246 MLVGYGQNGCSEEAVKIF--CNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
M+ Y +NG + EA+++F ++ + P+ T+ SV+ +CA LA+LE+G HG L
Sbjct: 247 MIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILR 306
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
GL S + V +ALVT Y +CG +E R+F++M+ RD VSW +L+S Y G + I +
Sbjct: 307 KGLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGI 366
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
FE+M +G++P ++ + VL ACS AGLV++G+ F M +GI P +HY CM+D+L
Sbjct: 367 FEEMTYNGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLG 426
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
RA RLEEA I M P W +LL SCRIH NVE+ + A+ L +L+P N +YVL
Sbjct: 427 RANRLEEAAKIIENMRIEPGPKVWGSLLGSCRIHCNVELAERASIRLFDLEPTNAGNYVL 486
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
L+ IYA G WD V ++++ + +G++K PG SWI+ K +++ F + D +P +Q++A
Sbjct: 487 LADIYAEAGMWDGVKRVKKLLEARGLQKVPGRSWIEVKRKIYSFVSVDEVNPRMEQLHAL 546
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
L KL+ ++ +EGYVP VL+D++ +EK +++ HSEKLA+AFGL+ G IR+ K+
Sbjct: 547 LVKLSMELKEEGYVPQTKVVLYDLKAAEKERIVLGHSEKLAVAFGLINSSKGEVIRITKS 606
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LR+C DCH+ TK+ISK +EILVRD RFH F++G CSCGD+W
Sbjct: 607 LRLCEDCHSFTKFISKFANKEILVRDVNRFHHFRDGVCSCGDYW 650
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 130/286 (45%), Gaps = 65/286 (22%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVY-NLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
MP + VSW+ +I+ +A +G +A++++ LML+ + +T ++L ++ ++
Sbjct: 236 MPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALE 295
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
GR IHG+IL+ G S + V S LV MYA+ G + +R FD++ ++++V
Sbjct: 296 QGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVV---------- 345
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
SW ++I+ +G ++AI +F EM G+ +F S
Sbjct: 346 ---------------------SWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVS 384
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL AC ++EGK + +++ V + C S+++
Sbjct: 385 VLGACSHAGLVDEGKMLF---------NSMHVAHGI------CPSVEH------------ 417
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
+ M+ G+ EEA KI NM+ IEP GS++ SC
Sbjct: 418 ---YACMVDLLGRANRLEEAAKIIENMR---IEPGPKVWGSLLGSC 457
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 244/675 (36%), Positives = 377/675 (55%), Gaps = 39/675 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP S+N L++G+ + + A+ ++ M L +++ ++ S RR
Sbjct: 43 MPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA-----SYNALISGLSLRR--QT 95
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+ F V + L+ Y + GL+ DA R F ++PE+N V Y ++ GLL
Sbjct: 96 LPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLD 155
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR----------LEGL 170
G V E+RRLF M D+D ++WT M++G Q G EA LF EM + G
Sbjct: 156 AGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGY 215
Query: 171 AMD-----------------QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGS 213
A + + ++ ++L +E+ ++ F +H V +
Sbjct: 216 AQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAEL--FNAMPEHP--VAACN 271
Query: 214 ALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEP 273
A++ + + + A++VF M ++ +W+AM+ Y QN EA+ F M G+ P
Sbjct: 272 AMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRP 331
Query: 274 DDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLF 333
+ ++ S+++ CA LA L+ G + H L + +AL+T Y KCGN++ + R+F
Sbjct: 332 NYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVF 391
Query: 334 NEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVE 393
+ +D V W ++++GYA+ G + + +F M G+ PD +T IG L+ACS G V+
Sbjct: 392 HTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVK 451
Query: 394 KGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+GR F M IRP +HY+CM+D+L R+G +EEA I MP PDA+ W L+ +
Sbjct: 452 EGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGA 511
Query: 454 CRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDP 513
CR+H N EI ++AA+ LLEL+P N YVLLS IY S G+W+ S++R+ + + + K P
Sbjct: 512 CRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSP 571
Query: 514 GCSWIKYKSRVHIFSADD-WSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEK 572
GCSWI+Y RVH+F++ D + P I LEKL+ +++ GY D S VLHD++ +K
Sbjct: 572 GCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQK 631
Query: 573 IKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVR 632
L +HSE+ A+A+GLL IP G+PIRV+KNLRVC DCH+A K I+KIT REI++RDA R
Sbjct: 632 SHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANR 691
Query: 633 FHLFKNGECSCGDFW 647
FH FK+G CSC D+W
Sbjct: 692 FHHFKDGFCSCRDYW 706
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 186/410 (45%), Gaps = 63/410 (15%)
Query: 88 AKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMIT 147
A+ G I A+ F+ +P + YN ++ G R L + + LFR M +D S+ +I+
Sbjct: 28 ARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALIS 87
Query: 148 GL---------------------------------MQNGLEREAIDLFREMRLEGLAMDQ 174
GL +++GL +AI LF++ M +
Sbjct: 88 GLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQ-------MPE 140
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIKYAESVFR 233
S GGL L+ G+ A + ++ D +V +A++ YC+ I A ++F
Sbjct: 141 RNHVSYTVLLGGL--LDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFD 198
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISS-CANLASL 291
M +NVVSWTAM+ GY QNG A K+F M +RN + +G + + + A L
Sbjct: 199 EMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAEL 258
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
H + NA++ +G+ G ++ + +F +M RD+ +W+A++ Y
Sbjct: 259 FNAMPEHP----------VAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAY 308
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK---EYGI 408
+ E + F +ML G++P+ ++I +L+ C+ +++ GR M++ + +
Sbjct: 309 EQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDV 368
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ + +I + + G L++AK + P D + W ++++ HG
Sbjct: 369 FAV----SALITMYIKCGNLDKAKRVFHTFE-PKDIVMWNSMITGYAQHG 413
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 88/225 (39%), Gaps = 42/225 (18%)
Query: 314 NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGL- 372
NA + + GNIE + F M +R S+ AL++GY + + + LF +M S L
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 373 ----------------------------KPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
P V+ +L R GL+ F+ M +
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
H YT ++ L AGR+ EA+ ++MP D + W +LS G + G+
Sbjct: 141 RN-----HVSYTVLLGGLLDAGRVNEARRLFDEMP-DRDVVAWTAMLS-----GYCQAGR 189
Query: 465 WAAESLL--ELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREK 507
L E+ N S+ + S YA G+ + +L M E+
Sbjct: 190 ITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPER 234
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 238/641 (37%), Positives = 361/641 (56%), Gaps = 36/641 (5%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
+N LI+G ++ ++ + ++ + K GL NL TF +L + LG +H +
Sbjct: 79 YNTLINGFVNNHLFHETLDLFLSIRKHGL-NLHGFTFPLVLKACTRASNRKLGIDLHSLV 137
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+K GF V + L+ +Y+ G + DA + F+E+PE+++V
Sbjct: 138 VKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVV------------------- 178
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
+WT + +G G REAIDLF++M G+ D + VL+AC +
Sbjct: 179 ------------TWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVG 226
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
L+ G+ I + + + N FV + LV++Y KC ++ A SVF +M K++V+W+ M+
Sbjct: 227 DLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQ 286
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT--GL 306
GY N +E ++ F M + ++PD F++ +SSCA+L +L+ G G SL+
Sbjct: 287 GYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEW--GISLIDRHEF 344
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
++ + ++NAL+ Y KCG + +F EM +D V A +SG AK G + +F +
Sbjct: 345 LTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQ 404
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
G+ PD T +G+L C AGL++ G +F + Y ++ +HY CM+D+ RAG
Sbjct: 405 TEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAG 464
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
L++A I MP P+AI W LLS CR+ + ++ + + L+ L+P+N +YV LS+
Sbjct: 465 MLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSN 524
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IY+ G+WD +++R M KG++K PG SWI+ + VH F ADD S P SD+IYA+LE
Sbjct: 525 IYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWIELEGTVHEFLADDKSHPLSDKIYAKLED 584
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
L +M G+VP V DVE EK ++L HHSEKLA+AFGL+ G IRVVKNLRV
Sbjct: 585 LGNEMRLMGFVPTTEFVFFDVEDEEKERVLGHHSEKLAVAFGLISTDHGQVIRVVKNLRV 644
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCH K ISKIT+REI+VRD RFH F NG CSC D+W
Sbjct: 645 CGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 172/354 (48%), Gaps = 38/354 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P V+W L SG+ + G +A+ ++ M++ G+ S + + ++S+ DL
Sbjct: 172 IPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDS---YFIVQVLSACVHVGDL 228
Query: 61 --GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G I H+ + FV + LV++YAK G + A+ FD + EK+IV ++T
Sbjct: 229 DSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWST----- 283
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
MI G N +E I+ F +M E L DQF+
Sbjct: 284 --------------------------MIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIV 317
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
L++C L AL+ G+ + I R++ N+F+ +AL+DMY KC ++ VF+ M K
Sbjct: 318 GFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEK 377
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-F 297
++V A + G +NG + + +F ++ GI PD T ++ C + +++G + F
Sbjct: 378 DIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFF 437
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
+ S V L + +V +G+ G ++D++RL +M +R + + W AL+SG
Sbjct: 438 NAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 164/357 (45%), Gaps = 48/357 (13%)
Query: 194 KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQN 253
KQ+H +I + + F+ + L+ + Y+ +F + N+ + ++ G+ N
Sbjct: 30 KQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTLINGFVNN 89
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVS 313
E + +F +++++G+ FT V+ +C ++ + G H + G +
Sbjct: 90 HLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAM 149
Query: 314 NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLK 373
+L++ Y G + D+H++F E+ R V+WTAL SGY GK E IDLF+KM+ G++
Sbjct: 150 TSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVR 209
Query: 374 PDEVTLIGVLSACSRAGLVEKG----RHYFEI-MVKEYGIRPIHDHYTCMIDILSRAGRL 428
PD ++ VLSAC G ++ G +H E+ M K +R T ++++ ++ G++
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVR------TTLVNLYAKCGKM 263
Query: 429 EEAKSFINKM------------------PFP----------------PDAIGWATLLSSC 454
E+A+S + M FP PD LSSC
Sbjct: 264 EKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSC 323
Query: 455 RIHGNVEIGKWAAESLLELDPYNPASYV--LLSSIYASKGKWDHVSQLRRTMREKGV 509
G +++G+W SL++ + ++ L +YA G ++ + M+EK +
Sbjct: 324 ASLGALDLGEWGI-SLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDI 379
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/542 (39%), Positives = 325/542 (59%), Gaps = 1/542 (0%)
Query: 106 KNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM 165
+++V+ N ++ + ++++ LF G+ +DS +W+ M+ G + G FRE+
Sbjct: 33 QDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAGDHAGCYATFREL 92
Query: 166 RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI 225
G+ D +T V+ C L+ G+ IH ++++ + FV ++LVDMY KC +
Sbjct: 93 LRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVV 152
Query: 226 KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
+ A+ +F M K++V+WT M+ Y E V +F M+ G+ PD + +V+++C
Sbjct: 153 EDAQRLFERMLSKDLVTWTVMIGAYADCNAYESLV-LFDRMREEGVVPDKVAMVTVVNAC 211
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
A L ++ + + G + + A++ Y KCG++E + +F+ M ++ +SW+
Sbjct: 212 AKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWS 271
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE 405
A+++ Y G+ + IDLF MLS + P+ VT + +L ACS AGL+E+G +F M +E
Sbjct: 272 AMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEE 331
Query: 406 YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKW 465
+ +RP HYTCM+D+L RAGRL+EA I M D W+ LL +CRIH +E+ +
Sbjct: 332 HAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACRIHSKMELAEK 391
Query: 466 AAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVH 525
AA SLLEL P NP YVLLS+IYA GKW+ V++ R M ++ ++K PG +WI+ ++ +
Sbjct: 392 AANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKKIPGWTWIEVDNKTY 451
Query: 526 IFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAI 585
FS D S P S +IY L L +K+ GYVPD VL DVE K +ML HSEKLAI
Sbjct: 452 QFSVGDRSHPQSKEIYEMLMSLIKKLEMAGYVPDTDFVLQDVEEEVKQEMLYTHSEKLAI 511
Query: 586 AFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGD 645
AFGL+ IP G PIR+ KNLRVC DCH +K +S I +R I+VRDA RFH F +G CSCGD
Sbjct: 512 AFGLIAIPEGEPIRISKNLRVCGDCHTFSKMVSSIMRRSIIVRDANRFHHFNDGTCSCGD 571
Query: 646 FW 647
+W
Sbjct: 572 YW 573
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 200/443 (45%), Gaps = 78/443 (17%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+ D +W++++ G A G + +L+ G+ T ++ R + +
Sbjct: 61 LTMRDSKTWSVMVGGFAKAGDHAGCYATFRELLRCGV-TPDNYTLPFVIRTCRDRTDLQI 119
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR IH +LK G S FV + LVDMYAK ++ DA+R F+
Sbjct: 120 GRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFER------------------ 161
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
M KD ++WT MI G + E++ LF MR EG+ D+ +V
Sbjct: 162 -------------MLSKDLVTWTVMI-GAYADCNAYESLVLFDRMREEGVVPDKVAMVTV 207
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ AC L A+ + + +I+RN +V +G+A++DMY KC S++ A VF M KNV
Sbjct: 208 VNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNV 267
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SW+AM+ YG +G ++A+ +F M I P+ T S++ +C++ +EEG +F
Sbjct: 268 ISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFF-- 325
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKANE 359
+ ++ E VR +V +T +V + G+ +E
Sbjct: 326 -----------------------------NSMWEEHAVRPDVKHYTCMVDLLGRAGRLDE 356
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSAC---SRAGLVEKGRH-YFEIMVKEYGIRPIHDHY 415
+ L E M ++ DE +L AC S+ L EK + E+ + G HY
Sbjct: 357 ALRLIEAM---TVEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQNPG------HY 407
Query: 416 TCMIDILSRAGRLEEAKSFINKM 438
+ +I ++AG+ E+ F + M
Sbjct: 408 VLLSNIYAKAGKWEKVAKFRDMM 430
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 145/266 (54%), Gaps = 5/266 (1%)
Query: 194 KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQN 253
+Q+HA ++ N ++ + + L+ Y + K+I A S+F + ++ +W+ M+ G+ +
Sbjct: 20 RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKA 79
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVS 313
G F + R G+ PD++TL VI +C + L+ G H L GL+S V
Sbjct: 80 GDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVC 139
Query: 314 NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLK 373
+LV Y KC +ED+ RLF M +D V+WT ++ YA A E++ LF++M G+
Sbjct: 140 ASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCN-AYESLVLFDRMREEGVV 198
Query: 374 PDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE-YGIRPIHDHYTCMIDILSRAGRLEEAK 432
PD+V ++ V++AC++ G + + R + +V+ + + I T MID+ ++ G +E A+
Sbjct: 199 PDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILG--TAMIDMYAKCGSVESAR 256
Query: 433 SFINKMPFPPDAIGWATLLSSCRIHG 458
++M + I W+ ++++ HG
Sbjct: 257 EVFDRMK-EKNVISWSAMIAAYGYHG 281
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/550 (38%), Positives = 335/550 (60%), Gaps = 9/550 (1%)
Query: 106 KNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM 165
++ V+ T++T R + +R F ++ D +SW M +Q+ REA+ LF M
Sbjct: 387 RDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERM 446
Query: 166 RLEGLAMDQFTFGSVLTACGGL---LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC 222
LEG+ TF + LTAC A GK+I + + + + V +A ++MY KC
Sbjct: 447 LLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKC 506
Query: 223 KSIKYAESVFRTM--AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLG 279
S+ A +VF + A ++ ++W +ML YG +G +EA ++F M+ ++P+ T
Sbjct: 507 GSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFV 566
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM--N 337
+V+ + + S+ +G + H R + G S + NAL+ Y KCG+++D+ +F++ N
Sbjct: 567 AVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSN 626
Query: 338 VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH 397
D ++WT+L++GYA++G+A + LF M G++P+ VT I L+AC+ G +E+G
Sbjct: 627 QEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQGCE 686
Query: 398 YFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIH 457
M ++GI P H++C++D+L R GRL+EA+ + + D I W LL +C+
Sbjct: 687 LLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVITWMALLDACKNS 745
Query: 458 GNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSW 517
+E G+ AE +++LDP +SY++L+S+YA+ G+W+ + +R+TM +KG+R DPGCS
Sbjct: 746 KELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSA 805
Query: 518 IKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLN 577
++ +H FSA D S P S++IY ELE+L+ + GYV D VLHDV K ++L
Sbjct: 806 VEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQEHKERLLM 865
Query: 578 HHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFK 637
HSEKLAIAFGL+ P G P+RV+KNLRVCSDCH ATK ISK+T R+IL+RD+ R+H F
Sbjct: 866 RHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSRYHHFT 925
Query: 638 NGECSCGDFW 647
+G CSCGD+W
Sbjct: 926 SGTCSCGDYW 935
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 130/482 (26%), Positives = 213/482 (44%), Gaps = 68/482 (14%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG--- 61
D V+WN +IS +GS +A++++ M +DG + +TF ++L CV+ G
Sbjct: 209 DVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVL-----DSCVEAGLLS 263
Query: 62 ----RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF----DELPEKNIVMYNT 113
R IHG I+ G FV + LVD Y KLG + DA F DE P ++V +
Sbjct: 264 LEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSA 323
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
MI+ + G +ES RLF M LEG
Sbjct: 324 MISACWQNGWPQESLRLFFAMN-------------------------------LEGTKPS 352
Query: 174 QFTFGSVLTACGGL-------LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIK 226
T SVL AC L LE+ ++ + +DNV G+ L+ Y + +
Sbjct: 353 GVTLVSVLNACSMLQVGSATAFVLEQAMEVVSAT-----RDNVL-GTTLLTTYARSNDLP 406
Query: 227 YAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCA 286
A + F + +VVSW AM Y Q+ S EA+ +F M G+ P T + +++CA
Sbjct: 407 RARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACA 466
Query: 287 NLASLEE---GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV--RDE 341
G + GL V+NA + Y KCG++ D+ +F ++ RD
Sbjct: 467 AYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDC 526
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSHGL-KPDEVTLIGVLSACSRAGLVEKGRHYFE 400
++W ++++ Y G E +LF+ M + L KP++VT + VL A + + +GR
Sbjct: 527 ITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHA 586
Query: 401 IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF-PPDAIGWATLLSSCRIHGN 459
+V G ++++ ++ G L++A++ +K D I W +L++ +G
Sbjct: 587 RVVSN-GFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQ 645
Query: 460 VE 461
E
Sbjct: 646 AE 647
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 204/426 (47%), Gaps = 56/426 (13%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP---EKNIVMYNTMITG 117
GR+IH I F +G+ L+ MY+K G + DAK+ FD LP ++++V +N MI+
Sbjct: 160 GRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISA 219
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
LR G E+ +LFR M D+D + TF
Sbjct: 220 FLRNGSAREALQLFRDM-DRDGAP-----------------------------PPNSVTF 249
Query: 178 GSVLTAC--GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
SVL +C GLL+LE+ + IH I+ + FV +ALVD Y K S+ A VF
Sbjct: 250 VSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRK 309
Query: 236 A----WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASL 291
++V+ +AM+ QNG +E++++F M G +P TL SV+++C+ L +
Sbjct: 310 GDEEPSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSML-QV 368
Query: 292 EEGTQF---HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
T F +V+ + + L+T Y + ++ + F+ + D VSW A+
Sbjct: 369 GSATAFVLEQAMEVVSATRDNV-LGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMA 427
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS-----RAGLVEKGRHYFEIMV 403
+ Y + ++ E + LFE+ML G++P T I L+AC+ A + K + ++
Sbjct: 428 AAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGK---RIQSLL 484
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM-PFPPDAIGWATLLSSCRIHGNVEI 462
+E G+ +++ ++ G L +A++ ++ P D I W ++L++ HG +
Sbjct: 485 EEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHG---L 541
Query: 463 GKWAAE 468
GK A E
Sbjct: 542 GKEAFE 547
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 211/444 (47%), Gaps = 50/444 (11%)
Query: 22 VNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHIL--KFGFGSYVFV 79
V D + ++ D G+ + T+ +L R + G+++H HIL + ++ F+
Sbjct: 24 VEDLTAAVSRIIADQ-GHCAPSTYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFL 82
Query: 80 GSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDS 139
S L+ M+AK G + +A + L ++ +Y
Sbjct: 83 ASDLIVMHAKCGNLAEA----EALADRFASVY---------------------------- 110
Query: 140 ISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAF 199
S T MI M++G +A++LF M + + +++ AC L L G++IH+
Sbjct: 111 -SCTAMIRAWMEHGRPDKAMELFDRMEVRP---NCHALIALVNACSCLGNLAAGRRIHSQ 166
Query: 200 IIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM---AWKNVVSWTAMLVGYGQNGCS 256
I D ++N +G+AL+ MY KC S+ A+ F + + ++VV+W AM+ + +NG +
Sbjct: 167 ISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSA 226
Query: 257 EEAVKIFCNMQRNGI-EPDDFTLGSVISSC--ANLASLEEGTQFHGRSLVTGLISFITVS 313
EA+++F +M R+G P+ T SV+ SC A L SLE+ HGR + G+ V
Sbjct: 227 REALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVR 286
Query: 314 NALVTFYGKCGNIEDSHRLF----NEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
ALV YGK G+++D+ +F +E V+ +A++S + G E++ LF M
Sbjct: 287 TALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRLFFAMNL 346
Query: 370 HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLE 429
G KP VTL+ VL+ACS + E ++ + T ++ +R+ L
Sbjct: 347 EGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLP 406
Query: 430 EAKSFINKMPFPPDAIGWATLLSS 453
A++ + + PD + W + ++
Sbjct: 407 RARATFDAIQ-SPDVVSWNAMAAA 429
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 175/335 (52%), Gaps = 38/335 (11%)
Query: 176 TFGSVLTACGGLLALEEGKQIHAFII--RNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
T+G +L ACG L AL++G+++HA I+ R D ++ F+ S L+ M+ KC ++ AE++
Sbjct: 45 TYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALAD 104
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE 293
A +V S TAM+ + ++G ++A+++F M+ + P+ L +++++C+ L +L
Sbjct: 105 RFA--SVYSCTAMIRAWMEHGRPDKAMELFDRME---VRPNCHALIALVNACSCLGNLAA 159
Query: 294 GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM---NVRDEVSWTALVSG 350
G + H + + NAL++ Y KCG++ D+ + F+ + + RD V+W A++S
Sbjct: 160 GRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISA 219
Query: 351 YAKFGKANETIDLFEKMLSHGL-KPDEVTLIGVLSACSRAGLVE-------KGRHYFEIM 402
+ + G A E + LF M G P+ VT + VL +C AGL+ GR +
Sbjct: 220 FLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGI 279
Query: 403 VKEYGIRPIHDHYTCMIDILSRAGRLEEA-KSFINKMPFPPDA--IGWATLLSSCRIHGN 459
+E +R T ++D + G L++A + F+ K P + + ++S+C +G
Sbjct: 280 EREAFVR------TALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNG- 332
Query: 460 VEIGKWAAESL-----LELDPYNPASYVLLSSIYA 489
W ESL + L+ P+ L+S + A
Sbjct: 333 -----WPQESLRLFFAMNLEGTKPSGVTLVSVLNA 362
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 120/252 (47%), Gaps = 46/252 (18%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D ++WN +++ + HG +A +++ M + L +++TF +L S+SR + GR+I
Sbjct: 525 DCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREI 584
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP--EKNIVMYNTMITGLLRRG 122
H ++ GF S + + L++MYAK G + DA+ FD+ +++++ + ++I G + G
Sbjct: 585 HARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYG 644
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
E + +LF WT M+ +G+ + TF S LT
Sbjct: 645 QAERALKLF----------WT---------------------MQQQGVRPNHVTFISALT 673
Query: 183 ACGGLLALEEGKQI-------HAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
AC LE+G ++ H + + H S +VD+ +C + AE +
Sbjct: 674 ACNHGGKLEQGCELLSGMTPDHGILPASKH------FSCIVDLLGRCGRLDEAEKLLERT 727
Query: 236 AWKNVVSWTAML 247
+ +V++W A+L
Sbjct: 728 SQADVITWMALL 739
>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 754
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 242/658 (36%), Positives = 373/658 (56%), Gaps = 44/658 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+W L+ G + A+ V+ ML G S T S +L SS + + L
Sbjct: 125 MPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAG-SYPSIYTLSAVLHACSSLQSLKL 183
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q H +I+K+ VGS L +Y+K G + DA + F +
Sbjct: 184 GDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRI----------------- 226
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
++K+ ISWT+ ++ NG + + LF EM E + ++FT S
Sbjct: 227 --------------REKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSA 272
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+ C + +LE G Q+ + I+ ++ N+ V ++L+ +Y K I A F M ++
Sbjct: 273 LSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSM 332
Query: 241 VSWTAMLVGYGQ---------NGCSE--EAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
V+W AM+ G+ Q + C EA+KIF + ++G++PD FTL SV+S C+ +
Sbjct: 333 VTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRML 392
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
++E+G Q H +++ TG +S + VS +L++ Y KCG+IE + + F EM+ R ++WT++++
Sbjct: 393 AIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMSTRTMIAWTSMIT 452
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
G+++ G + + + +FE M G++P+ VT +GVLSACS AG+V + +YFEIM K+Y I+
Sbjct: 453 GFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIK 512
Query: 410 PIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAES 469
P+ DHY CM+D+ R GRLE+A +FI KM + P W+ ++ CR HGN+E+G +A+E
Sbjct: 513 PVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRSHGNLELGFYASEQ 572
Query: 470 LLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSA 529
LL L P +P +YVLL ++Y S ++D VS++R+ M + V K SWI K +V+ F
Sbjct: 573 LLSLKPKDPETYVLLLNMYLSADRFDDVSRVRKMMEVEKVGKLKDWSWISIKDKVYSFKT 632
Query: 530 DDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLN-HHSEKLAIAFG 588
+D + P S I LE L K GY S + D E EK +HSEKLAI FG
Sbjct: 633 NDKTHPPSSLICKSLEDLLAKAKNLGYEMLESVEISDEEEEEKTSSPTIYHSEKLAITFG 692
Query: 589 LLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDF 646
L +P PIRVVK+ +C D HN K +S +T REI+V+D+ R H F NGECSCG+F
Sbjct: 693 LENLPNSSPIRVVKSTLICRDSHNFIKCVSTLTGREIIVKDSKRLHKFVNGECSCGNF 750
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 138/468 (29%), Positives = 224/468 (47%), Gaps = 48/468 (10%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P G S + S +H +A+ L+ K+G ++ + +L +R
Sbjct: 28 PPEKGQSISFQKSHRFTHLDFGEAL----LLNKEGTEEEEKLFYVPLLQQCLDKRSYSGT 83
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+ +HGH++K G FV S LV++YAK G + DA
Sbjct: 84 QIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDA------------------------- 118
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
RR+F M ++ ++WTT++ G +QN + AI +F+EM G +T +VL
Sbjct: 119 ------RRVFENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVL 172
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
AC L +L+ G Q HA+II+ + VGSAL +Y KC ++ A F + KNV+
Sbjct: 173 HACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVI 232
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SWT+ + G NG + +++F M I+P++FTL S +S C + SLE GTQ
Sbjct: 233 SWTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLC 292
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF------- 354
+ G S + V N+L+ Y K G I ++HR FN M+ V+W A+++G+A+
Sbjct: 293 IKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDN 352
Query: 355 ----GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP 410
+ +E + +F K+ G+KPD TL VLS CSR +E+G +K +
Sbjct: 353 LSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSD 412
Query: 411 IHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ T +I + ++ G +E A +M I W ++++ HG
Sbjct: 413 VIVS-TSLISMYNKCGSIERASKAFLEMS-TRTMIAWTSMITGFSQHG 458
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 243/644 (37%), Positives = 372/644 (57%), Gaps = 46/644 (7%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL--GRQI 64
VSWNLLI + + NDA+ ++ +L D + + +F+ ++ R L G+QI
Sbjct: 81 VSWNLLIKCYIENQRSNDAIALFCKLLCDFVPD----SFTLPCVLKGCARLGALQEGKQI 136
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG +LK GFG FV S LV MY+K G I ++ FD + +K++V +N++I G R G +
Sbjct: 137 HGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEI 196
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
E + +F M +KDS SWT +I GL ++G A D+F M
Sbjct: 197 ELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRMP------------------ 238
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
IRN N A+++ Y K A+ +F M +++V+W
Sbjct: 239 ----------------IRNSVSWN-----AMINGYMKAGDSNTAKELFDQMPERSLVTWN 277
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
+M+ GY +N +A+K+F M R I P+ T+ +S+ + + SL G H + +
Sbjct: 278 SMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKS 337
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G + + L+ Y KCG+++ + R+F + + WT+++ G G +T++LF
Sbjct: 338 GFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELF 397
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
++M GLKP +T IGVL+ACS AG E YF++M +YGI+P +HY C+ID+L R
Sbjct: 398 DEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCR 457
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG LEEAK I +MP + + W +LLS R HGN+ +G++AA+ L++L P YV+L
Sbjct: 458 AGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVIL 517
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S++YA+ G W+ V Q+R M++KG++KDPGCS I+++ +H F D S P +++IY +L
Sbjct: 518 SNMYAAAGLWEKVRQVREMMKKKGMKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKL 577
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVEL-SEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
++ +K+ G++PD + VL +E +EK L HSE+LAIAFGLL I G PIR++KN
Sbjct: 578 CEMKKKLNVAGHIPDTTQVLLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKN 637
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LR+C+DCH TK +S I REI++RD RFH FK+G CSC DFW
Sbjct: 638 LRICNDCHAVTKLLSHIYNREIIIRDGSRFHHFKSGSCSCKDFW 681
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 197/401 (49%), Gaps = 49/401 (12%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSWN LI G+A G + A++++ M + + +FS +
Sbjct: 179 DVVSWNSLIDGYARCGEIELALEMFEEMPE-------KDSFSWTI--------------- 216
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
L+D +K G + A+ FD +P +N V +N MI G ++ G
Sbjct: 217 ------------------LIDGLSKSGKLEAARDVFDRMPIRNSVSWNAMINGYMKAGDS 258
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
++ LF M ++ ++W +MITG +N +A+ LF M E ++ + T ++A
Sbjct: 259 NTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSAA 318
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G+++L G+ +H++I+++ K + +G+ L++MY KC S+K A VFR++ K + WT
Sbjct: 319 SGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWT 378
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHGRSLV 303
+++VG G +G E+ +++F M R G++P T V+++C++ E+ + F +
Sbjct: 379 SVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYD 438
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKANETID 362
G+ I L+ + G++E++ M ++ ++V WT+L+SG K G I
Sbjct: 439 YGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHG----NIR 494
Query: 363 LFEKMLSH--GLKPDEVTLIGVLSAC-SRAGLVEKGRHYFE 400
+ E H L PD +LS + AGL EK R E
Sbjct: 495 MGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVRE 535
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 161/329 (48%), Gaps = 25/329 (7%)
Query: 192 EGKQIHAFIIRNDHKDNVFVGSALVDMYC--KCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
E Q+HA I+ ++ V S L+ +Y + +++YA S+F + +VSW ++
Sbjct: 30 EANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLIKC 89
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
Y +N S +A+ +FC + + + PD FTL V+ CA L +L+EG Q HG L G
Sbjct: 90 YIENQRSNDAIALFCKLLCDFV-PDSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVD 148
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
V ++LV+ Y KCG IE ++F+ M +D VSW +L+ GYA+ G+ +++FE+M
Sbjct: 149 KFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEM-- 206
Query: 370 HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD--HYTCMIDILSRAGR 427
+ D + ++ S++G +E R F+ M PI + + MI+ +AG
Sbjct: 207 --PEKDSFSWTILIDGLSKSGKLEAARDVFDRM-------PIRNSVSWNAMINGYMKAGD 257
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSI 487
AK ++MP + W ++++ + E +L D +P +L ++
Sbjct: 258 SNTAKELFDQMP-ERSLVTWNSMITGYERNKQFTKALKLFEVMLRED-ISPNYTTILGAV 315
Query: 488 YASK-------GKWDHVSQLRRTMREKGV 509
A+ G+W H ++ + GV
Sbjct: 316 SAASGMVSLGTGRWVHSYIVKSGFKTDGV 344
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 122/259 (47%), Gaps = 40/259 (15%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTML-IMSSSRRCVD 59
MP V+WN +I+G+ + A+K++ +ML++ + ++T+L +S++ V
Sbjct: 268 MPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISP----NYTTILGAVSAASGMVS 323
Query: 60 L--GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
L GR +H +I+K GF + +G+ L++MY+K G + A R F +P+K + + ++I G
Sbjct: 324 LGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVG 383
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
L GLVE++ ++LF EM GL TF
Sbjct: 384 LGMHGLVEQT-------------------------------LELFDEMCRTGLKPHAITF 412
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRN-DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
VL AC E+ + + + K ++ L+D+ C+ ++ A+ M
Sbjct: 413 IGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMP 472
Query: 237 WK-NVVSWTAMLVGYGQNG 254
K N V WT++L G ++G
Sbjct: 473 IKANKVIWTSLLSGSRKHG 491
>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
Length = 916
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 254/659 (38%), Positives = 366/659 (55%), Gaps = 48/659 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + VSWN +I+ A G + A +Y M ++G ++ITF T L + S DL
Sbjct: 294 MAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGF-RPNKITFVTALKAACSSSSQDL 352
Query: 61 GRQ--IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G +HG I G V VG+ LV MY G I A+ FD +P KNI
Sbjct: 353 GESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNI---------- 402
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+SW M+T NG REA++LF M+ + LA ++ ++
Sbjct: 403 ---------------------VSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYL 441
Query: 179 SVLTACGGLLALEEGKQIHAFIIRND-HKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
+VL C + E + IHA ++ N + + +V M+ + S++ A + F
Sbjct: 442 AVLGCCEDV---SEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVV 498
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
K+ VSW + A+ F MQ G PD FTL SV+ CA+L +LE G
Sbjct: 499 KDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSI 558
Query: 298 HGR-SLVTGLISFITVSNALVTFYGKCGN-IEDSHRLFNEM--NVRDEVSWTALVSGYAK 353
+ S + + V +A++ KCG+ +++ RLF M + +D V+W +++ YA+
Sbjct: 559 QQQLSAAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQ 618
Query: 354 FGKANETIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI--RP 410
G + + LF M ++PD T + VLS CS AGLVE G H F + + GI +P
Sbjct: 619 HGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQP 678
Query: 411 IHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL 470
+ +HY C++D+L R G L EA+ FI KMP P D++ W +LL +C +G++E G+ AA +
Sbjct: 679 V-EHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAF 737
Query: 471 LELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKD-PGCSWIKYKSRVHIFSA 529
+EL + YV+LS+IYA+ G+W+ ++R M E+ V+K PG S I K+RVH F A
Sbjct: 738 IELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRAPGKSSIVVKNRVHEFFA 797
Query: 530 DDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGL 589
D S P SD+IYAELE+L + + GYVPD VLHDVE +K ++L +HSEKLAIAFGL
Sbjct: 798 RDRSHPQSDEIYAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGL 857
Query: 590 LFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLF-KNGECSCGDFW 647
+ +P IRV+KNLRVC DCH ATK+I+++TQREI VRD RFH F K+GECSCGD+W
Sbjct: 858 ISVPHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 916
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 209/461 (45%), Gaps = 41/461 (8%)
Query: 5 DGVSWNLLISGHASHGSVND-AVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQ 63
D + WN I A + D A+ + M +GL +R +F +L + L R
Sbjct: 196 DLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLP-NRASFVAILSSCGDHSSLPLARS 254
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
IH + + GF V V + LV MY R G
Sbjct: 255 IHARVEELGFLGDVVVATALVTMYG-------------------------------RCGS 283
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
V+ES +F M ++ +SW MI Q G A ++ M+ EG ++ TF + L A
Sbjct: 284 VDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKA 343
Query: 184 CGGLLA--LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+ L E +H +I + +V VG+ALV MY +I A + F + KN+V
Sbjct: 344 ACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIV 403
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW AML YG NG + EA+++F M+R + P+ + +V+ C +++ E H
Sbjct: 404 SWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVS---EARSIHAEV 460
Query: 302 LVTGLISF-ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ GL + +++N +V + + G++E++ F+ V+D VSW V+ + +
Sbjct: 461 VGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGA 520
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
I F M G +PD+ TL+ V+ C+ G +E GR + + + + +++
Sbjct: 521 ITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMN 580
Query: 421 ILSRAG-RLEEAKSFINKMPFP-PDAIGWATLLSSCRIHGN 459
++++ G ++E + +MP D + W T++++ HG+
Sbjct: 581 MVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGH 621
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 217/493 (44%), Gaps = 52/493 (10%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLM-LKDGLGNL-SRITFSTML--IMSSSRRCVDLGR 62
+WN LI+ +S +V D +Y M L++ N +R+T +L I S R
Sbjct: 91 ATWNTLIAAQSSPAAVFD---LYTRMKLEERAENRPNRLTIIAVLGAIASGDPSSSSSSR 147
Query: 63 Q----IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
+H I +FV + L+D Y K G
Sbjct: 148 AQARIVHDDIRGSDLERDLFVATALLDAYGKCG--------------------------- 180
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLER--EAIDLFREMRLEGLAMDQFT 176
VE + +F ++ D I W I N ER A+ L R M LEGL ++ +
Sbjct: 181 ----CVESALEVFSRIQVPDLICWNAAIMACAGND-ERPDRALLLVRRMWLEGLLPNRAS 235
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
F ++L++CG +L + IHA + +V V +ALV MY +C S+ + +VF MA
Sbjct: 236 FVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMA 295
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS--LEEG 294
+N VSW AM+ + Q G A I+ MQ+ G P+ T + + + + +S L E
Sbjct: 296 VRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGES 355
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
HG GL + V ALVT YG G I+ + F+ + ++ VSW A+++ Y
Sbjct: 356 AALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDN 415
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G+A E ++LF M L P++V+ + VL C V + R +V
Sbjct: 416 GRAREAMELFAAMKRQSLAPNKVSYLAVLGCCED---VSEARSIHAEVVGNGLFAQESSI 472
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
++ + +R+G LEEA + + D++ W T +++ ++ G A ++ +
Sbjct: 473 ANGVVRMFARSGSLEEAMAAFDAT-VVKDSVSWNTKVAALSAREDLH-GAITAFYTMQHE 530
Query: 475 PYNPASYVLLSSI 487
+ P + L+S +
Sbjct: 531 GFRPDKFTLVSVV 543
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 189/415 (45%), Gaps = 51/415 (12%)
Query: 55 RRCV---DL--GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIV 109
RRC+ DL GRQ+H I+K G +G+ LV MY+K + DA F L + I
Sbjct: 32 RRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRGIA 91
Query: 110 MYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG 169
+NT+I V DL+ M+LE
Sbjct: 92 TWNTLIAAQSSPAAV----------------------------------FDLYTRMKLEE 117
Query: 170 LAMDQFTFGSVLTACGGLLALE---------EGKQIHAFIIRNDHKDNVFVGSALVDMYC 220
A ++ +++ G + + + + + +H I +D + ++FV +AL+D Y
Sbjct: 118 RAENRPNRLTIIAVLGAIASGDPSSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYG 177
Query: 221 KCKSIKYAESVFRTMAWKNVVSWTAMLVG-YGQNGCSEEAVKIFCNMQRNGIEPDDFTLG 279
KC ++ A VF + +++ W A ++ G + + A+ + M G+ P+ +
Sbjct: 178 KCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFV 237
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
+++SSC + +SL H R G + + V+ ALVT YG+CG++++S +F M VR
Sbjct: 238 AILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVR 297
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVL-SACSRAGLVEKGRHY 398
+ VSW A+++ +A+ G + ++ +M G +P+++T + L +ACS +
Sbjct: 298 NHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAA 357
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+ G+ T ++ + G ++ A++ + +P + + W +L++
Sbjct: 358 LHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIP-AKNIVSWNAMLTA 411
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 124/285 (43%), Gaps = 9/285 (3%)
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
T +L C G L +G+Q+H I++ N +G+ LV MY KC+S+ A + F +
Sbjct: 26 TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN------LA 289
+ + +W ++ + +R P+ T+ +V+ + A+ +
Sbjct: 86 RSRGIATWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGAIASGDPSSSSS 145
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
S + H + L + V+ AL+ YGKCG +E + +F+ + V D + W A +
Sbjct: 146 SRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIM 205
Query: 350 GYA-KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
A + + + L +M GL P+ + + +LS+C + R V+E G
Sbjct: 206 ACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARS-IHARVEELGF 264
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
T ++ + R G ++E+ + M + + W ++++
Sbjct: 265 LGDVVVATALVTMYGRCGSVDESIAVFEAMAV-RNHVSWNAMIAA 308
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/648 (37%), Positives = 358/648 (55%), Gaps = 34/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V WN +ISG + + D+++V+ ML GL + T +T+L + + L
Sbjct: 174 MPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGL-SFDSTTLATVLTAVAELQEYRL 232
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G I K G S V+V + L+ +Y+K G + +G
Sbjct: 233 GMGIQCLASKKGLHSDVYVLTGLISLYSKCG---KSCKG--------------------- 268
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
R LF + D IS+ MI+G N A+ LFRE+ G ++ T +
Sbjct: 269 -------RILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGL 321
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ L+ + I ++ V +AL +YC+ +++A +F K++
Sbjct: 322 IPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSL 381
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
SW AM+ GY QNG ++ A+ +F M + P+ T+ S++S+CA L +L G HG
Sbjct: 382 ASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGL 440
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
L S + VS ALV Y KCG+I ++ +LF+ M ++ V+W A+++GY G E
Sbjct: 441 IKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEA 500
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LF +ML G+ P VT + +L ACS +GLV +G F M YG +P+ +HY CM+D
Sbjct: 501 LKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVD 560
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
IL RAG+L A FI +MP P W LL +C IH N E+ A++ L +LDP N
Sbjct: 561 ILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGY 620
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS+IY++ + + +R+ ++++ + K PGC+ I+ + ++F++ D S P + I
Sbjct: 621 YVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAI 680
Query: 541 YAELEKLNRKMIKEGYVPD-MSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
+ LEKL KM + GY + +++ LHDVE EK M+N HSEKLAIAFGL+ PG IR
Sbjct: 681 FEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIR 740
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
++KNLRVC DCH ATK+ISKIT+R I+VRDA RFH FKNG CSCGD+W
Sbjct: 741 IIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/485 (26%), Positives = 225/485 (46%), Gaps = 43/485 (8%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD--LGRQIHG 66
+N+LI G + +G ++ +Y + K NL F+ +S++ R D +G +H
Sbjct: 80 FNVLIRGFSDNGLPKSSIFLYTHLRKXT--NLRPDNFTYAFAISAASRLEDERVGVLLHA 137
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
H + G S +FVGS +VD+Y K A++ FD +PE++ V++NTMI+G R E+
Sbjct: 138 HSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFED 197
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
S R+F M D GL+ D T +VLTA
Sbjct: 198 SIRVFVDMLDV-------------------------------GLSFDSTTLATVLTAVAE 226
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L G I + +V+V + L+ +Y KC +F + +++S+ AM
Sbjct: 227 LQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAM 286
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ GY N +E AV +F + +G + TL +I L+ SL G+
Sbjct: 287 ISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGI 346
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
I +VS AL T Y + ++ + +LF+E + SW A++SGY + G + I LF++
Sbjct: 347 ILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQE 406
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M+ L P+ VT+ +LSAC++ G + G+ + ++K + T ++D+ ++ G
Sbjct: 407 MMPQ-LSPNPVTVTSILSACAQLGALSIGK-WVHGLIKSERLESNVYVSTALVDMYAKCG 464
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL--DPYNPASYVLL 484
+ EA+ + M + + W +++ +HG+ GK A + E+ P L
Sbjct: 465 SIVEARQLFDLM-VDKNVVTWNAMITGYGLHGH---GKEALKLFYEMLQSGIPPTGVTFL 520
Query: 485 SSIYA 489
S +YA
Sbjct: 521 SILYA 525
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 187/424 (44%), Gaps = 38/424 (8%)
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR-LEGLAMDQFTFGSV 180
G V R+LF + D + +I G NGL + +I L+ +R L D FT+
Sbjct: 60 GAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFA 119
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
++A L G +HA I + N+FVGSA+VD+Y K + A VF M ++
Sbjct: 120 ISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDT 179
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V W M+ G+ +N E+++++F +M G+ D TL +V+++ A L G
Sbjct: 180 VLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCL 239
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ GL S + V L++ Y KCG LF++++ D +S+ A++SGY +
Sbjct: 240 ASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESA 299
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI------------ 408
+ LF ++L+ G + + TL+G++ ++ R + +K GI
Sbjct: 300 VTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLK-IGIILQPSVSTALTT 358
Query: 409 -----------RPIHDH--------YTCMIDILSRAGRLEEAKSFINKM--PFPPDAIGW 447
R + D + MI ++ G + A S +M P+ +
Sbjct: 359 VYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTV 418
Query: 448 ATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYV--LLSSIYASKGKWDHVSQLRRTMR 505
++LS+C G + IGKW L++ + YV L +YA G QL M
Sbjct: 419 TSILSACAQLGALSIGKW-VHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMV 477
Query: 506 EKGV 509
+K V
Sbjct: 478 DKNV 481
>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/642 (35%), Positives = 376/642 (58%), Gaps = 32/642 (4%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW+ L+ G+ G V + + ++ ++ + F+ +L + V G+Q HG
Sbjct: 93 VSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHG 152
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++LK G + +V + L+ MY++ + A + D +P ++ YN++++
Sbjct: 153 YLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSA--------- 203
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
L+++G EA + + M E + D T+ SVL C
Sbjct: 204 ----------------------LVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQ 241
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+ L+ G QIHA +++ +VFV S L+D Y KC + A F + +NVV+WTA+
Sbjct: 242 IRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAV 301
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
L Y QNG EE + +F M+ P++FT ++++CA+L +L G HGR +++G
Sbjct: 302 LTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGF 361
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ + V NAL+ Y K GNI+ S+ +F+ M RD ++W A++ GY+ G + + +F+
Sbjct: 362 KNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQD 421
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M+S G P+ VT IGVLSAC LV++G +YF+ ++K++ + P +HYTCM+ +L RAG
Sbjct: 422 MMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAG 481
Query: 427 RLEEAKSFI-NKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
L+EA++F+ D + W TLL++C IH N +GK E+++++DP++ +Y LLS
Sbjct: 482 LLDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQITETVIQMDPHDVGTYTLLS 541
Query: 486 SIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELE 545
+++A KWD V ++R+ M+E+ ++K+PG SW+ ++ H+F ++ + P S QI+ +++
Sbjct: 542 NMHAKARKWDGVVKIRKLMKERNIKKEPGASWLDIRNNTHVFVSEGSNHPESTQIFEKVQ 601
Query: 546 KLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
+L + GY PD+ VLHDVE +K L+HHSEKLA+A+GL+ IPP PIR++KNLR
Sbjct: 602 QLLAMIKPLGYAPDVGVVLHDVEDEQKEGYLSHHSEKLALAYGLMKIPPPGPIRIIKNLR 661
Query: 606 VCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+C DCH A K ISK T R I+VRDA RFH F+ G C+C D W
Sbjct: 662 MCDDCHIAVKLISKATNRLIIVRDANRFHHFREGLCTCNDHW 703
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 143/277 (51%), Gaps = 6/277 (2%)
Query: 189 ALEEGKQIHA-FIIRND-HKD-NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
+L GK IHA ++RN KD ++ ++L+++Y KC K A +F M +NVVSW+A
Sbjct: 38 SLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSA 97
Query: 246 MLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
+++GY G E + +F N+ + P+++ V+S CA+ ++EG Q HG L +
Sbjct: 98 LMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKS 157
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
GL+ V NAL+ Y +C +++ + ++ + + D S+ +++S + G E +
Sbjct: 158 GLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVL 217
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
++M+ + D VT + VL C++ ++ G ++K + + T +ID +
Sbjct: 218 KRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSST-LIDTYGK 276
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
G + A+ + + + + W +L++ +G+ E
Sbjct: 277 CGEVLNARKQFDGLR-DRNVVAWTAVLTAYLQNGHFE 312
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 9/178 (5%)
Query: 286 ANLASLEEGTQFHGRSLV---TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
A SL G H + +V T S IT N+L+ Y KCG + + +LF+ M R+ V
Sbjct: 34 ATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRMLQRNVV 93
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLS-HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEI 401
SW+AL+ GY G+ E + LF ++S P+E VLS C+ +G V++G+
Sbjct: 94 SWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGY 153
Query: 402 MVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP----FPPDAIGWATLLSSCR 455
++K G+ +I + SR ++ A ++ +P F ++I A + S CR
Sbjct: 154 LLKS-GLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCR 210
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/648 (37%), Positives = 358/648 (55%), Gaps = 34/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V WN +ISG + + D+++V+ ML GL + T +T+L + + L
Sbjct: 174 MPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGL-SFDSTTLATVLTAVAELQEYRL 232
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G I K G S V+V + L+ +Y+K G + +G
Sbjct: 233 GMGIQCLASKKGLHSDVYVLTGLISLYSKCG---KSCKG--------------------- 268
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
R LF + D IS+ MI+G N A+ LFRE+ G ++ T +
Sbjct: 269 -------RILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGL 321
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ L+ + I ++ V +AL +YC+ +++A +F K++
Sbjct: 322 IPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSL 381
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
SW AM+ GY QNG ++ A+ +F M + P+ T+ S++S+CA L +L G HG
Sbjct: 382 ASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGL 440
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
L S + VS ALV Y KCG+I ++ +LF+ M ++ V+W A+++GY G E
Sbjct: 441 IKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEA 500
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LF +ML G+ P VT + +L ACS +GLV +G F M YG +P+ +HY CM+D
Sbjct: 501 LKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVD 560
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
IL RAG+L A FI +MP P W LL +C IH N E+ A++ L +LDP N
Sbjct: 561 ILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGY 620
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS+IY++ + + +R+ ++++ + K PGC+ I+ + ++F++ D S P + I
Sbjct: 621 YVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAI 680
Query: 541 YAELEKLNRKMIKEGYVPD-MSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
+ LEKL KM + GY + +++ LHDVE EK M+N HSEKLAIAFGL+ PG IR
Sbjct: 681 FEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIR 740
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
++KNLRVC DCH ATK+ISKIT+R I+VRDA RFH FKNG CSCGD+W
Sbjct: 741 IIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/485 (26%), Positives = 225/485 (46%), Gaps = 43/485 (8%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD--LGRQIHG 66
+N+LI G + +G ++ +Y + K NL F+ +S++ R D +G +H
Sbjct: 80 FNVLIRGFSDNGLPKSSIFLYTHLRKKT--NLRPDNFTYAFAISAASRLEDERVGVLLHA 137
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
H + G S +FVGS +VD+Y K A++ FD +PE++ V++NTMI+G R E+
Sbjct: 138 HSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFED 197
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
S R+F M D GL+ D T +VLTA
Sbjct: 198 SIRVFVDMLDV-------------------------------GLSFDSTTLATVLTAVAE 226
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L G I + +V+V + L+ +Y KC +F + +++S+ AM
Sbjct: 227 LQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAM 286
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ GY N +E AV +F + +G + TL +I L+ SL G+
Sbjct: 287 ISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGI 346
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
I +VS AL T Y + ++ + +LF+E + SW A++SGY + G + I LF++
Sbjct: 347 ILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQE 406
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M+ L P+ VT+ +LSAC++ G + G+ + ++K + T ++D+ ++ G
Sbjct: 407 MMPQ-LSPNPVTVTSILSACAQLGALSIGK-WVHGLIKSERLESNVYVSTALVDMYAKCG 464
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL--DPYNPASYVLL 484
+ EA+ + M + + W +++ +HG+ GK A + E+ P L
Sbjct: 465 SIVEARQLFDLM-VDKNVVTWNAMITGYGLHGH---GKEALKLFYEMLQSGIPPTGVTFL 520
Query: 485 SSIYA 489
S +YA
Sbjct: 521 SILYA 525
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 188/424 (44%), Gaps = 38/424 (8%)
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQFTFGSV 180
G V R+LF + D + +I G NGL + +I L+ +R + L D FT+
Sbjct: 60 GAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFA 119
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
++A L G +HA I + N+FVGSA+VD+Y K + A VF M ++
Sbjct: 120 ISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDT 179
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V W M+ G+ +N E+++++F +M G+ D TL +V+++ A L G
Sbjct: 180 VLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCL 239
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ GL S + V L++ Y KCG LF++++ D +S+ A++SGY +
Sbjct: 240 ASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESA 299
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI------------ 408
+ LF ++L+ G + + TL+G++ ++ R + +K GI
Sbjct: 300 VTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLK-IGIILQPSVSTALTT 358
Query: 409 -----------RPIHDH--------YTCMIDILSRAGRLEEAKSFINKM--PFPPDAIGW 447
R + D + MI ++ G + A S +M P+ +
Sbjct: 359 VYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTV 418
Query: 448 ATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYV--LLSSIYASKGKWDHVSQLRRTMR 505
++LS+C G + IGKW L++ + YV L +YA G QL M
Sbjct: 419 TSILSACAQLGALSIGKW-VHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMV 477
Query: 506 EKGV 509
+K V
Sbjct: 478 DKNV 481
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 244/675 (36%), Positives = 377/675 (55%), Gaps = 39/675 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP S+N L++G+ + + A+ ++ M L +++ ++ S RR
Sbjct: 43 MPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA-----SYNALISGLSLRR--QT 95
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+ F V + L+ Y + GL+ DA R F ++PE+N V Y ++ GLL
Sbjct: 96 LPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLD 155
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR----------LEGL 170
G V E+RRLF M D+D ++WT M++G Q G EA LF EM + G
Sbjct: 156 AGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGY 215
Query: 171 AMD-----------------QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGS 213
A + + ++ ++L +E+ ++ F +H V +
Sbjct: 216 AQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAEL--FNAMPEHP--VAACN 271
Query: 214 ALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEP 273
A++ + + + A++VF M ++ +W+AM+ Y QN EA+ F M G+ P
Sbjct: 272 AMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRP 331
Query: 274 DDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLF 333
+ ++ S+++ CA LA L+ G + H L + +AL+T Y KCGN++ + R+F
Sbjct: 332 NYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVF 391
Query: 334 NEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVE 393
+ +D V W ++++GYA+ G + + +F M G+ PD +T IG L+ACS G V+
Sbjct: 392 HTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVK 451
Query: 394 KGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+GR F M IRP +HY+CM+D+L R+G +EEA I MP PDA+ W L+ +
Sbjct: 452 EGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGA 511
Query: 454 CRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDP 513
CR+H N EI ++AA+ LLEL+P N YVLLS IY S G+W+ S++R+ + + + K P
Sbjct: 512 CRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSP 571
Query: 514 GCSWIKYKSRVHIFSADD-WSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEK 572
GCSWI+Y RVH+F++ D + P I LEKL+ +++ GY D S VLHD++ +K
Sbjct: 572 GCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQK 631
Query: 573 IKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVR 632
L +HSE+ A+A+GLL IP G+PIRV+KNLRVC DCH+A K I+KIT REI++RDA R
Sbjct: 632 SHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANR 691
Query: 633 FHLFKNGECSCGDFW 647
FH FK+G CSC D+W
Sbjct: 692 FHHFKDGFCSCRDYW 706
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 186/410 (45%), Gaps = 63/410 (15%)
Query: 88 AKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMIT 147
A+ G I A+ F+ +P + YN ++ G R L + + LFR M +D S+ +I+
Sbjct: 28 ARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALIS 87
Query: 148 GL---------------------------------MQNGLEREAIDLFREMRLEGLAMDQ 174
GL +++GL +AI LF++ M +
Sbjct: 88 GLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQ-------MPE 140
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIKYAESVFR 233
S GGL L+ G+ A + ++ D +V +A++ YC+ I A ++F
Sbjct: 141 RNHVSYTVLLGGL--LDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFD 198
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISS-CANLASL 291
M +NVVSWTAM+ GY QNG A K+F M +RN + +G + + + A L
Sbjct: 199 EMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAEL 258
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
H + NA++ +G+ G ++ + +F +M RD+ +W+A++ Y
Sbjct: 259 FNAMPEHP----------VAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAY 308
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK---EYGI 408
+ E + F +ML G++P+ ++I +L+ C+ +++ GR M++ + +
Sbjct: 309 EQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDV 368
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ + +I + + G L++AK + P D + W ++++ HG
Sbjct: 369 FAV----SALITMYIKCGNLDKAKRVFHTFE-PKDIVMWNSMITGYAQHG 413
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 88/225 (39%), Gaps = 42/225 (18%)
Query: 314 NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGL- 372
NA + + GNIE + F M +R S+ AL++GY + + + LF +M S L
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 373 ----------------------------KPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
P V+ +L R GL+ F+ M +
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
H YT ++ L AGR+ EA+ ++MP D + W +LS G + G+
Sbjct: 141 RN-----HVSYTVLLGGLLDAGRVNEARRLFDEMP-DRDVVAWTAMLS-----GYCQAGR 189
Query: 465 WAAESLL--ELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREK 507
L E+ N S+ + S YA G+ + +L M E+
Sbjct: 190 ITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPER 234
>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
Length = 920
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 254/659 (38%), Positives = 366/659 (55%), Gaps = 48/659 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + VSWN +I+ A G + A +Y M ++G ++ITF T L + S DL
Sbjct: 298 MAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGF-RPNKITFVTALKAACSSSSQDL 356
Query: 61 GRQ--IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G +HG I G V VG+ LV MY G I A+ FD +P KNI
Sbjct: 357 GESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNI---------- 406
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+SW M+T NG REA++LF M+ + LA ++ ++
Sbjct: 407 ---------------------VSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYL 445
Query: 179 SVLTACGGLLALEEGKQIHAFIIRND-HKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
+VL C + E + IHA ++ N + + +V M+ + S++ A + F
Sbjct: 446 AVLGCCEDV---SEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVV 502
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
K+ VSW + A+ F MQ G PD FTL SV+ CA+L +LE G
Sbjct: 503 KDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSI 562
Query: 298 HGR-SLVTGLISFITVSNALVTFYGKCGN-IEDSHRLFNEM--NVRDEVSWTALVSGYAK 353
+ S + + V++A++ KCG+ +++ RLF M + +D V+W +++ YA+
Sbjct: 563 QQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQ 622
Query: 354 FGKANETIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI--RP 410
G + + LF M ++PD T + VLS CS AGLVE G H F + + GI +P
Sbjct: 623 HGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQP 682
Query: 411 IHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL 470
+ +HY C++D+L R G L EA+ FI KMP P D++ W +LL +C +G++E G+ AA +
Sbjct: 683 V-EHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAF 741
Query: 471 LELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKD-PGCSWIKYKSRVHIFSA 529
+EL + YV+LS+IYA+ G+W+ ++R M E+ V+K PG S I K+RVH F A
Sbjct: 742 IELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRVPGKSSIVVKNRVHEFFA 801
Query: 530 DDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGL 589
D S P SD IYAELE+L + + GYVPD VLHDVE +K ++L +HSEKLAIAFGL
Sbjct: 802 RDRSHPQSDAIYAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGL 861
Query: 590 LFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLF-KNGECSCGDFW 647
+ +P IRV+KNLRVC DCH ATK+I+++TQREI VRD RFH F K+GECSCGD+W
Sbjct: 862 ISVPHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 920
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 209/461 (45%), Gaps = 41/461 (8%)
Query: 5 DGVSWNLLISGHASHGSVND-AVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQ 63
D + WN I A + D A+ + M +GL +R +F +L + L R
Sbjct: 200 DLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLP-NRASFVAILSSCGDHSSLPLARS 258
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
IH + + GF V V + LV MY R G
Sbjct: 259 IHARVEELGFLGDVVVATALVTMYG-------------------------------RCGS 287
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
V+ES +F M ++ +SW MI Q G A ++ M+ EG ++ TF + L A
Sbjct: 288 VDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKA 347
Query: 184 CGGLLA--LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+ L E +H +I + +V VG+ALV MY +I A + F + KN+V
Sbjct: 348 ACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIV 407
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW AML YG NG + EA+++F M+R + P+ + +V+ C +++ E H
Sbjct: 408 SWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVS---EARSIHAEV 464
Query: 302 LVTGLISF-ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ GL + +++N +V + + G++E++ F+ V+D VSW V+ + +
Sbjct: 465 VGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDLHGA 524
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
I F M G +PD+ TL+ V+ C+ G +E GR + + + + +++
Sbjct: 525 ITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVMN 584
Query: 421 ILSRAG-RLEEAKSFINKMPFP-PDAIGWATLLSSCRIHGN 459
++++ G ++E + +MP D + W T++++ HG+
Sbjct: 585 MVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGH 625
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 129/496 (26%), Positives = 218/496 (43%), Gaps = 56/496 (11%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLM-LKDGLGNL-SRITFSTMLIMSSS----------R 55
+WN LI+ +S +V D +Y M L++ N +++T +L +S
Sbjct: 92 TWNTLIAAQSSPAAVFD---LYTRMKLEERAENRPNKLTIIAVLGAIASGDPSSSSSSRA 148
Query: 56 RCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
+ R +H I +FV + L+D Y K G
Sbjct: 149 PSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCG------------------------ 184
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLER--EAIDLFREMRLEGLAMD 173
VE + +F ++ D I W I N ER A+ L R M LEGL +
Sbjct: 185 -------CVESALEVFSRIQVPDLICWNAAIMACAGND-ERPDRALLLVRRMWLEGLLPN 236
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
+ +F ++L++CG +L + IHA + +V V +ALV MY +C S+ + +VF
Sbjct: 237 RASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFE 296
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS--L 291
MA +N VSW AM+ + Q G A I+ MQ+ G P+ T + + + + +S L
Sbjct: 297 AMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDL 356
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
E HG GL + V ALVT YG G I+ + F+ + ++ VSW A+++ Y
Sbjct: 357 GESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAY 416
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
G+A E ++LF M L P++V+ + VL C V + R +V
Sbjct: 417 GDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCED---VSEARSIHAEVVGNGLFAQE 473
Query: 412 HDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL 471
++ + +R+G LEEA + + D++ W T +++ ++ G A +
Sbjct: 474 SSIANGVVRMFARSGSLEEAVAAFDAT-VVKDSVSWNTKVAALSAREDLH-GAITAFYTM 531
Query: 472 ELDPYNPASYVLLSSI 487
+ + + P + L+S +
Sbjct: 532 QHEGFRPDKFTLVSVV 547
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 189/419 (45%), Gaps = 55/419 (13%)
Query: 55 RRCV---DL--GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIV 109
RRC+ DL GRQ+H I+K G +G+ LV MY+K + DA F L + I
Sbjct: 32 RRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRGIA 91
Query: 110 MYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG 169
+NT+I V DL+ M+LE
Sbjct: 92 TWNTLIAAQSSPAAV----------------------------------FDLYTRMKLEE 117
Query: 170 LAMDQFTFGSVLTACGGLLA-------------LEEGKQIHAFIIRNDHKDNVFVGSALV 216
A ++ +++ G + + + + + +H I +D + ++FV +AL+
Sbjct: 118 RAENRPNKLTIIAVLGAIASGDPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALL 177
Query: 217 DMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG-YGQNGCSEEAVKIFCNMQRNGIEPDD 275
D Y KC ++ A VF + +++ W A ++ G + + A+ + M G+ P+
Sbjct: 178 DAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNR 237
Query: 276 FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNE 335
+ +++SSC + +SL H R G + + V+ ALVT YG+CG++++S +F
Sbjct: 238 ASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEA 297
Query: 336 MNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVL-SACSRAGLVEK 394
M VR+ VSW A+++ +A+ G + ++ +M G +P+++T + L +ACS +
Sbjct: 298 MAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLG 357
Query: 395 GRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+ G+ T ++ + G ++ A++ + +P + + W +L++
Sbjct: 358 ESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIP-AKNIVSWNAMLTA 415
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 124/289 (42%), Gaps = 13/289 (4%)
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
T +L C G L +G+Q+H I++ N +G+ LV MY KC+S+ A + F +
Sbjct: 26 TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN-------- 287
+ + +W ++ + +R P+ T+ +V+ + A+
Sbjct: 86 RSRGIATWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGAIASGDPSSSSS 145
Query: 288 --LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
S+ + H + L + V+ AL+ YGKCG +E + +F+ + V D + W
Sbjct: 146 SRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWN 205
Query: 346 ALVSGYA-KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
A + A + + + L +M GL P+ + + +LS+C + R V+
Sbjct: 206 AAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARS-IHARVE 264
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
E G T ++ + R G ++E+ + M + + W ++++
Sbjct: 265 ELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAV-RNHVSWNAMIAA 312
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 242/652 (37%), Positives = 369/652 (56%), Gaps = 41/652 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D SWN +I+ A G +A++ ++ M K L +R +F + SS + G+Q
Sbjct: 40 DVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYP-TRSSFPCAIKACSSLLDIFSGKQT 98
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H FG+ S +FV S L IVMY+T G +
Sbjct: 99 HQQAFVFGYQSDIFVSSAL------------------------IVMYSTC-------GKL 127
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE------GLAMDQFTFG 178
E++R++F + ++ +SWT+MI G NG +A+ LF+++ +E + +D
Sbjct: 128 EDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMV 187
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS--IKYAESVFRTMA 236
SV++AC + A + IH+F+I+ V VG+ L+D Y K + A +F +
Sbjct: 188 SVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIV 247
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEP-DDFTLGSVISSCANLASLEEGT 295
K+ VS+ +++ Y Q+G S EA +F + + + + TL +V+ + ++ +L G
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGK 307
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
H + + GL + V +++ Y KCG +E + F+ M ++ SWTA+++GY G
Sbjct: 308 CIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHG 367
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
A + ++LF M+ G++P+ +T + VL+ACS AGL + G H+F M +G+ P +HY
Sbjct: 368 HAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHY 427
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
CM+D+L RAG L++A I KM PD+I W++LL++CRIH NVE+ + + L ELDP
Sbjct: 428 GCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDP 487
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSP 535
N Y+LLS IYA G+W V ++R TM+ +G+ K PG S ++ VH+F D P
Sbjct: 488 SNCGYYMLLSHIYADSGRWKDVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHP 547
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
++IY L +LNRK+++ GYV + SSV HDV+ EK L HSEKLAIAFG++ PG
Sbjct: 548 QREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPG 607
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ VVKNLRVCSDCHN K ISKI RE +VRDA RFH FK+G CSCGD+W
Sbjct: 608 STVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGFCSCGDYW 659
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 180/360 (50%), Gaps = 41/360 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCV-- 58
+P + VSW +I G+ +G+ DAV ++ +L + + + + +M ++S C
Sbjct: 137 IPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRV 196
Query: 59 ---DLGRQIHGHILKFGFGSYVFVGSPLVDMYAK--LGLIYDAKRGFDELPEKNIVMYNT 113
L IH ++K GF V VG+ L+D YAK G + A++ FD++ +K+ V YN
Sbjct: 197 AAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYN- 255
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG-LAM 172
++++ Q+G+ EA D+FR + E +
Sbjct: 256 ------------------------------SIMSVYAQSGMSNEAFDVFRRLIKEKVVTF 285
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
+ T +VL A AL GK IH +IR +D+V VG++++DMYCKC ++ A F
Sbjct: 286 NCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAF 345
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
M KNV SWTAM+ GYG +G + +A+++F M +G+ P+ T SV+++C++ +
Sbjct: 346 DRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHD 405
Query: 293 EGTQ-FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
G F+ G+ + +V G+ G ++ ++ L +M + D + W++L++
Sbjct: 406 VGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAA 465
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 239/643 (37%), Positives = 352/643 (54%), Gaps = 33/643 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D + WN +I G+ V+ +++Y + ++ + + TF +L +G+QI
Sbjct: 49 DILLWNAIIKGYTQKNIVDAPIRMY-MDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQI 107
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG K+GFGS VFV + LV MYAK G I A
Sbjct: 108 HGQTFKYGFGSNVFVQNSLVSMYAKFGQISYA---------------------------- 139
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
R +F + D+ +SWT++I+G +QNG EA+++F+EMR + D SV+TA
Sbjct: 140 ---RIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAY 196
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+ L +GK IH + + + + +L MY K ++ A F M N++ W
Sbjct: 197 TNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWN 256
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
AM+ GY NG EEA+K+F M I D T+ S + + A + SLE G +
Sbjct: 257 AMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKS 316
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
V+ L+ Y KCG+I + +F+ + +D V W+ ++ GY G E I L+
Sbjct: 317 EYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLY 376
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+M G+ P++ T IG+L+AC +GLV++G F +M ++GI P H HY+C++D+L R
Sbjct: 377 NEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLM-PDHGIEPHHQHYSCVVDLLGR 435
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG L +A FI MP P W LLS+C+IH V +G+ AAE L LDPYN YV L
Sbjct: 436 AGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQL 495
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S++YAS W V+ +R M +KG+ KD G S I+ + F D S P S +I+ EL
Sbjct: 496 SNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEEL 555
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
++L +++ GYVP M SVLHD+ E + L HHSE+LA+A+G++ PG +R+ KNL
Sbjct: 556 DRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNL 615
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R C +CH+A K ISK+ REI++RDA RFH FK+G CSCGDFW
Sbjct: 616 RACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 658
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 175/345 (50%), Gaps = 2/345 (0%)
Query: 115 ITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
I L G V + + FR + + D + W +I G Q + I ++ +M++ + +
Sbjct: 26 INACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNC 85
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
FTF VL ACGG GKQIH + NVFV ++LV MY K I YA VF
Sbjct: 86 FTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDK 145
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
+ + VVSWT+++ GY QNG EA+ +F M++ ++PD L SV+++ N+ L +G
Sbjct: 146 LHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQG 205
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
HG GL + +L T Y K G +E + FN M + + W A++SGYA
Sbjct: 206 KSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANN 265
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G E I LF +M++ ++ D +T+ + A ++ G +E R + + + + R
Sbjct: 266 GYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELAR-WLDGYISKSEYRDDTFV 324
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
T +ID+ ++ G + A+ +++ D + W+ ++ +HG+
Sbjct: 325 NTGLIDMYAKCGSIYLARCVFDRVA-DKDVVLWSVMIMGYGLHGH 368
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 247/681 (36%), Positives = 374/681 (54%), Gaps = 66/681 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNL-SRITFSTMLIMSSSRRCVD 59
+P + +WN LI +AS + ++ L L D +L ++ TF ++ +S +
Sbjct: 85 IPQPNLYTWNTLIRAYASSSDPFQSFVIF-LDLLDKCEDLPNKFTFPFVIKAASELKASR 143
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+G +HG +K FG +++ + LV Y G + A+R
Sbjct: 144 VGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAER--------------------- 182
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
LF+G+ KD +SW +MI+ Q +A++LF +M E + + T
Sbjct: 183 ----------LFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVG 232
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL+AC L LE G+ + ++I R K ++ + +A++DMY KC S+ A+ +F M ++
Sbjct: 233 VLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERD 292
Query: 240 VVSWTAMLVGYG-------------------------------QNGCSEEAVKIFCNMQR 268
V SWT ML GY QNG +EA+ IF +Q
Sbjct: 293 VFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQL 352
Query: 269 NGI-EPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIE 327
+ I +PD+ TL S +S+CA L +++ G H G++ + ++LV Y KCG++E
Sbjct: 353 SKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLE 412
Query: 328 DSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS 387
+ +F + RD W+A+++G G+ IDLF +M +KP+ VT VL ACS
Sbjct: 413 KALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACS 472
Query: 388 RAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGW 447
AGLV++GR +F M YG+ P HY CM+DIL RAG LEEA IN+M P A W
Sbjct: 473 HAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVW 532
Query: 448 ATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREK 507
LL +C +H NVE+G+ A++ LL+L+P N + VLLS+IYA G+W+ VS+LR+ MR+
Sbjct: 533 GALLGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDT 592
Query: 508 GVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDV 567
++K+PGCS I+ VH F D + P S IY++LE++ K+ GY P+ S +L +
Sbjct: 593 ELKKEPGCSSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIATKLKSVGYEPNKSHLLQLI 652
Query: 568 ELSE-KIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREIL 626
E + K + L+ HSEKLAIAFGL+ + P PIRVVKNLR+C DCH K +S++ R+IL
Sbjct: 653 EEDDLKEQALSLHSEKLAIAFGLVTLAPSQPIRVVKNLRICGDCHAFAKLVSRVYDRDIL 712
Query: 627 VRDAVRFHLFKNGECSCGDFW 647
+RD RFH F++G CSC D+W
Sbjct: 713 LRDRYRFHHFRDGHCSCMDYW 733
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/486 (25%), Positives = 221/486 (45%), Gaps = 71/486 (14%)
Query: 24 DAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG--RQIHGHILKFGFGSYVFVGS 81
+A+ V ++ L++ + + F I+S+ +C +++H +L+ G F S
Sbjct: 2 EALSVPSISLQNFSTLNNNLLFRNHQILSTIDKCSSSKQLKEVHARMLRTGLFFDPFSAS 61
Query: 82 PLVDMYA--KLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDS 139
L A + A+ FD++P+ N+ +NT+I +S +F + DK
Sbjct: 62 KLFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDK-- 119
Query: 140 ISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAF 199
E L ++FTF V+ A L A G +H
Sbjct: 120 ---------------------------CEDLP-NKFTFPFVIKAASELKASRVGTAVHGM 151
Query: 200 IIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEA 259
I+ ++++ ++LV Y C + AE +F+ ++ K+VVSW +M+ + Q C E+A
Sbjct: 152 AIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDA 211
Query: 260 VKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTF 319
+++F M+R + P+ T+ V+S+CA LE G G+ +T+ NA++
Sbjct: 212 LELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDM 271
Query: 320 YGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF------------------------- 354
Y KCG+++D+ +LF+EM RD SWT ++ GYAK
Sbjct: 272 YTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLI 331
Query: 355 ------GKANETIDLFEKM-LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYG 407
GK E + +F ++ LS KPDEVTL+ LSAC++ G ++ G + + +K G
Sbjct: 332 SAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLG-GWIHVYIKREG 390
Query: 408 IRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAA 467
I + ++D+ ++ G LE+A + D W+ +++ +HG GK A
Sbjct: 391 IVLNCHLISSLVDMYAKCGSLEKALEVFYSVE-ERDVYVWSAMIAGLGMHGR---GKAAI 446
Query: 468 ESLLEL 473
+ E+
Sbjct: 447 DLFFEM 452
>gi|302770356|ref|XP_002968597.1| hypothetical protein SELMODRAFT_89230 [Selaginella moellendorffii]
gi|300164241|gb|EFJ30851.1| hypothetical protein SELMODRAFT_89230 [Selaginella moellendorffii]
Length = 631
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/612 (38%), Positives = 355/612 (58%), Gaps = 36/612 (5%)
Query: 41 SRIT-FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRG 99
SR+ F+++L R + GR+IH I+ G G +F+G+ L+ MY K G + DA+
Sbjct: 51 SRVAAFASLLQQCGRSRSLPDGRRIHAEIVDTGLGKDLFLGNHLIQMYGKCGAMEDARAV 110
Query: 100 FDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAI 159
F+++ N V +SWT MI+G +G E A+
Sbjct: 111 FEKIESPNSV------------------------------VSWTAMISGFALHGREDLAL 140
Query: 160 DLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDM 218
D FR+M EG+ ++ TF S+L AC ++ G IH + ++ + + VG+AL+DM
Sbjct: 141 DFFRKMVAEGVRPNEVTFVSILGACAAARDVKHGTAIHELVESSEFGRSYLSVGTALIDM 200
Query: 219 YCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
Y KC + A VF M +++V W AM+ Q G E+A+++F M G PD+ TL
Sbjct: 201 YGKCGRPELASRVFEKMERRDLVVWNAMITVCSQQGLDEQALRLFRVMDLEGHTPDEVTL 260
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFI--TVSNALVTFYGKCGNIEDSHRLFNEM 336
+ + +C+NL SL G + H L GL S I ++ ALV YG+ G +ED+ R+F +M
Sbjct: 261 VAALEACSNLNSLAAGKKLHELILDAGLDSSIKMVLATALVNMYGRYGQLEDALRVFEKM 320
Query: 337 NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR 396
N + V+WTAL++ +A+ G + IDL +M G++ D++ + VL ACS AG++E G
Sbjct: 321 NHWNLVAWTALIAAFAQHGDVH-AIDLSWRMHLEGVQADDIVFLSVLHACSHAGVLEAGL 379
Query: 397 HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRI 456
F+ MV ++G+R HY+CM+D+L+R GR+ EA+ ++ MPF P + TLL++CR+
Sbjct: 380 SCFQGMVADFGVRGGAAHYSCMVDLLARCGRVAEAEELLHSMPFEPAHMEMKTLLAACRV 439
Query: 457 HGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCS 516
G+ G A L P + A YVL+S YA+ KWD V+++R M + GV+K G S
Sbjct: 440 SGDTPRGARVARLASGLIPLDAAPYVLMSHAYAAAEKWDEVAEVRERMAKLGVKKPRGWS 499
Query: 517 WIKYKSRVHIFSADDWS-SPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKM 575
++ K+RVH F A ++S + +I EL +L + + GYVPD + H V+ +K +
Sbjct: 500 CVEVKNRVHQFFAGNFSWHSEAAEIEVELRRLQAVVKEAGYVPDTGQIGHCVQEDDKEDL 559
Query: 576 LNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHL 635
L HSE++AIAFGLL +P GLPI VVKNLRVCSDCH K IS+ R I+VRDA RFH
Sbjct: 560 LALHSERVAIAFGLLRVPAGLPIHVVKNLRVCSDCHAVAKIISRSVGRRIVVRDAYRFHR 619
Query: 636 FKNGECSCGDFW 647
F+NG CSCGD+W
Sbjct: 620 FENGTCSCGDYW 631
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 163/334 (48%), Gaps = 37/334 (11%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW +ISG A HG + A+ + M+ +G+ + +TF ++L ++ R V G IH
Sbjct: 121 VSWTAMISGFALHGREDLALDFFRKMVAEGV-RPNEVTFVSILGACAAARDVKHGTAIHE 179
Query: 67 HILKFGFG-SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
+ FG SY+ VG+ L+DMY K G A R F+++ +++V++N MIT ++GL E
Sbjct: 180 LVESSEFGRSYLSVGTALIDMYGKCGRPELASRVFEKMERRDLVVWNAMITVCSQQGLDE 239
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
++ RLFR M LEG D+ T + L AC
Sbjct: 240 QALRLFRVMD-------------------------------LEGHTPDEVTLVAALEACS 268
Query: 186 GLLALEEGKQIHAFIIRN--DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
L +L GK++H I+ D + + +ALV+MY + ++ A VF M N+V+W
Sbjct: 269 NLNSLAAGKKLHELILDAGLDSSIKMVLATALVNMYGRYGQLEDALRVFEKMNHWNLVAW 328
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQFHGRSL 302
TA++ + Q+G A+ + M G++ DD SV+ +C++ LE G + F G
Sbjct: 329 TALIAAFAQHG-DVHAIDLSWRMHLEGVQADDIVFLSVLHACSHAGVLEAGLSCFQGMVA 387
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
G+ + +V +CG + ++ L + M
Sbjct: 388 DFGVRGGAAHYSCMVDLLARCGRVAEAEELLHSM 421
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 102/241 (42%), Gaps = 36/241 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D V WN +I+ + G A++++ +M +G +T L S+ +
Sbjct: 217 MERRDLVVWNAMITVCSQQGLDEQALRLFRVMDLEG-HTPDEVTLVAALEACSNLNSLAA 275
Query: 61 GRQIHGHILKFGFGSYV--FVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G+++H IL G S + + + LV+MY + G + DA R F+++ N+V
Sbjct: 276 GKKLHELILDAGLDSSIKMVLATALVNMYGRYGQLEDALRVFEKMNHWNLV--------- 326
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+WT +I Q+G + AIDL M LEG+ D F
Sbjct: 327 ----------------------AWTALIAAFAQHG-DVHAIDLSWRMHLEGVQADDIVFL 363
Query: 179 SVLTACGGLLALEEGKQIHAFIIRN-DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
SVL AC LE G ++ + + S +VD+ +C + AE + +M +
Sbjct: 364 SVLHACSHAGVLEAGLSCFQGMVADFGVRGGAAHYSCMVDLLARCGRVAEAEELLHSMPF 423
Query: 238 K 238
+
Sbjct: 424 E 424
>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
Length = 854
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/650 (36%), Positives = 366/650 (56%), Gaps = 37/650 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+WN ++S G ++AV+ M+ G+ +TF++ L S +D+GR++
Sbjct: 235 DVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGV-RPDGVTFASALPACSRLELLDVGREM 293
Query: 65 HGHILKFG-FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
H +++K + FV S LVDMYA + A++ FD +P+ +
Sbjct: 294 HAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQL------------- 340
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQFTFGSVLT 182
GM W MI G Q G++ EA+ LF M E G + T SVL
Sbjct: 341 ---------GM-------WNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLP 384
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
AC A + +H ++++ N FV +AL+DMY + A +F + +VVS
Sbjct: 385 ACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVS 444
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQR---NGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
W ++ G G +A ++ MQ+ G+ P+ TL +++ CA LA+ G + HG
Sbjct: 445 WNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHG 504
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
++ L + + V +ALV Y KCG + S +F+ + R+ ++W L+ Y G E
Sbjct: 505 YAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGE 564
Query: 360 TIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
LF++M + G +P+EVT + L+ACS +G+V++G F M +++G+ P D C+
Sbjct: 565 ATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACV 624
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAI-GWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
+DIL RAGRL+EA + + M + W+T+L +CR+H NV +G+ A E LLEL+P
Sbjct: 625 VDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEE 684
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
+ YVLL +IY++ G+W +++R MR +GV K+PGCSWI+ +H F A + + P S
Sbjct: 685 ASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPAS 744
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
++++A +E L +M+ GY PD S VLHD++ +K +L HSEKLAIAFGLL PG
Sbjct: 745 EEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGAT 804
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
IRV KNLRVC+DCH A K++SK+ REI++RD RFH F+NG+CSCGD+W
Sbjct: 805 IRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 147/534 (27%), Positives = 244/534 (45%), Gaps = 64/534 (11%)
Query: 4 HDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMS---SSRRCVDL 60
HD VS+N LIS + A+ ML G S S + +S ++ V L
Sbjct: 125 HDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRL 184
Query: 61 GRQIHGHILKFGF--GSYVFVGSPLVDMYAKLGLIYDAKRGF-DELPEK-NIVMYNTMIT 116
GR+ H LK G G F + L+ MYA+LGL+ DA+R F P + ++V +NTM++
Sbjct: 185 GREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVS 244
Query: 117 GLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
L+ Q+G+ EA+ +M G+ D T
Sbjct: 245 VLV-------------------------------QSGMFDEAVQTLYDMVALGVRPDGVT 273
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
F S L AC L L+ G+++HA++I++D N FV SALVDMY + + A VF +
Sbjct: 274 FASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMV 333
Query: 236 --AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQ-RNGIEPDDFTLGSVISSCANLASLE 292
+ K + W AM+ GY Q G EEA+++F M+ G P + T+ SV+ +CA +
Sbjct: 334 PDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFA 393
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
HG + G+ V NAL+ Y + G + + R+F +++ D VSW L++G
Sbjct: 394 GKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCV 453
Query: 353 KFGKANETIDL---FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
G + L +++ G+ P+ +TL+ +L C+ +G+ + Y +R
Sbjct: 454 VQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKE-----IHGYAVR 508
Query: 410 PIHDH----YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG-----NV 460
D + ++D+ ++ G L +++ +++P + I W L+ + +HG V
Sbjct: 509 HALDTDVAVGSALVDMYAKCGCLALSRAVFDRLP-RRNTITWNVLIMAYGMHGLGGEATV 567
Query: 461 EIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTM-REKGVRKDP 513
+ A E P N +++ + + G D QL M R+ GV P
Sbjct: 568 LFDRMTASG--EARP-NEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTP 618
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 274 DDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFIT--VSNALVTFYGKCGNIEDSHR 331
D L I S A L H +L GL+ + V+NAL+T Y +CG + +
Sbjct: 56 DHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALE 115
Query: 332 LFNEMN--VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR- 388
+F ++ D VS+ +L+S F + + + ML+ G TL+ VL A S
Sbjct: 116 VFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHL 175
Query: 389 ---AGLVEKGRHYFEIMVKEYGIRPIHDH----YTCMIDILSRAGRLEEAKS-FINKMPF 440
A V GR +K G+ +H H + ++ + +R G + +A+ F P
Sbjct: 176 PAAAAAVRLGREAHAFALKN-GL--LHGHQRFAFNALLSMYARLGLVADAQRLFAGATPG 232
Query: 441 PPDAIGWATLLS 452
D + W T++S
Sbjct: 233 RGDVVTWNTMVS 244
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/644 (35%), Positives = 367/644 (56%), Gaps = 33/644 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V W ++S + +G D++K+ + M G + TF T L S D + +
Sbjct: 211 DIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMP-NNYTFDTALKASIGLGAFDFAKGV 269
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG ILK + VG L+ +Y +LG + DA + F+E+P+ ++V ++ MI +
Sbjct: 270 HGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQ---- 325
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
NG EA+DLF MR + ++FT S+L C
Sbjct: 326 ---------------------------NGFCNEAVDLFIRMREAFVVPNEFTLSSILNGC 358
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G+Q+H +++ +++V +AL+D+Y KC+ + A +F ++ KN VSW
Sbjct: 359 AIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWN 418
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++VGY G +A +F RN + + T S + +CA+LAS++ G Q HG ++ T
Sbjct: 419 TVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKT 478
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
+ VSN+L+ Y KCG+I+ + +FNEM D SW AL+SGY+ G + + +
Sbjct: 479 NNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRIL 538
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+ M KP+ +T +GVLS CS AGL+++G+ FE M++++GI P +HYTCM+ +L R
Sbjct: 539 DIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGR 598
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
+G+L++A I +P+ P + W +LS+ N E + +AE +L+++P + A+YVL+
Sbjct: 599 SGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLV 658
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S++YA +W +V+ +R++M+E GV+K+PG SWI+++ VH FS P I L
Sbjct: 659 SNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGML 718
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP-IRVVKN 603
E LN K + GYVPD ++VL D++ EK K L HSE+LA+A+GL+ +P I ++KN
Sbjct: 719 EWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKN 778
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LR+CSDCH+A K IS I QR++++RD RFH F G CSCGD W
Sbjct: 779 LRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 217/458 (47%), Gaps = 38/458 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VS+ L G+A D + +Y+ + ++G L+ F++ L + S ++
Sbjct: 110 MPERNNVSFVTLAQGYACQ----DPIGLYSRLHREG-HELNPHVFTSFLKLFVSLDKAEI 164
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+H I+K G+ S FVG+ L++ Y+ G + A+ F+ + K+IV++ +++ +
Sbjct: 165 CPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVE 224
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G E+S +L MR+ G + +TF +
Sbjct: 225 NGYFEDSLKLLSC-------------------------------MRMAGFMPNNYTFDTA 253
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A GL A + K +H I++ + + VG L+ +Y + + A VF M +V
Sbjct: 254 LKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDV 313
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V W+ M+ + QNG EAV +F M+ + P++FTL S+++ CA G Q HG
Sbjct: 314 VPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGL 373
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ G I VSNAL+ Y KC ++ + +LF E++ ++EVSW ++ GY G+ +
Sbjct: 374 VVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKA 433
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+F + L + + EVT L AC+ ++ G + +K + + + +ID
Sbjct: 434 FSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNS-LID 492
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ ++ G ++ A+S N+M D W L+S HG
Sbjct: 493 MYAKCGDIKFAQSVFNEME-TIDVASWNALISGYSTHG 529
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 175/361 (48%), Gaps = 36/361 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP +D V W+ +I+ +G N+AV ++ + +++ + T S++L + +C L
Sbjct: 308 MPKNDVVPWSFMIARFCQNGFCNEAVDLF-IRMREAFVVPNEFTLSSILNGCAIGKCSGL 366
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+HG ++K GF ++V + L+D+YAK + A + F EL KN
Sbjct: 367 GEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKN------------- 413
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+SW T+I G G +A +FRE +++ + TF S
Sbjct: 414 ------------------EVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSA 455
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L +++ G Q+H I+ ++ V V ++L+DMY KC IK+A+SVF M +V
Sbjct: 456 LGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDV 515
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
SW A++ GY +G +A++I M+ +P+ T V+S C+N +++G + F
Sbjct: 516 ASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFES 575
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKAN 358
G+ + +V G+ G ++ + +L + V W A++S A + N
Sbjct: 576 MIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLS--ASMNQNN 633
Query: 359 E 359
E
Sbjct: 634 E 634
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 182/402 (45%), Gaps = 42/402 (10%)
Query: 55 RRCVDL-----GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIV 109
RRC+ + IH ILK G +F + L++ Y K G DA FDE+PE+N V
Sbjct: 57 RRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNV 116
Query: 110 MYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG 169
+ T+ G ++ I L+ + EG
Sbjct: 117 SFVTLAQGYAC-----------------------------------QDPIGLYSRLHREG 141
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
++ F S L L E +H+ I++ + N FVG+AL++ Y C S+ A
Sbjct: 142 HELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSAR 201
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
+VF + K++V W ++ Y +NG E+++K+ M+ G P+++T + + + L
Sbjct: 202 TVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLG 261
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
+ + HG+ L T + V L+ Y + G++ D+ ++FNEM D V W+ +++
Sbjct: 262 AFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIA 321
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
+ + G NE +DLF +M + P+E TL +L+ C+ G ++VK
Sbjct: 322 RFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDL 381
Query: 410 PIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
I+ +ID+ ++ +++ A ++ + + W T++
Sbjct: 382 DIYVS-NALIDVYAKCEKMDTAVKLFAELS-SKNEVSWNTVI 421
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 122/283 (43%), Gaps = 10/283 (3%)
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
+D +G++L C K IH I++ ++F + L++ Y K K A ++
Sbjct: 47 LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASL 291
F M +N VS+ + GY ++ + ++ + R G E + S + +L
Sbjct: 107 FDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKA 162
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
E H + G S V AL+ Y CG+++ + +F + +D V W +VS Y
Sbjct: 163 EICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCY 222
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVE--KGRHYFEIMVKEYGIR 409
+ G +++ L M G P+ T L A G + KG H +I+ Y +
Sbjct: 223 VENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHG-QILKTCYVLD 281
Query: 410 PIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
P ++ + ++ G + +A N+MP D + W+ +++
Sbjct: 282 PRVG--VGLLQLYTQLGDMSDAFKVFNEMP-KNDVVPWSFMIA 321
>gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
gi|414878626|tpg|DAA55757.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 776
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/661 (35%), Positives = 378/661 (57%), Gaps = 69/661 (10%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCV------ 58
D VSWN L+SG+ G+ + ++V++LM + GLG +++ + S + C
Sbjct: 167 DDVSWNALLSGYVRAGAREETLEVFSLMCRHGLG------WNSFALGSIIKCCASSSSYA 220
Query: 59 ---DLG-----RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVM 110
D+G +HG ++K G + +F+ S ++DMYAK
Sbjct: 221 AAGDVGGGRIAEAVHGCVVKAGLDADLFLASAMIDMYAK--------------------- 259
Query: 111 YNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQN---GLEREAIDLFREMRL 167
RG + + LF+ + D + I MI G + + REA+ L+ E++
Sbjct: 260 ----------RGALTNAVALFKSVPDPNVIVLNAMIAGFCREEAADVAREALGLYSELQS 309
Query: 168 EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY 227
G+ +F+F S+L AC GKQIH ++++ + +V++GSAL+D+Y ++
Sbjct: 310 RGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDVYIGSALIDLYSGSGCMED 369
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN 287
FR++ ++VV WT+++ G QN EEA+++F R G+ PD F + SV+++CA+
Sbjct: 370 GYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQESVRCGLRPDVFAMSSVMNACAS 429
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
LA G Q ++ +G F + N+ + + G+++ + R F EM RD VSW+A+
Sbjct: 430 LAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSGDVDAATRRFQEMESRDVVSWSAV 489
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKP-DEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY 406
+S +A G A + + +F +ML + P +E+T + +L+ACS GLV++G Y+ IM EY
Sbjct: 490 ISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSILTACSHGGLVDEGLRYYGIMNDEY 549
Query: 407 GIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWA 466
G+ P H TC++D+L RAGRL +A++FI F DA+ W +LL+SCRIHG++E G+
Sbjct: 550 GLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLV 609
Query: 467 AESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHI 526
A+ +++L+P + ASYV+L ++Y G+ S+ R M+E+GV+K+PG SWI+ S VH
Sbjct: 610 ADKIMDLEPTSSASYVILYNMYLDAGELSSASKTRDLMKERGVKKEPGLSWIELSSGVHS 669
Query: 527 FSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIA 586
F A D S P S IY ++ ++ K V +SS D + HSEKLA+A
Sbjct: 670 FVAGDKSHPESKAIYRKVAEMVSK------VAGISSREQD--------LAGCHSEKLAVA 715
Query: 587 FGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDF 646
FG++ +P PIRV+KNLRVC DCH+ + ISK +REI++RDA+RFH F++G CSCG +
Sbjct: 716 FGMIHLPQSAPIRVMKNLRVCRDCHSTMELISKSERREIILRDAIRFHRFRDGSCSCGGY 775
Query: 647 W 647
W
Sbjct: 776 W 776
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/505 (23%), Positives = 228/505 (45%), Gaps = 54/505 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VS+NL+I ++ G ++ + + + R T++ L S V
Sbjct: 62 MPRRNAVSYNLVIVAYSRAGLPALSLATFA-RARAWARVVDRFTYAAALAACSRALDVRT 120
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +H ++ G G+ +F+ + + MYA+ G + +A+R FD E++ V +N +++G +R
Sbjct: 121 GKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGYVR 180
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G EE+ +++F M GL + F GS+
Sbjct: 181 AGAREET-------------------------------LEVFSLMCRHGLGWNSFALGSI 209
Query: 181 LTAC-------------GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY 227
+ C GG +A + +H +++ ++F+ SA++DMY K ++
Sbjct: 210 IKCCASSSSYAAAGDVGGGRIA----EAVHGCVVKAGLDADLFLASAMIDMYAKRGALTN 265
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSE---EAVKIFCNMQRNGIEPDDFTLGSVISS 284
A ++F+++ NV+ AM+ G+ + ++ EA+ ++ +Q G++P +F+ S++ +
Sbjct: 266 AVALFKSVPDPNVIVLNAMIAGFCREEAADVAREALGLYSELQSRGMQPSEFSFSSILRA 325
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
C G Q HG+ L + + +AL+ Y G +ED +R F + +D V W
Sbjct: 326 CNLAGEFGFGKQIHGQVLKHSFQGDVYIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIW 385
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
T+++SG + E + LF++ + GL+PD + V++AC+ + G + VK
Sbjct: 386 TSVISGCVQNELFEEALRLFQESVRCGLRPDVFAMSSVMNACASLAVARTGEQIQCLAVK 445
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
G I + +R+G ++ A +M D + W+ ++SS HG
Sbjct: 446 S-GFNRFTAMGNSFIHMCARSGDVDAATRRFQEME-SRDVVSWSAVISSHAHHGCARDAL 503
Query: 465 WAAESLLELDPYNPASYVLLSSIYA 489
+L+ P LS + A
Sbjct: 504 CVFNEMLDAKVAPPNEITFLSILTA 528
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 177/365 (48%), Gaps = 16/365 (4%)
Query: 104 PEKNIVMYNTMITGLLRRGLVE--ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDL 161
P ++ + N ++ R G+ + RL M ++++S+ +I + GL ++
Sbjct: 30 PNASLFLRNCLLASYCRLGVGAPLHAARLLDEMPRRNAVSYNLVIVAYSRAGLPALSLAT 89
Query: 162 FREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK 221
F R +D+FT+ + L AC L + GK +HA ++ + +F+ +++ MY +
Sbjct: 90 FARARAWARVVDRFTYAAALAACSRALDVRTGKAVHAMVVLGGLGNGLFLSNSVASMYAR 149
Query: 222 CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
C + A VF ++ VSW A+L GY + G EE +++F M R+G+ + F LGS+
Sbjct: 150 CGEMGEARRVFDAAEERDDVSWNALLSGYVRAGAREETLEVFSLMCRHGLGWNSFALGSI 209
Query: 282 ISSC---------ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRL 332
I C ++ HG + GL + + +++A++ Y K G + ++ L
Sbjct: 210 IKCCASSSSYAAAGDVGGGRIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVAL 269
Query: 333 FNEMNVRDEVSWTALVSGYAKFGKAN---ETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
F + + + A+++G+ + A+ E + L+ ++ S G++P E + +L AC+ A
Sbjct: 270 FKSVPDPNVIVLNAMIAGFCREEAADVAREALGLYSELQSRGMQPSEFSFSSILRACNLA 329
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
G G+ ++K ++ + +ID+ S +G +E+ +P D + W +
Sbjct: 330 GEFGFGKQIHGQVLKHSFQGDVYIG-SALIDLYSGSGCMEDGYRCFRSLP-KQDVVIWTS 387
Query: 450 LLSSC 454
++S C
Sbjct: 388 VISGC 392
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 131/277 (47%), Gaps = 10/277 (3%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK--CKSIKYAESVFRTMAWKNVVSWTAM 246
AL +HA + R ++F+ + L+ YC+ + +A + M +N VS+ +
Sbjct: 14 ALPHVAAVHAHLARAHPNASLFLRNCLLASYCRLGVGAPLHAARLLDEMPRRNAVSYNLV 73
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+V Y + G ++ F + D FT + +++C+ + G H ++ GL
Sbjct: 74 IVAYSRAGLPALSLATFARARAWARVVDRFTYAAALAACSRALDVRTGKAVHAMVVLGGL 133
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ + +SN++ + Y +CG + ++ R+F+ RD+VSW AL+SGY + G ET+++F
Sbjct: 134 GNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGYVRAGAREETLEVFSL 193
Query: 367 MLSHGLKPDEVTLIGVLSAC------SRAGLVEKGRHYFEI--MVKEYGIRPIHDHYTCM 418
M HGL + L ++ C + AG V GR + V + G+ + M
Sbjct: 194 MCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVHGCVVKAGLDADLFLASAM 253
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCR 455
ID+ ++ G L A + +P P + A + CR
Sbjct: 254 IDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCR 290
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 112/255 (43%), Gaps = 43/255 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D V W +ISG + +A++++ ++ GL S+++ +S
Sbjct: 377 LPKQDVVIWTSVISGCVQNELFEEALRLFQESVRCGL-RPDVFAMSSVMNACASLAVART 435
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G QI +K GF + +G+ + M A+ G + A R F E+ +++V
Sbjct: 436 GEQIQCLAVKSGFNRFTAMGNSFIHMCARSGDVDAATRRFQEMESRDVV----------- 484
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLA-MDQFTFGS 179
SW+ +I+ +G R+A+ +F EM +A ++ TF S
Sbjct: 485 --------------------SWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLS 524
Query: 180 VLTAC--GGLLALEEGKQIHAFIIRNDH---KDNVFVGSALVDMYCKCKSIKYAESVFRT 234
+LTAC GGL ++EG + + I ND + + +VD+ + + AE+ R
Sbjct: 525 ILTACSHGGL--VDEGLRYYG--IMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRD 580
Query: 235 MAW-KNVVSWTAMLV 248
A+ + V W ++L
Sbjct: 581 SAFHDDAVVWRSLLA 595
>gi|356525712|ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 691
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/613 (37%), Positives = 356/613 (58%), Gaps = 33/613 (5%)
Query: 35 DGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIY 94
DG G + T+ ++ R + +++ +++ GF ++V + ++ M+ K GL+
Sbjct: 112 DGYG-VGASTYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMHVKCGLML 170
Query: 95 DAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGL 154
DA++ FDE+PEK++ + TM+ GL+ G E+ RLF M W +G
Sbjct: 171 DARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCM-------WKE-----FNDGR 218
Query: 155 EREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSA 214
R TF +++ A GL ++ GKQIH+ ++ D+ FV A
Sbjct: 219 SR-------------------TFATMIRASAGLGLVQVGKQIHSCALKRGVGDDHFVSCA 259
Query: 215 LVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD 274
L+DMY KC SI+ A VF M K V W +++ Y +G SEEA+ ++ M+ +G D
Sbjct: 260 LIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVD 319
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN 334
FT+ VI CA LASLE Q H + G + I + ALV FY K G +ED+ +FN
Sbjct: 320 HFTISIVIRICARLASLEHAKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFN 379
Query: 335 EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEK 394
M ++ +SW AL++GY G+ E +++FE+ML G+ P VT + VLSACS +GL ++
Sbjct: 380 RMRHKNVISWNALIAGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQR 439
Query: 395 GRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
G F M +++ ++P HY CMI++L R L+EA + I PF P A WA LL++C
Sbjct: 440 GWEIFYSMKRDHKVKPRAMHYACMIELLGRESLLDEAYALIRTAPFKPTANMWAALLTAC 499
Query: 455 RIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPG 514
R+H N+E+GK AAE L ++P +Y++L ++Y S GK + + +T+++KG+R P
Sbjct: 500 RMHKNLELGKLAAEKLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGILQTLKKKGLRMLPA 559
Query: 515 CSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIK 574
CSW++ K + + F D S + +IY +++ L ++ K GY + ++L DV+ E+ +
Sbjct: 560 CSWVEVKKQPYAFLCGDKSHSQTKEIYQKVDNLMVEICKHGYAEENETLLPDVDEEEQ-R 618
Query: 575 MLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFH 634
+L +HSEKLAIAFGL+ P P+++ + RVC DCH+A K I+ +T REI+VRDA RFH
Sbjct: 619 ILKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHSAIKLIAMVTGREIVVRDASRFH 678
Query: 635 LFKNGECSCGDFW 647
F+NG CSCGD+W
Sbjct: 679 HFRNGSCSCGDYW 691
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 145/286 (50%), Gaps = 32/286 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SW ++ G G+ ++A +++ M K+ SR TF+TM+ S+ V +
Sbjct: 179 MPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSR-TFATMIRASAGLGLVQV 237
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIH LK G G FV L+DMY+K G I DA FD++PEK V +N++I
Sbjct: 238 GKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYAL 297
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G E EA+ L+ EMR G +D FT V
Sbjct: 298 HGYSE-------------------------------EALSLYFEMRDSGTTVDHFTISIV 326
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ C L +LE KQ HA ++R+ ++ +ALVD Y K ++ A VF M KNV
Sbjct: 327 IRICARLASLEHAKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNV 386
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCA 286
+SW A++ GYG +G +EAV++F M + G+ P T +V+S+C+
Sbjct: 387 ISWNALIAGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACS 432
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 183/372 (49%), Gaps = 11/372 (2%)
Query: 144 TMITGLMQNGLEREAIDLFREMRLE--GLAMDQFTFGSVLTACGGLLALEEGKQIHAFII 201
+ I L+ REA++LF + LE G + T+ ++++AC GL ++ K++ ++I
Sbjct: 86 SQIEKLVVCNRHREAMELFEILELEHDGYGVGASTYDALVSACVGLRSIRGVKRVFNYMI 145
Query: 202 RNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVK 261
+ + +++V + ++ M+ KC + A +F M K+V SW M+ G G EA +
Sbjct: 146 NSGFEPDLYVMNRVLFMHVKCGLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFR 205
Query: 262 IFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYG 321
+F M + + T ++I + A L ++ G Q H +L G+ VS AL+ Y
Sbjct: 206 LFLCMWKEFNDGRSRTFATMIRASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYS 265
Query: 322 KCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIG 381
KCG+IED+H +F++M + V W ++++ YA G + E + L+ +M G D T+
Sbjct: 266 KCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISI 325
Query: 382 VLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFP 441
V+ C+R +E + +V+ +G T ++D S+ GR+E+A+ N+M
Sbjct: 326 VIRICARLASLEHAKQAHAALVR-HGFATDIVANTALVDFYSKWGRMEDARHVFNRMRH- 383
Query: 442 PDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYA------SKGKWD 495
+ I W L++ HG + E +L+ + P L+ + A S+ W+
Sbjct: 384 KNVISWNALIAGYGNHGQGQEAVEMFEQMLQ-EGVTPTHVTFLAVLSACSYSGLSQRGWE 442
Query: 496 HVSQLRRTMREK 507
++R + K
Sbjct: 443 IFYSMKRDHKVK 454
>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
Length = 854
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/650 (36%), Positives = 366/650 (56%), Gaps = 37/650 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+WN ++S G ++AV+ M+ G+ +TF++ L S +D+GR++
Sbjct: 235 DVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGV-RPDGVTFASALPACSRLELLDVGREM 293
Query: 65 HGHILKFG-FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
H +++K + FV S LVDMYA + A++ FD +P+ +
Sbjct: 294 HAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQL------------- 340
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQFTFGSVLT 182
GM W MI G Q G++ EA+ LF M E G + T SVL
Sbjct: 341 ---------GM-------WNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLP 384
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
AC A + +H ++++ N FV +AL+DMY + A +F + +VVS
Sbjct: 385 ACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVS 444
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQR---NGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
W ++ G G +A ++ MQ+ G+ P+ TL +++ CA LA+ G + HG
Sbjct: 445 WNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHG 504
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
++ L + + V +ALV Y KCG + S +F+ + R+ ++W L+ Y G E
Sbjct: 505 YAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGE 564
Query: 360 TIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
LF++M + G +P+EVT + L+ACS +G+V++G F M +++G+ P D C+
Sbjct: 565 ATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACV 624
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAI-GWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
+DIL RAGRL+EA + + M + W+T+L +CR+H NV +G+ A E LLEL+P
Sbjct: 625 VDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEE 684
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
+ YVLL +IY++ G+W +++R MR +GV K+PGCSWI+ +H F A + + P S
Sbjct: 685 ASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPAS 744
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
++++A +E L +M+ GY PD S VLHD++ +K +L HSEKLAIAFGLL PG
Sbjct: 745 EEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGAT 804
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
IRV KNLRVC+DCH A K++SK+ REI++RD RFH F+NG+CSCGD+W
Sbjct: 805 IRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 147/534 (27%), Positives = 244/534 (45%), Gaps = 64/534 (11%)
Query: 4 HDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMS---SSRRCVDL 60
HD VS+N LIS + A+ ML G S S + +S ++ V L
Sbjct: 125 HDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRL 184
Query: 61 GRQIHGHILKFGF--GSYVFVGSPLVDMYAKLGLIYDAKRGF-DELPEK-NIVMYNTMIT 116
GR+ H LK G G F + L+ MYA+LGL+ DA+R F P + ++V +NTM++
Sbjct: 185 GREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVS 244
Query: 117 GLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
L+ Q+G+ EA+ +M G+ D T
Sbjct: 245 VLV-------------------------------QSGMFDEAVQTLYDMVALGVRPDGVT 273
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
F S L AC L L+ G+++HA++I++D N FV SALVDMY + + A VF +
Sbjct: 274 FASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMV 333
Query: 236 --AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQ-RNGIEPDDFTLGSVISSCANLASLE 292
+ K + W AM+ GY Q G EEA+++F M+ G P + T+ SV+ +CA +
Sbjct: 334 PDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFA 393
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
HG + G+ V NAL+ Y + G + + R+F +++ D VSW L++G
Sbjct: 394 GKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCV 453
Query: 353 KFGKANETIDL---FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
G + L +++ G+ P+ +TL+ +L C+ +G+ + Y +R
Sbjct: 454 VQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKE-----IHGYAVR 508
Query: 410 PIHDH----YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG-----NV 460
D + ++D+ ++ G L +++ +++P + I W L+ + +HG V
Sbjct: 509 HALDTDVAVGSALVDMYAKCGCLALSRAVFDRLP-RRNTITWNVLIMAYGMHGLGGEATV 567
Query: 461 EIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTM-REKGVRKDP 513
+ A E P N +++ + + G D QL M R+ GV P
Sbjct: 568 LFDRMTASG--EARP-NEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTP 618
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 274 DDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFIT--VSNALVTFYGKCGNIEDSHR 331
D L I S A L H +L GL+ + V+NAL+T Y +CG + +
Sbjct: 56 DHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALE 115
Query: 332 LFNEMN--VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR- 388
+F ++ D VS+ +L+S F + + + ML+ G TL+ VL A S
Sbjct: 116 VFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHL 175
Query: 389 ---AGLVEKGRHYFEIMVKEYGIRPIHDH----YTCMIDILSRAGRLEEAKS-FINKMPF 440
A V GR +K G+ +H H + ++ + +R G + +A+ F P
Sbjct: 176 PAAAAAVRLGREAHAFALKN-GL--LHGHQRFAFNALLSMYARLGLVADAQRLFAGATPG 232
Query: 441 PPDAIGWATLLS 452
D + W T++S
Sbjct: 233 RGDVVTWNTMVS 244
>gi|302795364|ref|XP_002979445.1| hypothetical protein SELMODRAFT_110780 [Selaginella moellendorffii]
gi|300152693|gb|EFJ19334.1| hypothetical protein SELMODRAFT_110780 [Selaginella moellendorffii]
Length = 637
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/609 (36%), Positives = 343/609 (56%), Gaps = 35/609 (5%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
T++++L +S R +DLG+ +H I + F Y F+G+ L+ MY G + AK+ FD +
Sbjct: 59 TYASLLRQCASARALDLGQLLHEEIARRRFDGYTFLGNTLITMYGSCGDVDRAKKAFDRI 118
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
+N +++SW +MI G QN +EA+ LF+
Sbjct: 119 DSRN------------------------------NTVSWNSMIAGYAQNAFSKEALKLFK 148
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
M L+G ++ TF S L A G L AL EG IH ++ +D + + V +AL++ + KC
Sbjct: 149 AMDLQGFQPNKVTFVSALDAAGNLGALPEGSAIHEEVLEHDCETDTAVATALINFFGKCP 208
Query: 224 SIK-----YAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
+ +++F M ++ VSW+ ++ Y Q+ ++++F M G +P FT
Sbjct: 209 YCQSGDPHQVQAIFDRMRDRDDVSWSTLVGAYAQSNQHRTSMELFKKMDVEGYKPTRFTF 268
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
SV+ +C L++L EG H + + L + + N +V +G+CG++E+S F EM
Sbjct: 269 MSVVDACGKLSALREGRVLHSSIMNSALKWDVVLQNGIVNMFGRCGSVEESSSAFQEMLQ 328
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
RD VSW+ ++S +A G E ++ F M G PDE+T + +LS C+ AGL+ R +
Sbjct: 329 RDAVSWSIMISAFAHNGHGAEALETFLAMNLDGQTPDELTFVSILSVCAHAGLLRDARGH 388
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
MV +Y + P DHY C++D+L R+GRL A+ + MP+ P W TLL++C++ G
Sbjct: 389 LVDMVGDYALVPGLDHYVCLVDLLCRSGRLGAAEELVETMPYEPHGSAWLTLLAACKMQG 448
Query: 459 NVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWI 518
+++ G +S L DP A Y LLSSIYA + + + +R+ M E+G++K GCS+I
Sbjct: 449 DLKRGARVGKSFLATDPDTSAPYALLSSIYAEAKRVNEMRIVRKAMEERGIKKQAGCSYI 508
Query: 519 KYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNH 578
+ RVH F A + S P I EL ++ RKM++ G V D V +D+E EK +L +
Sbjct: 509 EVHDRVHEFKAGEVSHPRHRDILYELMQIQRKMVEAGCVRDTRLVSYDLEEEEKENLLTY 568
Query: 579 HSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKN 638
HSEKLAI GL+ PG +RVVKNLRVCSDCH A K+IS+I R I+VRD RFH F++
Sbjct: 569 HSEKLAIGLGLVTTRPGTELRVVKNLRVCSDCHTAIKFISRICGRRIVVRDCNRFHHFED 628
Query: 639 GECSCGDFW 647
G CSC D+W
Sbjct: 629 GVCSCNDYW 637
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 164/330 (49%), Gaps = 15/330 (4%)
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
D T+ S+L C AL+ G+ +H I R F+G+ L+ MY C + A+ F
Sbjct: 56 DLETYASLLRQCASARALDLGQLLHEEIARRRFDGYTFLGNTLITMYGSCGDVDRAKKAF 115
Query: 233 -RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASL 291
R + N VSW +M+ GY QN S+EA+K+F M G +P+ T S + + NL +L
Sbjct: 116 DRIDSRNNTVSWNSMIAGYAQNAFSKEALKLFKAMDLQGFQPNKVTFVSALDAAGNLGAL 175
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKC-----GNIEDSHRLFNEMNVRDEVSWTA 346
EG+ H L + V+ AL+ F+GKC G+ +F+ M RD+VSW+
Sbjct: 176 PEGSAIHEEVLEHDCETDTAVATALINFFGKCPYCQSGDPHQVQAIFDRMRDRDDVSWST 235
Query: 347 LVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY 406
LV YA+ + +++LF+KM G KP T + V+ AC + + +GR +
Sbjct: 236 LVGAYAQSNQHRTSMELFKKMDVEGYKPTRFTFMSVVDACGKLSALREGR-VLHSSIMNS 294
Query: 407 GIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWA 466
++ ++++ R G +EE+ S +M DA+ W+ ++S+ +G+ G A
Sbjct: 295 ALKWDVVLQNGIVNMFGRCGSVEESSSAFQEM-LQRDAVSWSIMISAFAHNGH---GAEA 350
Query: 467 AESLL--ELDPYNP--ASYVLLSSIYASKG 492
E+ L LD P ++V + S+ A G
Sbjct: 351 LETFLAMNLDGQTPDELTFVSILSVCAHAG 380
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 167/330 (50%), Gaps = 33/330 (10%)
Query: 4 HDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQ 63
++ VSWN +I+G+A + +A+K++ M G +++TF + L + + + G
Sbjct: 122 NNTVSWNSMIAGYAQNAFSKEALKLFKAMDLQGF-QPNKVTFVSALDAAGNLGALPEGSA 180
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
IH +L+ + V + L++ + K + G
Sbjct: 181 IHEEVLEHDCETDTAVATALINFFGK--------------------------CPYCQSGD 214
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
+ + +F M+D+D +SW+T++ Q+ R +++LF++M +EG +FTF SV+ A
Sbjct: 215 PHQVQAIFDRMRDRDDVSWSTLVGAYAQSNQHRTSMELFKKMDVEGYKPTRFTFMSVVDA 274
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
CG L AL EG+ +H+ I+ + K +V + + +V+M+ +C S++ + S F+ M ++ VSW
Sbjct: 275 CGKLSALREGRVLHSSIMNSALKWDVVLQNGIVNMFGRCGSVEESSSAFQEMLQRDAVSW 334
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-----TQFH 298
+ M+ + NG EA++ F M +G PD+ T S++S CA+ L +
Sbjct: 335 SIMISAFAHNGHGAEALETFLAMNLDGQTPDELTFVSILSVCAHAGLLRDARGHLVDMVG 394
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIED 328
+LV GL ++ + + L+ G+ G E+
Sbjct: 395 DYALVPGLDHYVCLVD-LLCRSGRLGAAEE 423
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 112/253 (44%), Gaps = 28/253 (11%)
Query: 272 EPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHR 331
+PD T S++ CA+ +L+ G H + + N L+T YG CG+++ + +
Sbjct: 54 KPDLETYASLLRQCASARALDLGQLLHEEIARRRFDGYTFLGNTLITMYGSCGDVDRAKK 113
Query: 332 LFNEMNVRDE-VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
F+ ++ R+ VSW ++++GYA+ + E + LF+ M G +P++VT + L A G
Sbjct: 114 AFDRIDSRNNTVSWNSMIAGYAQNAFSKEALKLFKAMDLQGFQPNKVTFVSALDAAGNLG 173
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR-----AGRLEEAKSFINKMPFPPDAI 445
+ +G E V E+ T +I+ + +G + ++ ++M D +
Sbjct: 174 ALPEGSAIHE-EVLEHDCETDTAVATALINFFGKCPYCQSGDPHQVQAIFDRMR-DRDDV 231
Query: 446 GWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY-------------------VLLSS 486
W+TL+ + N ++++ Y P + VL SS
Sbjct: 232 SWSTLVGA-YAQSNQHRTSMELFKKMDVEGYKPTRFTFMSVVDACGKLSALREGRVLHSS 290
Query: 487 IYASKGKWDHVSQ 499
I S KWD V Q
Sbjct: 291 IMNSALKWDVVLQ 303
>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
Length = 856
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/650 (36%), Positives = 366/650 (56%), Gaps = 37/650 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+WN ++S G ++AV+ M+ G+ +TF++ L S +D+GR++
Sbjct: 237 DVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGV-RPDGVTFASALPACSRLELLDVGREM 295
Query: 65 HGHILKFG-FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
H +++K + FV S LVDMYA + A++ FD +P+ +
Sbjct: 296 HAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQL------------- 342
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQFTFGSVLT 182
GM W MI G Q G++ EA+ LF M E G + T SVL
Sbjct: 343 ---------GM-------WNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLP 386
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
AC A + +H ++++ N FV +AL+DMY + A +F + +VVS
Sbjct: 387 ACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVS 446
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQR---NGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
W ++ G G +A ++ MQ+ G+ P+ TL +++ CA LA+ G + HG
Sbjct: 447 WNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHG 506
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
++ L + + V +ALV Y KCG + S +F+ + R+ ++W L+ Y G E
Sbjct: 507 YAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGE 566
Query: 360 TIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
LF++M + G +P+EVT + L+ACS +G+V++G F M +++G+ P D C+
Sbjct: 567 ATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACV 626
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAI-GWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
+DIL RAGRL+EA + + M + W+T+L +CR+H NV +G+ A E LLEL+P
Sbjct: 627 VDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEE 686
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
+ YVLL +IY++ G+W +++R MR +GV K+PGCSWI+ +H F A + + P S
Sbjct: 687 ASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPAS 746
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
++++A +E L +M+ GY PD S VLHD++ +K +L HSEKLAIAFGLL PG
Sbjct: 747 EEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGAT 806
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
IRV KNLRVC+DCH A K++SK+ REI++RD RFH F+NG+CSCGD+W
Sbjct: 807 IRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 856
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 145/535 (27%), Positives = 243/535 (45%), Gaps = 66/535 (12%)
Query: 4 HDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLI----MSSSRRCVD 59
HD VS+N LIS D + G L+ T ++L + ++ V
Sbjct: 127 HDAVSFNSLISALCLFRRW-DHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVR 185
Query: 60 LGRQIHGHILKFGF--GSYVFVGSPLVDMYAKLGLIYDAKRGF-DELPEK-NIVMYNTMI 115
LGR+ H LK G G F + L+ MYA+LGL+ DA+R F P + ++V +NTM+
Sbjct: 186 LGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMV 245
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
+ L+ Q+G+ EA+ +M G+ D
Sbjct: 246 SVLV-------------------------------QSGMFDEAVQTLYDMVALGVRPDGV 274
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESVFRT 234
TF S L AC L L+ G+++HA++I++D N FV SALVDMY + + A VF
Sbjct: 275 TFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDM 334
Query: 235 M--AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQ-RNGIEPDDFTLGSVISSCANLASL 291
+ + K + W AM+ GY Q G EEA+++F M+ G P + T+ SV+ +CA +
Sbjct: 335 VPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAF 394
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
HG + G+ V NAL+ Y + G + + R+F +++ D VSW L++G
Sbjct: 395 AGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGC 454
Query: 352 AKFGKANETIDL---FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
G + L +++ G+ P+ +TL+ +L C+ +G+ + Y +
Sbjct: 455 VVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKE-----IHGYAV 509
Query: 409 RPIHDH----YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG-----N 459
R D + ++D+ ++ G L +++ +++P + I W L+ + +HG
Sbjct: 510 RHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLP-RRNTITWNVLIMAYGMHGLGGEAT 568
Query: 460 VEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTM-REKGVRKDP 513
V + A E P N +++ + + G D QL M R+ GV P
Sbjct: 569 VLFDRMTASG--EARP-NEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTP 620
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 274 DDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFIT--VSNALVTFYGKCGNIEDSHR 331
D L I S A L H +L GL+ + V+NAL+T Y +CG + +
Sbjct: 58 DHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALE 117
Query: 332 LFNEMN--VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR- 388
+F ++ D VS+ +L+S F + + + ML+ G TL+ VL A S
Sbjct: 118 VFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHL 177
Query: 389 ---AGLVEKGRHYFEIMVKEYGIRPIHDH----YTCMIDILSRAGRLEEAKS-FINKMPF 440
A V GR +K G+ +H H + ++ + +R G + +A+ F P
Sbjct: 178 PAAAAAVRLGREAHAFALKN-GL--LHGHQRFAFNALLSMYARLGLVADAQRLFAGATPG 234
Query: 441 PPDAIGWATLLS 452
D + W T++S
Sbjct: 235 RGDVVTWNTMVS 246
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/652 (34%), Positives = 363/652 (55%), Gaps = 41/652 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRI-----TFSTMLIMSSSR 55
+P WN +I G++ + DA+ +Y+ M L+R+ TF +L S
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNM------QLARVSPDSFTFPHLLKACSGL 132
Query: 56 RCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
+ +GR +H + + GF + VFV + L+ +YAK + A+ F+ LP
Sbjct: 133 SHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLP----------- 181
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
+ ++ +SWT +++ QNG EA+++F MR + D
Sbjct: 182 ------------------LPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWV 223
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
SVL A L L++G+ IHA +++ + + +L MY KC + A+ +F M
Sbjct: 224 ALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKM 283
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
N++ W AM+ GY +NG + EA+ +F M + PD ++ S IS+CA + SLE+
Sbjct: 284 KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQAR 343
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
+ + + +S+AL+ + KCG++E + +F+ RD V W+A++ GY G
Sbjct: 344 SMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHG 403
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
+A E I L+ M G+ P++VT +G+L AC+ +G+V +G +F +M ++ I P HY
Sbjct: 404 RAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMA-DHKINPQQQHY 462
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
C+ID+L RAG L++A I MP P W LLS+C+ H +VE+G++AA+ L +DP
Sbjct: 463 ACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDP 522
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSP 535
N YV LS++YA+ WD V+++R M+EKG+ KD GCSW++ + R+ F D S P
Sbjct: 523 SNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHP 582
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
++I ++E + ++ + G+V + + LHD+ E + L HSE++AIA+GL+ P G
Sbjct: 583 RYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQG 642
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
P+R+ KNLR C +CH ATK ISK+ REI+VRD RFH FK+G CSCGD+W
Sbjct: 643 TPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 202/399 (50%), Gaps = 35/399 (8%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+QIH +L G F+ + L+ + G I A++ FD+LP I
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQI------------- 84
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
W +I G +N ++A+ ++ M+L ++ D FTF +L
Sbjct: 85 ------------------FPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW--KN 239
AC GL L+ G+ +HA + R +VFV + L+ +Y KC+ + A +VF + +
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT 186
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+VSWTA++ Y QNG EA++IF +M++ ++PD L SV+++ L L++G H
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ GL + +L T Y KCG + + LF++M + + W A++SGYAK G A E
Sbjct: 247 SVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYARE 306
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
ID+F +M++ ++PD +++ +SAC++ G +E+ R +E V R + +I
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYE-YVGRSDYRDDVFISSALI 365
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
D+ ++ G +E A+ ++ D + W+ ++ +HG
Sbjct: 366 DMFAKCGSVEGARLVFDRT-LDRDVVVWSAMIVGYGLHG 403
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/542 (38%), Positives = 326/542 (60%)
Query: 106 KNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM 165
+N+ + N ++ + RG +E+++ LF GM + SW+ ++ G + G +FRE+
Sbjct: 83 RNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFREL 142
Query: 166 RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI 225
G +D ++ V+ AC L L+ G+ IH ++ FV + LVDMY +CK +
Sbjct: 143 LRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVV 202
Query: 226 KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
+ A +F M +++ +WT M+ ++G E++ F M+ GI PD L +V+ +C
Sbjct: 203 EDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYAC 262
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
A L ++ + H TG + + A++ Y KCG++E + +F+ M VR+ ++W+
Sbjct: 263 AKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWS 322
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE 405
A+++ Y G+ + ++LF ML G+ P+ +T + +L ACS AGL+E+G+ +F M E
Sbjct: 323 AMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDE 382
Query: 406 YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKW 465
YG+ P HYTCM+D+L RAGRL+EA I MP D + W LL +CRIH ++++ +
Sbjct: 383 YGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGACRIHRHLDLAER 442
Query: 466 AAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVH 525
A SLL+L P YVLLS+IYA+ GKW+ +++ R M + G+RK PG +WI+ +++
Sbjct: 443 VARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLRKIPGRTWIEVGEKLY 502
Query: 526 IFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAI 585
F D + P S++IY L++L K+ GY PD + VL+DV+ K +L HSEKLAI
Sbjct: 503 QFGVGDKTHPRSNEIYKMLKRLGEKLEVAGYHPDTNDVLYDVDEEVKQGLLYSHSEKLAI 562
Query: 586 AFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGD 645
AFGLL +P G PIR+ KNLRVC DCH K++S I Q+ I+VRDA RFH FK G CSC D
Sbjct: 563 AFGLLVLPQGHPIRITKNLRVCGDCHTFCKFVSLIEQKTIIVRDAKRFHHFKEGVCSCRD 622
Query: 646 FW 647
+W
Sbjct: 623 YW 624
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 185/370 (50%), Gaps = 42/370 (11%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL--GRQIH 65
SW++++ G+A G+ ++ +L+ G +S +++ + R DL GR IH
Sbjct: 118 SWSVIVGGYAKVGNFFSCFWMFRELLRSGA---PLDDYSAPVVIRACRDLKDLKCGRLIH 174
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
LK G FV + LVDMYA+ ++ DA + F ++ ++++ + MI L
Sbjct: 175 CITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGAL------- 227
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
++G+ E++ F MR +G+ D+ +V+ AC
Sbjct: 228 ------------------------AESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACA 263
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
L A+ + K IHA+I + +V +G+A++DMY KC S++ A +F M +NV++W+A
Sbjct: 264 KLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSA 323
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL-VT 304
M+ YG +G E+A+++F M R+GI P+ T S++ +C++ +EEG +F
Sbjct: 324 MIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEY 383
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALVSGYAKFGKANETIDL 363
G+ + +V G+ G ++++ + M V +DEV W AL+ + + +DL
Sbjct: 384 GVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGA----CRIHRHLDL 439
Query: 364 FEKMLSHGLK 373
E++ LK
Sbjct: 440 AERVARSLLK 449
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 162/320 (50%), Gaps = 16/320 (5%)
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
L D F S L +C L + +Q+HA I N N+ V + L+ MY + +++ A+
Sbjct: 49 LHYDTKRFRSSLLSCRNLFQV---RQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQ 105
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
+F M+ ++ SW+ ++ GY + G +F + R+G DD++ VI +C +L
Sbjct: 106 ELFDGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLK 165
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
L+ G H +L GL V LV Y +C +ED+H++F +M RD +WT ++
Sbjct: 166 DLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIG 225
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR--HYFEIMVKEYG 407
A+ G E++ F++M + G+ PD+V L+ V+ AC++ G + K + H + I Y
Sbjct: 226 ALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAY-INGTGYS 284
Query: 408 IRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAA 467
+ I T MID+ ++ G +E A+ ++M + I W+ ++++ HG
Sbjct: 285 LDVILG--TAMIDMYAKCGSVESARWIFDRMQV-RNVITWSAMIAAYGYHGQ-------G 334
Query: 468 ESLLELDPYNPASYVLLSSI 487
E LEL P S +L + I
Sbjct: 335 EKALELFPMMLRSGILPNRI 354
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 116/281 (41%), Gaps = 65/281 (23%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +W ++I A G +++ ++ M G+ ++ T++ + ++ + I
Sbjct: 216 DLATWTVMIGALAESGVPVESLVFFDRMRNQGIVP-DKVALVTVVYACAKLGAMNKAKAI 274
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +I G+ V +G+ ++DMYAK G + A+ FD + +N++
Sbjct: 275 HAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVI--------------- 319
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+W+ MI +G +A++LF M G+ ++ TF S+L AC
Sbjct: 320 ----------------TWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYAC 363
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+EEG++ S++ D Y +K+ +T
Sbjct: 364 SHAGLIEEGQRFF---------------SSMWDEYGVTPDVKH---------------YT 393
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
M+ G+ G +EA+++ M +E D+ G+++ +C
Sbjct: 394 CMVDLLGRAGRLDEALEMIEGMP---VEKDEVLWGALLGAC 431
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 66/147 (44%), Gaps = 32/147 (21%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + ++W+ +I+ + HG A++++ +ML+ G+ +RITF ++L S ++
Sbjct: 313 MQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILP-NRITFVSLLYACSHAGLIEE 371
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G++ F S M+ + G+ D K Y M+ L R
Sbjct: 372 GQRF--------FSS----------MWDEYGVTPDVKH------------YTCMVDLLGR 401
Query: 121 RGLVEESRRLFRGMK-DKDSISWTTMI 146
G ++E+ + GM +KD + W ++
Sbjct: 402 AGRLDEALEMIEGMPVEKDEVLWGALL 428
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/544 (40%), Positives = 331/544 (60%), Gaps = 5/544 (0%)
Query: 109 VMYNTMITGLLRRGLVEES----RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
V +NT + E S R LF M + D + + ++ G ++ E +LF E
Sbjct: 62 VSFNTKLINFCTESPTESSMSYARHLFDAMSEPDIVIFNSIARGYSRSTNPLEVFNLFVE 121
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
+ + L D +TF S+L AC ALEEG+Q+H ++ DNV+V L++MY +C+
Sbjct: 122 ILEDDLLPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGVDDNVYVCPTLINMYTECED 181
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A VF + VV + AM+ GY + EA+ +F MQ ++P++ TL SV+SS
Sbjct: 182 VDAARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKNLKPNEITLLSVLSS 241
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
CA L SL+ G H + G ++ V+ AL+ + KCG+++D+ +F M +D +W
Sbjct: 242 CALLGSLDLGKWIHEYAKKHGFCKYVKVNTALIDMFAKCGSLDDAVSIFENMRYKDTQAW 301
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
+A++ YA G+A ++ +FE+M S ++PDE+T +G+L+ACS GLVE+GR YF MV
Sbjct: 302 SAMIVAYANHGQAENSMLMFERMRSENVQPDEITFLGLLNACSHTGLVEEGREYFSWMVH 361
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
E+GI P HY M+D+L RAG LE+A FI+K+P P + W LL++C H N+E+ +
Sbjct: 362 EFGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLELAE 421
Query: 465 WAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRV 524
+E +LELD + YV+LS++YA KW+ V LR+ M+++ K PGCS I+ + V
Sbjct: 422 KVSERILELDDSHGGDYVILSNLYARNKKWEAVDSLRKVMKDRKAVKVPGCSSIEVNNVV 481
Query: 525 HIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLH-DVELSEKIKMLNHHSEKL 583
H F + D + +++ L+++ +++ GYVPD S V+H D+ EK L +HSEKL
Sbjct: 482 HEFFSGDGVKSATTKLHRALDEMVKELKLAGYVPDTSMVVHADMGDQEKEITLRYHSEKL 541
Query: 584 AIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSC 643
AIAFGLL PPG IRVVKNLRVC DCH+A K IS I R++++RD RFH F++G+CSC
Sbjct: 542 AIAFGLLNTPPGTTIRVVKNLRVCRDCHSAAKLISLIFGRKVVLRDVQRFHHFEDGKCSC 601
Query: 644 GDFW 647
DFW
Sbjct: 602 RDFW 605
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 187/374 (50%), Gaps = 38/374 (10%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V +N + G++ + + ++ +L+D L TF ++L + + ++ GRQ+
Sbjct: 95 DIVIFNSIARGYSRSTNPLEVFNLFVEILEDDLLP-DNYTFPSLLKACAVAKALEEGRQL 153
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +K G V+V L++MY + + A+ FD + E +V YN MI
Sbjct: 154 HCLSMKLGVDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAMI--------- 204
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
TG + EA+ LFREM+ + L ++ T SVL++C
Sbjct: 205 ----------------------TGYARRNRPNEALSLFREMQGKNLKPNEITLLSVLSSC 242
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L +L+ GK IH + ++ V V +AL+DM+ KC S+ A S+F M +K+ +W+
Sbjct: 243 ALLGSLDLGKWIHEYAKKHGFCKYVKVNTALIDMFAKCGSLDDAVSIFENMRYKDTQAWS 302
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
AM+V Y +G +E ++ +F M+ ++PD+ T ++++C++ +EEG ++ +
Sbjct: 303 AMIVAYANHGQAENSMLMFERMRSENVQPDEITFLGLLNACSHTGLVEEGREYFSWMVHE 362
Query: 305 -GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD-EVSWTALVSGYAKFGKANETID 362
G++ I ++V G+ G++ED++ +++ + + W L++ + ++ ++
Sbjct: 363 FGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDKLPISPTPMLWRILLAACS----SHNNLE 418
Query: 363 LFEKMLSHGLKPDE 376
L EK+ L+ D+
Sbjct: 419 LAEKVSERILELDD 432
Score = 38.9 bits (89), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + D +W+ +I +A+HG +++ ++ M + + ITF +L S V+
Sbjct: 293 MRYKDTQAWSAMIVAYANHGQAENSMLMFERMRSENV-QPDEITFLGLLNACSHTGLVEE 351
Query: 61 GRQIHGHIL-KFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
GR+ ++ +FG + +VD+ + G + DA D+LP
Sbjct: 352 GREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDKLP 396
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 239/643 (37%), Positives = 351/643 (54%), Gaps = 33/643 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D + WN +I G+ V+ +++Y M + + + TF +L +G+QI
Sbjct: 64 DILLWNAIIKGYTQKNIVDAPIRMYMDMQISQV-HPNCFTFLYVLKACGGTSVEGIGKQI 122
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG K+GFGS VFV + LV MYAK G I
Sbjct: 123 HGQTFKYGFGSNVFVQNSLVSMYAKFGQI------------------------------- 151
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+R +F + D+ +SWT++I+G +QNG EA+++F+EMR + D SV+TA
Sbjct: 152 SYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAY 211
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+ L +GK IH + + + + +L MY K ++ A F M N++ W
Sbjct: 212 TNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWN 271
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
AM+ GY NG EEA+K+F M I D T+ S + + A + SLE G +
Sbjct: 272 AMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKS 331
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
V+ L+ Y KCG+I + +F+ + +D V W+ ++ GY G E I L+
Sbjct: 332 EYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLY 391
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+M G+ P++ T IG+L+AC +GLV++G F +M ++GI P H HY+C++D+L R
Sbjct: 392 NEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLM-PDHGIEPHHQHYSCVVDLLGR 450
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG L +A FI MP P W LLS+C+IH V +G+ AAE L LDPYN YV L
Sbjct: 451 AGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQL 510
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S++YAS W V+ +R M +KG+ KD G S I+ + F D S P S +I+ EL
Sbjct: 511 SNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEEL 570
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
++L +++ GYVP M SVLHD+ E + L HHSE+LA+A+G++ PG +R+ KNL
Sbjct: 571 DRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNL 630
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R C +CH+A K ISK+ REI++RDA RFH FK+G CSCGDFW
Sbjct: 631 RACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 673
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 175/345 (50%), Gaps = 2/345 (0%)
Query: 115 ITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
I L G V + + FR + + D + W +I G Q + I ++ +M++ + +
Sbjct: 41 INACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNC 100
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
FTF VL ACGG GKQIH + NVFV ++LV MY K I YA VF
Sbjct: 101 FTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDK 160
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
+ + VVSWT+++ GY QNG EA+ +F M++ ++PD L SV+++ N+ L +G
Sbjct: 161 LHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQG 220
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
HG GL + +L T Y K G +E + FN M + + W A++SGYA
Sbjct: 221 KSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANN 280
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G E I LF +M++ ++ D +T+ + A ++ G +E R + + + + R
Sbjct: 281 GYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELAR-WLDGYISKSEYRDDTFV 339
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
T +ID+ ++ G + A+ +++ D + W+ ++ +HG+
Sbjct: 340 NTGLIDMYAKCGSIYLARCVFDRVA-DKDVVLWSVMIMGYGLHGH 383
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/587 (38%), Positives = 353/587 (60%), Gaps = 30/587 (5%)
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
Q+H HI+K GF + +PLV L A D +P ++++
Sbjct: 25 QLHTHIIKLGFQN-----NPLV-----LTKFTSASSNLDAIPYAMSLVFS---------- 64
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLERE-AIDLFREMRLEGLAMDQFTFGSVL 181
VE++R D+ ++T+I ++ + AI + M G++ +++ F VL
Sbjct: 65 -VEDARVY-------DAFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVL 116
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS-IKYAESVFRTMAWKNV 240
AC GL L GK +H +++ D++FV + +V MYC C +++A +F M +
Sbjct: 117 KACAGLRDLNLGKAVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDP 176
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+WTAM+ GY + G S AV +F MQ G+ PDD T+ SV+S+C +L +LE G
Sbjct: 177 VTWTAMIGGYARLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESY 236
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ + +SNALV + KCG+++ + LF M+ R VSWT+++ G A G+ E
Sbjct: 237 IEKERVLKTVELSNALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEA 296
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LFE+M + G+ P+++ IG+LSACS +GLVE+GR YF M +++GI P +HY CM+D
Sbjct: 297 VSLFEEMKASGMVPEDIAFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVD 356
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+LSRAG + EA F+ +MP P+ I W TL+S+CR+HG +++G+ ++ L+ +P + ++
Sbjct: 357 LLSRAGLVTEALEFVERMPIEPNPIIWRTLISACRVHGELKLGESISKQLIRNEPMHESN 416
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS+IY W+ S++R M +KG++K PG + I+ + +H F D S ++I
Sbjct: 417 YVLLSNIYGKMLDWEKKSKIRVAMGKKGIQKVPGSTMIELDNEIHEFIVGDRSHNQYNEI 476
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
+ ++ R+M + GY P + V D++ +K L+ HSEKLAIAF LL PPG PIR+
Sbjct: 477 IKMVNEMGREMKRAGYAPTTTEVFLDIDEEDKEDALSRHSEKLAIAFALLNTPPGSPIRI 536
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCH+A+K+ISKI REI++RD RFH F++G+CSCGDFW
Sbjct: 537 TKNLRVCGDCHSASKFISKIYNREIVMRDRSRFHHFRDGQCSCGDFW 583
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 175/351 (49%), Gaps = 36/351 (10%)
Query: 4 HDGVSWNLLISGHA-SHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGR 62
+D ++ +I +A S S ++A+ YNLML G+ ++ F +L + R ++LG+
Sbjct: 71 YDAFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISP-NKYAFPFVLKACAGLRDLNLGK 129
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKL-GLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+HG ++KFGF +FV + +V MY G + A++ FDE+P+ + V + MI G R
Sbjct: 130 AVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARL 189
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G A+ LFR+M++ G+ D T SVL
Sbjct: 190 -------------------------------GQSAGAVGLFRKMQIAGVCPDDVTMVSVL 218
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+AC L ALE GK I ++I + V + +ALVDM+ KC + A +FR M+ + +V
Sbjct: 219 SACTDLGALELGKWIESYIEKERVLKTVELSNALVDMFAKCGDVDKALGLFRNMSKRTIV 278
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHGR 300
SWT+++VG +G EAV +F M+ +G+ P+D ++S+C++ +E G Q F
Sbjct: 279 SWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLSACSHSGLVERGRQYFSEM 338
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
+ G++ I +V + G + ++ M + + + W L+S
Sbjct: 339 TRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIWRTLISA 389
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 32/203 (15%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V+W +I G+A G AV ++ M G+ +T ++L + ++L
Sbjct: 171 MPKLDPVTWTAMIGGYARLGQSAGAVGLFRKMQIAGVCP-DDVTMVSVLSACTDLGALEL 229
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ I +I K V + + LVDM+AK G + A F + ++ IV + ++I GL
Sbjct: 230 GKWIESYIEKERVLKTVELSNALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAM 289
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G RG+ EA+ LF EM+ G+ + F +
Sbjct: 290 HG---------RGL----------------------EAVSLFEEMKASGMVPEDIAFIGL 318
Query: 181 LTACGGLLALEEGKQIHAFIIRN 203
L+AC +E G+Q + + R
Sbjct: 319 LSACSHSGLVERGRQYFSEMTRQ 341
>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
Length = 681
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/635 (36%), Positives = 355/635 (55%), Gaps = 40/635 (6%)
Query: 16 HASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL--GRQIHGHILKFGF 73
H+ GS A++V+ + + + T L +S+ R DL G + G+
Sbjct: 84 HSRRGSPASALRVFRALPPAARPDSTTFT----LALSACARLGDLRGGESVRDRAFDAGY 139
Query: 74 GSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRG 133
VFV S L+ +YA+ G + DA + FD +P +
Sbjct: 140 KDDVFVCSSLLHLYARWGAMGDAVKVFDRMPRR--------------------------- 172
Query: 134 MKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEG 193
D ++W+TM+ G + G +AI ++R MR +G+ D+ V+ AC + G
Sbjct: 173 ----DRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMG 228
Query: 194 KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQN 253
+H ++R+ + +V ++LVDMY K + A VF M +N VSW+AM+ G+ QN
Sbjct: 229 ASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQN 288
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF-ITV 312
G S+EA+++F NMQ +GI+PD L S + +C+N+ L+ G HG + F +
Sbjct: 289 GQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHG--FIVRRFDFNCIL 346
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGL 372
A + Y KCG++ + LFN ++ RD + W A+++ G+ + + LF++M G+
Sbjct: 347 GTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGM 406
Query: 373 KPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAK 432
+PD T +LSA S +GLVE+G+ +F MV + I P HY C++D+L+R+G +EEA
Sbjct: 407 RPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKITPAEKHYVCLVDLLARSGLVEEAS 466
Query: 433 SFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKG 492
+ M P W LLS C + +E+G+ A+++LEL P + L+S++YA+
Sbjct: 467 DLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAATK 526
Query: 493 KWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMI 552
KWD V Q+R+ M++ G +K PGCS I+ + H F +D S P ++I +++ KL+ +M
Sbjct: 527 KWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHAFLMEDQSHPQREEIVSKVAKLDLEMR 586
Query: 553 KEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHN 612
K GY+P V HD+E K + L++HSEKLAIAFGLL PG + ++KNLRVC DCH+
Sbjct: 587 KMGYIPRTEFVYHDLEEEVKEQQLSYHSEKLAIAFGLLNTGPGTRLVIIKNLRVCGDCHD 646
Query: 613 ATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
A KYISKI REI+VRDA RFH FK+G CSC D+W
Sbjct: 647 AIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 193/393 (49%), Gaps = 51/393 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V+W+ +++G S G DA+++Y M +DG+ + + +++R V +
Sbjct: 169 MPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARN-VRM 227
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +HGH+L+ G V + LVDMYAK GL+ A R F + +N V ++ MI+G +
Sbjct: 228 GASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQ 287
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G +E+ RLFR M+ G+ D S
Sbjct: 288 NGQSDEALRLFRNMQ-------------------------------ASGIQPDSGALVSA 316
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC + L+ G+ +H FI+R N +G+A +DMY KC S+ A+ +F ++ +++
Sbjct: 317 LLACSNIGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDL 375
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+ W AM+ G +G ++A+ +F M G+ PD T S++S+ ++ +EEG + G
Sbjct: 376 ILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFG- 434
Query: 301 SLVTGLISFITVSNA------LVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAK 353
+++ ++ A LV + G +E++ L M V+ W AL+SG
Sbjct: 435 ----CMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLN 490
Query: 354 FGKANETIDLFEKMLSH--GLKPDEVTLIGVLS 384
N+ ++L E + + L+PD+V ++ ++S
Sbjct: 491 ----NKKLELGESIADNILELQPDDVGVLALVS 519
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 143/321 (44%), Gaps = 39/321 (12%)
Query: 195 QIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG-YGQN 253
++HA +I + + + S+L Y + + AES A + ++ ++ + +
Sbjct: 29 RLHALLIVSSSATHTLI-SSLAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHSRR 87
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVS 313
G A+++F + PD T +S+CA L L G R+ G + V
Sbjct: 88 GSPASALRVFRALP-PAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVC 146
Query: 314 NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLK 373
++L+ Y + G + D+ ++F+ M RD V+W+ +V+G+ G+ + I ++ +M G+K
Sbjct: 147 SSLLHLYARWGAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVK 206
Query: 374 PDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKS 433
DEV +IGV+ AC+ A V G +++ +G+R T ++D+ ++ G L+ A
Sbjct: 207 GDEVVMIGVIQACTAARNVRMGASVHGHLLR-HGMRMDVVTATSLVDMYAKNGLLDVA-- 263
Query: 434 FINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGK 493
CR+ G + N S+ + S +A G+
Sbjct: 264 --------------------CRVFG-------------LMVHRNDVSWSAMISGFAQNGQ 290
Query: 494 WDHVSQLRRTMREKGVRKDPG 514
D +L R M+ G++ D G
Sbjct: 291 SDEALRLFRNMQASGIQPDSG 311
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 241/679 (35%), Positives = 371/679 (54%), Gaps = 63/679 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + VSW +I G+A DAV ++ M++D + +T ++ + ++
Sbjct: 195 MSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET 254
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +++ I G + S LVDMY K I AKR FDE N+ + N M + +R
Sbjct: 255 GEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR 314
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+GL REA+ +F M G+ D+ + S
Sbjct: 315 QGLT-------------------------------REALGVFNLMMDSGVRPDRISMLSA 343
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+++C L + GK H +++RN + + +AL+DMY KC A +F M+ K V
Sbjct: 344 ISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTV 403
Query: 241 VSWTAMLVGYGQNG-------------------------------CSEEAVKIFCNMQ-R 268
V+W +++ GY +NG EEA+++FC+MQ +
Sbjct: 404 VTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQ 463
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIED 328
G+ D T+ S+ S+C +L +L+ + G+ + + LV + +CG+ E
Sbjct: 464 EGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPES 523
Query: 329 SHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
+ +FN + RD +WTA + A G A I+LF+ M+ GLKPD V +G L+ACS
Sbjct: 524 AMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSH 583
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
GLV++G+ F M+K +G+ P HY CM+D+L RAG LEEA I MP P+ + W
Sbjct: 584 GGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWN 643
Query: 449 TLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
+LL++CR+ GNVE+ +AAE + L P SYVLLS++YAS G+W+ ++++R +M+EKG
Sbjct: 644 SLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKG 703
Query: 509 VRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVE 568
+RK PG S I+ + + H F++ D S P I A L++++++ G+VPD+S+VL DV+
Sbjct: 704 LRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVD 763
Query: 569 LSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVR 628
EKI ML+ HSEKLA+A+GL+ G IR+VKNLRVCSDCH+ K+ SK+ REI++R
Sbjct: 764 EKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILR 823
Query: 629 DAVRFHLFKNGECSCGDFW 647
D RFH + G+CSCGDFW
Sbjct: 824 DNNRFHYIRQGKCSCGDFW 842
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 146/539 (27%), Positives = 245/539 (45%), Gaps = 104/539 (19%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
+N LI G+AS G N+A+ ++ M+ G+ + TF L + R G QIHG I
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISP-DKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+K G+ +FV + LV YA+ G + + +R
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGEL-------------------------------DSAR 189
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDL-FREMRLEGLAMDQFTFGSVLTACGGL 187
++F M +++ +SWT+MI G + ++A+DL FR +R E + + T V++AC L
Sbjct: 190 KVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKL 249
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
LE G++++AFI + + N + SALVDMY KC +I A+ +F N+ AM
Sbjct: 250 EDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMA 309
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
Y + G + EA+ +F M +G+ PD ++ S ISSC+ L ++ G HG L G
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFE 369
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN--------- 358
S+ + NAL+ Y KC + + R+F+ M+ + V+W ++V+GY + G+ +
Sbjct: 370 SWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM 429
Query: 359 ----------------------ETIDLFEKMLSH-GLKPDEVTLIGVLSACSRAGLVEKG 395
E I++F M S G+ D VT++ + SAC G ++
Sbjct: 430 PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLA 489
Query: 396 R--HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP-------------- 439
+ +Y+ +++ GI+ T ++D+ SR G E A S N +
Sbjct: 490 KWIYYY---IEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAM 546
Query: 440 --------------------FPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
PD + + L++C G V+ GK S+L+L +P
Sbjct: 547 AMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSP 605
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 136/253 (53%), Gaps = 6/253 (2%)
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC---KSIKYAESVFR-TMAWKNVVSWTA 245
++E K H + + ++V + LV C+ +S+ +A+ VF + ++ + +
Sbjct: 45 IDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNS 104
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
++ GY +G EA+ +F M +GI PD +T +S+CA + G Q HG + G
Sbjct: 105 LIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMG 164
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
+ V N+LV FY +CG ++ + ++F+EM+ R+ VSWT+++ GYA+ A + +DLF
Sbjct: 165 YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFF 224
Query: 366 KML-SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+M+ + P+ VT++ V+SAC++ +E G + ++ GI + ++D+ +
Sbjct: 225 RMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAF-IRNSGIEVNDLMVSALVDMYMK 283
Query: 425 AGRLEEAKSFINK 437
++ AK ++
Sbjct: 284 CNAIDVAKRLFDE 296
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/550 (38%), Positives = 335/550 (60%), Gaps = 9/550 (1%)
Query: 106 KNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM 165
++ V+ T++T R + +R F ++ D +SW M +Q+ REA+ LF M
Sbjct: 253 RDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERM 312
Query: 166 RLEGLAMDQFTFGSVLTACGGL---LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC 222
LEG+ TF + LTAC A GK+I + + + + V +A ++MY KC
Sbjct: 313 LLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKC 372
Query: 223 KSIKYAESVFRTMA--WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLG 279
S+ A +VF ++ ++ ++W +ML YG +G +EA ++F M+ ++P+ T
Sbjct: 373 GSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFV 432
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM--N 337
+V+ + + S+ +G + H R + G S + NAL+ Y KCG+++D+ +F++ N
Sbjct: 433 AVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSN 492
Query: 338 VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH 397
D ++WT+LV+GYA++G+A + LF M G++P+ +T I L+AC+ G +E+G
Sbjct: 493 QEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGGKLEQGCE 552
Query: 398 YFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIH 457
M ++GI P H++C++D+L R GRL+EA+ + + D I W LL +C+
Sbjct: 553 LLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVITWMALLDACKNS 611
Query: 458 GNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSW 517
+E G+ AE +++LDP +SY++L+S+YA+ G+W+ + +R+TM +KG+R DPGCS
Sbjct: 612 KELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSA 671
Query: 518 IKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLN 577
++ +H FSA D S P S++IY ELE+L+ + GYV D VLHDV K ++L
Sbjct: 672 VEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQEHKERLLM 731
Query: 578 HHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFK 637
HSEKLAIAFGL+ P G P+RV+KNLRVCSDCH ATK ISK+T R+IL+RD+ R+H F
Sbjct: 732 RHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSRYHHFT 791
Query: 638 NGECSCGDFW 647
+G CSCGD+W
Sbjct: 792 SGTCSCGDYW 801
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 129/482 (26%), Positives = 211/482 (43%), Gaps = 68/482 (14%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG--- 61
D V+WN +IS +GS +A++++ M DG + +TF ++L CV+ G
Sbjct: 75 DVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVL-----DSCVEAGLLS 129
Query: 62 ----RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF----DELPEKNIVMYNT 113
R IHG I+ G FV + LVD Y KLG + DA F DE P ++V +
Sbjct: 130 LEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSA 189
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
MI+ + G +ES RLF M LEG
Sbjct: 190 MISACWQNGWPQESLRLFYAMN-------------------------------LEGTKPS 218
Query: 174 QFTFGSVLTACGGL-------LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIK 226
T SVL AC L LE+ ++ + +DNV G+ L+ Y + +
Sbjct: 219 GVTLVSVLNACSMLPVGSATAFVLEQAMEVVSAT-----RDNVL-GTTLLTTYARSNDLS 272
Query: 227 YAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCA 286
A + F + +VVSW AM Y Q+ EA+ +F M G+ P T + +++CA
Sbjct: 273 RARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACA 332
Query: 287 NLASLEE---GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV--RDE 341
G + GL V+NA + Y KCG++ D+ +F ++ RD
Sbjct: 333 AYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDC 392
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSHGL-KPDEVTLIGVLSACSRAGLVEKGRHYFE 400
++W ++++ Y G E +LF+ M + L KP++VT + VL A + + +GR
Sbjct: 393 ITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHA 452
Query: 401 IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF-PPDAIGWATLLSSCRIHGN 459
+V G ++++ ++ G L++A++ +K D I W +L++ +G
Sbjct: 453 RVVSN-GFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQ 511
Query: 460 VE 461
E
Sbjct: 512 AE 513
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 203/426 (47%), Gaps = 56/426 (13%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP---EKNIVMYNTMITG 117
GR+IH I F +G+ L+ MY+K G + DAK+ FD LP ++++V +N MI+
Sbjct: 26 GRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISA 85
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
LR G E+ +LFR M D D + TF
Sbjct: 86 FLRNGSAREALQLFRDM-DHDGAP-----------------------------PPNSVTF 115
Query: 178 GSVLTAC--GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
SVL +C GLL+LE+ + IH I+ + FV +ALVD Y K S+ A VF
Sbjct: 116 VSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRK 175
Query: 236 A----WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASL 291
+ ++V+ +AM+ QNG +E++++F M G +P TL SV+++C+ L +
Sbjct: 176 SDEEPSTSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSML-PV 234
Query: 292 EEGTQF---HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
T F +V+ + + L+T Y + ++ + F+ + D VSW A+
Sbjct: 235 GSATAFVLEQAMEVVSATRDNV-LGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMA 293
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS-----RAGLVEKGRHYFEIMV 403
+ Y + + E + LFE+ML G++P T I L+AC+ A + K + ++
Sbjct: 294 AAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGK---RIQSLL 350
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM-PFPPDAIGWATLLSSCRIHGNVEI 462
+E G+ +++ ++ G L +A++ ++ P D I W ++L++ HG +
Sbjct: 351 EEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHG---L 407
Query: 463 GKWAAE 468
GK A E
Sbjct: 408 GKEAFE 413
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 148/285 (51%), Gaps = 11/285 (3%)
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM--- 235
+++ AC L L G++IH+ I D ++N +G+AL+ MY KC S+ A+ F +
Sbjct: 12 ALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRA 71
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGI-EPDDFTLGSVISSC--ANLASLE 292
+ ++VV+W AM+ + +NG + EA+++F +M +G P+ T SV+ SC A L SLE
Sbjct: 72 SKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLE 131
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLF----NEMNVRDEVSWTALV 348
+ HGR + G+ V ALV YGK G+++D+ +F +E V+ +A++
Sbjct: 132 DVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMI 191
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
S + G E++ LF M G KP VTL+ VL+ACS + E ++
Sbjct: 192 SACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEVVSA 251
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+ T ++ +R+ L A++ + + PD + W + ++
Sbjct: 252 TRDNVLGTTLLTTYARSNDLSRARATFDAIQ-SPDVVSWNAMAAA 295
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 120/252 (47%), Gaps = 46/252 (18%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D ++WN +++ + HG +A +++ M + L +++TF +L S+SR + GR+I
Sbjct: 391 DCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREI 450
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP--EKNIVMYNTMITGLLRRG 122
H ++ GF S + + L++MYAK G + DA+ FD+ +++++ + +++ G + G
Sbjct: 451 HARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYG 510
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
E + +LF WT M+ +G+ + TF S LT
Sbjct: 511 QAERALKLF----------WT---------------------MQQQGVRPNHITFISALT 539
Query: 183 ACGGLLALEEGKQI-------HAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
AC LE+G ++ H + + H S +VD+ +C + AE +
Sbjct: 540 ACNHGGKLEQGCELLSGMTPDHGIVPASKH------FSCIVDLLGRCGRLDEAEKLLERT 593
Query: 236 AWKNVVSWTAML 247
+ +V++W A+L
Sbjct: 594 SQADVITWMALL 605
>gi|242090555|ref|XP_002441110.1| hypothetical protein SORBIDRAFT_09g020580 [Sorghum bicolor]
gi|241946395|gb|EES19540.1| hypothetical protein SORBIDRAFT_09g020580 [Sorghum bicolor]
Length = 516
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/487 (44%), Positives = 306/487 (62%), Gaps = 32/487 (6%)
Query: 193 GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
G+Q+HA + + + + V S+L+DMYCKC + A VF ++ KN V WTA++ GY
Sbjct: 30 GRQLHAHFVASPYSADDVVKSSLIDMYCKCGVPEDARKVFDSIGVKNGVVWTALVSGYAS 89
Query: 253 NGCSEEA-------------------------------VKIFCNMQRNGIEPDD-FTLGS 280
NGC+ EA V +F M+R+G+ DD F L +
Sbjct: 90 NGCTGEAIDLFRSMPERGLFAWTALISGFVKAGNNTGAVGLFVEMRRDGVRIDDAFVLAT 149
Query: 281 VISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD 340
V+ A LA+L G Q HG ++ G +S + V NALV Y KC +I + +F + VRD
Sbjct: 150 VVGGAAELAALVLGRQLHGFAITLGFLSSMIVGNALVDMYSKCSDIHSAREVFGGIIVRD 209
Query: 341 EVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
VSWT ++ G A+ G+ E + L+++ML G+KP+EVT +G++ ACS AGLV+KGR F+
Sbjct: 210 VVSWTTILVGEAQHGRVEEVLALYDRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQLFD 269
Query: 401 IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
M +EYGI+P HYTC +D+LSR+G L EA+ I MP+ PD W LLS+C+ H +
Sbjct: 270 SMKREYGIKPGLQHYTCYLDLLSRSGYLSEAEELITTMPYEPDEASWGALLSACKKHNDT 329
Query: 461 EIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKY 520
++ A++LLEL P +P++Y+LLS++YA KWD V+++R+ M E +RK+PG SWI+
Sbjct: 330 QMCLRVADNLLELRPKDPSTYILLSNVYAVNCKWDSVAKVRKIMAEMEIRKEPGYSWIEA 389
Query: 521 KSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHS 580
+F A + ++I LE+L +M K GYVPD SSV+HD+E +EK + L HS
Sbjct: 390 GRESRMFHAGEVPLDIGEEITRFLEELVSEMRKRGYVPDTSSVMHDLEENEKEQHLFLHS 449
Query: 581 EKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGE 640
E+LA+AFG+L PPG IRVVKNLRVC DCH K+IS+I QR+I+VRDA RFH F++G
Sbjct: 450 ERLAVAFGILKSPPGSVIRVVKNLRVCGDCHTVMKFISEIAQRKIIVRDASRFHHFEDGN 509
Query: 641 CSCGDFW 647
CSC +FW
Sbjct: 510 CSCSEFW 516
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 170/327 (51%), Gaps = 5/327 (1%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H H + + + V S L+DMY K G+ DA++ FD + KN V++ +++G
Sbjct: 30 GRQLHAHFVASPYSADDVVKSSLIDMYCKCGVPEDARKVFDSIGVKNGVVWTALVSGYAS 89
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ-FTFGS 179
G E+ LFR M ++ +WT +I+G ++ G A+ LF EMR +G+ +D F +
Sbjct: 90 NGCTGEAIDLFRSMPERGLFAWTALISGFVKAGNNTGAVGLFVEMRRDGVRIDDAFVLAT 149
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
V+ L AL G+Q+H F I ++ VG+ALVDMY KC I A VF + ++
Sbjct: 150 VVGGAAELAALVLGRQLHGFAITLGFLSSMIVGNALVDMYSKCSDIHSAREVFGGIIVRD 209
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FH 298
VVSWT +LVG Q+G EE + ++ M G++P++ T +I +C++ +++G Q F
Sbjct: 210 VVSWTTILVGEAQHGRVEEVLALYDRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQLFD 269
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKA 357
G+ + + + G + ++ L M DE SW AL+S K
Sbjct: 270 SMKREYGIKPGLQHYTCYLDLLSRSGYLSEAEELITTMPYEPDEASWGALLSACKKHNDT 329
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLS 384
+ + + +L L+P + + +LS
Sbjct: 330 QMCLRVADNLLE--LRPKDPSTYILLS 354
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP +W LISG G+ AV ++ M +DG+ +T++ ++ + L
Sbjct: 103 MPERGLFAWTALISGFVKAGNNTGAVGLFVEMRRDGVRIDDAFVLATVVGGAAELAALVL 162
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+HG + GF S + VG+ LVDMY+K I+ A+ F + +++V + T++ G +
Sbjct: 163 GRQLHGFAITLGFLSSMIVGNALVDMYSKCSDIHSAREVFGGIIVRDVVSWTTILVGEAQ 222
Query: 121 RGLVEE-----SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE 168
G VEE R L GMK + +++ +I GL ++ LF M+ E
Sbjct: 223 HGRVEEVLALYDRMLLAGMK-PNEVTFVGLIYACSHAGLVQKGRQLFDSMKRE 274
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 67/127 (52%)
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
+ + + PD F L S+ S+ A L SL G Q H + + + V ++L+ Y KCG
Sbjct: 2 LSDDALRPDHFVLASLASAAARLRSLRLGRQLHAHFVASPYSADDVVKSSLIDMYCKCGV 61
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
ED+ ++F+ + V++ V WTALVSGYA G E IDLF M GL + G + A
Sbjct: 62 PEDARKVFDSIGVKNGVVWTALVSGYASNGCTGEAIDLFRSMPERGLFAWTALISGFVKA 121
Query: 386 CSRAGLV 392
+ G V
Sbjct: 122 GNNTGAV 128
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 245/640 (38%), Positives = 358/640 (55%), Gaps = 66/640 (10%)
Query: 10 NLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHIL 69
N ++ +A+ G +A+ +Y M + G+G ++ T+ +L + +S G +HG ++
Sbjct: 101 NTMLRAYANAGRSYEAIDLYIYMQRMGVG-VNNFTYPFVLKVCASELGAVFGEVVHGQVV 159
Query: 70 KFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRR 129
+ GFGS +FV + LVDMYAK G I DA FD R
Sbjct: 160 RTGFGSDLFVEAALVDMYAKCGEIGDAHEVFD--------------------------RM 193
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
L R D + WT MIT Q +A+ LFR+M+ EG D+ T SV +A G
Sbjct: 194 LIR-----DVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVG---Q 245
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
L +G+ +I A VF M +N +SW +ML G
Sbjct: 246 LGDGRM----------------------------AISRARLVFDRMEERNGISWNSMLSG 277
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
Y QNG +A+ +F MQ + +P+ T ++S+C+ L S G + H + + +
Sbjct: 278 YTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDID 337
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFN--EMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
T+ NA++ Y KCG+++ + +FN E+ RD SW L+SGY G E ++LF +M
Sbjct: 338 TTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRM 397
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
G++P+++T +LSACS AGL+++GR F M K +RP HY CM+D+L RAG
Sbjct: 398 QVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTK-LSVRPEMKHYACMVDMLGRAGF 456
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSI 487
L EA I K+P P W LL +CRIHGN E+G+ AA +L +L+P + YVL+S+I
Sbjct: 457 LNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNI 516
Query: 488 YASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKL 547
YA+ KW V +R+ M+ +G++K S I++ + VH F D SSPY ++Y ++E L
Sbjct: 517 YAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESL 576
Query: 548 NRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVC 607
+M GYVPD+S VLHDVE +K +LN+HSEKLA+AFG++ + G+PI+V KNLRVC
Sbjct: 577 AIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVC 636
Query: 608 SDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
SDCH A K+IS I R+I+VRD RFH F+ G CSCGD+W
Sbjct: 637 SDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 676
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 162/360 (45%), Gaps = 48/360 (13%)
Query: 138 DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIH 197
+S TM+ G EAIDL+ M+ G+ ++ FT+ VL C L G+ +H
Sbjct: 96 NSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVH 155
Query: 198 AFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSE 257
++R ++FV +ALVDMY KC I A VF M ++VV WTAM+ Y Q
Sbjct: 156 GQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPL 215
Query: 258 EAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALV 317
+A+ +F MQ G D+ T SV S+ L GR + +S A +
Sbjct: 216 KALMLFRKMQEEGFLGDEITAISVASAVGQLGD--------GR---------MAISRARL 258
Query: 318 TFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEV 377
+F+ M R+ +SW +++SGY + G+ + + LF +M + P+ V
Sbjct: 259 --------------VFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPV 304
Query: 378 TLIGVLSACSRAGLVEKGR--HYFEIMVK---EYGIRPIHDHYTCMIDILSRAGRLEEAK 432
T + ++SACS G GR H F I K + +R ++D+ + G L+ A
Sbjct: 305 TALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLR------NAIMDMYMKCGDLDTAV 358
Query: 433 SFINKMPF-PPDAIGWATLLSSCRIHGNVEIGKWAAE--SLLELDPYNPASYVLLSSIYA 489
N D W L+S +HG+ GK A E S ++++ P S + A
Sbjct: 359 EMFNNCELGERDVSSWNVLISGYGVHGH---GKEALELFSRMQVEGVEPNDITFTSILSA 415
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 119/260 (45%), Gaps = 35/260 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M +G+SWN ++SG+ +G DA+ ++N M + + + +T M+ S L
Sbjct: 263 MEERNGISWNSMLSGYTQNGRPTDALSLFNQM-QASECDPNPVTALIMVSACSYLGSKHL 321
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFD--ELPEKNIVMYNTMITGL 118
GR++H ++ + + ++DMY K G + A F+ EL E+++ +N +I+G
Sbjct: 322 GRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGY 381
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
G+ +G E A++LF M++EG+ + TF
Sbjct: 382 -----------------------------GVHGHGKE--ALELFSRMQVEGVEPNDITFT 410
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
S+L+AC ++EG++ A + + + + + +VDM + + A + + + +
Sbjct: 411 SILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSR 470
Query: 239 NVVS-WTAMLVGYGQNGCSE 257
W A+L+ +G +E
Sbjct: 471 PSDEVWGALLLACRIHGNTE 490
>gi|302804779|ref|XP_002984141.1| hypothetical protein SELMODRAFT_119895 [Selaginella moellendorffii]
gi|300147990|gb|EFJ14651.1| hypothetical protein SELMODRAFT_119895 [Selaginella moellendorffii]
Length = 487
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/488 (45%), Positives = 311/488 (63%), Gaps = 6/488 (1%)
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLA-LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
M+ EG+ D+ F + L ACGG LA L GK IH+ ++ + N V +ALV+MY K
Sbjct: 1 MQQEGVLPDKICFVATLNACGGALADLRLGKLIHSCVLEAGLESNTVVATALVNMYGKAG 60
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE---PDDFTLGS 280
+ A VFR + K++VSWTA++ Y + EA+++F M +G++ PD
Sbjct: 61 CLDEATRVFRGLGRKDLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAF 120
Query: 281 VISSCANLASLEEGTQFHGRSLVTGLISFITVSN-ALVTFYGKCGNIEDSHRLFNEMNVR 339
++ +CA L++ EG H R G S V ++ YGKCGN+ +H +F+ M+ R
Sbjct: 121 LLQACATLSAAAEGRLAHRRIQECGYDSSDGVLGLGIINMYGKCGNLRAAHEVFDGMSER 180
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
D V+WT ++SGYA G + E++ +F +M G KPD V+L+ VLS CS AGLVE+G +F
Sbjct: 181 DTVAWTTIISGYAHHGHSEESLLMFWRMQQDGSKPDGVSLLCVLSVCSHAGLVEQGWDFF 240
Query: 400 EIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+ KE+G+ P HY CMID+L R+G LE A+ I +MPF A+ WA L++C++H +
Sbjct: 241 LDITKEFGVEPGEKHYGCMIDLLGRSGDLEAAEVMIRRMPFQATAMNWAIFLAACKVHSD 300
Query: 460 VEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIK 519
E GK AAE +LEL+P PA+YV LS+IYA+ G+WD V ++R M+ G++KDPG S I+
Sbjct: 301 TERGKRAAEKVLELEPV-PAAYVSLSNIYAAAGEWDQVDRVRSAMKAMGLQKDPGRSSIE 359
Query: 520 YKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHH 579
SRVH F A D S P + +IY LE L R+M GYVPD VL +V +K ++L H
Sbjct: 360 VNSRVHEFWAGDKSHPRAAEIYGLLESLTRQMEGSGYVPDTKLVLLNVSEEQKERLLCFH 419
Query: 580 SEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNG 639
SEKLAIAFGLL P G +R++KNLRVC DCH A K++S+I REI +RD+ RFH F++G
Sbjct: 420 SEKLAIAFGLLSTPAGSSLRIIKNLRVCGDCHTAAKFVSRIAGREIFMRDSQRFHHFQDG 479
Query: 640 ECSCGDFW 647
CSCGD+W
Sbjct: 480 HCSCGDYW 487
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 126/243 (51%), Gaps = 37/243 (15%)
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
LG+ IH +L+ G S V + LV+MY K G +
Sbjct: 29 LGKLIHSCVLEAGLESNTVVATALVNMYGKAGCL-------------------------- 62
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL---AMDQFT 176
+E+ R+FRG+ KD +SWT +++ + L REA+ LFREM L GL D+
Sbjct: 63 -----DEATRVFRGLGRKDLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSY 117
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIR--NDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
F +L AC L A EG+ H I D D V +G +++MY KC +++ A VF
Sbjct: 118 FAFLLQACATLSAAAEGRLAHRRIQECGYDSSDGV-LGLGIINMYGKCGNLRAAHEVFDG 176
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
M+ ++ V+WT ++ GY +G SEE++ +F MQ++G +PD +L V+S C++ +E+G
Sbjct: 177 MSERDTVAWTTIISGYAHHGHSEESLLMFWRMQQDGSKPDGVSLLCVLSVCSHAGLVEQG 236
Query: 295 TQF 297
F
Sbjct: 237 WDF 239
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 7/171 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNL--SRITFSTMLIMSSSRRCVDLGR 62
D VSW L+S ++ +A++++ M GL R F+ +L ++ GR
Sbjct: 76 DLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAFLLQACATLSAAAEGR 135
Query: 63 QIHGHILKFGFGSYVFV-GSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
H I + G+ S V G +++MY K G + A FD + E++ V + T+I+G
Sbjct: 136 LAHRRIQECGYDSSDGVLGLGIINMYGKCGNLRAAHEVFDGMSERDTVAWTTIISGYAHH 195
Query: 122 GLVEESRRLFRGMKD----KDSISWTTMITGLMQNGLEREAIDLFREMRLE 168
G EES +F M+ D +S +++ GL + D F ++ E
Sbjct: 196 GHSEESLLMFWRMQQDGSKPDGVSLLCVLSVCSHAGLVEQGWDFFLDITKE 246
>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
Length = 702
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 236/650 (36%), Positives = 364/650 (56%), Gaps = 37/650 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+WN ++S G ++AV+ M+ G+ +TF++ L S +D+GR++
Sbjct: 83 DVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGV-RPDGVTFASALPACSRLELLDVGREM 141
Query: 65 HGHILKFG-FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
H +++K + FV S LVDMYA + A++ FD +P+
Sbjct: 142 HAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSG---------------- 185
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQFTFGSVLT 182
K W MI G Q G++ EA+ LF M E G + T SVL
Sbjct: 186 -------------KQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLP 232
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
AC A + +H ++++ N FV +AL+DMY + A +F + +VVS
Sbjct: 233 ACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVS 292
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQR---NGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
W ++ G G +A ++ MQ+ G+ P+ TL +++ CA LA+ G + HG
Sbjct: 293 WNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHG 352
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
++ L + + V +ALV Y KCG + S +F+ + R+ ++W L+ Y G E
Sbjct: 353 YAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGE 412
Query: 360 TIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
LF++M + G +P+EVT + L+ACS +G+V++G F M +++G+ P D C+
Sbjct: 413 ATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACV 472
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAI-GWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
+DIL RAGRL+EA + + M + W+T+L +CR+H NV +G+ A E LLEL+P
Sbjct: 473 VDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEE 532
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
+ YVLL +IY++ G+W +++R MR +GV K+PGCSWI+ +H F A + + P S
Sbjct: 533 ASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPAS 592
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
++++A +E L +M+ GY PD S VLHD++ +K +L HSEKLAIAFGLL PG
Sbjct: 593 EEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGAT 652
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
IRV KNLRVC+DCH A K++SK+ REI++RD RFH F+NG+CSCGD+W
Sbjct: 653 IRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 702
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 132/484 (27%), Positives = 225/484 (46%), Gaps = 61/484 (12%)
Query: 51 MSSSRRCVDLGRQIHGHILKFGF--GSYVFVGSPLVDMYAKLGLIYDAKRGF-DELPEK- 106
+ ++ V LGR+ H LK G G F + L+ MYA+LGL+ DA+R F P +
Sbjct: 23 LPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRG 82
Query: 107 NIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR 166
++V +NTM++ L+ Q+G+ EA+ +M
Sbjct: 83 DVVTWNTMVSVLV-------------------------------QSGMFDEAVQTLYDMV 111
Query: 167 LEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSI 225
G+ D TF S L AC L L+ G+++HA++I++D N FV SALVDMY + +
Sbjct: 112 ALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQV 171
Query: 226 KYAESVFRTM--AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQ-RNGIEPDDFTLGSVI 282
A VF + + K + W AM+ GY Q G EEA+++F M+ G P + T+ SV+
Sbjct: 172 GKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVL 231
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
+CA + HG + G+ V NAL+ Y + G + + R+F +++ D V
Sbjct: 232 PACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVV 291
Query: 343 SWTALVSGYAKFGKANETIDL---FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
SW L++G G + L +++ G+ P+ +TL+ +L C+ +G+
Sbjct: 292 SWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKE-- 349
Query: 400 EIMVKEYGIRPIHDH----YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCR 455
+ Y +R D + ++D+ ++ G L +++ +++P + I W L+ +
Sbjct: 350 ---IHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLP-RRNTITWNVLIMAYG 405
Query: 456 IHG-----NVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTM-REKGV 509
+HG V + A E P N +++ + + G D QL M R+ GV
Sbjct: 406 MHGLGGEATVLFDRMTASG--EARP-NEVTFMAALAACSHSGMVDRGLQLFHAMERDHGV 462
Query: 510 RKDP 513
P
Sbjct: 463 EPTP 466
>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
Length = 745
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/644 (36%), Positives = 358/644 (55%), Gaps = 33/644 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +S +I + HG + A+ Y M GL T++ +L SS + G+ I
Sbjct: 134 DIISVTAMIGAYVRHGKNDLALDTYWKMRSQGL-EPDAFTYAAILGACSSPDFLLDGKHI 192
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H HIL+ + V + L+ MYAK G +
Sbjct: 193 HKHILESKHFGNISVRNALITMYAKC-------------------------------GSL 221
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
++S+ LF M KD +SW MI G +++A LF M G D +TF S+L AC
Sbjct: 222 KDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGAC 281
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
LE+G+ +H I + + + L+ M+ +C S++ A F ++ K + +W
Sbjct: 282 ASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWN 341
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
ML Y Q ++A+ ++ NM G PD FT SV+ SCA+L +L EG H S
Sbjct: 342 TMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSC 401
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G + + ALV Y KCG++ D+ + F+ ++ +D VSW+A+++ A+ G A E ++L
Sbjct: 402 GFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELS 461
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
M G+ +EVT VL ACS G + +G YF + +++GI ++ ID+L R
Sbjct: 462 HLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGR 521
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG L+EA+ ++ MPF + TLL C++HG+V GK + ++ L+P NP SYVLL
Sbjct: 522 AGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLL 581
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
+++YA+ G+WD V++LRR MR+KGV++ GCS I+Y+ +++ FS D S+P + +I AEL
Sbjct: 582 NNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAEL 641
Query: 545 EKLNRKMI-KEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
E+L +M +EGYVPD V HDV +K ++L HSEK+A+ FGL+ PPG +R++KN
Sbjct: 642 ERLYSRMKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTLRIIKN 701
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LRVCSDCH K SKIT R I+VRD RFH F+ G CSCGD+W
Sbjct: 702 LRVCSDCHTVGKLASKITGRRIIVRDGTRFHHFEGGICSCGDYW 745
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 126/458 (27%), Positives = 227/458 (49%), Gaps = 35/458 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
+ SW++L+ + + +A++VY M++ + ++ T S++L + V+ GR +
Sbjct: 32 NAFSWSILVECYVQNAMYQEALEVYKEMVRKEI-SIDAYTLSSVLAACTKLLDVEEGRMV 90
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
+ GF V V + L+ ++AK G +
Sbjct: 91 QRKAEELGFEKDVVVATSLIHLFAKC-------------------------------GCL 119
Query: 125 EESRRLFRGMKD-KDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
EE+ +FR M +D IS T MI +++G A+D + +MR +GL D FT+ ++L A
Sbjct: 120 EEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGA 179
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C L +GK IH I+ + H N+ V +AL+ MY KC S+K ++S+F TM K+VVSW
Sbjct: 180 CSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSW 239
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
AM+ Y G ++A +F M G PD +T S++ +CA+ LE+G H R
Sbjct: 240 NAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITA 299
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
G + N L++ + +CG++E + R F + ++ +W +++ YA+F K + + L
Sbjct: 300 RGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFL 359
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
++ ML G PD T V+ +C+ G + +G+ E G T ++++ +
Sbjct: 360 YKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECST-SCGFEKDVILGTALVNMYA 418
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+ G L +AK + + D + W+ ++++ HG+ E
Sbjct: 419 KCGSLADAKKSFDGIS-NKDVVSWSAMIAASAQHGHAE 455
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 189/330 (57%), Gaps = 3/330 (0%)
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
E++R++F +K +++ SW+ ++ +QN + +EA+++++EM + +++D +T SVL AC
Sbjct: 19 EDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVRKEISIDAYTLSSVLAAC 78
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM-AWKNVVSW 243
LL +EEG+ + + +V V ++L+ ++ KC ++ AESVFR+M A ++++S
Sbjct: 79 TKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISV 138
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
TAM+ Y ++G ++ A+ + M+ G+EPD FT +++ +C++ L +G H L
Sbjct: 139 TAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACSSPDFLLDGKHIHKHILE 198
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
+ I+V NAL+T Y KCG+++DS LF M+V+D VSW A+++ Y +G + L
Sbjct: 199 SKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSL 258
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F +M + G PD T +L AC+ +E GR + + G +I + +
Sbjct: 259 FHRMCTLGHTPDIYTFSSILGACASPKRLEDGR-MLHVRITARGFDRDFAMQNNLISMFT 317
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
R G LE A+ + + + W T+L++
Sbjct: 318 RCGSLESARRYFYSIE-KKELGAWNTMLAA 346
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 173/351 (49%), Gaps = 37/351 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRI-TFSTMLIMSSSRRCVD 59
M D VSWN +I+ + +G DA +++ M LG+ I TFS++L +S + ++
Sbjct: 231 MDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCT--LGHTPDIYTFSSILGACASPKRLE 288
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
GR +H I GF + + L+ M+ + G + A+R F + +K +
Sbjct: 289 DGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGA--------- 339
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
W TM+ Q ++A+ L++ M LEG D+FTF S
Sbjct: 340 ----------------------WNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSS 377
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
V+ +C L AL EGK IH + +V +G+ALV+MY KC S+ A+ F ++ K+
Sbjct: 378 VVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKD 437
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FH 298
VVSW+AM+ Q+G +EEA+++ M GI ++ T SV+ +C++ L EG F
Sbjct: 438 VVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFM 497
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
G S G+ + + G+ G ++++ + + M + VS+ ALV+
Sbjct: 498 GLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFK--VSFVALVT 546
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 139/255 (54%), Gaps = 7/255 (2%)
Query: 208 NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQ 267
+ F+ + ++ MY KCKS + A VF + +N SW+ ++ Y QN +EA++++ M
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60
Query: 268 RNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIE 327
R I D +TL SV+++C L +EEG ++ G + V+ +L+ + KCG +E
Sbjct: 61 RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120
Query: 328 DSHRLFNEMN-VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSAC 386
++ +F M +RD +S TA++ Y + GK + +D + KM S GL+PD T +L AC
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180
Query: 387 SRAGLVEKGRHYFEIMV--KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDA 444
S + G+H + ++ K +G + + +I + ++ G L+++KS M D
Sbjct: 181 SSPDFLLDGKHIHKHILESKHFGNISVRN---ALITMYAKCGSLKDSKSLFLTMDV-KDV 236
Query: 445 IGWATLLSSCRIHGN 459
+ W ++++ ++G+
Sbjct: 237 VSWNAMIAAYTLYGH 251
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 87/173 (50%), Gaps = 5/173 (2%)
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG 371
++N ++ YGKC + ED+ ++F+ + R+ SW+ LV Y + E ++++++M+
Sbjct: 4 LANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVRKE 63
Query: 372 LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEA 431
+ D TL VL+AC++ VE+GR + +E G T +I + ++ G LEEA
Sbjct: 64 ISIDAYTLSSVLAACTKLLDVEEGR-MVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEA 122
Query: 432 KSFINKMPFPPDAIGWATLLSSCRIHGNVEIG---KWAAESL-LELDPYNPAS 480
+S M D I ++ + HG ++ W S LE D + A+
Sbjct: 123 ESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAA 175
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/522 (40%), Positives = 325/522 (62%), Gaps = 1/522 (0%)
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+R LF M + D + + +M G + E LF E+ +G+ D +TF S+L AC
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
ALEEG+Q+H ++ DNV+V L++MY +C+ + A VF + VV + AM
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ GY + EA+ +F MQ ++P++ TL SV+SSCA L SL+ G H +
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
++ V+ AL+ + KCG+++D+ +F +M +D +W+A++ YA GKA +++ +FE+
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFER 321
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M S ++PDE+T +G+L+ACS G VE+GR YF MV ++GI P HY M+D+LSRAG
Sbjct: 322 MRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAG 381
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
LE+A FI+K+P P + W LL++C H N+++ + +E + ELD + YV+LS+
Sbjct: 382 NLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSN 441
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
+YA KW++V LR+ M+++ K PGCS I+ + VH F + D + +++ L++
Sbjct: 442 LYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDE 501
Query: 547 LNRKMIKEGYVPDMSSVLH-DVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
+ +++ GYVPD S V+H ++ EK L +HSEKLAI FGLL PPG IRVVKNLR
Sbjct: 502 MVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLR 561
Query: 606 VCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VC DCHNA K IS I R++++RD RFH F++G+CSCGDFW
Sbjct: 562 VCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 185/365 (50%), Gaps = 38/365 (10%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V +N + G++ + + ++ +L+DG+ TF ++L + + ++ GRQ+
Sbjct: 93 DIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILP-DNYTFPSLLKACAVAKALEEGRQL 151
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +K G V+V L++MY + + A+ FD + E +V YN MI
Sbjct: 152 HCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMI--------- 202
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
TG + EA+ LFREM+ + L ++ T SVL++C
Sbjct: 203 ----------------------TGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSC 240
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L +L+ GK IH + ++ V V +AL+DM+ KC S+ A S+F M +K+ +W+
Sbjct: 241 ALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWS 300
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
AM+V Y +G +E+++ +F M+ ++PD+ T ++++C++ +EEG ++ + +
Sbjct: 301 AMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSK 360
Query: 305 -GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKANETID 362
G++ I ++V + GN+ED++ +++ + + W L++ + ++ +D
Sbjct: 361 FGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACS----SHNNLD 416
Query: 363 LFEKM 367
L EK+
Sbjct: 417 LAEKV 421
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 146/276 (52%), Gaps = 6/276 (2%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC---KSIKYAESVFRTMAWKNVVSWTA 245
+L E QI A+ I++ +D FV L++ + S+ YA +F M+ ++V + +
Sbjct: 41 SLRELMQIQAYAIKSHIEDVSFVAK-LINFCTESPTESSMSYARHLFEAMSEPDIVIFNS 99
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
M GY + E +F + +GI PD++T S++ +CA +LEEG Q H S+ G
Sbjct: 100 MARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLG 159
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
L + V L+ Y +C +++ + +F+ + V + A+++GYA+ + NE + LF
Sbjct: 160 LDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFR 219
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
+M LKP+E+TL+ VLS+C+ G ++ G+ + K++ T +ID+ ++
Sbjct: 220 EMQGKYLKPNEITLLSVLSSCALLGSLDLGK-WIHKYAKKHSFCKYVKVNTALIDMFAKC 278
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
G L++A S KM + D W+ ++ + HG E
Sbjct: 279 GSLDDAVSIFEKMRY-KDTQAWSAMIVAYANHGKAE 313
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + D +W+ +I +A+HG ++ ++ M + + ITF +L S V+
Sbjct: 291 MRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENV-QPDEITFLGLLNACSHTGRVEE 349
Query: 61 GRQIHGHIL-KFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
GR+ ++ KFG + +VD+ ++ G + DA D+LP
Sbjct: 350 GRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLP 394
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/641 (37%), Positives = 348/641 (54%), Gaps = 66/641 (10%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V +N++I + ++ +D + V+ M+ G T+ +L S + G IHG
Sbjct: 85 VFYNVMIRSYVNNHRYDDGLLVFREMVNGGF-RPDNYTYPCVLKACSCSENLRYGLLIHG 143
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+LK G +FVG+ L+ MY K G ++ E
Sbjct: 144 DVLKVGLDFNLFVGNGLIAMYGKCGCLF-------------------------------E 172
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+RR+F M KD +SW +M+ G N +A+++ REM G D T S++ A
Sbjct: 173 ARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPA--- 229
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+ N +NV Y E +F + KN++SW M
Sbjct: 230 --------------VANTSSENVL----------------YVEKIFVNLERKNLISWNVM 259
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ Y +N +AV ++ M++ +EPD T SV+ +C +L++L G + H L
Sbjct: 260 IRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKL 319
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ + N+L+ Y +CG ++D+ R+F+ M RD SWT+L+S Y G+ + LF +
Sbjct: 320 CPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTE 379
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
ML+ G PD + + +LSACS +GL+++GR YF+ M +Y I P +HY C++D+L RAG
Sbjct: 380 MLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAG 439
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
R++EA + I +MP P+ WATLLSSCR+ N++IG AA++LL+L P YVLLS+
Sbjct: 440 RVDEAYNIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSN 499
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IYA G+W V+++R M+ K +RK PG S ++ ++VH F A D S P S +IY EL
Sbjct: 500 IYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGV 559
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
L KM + GYVP+ S LHDVE +K L HSEKLAI F LL IR+ KNLRV
Sbjct: 560 LVAKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTQE-YQIRITKNLRV 618
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCH A K ISKI +REI+VRD RFH FK+G CSCGD+W
Sbjct: 619 CGDCHIAAKLISKIVEREIIVRDTNRFHHFKDGVCSCGDYW 659
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 147/318 (46%), Gaps = 23/318 (7%)
Query: 175 FTFGSVLTACGGLL-ALEEG------KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY 227
F +LT+ G L AL++ K++H I + N +G L+ Y C
Sbjct: 12 FFIQQILTSFGLLAKALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGL 71
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN 287
VF M+ +NVV + M+ Y N ++ + +F M G PD++T V+ +C+
Sbjct: 72 TRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSC 131
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
+L G HG L GL + V N L+ YGKCG + ++ R+F+EM +D VSW ++
Sbjct: 132 SENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSM 191
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYG 407
V+GYA + ++ +++ +M +G KPD T+ ++ A + E + +I V
Sbjct: 192 VAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTS-SENVLYVEKIFVNLER 250
Query: 408 IRPIHDHYTCMIDILSRAGRLEEAKSF---INKMPFPPDAIGWATLLSSC---------- 454
I + MI + + +A + K PDAI +A++L +C
Sbjct: 251 KNLI--SWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGR 308
Query: 455 RIHGNVEIGKWAAESLLE 472
RIH VE K LLE
Sbjct: 309 RIHEYVEKKKLCPNLLLE 326
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/659 (34%), Positives = 384/659 (58%), Gaps = 45/659 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + +W L++G+ + A++++ ML+ G S T +L SS + ++
Sbjct: 125 LPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAG-AYPSNYTLGIVLNACSSLQSIEF 183
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H +++K+ +G+ L Y+K R
Sbjct: 184 GKQVHAYLIKYHIDFDTSIGNSLSSFYSKF-----------------------------R 214
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
R +E + + F+ +K+KD ISWT++I+ NG ++ F +M +G+ +++T SV
Sbjct: 215 R--LEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSV 272
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+AC +L L+ G QIH+ I+ + ++ + ++++ +Y KC + A+ +F M N+
Sbjct: 273 LSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNL 332
Query: 241 VSWTAMLVGYGQ-----------NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
V+W AM+ G+ + + A+ +F + R+G++PD FT SV+S C+NL
Sbjct: 333 VTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLV 392
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
+LE+G Q HG+ + +G+++ + V ALV+ Y KCG+I+ + + F EM R +SWT++++
Sbjct: 393 ALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMIT 452
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
G+A+ G + + + LFE M G+KP++VT +GVLSACS AGL ++ +YFE+M K+Y I+
Sbjct: 453 GFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIK 512
Query: 410 PIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAES 469
P+ DH+ C+ID+ R GR+EEA ++KM F P+ W+ L++ CR HG ++G +AAE
Sbjct: 513 PVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQ 572
Query: 470 LLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSA 529
LL+L P + +YV L +++ S G+W VS++R+ M+E+ V K SWI K +V+ F
Sbjct: 573 LLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKP 632
Query: 530 DDWSSPYSDQIYAELEKLNRKMIKEGYVP--DMSSVLHDVELSEKIKMLNHHSEKLAIAF 587
+D S S ++Y LE + ++ GY P D+ + + + HSEKLAIAF
Sbjct: 633 NDKSHCQSLEMYKLLETVLNEVKALGYEPIEDVEVIEKEENEERVLSSTVLHSEKLAIAF 692
Query: 588 GLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDF 646
GLL +P PIRVVK++ +C DCHN ++IS + REI++RD+ + H F NG CSCG +
Sbjct: 693 GLLNLPTATPIRVVKSITMCRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGY 751
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 121/420 (28%), Positives = 215/420 (51%), Gaps = 49/420 (11%)
Query: 55 RRCVDL-----GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIV 109
+ C+D R IHGHI+K GF +FV + LV++Y+K G++ A + FD LP +N+
Sbjct: 72 QECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVN 131
Query: 110 MYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG 169
+WTT++TG +QN A+ LF +M G
Sbjct: 132 -------------------------------AWTTLLTGYVQNSHPLLALQLFIKMLEAG 160
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
+T G VL AC L ++E GKQ+HA++I+ + +G++L Y K + +++A
Sbjct: 161 AYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAI 220
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
F+ + K+V+SWT+++ NG + ++ F +M +G++P+++TL SV+S+C +
Sbjct: 221 KAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVML 280
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
+L+ G Q H S+ G S I + N+++ Y KCG + ++ +LF M + V+W A+++
Sbjct: 281 TLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIA 340
Query: 350 GYAKFGKANE-----------TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
G+AK E + +F+K+ G+KPD T VLS CS +E+G
Sbjct: 341 GHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQI 400
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
++K G+ T ++ + ++ G +++A +MP I W ++++ HG
Sbjct: 401 HGQIIKS-GVLADVVVGTALVSMYNKCGSIDKASKAFLEMP-SRTMISWTSMITGFARHG 458
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/652 (34%), Positives = 363/652 (55%), Gaps = 41/652 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRI-----TFSTMLIMSSSR 55
+P WN +I G++ + DA+ +Y+ M L+R+ TF +L S
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNM------QLARVSPDSFTFPHLLKACSGL 132
Query: 56 RCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
+ +GR +H + + GF + VFV + L+ +YAK + A+ F+ LP
Sbjct: 133 SHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLP----------- 181
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
+ ++ +SWT +++ QNG EA+++F +MR + D
Sbjct: 182 ------------------LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWV 223
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
SVL A L L++G+ IHA +++ + + +L MY KC + A+ +F M
Sbjct: 224 ALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKM 283
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
N++ W AM+ GY +NG + EA+ +F M + PD ++ S IS+CA + SLE+
Sbjct: 284 KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQAR 343
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
+ + + +S+AL+ + KCG++E + +F+ RD V W+A++ GY G
Sbjct: 344 SMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHG 403
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
+A E I L+ M G+ P++VT +G+L AC+ +G+V +G +F M ++ I P HY
Sbjct: 404 RAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHY 462
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
C+ID+L RAG L++A I MP P W LLS+C+ H +VE+G++AA+ L +DP
Sbjct: 463 ACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDP 522
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSP 535
N YV LS++YA+ WD V+++R M+EKG+ KD GCSW++ + R+ F D S P
Sbjct: 523 SNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHP 582
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
++I ++E + ++ + G+V + + LHD+ E + L HSE++AIA+GL+ P G
Sbjct: 583 RYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQG 642
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
P+R+ KNLR C +CH ATK ISK+ REI+VRD RFH FK+G CSCGD+W
Sbjct: 643 TPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 201/399 (50%), Gaps = 35/399 (8%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+QIH +L G F+ + L+ + G I A++ FD+LP I
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQI------------- 84
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
W +I G +N ++A+ ++ M+L ++ D FTF +L
Sbjct: 85 ------------------FPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW--KN 239
AC GL L+ G+ +HA + R +VFV + L+ +Y KC+ + A +VF + +
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT 186
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+VSWTA++ Y QNG EA++IF M++ ++PD L SV+++ L L++G H
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ GL + +L T Y KCG + + LF++M + + W A++SGYAK G A E
Sbjct: 247 SVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYARE 306
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
ID+F +M++ ++PD +++ +SAC++ G +E+ R +E V R + +I
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYE-YVGRSDYRDDVFISSALI 365
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
D+ ++ G +E A+ ++ D + W+ ++ +HG
Sbjct: 366 DMFAKCGSVEGARLVFDRT-LDRDVVVWSAMIVGYGLHG 403
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 244/675 (36%), Positives = 376/675 (55%), Gaps = 39/675 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP S+N L++G+ + + A+ ++ M L +++ ++ S RR
Sbjct: 43 MPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA-----SYNALISGLSLRR--QT 95
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+ F V + L+ Y + GL+ DA R F ++PE+N V Y ++ GLL
Sbjct: 96 LPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLD 155
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR----------LEGL 170
G V E+RRLF M D+D ++WT M++G Q G EA LF EM + G
Sbjct: 156 AGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGY 215
Query: 171 AMD-----------------QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGS 213
A + + ++ ++L +E+ ++ F +H V +
Sbjct: 216 AQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAEL--FNAMPEHP--VAACN 271
Query: 214 ALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEP 273
A++ + + + A++VF M ++ +W+AM+ Y QN EA+ F M G+ P
Sbjct: 272 AMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRP 331
Query: 274 DDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLF 333
+ ++ S+++ CA LA L+ G + H L + +AL+T Y KCGN++ + R+F
Sbjct: 332 NYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVF 391
Query: 334 NEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVE 393
+ +D V W ++++GYA+ G + + +F M G+ PD +T IG L+ACS G V+
Sbjct: 392 HTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVK 451
Query: 394 KGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+GR F M IRP +HY+CM+D+L R+G +EEA I MP PDA+ W L+ +
Sbjct: 452 EGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGA 511
Query: 454 CRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDP 513
CR+H N EI + AA+ LLEL+P N YVLLS IY S G+W+ S++R+ + + + K P
Sbjct: 512 CRMHRNAEIAEVAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSP 571
Query: 514 GCSWIKYKSRVHIFSADD-WSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEK 572
GCSWI+Y RVH+F++ D + P I LEKL+ +++ GY D S VLHD++ +K
Sbjct: 572 GCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQK 631
Query: 573 IKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVR 632
L +HSE+ A+A+GLL IP G+PIRV+KNLRVC DCH+A K I+KIT REI++RDA R
Sbjct: 632 SHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIVLRDANR 691
Query: 633 FHLFKNGECSCGDFW 647
FH FK+G CSC D+W
Sbjct: 692 FHHFKDGFCSCRDYW 706
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 186/410 (45%), Gaps = 63/410 (15%)
Query: 88 AKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMIT 147
A+ G I A+ F+ +P + YN ++ G R L + + LFR M +D S+ +I+
Sbjct: 28 ARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALIS 87
Query: 148 GL---------------------------------MQNGLEREAIDLFREMRLEGLAMDQ 174
GL +++GL +AI LF++ M +
Sbjct: 88 GLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQ-------MPE 140
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIKYAESVFR 233
S GGL L+ G+ A + ++ D +V +A++ YC+ I A ++F
Sbjct: 141 RNHVSYTVLLGGL--LDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFD 198
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISS-CANLASL 291
M +NVVSWTAM+ GY QNG A K+F M +RN + +G + + + A L
Sbjct: 199 EMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAEL 258
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
H + NA++ +G+ G ++ + +F +M RD+ +W+A++ Y
Sbjct: 259 FNAMPEHP----------VAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAY 308
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK---EYGI 408
+ E + F +ML G++P+ ++I +L+ C+ +++ GR M++ + +
Sbjct: 309 EQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDV 368
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ + +I + + G L++AK + P D + W ++++ HG
Sbjct: 369 FAV----SALITMYIKCGNLDKAKRVFHTFE-PKDIVMWNSMITGYAQHG 413
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 88/225 (39%), Gaps = 42/225 (18%)
Query: 314 NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGL- 372
NA + + GNIE + F M +R S+ AL++GY + + + LF +M S L
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 373 ----------------------------KPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
P V+ +L R GL+ F+ M +
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
H YT ++ L AGR+ EA+ ++MP D + W +LS G + G+
Sbjct: 141 RN-----HVSYTVLLGGLLDAGRVNEARRLFDEMP-DRDVVAWTAMLS-----GYCQAGR 189
Query: 465 WAAESLL--ELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREK 507
L E+ N S+ + S YA G+ + +L M E+
Sbjct: 190 ITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPER 234
>gi|326515584|dbj|BAK07038.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 594
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/623 (37%), Positives = 365/623 (58%), Gaps = 58/623 (9%)
Query: 48 MLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKN 107
ML S+ R +DLG+Q+HG+ +K+G + +G+ L +Y K
Sbjct: 1 MLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCK------------------ 42
Query: 108 IVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQ--NGLEREAIDLFREM 165
+G L GL R F+G DK+ I+WTTMI+ + N L+ + LF +M
Sbjct: 43 --------SGDLESGL-----RAFKGTPDKNVITWTTMISSCAEDENYLDL-GLSLFLDM 88
Query: 166 RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI 225
G+ ++FT SV++ CG L + GKQ+ AF + + N+ V ++ + +Y +
Sbjct: 89 LEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKGET 148
Query: 226 KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSE-----------EAVKIFCNMQRNGIEPD 274
A +F M ++++W AM+ GY Q S +A+K+F ++ R+ ++PD
Sbjct: 149 DEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRDLVRSELKPD 208
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN 334
FT S++S C+ + +LE+G Q H ++ TG +S + V++ALV Y KCG+IE + + F
Sbjct: 209 LFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFV 268
Query: 335 EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEK 394
EM R V+WT+++SGY++ G++ + I LFE M+ G +P+E+T + +LSACS AGLVE+
Sbjct: 269 EMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSACSYAGLVEE 328
Query: 395 GRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
YF++M EY I P+ DHY CM+D+ R GRL++A SFI + F P+ W++L++ C
Sbjct: 329 AERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGC 388
Query: 455 RIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREK--GVRKD 512
R HGN+E+ +AA+ LLEL P +YVLL ++Y S G+W V+++R+ + + GV +D
Sbjct: 389 RSHGNMELAFYAADRLLELKPKVIETYVLLLNMYISTGRWRDVARVRKLAKHEDVGVLRD 448
Query: 513 PGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVP--DMSSVLHDVELS 570
SWI + +V+ F ADD + P + ++Y LE L K GY P + +L D +
Sbjct: 449 R--SWIAIRDKVYFFRADDMTHPQATELYQLLENLLEKAKAVGYEPYQNAPELLFDSKEG 506
Query: 571 EKIK-------MLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQR 623
+ K ++ HHSE+LA+A GLL PPG +RV KN+ +C DCH++ KY S + R
Sbjct: 507 DDDKPAAAAGSLIKHHSERLAVALGLLETPPGATVRVTKNITMCRDCHSSIKYFSLLANR 566
Query: 624 EILVRDAVRFHLFKNGECSCGDF 646
EI+VRD+ R H FK+G CSCGDF
Sbjct: 567 EIVVRDSKRLHKFKDGRCSCGDF 589
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 186/383 (48%), Gaps = 40/383 (10%)
Query: 2 PFHDGVSWNLLISGHASHGSVND-AVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
P + ++W +IS A + D + ++ ML+ G+ + T ++++ + +R + L
Sbjct: 57 PDKNVITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMP-NEFTLTSVMSLCGARLDMSL 115
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+ K G + + V + + +Y + G +A R F+E+ +I+ +N MI+G
Sbjct: 116 GKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGY-- 173
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
++ KD L +A+ LFR++ L D FTF S+
Sbjct: 174 -------AQIMDSAKDD-----------LHARSRGFQALKLFRDLVRSELKPDLFTFSSI 215
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+ C ++ALE+G+QIHA I+ +V V SALV+MY KC SI+ A F M +
Sbjct: 216 LSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTP 275
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG------ 294
V+WT+M+ GY Q+G S++A+++F +M +G P++ T S++S+C+ +EE
Sbjct: 276 VTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSACSYAGLVEEAERYFDM 335
Query: 295 --TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGY 351
++H LV +V + + G ++D+ +E W++LV+G
Sbjct: 336 MRNEYHIEPLVDHY-------GCMVDMFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGC 388
Query: 352 AKFGKANETIDLFEKMLSHGLKP 374
G +++L LKP
Sbjct: 389 RSHGNMELAFYAADRLLE--LKP 409
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 25/138 (18%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTML-------IMSS 53
MP V+W +ISG++ HG DA++++ M+ G + ITF ++L ++
Sbjct: 270 MPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSG-ARPNEITFVSLLSACSYAGLVEE 328
Query: 54 SRRCVDLGR-QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDA-----KRGFDELPEKN 107
+ R D+ R + H L +G +VDM+ +LG + DA + GF E N
Sbjct: 329 AERYFDMMRNEYHIEPLVDHYGC-------MVDMFVRLGRLDDAFSFIKRTGF----EPN 377
Query: 108 IVMYNTMITGLLRRGLVE 125
++++++ G G +E
Sbjct: 378 EAIWSSLVAGCRSHGNME 395
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/660 (35%), Positives = 368/660 (55%), Gaps = 47/660 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + V W L++G+ + AV+V+ ML+ G S T S L SS + L
Sbjct: 41 LPRRNVVVWTTLMTGYVQNSQPEVAVEVFGDMLESG-SFPSNFTLSIALNACSSLESITL 99
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q H I+K+ +G+ L +Y+K G +
Sbjct: 100 GKQFHAFIIKYRISHDSSIGNALCSLYSKFGSL--------------------------- 132
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ S + FR +KD ISWTT+I+ NG + LF EM E + + FT SV
Sbjct: 133 ----DSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSV 188
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+ C + + + G Q+H+ + H+ N+ + ++LV +Y KC I A+++F M +KN+
Sbjct: 189 LSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNL 248
Query: 241 VSWTAMLVGYGQ-----------NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
++W AM+ G+ Q EA+ ++ + R+G +PD FTL S+++ C+ LA
Sbjct: 249 ITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLA 308
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
+LE+G Q H +++ +G +S + V ALV Y KCG+IE + + F +M+ R +SWT++++
Sbjct: 309 ALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISWTSMIT 368
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
+A+ G++ + LFE M G +P+++T +GVL+ACS AG+V++ YFEIM KEY I+
Sbjct: 369 SFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIMQKEYKIK 428
Query: 410 PIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAES 469
P+ DHY C++D+ R GRL+EA I +M P+ W L++ CR HGN E+G +AAE
Sbjct: 429 PVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEELGFYAAEQ 488
Query: 470 LLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSA 529
LL+L P + +YV+L ++Y S +W+ VS +RR M+E+ V K S I K VH F
Sbjct: 489 LLKLKPRSTETYVVLLNMYISAERWEDVSMVRRLMKEEKVGKLKDWSRISIKGEVHSFKT 548
Query: 530 DDWSSPYSDQIYAELEKLNRKMIKEGYVP-DMSSVLHDVELSEKIKMLN---HHSEKLAI 585
++ ++ +++ L L + GY + V+ D E + K + +HSEKLA+
Sbjct: 549 NNRLHNHNAELHTLLNDLVDRAKSLGYEQLENMEVIDDEEEEAEEKAFSSAVYHSEKLAV 608
Query: 586 AFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGD 645
FGLL P G PIRV+K++ +C DCH+ K +S T R I+++D R H F NG+CSC D
Sbjct: 609 TFGLLNTPIGAPIRVIKSVTMCKDCHDFMKVVSSQTTRHIIIKDGKRLHKFVNGQCSCAD 668
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 204/409 (49%), Gaps = 44/409 (10%)
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
+H H++K G FV S LV++YAK G++ +A++ FD LP +N+V++ T++TG +
Sbjct: 2 VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYV---- 57
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
QN A+++F +M G FT L A
Sbjct: 58 ---------------------------QNSQPEVAVEVFGDMLESGSFPSNFTLSIALNA 90
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C L ++ GKQ HAFII+ + +G+AL +Y K S+ + FR K+V+SW
Sbjct: 91 CSSLESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKAFRETGEKDVISW 150
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
T ++ G NG + +++F M +EP+DFTL SV+S C+ + S + G Q H S
Sbjct: 151 TTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTK 210
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK---FGKAN-- 358
G S + ++N+LV Y KCG I+++ LFN M ++ ++W A+++G+A+ K N
Sbjct: 211 LGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQAMDLAKDNFS 270
Query: 359 ------ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
E + ++ K+ G KPD TL +L+ CSR +E+G +K + +
Sbjct: 271 AQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVV 330
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
T ++D+ + G +E A+ M I W ++++S HG +
Sbjct: 331 VG-TALVDMYDKCGSIERARKAFLDMS-TRTLISWTSMITSFARHGQSQ 377
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/525 (42%), Positives = 316/525 (60%), Gaps = 1/525 (0%)
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
++ + LF + D + + TM G + A LF ++ GL D +TF S+L A
Sbjct: 71 MQHAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKA 130
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C ALEEG+Q+H I+ +NV+V L++MY C + A VF + VV++
Sbjct: 131 CASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTY 190
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
AM+ GY + EA+ +F +Q ++P D T+ SV+SSCA L +L+ G H
Sbjct: 191 NAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKK 250
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
G F+ V AL+ Y KCG+++D+ +F M VRD +W+A++ YA G + + L
Sbjct: 251 NGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSL 310
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F++M G +PDE+T +G+L ACS GLVE+G YF M +YG+ P HY CM+D+L
Sbjct: 311 FKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLG 370
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
RAGRLEEA FI +P P I W TLLS+C HGNVE+GK E + ELD + Y++
Sbjct: 371 RAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYII 430
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LS++ A G+W+ V+ +R+ M E+GV K PGCS ++ + VH F + D S +++
Sbjct: 431 LSNLCARAGRWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQA 490
Query: 544 LEKLNRKMIKEGYVPDMSSVLH-DVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVK 602
L++L +++ GYVP+ S V H D+E EK L +HSEKLAI FGLL PPG IRVVK
Sbjct: 491 LDELVKELKLVGYVPNTSLVFHADMEDEEKEVTLRYHSEKLAITFGLLNTPPGTTIRVVK 550
Query: 603 NLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
NLRVC DCH+A K IS I R+I++RD RFH FK+G+CSC D+W
Sbjct: 551 NLRVCGDCHSAAKLISLIFDRQIILRDVQRFHHFKDGKCSCEDYW 595
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 197/417 (47%), Gaps = 44/417 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D V +N + G+A + A ++ +L GL TF ++L +S + ++
Sbjct: 81 IPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFP-DDYTFPSLLKACASCKALEE 139
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H +K G V+V L++MY + A+R FD++ E +V YN
Sbjct: 140 GRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNA------- 192
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
MITG + EA+ LFRE++ L T SV
Sbjct: 193 ------------------------MITGYARGSRPNEALSLFRELQARNLKPTDVTMLSV 228
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L++C L AL+ GK +H ++ +N V V +AL+DMY KC S+ A VF MA ++
Sbjct: 229 LSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDT 288
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
+W+AM++ Y +G +AV +F M++ G EPD+ T ++ +C++ +EEG + F+G
Sbjct: 289 QAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYG 348
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD-EVSWTALVSGYAKFGKAN 358
G+I I +V G+ G +E+++ + +R + W L+S G
Sbjct: 349 MRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVE 408
Query: 359 ETIDLFEKML----SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
+ E++ SHG D + L + C+RAG E +Y ++ E G+ I
Sbjct: 409 LGKRVIEQIFELDDSHG--GDYIILSNL---CARAGRWED-VNYVRKLMNERGVVKI 459
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 150/285 (52%), Gaps = 10/285 (3%)
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK----CKSIKYAESVFRT 234
S+L C +L E KQ+ AF I+ ++ V + ++ +C S+++A +F
Sbjct: 25 SLLPKCT---SLRELKQLQAFAIKTHLHSDLSVLTKFIN-FCSLNPTTTSMQHAHHLFDQ 80
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
+ ++V + M GY + A +F + +G+ PDD+T S++ +CA+ +LEEG
Sbjct: 81 IPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEG 140
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
Q H ++ GL + V L+ Y C ++ + R+F+++ V++ A+++GYA+
Sbjct: 141 RQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARG 200
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
+ NE + LF ++ + LKP +VT++ VLS+C+ G ++ G+ E VK+ G
Sbjct: 201 SRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHE-YVKKNGFNRFVKV 259
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
T +ID+ ++ G L++A M D W+ ++ + IHG+
Sbjct: 260 DTALIDMYAKCGSLDDAVCVFENMAV-RDTQAWSAMIMAYAIHGH 303
>gi|357519251|ref|XP_003629914.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523936|gb|AET04390.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/572 (38%), Positives = 343/572 (59%), Gaps = 5/572 (0%)
Query: 81 SPLVDMYAKLGLIYDAKRGFDELP--EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKD 138
+ ++ + G + +A+R F+ +P +K++ +N M+ G G V ++ RLF M +D
Sbjct: 156 TTIIHGFLSTGRVNEAERFFNAMPYVDKDVATWNAMVNGYCNNGRVNDALRLFCQMPSRD 215
Query: 139 SISWTTMITGLMQNGLEREAIDLFREMR-LEGLAMDQFTFGSVLTACGGLLALEEGKQIH 197
ISWT++I GL +NG +A+ F+ M G+ + T L+A +L G QIH
Sbjct: 216 VISWTSIIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTLVCGLSAAAKILDFYAGIQIH 275
Query: 198 AFIIRNDHKDNV--FVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGC 255
+ + + FV ++LV Y CK + A VF KNVV WTA+L G G N
Sbjct: 276 CCMFKFGFCCGLDEFVSASLVTFYASCKRMGDACKVFGETVCKNVVVWTALLTGCGLNDK 335
Query: 256 SEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNA 315
EA+++F M R + P++ + S ++SC L LE+G H + GL + + N+
Sbjct: 336 HVEALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKMGLENAVYTGNS 395
Query: 316 LVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPD 375
LV Y KCG I D+ +F + ++ VSW +++ G A+ G + LF++ML G++ D
Sbjct: 396 LVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLFKEMLREGVESD 455
Query: 376 EVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFI 435
E+TL G+LSACSR+G+++K R +F ++ ++ +HY CM+D+L R G +EEA++
Sbjct: 456 EITLTGLLSACSRSGMLQKARCFFGYFARKRSMKLTVEHYACMVDVLGRCGEVEEAEALA 515
Query: 436 NKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWD 495
MP +++ W LLS+CR+H ++++ + AA+ + E++P A+YVLLS++YAS +W
Sbjct: 516 TSMPVEANSMVWLVLLSACRVHSSLDVAERAAKRIFEMEPDCSAAYVLLSNLYASSRRWL 575
Query: 496 HVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEG 555
V+++R M+ G+ K PG SWI K H F + D S P +++IY +L L K+ + G
Sbjct: 576 EVARIRMKMKHNGIVKQPGSSWITLKGMRHEFLSADRSHPLTEEIYEKLVWLGVKLRELG 635
Query: 556 YVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATK 615
Y+PD LHDVE+ + +ML++HSE+LAIAFGLL G I ++KNLRVC DCH A
Sbjct: 636 YIPDQQFALHDVEIEQNEEMLSYHSERLAIAFGLLSTVEGSTITIMKNLRVCGDCHTAIT 695
Query: 616 YISKITQREILVRDAVRFHLFKNGECSCGDFW 647
++KI REI+VRD+ RFH FKNG CSCGD+W
Sbjct: 696 LMAKIVNREIVVRDSSRFHHFKNGICSCGDYW 727
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 196/407 (48%), Gaps = 80/407 (19%)
Query: 1 MPF--HDGVSWNLLISGHASHGSVNDAVKVYNLM-------------------------- 32
MP+ D +WN +++G+ ++G VNDA++++ M
Sbjct: 178 MPYVDKDVATWNAMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVGLDRNGKSYQALF 237
Query: 33 -LKDGLGNLSRITFSTMLI--MSSSRRCVDL--GRQIHGHILKFGF--GSYVFVGSPLVD 85
K+ +G ST L+ +S++ + +D G QIH + KFGF G FV + LV
Sbjct: 238 FFKNMVGFSGVGISSTTLVCGLSAAAKILDFYAGIQIHCCMFKFGFCCGLDEFVSASLVT 297
Query: 86 MYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTM 145
YA + DA + F E KN+V++ ++TG G+ DK
Sbjct: 298 FYASCKRMGDACKVFGETVCKNVVVWTALLTGC--------------GLNDK-------- 335
Query: 146 ITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH 205
EA+++F EM + ++ +F S L +C GL LE+G+ IHA I+
Sbjct: 336 ---------HVEALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKMGL 386
Query: 206 KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCN 265
++ V+ G++LV MY KC I A VF+ + KNVVSW +++VG Q+GC A+ +F
Sbjct: 387 ENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLFKE 446
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG-----RSLVTGLISFITVSNALVTFY 320
M R G+E D+ TL ++S+C+ L++ F G RS+ + + + + L
Sbjct: 447 MLREGVESDEITLTGLLSACSRSGMLQKARCFFGYFARKRSMKLTVEHYACMVDVL---- 502
Query: 321 GKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKANETIDLFEK 366
G+CG +E++ L M V + + W L+S + + ++D+ E+
Sbjct: 503 GRCGEVEEAEALATSMPVEANSMVWLVLLSA----CRVHSSLDVAER 545
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 191/443 (43%), Gaps = 62/443 (13%)
Query: 42 RITFSTMLIMSSSRRCVDLGRQIHGHI--LKFGFGSYVF--VGSPLVDMYAKLGLIY--- 94
R T T LI + L H+ K VF + SP V +Y KL L Y
Sbjct: 42 RTTPFTTLIQNPKSSSTSLNFTFLNHLKNQKLDSARAVFNKIPSPHVSLYTKLLLAYAHN 101
Query: 95 ----DAKRGFDELPE--KNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITG 148
+A F+++P K+ + +N++I + + +LF M ++SISWTT+I G
Sbjct: 102 NNLHEAINLFNQIPSNTKDTISWNSVIKASIICNDFVTAVKLFDEMPQRNSISWTTIIHG 161
Query: 149 LMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDN 208
+ G EA F M +D+ +
Sbjct: 162 FLSTGRVNEAERFFNAMPY----VDK---------------------------------D 184
Query: 209 VFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR 268
V +A+V+ YC + A +F M ++V+SWT+++VG +NG S +A+ F NM
Sbjct: 185 VATWNAMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVGLDRNGKSYQALFFFKNMVG 244
Query: 269 -NGIEPDDFTLGSVISSCANLASLEEGTQFH----GRSLVTGLISFITVSNALVTFYGKC 323
+G+ TL +S+ A + G Q H GL F++ S LVTFY C
Sbjct: 245 FSGVGISSTTLVCGLSAAAKILDFYAGIQIHCCMFKFGFCCGLDEFVSAS--LVTFYASC 302
Query: 324 GNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVL 383
+ D+ ++F E ++ V WTAL++G K E +++F +M+ + P+E + L
Sbjct: 303 KRMGDACKVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNVVPNESSFTSAL 362
Query: 384 SACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPD 443
++C +EKGR +K G+ ++ + S+ G + +A + K +
Sbjct: 363 NSCVGLEDLEKGRVIHAAGIK-MGLENAVYTGNSLVVMYSKCGFIGDALC-VFKGICEKN 420
Query: 444 AIGWATLLSSCRIHGNVEIGKWA 466
+ W +++ C HG G WA
Sbjct: 421 VVSWNSVIVGCAQHG---CGTWA 440
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 243/603 (40%), Positives = 344/603 (57%), Gaps = 59/603 (9%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRG--------------FDELPEK 106
G H H+LK G GS FV + ++DMYA+ ++A FD +PE+
Sbjct: 44 GIGFHAHVLKLGHGSDAFVRNAVIDMYARKVADWNAMVSGYWKWESEGQAQWLFDVMPER 103
Query: 107 NIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR 166
N++ + M+TG + +E +RR F M ++ +SW M++G QNGL EA+ LF EM
Sbjct: 104 NVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEM- 162
Query: 167 LEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIK 226
+ A+ N +A++ Y + +
Sbjct: 163 -----------------------------LGAY-------RNSVTWNAMISAYMRVGDLD 186
Query: 227 YAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSC 285
A +F TM +NVV+W +M+ GY QNG S A+++F M + PD+ T+ SVIS+C
Sbjct: 187 SARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISAC 246
Query: 286 ANLASLEEGTQFHGRSLVTGLISF-ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
+L +LE G + R L I I+ NA++ Y +CG++ED+ R+F EM RD VS+
Sbjct: 247 GHLGALELG-NWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSY 305
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
L+SG+A G E I+L M G++PD VT IGVL+ACS AGL+E+GR FE +K
Sbjct: 306 NTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFE-SIK 364
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
+ P DHY CM+D+L R G LE+AK + +MP P A + +LL++ RIH VE+G+
Sbjct: 365 D----PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGE 420
Query: 465 WAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRV 524
AA L EL+P N +++LLS+IYAS G+W V ++R M++ GV+K G SW++Y ++
Sbjct: 421 LAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKL 480
Query: 525 HIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLA 584
H F D S SD IY L +L +KM + GY+ D S VL DVE EK +++ HSEKLA
Sbjct: 481 HKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLA 540
Query: 585 IAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCG 644
I + LL G IRVVKNLRVC DCH A K ISK+ R I+VRD RFH F +G CSC
Sbjct: 541 ICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCK 600
Query: 645 DFW 647
D+W
Sbjct: 601 DYW 603
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 178/331 (53%), Gaps = 16/331 (4%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN ++SG+ S A ++++M + + IT++ M+ + + ++ R+ +
Sbjct: 77 WNAMVSGYWKWESEGQAQWLFDVMPERNV-----ITWTAMVTGYAKVKDLEAARRYFDCM 131
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL--PEKNIVMYNTMITGLLRRGLVEE 126
+ S+ + ++ YA+ GL +A R FDE+ +N V +N MI+ +R G ++
Sbjct: 132 PERSVVSW----NAMLSGYAQNGLAEEALRLFDEMLGAYRNSVTWNAMISAYMRVGDLDS 187
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAMDQFTFGSVLTACG 185
+R+LF M ++ ++W +MI G QNG AI+LF+EM + L D+ T SV++ACG
Sbjct: 188 ARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACG 247
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
L ALE G + F+ N K ++ +A++ MY +C S++ A+ VF+ MA ++VVS+
Sbjct: 248 HLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNT 307
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
++ G+ +G EA+ + M+ GIEPD T V+++C++ LEEG + S+
Sbjct: 308 LISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVF-ESIKDP 366
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
I +V G+ G +ED+ R M
Sbjct: 367 AIDHYA---CMVDLLGRVGELEDAKRTMERM 394
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 31/196 (15%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+WN +I+G+A +G A++++ M+ +T +++ ++L
Sbjct: 195 MPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALEL 254
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G + + + + + ++ MY++ G + DAKR F E+ +++V YNT+I+G
Sbjct: 255 GNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAA 314
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G +G+ EAI+L M+ G+ D+ TF V
Sbjct: 315 HG-----------------------------HGV--EAINLMSTMKEGGIEPDRVTFIGV 343
Query: 181 LTACGGLLALEEGKQI 196
LTAC LEEG+++
Sbjct: 344 LTACSHAGLLEEGRKV 359
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 6/118 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VS+N LISG A+HG +A+ + + M + G+ R+TF +L S ++
Sbjct: 297 MATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGI-EPDRVTFIGVLTACSHAGLLEE 355
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITG 117
GR++ I Y + +VD+ ++G + DAKR + +P E + +Y +++
Sbjct: 356 GRKVFESIKDPAIDHY----ACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNA 409
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/647 (36%), Positives = 367/647 (56%), Gaps = 33/647 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D +SWN +ISG S+G + A++++ M +G L T ++L + + L
Sbjct: 257 MPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEG-EELDSATLLSVLPACAELHLLFL 315
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +HG+ +K GF S + + L+DMY+ + F + +KN+V + MIT R
Sbjct: 316 GRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTR 375
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL ++ + G LF+EM LEG D F S
Sbjct: 376 AGLYDK-------------------VAG------------LFQEMGLEGTRPDIFAITSA 404
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A G L+ GK +H + IRN + + V +AL++MY KC +++ A+ +F + K++
Sbjct: 405 LHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDM 464
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SW ++ GY +N + EA +F M + P+ T+ ++ + A+L+SLE G + H
Sbjct: 465 ISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASLSSLERGREMHAY 523
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+L G + V+NAL+ Y KCG + + RLF+ ++ ++ +SWT +V+GY G+ +
Sbjct: 524 ALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDA 583
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
I LFE+M G+ PD + +L ACS +GL ++G +F+ M KE+ I P HYTCM+D
Sbjct: 584 IALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVD 643
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L G L+EA FI+ MP PD+ W +LL CRIH NV++ + AE + EL+P N
Sbjct: 644 LLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFELEPENTGY 703
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLL++IYA +W+ V +L+ + +G+R++ GCSWI+ K +VH+F AD+ + P +I
Sbjct: 704 YVLLANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWIEAKGKVHVFIADNRNHPQGTRI 763
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
L ++ ++M +EG+ P L + + + L HS KLA+AFG+L + G IRV
Sbjct: 764 AEFLNEVAKRMQEEGHDPKKKYALMGADNAVHGEALCGHSSKLAVAFGVLNLSEGRLIRV 823
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KN RVCS CH A K+ISK+ REI++RD+ RFH F+ G CSC +W
Sbjct: 824 TKNSRVCSHCHEAAKFISKMCSREIILRDSNRFHHFEQGRCSCRGYW 870
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 134/454 (29%), Positives = 220/454 (48%), Gaps = 43/454 (9%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
W L+SG+A G + + V ++ M G+ T S +L + ++ G +HG +
Sbjct: 164 WTALMSGYAKAGDLREGVLLFRKMHCCGV-RPDAYTISCVLKCIAGLGSIEDGEVVHGLL 222
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
K GFGS VG+ L+ YAK DA FD +P ++++ +N+MI
Sbjct: 223 EKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMI------------- 269
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
+G NGL +AI+LF M LEG +D T SVL AC L
Sbjct: 270 ------------------SGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELH 311
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
L G+ +H + ++ + + L+DMY C + +FR M KNVVSWTAM+
Sbjct: 312 LLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMIT 371
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
Y + G ++ +F M G PD F + S + + A L+ G HG ++ G+
Sbjct: 372 SYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEK 431
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
+ V+NAL+ Y KCGN+E++ +F+ + +D +SW L+ GY++ ANE LF +ML
Sbjct: 432 VLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEML 491
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP--IHDHY--TCMIDILSR 424
L+P+ VT+ +L A + +E+GR + Y +R + D + +ID+ +
Sbjct: 492 LQ-LRPNAVTMTCILPAAASLSSLERGRE-----MHAYALRRGYLEDDFVANALIDMYVK 545
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
G L A+ +++ + I W +++ +HG
Sbjct: 546 CGALLLARRLFDRLS-NKNLISWTIMVAGYGMHG 578
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 138/502 (27%), Positives = 233/502 (46%), Gaps = 48/502 (9%)
Query: 10 NLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHIL 69
NL I G + +A+ L+ DG+ + S + +L + S R ++ G++ H +
Sbjct: 65 NLHIQRLCRSGDLEEAL---GLLGSDGVDDRS---YGAVLQLCSEVRSLEGGKRAHFLVR 118
Query: 70 KFGFGSYVF---VGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
G +G LV MY K G + +A+R FDE+P+ +
Sbjct: 119 ASSLGRDGMDNVLGQKLVLMYLKCGDLENARRVFDEMPQVS------------------- 159
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
D WT +++G + G RE + LFR+M G+ D +T VL G
Sbjct: 160 -----------DVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAG 208
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L ++E+G+ +H + + VG+AL+ Y K K A VF M ++V+SW +M
Sbjct: 209 LGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSM 268
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ G NG ++A+++F M G E D TL SV+ +CA L L G HG S+ TG
Sbjct: 269 ISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGF 328
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
IS +++N L+ Y C + ++++F M ++ VSWTA+++ Y + G ++ LF++
Sbjct: 329 ISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQE 388
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M G +PD + L A + L++ G+ ++ G+ + ++++ + G
Sbjct: 389 MGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRN-GMEKVLAVTNALMEMYVKCG 447
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSS-CRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
+EEAK + + D I W TL+ R + E E LL+L P N + +
Sbjct: 448 NMEEAKLIFDGV-VSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQLRP-NAVTMTCIL 505
Query: 486 SIYAS-----KGKWDHVSQLRR 502
AS +G+ H LRR
Sbjct: 506 PAAASLSSLERGREMHAYALRR 527
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/627 (37%), Positives = 362/627 (57%), Gaps = 35/627 (5%)
Query: 55 RRCVDLGRQIHGHILKFGFGSYV-FVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNT 113
R V L + +H + S V V +P++ MY +LGL DA+R FD++P K+ V + T
Sbjct: 117 RAHVLLCQMLHAACFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTT 176
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
+I+GL + GL++++ L R ++ ISWT +I+G + G EA+D F M +G+ D
Sbjct: 177 VISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPD 236
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF- 232
+ T +L+AC L L G+ +H + + + AL+DMY KC I A VF
Sbjct: 237 EVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFD 296
Query: 233 ------RTMAW-------------------------KNVVSWTAMLVGYGQNGCSEEAVK 261
R +W +++V++ +++ GY G EA+
Sbjct: 297 ALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALL 356
Query: 262 IFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF-ITVSNALVTFY 320
+F M+R+ + D+FT+ S++++CA+L +L +G H + L+ I + AL+ Y
Sbjct: 357 LFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHA-CIEQRLVEVDIYLGTALLDMY 415
Query: 321 GKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLI 380
KCG +E++ +F M+VRD +W+A+++G A G ++ F M G +P+ VT I
Sbjct: 416 LKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYI 475
Query: 381 GVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF 440
+L+ACS + L+++GR YFE M + IRP+ +HY CMID+L R+G L+EA + MP
Sbjct: 476 AILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPM 535
Query: 441 PPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQL 500
P+A+ WA++LS+CR+H + + + AAE LL+L+P A YV L +IY +W+ SQ+
Sbjct: 536 QPNAVIWASILSACRVHKDANLARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQWEDASQI 595
Query: 501 RRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDM 560
RR M E+GV+K G S I +VH F D + P +I A +E++ R++ GY P
Sbjct: 596 RRLMEERGVKKAAGYSSITVAGQVHKFIVCDRTHPQIMEITAMMEEITRRLKSVGYSPIT 655
Query: 561 SSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKI 620
S + DV+ EK L HSEK+AIAFGL+ + P LP+ ++KNLRVC DCH+A K IS+I
Sbjct: 656 SQITVDVDEEEKEHALLAHSEKIAIAFGLISLAPNLPLHIIKNLRVCEDCHSAIKLISRI 715
Query: 621 TQREILVRDAVRFHLFKNGECSCGDFW 647
REI+VRD RFH F++G CSC DFW
Sbjct: 716 WNREIIVRDRSRFHHFRDGTCSCNDFW 742
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 119/378 (31%), Positives = 205/378 (54%), Gaps = 6/378 (1%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P + +SW LISG++ G +AV +N ML DG+ +T +L + + + G
Sbjct: 198 PARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGI-EPDEVTVIGLLSACAQLKDLVFG 256
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPE-KNIVMYNTMITGLLR 120
R +H + + G + L+DMYAK G I A FD L + +N MI G +
Sbjct: 257 RSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCK 316
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G V+ +R LF M+D+D +++ ++ITG + G REA+ LF +MR L D FT S+
Sbjct: 317 LGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSL 376
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LTAC L AL +G+ +HA I + + ++++G+AL+DMY KC ++ A VF+ M+ ++V
Sbjct: 377 LTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDV 436
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQFHG 299
+W+AM+ G NG + A++ F M+ +G +P+ T +++++C++ L+EG F
Sbjct: 437 HTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEE 496
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKAN 358
L+ + I ++ G+ G ++++ L M ++ + V W +++S AN
Sbjct: 497 MRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILSACRVHKDAN 556
Query: 359 ETIDLFEKMLSHGLKPDE 376
+ E +L L+PDE
Sbjct: 557 LARNAAEHLLK--LEPDE 572
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 170/396 (42%), Gaps = 72/396 (18%)
Query: 161 LFREMRLEGLAMDQFTFGSVLTACG-GLLALEEGKQIHAFIIRNDHKDNV-FVGSALVDM 218
L+R MR G+ D FTF + C G + + +HA R V V + ++ M
Sbjct: 90 LYRRMRRTGVCTDAFTFHFLFKCCARGRAHVLLCQMLHAACFRTMLPSAVPLVSNPIIHM 149
Query: 219 YCKCKSIKYAESVF------RTMAW-------------------------KNVVSWTAML 247
Y + A F +AW +NV+SWT ++
Sbjct: 150 YVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLI 209
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
GY + G + EAV F +M +GIEPD+ T+ ++S+CA L L G H G++
Sbjct: 210 SGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGML 269
Query: 308 SFITVSNALVTFYGKCGNI--------------------------------EDSHRLFNE 335
+ AL+ Y KCG+I + + LF++
Sbjct: 270 MSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQ 329
Query: 336 MNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG 395
M RD V++ +L++GY G+ E + LF +M H L+ D T++ +L+AC+ G + +G
Sbjct: 330 MEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQG 389
Query: 396 RHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCR 455
R + + I+ T ++D+ + GR+EEA M D W+ +++
Sbjct: 390 RALHACIEQRLVEVDIYLG-TALLDMYLKCGRVEEASLVFQAMSV-RDVHTWSAMIAGLA 447
Query: 456 IHGNVEIGKWAAESL--LELDPYNPASYVLLSSIYA 489
+G +GK A E +++D + P S ++ + A
Sbjct: 448 FNG---MGKAALEYFFWMKVDGFQPNSVTYIAILTA 480
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 160/364 (43%), Gaps = 45/364 (12%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS------IKYAESVFRTMAWKNVVS 242
++ + ++HA ++ + + S L++ C + ++YA +F M +
Sbjct: 11 SVRQAAELHAVLVASGRLLHPPSASHLLNSLVNCFTPTDPLHLRYALCLFDRMPCSTFLF 70
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN-LASLEEGTQFHGRS 301
TA+ + + E + ++ M+R G+ D FT + CA A + H
Sbjct: 71 DTALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRAHVLLCQMLHAAC 130
Query: 302 LVTGLISFIT-VSNALVTFYGKCGNIEDSHRLFNEMNVRDEV------------------ 342
T L S + VSN ++ Y + G D+ R F+++ V+D V
Sbjct: 131 FRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDDA 190
Query: 343 -------------SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
SWT L+SGY++ G+A E +D F MLS G++PDEVT+IG+LSAC++
Sbjct: 191 WCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQL 250
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
+ GR + +V E G+ +ID+ ++ G + A + + W
Sbjct: 251 KDLVFGRSLHK-LVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNA 309
Query: 450 LLSS-CRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
++ C++ G+V++ ++ + +++ + ++ L + Y G+ L MR
Sbjct: 310 MIDGYCKL-GHVDVARYLFD---QMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHD 365
Query: 509 VRKD 512
+R D
Sbjct: 366 LRAD 369
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/641 (36%), Positives = 364/641 (56%), Gaps = 36/641 (5%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
+N LI+G ++ ++ + ++ + K GL L TF +L + LG +H +
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKHGL-YLHGFTFPLVLKACTRASSRKLGIDLHSLV 137
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+K GF V + L+ +Y+ G + DA + FDE+P++++
Sbjct: 138 VKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSV-------------------- 177
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
++WT + +G +G REAIDLF++M G+ D + VL+AC +
Sbjct: 178 -----------VTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVG 226
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
L+ G+ I ++ + + N FV + LV++Y KC ++ A SVF +M K++V+W+ M+
Sbjct: 227 DLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQ 286
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT--GL 306
GY N +E +++F M + ++PD F++ +SSCA+L +L+ G G SL+
Sbjct: 287 GYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEW--GISLIDRHEF 344
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
++ + ++NAL+ Y KCG + +F EM +D V A +SG AK G + +F +
Sbjct: 345 LTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQ 404
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
G+ PD T +G+L C AGL++ G +F + Y ++ +HY CM+D+ RAG
Sbjct: 405 TEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAG 464
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
L++A I MP P+AI W LLS CR+ + ++ + + L+ L+P+N +YV LS+
Sbjct: 465 MLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSN 524
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IY+ G+WD +++R M +KG++K PG SWI+ + +VH F ADD S P SD+IYA+LE
Sbjct: 525 IYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLED 584
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
L +M G+VP V DVE EK ++L +HSEKLA+A GL+ G IRVVKNLRV
Sbjct: 585 LGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRV 644
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCH K ISKIT+REI+VRD RFH F NG CSC D+W
Sbjct: 645 CGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 164/337 (48%), Gaps = 21/337 (6%)
Query: 114 MITGLLRRGL----VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG 169
++ LL+R L + S LF + + + ++I G + N L E +DLF +R G
Sbjct: 47 LVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHG 106
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
L + FTF VL AC + + G +H+ +++ +V ++L+ +Y + A
Sbjct: 107 LYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAH 166
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
+F + ++VV+WTA+ GY +G EA+ +F M G++PD + + V+S+C ++
Sbjct: 167 KLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVG 226
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
L+ G + V LV Y KCG +E + +F+ M +D V+W+ ++
Sbjct: 227 DLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQ 286
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
GYA E I+LF +ML LKPD+ +++G LS+C+ G ++ G E+GI
Sbjct: 287 GYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLG---------EWGIS 337
Query: 410 PIHDH--------YTCMIDILSRAGRLEEAKSFINKM 438
I H +ID+ ++ G + +M
Sbjct: 338 LIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM 374
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 175/354 (49%), Gaps = 38/354 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P V+W L SG+ + G +A+ ++ M++ G+ S + + ++S+ DL
Sbjct: 172 IPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDS---YFIVQVLSACVHVGDL 228
Query: 61 --GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G I ++ + FV + LV++YAK G +
Sbjct: 229 DSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKM------------------------- 263
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
E++R +F M +KD ++W+TMI G N +E I+LF +M E L DQF+
Sbjct: 264 ------EKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIV 317
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
L++C L AL+ G+ + I R++ N+F+ +AL+DMY KC ++ VF+ M K
Sbjct: 318 GFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEK 377
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-F 297
++V A + G +NG + + +F ++ GI PD T ++ C + +++G + F
Sbjct: 378 DIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFF 437
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
+ S V L + +V +G+ G ++D++RL +M +R + + W AL+SG
Sbjct: 438 NAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 165/352 (46%), Gaps = 38/352 (10%)
Query: 194 KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQN 253
KQIH +I + + F+ + L+ + KY+ +F + N+ + +++ G+ N
Sbjct: 30 KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNN 89
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVS 313
E + +F +++++G+ FT V+ +C +S + G H + G +
Sbjct: 90 HLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAM 149
Query: 314 NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLK 373
+L++ Y G + D+H+LF+E+ R V+WTAL SGY G+ E IDLF+KM+ G+K
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVK 209
Query: 374 PDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKS 433
PD ++ VLSAC G ++ G + M +E ++ T ++++ ++ G++E+A+S
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKYM-EEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268
Query: 434 FINKM------------------PFP----------------PDAIGWATLLSSCRIHGN 459
+ M FP PD LSSC G
Sbjct: 269 VFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGA 328
Query: 460 VEIGKWAAESLLELDPYNPASYV--LLSSIYASKGKWDHVSQLRRTMREKGV 509
+++G+W SL++ + ++ L +YA G ++ + M+EK +
Sbjct: 329 LDLGEWGI-SLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDI 379
>gi|302780908|ref|XP_002972228.1| hypothetical protein SELMODRAFT_97343 [Selaginella moellendorffii]
gi|300159695|gb|EFJ26314.1| hypothetical protein SELMODRAFT_97343 [Selaginella moellendorffii]
Length = 487
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/488 (45%), Positives = 311/488 (63%), Gaps = 6/488 (1%)
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLA-LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
M+ EG+ D+ F + L ACGG LA L GK IH+ ++ + N V +ALV+MY K
Sbjct: 1 MQQEGVLPDKICFVATLNACGGALADLRLGKLIHSCVLEAGLESNTVVATALVNMYGKAG 60
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE---PDDFTLGS 280
+ A VFR + K++VSWTA++ Y + EA+++F M +G++ PD
Sbjct: 61 CLDEATRVFRGLERKDLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAF 120
Query: 281 VISSCANLASLEEGTQFHGRSLVTGLISFITVSN-ALVTFYGKCGNIEDSHRLFNEMNVR 339
++ +CA L++ EG H R G S V ++ YGKCGN+ +H +F+ M+ R
Sbjct: 121 LLQACATLSAAAEGRLAHRRIQECGYDSSDGVLGLGIINMYGKCGNLRAAHEVFDGMSER 180
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
D V+WT ++SGYA G + E++ +F +M G KPD V+L+ VLS CS AGLVE+G +F
Sbjct: 181 DTVAWTTIISGYAHHGHSEESLLMFWRMQQDGSKPDGVSLLCVLSVCSHAGLVEQGWDFF 240
Query: 400 EIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+ KE+G+ P HY CMID+L R+G LE A+ I +MPF A+ WA L++C++H +
Sbjct: 241 LDITKEFGVEPGEKHYGCMIDLLGRSGDLEAAEVMIRRMPFQATAMNWAIFLAACKVHSD 300
Query: 460 VEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIK 519
E GK AAE +LEL+P PA+YV LS+IYA+ G+WD V ++R M+ G++KDPG S I+
Sbjct: 301 TERGKRAAEKVLELEPV-PAAYVSLSNIYAAAGEWDQVDRVRSAMKAMGLQKDPGRSSIE 359
Query: 520 YKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHH 579
SRVH F A D S P + +IY LE L R+M GYVPD VL +V +K ++L H
Sbjct: 360 VNSRVHEFWAGDKSHPRAAEIYGLLESLTRQMEGSGYVPDTKLVLLNVSEEQKERLLCFH 419
Query: 580 SEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNG 639
SEKLAIAFGLL P G +R++KNLRVC DCH A K++S+I REI +RD+ RFH F++G
Sbjct: 420 SEKLAIAFGLLSTPAGSSLRIIKNLRVCGDCHTAAKFVSRIAGREIFMRDSQRFHHFQDG 479
Query: 640 ECSCGDFW 647
CSCGD+W
Sbjct: 480 HCSCGDYW 487
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 127/243 (52%), Gaps = 37/243 (15%)
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
LG+ IH +L+ G S V + LV+MY K G +
Sbjct: 29 LGKLIHSCVLEAGLESNTVVATALVNMYGKAGCL-------------------------- 62
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL---AMDQFT 176
+E+ R+FRG++ KD +SWT +++ + L REA+ LFREM L GL D+
Sbjct: 63 -----DEATRVFRGLERKDLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSY 117
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIR--NDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
F +L AC L A EG+ H I D D V +G +++MY KC +++ A VF
Sbjct: 118 FAFLLQACATLSAAAEGRLAHRRIQECGYDSSDGV-LGLGIINMYGKCGNLRAAHEVFDG 176
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
M+ ++ V+WT ++ GY +G SEE++ +F MQ++G +PD +L V+S C++ +E+G
Sbjct: 177 MSERDTVAWTTIISGYAHHGHSEESLLMFWRMQQDGSKPDGVSLLCVLSVCSHAGLVEQG 236
Query: 295 TQF 297
F
Sbjct: 237 WDF 239
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 7/171 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNL--SRITFSTMLIMSSSRRCVDLGR 62
D VSW L+S ++ +A++++ M GL R F+ +L ++ GR
Sbjct: 76 DLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAFLLQACATLSAAAEGR 135
Query: 63 QIHGHILKFGFGSYVFV-GSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
H I + G+ S V G +++MY K G + A FD + E++ V + T+I+G
Sbjct: 136 LAHRRIQECGYDSSDGVLGLGIINMYGKCGNLRAAHEVFDGMSERDTVAWTTIISGYAHH 195
Query: 122 GLVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLE 168
G EES +F M+ D +S +++ GL + D F ++ E
Sbjct: 196 GHSEESLLMFWRMQQDGSKPDGVSLLCVLSVCSHAGLVEQGWDFFLDITKE 246
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/659 (34%), Positives = 384/659 (58%), Gaps = 45/659 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + +W L++G+ + A++++ ML+ G S T +L SS + ++
Sbjct: 119 LPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAG-AYPSNYTLGIVLNACSSLQSIEF 177
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H +++K+ +G+ L Y+K R
Sbjct: 178 GKQVHAYLIKYHIDFDTSIGNSLSSFYSKF-----------------------------R 208
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
R +E + + F+ +K+KD ISWT++I+ NG ++ F +M +G+ +++T SV
Sbjct: 209 R--LEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSV 266
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+AC +L L+ G QIH+ I+ + ++ + ++++ +Y KC + A+ +F M N+
Sbjct: 267 LSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNL 326
Query: 241 VSWTAMLVGYGQ-----------NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
V+W AM+ G+ + + A+ +F + R+G++PD FT SV+S C+NL
Sbjct: 327 VTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLV 386
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
+LE+G Q HG+ + +G+++ + V ALV+ Y KCG+I+ + + F EM R +SWT++++
Sbjct: 387 ALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMIT 446
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
G+A+ G + + + LFE M G+KP++VT +GVLSACS AGL ++ +YFE+M K+Y I+
Sbjct: 447 GFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIK 506
Query: 410 PIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAES 469
P+ DH+ C+ID+ R GR+EEA ++KM F P+ W+ L++ CR HG ++G +AAE
Sbjct: 507 PVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQ 566
Query: 470 LLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSA 529
LL+L P + +YV L +++ S G+W VS++R+ M+E+ V K SWI K +V+ F
Sbjct: 567 LLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKP 626
Query: 530 DDWSSPYSDQIYAELEKLNRKMIKEGYVP--DMSSVLHDVELSEKIKMLNHHSEKLAIAF 587
+D S S ++Y LE + ++ GY P D+ + + + HSEKLAIAF
Sbjct: 627 NDKSHCQSLEMYKLLETVLNEVKALGYEPIEDVEVIEKEENEERVLSSTVLHSEKLAIAF 686
Query: 588 GLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDF 646
GLL +P PIRVVK++ +C DCHN ++IS + REI++RD+ + H F NG CSCG +
Sbjct: 687 GLLNLPTATPIRVVKSITMCRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGY 745
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 121/420 (28%), Positives = 215/420 (51%), Gaps = 49/420 (11%)
Query: 55 RRCVDL-----GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIV 109
+ C+D R IHGHI+K GF +FV + LV++Y+K G++ A + FD LP +N+
Sbjct: 66 QECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVN 125
Query: 110 MYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG 169
+WTT++TG +QN A+ LF +M G
Sbjct: 126 -------------------------------AWTTLLTGYVQNSHPLLALQLFIKMLEAG 154
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
+T G VL AC L ++E GKQ+HA++I+ + +G++L Y K + +++A
Sbjct: 155 AYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAI 214
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
F+ + K+V+SWT+++ NG + ++ F +M +G++P+++TL SV+S+C +
Sbjct: 215 KAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVML 274
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
+L+ G Q H S+ G S I + N+++ Y KCG + ++ +LF M + V+W A+++
Sbjct: 275 TLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIA 334
Query: 350 GYAKFGKANE-----------TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
G+AK E + +F+K+ G+KPD T VLS CS +E+G
Sbjct: 335 GHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQI 394
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
++K G+ T ++ + ++ G +++A +MP I W ++++ HG
Sbjct: 395 HGQIIKS-GVLADVVVGTALVSMYNKCGSIDKASKAFLEMP-SRTMISWTSMITGFARHG 452
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/604 (37%), Positives = 358/604 (59%), Gaps = 36/604 (5%)
Query: 78 FVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDK 137
V +PL+ MYA +GL DA+R FDE+P K+ V++ T+I GL+R GL++E+RRL ++
Sbjct: 141 LVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWGLLDEARRLLVQAPER 200
Query: 138 DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIH 197
+ +SWT++I G + G +A+ F M +G+A D+ L+AC L L+ G+ +H
Sbjct: 201 NVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSACSKLKNLDLGRLLH 260
Query: 198 AFI--IRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT--------------------- 234
+ R DN+ V AL+DMY KC I A++VF
Sbjct: 261 LLVGQKRIRMTDNLVV--ALIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNAIIDGYCKLG 318
Query: 235 -----------MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
M ++V+++ +M+ GY +G +A+++F M+R+G+ D+FT+ S+++
Sbjct: 319 HVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMRADNFTVVSLLT 378
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+CA+L +L G H + + + AL+ Y KCG ++++ +F+ M RD +
Sbjct: 379 ACASLGALPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGRVDEATAVFHRMGERDVHT 438
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
WTA+++G A G + ++ F +M G +P VT I VL+ACS + L+++GR +F M
Sbjct: 439 WTAMIAGLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLDEGRLHFNEMR 498
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
+ + P +HY CMID+L+R+G L+EA + MP P+A+ W ++LS+CR+H N+++
Sbjct: 499 SLHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWGSILSACRVHKNIDLA 558
Query: 464 KWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSR 523
+ AAE LL+L P A YV L +IY +W ++R M E+GV+K G S I +
Sbjct: 559 RHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWADAKRVRMLMEERGVKKTAGYSSITVAGQ 618
Query: 524 VHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKL 583
VH F A+D S P++ +I A +E++ ++ GY P S + DV+ EK + L HSEK+
Sbjct: 619 VHKFVANDQSHPWTLEIMAMMEEIACRLKSVGYSPVTSRIAVDVDEEEKEQALLAHSEKI 678
Query: 584 AIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSC 643
AIAFGL+ +PP LPI +VKNLRVC DCH+A K +S++ REI+VRD RFH F++G CSC
Sbjct: 679 AIAFGLISLPPSLPIHIVKNLRVCEDCHSAIKLVSQLWNREIIVRDRSRFHHFRDGACSC 738
Query: 644 GDFW 647
DFW
Sbjct: 739 NDFW 742
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/389 (31%), Positives = 204/389 (52%), Gaps = 28/389 (7%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P + VSW LI+G++ G DAV +N ML DG+ + ++ + C L
Sbjct: 198 PERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAP------DEVAVIGALSACSKLK 251
Query: 62 RQIHGHILKFGFGSYVF-----VGSPLVDMYAKLGLIYDAKRGFDEL-----PEKNIVMY 111
G +L G + L+DMYAK G I A+ FD + PE +
Sbjct: 252 NLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPEP----W 307
Query: 112 NTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLA 171
N +I G + G V+ +R LF M +D I++ +MITG + +G R+A+ LF +MR G+
Sbjct: 308 NAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMR 367
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
D FT S+LTAC L AL G+ +HA I + +++V++G+AL+DMY KC + A +V
Sbjct: 368 ADNFTVVSLLTACASLGALPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGRVDEATAV 427
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASL 291
F M ++V +WTAM+ G NG ++A++ FC M+R+G +P T +V+++C++ + L
Sbjct: 428 FHRMGERDVHTWTAMIAGLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLL 487
Query: 292 EEGT-QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVS 349
+EG F+ + L + ++ + G ++++ L M ++ + V W +++S
Sbjct: 488 DEGRLHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWGSILS 547
Query: 350 GYAKFGKANETIDLFEKMLSHGLK--PDE 376
+ ++ IDL H LK P+E
Sbjct: 548 AC----RVHKNIDLARHAAEHLLKLAPEE 572
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 116/250 (46%), Gaps = 36/250 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +++N +I+G+ G + DA++++ M + G+ T ++L +S +
Sbjct: 330 MGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGM-RADNFTVVSLLTACASLGALPH 388
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +H I + V++G+ L+DMY K G + +A F + E+++ + MI
Sbjct: 389 GRALHASIEQRIVEEDVYLGTALLDMYMKCGRVDEATAVFHRMGERDVHTWTAMI----- 443
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL NG+ ++A++ F +M+ +G T+ +V
Sbjct: 444 --------------------------AGLAFNGMGKDALESFCQMKRDGFQPTSVTYIAV 477
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVG--SALVDMYCKCKSIKYAESVFRTMAWK 238
LTAC L+EG+ +H +R+ HK + V ++D+ + + A + +TM +
Sbjct: 478 LTACSHSSLLDEGR-LHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQ 536
Query: 239 -NVVSWTAML 247
N V W ++L
Sbjct: 537 PNAVIWGSIL 546
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/598 (38%), Positives = 346/598 (57%), Gaps = 49/598 (8%)
Query: 61 GRQIHGHI--------LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYN 112
GR IH H+ G G +FV + LV MYAK GL+
Sbjct: 91 GRLIHRHVEAHGQLSHYSGGAGGGIFVSNSLVSMYAKFGLL------------------- 131
Query: 113 TMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQ-NGLEREAIDLFREMRLEGLA 171
+++ RLF M +++ ++WTT++ L +G + EA+ M +G+A
Sbjct: 132 ------------DDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVA 179
Query: 172 MDQFTFGSVLTACG--GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
+ +TF SVL ACG G+LA +HA ++ +VFV S+L+D Y K +
Sbjct: 180 PNAYTFSSVLGACGTPGVLA-----ALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGR 234
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
VF M +++V W +++ G+ Q+G A+++F M+ G + TL SV+ +C +
Sbjct: 235 RVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMV 294
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
LE G Q H V + + NAL+ Y KCG++ED+ LF+ M RD +SW+ ++S
Sbjct: 295 MLEAGRQVHAH--VLKYERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMIS 352
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
G A+ GK+ E + +F+ M S G+ P+ +T++GVL ACS AGLVE G +YF M K +GI+
Sbjct: 353 GLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQ 412
Query: 410 PIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAES 469
P +H+ CM+D+L RAG+L+EA FI M PDA+ W TLL +CR+H + + +AA
Sbjct: 413 PEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGNLAAYAARE 472
Query: 470 LLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSA 529
+L+L+P + + VLLS+ YA +W + + MR++G++K+PG SWI+ + VH+F A
Sbjct: 473 ILKLEPDDQGARVLLSNTYADLRQWTDAEKSWKAMRDRGMKKEPGRSWIELEKHVHVFIA 532
Query: 530 DDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGL 589
D S P SD I EL +L ++ GYVP VL D+ + +K +L +HSEK+AIAFG
Sbjct: 533 GDLSHPCSDTIVQELNRLIGRISALGYVPQTEFVLQDLAIEQKEDLLKYHSEKMAIAFGT 592
Query: 590 LFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ G PIR++KNLR+C DCH K +SK R I++RD VRFH F++G CSCGD+W
Sbjct: 593 MHAVGGKPIRIMKNLRICGDCHAFAKLVSKSEGRMIIIRDPVRFHHFQDGACSCGDYW 650
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 194/379 (51%), Gaps = 42/379 (11%)
Query: 1 MPFHDGVSWNLLISGHA-SHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
MP + V+W +++ A + G +A++ M +DG+ + TFS++L + +
Sbjct: 141 MPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAP-NAYTFSSVLGACGTPGVL- 198
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+H +K G S VFV S L+D Y KLG + +R FDE+ +++V++N++I G
Sbjct: 199 --AALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFA 256
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ G D + AI+LF M+ G + +Q T S
Sbjct: 257 QSG---------------DGVG----------------AIELFMRMKDAGFSANQGTLTS 285
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL AC G++ LE G+Q+HA +++ ++ ++ + +AL+DMYCKC S++ AE++F M ++
Sbjct: 286 VLRACTGMVMLEAGRQVHAHVLK--YERDLILHNALLDMYCKCGSLEDAEALFHRMPQRD 343
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQFH 298
V+SW+ M+ G QNG S EA+++F M+ G+ P+ T+ V+ +C++ +E+G F
Sbjct: 344 VISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFR 403
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKA 357
+ G+ N +V G+ G ++++ +MN+ D V W L+
Sbjct: 404 SMKKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSG 463
Query: 358 NETIDLFEKMLSHGLKPDE 376
N ++L L+PD+
Sbjct: 464 NLAAYAAREILK--LEPDD 480
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/653 (34%), Positives = 372/653 (56%), Gaps = 43/653 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+ F + SWN +++ H+ + D ++++ MLK+G ++ S L+ + + C L
Sbjct: 73 ITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEG-----KLVDSFNLVFAV-KACFGL 126
Query: 61 -----GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
+ H +K +V L+++Y +LG + +A + F+E+P
Sbjct: 127 SLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPL---------- 176
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
K+S+ W MI G + E +LF MR G +D F
Sbjct: 177 ---------------------KNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPF 215
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIKYAESVFRT 234
++ ACG + A +EGK H I+ + D N F+ ++LVDMY KC + +A +F
Sbjct: 216 VVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEE 275
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
+++++VV W+A++ G+ +NG + E++ +F M + + P+ T S++ +C++L SL++G
Sbjct: 276 ISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQG 335
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
HG + G+ + + + Y KCG I ++R+F ++ ++ SW+ +++G+
Sbjct: 336 RSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMH 395
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G E ++LF +M S P+ VT + VLSACS +G +E+G +F+ M ++YGI P+ +H
Sbjct: 396 GLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEH 455
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
Y CM+D+L RAG+++EA SFIN MP P A W LL +CRIH E+ + A+ LL L+
Sbjct: 456 YACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLE 515
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS 534
YV+LS+IYA G W+ V + R M EKG+ K G + I+ + ++++FS++D +
Sbjct: 516 SDQSGVYVMLSNIYADVGMWEMVKKTRLKMCEKGIHKIVGFTSIEIEEKLYLFSSEDRFA 575
Query: 535 PYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPP 594
+ QI + L +M + GYVPD+ VLHDV+ K ++L HSEKLAI FGLL
Sbjct: 576 YKNTQIESLWNSLKERMRELGYVPDLRFVLHDVDDEVKQEVLCGHSEKLAIVFGLLNSGE 635
Query: 595 GLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G+PIR+ KN+RVC DCH A+K+IS IT+R+I++RD RFH ++G CSCGD+W
Sbjct: 636 GMPIRITKNMRVCGDCHTASKFISLITRRKIIMRDVKRFHHVQDGVCSCGDYW 688
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 127/264 (48%), Gaps = 1/264 (0%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
L Q++A I+ N ++ G + Y + S+ A F + ++N+ SW +L
Sbjct: 27 TLASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILA 86
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
+ +N C + +++F M + G D F L + +C L+ + FH ++ L
Sbjct: 87 SHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEG 146
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
V+ AL+ Y + G++E++H++F E+ +++ V W ++ G+ F + +LF +M
Sbjct: 147 DPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMR 206
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
G + D + G++ AC ++G+ + + +K+ I T ++D+ + G L
Sbjct: 207 RSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFL 266
Query: 429 EEAKSFINKMPFPPDAIGWATLLS 452
+ A ++ + D + W+ +++
Sbjct: 267 DFALKLFEEISY-RDVVVWSAIIA 289
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 17/219 (7%)
Query: 271 IEPDDFTLGSVISSCANLASLEEGT-------QFHGRSLVTGLISFITVSNALVTFYGKC 323
+EP+ F S + L SL T Q + + LV L + + Y +
Sbjct: 1 MEPNPFPPISSRNPTKTLLSLFRFTKTLASNHQLNAQILVNALHRSLLFGPMIFGAYIQL 60
Query: 324 GNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVL 383
G++ + + FN + + SW +++ ++K + + LF++ML G D L+ +
Sbjct: 61 GSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAV 120
Query: 384 SACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT--CMIDILSRAGRLEEAKSFINKMPFP 441
AC L + + + + +K +R D Y ++++ + G LEEA ++P
Sbjct: 121 KACFGLSLFQGAKLFHSLAIK---LRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLK 177
Query: 442 PDAIGWATL----LSSCRIHGNVEIGKWAAESLLELDPY 476
I W + L+ G E+ S ELDP+
Sbjct: 178 NSVI-WGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPF 215
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 232/591 (39%), Positives = 341/591 (57%), Gaps = 89/591 (15%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SWN ++SG A H ++++ + M ++ L+ +F + L + +++
Sbjct: 107 MPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFL-LNEYSFGSALSACAGLMDLNM 165
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+H + K + + V++GS L+DMY+K G + A+
Sbjct: 166 GTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEE---------------------- 203
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+F GM +++ ++W ++IT QNG EA+++F M GL D+ T SV
Sbjct: 204 ---------VFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASV 254
Query: 181 LTACGGLLALEEGKQIHAFIIR-NDHKDNVFVGSALVDMYCKCK---------------- 223
++AC L AL+EG QIHA +++ N +D++ +G+ALVDMY KC
Sbjct: 255 VSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRN 314
Query: 224 ---------------SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR 268
S+K A +F M +NVVSW A++ GY QNG +EEA+++F ++R
Sbjct: 315 VVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKR 374
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIED 328
I P +T G++ L S I V N+L+ Y KCG+IED
Sbjct: 375 ESIWPTHYTFGNL------------------------LKSDIFVGNSLIDMYMKCGSIED 410
Query: 329 SHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
R+F +M RD VSW A++ GYA+ G E + +F KML G KPD VT+IGVL ACS
Sbjct: 411 GSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSH 470
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
AGLVE+GRHYF M +E+G+ P+ DHYTCM+D+L RAG L EAK+ I MP PDA+ W
Sbjct: 471 AGLVEEGRHYFFSM-EEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWG 529
Query: 449 TLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
+LL++C++HGN+E+GK AAE LLE+DP+N YVLLS++YA G+W V ++R+ MR++G
Sbjct: 530 SLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQG 589
Query: 509 VRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPD 559
V K PGCSWI+ +SRVH+F D S P+ QIY+ L+ L +M + GY+PD
Sbjct: 590 VTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPD 640
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/402 (32%), Positives = 231/402 (57%), Gaps = 18/402 (4%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
R +H IL F +F+ + L+D+Y K + DA++ FD +P++N +N++I+ L +
Sbjct: 35 RLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKS 94
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G ++E+ RLF M + D SW +M++G Q+ E+++ F +M E +++++FGS L
Sbjct: 95 GFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSAL 154
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+AC GL+ L G Q+HA + ++ + +V++GSAL+DMY KC S+ AE VF M +N+V
Sbjct: 155 SACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLV 214
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
+W +++ Y QNG + EA+++F M +G+EPD+ TL SV+S+CA+L +L+EG Q H R
Sbjct: 215 TWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARV 274
Query: 302 LVTG-LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ T + + NALV Y KC + ++ R+F+ M++R+ VS T++VSGYA+
Sbjct: 275 VKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAA 334
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY----- 415
+F KM + V+ +++ ++ G E+ F ++ +E I P H +
Sbjct: 335 RFMFSKMTQRNV----VSWNALIAGYTQNGENEEALRLFRLLKRE-SIWPTHYTFGNLLK 389
Query: 416 ------TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
+ID+ + G +E+ KM D + W ++
Sbjct: 390 SDIFVGNSLIDMYMKCGSIEDGSRVFEKMK-ERDCVSWNAII 430
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 171/364 (46%), Gaps = 35/364 (9%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
F +L +C + + +HA I+ +F+ + L+D+Y KC + A +F M
Sbjct: 18 FAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMP 77
Query: 237 WKNV-------------------------------VSWTAMLVGYGQNGCSEEAVKIFCN 265
+N SW +M+ G+ Q+ EE+++ F
Sbjct: 78 QRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVK 137
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M R ++++ GS +S+CA L L GTQ H + + + + +AL+ Y KCG+
Sbjct: 138 MHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGS 197
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+ + +F+ M R+ V+W +L++ Y + G A+E +++F +M+ GL+PDEVTL V+SA
Sbjct: 198 VACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSA 257
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
C+ +++G +VK R ++D+ ++ ++ EA+ ++M + +
Sbjct: 258 CASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSI-RNVV 316
Query: 446 GWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
+++S +V+ ++ + + N S+ L + Y G+ + +L R ++
Sbjct: 317 SETSMVSGYARAASVKAARFMFSKMTQ---RNVVSWNALIAGYTQNGENEEALRLFRLLK 373
Query: 506 EKGV 509
+ +
Sbjct: 374 RESI 377
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 4/133 (3%)
Query: 273 PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRL 332
P+ ++ SC S H R L+T I + N L+ YGKC ++D+ +L
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 333 FNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLV 392
F+ M R+ +W +L+S K G +E LF M +PD+ + ++S ++
Sbjct: 73 FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSM----PEPDQCSWNSMVSGFAQHDRF 128
Query: 393 EKGRHYFEIMVKE 405
E+ YF M +E
Sbjct: 129 EESLEYFVKMHRE 141
>gi|302782465|ref|XP_002973006.1| hypothetical protein SELMODRAFT_98207 [Selaginella moellendorffii]
gi|300159607|gb|EFJ26227.1| hypothetical protein SELMODRAFT_98207 [Selaginella moellendorffii]
Length = 698
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 248/685 (36%), Positives = 382/685 (55%), Gaps = 42/685 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLG-NLSRITFSTMLIMSSSRRCVD 59
MP + SW ++IS + G +A+ +Y +++ FS++L + +C++
Sbjct: 18 MPLRNEFSWAIIISAYVGAGKEQEALCLYRTLVRSSTEIQADAFIFSSVLAACARLKCLE 77
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G +IH I+K G V + + LV MYAK G I AK+ FD + +++V +N M++
Sbjct: 78 QGLEIHERIVKRGVKQDVGLQNALVTMYAKCGRIDRAKQVFDRITHRDVVSWNAMVSANA 137
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
G +E + ++++ M D + W+TMI+ G +REA++L+REM L + + T +
Sbjct: 138 EAGHLEVALKIYQEMVSADVLCWSTMISAEAMAGHDREALELYREMIL-SVRPNASTLAT 196
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC----------------- 222
VL AC L L G + I++ + VG+ LV++Y +
Sbjct: 197 VLAACTRLGDLSSGALVRDGAIQSGLDRDAVVGTTLVNLYARFGDVIAAREVLFDSMKDR 256
Query: 223 ---------------KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQ 267
+ AE +FR M K+V+SW AM+ G+GQNG ++A+++F M
Sbjct: 257 TVVSWNAMVTAFAQNARVDEAEKLFREMPDKSVISWNAMIAGFGQNGRPKQALELFRRMD 316
Query: 268 RNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIE 327
G++P T SV+ +CANL + G +F + L I+V+N++ YGKCG E
Sbjct: 317 LEGLQPSRMTYCSVLDACANLTASSLG-RFICDGMDEALAKDISVANSICNMYGKCGLPE 375
Query: 328 DSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS 387
+ + F EM RD VSWTA+++ Y++ G ++E +D+F M+ G++P+ +TLI LSACS
Sbjct: 376 LARQTFLEMTYRDVVSWTAIIAAYSQNGYSSEALDIFRIMVQAGVEPNGITLINTLSACS 435
Query: 388 RAGLVEKGRHYFEIMVK--EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
L ++G F +V YG+ H+ C ID+L RAG L++A++ I KMPF A+
Sbjct: 436 HGALFDEGSDIFSSLVSGDYYGVTANESHFLCAIDLLGRAGYLKDAETLITKMPFKAGAV 495
Query: 446 GWATLLSSCRIHGNVEIGKWAAESLLELDPY---NPASYVLLSSIYASKGKWDHVSQLRR 502
W +LLS+CR +++ A L ELD +PA YV+LS+IYAS G +LR
Sbjct: 496 AWTSLLSACRTFRDLKRAGRVANHLFELDESSIKDPAPYVMLSNIYASAGDRAAEMKLRD 555
Query: 503 TMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSS 562
+R K +K PG S I K + + F + D + P D Y EL +L +KM + GYVPD +
Sbjct: 556 QIRIKCRKKLPGKSTITIKGQTNEFYSLDETHPRRDDAYNELRRLFQKMKEAGYVPD--T 613
Query: 563 VLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQ 622
+ ++E E + L++HSEKLA+AFG+L PP + +VKNLRVCSDCHN K++SK
Sbjct: 614 RIAEMEEEETEQSLSYHSEKLALAFGVLNTPPEASLCIVKNLRVCSDCHNVIKFLSKHLN 673
Query: 623 REILVRDAVRFHLFKNGECSCGDFW 647
R+I VRDA RFH F+NG CSC D W
Sbjct: 674 RKIAVRDATRFHHFENGFCSCRDCW 698
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 177/401 (44%), Gaps = 67/401 (16%)
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG--LAMDQFTFGS 179
G +E++R +F M ++ SW +I+ + G E+EA+ L+R + + D F F S
Sbjct: 6 GRLEDARAVFDSMPLRNEFSWAIIISAYVGAGKEQEALCLYRTLVRSSTEIQADAFIFSS 65
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL AC L LE+G +IH I++ K +V + +ALV MY KC I A+ VF + ++
Sbjct: 66 VLAACARLKCLEQGLEIHERIVKRGVKQDVGLQNALVTMYAKCGRIDRAKQVFDRITHRD 125
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNM--------------------QRNGIE------- 272
VVSW AM+ + G E A+KI+ M R +E
Sbjct: 126 VVSWNAMVSANAEAGHLEVALKIYQEMVSADVLCWSTMISAEAMAGHDREALELYREMIL 185
Query: 273 ---PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN---- 325
P+ TL +V+++C L L G ++ +GL V LV Y + G+
Sbjct: 186 SVRPNASTLATVLAACTRLGDLSSGALVRDGAIQSGLDRDAVVGTTLVNLYARFGDVIAA 245
Query: 326 ----------------------------IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
++++ +LF EM + +SW A+++G+ + G+
Sbjct: 246 REVLFDSMKDRTVVSWNAMVTAFAQNARVDEAEKLFREMPDKSVISWNAMIAGFGQNGRP 305
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
+ ++LF +M GL+P +T VL AC+ GR + M + + C
Sbjct: 306 KQALELFRRMDLEGLQPSRMTYCSVLDACANLTASSLGRFICDGMDEALAKDISVANSIC 365
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
++ + G E A+ +M + D + W ++++ +G
Sbjct: 366 --NMYGKCGLPELARQTFLEMTY-RDVVSWTAIIAAYSQNG 403
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 154/330 (46%), Gaps = 46/330 (13%)
Query: 218 MYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG--IEPDD 275
MY C ++ A +VF +M +N SW ++ Y G +EA+ ++ + R+ I+ D
Sbjct: 1 MYRDCGRLEDARAVFDSMPLRNEFSWAIIISAYVGAGKEQEALCLYRTLVRSSTEIQADA 60
Query: 276 FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNE 335
F SV+++CA L LE+G + H R + G+ + + NALVT Y KCG I+ + ++F+
Sbjct: 61 FIFSSVLAACARLKCLEQGLEIHERIVKRGVKQDVGLQNALVTMYAKCGRIDRAKQVFDR 120
Query: 336 MNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH------------------------- 370
+ RD VSW A+VS A+ G + ++++M+S
Sbjct: 121 ITHRDVVSWNAMVSANAEAGHLEVALKIYQEMVSADVLCWSTMISAEAMAGHDREALELY 180
Query: 371 -----GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY----TCMIDI 421
++P+ TL VL+AC+R G + G +V++ I+ D T ++++
Sbjct: 181 REMILSVRPNASTLATVLAACTRLGDLSSG-----ALVRDGAIQSGLDRDAVVGTTLVNL 235
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL-ELDPYNPAS 480
+R G + A+ + + W ++++ + V+ AE L E+ + S
Sbjct: 236 YARFGDVIAAREVLFDSMKDRTVVSWNAMVTAFAQNARVD----EAEKLFREMPDKSVIS 291
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVR 510
+ + + + G+ +L R M +G++
Sbjct: 292 WNAMIAGFGQNGRPKQALELFRRMDLEGLQ 321
>gi|357139833|ref|XP_003571481.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Brachypodium distachyon]
Length = 617
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/559 (40%), Positives = 334/559 (59%), Gaps = 10/559 (1%)
Query: 92 LIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKD--KDSISWTTMITGL 149
L+ DA+ FD +P + V YNT+++ G V +R LF M ++ SW TM++GL
Sbjct: 66 LLADARHLFDRIPRPDAVSYNTLLSCHFAAGDVRGARDLFAAMPATARNVTSWNTMLSGL 125
Query: 150 MQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNV 209
++G EA +F M ++ S G + A EE F D K+N
Sbjct: 126 SRSGAVGEARAVFLAMPARN-SISWNAMVSCFAHAGDMCAAEE-----CFEDAPD-KENA 178
Query: 210 FVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN 269
+ +A+V Y ++ A F M +++VSW A++ GY +N +E+A+ +F M R+
Sbjct: 179 VLWTAMVSGYMDSGHVEKAMQFFEAMPVRSLVSWNAVVAGYVKNSRAEDALWVFKTMVRD 238
Query: 270 G-IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIED 328
+ P++ TL SV+ C+NL++L G Q H L +T +LV+ Y KCG+++
Sbjct: 239 ADVRPNESTLSSVLLGCSNLSALGFGRQVHQWCTKLPLSRRVTAGTSLVSMYCKCGDLDG 298
Query: 329 SHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
+ +LF+EM +RD ++W A++SGYA G E I+LFEKM S G++P+ +T + VL+AC
Sbjct: 299 ACKLFSEMRIRDVIAWNAMISGYAHHGDGREAIELFEKMKSQGVEPNWITFVAVLTACIH 358
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
G+ + G FE M + YGI DHY+CM+D+L RAG LE A S I MPF P +
Sbjct: 359 TGMCDFGMQCFERMQEVYGIEARVDHYSCMVDLLCRAGSLERAVSLIRSMPFQPHPSAYG 418
Query: 449 TLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
TLL++ R++ N+E ++AA L+E +P N +YV L++IYA +W VS++RR M++
Sbjct: 419 TLLNASRVYKNMEFAEFAAGKLIEQNPQNAGAYVQLANIYAVANQWADVSRVRRWMKDNA 478
Query: 509 VRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVE 568
V K PG SW++ +H+F ++D P I+ L +L +M GYVPD+ LHDV+
Sbjct: 479 VVKTPGYSWVEINGVIHVFRSNDRLHPQLSLIHERLCQLEERMKAMGYVPDLDFALHDVD 538
Query: 569 LSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVR 628
S K++ML HSEKLAIAFGLL PG+ +R+ KNLRVC DCH A K ISKI REI++R
Sbjct: 539 ESLKVQMLMRHSEKLAIAFGLLSTAPGITLRIFKNLRVCGDCHTAAKLISKIEDREIILR 598
Query: 629 DAVRFHLFKNGECSCGDFW 647
D RFH F++G CSCGD+W
Sbjct: 599 DTTRFHHFRSGHCSCGDYW 617
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 158/370 (42%), Gaps = 72/370 (19%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VS+N L+S H + G V A ++ M +++R
Sbjct: 77 IPRPDAVSYNTLLSCHFAAGDVRGARDLFAAM------------------PATARNVTSW 118
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYN-------- 112
+ G ++ G + +A+ F +P +N + +N
Sbjct: 119 NTMLSG--------------------LSRSGAVGEARAVFLAMPARNSISWNAMVSCFAH 158
Query: 113 ------------------------TMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITG 148
M++G + G VE++ + F M + +SW ++ G
Sbjct: 159 AGDMCAAEECFEDAPDKENAVLWTAMVSGYMDSGHVEKAMQFFEAMPVRSLVSWNAVVAG 218
Query: 149 LMQNGLEREAIDLFREM-RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKD 207
++N +A+ +F+ M R + ++ T SVL C L AL G+Q+H + +
Sbjct: 219 YVKNSRAEDALWVFKTMVRDADVRPNESTLSSVLLGCSNLSALGFGRQVHQWCTKLPLSR 278
Query: 208 NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQ 267
V G++LV MYCKC + A +F M ++V++W AM+ GY +G EA+++F M+
Sbjct: 279 RVTAGTSLVSMYCKCGDLDGACKLFSEMRIRDVIAWNAMISGYAHHGDGREAIELFEKMK 338
Query: 268 RNGIEPDDFTLGSVISSCANLASLEEGTQ-FHGRSLVTGLISFITVSNALVTFYGKCGNI 326
G+EP+ T +V+++C + + G Q F V G+ + + + +V + G++
Sbjct: 339 SQGVEPNWITFVAVLTACIHTGMCDFGMQCFERMQEVYGIEARVDHYSCMVDLLCRAGSL 398
Query: 327 EDSHRLFNEM 336
E + L M
Sbjct: 399 ERAVSLIRSM 408
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 114/245 (46%), Gaps = 44/245 (17%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP VSWN +++G+ + DA+ V+ M++D + T S++L+ S+ +
Sbjct: 204 MPVRSLVSWNAVVAGYVKNSRAEDALWVFKTMVRDADVRPNESTLSSVLLGCSNLSALGF 263
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H K V G+ LV MY K G + A + F E+ ++++ +N MI+G
Sbjct: 264 GRQVHQWCTKLPLSRRVTAGTSLVSMYCKCGDLDGACKLFSEMRIRDVIAWNAMISGYAH 323
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G +G E AI+LF +M+ +G+ + TF +V
Sbjct: 324 HG-----------------------------DGRE--AIELFEKMKSQGVEPNWITFVAV 352
Query: 181 LTAC-------GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
LTAC G+ E ++++ R DH S +VD+ C+ S++ A S+ R
Sbjct: 353 LTACIHTGMCDFGMQCFERMQEVYGIEARVDHY------SCMVDLLCRAGSLERAVSLIR 406
Query: 234 TMAWK 238
+M ++
Sbjct: 407 SMPFQ 411
>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 758
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 234/653 (35%), Positives = 370/653 (56%), Gaps = 45/653 (6%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V+W L+ G + A+ V+ ML G S T S +L SS + + LG Q H
Sbjct: 134 VAWTTLMVGFVQNSQPKHAIHVFQEMLYAG-SYPSVYTLSAVLHACSSLQSLKLGDQFHA 192
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+I+K+ VGS L +Y+K G + DA + F +
Sbjct: 193 YIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRI----------------------- 229
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
++K+ ISWT+ ++ NG + + LF EM + ++FT S L+ C
Sbjct: 230 --------REKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCE 281
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+L+LE G Q+++ I+ ++ N+ V ++L+ +Y K I A +F M ++V+W AM
Sbjct: 282 ILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAM 341
Query: 247 LVGYGQ---------NGC--SEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
+ G+ Q + C EA+K+F + +G++PD FTL SV+S C+ + ++E+G
Sbjct: 342 IAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGE 401
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
Q H +++ TG +S + VS +L++ Y KCG+IE + + F EM+ R ++WT++++G+++ G
Sbjct: 402 QIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHG 461
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
+ + + +FE M G++P+ VT +GVLSACS AG+V + +YFEIM K+Y I+P DHY
Sbjct: 462 MSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPAMDHY 521
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
CM+D+ R GRLE+A +FI KM + P W+ ++ C+ HGN+E+G +AAE LL L P
Sbjct: 522 ECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHGNLELGFYAAEQLLSLKP 581
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSP 535
+P +YVLL ++Y S +++ VS++R+ M E+ V K SWI K +V+ F + + P
Sbjct: 582 KDPETYVLLLNMYLSAERFEDVSRVRKMMEEEKVGKLKDWSWISIKDKVYSFKTNGKTHP 641
Query: 536 YSDQIYAELEKLNRKMIKEGY--VPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIP 593
S I LE L K+ GY + + + E + +HSEKLAI FGL +P
Sbjct: 642 QSSLICKSLEDLLAKVKNVGYEMLESVEISDEEEEEEKTSSPNIYHSEKLAITFGLENLP 701
Query: 594 PGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDF 646
PIRVVK+ +C D HN KY+S + REI+V+D+ R H F NGECSCG+F
Sbjct: 702 NSSPIRVVKSTLICRDSHNFIKYVSTLAGREIIVKDSKRLHKFANGECSCGNF 754
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/406 (31%), Positives = 202/406 (49%), Gaps = 44/406 (10%)
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
+HGH++K G FV S LV++YAK G + DA
Sbjct: 89 VHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDA--------------------------- 121
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
RR+F M ++ ++WTT++ G +QN + AI +F+EM G +T +VL A
Sbjct: 122 ----RRVFDNMLRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHA 177
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C L +L+ G Q HA+II+ + VGSAL +Y KC ++ A F + KNV+SW
Sbjct: 178 CSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISW 237
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
T+ + NG + +++F M I+P++FTL S +S C + SLE GTQ + +
Sbjct: 238 TSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIK 297
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF--------- 354
G S + V N+L+ Y K G I ++HRLFN M+ V+W A+++G+A+
Sbjct: 298 FGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLS 357
Query: 355 --GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
+ +E + LF K+ G+KPD TL VLS CSR +E+G +K + +
Sbjct: 358 ACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVI 417
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
T +I + S+ G +E A +M I W ++++ HG
Sbjct: 418 VS-TSLISMYSKCGSIERASKAFLEMS-TRTMIAWTSMITGFSQHG 461
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 145/273 (53%), Gaps = 2/273 (0%)
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L C + E + +H +++ DN FV S LV++Y KC +++ A VF M +N
Sbjct: 73 LLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRN 132
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VV+WT ++VG+ QN + A+ +F M G P +TL +V+ +C++L SL+ G QFH
Sbjct: 133 VVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHA 192
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ + +V +AL + Y KCG +ED+ + F+ + ++ +SWT+ VS A G +
Sbjct: 193 YIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVK 252
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ LF +M++ +KP+E TL LS C +E G + + +K +G ++
Sbjct: 253 GLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIK-FGYESNLRVRNSLL 311
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ ++G + EA N+M + W +++
Sbjct: 312 YLYLKSGCIVEAHRLFNRMD-DASMVTWNAMIA 343
>gi|357457659|ref|XP_003599110.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488158|gb|AES69361.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 623
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/607 (36%), Positives = 359/607 (59%), Gaps = 35/607 (5%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
ST+++ S V + R IH H++K F+G LV Y K+G DA FDE
Sbjct: 48 LSTLILHLKSSSSVSICRIIHAHVIKSLDYRDGFIGDQLVSCYLKMGPTKDAYLLFDE-- 105
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
M KD +SW ++++GL + G E + +F +
Sbjct: 106 -----------------------------MPKKDFVSWNSLVSGLAKIGQLGECLSVFCK 136
Query: 165 MRLEG-LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
M+ + L +++FTF SV++AC A +EG +H ++ V V +ALV+MY K
Sbjct: 137 MKSDSELKLNEFTFLSVISACVSEKACDEGYYVHCCAMKLGLVYEVKVVNALVNMYGKFG 196
Query: 224 SIKYAESVFRTM--AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
++ A +F M + K++VSW +++ QNG EA F M+ NG PDD T+ S+
Sbjct: 197 FVESAFRLFSEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMRVNGFFPDDATMVSL 256
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE 341
+ +C N HG GL +T+ L+ Y K G + +S ++F E++ D+
Sbjct: 257 LQACENFPLGRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSRKVFEEISKPDK 316
Query: 342 VSWTALVSGYAKFGKANETIDLFEKML-SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
V+WTA+++GYA G E I+ FE+++ G++PD VT +LSACS +GLV++G+++F
Sbjct: 317 VAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSACSHSGLVKEGKYFFR 376
Query: 401 IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
+M Y ++P DHY+CM+D+L R G L++A I MPF P++ W LL +CR+H N+
Sbjct: 377 VMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAHELIKNMPFEPNSGVWGALLGACRVHRNI 436
Query: 461 EIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKY 520
++GK AA++L+ LDP +P +Y++LS++Y++ G W+ S++R M+ K + ++ GCS+I++
Sbjct: 437 DLGKEAAKNLIALDPSDPRNYIMLSNMYSAAGLWNDASKVRTLMKNKVLTRNQGCSFIEH 496
Query: 521 KSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHS 580
+++H F DD++ P S +I+ +LE++ +K+ G+V + S+LHDV+ KI M+ HS
Sbjct: 497 GNKIHRFVVDDYTHPDSHRIHKKLEEVMKKIQDVGFVHETESILHDVDEEVKIDMITKHS 556
Query: 581 EKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGE 640
EK+A+A+GLL +P+ ++KNLR+C DCHN K++S + +R I++RD RFH F G
Sbjct: 557 EKIALAYGLLVTNADMPLVIIKNLRICRDCHNTVKFVSMVEKRTIIIRDTKRFHQFSGGL 616
Query: 641 CSCGDFW 647
CSCGD+W
Sbjct: 617 CSCGDYW 623
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 168/366 (45%), Gaps = 36/366 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN L+SG A G + + + V+ M D L+ TF +++ S + D
Sbjct: 106 MPKKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDE 165
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +H +K G V V + LV+MY K G + A R F E+PE
Sbjct: 166 GYYVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPE--------------- 210
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+K +SW +++ QNG+ EA + F MR+ G D T S+
Sbjct: 211 --------------SEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMRVNGFFPDDATMVSL 256
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC + +H I +N+ + + L+++Y K + + VF ++ +
Sbjct: 257 LQACENFPLGRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSRKVFEEISKPDK 316
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQR-NGIEPDDFTLGSVISSCANLASLEEGTQ-FH 298
V+WTAML GY +GC +EA++ F + R G+EPD T ++S+C++ ++EG F
Sbjct: 317 VAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSACSHSGLVKEGKYFFR 376
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKA 357
S V + + + +V G+CG ++D+H L M W AL+ +
Sbjct: 377 VMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAHELIKNMPFEPNSGVWGALLGA----CRV 432
Query: 358 NETIDL 363
+ IDL
Sbjct: 433 HRNIDL 438
>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 802
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/595 (36%), Positives = 349/595 (58%), Gaps = 37/595 (6%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
+ + + + +D R+IH H+ F F+ + L+ +Y K G + +A + FD+
Sbjct: 53 VYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDK- 111
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
M++KD +SWT++I G QN + EAI L
Sbjct: 112 ------------------------------MRNKDMVSWTSLIAGYAQNDMPAEAIGLLP 141
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
M + FTF S+L A G G QIHA ++ D ++V+VGSAL+DMY +C
Sbjct: 142 GMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCG 201
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
+ A +VF + KN VSW A++ G+ + G E A+ +F MQRNG E FT S+ S
Sbjct: 202 KMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFS 261
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+ A + +LE+G H + + V N ++ Y K G++ D+ ++F + +D V+
Sbjct: 262 ALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVT 321
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
W ++++ +A++G E + FE+M G+ ++++ + +L+ACS GLV++G+HYF+ M+
Sbjct: 322 WNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFD-MI 380
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
KEY + P +HY ++D+L RAG L A FI KMP P A W LL++CR+H N ++G
Sbjct: 381 KEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVG 440
Query: 464 KWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSR 523
++AA+ + +LDP + VLL +IYAS G WD +++R+ M+ GV+K+P CSW++ ++
Sbjct: 441 QFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIENS 500
Query: 524 VHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKL 583
VH+F A+D + P +++IY ++++ K+ KEGYVPDM VL V+ E+ L +HSEK+
Sbjct: 501 VHMFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKI 560
Query: 584 AIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKN 638
A+AF L+ +P G IR++KN+R+C DCH+A KYISK+ +REI++ HL K+
Sbjct: 561 ALAFALIQMPAGATIRIMKNIRICGDCHSAFKYISKVFEREIVI-----IHLHKD 610
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 152/293 (51%), Gaps = 32/293 (10%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW LI+G+A + +A+ + MLK G + TF+++L + +G QI
Sbjct: 116 DMVSWTSLIAGYAQNDMPAEAIGLLPGMLK-GRFKPNGFTFASLLKAVGAYADSGIGGQI 174
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +K + V+VGS L+DMYA+ G + A FD+L KN V +N +I+G R+G
Sbjct: 175 HALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDG 234
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
E T LM +F EM+ G FT+ S+ +A
Sbjct: 235 E---------------------TALM----------VFAEMQRNGFEATHFTYSSIFSAL 263
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G+ ALE+GK +HA +I++ K FVG+ ++DMY K S+ A VF + K++V+W
Sbjct: 264 AGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWN 323
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
+ML + Q G +EAV F M+++GI + + ++++C++ ++EG +
Sbjct: 324 SMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHY 376
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 157/304 (51%), Gaps = 5/304 (1%)
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
LA + + +TAC L++ ++IHA + + + F+ ++L+ +YCKC S+ A
Sbjct: 47 LAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAH 106
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
VF M K++VSWT+++ GY QN EA+ + M + +P+ FT S++ + A
Sbjct: 107 KVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYA 166
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
G Q H ++ + V +AL+ Y +CG ++ + +F++++ ++ VSW AL+S
Sbjct: 167 DSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALIS 226
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
G+A+ G + +F +M +G + T + SA + G +E+G+ M+K
Sbjct: 227 GFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKL 286
Query: 410 PIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAES 469
T M+D+ +++G + +A+ ++ D + W ++L++ +G +GK A
Sbjct: 287 TAFVGNT-MLDMYAKSGSMIDARKVFERV-LNKDLVTWNSMLTAFAQYG---LGKEAVSH 341
Query: 470 LLEL 473
E+
Sbjct: 342 FEEM 345
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 127/274 (46%), Gaps = 39/274 (14%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
+GVSWN LISG A G A+ V+ M ++G + T+S++ + ++ G+ +
Sbjct: 217 NGVSWNALISGFARKGDGETALMVFAEMQRNGF-EATHFTYSSIFSALAGIGALEQGKWV 275
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H H++K FVG+ ++DMYAK G + DA++ F+ + K++V +N+M+T
Sbjct: 276 HAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLT-------- 327
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
Q GL +EA+ F EMR G+ ++Q +F +LTAC
Sbjct: 328 -----------------------AFAQYGLGKEAVSHFEEMRKSGIYLNQISFLCILTAC 364
Query: 185 --GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAES-VFRTMAWKNVV 241
GGL ++EGK I + + + +VD+ + + YA +F+
Sbjct: 365 SHGGL--VKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAA 422
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDD 275
W A+L + ++ V F ++PDD
Sbjct: 423 VWGALLAACRMHKNAK--VGQFAADHVFQLDPDD 454
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/623 (36%), Positives = 357/623 (57%), Gaps = 33/623 (5%)
Query: 58 VDLGRQIHGHILKFGFGSYV-FVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMIT 116
V LGR +H + S V + SP++ MYA+LGL DA+R FDE K++V + T+I+
Sbjct: 120 VLLGRMLHAACFRTLLPSAVPLIASPIIHMYAELGLPGDARRAFDEASVKDVVAWTTVIS 179
Query: 117 GLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
GL + GL++++RRL ++ ++WT +I+G + G EA+D F M +G+A D+ T
Sbjct: 180 GLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVT 239
Query: 177 FGSVLTACGGLLALEEGKQIHAFI--IRNDHKDNVFVG---------------------- 212
+L+ACG L L G +H + R D + V
Sbjct: 240 VIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDALG 299
Query: 213 --------SALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFC 264
+A++D YCK + A S+F M +V+++ +++ GY G EA+ +F
Sbjct: 300 RGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFT 359
Query: 265 NMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCG 324
M+R+G+ D+FT+ ++++ A+L +L +G H + + + AL+ Y KCG
Sbjct: 360 KMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDVYLGTALLDMYMKCG 419
Query: 325 NIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
+E++ F +M+VRD +W+A++ G A G ++ F M G + VT I VL+
Sbjct: 420 RVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIAVLT 479
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDA 444
ACS + L+++GR YF+ M + IRP +HY CMID+L R+G L+EA + MP P+A
Sbjct: 480 ACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMDLVQTMPMQPNA 539
Query: 445 IGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTM 504
+ WA++LS+CR+H NV++ + AA LL+L+P A YV + +IY +W+ S++RR M
Sbjct: 540 VIWASILSACRVHKNVDLAQNAAHHLLKLEPAEDAVYVQMYNIYIDSRQWEDASKIRRLM 599
Query: 505 REKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVL 564
++GV+K G S I +VH F D S P +I +E++ R++ GY P S +
Sbjct: 600 EKRGVKKTAGYSSIAVAGQVHKFIVGDRSHPQIAEIVVMMEEIGRRLKSAGYSPITSQIT 659
Query: 565 HDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQRE 624
DV+ EK + L HSEKLAIAFGL+ + P LP+ ++KNLRVC DCH+A K IS++ RE
Sbjct: 660 VDVDEEEKEQALLAHSEKLAIAFGLVSLAPNLPVHIIKNLRVCEDCHSAIKLISRLWNRE 719
Query: 625 ILVRDAVRFHLFKNGECSCGDFW 647
I+VRD RFH F+ G CSC DFW
Sbjct: 720 IIVRDRSRFHHFRGGVCSCNDFW 742
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/377 (30%), Positives = 198/377 (52%), Gaps = 12/377 (3%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P + V+W LISG++ G +AV +N ML DG+ +T ML + ++ G
Sbjct: 198 PVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAP-DEVTVIGMLSACGQLKDLNFG 256
Query: 62 RQIHGHI--LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPE-KNIVMYNTMITGL 118
+H + + + V L+DMYAK G A+ FD L + +N MI G
Sbjct: 257 CSLHMLVGDKRMLMSDKLVVA--LIDMYAKCGDTGRAREVFDALGRGRGPQPWNAMIDGY 314
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+ G V+ +R LF M+D D I++ ++ITG + G REA+ LF +MR GL D FT
Sbjct: 315 CKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRHGLGADNFTMV 374
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
+LTA L AL +G+ +HA I + + +V++G+AL+DMY KC ++ A F+ M+ +
Sbjct: 375 GLLTASASLGALPQGRALHACIEQRLVERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVR 434
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQF 297
+V +W+AM+ G NG + A++ F M+ +G + T +V+++C++ L+EG F
Sbjct: 435 DVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIAVLTACSHSCLLDEGRLYF 494
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGK 356
L+ + I ++ G+ G ++++ L M ++ + V W +++S +
Sbjct: 495 DEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMDLVQTMPMQPNAVIWASILSAC----R 550
Query: 357 ANETIDLFEKMLSHGLK 373
++ +DL + H LK
Sbjct: 551 VHKNVDLAQNAAHHLLK 567
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 155/365 (42%), Gaps = 47/365 (12%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS------IKYAESVFRTMAWKNVVS 242
++ + ++HA + + + + L++ C S ++YA S+F M +
Sbjct: 11 SVRQATELHALVTTSGRLLHPPSAAHLLNSLTSCISPSDPLHLRYALSLFDRMPCSTFLF 70
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN-LASLEEGTQFHGRS 301
TA+ + + + + ++ M + PD FT + CA A + G H
Sbjct: 71 DTALRACFRASSGPDRPIILYRRMHGVDVPPDAFTFHFLFKCCARGGAHVLLGRMLHAAC 130
Query: 302 LVTGLISFIT-VSNALVTFY-------------------------------GKCGNIEDS 329
T L S + +++ ++ Y K G ++D+
Sbjct: 131 FRTLLPSAVPLIASPIIHMYAELGLPGDARRAFDEASVKDVVAWTTVISGLAKMGLLDDA 190
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
RL VR+ V+WT L+SGY++ G+A E +D F MLS G+ PDEVT+IG+LSAC +
Sbjct: 191 RRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSACGQL 250
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
+ G ++V + + +ID+ ++ G A+ + + W
Sbjct: 251 KDLNFG-CSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDALGRGRGPQPWNA 309
Query: 450 LLSS-CRIHGNVEIGKWAAESLL-ELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREK 507
++ C++ G+V+I A SL +++ ++ ++ L + Y G+ L MR
Sbjct: 310 MIDGYCKV-GHVDI----ARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRH 364
Query: 508 GVRKD 512
G+ D
Sbjct: 365 GLGAD 369
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 113/249 (45%), Gaps = 34/249 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M HD +++N LI+G+ G + +A+ ++ M + GLG T +L S+S +
Sbjct: 330 MEDHDVITFNSLITGYIHGGRLREALLLFTKMRRHGLGA-DNFTMVGLLTASASLGALPQ 388
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +H I + V++G+ L+DMY K G + +A F ++ +++ ++ M
Sbjct: 389 GRALHACIEQRLVERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSAM------ 442
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
I GL NG+ + A++ F M+ +G + T+ +V
Sbjct: 443 -------------------------IGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIAV 477
Query: 181 LTACGGLLALEEGK-QIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK- 238
LTAC L+EG+ + ++ + + ++D+ + + A + +TM +
Sbjct: 478 LTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMDLVQTMPMQP 537
Query: 239 NVVSWTAML 247
N V W ++L
Sbjct: 538 NAVIWASIL 546
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/651 (34%), Positives = 373/651 (57%), Gaps = 39/651 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D +SWN L++ + G DA+ + M++ G +++ +TF++ L S D
Sbjct: 423 MPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTG-KSVNYVTFTSALAACFSPEFFDK 481
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +HG ++ G +G+ LV MY K+G +
Sbjct: 482 GRILHGLVVVSGLFDNQIIGNALVSMYGKIGGM--------------------------- 514
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SRR+ M +D ++W +I G +N +A+ F+ +R+EG++ + T SV
Sbjct: 515 ----STSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSV 570
Query: 181 LTAC---GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
L+AC G LL E GK +HA+I+ + + V ++L+ MY KC + ++ +F +
Sbjct: 571 LSACLVPGDLL--ERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDN 628
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
+++++W A+L +G EE +K+ M+ G+ D F+ +S+ A LA LEEG Q
Sbjct: 629 RSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQL 688
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
HG ++ G + NA Y KCG I + ++ R SW L+S + G
Sbjct: 689 HGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYF 748
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
E + F +ML G+KP VT + +L+ACS GLV++G Y++++ K++G+ P +H C
Sbjct: 749 EEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCIC 808
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
+ID+L R+GRL EA++FI+KMP P+ + W +LL+SC+IH +++ G+ AAE+L +L+P +
Sbjct: 809 VIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPED 868
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
+ +VL S+++A+ G+W+ V +R+ M K ++K CSW+K K +V F D + P +
Sbjct: 869 DSVFVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQT 928
Query: 538 DQIYAELEKLNRKMIKE-GYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGL 596
+IYA+LE + +K+IKE GYV D S L D + +K L +HSE+LA+A+ L+ P G
Sbjct: 929 MEIYAKLEDI-KKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGS 987
Query: 597 PIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+R+ KNLR+CSDCH+ K++S++ R I++RD RFH F++G CSC D+W
Sbjct: 988 TVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFESGLCSCKDYW 1038
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 195/352 (55%), Gaps = 11/352 (3%)
Query: 107 NIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR 166
+++ NT+I + G V+ +R LF M ++ +SW TM++G+++ GL E ++ F++M
Sbjct: 92 SVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMC 151
Query: 167 LEGLAMDQFTFGSVLTACGGLLAL-EEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI 225
G+ F S++TACG ++ EG Q+H F+ ++ +V+V +A++ +Y +
Sbjct: 152 DLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLV 211
Query: 226 KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
+ VF M +NVVSWT+++VGY G EE + I+ +M+ G+E ++ ++ VISSC
Sbjct: 212 SCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSC 271
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
L G Q G+ + +GL S + V N+L++ +G GN++ ++ +FN+++ RD +SW
Sbjct: 272 GLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWN 331
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE 405
++V+ YA+ G E+ +F M + + T+ +LS + GR ++VK
Sbjct: 332 SIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVK- 390
Query: 406 YGIRPIHDHYTCMIDILSR----AGRLEEAKSFINKMPFPPDAIGWATLLSS 453
G D C+ + L R AGR EEA +MP D I W +L++S
Sbjct: 391 MGF----DSVVCVCNTLLRMYAGAGRSEEADLVFKQMP-TKDLISWNSLMAS 437
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 121/466 (25%), Positives = 221/466 (47%), Gaps = 43/466 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGL----GNLSRITFSTMLIMSSSRR 56
MP + VSW L+ G++ G + + +Y M +G+ ++S + S L+ S
Sbjct: 221 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDES-- 278
Query: 57 CVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMIT 116
LGRQI G ++K G S + V + L+ M+ +G + A F+++ E+
Sbjct: 279 ---LGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISER---------- 325
Query: 117 GLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
D+ISW +++ QNG E+ +F MR ++ T
Sbjct: 326 ---------------------DTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTT 364
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
++L+ G + + G+ IH +++ V V + L+ MY + A+ VF+ M
Sbjct: 365 VSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMP 424
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
K+++SW +++ + +G S +A+ I C+M R G + T S +++C + ++G
Sbjct: 425 TKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRI 484
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
HG +V+GL + NALV+ YGK G + S R+ +M RD V+W AL+ GYA+
Sbjct: 485 LHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENED 544
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG-LVEKGRHYFEIMVKEYGIRPIHDHY 415
++ + F+ + G+ + +T++ VLSAC G L+E+G+ +V G
Sbjct: 545 PDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSA-GFESDEHVK 603
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+I + ++ G L ++ N + I W +L++ HG+ E
Sbjct: 604 NSLITMYAKCGDLSSSQDLFNGLD-NRSIITWNAILAANAHHGHGE 648
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 216/454 (47%), Gaps = 39/454 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSWN ++SG G + ++ + M G+ S + S + S
Sbjct: 119 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFRE 178
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+HG + K G S V+V + ++ +Y +Y
Sbjct: 179 GVQVHGFVAKSGLLSDVYVSTAILHLYG----VY-------------------------- 208
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GLV SR++F M D++ +SWT+++ G G E ID+++ MR EG+ ++ + V
Sbjct: 209 -GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLV 267
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+++CG L G+QI +I++ + + V ++L+ M+ ++ YA +F ++ ++
Sbjct: 268 ISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDT 327
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SW +++ Y QNG EE+ +IF M+R E + T+ +++S ++ + G HG
Sbjct: 328 ISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGL 387
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ G S + V N L+ Y G E++ +F +M +D +SW +L++ + G++ +
Sbjct: 388 VVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDA 447
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY---TC 417
+ + M+ G + VT L+AC +KGR ++V + + D+
Sbjct: 448 LGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVV----VSGLFDNQIIGNA 503
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
++ + + G + ++ + +MP D + W L+
Sbjct: 504 LVSMYGKIGGMSTSRRVLLQMP-RRDVVAWNALI 536
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 141/270 (52%), Gaps = 3/270 (1%)
Query: 193 GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
G+ +HA ++ + +V + L++MY K +K A +F M +N VSW M+ G +
Sbjct: 77 GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVR 136
Query: 253 NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASL-EEGTQFHGRSLVTGLISFIT 311
G E ++ F M GI+P F + S++++C S+ EG Q HG +GL+S +
Sbjct: 137 VGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 196
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG 371
VS A++ YG G + S ++F EM R+ VSWT+L+ GY+ G+ E ID+++ M G
Sbjct: 197 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEG 256
Query: 372 LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEA 431
++ +E ++ V+S+C GR ++K G+ +I + G ++ A
Sbjct: 257 VECNENSMSLVISSCGLLKDESLGRQIIGQVIKS-GLESKLAVENSLISMFGNMGNVDYA 315
Query: 432 KSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
N++ D I W +++++ +G++E
Sbjct: 316 NYIFNQIS-ERDTISWNSIVAAYAQNGHIE 344
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 40/216 (18%)
Query: 299 GRSL----VTGLISFITV-SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK 353
GR+L V GL+ + +N L+ Y K G ++ + LF++M VR+EVSW ++SG +
Sbjct: 77 GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVR 136
Query: 354 FGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
G E ++ F+KM G+KP + +++AC R+G F V+ +G
Sbjct: 137 VGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSG------SMFREGVQVHG------ 184
Query: 414 HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL 473
F+ K D +L ++G V + E E+
Sbjct: 185 --------------------FVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFE---EM 221
Query: 474 DPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
N S+ L Y+ KG+ + V + ++MR +GV
Sbjct: 222 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGV 257
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 239/655 (36%), Positives = 375/655 (57%), Gaps = 34/655 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSWN L+SG+ + + +A V+ +M + + ++++ M+ + V
Sbjct: 74 MPERNIVSWNGLVSGYIKNRMIEEARNVFEIMPERNV-----VSWTAMV-----KGYVQE 123
Query: 61 GRQIHGHILKFGFG-----SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
G + +L + S+ + L+D G I DA++ +D +P K++V MI
Sbjct: 124 GMVVEAELLFWRMPERNEVSWTVMFGGLIDG----GRIDDARKLYDMMPGKDVVASTNMI 179
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
GL R G V+E+R +F M++++ I+WTTMITG QN + +D+ R++ +
Sbjct: 180 GGLCREGRVDEAREIFDEMRERNVITWTTMITGYGQN----KRVDVARKLFEVMPEKTEV 235
Query: 176 TFGSVL---TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
++ S+L T G + EE ++ V +A++ + I A VF
Sbjct: 236 SWTSMLLGYTLSGRIEDAEEFFEVMPM-------KPVIACNAMIVALGEVGEIVKARRVF 288
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
M ++ +W M+ Y + G EA+++F MQR G+ P +L S++S CA LASL+
Sbjct: 289 DQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQ 348
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
G Q H + + V++ L+T Y KCG + + +F+ +D + W +++SGYA
Sbjct: 349 YGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYA 408
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
G E + +F +M G P++VTLI +L+ACS G +E+G FE M ++ + P
Sbjct: 409 SHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTV 468
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLE 472
+HY+C +D+L RAG++++A IN M PDA W LL +C+ H +++ + AA+ L E
Sbjct: 469 EHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFE 528
Query: 473 LDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDW 532
++P N Y+LLSSI AS+ KW V+++R+ MR K V K PGCSWI+ +VH+F+
Sbjct: 529 IEPENAGPYILLSSINASRSKWGDVAEMRKNMRTKNVSKFPGCSWIEVGKKVHMFTRGGI 588
Query: 533 SS-PYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLF 591
+ P I LEK + + + GY PD S VLHDV+ EK+ L+ HSE+LA+A+GLL
Sbjct: 589 RNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLK 648
Query: 592 IPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDF 646
+P G+PIRV+KNLRVC DCH A K ISK+T+REI++RDA RFH F NGECSC D+
Sbjct: 649 LPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDY 703
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 196/388 (50%), Gaps = 26/388 (6%)
Query: 76 YVFVGS--PLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRG 133
Y +GS +V Y GL +A++ FDE+PE+NIV +N +++G ++ ++EE+R +F
Sbjct: 45 YKAIGSWNSIVSGYFANGLPREARQMFDEMPERNIVSWNGLVSGYIKNRMIEEARNVFEI 104
Query: 134 MKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEG 193
M +++ +SWT M+ G +Q G+ EA LF M FG ++ GG +++
Sbjct: 105 MPERNVVSWTAMVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFGGLID--GG--RIDDA 160
Query: 194 KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQN 253
++++ + D V + ++ C+ + A +F M +NV++WT M+ GYGQN
Sbjct: 161 RKLYDMMPGKD----VVASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTMITGYGQN 216
Query: 254 GCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITV 312
+ A K+F M ++ + LG +S +E+ +F + +I+
Sbjct: 217 KRVDVARKLFEVMPEKTEVSWTSMLLGYTLS-----GRIEDAEEFFEVMPMKPVIA---- 267
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGL 372
NA++ G+ G I + R+F++M RD +W ++ Y + G E ++LF +M G+
Sbjct: 268 CNAMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGV 327
Query: 373 KPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--TCMIDILSRAGRLEE 430
+P +LI +LS C+ ++ GR +V+ + D Y + ++ + + G L +
Sbjct: 328 RPSFPSLISILSVCATLASLQYGRQVHAHLVR---CQFDGDVYVASVLMTMYVKCGELVK 384
Query: 431 AKSFINKMPFPPDAIGWATLLSSCRIHG 458
AK ++ P D I W +++S HG
Sbjct: 385 AKLVFDRFP-SKDIIMWNSIISGYASHG 411
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/572 (39%), Positives = 338/572 (59%), Gaps = 34/572 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW +I+G G +A+ ++ M +G TFS+ L + ++
Sbjct: 129 MPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVG-CDTYTFSSALKACADSGALNY 187
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR+IH LK GF + FV + L MY K G L
Sbjct: 188 GREIHCQTLKKGFTAVSFVANTLATMYNK--------------------------CGKLD 221
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL RLF M +D +SWTT+I +Q G E A+ FR MR ++ ++FTF +V
Sbjct: 222 YGL-----RLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAV 276
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
++ C L +E G+Q+HA +IR D++ V ++++ MY KC + A +VF+ ++ +++
Sbjct: 277 ISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDI 336
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SW+ M+ GY Q GC EEA M+R G P++F SV+S C N+A LE+G Q H
Sbjct: 337 ISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAH 396
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
L GL V +AL+ Y KCG+I+++ ++F+E + VSWTA+++GYA+ G + E
Sbjct: 397 VLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEA 456
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
IDLF+K+ GL+PD VT I VL+ACS AGLV+ G HYF + K + I P DHY CMID
Sbjct: 457 IDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYGCMID 516
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAGRL +A+S I MPF D + W+TLL +CRIHG+V+ GK AAE +L+LDP +
Sbjct: 517 LLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQLDPNCAVT 576
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
++ L+++YA+KGKW +++R+ M+ KGV K+PG SWIK+K RV F + D S P + I
Sbjct: 577 HITLANMYAAKGKWKEAAEVRKMMKSKGVVKEPGWSWIKFKDRVSAFVSGDRSHPEGEYI 636
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEK 572
Y L+ L + E ++ +M +L++V+ S++
Sbjct: 637 YDVLDLLASQ--AEMHMQEMDFLLNEVQESQR 666
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 183/342 (53%), Gaps = 3/342 (0%)
Query: 112 NTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GL 170
N ++ L++ G + +R+LF M +D ISWTT+I+G + EA+ LF +M +E GL
Sbjct: 5 NLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGL 64
Query: 171 AMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAES 230
MD F L ACG +++ G+ +H + ++ D ++VFVGSALVDMY K +
Sbjct: 65 HMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCI 124
Query: 231 VFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS 290
VF+ M +NVVSWTA++ G + G ++EA+ F +M + D +T S + +CA+ +
Sbjct: 125 VFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGA 184
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
L G + H ++L G + V+N L T Y KCG ++ RLF M RD VSWT ++
Sbjct: 185 LNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMS 244
Query: 351 YAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP 410
+ G+ + F +M + P+E T V+S C+ G +E G +++ G+
Sbjct: 245 NVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRR-GLVD 303
Query: 411 IHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
++ + S+ +L+ A + + D I W+T++S
Sbjct: 304 SLSVANSIMAMYSKCWQLDLASTVFQGLS-RRDIISWSTMIS 344
>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 681
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/635 (35%), Positives = 355/635 (55%), Gaps = 40/635 (6%)
Query: 16 HASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL--GRQIHGHILKFGF 73
H+ GS A++V+ + + + T L +S+ R DL G + G+
Sbjct: 84 HSRRGSPASALRVFRALPPAARPDSTTFT----LALSACARLGDLRGGESVRDRAFDAGY 139
Query: 74 GSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRG 133
VFV S L+ +YA+ G + DA + F +P +
Sbjct: 140 KDDVFVCSSLLHLYARWGAMGDAVKVFVRMPRR--------------------------- 172
Query: 134 MKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEG 193
D ++W+TM+ G + G +AI ++R MR +G+ D+ V+ AC + G
Sbjct: 173 ----DRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMG 228
Query: 194 KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQN 253
+H ++R+ + +V ++LVDMY K + A VF M +N VSW+AM+ G+ QN
Sbjct: 229 ASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQN 288
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF-ITV 312
G S+EA+++F NMQ +GI+PD L S + +C+N+ L+ G HG + F +
Sbjct: 289 GQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHG--FIVRRFDFNCIL 346
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGL 372
A + Y KCG++ + LFN ++ RD + W A+++ G+ + + LF++M G+
Sbjct: 347 GTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGM 406
Query: 373 KPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAK 432
+PD T +LSA S +GLVE+G+ +F MV + I P HY C++D+L+R+G +EEA
Sbjct: 407 RPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEAS 466
Query: 433 SFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKG 492
+ M P W LLS C + +E+G+ A+++LEL P + L+S++YA+
Sbjct: 467 DLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAATK 526
Query: 493 KWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMI 552
KWD V Q+R+ M++ G +K PGCS I+ + H+F +D S P ++I +++ KL+ +M
Sbjct: 527 KWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDLEMR 586
Query: 553 KEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHN 612
K GY+P V HD+E K + L++HSE+LAIAFGLL PG + ++KNLRVC DCH+
Sbjct: 587 KMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGDCHD 646
Query: 613 ATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
A KYISKI REI+VRDA RFH FK+G CSC D+W
Sbjct: 647 AIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 194/393 (49%), Gaps = 51/393 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V+W+ +++G S G DA+++Y M +DG+ + + +++R V +
Sbjct: 169 MPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARN-VRM 227
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +HGH+L+ G V + LVDMYAK GL+ A R F + +N V ++ MI+G +
Sbjct: 228 GASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQ 287
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G +E+ RLFR M+ G+ D S
Sbjct: 288 NGQSDEALRLFRNMQ-------------------------------ASGIQPDSGALVSA 316
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC + L+ G+ +H FI+R N +G+A +DMY KC S+ A+ +F ++ +++
Sbjct: 317 LLACSNIGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDL 375
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+ W AM+ G +G ++A+ +F M G+ PD T S++S+ ++ +EEG + GR
Sbjct: 376 ILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGR 435
Query: 301 SLVTGLISFITVSNA------LVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAK 353
+++ ++ A LV + G +E++ L M V+ W AL+SG
Sbjct: 436 -----MVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLN 490
Query: 354 FGKANETIDLFEKMLSH--GLKPDEVTLIGVLS 384
N+ ++L E + + L+PD+V ++ ++S
Sbjct: 491 ----NKKLELGESIADNILELQPDDVGVLALVS 519
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 142/321 (44%), Gaps = 39/321 (12%)
Query: 195 QIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG-YGQN 253
++HA +I + + + S+L Y + + AES A + ++ ++ + +
Sbjct: 29 RLHALLIVSSSASHTLI-SSLAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHSRR 87
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVS 313
G A+++F + PD T +S+CA L L G R+ G + V
Sbjct: 88 GSPASALRVFRALP-PAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVC 146
Query: 314 NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLK 373
++L+ Y + G + D+ ++F M RD V+W+ +V+G+ G+ + I ++ +M G+K
Sbjct: 147 SSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVK 206
Query: 374 PDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKS 433
DEV +IGV+ AC+ A V G +++ +G+R T ++D+ ++ G L+ A
Sbjct: 207 GDEVVMIGVIQACTAARNVRMGASVHGHLLR-HGMRMDVVTATSLVDMYAKNGLLDVA-- 263
Query: 434 FINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGK 493
CR+ G + N S+ + S +A G+
Sbjct: 264 --------------------CRVFG-------------LMVHRNDVSWSAMISGFAQNGQ 290
Query: 494 WDHVSQLRRTMREKGVRKDPG 514
D +L R M+ G++ D G
Sbjct: 291 SDEALRLFRNMQASGIQPDSG 311
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/516 (41%), Positives = 323/516 (62%), Gaps = 6/516 (1%)
Query: 138 DSISWTTMITGLMQNGLER-EAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQI 196
D+ + T+I Q + A+ + MR ++ ++FTF VL AC G++ LE G +
Sbjct: 190 DAFLFNTLIRAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAV 249
Query: 197 HAFIIRNDHKDNVFVGSALVDMYCKC-----KSIKYAESVFRTMAWKNVVSWTAMLVGYG 251
HA +++ +++ V + LV MYC C A+ VF K+ V+W+AM+ GY
Sbjct: 250 HASMVKFGFEEDPHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESPVKDSVTWSAMIGGYA 309
Query: 252 QNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFIT 311
+ G S AV +F MQ G+ PD+ T+ SV+S+CA+L +LE G ++ +
Sbjct: 310 RAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRSVE 369
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG 371
+ NAL+ + KCG+++ + ++F EM VR VSWT+++ G A G+ E + +F++M+ G
Sbjct: 370 LCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQG 429
Query: 372 LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEA 431
+ PD+V IGVLSACS +GLV+KG +YF M + I P +HY CM+D+LSRAGR+ EA
Sbjct: 430 VDPDDVAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNEA 489
Query: 432 KSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASK 491
F+ MP P+ + W +++++C G +++G+ A+ L+ +P + ++YVLLS+IYA
Sbjct: 490 LEFVRAMPVEPNQVIWRSIVTACHARGELKLGESVAKELIRREPSHESNYVLLSNIYAKL 549
Query: 492 GKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKM 551
+W+ +++R M KG+RK PG + I+ + ++ F A D S +IY +E++ R++
Sbjct: 550 LRWEKKTKVREMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHDQYKEIYEMVEEMGREI 609
Query: 552 IKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCH 611
+ GYVP S VL D++ +K L HSEKLAIAF LL PPG PIR+VKNLRVC DCH
Sbjct: 610 KRAGYVPTTSQVLLDIDEEDKEDALYRHSEKLAIAFALLSTPPGTPIRIVKNLRVCEDCH 669
Query: 612 NATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ATK+ISK+ REI+VRD RFH FKNG CSCGDFW
Sbjct: 670 SATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 705
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 112/261 (42%), Gaps = 46/261 (17%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P D V+W+ +I G+A G+ AV ++ M G+ IT ++L + ++LG
Sbjct: 294 PVKDSVTWSAMIGGYARAGNSARAVTLFREMQVTGVCP-DEITMVSVLSACADLGALELG 352
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+ + +I + V + + L+DM+AK G
Sbjct: 353 KWLESYIERKNIMRSVELCNALIDMFAKCGD----------------------------- 383
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
V+ + ++FR MK + +SWT+MI GL +G EA+ +F EM +G+ D F VL
Sbjct: 384 --VDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAFIGVL 441
Query: 182 TACGGLLALEEG-------KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
+AC +++G + + + + + +H +VDM + + A R
Sbjct: 442 SACSHSGLVDKGHYYFNTMENMFSIVPKIEHY------GCMVDMLSRAGRVNEALEFVRA 495
Query: 235 MAWK-NVVSWTAMLVGYGQNG 254
M + N V W +++ G
Sbjct: 496 MPVEPNQVIWRSIVTACHARG 516
>gi|7488184|pir||E71401 probable selenium-binding protein - Arabidopsis thaliana
Length = 1070
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/548 (41%), Positives = 334/548 (60%), Gaps = 49/548 (8%)
Query: 134 MKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG-LAMDQFTFGSVLTACGGLLALEE 192
M +D I+W +++T L Q L + + +F + L D F F +++ AC L +++
Sbjct: 1 MPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDH 60
Query: 193 GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
G+Q+H I +++ ++ V S+LVDMY KC + A++VF ++ KN +SWTAM+ GY +
Sbjct: 61 GRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAK 120
Query: 253 NGCSEEAVK-------------------------------IFCNMQRNGIEP-DDFTLGS 280
+G EEA++ +F M+R ++ D L S
Sbjct: 121 SGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSS 180
Query: 281 VISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD 340
++ +CANLA+ G Q HG NAL+ Y KC ++ + +F+ M RD
Sbjct: 181 IVGACANLAASIAGRQVHG--------------NALIDMYAKCSDVIAAKDIFSRMRHRD 226
Query: 341 EVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
VSWT+L+ G A+ G+A + + L++ M+SHG+KP+EVT +G++ ACS G VEKGR F+
Sbjct: 227 VVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQ 286
Query: 401 IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
M K+YGIRP HYTC++D+L R+G L+EA++ I+ MPFPPD WA LLS+C+ G
Sbjct: 287 SMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRG 346
Query: 461 EIGKWAAESLL-ELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIK 519
++G A+ L+ +P++Y+LLS+IYAS W VS+ RR + E VRKDPG S ++
Sbjct: 347 QMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVE 406
Query: 520 YKSRVHIFSADDWSSPYSDQIYAELEKLNRKM-IKEGYVPDMSSVLHDVELSEKIKMLNH 578
+ +F A + S P + I+ L+KL +M I+ GYVPD S +LHD++ EK K+L
Sbjct: 407 VRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFW 466
Query: 579 HSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKN 638
HSE+ A+A+GLL PG PIR+VKNLRVC DCH K+IS+IT+REI+VRDA R+H FK
Sbjct: 467 HSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKG 526
Query: 639 GECSCGDF 646
G+CSC DF
Sbjct: 527 GKCSCNDF 534
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 192/358 (53%), Gaps = 20/358 (5%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
FS ++ ++ +D GRQ+H H + + + V S LVDMYAK GL+ AK FD +
Sbjct: 45 FSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIR 104
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
KN + + M++G + G EE+ LFR + K+ SWT +I+G +Q+G EA +F E
Sbjct: 105 VKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTE 164
Query: 165 MRLEGL-AMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
MR E + +D S++ AC L A G+Q+H G+AL+DMY KC
Sbjct: 165 MRRERVDILDPLVLSSIVGACANLAASIAGRQVH--------------GNALIDMYAKCS 210
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
+ A+ +F M ++VVSWT+++VG Q+G +E+A+ ++ +M +G++P++ T +I
Sbjct: 211 DVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIY 270
Query: 284 SCANLASLEEGTQ-FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDE 341
+C+++ +E+G + F + G+ + L+ G+ G ++++ L + M DE
Sbjct: 271 ACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDE 330
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLI---GVLSACSRAGLVEKGR 396
+W AL+S + G+ I + + ++S D T I + ++ S G V + R
Sbjct: 331 PTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEAR 388
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/522 (40%), Positives = 323/522 (61%), Gaps = 1/522 (0%)
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+R LF M + D + + +M G + E LF E+ +G+ D +TF S+L AC
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
ALEEG+Q+H ++ DNV+V L++MY +C+ + A VF + VV + AM
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNAM 201
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ GY + EA+ +F MQ ++P++ TL SV+SSCA L SL+ G H +
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
++ V+ AL+ + KCG+++D+ +F +M +D +W+A++ YA GKA +++ +FE+
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFER 321
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M S ++PDE+T +G+L+ACS G VE+GR YF MV ++GI P HY M+D+LS AG
Sbjct: 322 MRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSXAG 381
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
LE+A FI+K+P P + W LL++C H N+++ + +E + ELD + YV+LS+
Sbjct: 382 NLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSN 441
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
+YA KW++V LR+ M+++ K PGCS I+ + VH F + D + +++ L++
Sbjct: 442 LYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDE 501
Query: 547 LNRKMIKEGYVPDMSSVLH-DVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
+ +++ GYVPD S V+H ++ EK L +HSEKLAI FGLL PPG IRVVKNLR
Sbjct: 502 MVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLR 561
Query: 606 VCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VC DCHNA K IS I R+++ RD RFH F++G+CSCGDFW
Sbjct: 562 VCRDCHNAAKLISLIFGRKVVXRDVQRFHHFEDGKCSCGDFW 603
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 184/365 (50%), Gaps = 38/365 (10%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V +N + G++ + + ++ +L+DG+ TF ++L + + ++ GRQ+
Sbjct: 93 DIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILP-DNYTFPSLLKACAVAKALEEGRQL 151
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +K G V+V L++MY + + A+ FD + E +V YN M
Sbjct: 152 HCLSMKLGLDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNAM---------- 201
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
ITG + EA+ LFREM+ + L ++ T SVL++C
Sbjct: 202 ---------------------ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSC 240
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L +L+ GK IH + ++ V V +AL+DM+ KC S+ A S+F M +K+ +W+
Sbjct: 241 ALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWS 300
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
AM+V Y +G +E+++ +F M+ ++PD+ T ++++C++ +EEG ++ + +
Sbjct: 301 AMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSK 360
Query: 305 -GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKANETID 362
G++ I ++V GN+ED++ +++ + + W L++ + ++ +D
Sbjct: 361 FGIVPSIKHYGSMVDLLSXAGNLEDAYEFIDKLPISPTPMLWRILLAACS----SHNNLD 416
Query: 363 LFEKM 367
L EK+
Sbjct: 417 LAEKV 421
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 146/276 (52%), Gaps = 6/276 (2%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC---KSIKYAESVFRTMAWKNVVSWTA 245
+L E QI A+ I++ +D FV L++ + S+ YA +F M+ ++V + +
Sbjct: 41 SLRELMQIQAYAIKSHIEDVSFVAK-LINFCTESPTESSMSYARHLFEAMSEPDIVIFNS 99
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
M GY + E +F + +GI PD++T S++ +CA +LEEG Q H S+ G
Sbjct: 100 MARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLG 159
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
L + V L+ Y +C +++ + +F+ + V + A+++GYA+ + NE + LF
Sbjct: 160 LDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFR 219
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
+M LKP+E+TL+ VLS+C+ G ++ G+ + K++ T +ID+ ++
Sbjct: 220 EMQGKYLKPNEITLLSVLSSCALLGSLDLGK-WIHKYAKKHSFCKYVKVNTALIDMFAKC 278
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
G L++A S KM + D W+ ++ + HG E
Sbjct: 279 GSLDDAVSIFEKMRY-KDTQAWSAMIVAYANHGKAE 313
Score = 38.9 bits (89), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + D +W+ +I +A+HG ++ ++ M + + ITF +L S V+
Sbjct: 291 MRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENV-QPDEITFLGLLNACSHTGRVEE 349
Query: 61 GRQIHGHIL-KFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
GR+ ++ KFG + +VD+ + G + DA D+LP
Sbjct: 350 GRKYFSQMVSKFGIVPSIKHYGSMVDLLSXAGNLEDAYEFIDKLP 394
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 254/711 (35%), Positives = 379/711 (53%), Gaps = 114/711 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P SWN ++S + DA L+L D + + ++F+ M
Sbjct: 47 LPQRTIASWNAMVSAYFESHKPRDA-----LLLFDQMPQRNTVSFNGM------------ 89
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+ Y K G++ DA++ FD +PE+N+V + +M+ G ++
Sbjct: 90 -----------------------ISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQ 126
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G+VEE+ +LF M ++ +SWT MI GL++ +A LF + + + + V
Sbjct: 127 EGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDVVV-------V 179
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHK-DNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
GG + G+ A + ++ K NVF + +V Y K + A +F M +N
Sbjct: 180 TNMIGGYCQV--GRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERN 237
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIF----------CN------------------------ 265
VSWTAML+GY Q+G +EA ++F CN
Sbjct: 238 EVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKE 297
Query: 266 ------------MQRNGIEPDDFTL-------------GSVIS---SCANLASLEEGTQF 297
+R G++ + L S+IS CA+LASL+ G Q
Sbjct: 298 RDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQV 357
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H R + + + V++ L+T Y KCG++ + +FN +D V W ++++GY++ G
Sbjct: 358 HARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLG 417
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
E +++F M S G++PDEVT IGVLSACS +G V++G FE M Y + P +HY C
Sbjct: 418 EEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYAC 477
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
M+D+L RAGR++EA + KMP PDAI W LL +CR H +++ + A E L +L+P N
Sbjct: 478 MVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEPKN 537
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFS-ADDWSSPY 536
YVLLS +YA+KG+W V LR+ + + V K PGCSWI+ + +VH+F+ D S P
Sbjct: 538 AGPYVLLSHMYATKGRWRDVEVLRKKINRR-VIKFPGCSWIEVEKKVHMFTGGDSKSHPE 596
Query: 537 SDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGL 596
I LEKL+ + + GY PD S VLHDV+ EK L +HSE+LA+A+GLL +P G+
Sbjct: 597 QHMITQMLEKLSGFLREAGYCPDGSFVLHDVDEEEKTHSLGYHSERLAVAYGLLKVPEGM 656
Query: 597 PIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
PIRV+KNLRVC DCH+A K I+K+T REI++RDA RFH FK+G CSC DFW
Sbjct: 657 PIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGSCSCKDFW 707
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 183/409 (44%), Gaps = 53/409 (12%)
Query: 84 VDMYAKLGLIYDAKRGFDE--LPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSIS 141
+ Y ++G I++A++ FD LP++ I +N M++ ++ LF M ++++S
Sbjct: 26 ISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQRNTVS 85
Query: 142 WTTMITGLMQNGL---EREAIDLFREMRL------------EGLA---------MDQFTF 177
+ MI+G ++NG+ R+ D+ E + EG+ M +
Sbjct: 86 FNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNV 145
Query: 178 GSVLTACGGLLA---LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
S GGLL +++ K++ I D V V + ++ YC+ + A +F
Sbjct: 146 VSWTVMIGGLLKESRIDDAKKLFDMIPEKD----VVVVTNMIGGYCQVGRLDEARELFDE 201
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEE 293
M +NV +WT M+ GY +NG + A K+F M +RN + +G S
Sbjct: 202 MKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQS---------- 251
Query: 294 GTQFHGRSLVTGL-ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
G L + + +I N ++ +G G + + +F M RDE +W A++ +
Sbjct: 252 GRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFE 311
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK-EYGIRPI 411
+ G E + LF +M G+ + ++I VLS C+ ++ GR +V+ E+
Sbjct: 312 RKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFD---- 367
Query: 412 HDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
D Y + +I + + G L AK N+ F D + W ++++ HG
Sbjct: 368 QDLYVASVLITMYVKCGDLVRAKGIFNRFLF-KDVVMWNSMITGYSQHG 415
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/675 (34%), Positives = 364/675 (53%), Gaps = 60/675 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D V+W ++I G+A G N+++ ++ M ++G+ ++ T++ + +
Sbjct: 219 MQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVP-DKVAMVTVVFACAKLGAMHK 277
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
R I +I + F V +G+ ++DMYAK G + A+ FD + EKN++
Sbjct: 278 ARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVI----------- 326
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SW+ MI +G R+A+DLFR M G+ D+ T S+
Sbjct: 327 --------------------SWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASL 366
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L + +Q+HA + N+ V + LV Y +++ A +F M ++
Sbjct: 367 LYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDS 426
Query: 241 VSWTAMLVGYGQNG----C------------------------SEEAVKIFCNMQRNGIE 272
VSW+ M+ G+ + G C + E++ +F M+ G+
Sbjct: 427 VSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVV 486
Query: 273 PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRL 332
PD + +V+ +CA L ++ + + + A++ + KCG +E + +
Sbjct: 487 PDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREI 546
Query: 333 FNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLV 392
F+ M ++ +SW+A+++ Y G+ + +DLF ML G+ P+++TL+ +L ACS AGLV
Sbjct: 547 FDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLV 606
Query: 393 EKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
E+G +F +M ++Y +R HYTC++D+L RAGRL+EA I M D W L
Sbjct: 607 EEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLG 666
Query: 453 SCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKD 512
+CR H +V + + AA SLLEL P NP Y+LLS+IYA+ G+W+ V++ R M ++ ++K
Sbjct: 667 ACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKI 726
Query: 513 PGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEK 572
PG +WI+ ++ H FS D + P S +IY L+ L K+ GYVPD + VLHDV+ K
Sbjct: 727 PGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELK 786
Query: 573 IKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVR 632
I +L HSEKLAIAFGL+ P PIR++KNLRVC DCH K +S IT R I+VRDA R
Sbjct: 787 IGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANR 846
Query: 633 FHLFKNGECSCGDFW 647
FH FK G CSCGD+W
Sbjct: 847 FHHFKEGACSCGDYW 861
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 203/365 (55%), Gaps = 32/365 (8%)
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
+E++R LF M+++D ++WT MI G + G E++ LF +MR EG+ D+ +V+ A
Sbjct: 209 IEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFA 268
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C L A+ + + I +I R + +V +G+A++DMY KC ++ A +F M KNV+SW
Sbjct: 269 CAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISW 328
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
+AM+ YG +G +A+ +F M +G+ PD TL S++ +C N +L + Q H ++ V
Sbjct: 329 SAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASV 388
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF--------- 354
G++ + V+N LV FY ++D++ LF+ M VRD VSW+ +V G+AK
Sbjct: 389 HGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGT 448
Query: 355 -------------------GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG 395
G ANE++ LF+KM G+ PD+V ++ V+ AC++ G + K
Sbjct: 449 FRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKA 508
Query: 396 RHYFE-IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
R + I K++ + I T MID+ ++ G +E A+ ++M + I W+ ++++
Sbjct: 509 RTIDDYIQRKKFQLDVILG--TAMIDMHAKCGCVESAREIFDRME-EKNVISWSAMIAAY 565
Query: 455 RIHGN 459
HG
Sbjct: 566 GYHGQ 570
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 143/281 (50%), Gaps = 21/281 (7%)
Query: 106 KNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM 165
+NIV+ N +I ++++ LF GM +DS+SW+ M+ G + G FRE+
Sbjct: 111 ENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFREL 170
Query: 166 RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI 225
G D +T V+ AC L L+ ALVDMY KC+ I
Sbjct: 171 IRCGARPDNYTLPFVIRACRDLKNLQ---------------------MALVDMYVKCREI 209
Query: 226 KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
+ A +F M +++V+WT M+ GY + G + E++ +F M+ G+ PD + +V+ +C
Sbjct: 210 EDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFAC 269
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
A L ++ + + + A++ Y KCG +E + +F+ M ++ +SW+
Sbjct: 270 AKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWS 329
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSAC 386
A+++ Y G+ + +DLF MLS G+ PD++TL +L AC
Sbjct: 330 AMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYAC 370
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 143/271 (52%), Gaps = 25/271 (9%)
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
L + +Q+HA + +N+ V + L+ Y +++ A +F M ++ VSW+ M+ G
Sbjct: 94 LTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGG 153
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
+ + G F + R G PD++TL VI +C +L +L+
Sbjct: 154 FAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQM---------------- 197
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
ALV Y KC IED+ LF++M RD V+WT ++ GYA+ GKANE++ LFEKM
Sbjct: 198 -----ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMRE 252
Query: 370 HGLKPDEVTLIGVLSACSRAGLVEKGRHYFE-IMVKEYGIRPIHDHYTCMIDILSRAGRL 428
G+ PD+V ++ V+ AC++ G + K R + I K++ + I T MID+ ++ G +
Sbjct: 253 EGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILG--TAMIDMYAKCGCV 310
Query: 429 EEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
E A+ ++M + I W+ ++++ HG
Sbjct: 311 ESAREIFDRME-EKNVISWSAMIAAYGYHGQ 340
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 90/190 (47%), Gaps = 29/190 (15%)
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE 341
IS+ N +L + Q H ++ V G++ I V+N L+ FY ++D++ LF+ M VRD
Sbjct: 85 ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 144
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEI 401
VSW+ +V G+AK G F +++ G +PD TL V+ AC
Sbjct: 145 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRAC--------------- 189
Query: 402 MVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
R + + ++D+ + +E+A+ +KM D + W + I G E
Sbjct: 190 -------RDLKNLQMALVDMYVKCREIEDARFLFDKMQ-ERDLVTWTVM-----IGGYAE 236
Query: 462 IGKWAAESLL 471
GK A ESL+
Sbjct: 237 CGK-ANESLV 245
>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
Length = 787
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/635 (35%), Positives = 355/635 (55%), Gaps = 40/635 (6%)
Query: 16 HASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL--GRQIHGHILKFGF 73
H+ GS A++V+ + + + T L +S+ R DL G + G+
Sbjct: 84 HSRRGSPASALRVFRALPPAARPDSTTFT----LALSACARLGDLRGGESVRDRAFDAGY 139
Query: 74 GSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRG 133
VFV S L+ +YA+ G + DA + F +P +
Sbjct: 140 KDDVFVCSSLLHLYARWGAMGDAVKVFVRMPRR--------------------------- 172
Query: 134 MKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEG 193
D ++W+TM+ G + G +AI ++R MR +G+ D+ V+ AC + G
Sbjct: 173 ----DRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMG 228
Query: 194 KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQN 253
+H ++R+ + +V ++LVDMY K + A VF M +N VSW+AM+ G+ QN
Sbjct: 229 ASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQN 288
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF-ITV 312
G S+EA+++F NMQ +GI+PD L S + +C+N+ L+ G HG + F +
Sbjct: 289 GQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHG--FIVRRFDFNCIL 346
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGL 372
A + Y KCG++ + LFN ++ RD + W A+++ G+ + + LF++M G+
Sbjct: 347 GTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGM 406
Query: 373 KPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAK 432
+PD T +LSA S +GLVE+G+ +F MV + I P HY C++D+L+R+G +EEA
Sbjct: 407 RPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEAS 466
Query: 433 SFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKG 492
+ M P W LLS C + +E+G+ A+++LEL P + L+S++YA+
Sbjct: 467 DLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAATK 526
Query: 493 KWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMI 552
KWD V Q+R+ M++ G +K PGCS I+ + H+F +D S P ++I +++ KL+ +M
Sbjct: 527 KWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDLEMR 586
Query: 553 KEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHN 612
K GY+P V HD+E K + L++HSE+LAIAFGLL PG + ++KNLRVC DCH+
Sbjct: 587 KMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGDCHD 646
Query: 613 ATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
A KYISKI REI+VRDA RFH FK+G CSC D+W
Sbjct: 647 AIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 194/393 (49%), Gaps = 51/393 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V+W+ +++G S G DA+++Y M +DG+ + + +++R V +
Sbjct: 169 MPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARN-VRM 227
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +HGH+L+ G V + LVDMYAK GL+ A R F + +N V ++ MI+G +
Sbjct: 228 GASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQ 287
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G +E+ RLFR M+ G+ D S
Sbjct: 288 NGQSDEALRLFRNMQ-------------------------------ASGIQPDSGALVSA 316
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC + L+ G+ +H FI+R N +G+A +DMY KC S+ A+ +F ++ +++
Sbjct: 317 LLACSNIGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDL 375
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+ W AM+ G +G ++A+ +F M G+ PD T S++S+ ++ +EEG + GR
Sbjct: 376 ILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGR 435
Query: 301 SLVTGLISFITVSNA------LVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAK 353
+++ ++ A LV + G +E++ L M V+ W AL+SG
Sbjct: 436 -----MVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLN 490
Query: 354 FGKANETIDLFEKMLSH--GLKPDEVTLIGVLS 384
N+ ++L E + + L+PD+V ++ ++S
Sbjct: 491 ----NKKLELGESIADNILELQPDDVGVLALVS 519
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 142/321 (44%), Gaps = 39/321 (12%)
Query: 195 QIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG-YGQN 253
++HA +I + + + S+L Y + + AES A + ++ ++ + +
Sbjct: 29 RLHALLIVSSSASHTLI-SSLAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHSRR 87
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVS 313
G A+++F + PD T +S+CA L L G R+ G + V
Sbjct: 88 GSPASALRVFRALP-PAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVC 146
Query: 314 NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLK 373
++L+ Y + G + D+ ++F M RD V+W+ +V+G+ G+ + I ++ +M G+K
Sbjct: 147 SSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVK 206
Query: 374 PDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKS 433
DEV +IGV+ AC+ A V G +++ +G+R T ++D+ ++ G L+ A
Sbjct: 207 GDEVVMIGVIQACTAARNVRMGASVHGHLLR-HGMRMDVVTATSLVDMYAKNGLLDVA-- 263
Query: 434 FINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGK 493
CR+ G + N S+ + S +A G+
Sbjct: 264 --------------------CRVFG-------------LMVHRNDVSWSAMISGFAQNGQ 290
Query: 494 WDHVSQLRRTMREKGVRKDPG 514
D +L R M+ G++ D G
Sbjct: 291 SDEALRLFRNMQASGIQPDSG 311
>gi|224119910|ref|XP_002318193.1| predicted protein [Populus trichocarpa]
gi|222858866|gb|EEE96413.1| predicted protein [Populus trichocarpa]
Length = 533
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/529 (42%), Positives = 324/529 (61%), Gaps = 4/529 (0%)
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQFTFGSV 180
GL + R++F M KD + WT MIT Q EA+ LF++M+ E GL D SV
Sbjct: 6 GLFVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSIAVVSV 65
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+A G L ++ +H + R + + VG++++ M+ KC + + A VF M ++V
Sbjct: 66 ASAVGQLGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMMMERDV 125
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SW +ML GY QNG + EA+ +F M+ + +P T ++S+CA L G +FH
Sbjct: 126 ISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGRKFHDF 185
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM--NVRDEVSWTALVSGYAKFGKAN 358
+ + + +SNAL+ Y KCG++E + LFN + R+ SW L+SGY G
Sbjct: 186 IVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYGMHGHGK 245
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
E ++LF +M G++P+ T +LSACS AGL+++GR F M K + H+ C+
Sbjct: 246 EALELFSRMQEEGVEPNHFTFTSILSACSHAGLIDEGRKCFAEM-KRLSVTLEDKHHACV 304
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
+D+L RAG L+EA I +MP PP W LL +C+IHGN+E+GK AA +LL+L+P +
Sbjct: 305 VDMLGRAGLLQEAFDLIKEMPSPPSDGVWGALLLACKIHGNMELGKTAASNLLQLEPNHT 364
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
YVL+S+IYA+ KW V +LR+ M+ KG++K S I+Y + F D +PY
Sbjct: 365 GYYVLMSNIYAASNKWKEVWKLRQDMKNKGLKKPAAFSMIEYGKDILGFHTADQENPYRH 424
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
++Y ++E L +M GYVPD+S LHDVE +K +MLN+HSEKLA+AFG+L I PG+ I
Sbjct: 425 EVYKKMESLAIEMKMAGYVPDLSCALHDVEEEDKERMLNYHSEKLAVAFGVLKIDPGMVI 484
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RV KNLRVC+DCH+A KYIS I QR+I+VRDA RFH F+ G CSC D+W
Sbjct: 485 RVTKNLRVCNDCHSAFKYISHIYQRKIIVRDANRFHHFQGGTCSCKDYW 533
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 141/276 (51%), Gaps = 8/276 (2%)
Query: 218 MYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR-NGIEPDDF 276
MY KC +F M+ K++V WTAM+ Y Q EEA+ +F MQ+ G+ D
Sbjct: 1 MYAKCGLFVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSI 60
Query: 277 TLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
+ SV S+ L ++ HG + LI + V N+++ + KCGN E + +F+ M
Sbjct: 61 AVVSVASAVGQLGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMM 120
Query: 337 NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR 396
RD +SW +++SGY + G+A E + LF++M +P VT + ++SAC+ G GR
Sbjct: 121 MERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGR 180
Query: 397 HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM-PFPPDAIGWATLLSSCR 455
+ + +V + + + ++D+ ++ G LE+A N + P +A W L+S
Sbjct: 181 KFHDFIV-DSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYG 239
Query: 456 IHGNVEIGKWAAE--SLLELDPYNPASYVLLSSIYA 489
+HG+ GK A E S ++ + P + S + A
Sbjct: 240 MHGH---GKEALELFSRMQEEGVEPNHFTFTSILSA 272
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 239/652 (36%), Positives = 368/652 (56%), Gaps = 41/652 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D SWN +I+ A G +A+ ++ M K L +R +F + SS + G+Q
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYP-TRSSFPCAIKACSSLFDIFSGKQT 98
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H FG+ S +FV S L IVMY+T G +
Sbjct: 99 HQQAFVFGYQSDIFVSSAL------------------------IVMYSTC-------GKL 127
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE------GLAMDQFTFG 178
E++R++F + +D +SWT+MI G NG +A+ LF+++ ++ + +D
Sbjct: 128 EDARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLV 187
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS--IKYAESVFRTMA 236
SV++AC + A + IH+F+I+ V VG+ L+D Y K + A +F +
Sbjct: 188 SVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIV 247
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEP-DDFTLGSVISSCANLASLEEGT 295
K+ VS+ +++ Y Q+G S EA ++F + +N + + TL +V+ + ++ +L G
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGK 307
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
H + + GL + V +++ Y KCG +E + + F+ M ++ SWTA+++GY G
Sbjct: 308 CIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHG 367
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
A + ++LF M+ G++P+ +T + VL+ACS AGL +G +F M +G+ P +HY
Sbjct: 368 HAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHY 427
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
CM+D+L RAG L++A I +M PD+I W++LL++CRIH NVE+ + + L ELD
Sbjct: 428 GCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDS 487
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSP 535
N Y+LLS IYA G+W V ++R M+ +G+ K PG S ++ VH+F D P
Sbjct: 488 SNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHP 547
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
++IY L +LNRK+++ GYV + SSV HDV+ EK L HSEKLAIAFG++ PG
Sbjct: 548 QREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPG 607
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ VVKNLRVCSDCHN K ISKI RE +VRDA RFH FK+G CSCGD+W
Sbjct: 608 STVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 181/360 (50%), Gaps = 41/360 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCV-- 58
+P D VSW +I G+ +G+ DAV ++ +L D + + +M ++S C
Sbjct: 137 IPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRV 196
Query: 59 ---DLGRQIHGHILKFGFGSYVFVGSPLVDMYAK--LGLIYDAKRGFDELPEKNIVMYNT 113
L IH ++K GF V VG+ L+D YAK G + A++ FD++ +K+ V YN
Sbjct: 197 PAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYN- 255
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAM 172
++++ Q+G+ EA ++FR + + + +
Sbjct: 256 ------------------------------SIMSVYAQSGMSNEAFEVFRRLVKNKVVTF 285
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
+ T +VL A AL GK IH +IR +D+V VG++++DMYCKC ++ A F
Sbjct: 286 NAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAF 345
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
M KNV SWTAM+ GYG +G + +A+++F M +G+ P+ T SV+++C++
Sbjct: 346 DRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHV 405
Query: 293 EGTQ-FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
EG + F+ G+ + +V G+ G ++ ++ L M ++ D + W++L++
Sbjct: 406 EGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/600 (36%), Positives = 356/600 (59%), Gaps = 36/600 (6%)
Query: 42 RITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFD 101
R ++T+L + + + GR +H HIL+ F + +G+ L++MYAK
Sbjct: 60 RRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC----------- 108
Query: 102 ELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDL 161
G +EE+R++F M +D ++WTT+I+G Q+ +A+
Sbjct: 109 --------------------GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLF 148
Query: 162 FREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK 221
F +M G + ++FT SV+ A G Q+H F ++ NV VGSAL+D+Y +
Sbjct: 149 FNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTR 208
Query: 222 CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
+ A+ VF + +N VSW A++ G+ + +E+A+++F M R+G P F+ S+
Sbjct: 209 YGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASL 268
Query: 282 ISSCANLASLEEGTQFHGRSLVTG--LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
+C++ LE+G H + +G L++F N L+ Y K G+I D+ ++F+ + R
Sbjct: 269 FGACSSTGFLEQGKWVHAYMIKSGEKLVAF--AGNTLLDMYAKSGSIHDARKIFDRLAKR 326
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
D VSW +L++ YA+ G E + FE+M G++P+E++ + VL+ACS +GL+++G HY+
Sbjct: 327 DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYY 386
Query: 400 EIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
E+M K+ GI P HY ++D+L RAG L A FI +MP P A W LL++CR+H N
Sbjct: 387 ELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKN 445
Query: 460 VEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIK 519
E+G +AAE + ELDP +P +V+L +IYAS G+W+ +++R+ M+E GV+K+P CSW++
Sbjct: 446 TELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVE 505
Query: 520 YKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHH 579
++ +H+F A+D P ++I + E++ K+ + GYVPD S V+ V+ E+ L +H
Sbjct: 506 IENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYH 565
Query: 580 SEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNG 639
SEK+A+AF LL PPG I + KN+RVC DCH A K SK+ REI+VRD RFH FK+
Sbjct: 566 SEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDA 625
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 181/351 (51%), Gaps = 33/351 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V+W LISG++ H DA+ +N ML+ G + T S+++ +++ R
Sbjct: 121 MPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSP-NEFTLSSVIKAAAAERRGCC 179
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+HG +K GF S V VGS L+D+Y R
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYT-------------------------------R 208
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL+++++ +F ++ ++ +SW +I G + +A++LF+ M +G F++ S+
Sbjct: 209 YGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASL 268
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
AC LE+GK +HA++I++ K F G+ L+DMY K SI A +F +A ++V
Sbjct: 269 FGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDV 328
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW ++L Y Q+G +EAV F M+R GI P++ + SV+++C++ L+EG ++
Sbjct: 329 VSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYEL 388
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSG 350
G++ +V G+ G++ + R EM + + W AL++
Sbjct: 389 MKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 439
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 167/306 (54%), Gaps = 4/306 (1%)
Query: 167 LEG--LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
LEG + D+ + ++L C L +G+ +HA I+++ + ++ +G+ L++MY KC S
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
++ A VF M ++ V+WT ++ GY Q+ +A+ F M R G P++FTL SVI +
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
A G Q HG + G S + V +AL+ Y + G ++D+ +F+ + R++VSW
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
AL++G+A+ + ++LF+ ML G +P + + ACS G +E+G+ M+K
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
G + + ++D+ +++G + +A+ +++ D + W +LL++ HG +
Sbjct: 291 S-GEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQHGFGKEAV 348
Query: 465 WAAESL 470
W E +
Sbjct: 349 WWFEEM 354
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 114/246 (46%), Gaps = 14/246 (5%)
Query: 265 NMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCG 324
+++ + I D +++ C L +G H L + I + N L+ Y KCG
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 325 NIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVL- 383
++E++ ++F +M RD V+WT L+SGY++ + + + F +ML G P+E TL V+
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169
Query: 384 -SACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPP 442
+A R G H F + + G + ++D+ +R G +++A+ + +
Sbjct: 170 AAAAERRGCCGHQLHGFCV---KCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRN 226
Query: 443 DAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA--SYVLL-----SSIYASKGKWD 495
D + W L++ E + +L D + P+ SY L S+ + +GKW
Sbjct: 227 D-VSWNALIAGHARRSGTEKALELFQGMLR-DGFRPSHFSYASLFGACSSTGFLEQGKWV 284
Query: 496 HVSQLR 501
H ++
Sbjct: 285 HAYMIK 290
>gi|302788574|ref|XP_002976056.1| hypothetical protein SELMODRAFT_104474 [Selaginella moellendorffii]
gi|300156332|gb|EFJ22961.1| hypothetical protein SELMODRAFT_104474 [Selaginella moellendorffii]
Length = 665
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/658 (36%), Positives = 382/658 (58%), Gaps = 14/658 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+ F + SW+++I +G A+++Y+ M G+ L + ++ SS +D
Sbjct: 11 IEFPNIFSWSIIIGACVDNGLARRALELYHWMDHQGV-RLDMVVLINLVSACSSLGSLDH 69
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITGLL 119
GR + I GF + V + L++MY K G + DA++ F ++ ++++V + MI+G
Sbjct: 70 GRALEARITSMGFHLHPVVRNSLLNMYCKAGSVGDARKFFQDMAGDQSVVSWTAMISGFA 129
Query: 120 RRGLVEESRRLFRGMKDK----DSISWTTMI---TGLMQNGLEREAIDLFREMRLEGLAM 172
G + + FR M + + +++ +++ GL+ +A+ LFR M LEG
Sbjct: 130 LHGREDLALDFFRKMVAEGVRPNEVTFVSILGACAAARDQGLDEQALRLFRVMDLEGHTP 189
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
D+ T + L AC L L GK++H I+ + D+ V ++L++MY KC + A VF
Sbjct: 190 DEVTLVAALEACSNLNLLAAGKKLHELIL-DAGLDSSIVRNSLLNMYGKCGGLDEARRVF 248
Query: 233 -RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA-S 290
R +N+++W+ M+ Y NG +A+ ++ M G++PD++T S++ C+ +
Sbjct: 249 ERCSDCRNLITWSTMIAAYSLNGDGRQALSLYKKMDLEGLKPDEYTFTSLLDVCSIAGDA 308
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
L EG H R GL + ++ ALV YG+ G +ED+ R+F +MN + V+WTAL++
Sbjct: 309 LAEGRALHRRLEAKGLEKKMVLATALVNMYGRYGQLEDALRVFEKMNHWNLVAWTALIAA 368
Query: 351 YAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP 410
+A+ G + IDL +M G++ D++ + VL ACS AG++E G F+ MV ++G+R
Sbjct: 369 FAQHGDVH-AIDLSWRMHLEGVQADDIVFLSVLHACSHAGVLEAGLSCFQEMVADFGVRG 427
Query: 411 IHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL 470
HY+CM+D+L+R GR+ EA+ ++ MPF P + TLL++CR+ G+ G A
Sbjct: 428 GAAHYSCMVDLLARCGRVAEAEELLHSMPFEPAHMEMKTLLAACRVSGDTPRGARVARLA 487
Query: 471 LELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSAD 530
L P++ A YVL+S YA+ KWD V+++R M + GV+K G S ++ K+RVH F A
Sbjct: 488 SGLIPHDAAPYVLMSHAYAAVEKWDEVAEVRERMAKLGVKKPRGWSCVEVKNRVHQFFAG 547
Query: 531 DWS-SPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGL 589
++S + +I EL +L + + GYVPD + H +E +K +L HSE++AIAFGL
Sbjct: 548 NFSWHSEAAEIEVELRRLQAVVKEGGYVPDTGQIGHRLEEDDKEDLLALHSERVAIAFGL 607
Query: 590 LFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
L +P GLPI VVKNLRVCSDCH K IS+ R I+VRDA RFH F+NG CSCGD+W
Sbjct: 608 LRVPAGLPIHVVKNLRVCSDCHAVAKIISRSVGRRIVVRDAYRFHRFENGTCSCGDYW 665
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 186/377 (49%), Gaps = 42/377 (11%)
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
+EE+R +F ++ + SW+ +I + NGL R A++L+ M +G+ +D ++++A
Sbjct: 1 MEEARAVFEKIEFPNIFSWSIIIGACVDNGLARRALELYHWMDHQGVRLDMVVLINLVSA 60
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW-KNVVS 242
C L +L+ G+ + A I + V ++L++MYCK S+ A F+ MA ++VVS
Sbjct: 61 CSSLGSLDHGRALEARITSMGFHLHPVVRNSLLNMYCKAGSVGDARKFFQDMAGDQSVVS 120
Query: 243 WTAMLVGYG--------------------------------------QNGCSEEAVKIFC 264
WTAM+ G+ G E+A+++F
Sbjct: 121 WTAMISGFALHGREDLALDFFRKMVAEGVRPNEVTFVSILGACAAARDQGLDEQALRLFR 180
Query: 265 NMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCG 324
M G PD+ TL + + +C+NL L G + H L GL S I V N+L+ YGKCG
Sbjct: 181 VMDLEGHTPDEVTLVAALEACSNLNLLAAGKKLHELILDAGLDSSI-VRNSLLNMYGKCG 239
Query: 325 NIEDSHRLFNEM-NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVL 383
++++ R+F + R+ ++W+ +++ Y+ G + + L++KM GLKPDE T +L
Sbjct: 240 GLDEARRVFERCSDCRNLITWSTMIAAYSLNGDGRQALSLYKKMDLEGLKPDEYTFTSLL 299
Query: 384 SACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPD 443
CS AG ++ G+ T ++++ R G+LE+A KM +
Sbjct: 300 DVCSIAGDALAEGRALHRRLEAKGLEKKMVLATALVNMYGRYGQLEDALRVFEKMNH-WN 358
Query: 444 AIGWATLLSSCRIHGNV 460
+ W L+++ HG+V
Sbjct: 359 LVAWTALIAAFAQHGDV 375
>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
Length = 684
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/641 (35%), Positives = 356/641 (55%), Gaps = 36/641 (5%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
+WN L++ + GS A++V+ + + + TF+ L + +D +
Sbjct: 79 AWNALLAARSRAGSPGAALRVFRALPSSARPDST--TFTLALTACARLGDLDAAEAVRVR 136
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
G+G VFV S L+ +Y++ G + DA R FD
Sbjct: 137 AFAAGYGRDVFVCSALLHVYSRCGAMGDAIRVFD-------------------------- 170
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
GM KD ++W+TM+ G + G EA+ ++ MR G+A D+ V+ AC
Sbjct: 171 -----GMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLT 225
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
G +H +R+ + +V + ++LVDMY K A VFR M ++N VSW A++
Sbjct: 226 GNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALI 285
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
G+ QNG ++EA+ +F M +G++PD L S + +CA++ L+ G HG + +
Sbjct: 286 SGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKSIHG--FILRRL 343
Query: 308 SFITV-SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
F + A++ Y KCG++E + +LFN+++ RD V W A+++ G ++ + LF++
Sbjct: 344 EFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQE 403
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
+ G+KPD T +LSA S +GLVE+G+ +F+ M+ E+GI P H C++D+L+R+G
Sbjct: 404 LNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLARSG 463
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+EEA + M P W LLS C + +E+G+ A+ +LE P + L+S+
Sbjct: 464 LVEEANEMLASMHTEPTIPIWVALLSGCLNNKKLELGETIAKKILESQPEDIGVLALVSN 523
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
+YA+ KWD V ++R+ M++ G +K PG S I+ H F +D S P +I + K
Sbjct: 524 LYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVHGTRHAFVMEDQSHPQHQEILKMISK 583
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
L+ +M K GYVP V HD++ K ++L++HSE+LAIAFGLL PG + ++KNLRV
Sbjct: 584 LSFEMRKMGYVPRTEFVYHDLDEDVKEQLLSYHSERLAIAFGLLNTSPGTRLVIIKNLRV 643
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCH+A KYISKI REI+VRDA RFH FK+G CSCGD+W
Sbjct: 644 CGDCHDAIKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 684
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 188/388 (48%), Gaps = 41/388 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V+W+ +++G S G +A+ +Y+ M + G+ + ++ + +
Sbjct: 172 MPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAE-DEVVMVGVIQACTLTGNTRM 230
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +HG L+ G V + + LVDMYAK G A++ F +P +N V +N +I+G +
Sbjct: 231 GASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALISGFAQ 290
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G + EA+DLFREM GL D S
Sbjct: 291 NGHAD-------------------------------EALDLFREMSTSGLQPDSGALVSA 319
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC + L+ GK IH FI+R + +G+A++DMY KC S++ A +F ++ +++
Sbjct: 320 LLACADVGFLKLGKSIHGFILRR-LEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDL 378
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V W AM+ G +GC +A+ +F + GI+PD T S++S+ ++ +EEG + R
Sbjct: 379 VLWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDR 438
Query: 301 SLVT-GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKAN 358
+ G+ +V + G +E+++ + M+ + W AL+SG N
Sbjct: 439 MITEFGIEPTEKHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSGCLN----N 494
Query: 359 ETIDLFEKMLSHGL--KPDEVTLIGVLS 384
+ ++L E + L +P+++ ++ ++S
Sbjct: 495 KKLELGETIAKKILESQPEDIGVLALVS 522
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 55/295 (18%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD- 59
MP+ + VSWN LISG A +G ++A+ ++ M GL S S +L C D
Sbjct: 273 MPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLA------CADV 326
Query: 60 ----LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
LG+ IHG IL+ +G+ ++DMY+K G + A++ F++L +++V+
Sbjct: 327 GFLKLGKSIHGFILR-RLEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVL----- 380
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
W MI +G +A+ LF+E+ G+ D
Sbjct: 381 --------------------------WNAMIACCGTHGCGHDALALFQELNETGIKPDHA 414
Query: 176 TFGSVLTACGGLLALEEGK-----QIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAES 230
TF S+L+A +EEGK I F I K V V VD+ + ++ A
Sbjct: 415 TFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCV----VDLLARSGLVEEANE 470
Query: 231 VFRTMAWKNVVS-WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ +M + + W A+L G N E I + + +P+D + +++S+
Sbjct: 471 MLASMHTEPTIPIWVALLSGCLNNKKLELGETIAKKILES--QPEDIGVLALVSN 523
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/650 (36%), Positives = 354/650 (54%), Gaps = 40/650 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D V WN L++G S ++A++ + M G T +++L ++ +
Sbjct: 184 VPSPDTVLWNTLLAGL----SGSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTM 239
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +H K G + V + L+ +YAK G +
Sbjct: 240 GRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDM--------------------------- 272
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
E +R LF M+ D +++ +I+G NG+ +++LF+E+ GL T ++
Sbjct: 273 ----ECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVAL 328
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ +HA +++ N V +AL +YC+ + A F M K +
Sbjct: 329 IPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTM 388
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
SW AM+ GY QNG +E AV +F MQ + P+ T+ S +S+CA L +L G H
Sbjct: 389 ESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKI 448
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
L + V AL+ Y KCG+I ++ +F+ M+ ++ VSW ++SGY G+ E
Sbjct: 449 IANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEA 508
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ L++ M+ L P T + VL ACS GLV++G F M +YGI P +H TCM+D
Sbjct: 509 LKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVD 568
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIG---WATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
+L RAG+L+EA I++ FP A+G W LL +C +H + ++ K A++ L EL+P N
Sbjct: 569 LLGRAGQLKEAFELISE--FPKSAVGPGIWGALLGACMVHKDGDLAKLASQKLFELEPEN 626
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
YVLLS++Y SK ++ + +R+ + + + K PGC+ I+ R H+F A D + P S
Sbjct: 627 TGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVFMAGDRAHPQS 686
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
D IY LEKL KMI+ GY PD + L+DVE EK M+ HSEKLAIAFGLL PG
Sbjct: 687 DAIYLYLEKLTAKMIEAGYRPDTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLNTEPGTE 746
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
IR++KNLRVC DCHNATK ISK+TQR I+VRDA RFH F++G CSCGD+W
Sbjct: 747 IRIIKNLRVCLDCHNATKIISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 796
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 192/429 (44%), Gaps = 39/429 (9%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
R +H + GF + FV S L +Y L DA++ FD +P
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSP--------------- 187
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG-LAMDQFTFGSV 180
D++ W T++ GL + EA++ F M G + D T SV
Sbjct: 188 ----------------DTVLWNTLLAGLSGS----EALEAFVRMAGAGSVRPDSTTLASV 227
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A + G+ +HAF + + V + L+ +Y KC ++ A +F M ++
Sbjct: 228 LPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDL 287
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V++ A++ GY NG +V++F + G+ P TL ++I + H
Sbjct: 288 VTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAH 347
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ GL + VS AL T Y + +++ + R F+ M + SW A++SGYA+ G
Sbjct: 348 VVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMA 407
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LF++M + ++P+ +T+ LSAC++ G + G+ +I+ E ++ T +ID
Sbjct: 408 VALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYV-MTALID 466
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+ + G + EA+ + M + + W ++S +HG + +++ +P S
Sbjct: 467 MYVKCGSIAEARCIFDSMD-NKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAH-LHPTS 524
Query: 481 YVLLSSIYA 489
LS +YA
Sbjct: 525 STFLSVLYA 533
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 168/401 (41%), Gaps = 73/401 (18%)
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG----SVLTAC 184
RL+R D ++N L R L ++ + D F+F S+ ++C
Sbjct: 79 RLYRAFPRPDR---------FLRNSLLRSLPTLRADLLFP--SPDSFSFAFAATSLASSC 127
Query: 185 --GGL----LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
GG+ A + +HA + + + FV SAL +Y A VF +
Sbjct: 128 SRGGISPPSAASAALRPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSP 187
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQF 297
+ V W +L G + EA++ F M G + PD TL SV+ + A +A+ G
Sbjct: 188 DTVLWNTLLAGLSGS----EALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCV 243
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H GL V L++ Y KCG++E + LF+ M D V++ AL+SGY+ G
Sbjct: 244 HAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMV 303
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGV-----------LSACSRAGLVEKG----------- 395
+++LF++++ GL+P TL+ + L+ C A +V+ G
Sbjct: 304 GSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTAL 363
Query: 396 -------------RHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP--- 439
R F+ M ++ + + MI ++ G E A + +M
Sbjct: 364 TTLYCRFNDMDSARRAFDAMPEK-----TMESWNAMISGYAQNGLTEMAVALFQQMQALN 418
Query: 440 FPPDAIGWATLLSSCRIHGNVEIGKWA----AESLLELDPY 476
P+ + ++ LS+C G + +GKW A LEL+ Y
Sbjct: 419 VRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVY 459
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/625 (36%), Positives = 335/625 (53%), Gaps = 66/625 (10%)
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
+ LG Q+H H+L G VGS +V YA
Sbjct: 86 LKLGHQVHAHMLLRGLQPTALVGSKMVAFYAS---------------------------- 117
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
G ++ S +F G+ + S+ + +MI + G + + M G D FTF
Sbjct: 118 ---SGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTF 174
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIK----------- 226
VL + LL++ GK +H I+R + +++V ++L+ +Y KC I
Sbjct: 175 PFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTI 234
Query: 227 --------------------YAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM 266
A ++F M W+N+VSWT M+ GY Q+G +++A+ +F M
Sbjct: 235 RDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEM 294
Query: 267 --QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCG 324
+ +G+ P+ T+ SV+ +CA L++LE G Q H + GL S +V AL Y KCG
Sbjct: 295 VKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCG 354
Query: 325 NIEDSHRLFNEMNVRDE--VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGV 382
++ D+ F+++N ++ ++W +++ YA +G + + F +M+ G++PD++T G+
Sbjct: 355 SLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGL 414
Query: 383 LSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPP 442
LS CS +GLV+ G YF M Y I P +HY C+ D+L RAGRL EA + +MP P
Sbjct: 415 LSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPA 474
Query: 443 DAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRR 502
W +LL++CR H N+E+ + AA L L+P N +YVLLS++YA G+W V +LR
Sbjct: 475 GPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRA 534
Query: 503 TMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSS 562
++ +G +K PGCSWI+ + H+F D S P +IY LE L KM GY PD S
Sbjct: 535 IVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSY 594
Query: 563 VLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQ 622
VLHD+ EK L HSEKLA+AFG+L P +RV KNLR+C DCH A +IS+I
Sbjct: 595 VLHDISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYG 654
Query: 623 REILVRDAVRFHLFKNGECSCGDFW 647
RE++VRD RFH FK G CSCGD+W
Sbjct: 655 REVIVRDINRFHHFKGGCCSCGDYW 679
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 174/351 (49%), Gaps = 7/351 (1%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
+N +I +A +G V Y M G TF +L S V +G+ +HG I
Sbjct: 139 FNSMIRAYARYGFAERTVATYFSMHSWGFTG-DYFTFPFVLKSSVELLSVWMGKCVHGLI 197
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
L+ G ++V + L+ +Y K G I DA + FD + +++ +N ++ G + G ++ +
Sbjct: 198 LRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAAL 257
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE--GLAMDQFTFGSVLTACGG 186
+F M ++ +SWTTMI+G Q+GL ++A+ LF EM E G+ + T SVL AC
Sbjct: 258 AIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQ 317
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW--KNVVSWT 244
L LE G+QIH R N V AL MY KC S+ A + F + KN+++W
Sbjct: 318 LSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWN 377
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
M+ Y G +AV F M + GI+PDD T ++S C++ ++ G ++ T
Sbjct: 378 TMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTT 437
Query: 305 GLISFITVSNALVT-FYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAK 353
I+ A V G+ G + ++ +L EM + S W +L++ K
Sbjct: 438 YSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRK 488
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 150/319 (47%), Gaps = 35/319 (10%)
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
++ V GL L+ G Q+HA ++ + VGS +V Y I + SVF
Sbjct: 71 LSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNG 130
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
+ + + + +M+ Y + G +E V + +M G D FT V+ S L S+ G
Sbjct: 131 IGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMG 190
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE------------- 341
HG L GL + V+ +L+ YGKCG I D+ ++F+ M +RD
Sbjct: 191 KCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKS 250
Query: 342 ------------------VSWTALVSGYAKFGKANETIDLFEKMLSH--GLKPDEVTLIG 381
VSWT ++SGY++ G A + + LF++M+ G++P+ VT++
Sbjct: 251 GCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMS 310
Query: 382 VLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF- 440
VL AC++ +E+GR E+ + G+ + + ++ G L +A++ +K+
Sbjct: 311 VLPACAQLSTLERGRQIHELACR-MGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRN 369
Query: 441 PPDAIGWATLLSSCRIHGN 459
+ I W T++++ +G+
Sbjct: 370 EKNLIAWNTMITAYASYGH 388
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 87/172 (50%), Gaps = 7/172 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLG-NLSRITFSTMLIMSSSRRCVD 59
MP+ + VSW +ISG++ G A+ +++ M+K+ G + +T ++L + ++
Sbjct: 263 MPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLE 322
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL--PEKNIVMYNTMITG 117
GRQIH + G S V L MYAK G + DA+ FD+L EKN++ +NTMIT
Sbjct: 323 RGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITA 382
Query: 118 LLRRG----LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM 165
G V R + + D I++T +++G +GL + F M
Sbjct: 383 YASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHM 434
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 112/255 (43%), Gaps = 17/255 (6%)
Query: 273 PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRL 332
P + V L L+ G Q H L+ GL V + +V FY G+I+ S +
Sbjct: 68 PPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSV 127
Query: 333 FNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLV 392
FN + + + +++ YA++G A T+ + M S G D T VL + V
Sbjct: 128 FNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSV 187
Query: 393 EKGRHYFEIMVKEYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATL 450
G+ ++++ G++ D Y T +I + + G + +A + M D W L
Sbjct: 188 WMGKCVHGLILR-IGLQ--FDLYVATSLIILYGKCGEINDAGKVFDNMTI-RDVSSWNAL 243
Query: 451 LSSCRIHGNVEIGKWAAESLLELDPY-NPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
L+ G ++ AA ++ E P+ N S+ + S Y+ G ++Q ++ ++ V
Sbjct: 244 LAGYTKSGCID----AALAIFERMPWRNIVSWTTMISGYSQSG----LAQQALSLFDEMV 295
Query: 510 RKDPGC--SWIKYKS 522
++D G +W+ S
Sbjct: 296 KEDSGVRPNWVTIMS 310
>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
Length = 704
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/625 (36%), Positives = 369/625 (59%), Gaps = 32/625 (5%)
Query: 23 NDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSP 82
++A++++ ++ +G ++ T+ ++ + + +++ +++ G ++ +
Sbjct: 112 HEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNR 171
Query: 83 LVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISW 142
++ M+ K G++ DA+R FDE+PEKNI+ +NT+I GL+ G E+ RLF M S +
Sbjct: 172 VLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAG 231
Query: 143 TTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIR 202
+ M F +++ A GL + G+Q+H+ ++
Sbjct: 232 SRM-------------------------------FVTMIRASAGLGLIFAGRQLHSCSLK 260
Query: 203 NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKI 262
+VFV AL+DMY KC SI+ A+ VF M K V W +++ GY +G SEEA+ +
Sbjct: 261 TGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSM 320
Query: 263 FCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGK 322
+ M+ +G++ D+FT +I CA LASLE Q H + G I + ALV Y K
Sbjct: 321 YYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSK 380
Query: 323 CGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGV 382
G IED+ +F+ M ++ +SW AL++GY G+ E +++FE+ML G+ P+ VT + V
Sbjct: 381 WGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAV 440
Query: 383 LSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPP 442
LSACS +GL ++G FE M +++ I+P HY CMI++L R G L+EA + I PF P
Sbjct: 441 LSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKP 500
Query: 443 DAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRR 502
WA LL++CR+H N E+GK+AAE L + P ++YV+L +IY G+ + + + +
Sbjct: 501 TVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNXSGRLEEAAAVIQ 560
Query: 503 TMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSS 562
T++ +G+R P CSWI+ K + + F + D S +IY +L++L ++ K GYVP
Sbjct: 561 TLKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELMLEISKHGYVPQXKF 620
Query: 563 VLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQ 622
+L DV+ E+ ++L +HSEKLAIAFGL+ P+++V++ R+C DCH+A K I+ +T+
Sbjct: 621 LLPDVDEQEE-RVLLYHSEKLAIAFGLINTSDWTPLQIVQSHRICGDCHSAIKLIALVTR 679
Query: 623 REILVRDAVRFHLFKNGECSCGDFW 647
REI+VRDA RFH FK+G CSCGD+W
Sbjct: 680 REIVVRDASRFHHFKDGSCSCGDYW 704
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 200/441 (45%), Gaps = 73/441 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +SWN +I G G +A +++ LM+ + F TM+ S+ +
Sbjct: 192 MPEKNILSWNTIIGGLVDAGDYFEAFRLF-LMMWQXFSDAGSRMFVTMIRASAGLGLIFA 250
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H LK G G VFV L+DMY+K G I DA+ FD++PEK V +N++I G
Sbjct: 251 GRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYAL 310
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G E EA+ ++ EMR G+ +D FTF +
Sbjct: 311 HGYSE-------------------------------EALSMYYEMRDSGVKIDNFTFSII 339
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ C L +LE KQ HA ++R+ ++ +ALVD+Y K I+ A+ VF M KNV
Sbjct: 340 IRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNV 399
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
+SW A++ GYG +G EAV++F M G+ P+ T +V+S+C+ + G + F
Sbjct: 400 ISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFES 459
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKAN 358
S + ++ G+ G ++++ L + + V+ W AL
Sbjct: 460 MSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAAL----------- 508
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH-DHYTC 417
L+AC E G+ E K YG+ P +Y
Sbjct: 509 ------------------------LTACRVHKNFELGKFAAE---KLYGMGPEKLSNYVV 541
Query: 418 MIDILSRAGRLEEAKSFINKM 438
+++I + +GRLEEA + I +
Sbjct: 542 LLNIYNXSGRLEEAAAVIQTL 562
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/652 (36%), Positives = 361/652 (55%), Gaps = 49/652 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P V+WN+++ +A + +A ML+ G+ ++F+++L SS C
Sbjct: 501 LPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLP-DALSFTSVL---SSCYCSQE 556
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+ + IL+ G+ S + + L+ M+ G R
Sbjct: 557 AQVLRMCILESGYRSAC-LETALISMH-----------------------------GRCR 586
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+E++R +F M D +SWT M++ +N +E +LFR M+LEG+ D+FT +
Sbjct: 587 E--LEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATT 644
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C L GK IHA + + ++ V +AL++MY C + A S F TM +++
Sbjct: 645 LDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDL 704
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW M Y Q G ++EAV +F MQ G++PD T + ++ A + +G FH
Sbjct: 705 VSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHAL 764
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT-----ALVSGYAKFG 355
+ +GL S ++V+ LV Y KCG ++++ LF R WT A++ A+ G
Sbjct: 765 AAESGLDSDVSVATGLVKLYAKCGKLDEAMSLF-----RGACDWTVVLLNAIIGALAQHG 819
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
+ E + +F KM G++PD TL+ ++SAC AG+VE+G F M + +GI P +HY
Sbjct: 820 FSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHY 879
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
C +D+L RAG+LE A+ I KMPF + + W +LL +C++ G+ E+G+ A+ +LELDP
Sbjct: 880 ACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDP 939
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSP 535
+N A++V+LS+IY + GKW R+ M ++ V+ PG SW + +VH F A D S P
Sbjct: 940 HNSAAHVVLSNIYCATGKWKDADVDRKKMLDENVKNAPGMSWFEIGKQVHEFVAGDRSHP 999
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
+D+IY L+KL M + GY D DVE K K L +HSE++AIAFGL+ PP
Sbjct: 1000 KTDEIYVVLDKLELLMRRAGYEADKG---LDVEDELKEKALGYHSERIAIAFGLIATPPE 1056
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+++VKNLRVC DCH ATKYIS + REI+VRD++RFH F NG CSC D W
Sbjct: 1057 TTLKIVKNLRVCGDCHTATKYISMVMGREIIVRDSLRFHHFSNGTCSCKDCW 1108
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 142/541 (26%), Positives = 233/541 (43%), Gaps = 80/541 (14%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +SWN ++ S V ++ ML G+ + ++++F +L S+ +D GR+I
Sbjct: 401 DVISWNTMLGASEDRKSFGKVVNTFHHMLLAGI-DPNKVSFIAILNACSNSEALDFGRKI 459
Query: 65 HGHILKFGFGSYV--FVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
H IL YV V + LV MY K G I +A+ F E+P
Sbjct: 460 HSLILTRR-RDYVESSVATMLVSMYGKCGSISEAELVFKEMP------------------ 500
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
+ + ++W M+ QN +EA EM G+ D +F SVL+
Sbjct: 501 -----------LPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLS 549
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
+C +E + + I+ + ++ + + +AL+ M+ +C+ ++ A SVF M +VVS
Sbjct: 550 SC---YCSQEAQVLRMCILESGYR-SACLETALISMHGRCRELEQARSVFNEMDHGDVVS 605
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL 302
WTAM+ +N +E +F MQ G+ PD FTL + + +C +L G H
Sbjct: 606 WTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVT 665
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
GL + I V NAL+ Y CG+ ++ F M RD VSW + + YA+ G A E +
Sbjct: 666 EIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVL 725
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL 422
LF +M G+KPD++T L+ + LV G+ F + E G+ T ++ +
Sbjct: 726 LFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGK-LFHALAAESGLDSDVSVATGLVKLY 784
Query: 423 SRAGRLEEAKSF----------------------------------INKMPFPPDAIGWA 448
++ G+L+EA S + + PD
Sbjct: 785 AKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLV 844
Query: 449 TLLSSCRIHGNVEIGKWAAESLLELDPYNPAS-----YVLLSSIYASKGKWDHVSQLRRT 503
+++S+C G VE G S L + Y S Y + G+ +H Q+ R
Sbjct: 845 SIISACGHAGMVEEG---CSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRK 901
Query: 504 M 504
M
Sbjct: 902 M 902
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 148/588 (25%), Positives = 265/588 (45%), Gaps = 77/588 (13%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW LIS +A G+ A ++ ML + + T ML ++ R + +GR IH
Sbjct: 92 VSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHA 151
Query: 67 HILKFGF----GSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
I + G + VG+ +++MYAK G + DA F +PEK++V + M G
Sbjct: 152 MIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMA------G 205
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
+ RR + +A+ +FREM L+ LA + TF +T
Sbjct: 206 AYAQERRFY------------------------PDALRIFREMLLQPLAPNVITF---IT 238
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK---N 239
A G +L +G +H+ + + +AL++MY KC + A SVF+ MA + +
Sbjct: 239 ALGACTSLRDGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELD 298
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS-CANLASLEEGTQFH 298
+VSW AM+ + G +A+ IF ++ G+ P+ TL +++++ A+ FH
Sbjct: 299 LVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFH 358
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKA 357
GR +G + + + NA+++ Y KCG + +F + + D +SW ++
Sbjct: 359 GRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSF 418
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
+ ++ F ML G+ P++V+ I +L+ACS + ++ GR +++ T
Sbjct: 419 GKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATM 478
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDA-IGWATLLSSCRIHGNVEIGKWAAESLLEL--- 473
++ + + G + EA+ +MP P + + W +L + + + K A +L+E+
Sbjct: 479 LVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGA---YAQNDRSKEAFGALMEMLQG 535
Query: 474 --DPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGC---SWIKYKSRVH--- 525
P + +LSS Y S+ LR + E G R C + I R
Sbjct: 536 GVLPDALSFTSVLSSCYCSQ----EAQVLRMCILESGYRS--ACLETALISMHGRCRELE 589
Query: 526 ----IFSADD------WSSPYS----DQIYAELEKLNRKMIKEGYVPD 559
+F+ D W++ S ++ + E+ L R+M EG +PD
Sbjct: 590 QARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPD 637
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 181/358 (50%), Gaps = 12/358 (3%)
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
E+++ + N +I +R G +EE+ +F M++++ +SWT +I+ Q G A LFR
Sbjct: 57 EQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRT 116
Query: 165 MRLEGLAM-DQFTFGSVLTACGGLLALEEGKQIHAFI----IRNDHKDNVFVGSALVDMY 219
M LE A + +T ++L AC L G+ IHA I + VG+A+++MY
Sbjct: 117 MLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMY 176
Query: 220 CKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQN-GCSEEAVKIFCNMQRNGIEPDDFTL 278
KC S++ A +VF + K+VVSWTAM Y Q +A++IF M + P+ T
Sbjct: 177 AKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITF 236
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
+ + +C SL +GT H L SNAL+ YGKCG+ E ++ +F M
Sbjct: 237 ITALGAC---TSLRDGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMAS 293
Query: 339 RDE---VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG 395
R E VSW A++S + G+ + + +F ++ G++P+ VTLI +L+A + +G+
Sbjct: 294 RQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGA 353
Query: 396 RHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
F + E G +I + ++ G A + ++ + D I W T+L +
Sbjct: 354 ARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGA 411
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/463 (26%), Positives = 215/463 (46%), Gaps = 52/463 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSV-NDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
+P D VSW + +A DA++++ ML L + ITF T L +S R
Sbjct: 192 IPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAP-NVITFITALGACTSLR--- 247
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G +H L+++A GFD L N +I
Sbjct: 248 DGTWLHS-------------------------LLHEASLGFDPLAS------NALINMYG 276
Query: 120 RRGLVEESRRLFRGMKDK---DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
+ G E + +F+ M + D +SW MI+ ++ G +A+ +FR +RLEG+ + T
Sbjct: 277 KCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVT 336
Query: 177 FGSVLTACGGL-LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
++L A + + H I + + +V +G+A++ MY KC A +VFR +
Sbjct: 337 LITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRI 396
Query: 236 AWK-NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
WK +V+SW ML + V F +M GI+P+ + +++++C+N +L+ G
Sbjct: 397 RWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFG 456
Query: 295 TQFHGRSLVTGLISFI--TVSNALVTFYGKCGNIEDSHRLFNEMNV--RDEVSWTALVSG 350
+ H ++T ++ +V+ LV+ YGKCG+I ++ +F EM + R V+W ++
Sbjct: 457 RKIHSL-ILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGA 515
Query: 351 YAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP 410
YA+ ++ E +ML G+ PD ++ VLS+C + + + E G R
Sbjct: 516 YAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC----YCSQEAQVLRMCILESGYRS 571
Query: 411 IHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
T +I + R LE+A+S N+M D + W ++S+
Sbjct: 572 ACLE-TALISMHGRCRELEQARSVFNEMDH-GDVVSWTAMVSA 612
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 160/332 (48%), Gaps = 23/332 (6%)
Query: 171 AMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAES 230
A D + ++L +C L +GK H I + ++F+G+ L++MY +C S++ A +
Sbjct: 22 AADLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHA 81
Query: 231 VFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLA 289
+F M +NVVSWTA++ Q G A +F M + P+ +TL +++++CAN
Sbjct: 82 IFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSR 141
Query: 290 SLEEGTQFHGRSLVTGL----ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
L G H GL + V NA++ Y KCG++ED+ +F + +D VSWT
Sbjct: 142 DLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWT 201
Query: 346 ALVSGYAKFGK-ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
A+ YA+ + + + +F +ML L P+ +T I L AC+ + G ++ +
Sbjct: 202 AMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTS---LRDGTWLHSLLHE 258
Query: 405 -EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPP--DAIGWATLLSSCRIHGNVE 461
G P+ + +I++ + G E A S M D + W ++S+ +VE
Sbjct: 259 ASLGFDPLASN--ALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISA-----SVE 311
Query: 462 IGK----WAAESLLELDPYNPASYVLLSSIYA 489
G+ A L L+ P S L++ + A
Sbjct: 312 AGRHGDAMAIFRRLRLEGMRPNSVTLITILNA 343
>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 720
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/649 (36%), Positives = 370/649 (57%), Gaps = 37/649 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP V+WN +I+ + H +AV++Y LM+ + + T S++ S
Sbjct: 107 MPERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLP-DEYTLSSVFKAFSDLSLEKE 165
Query: 61 GRQIHGHILKFGFG-SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
++ HG + G S VFVGS LVDMY K G +AK D + EK++V+
Sbjct: 166 AQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLI-------- 217
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
T +I G Q G + EA+ F+ M +E + +++T+ S
Sbjct: 218 -----------------------TALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYAS 254
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL +CG L + GK IH ++++ + + ++L+ MY +C + + VF+ + + N
Sbjct: 255 VLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLLVFKCIKYPN 314
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
V+WT+++ G QNG E A+ F M R+ ++P+ FTL S + C+NLA EEG Q HG
Sbjct: 315 QVTWTSLISGLVQNGREETALIEFRKMMRDSVKPNSFTLSSALRGCSNLAMFEEGRQVHG 374
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
G + L+ YGKCG + + +F+ ++ D +S ++ YA+ G E
Sbjct: 375 IVSKYGFDRDKYAGSGLIELYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGRE 434
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
++LFE+M++ GL+P++VT++ VL AC+ +GLVE+G F+ K+ I +DHY CM+
Sbjct: 435 ALELFERMINLGLQPNDVTVLSVLLACNNSGLVEEGCELFDSFRKD-KIMLTNDHYACMV 493
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L RAGRLEEA+ I ++ PD + W TLLS+C++H VE+ + +LE+ P +
Sbjct: 494 DMLGRAGRLEEAEMLITEVT-NPDLVLWRTLLSACKVHRKVEMAERITRKILEIAPGDEG 552
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADD-WSSPYSD 538
+ +LLS++YAS GKW V +++ M+E ++K+P SW++ H F A D +S P S+
Sbjct: 553 TLILLSNLYASTGKWKRVIEMKSKMKEMKLKKNPAMSWVEIDKETHTFMAGDLFSHPNSE 612
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
QI LE+L +K GYV D S V D+E + K + L+ HSEKLAIAF ++ G I
Sbjct: 613 QILENLEELIKKAKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFA-VWRNVGGSI 671
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R++KNLRVC DCH+ K +S+I +REI+ RD+ RFH F++G CSCGD+W
Sbjct: 672 RILKNLRVCVDCHSWIKIVSRIIKREIICRDSKRFHHFRDGSCSCGDYW 720
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/413 (29%), Positives = 200/413 (48%), Gaps = 39/413 (9%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
TFS +L R + + I +LK GF GS LVD K G I G+
Sbjct: 49 TFSQLLRQCIDERSISGIKNIQAQMLKSGF-PVELSGSKLVDASLKCGEI-----GY--- 99
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
+R+LF GM ++ ++W ++I +++ +EA++++R
Sbjct: 100 -----------------------ARQLFDGMPERHIVTWNSIIAYYIKHRRSKEAVEMYR 136
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAF-IIRNDHKDNVFVGSALVDMYCKC 222
M + D++T SV A L +E ++ H +I NVFVGSALVDMY K
Sbjct: 137 LMISNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKF 196
Query: 223 KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
+ A+ V + K+VV TA++VGY Q G EAVK F +M ++P+++T SV+
Sbjct: 197 GKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVL 256
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
SC NL + G HG + +G S + +L+T Y +C ++DS +F + ++V
Sbjct: 257 ISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQV 316
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
+WT+L+SG + G+ + F KM+ +KP+ TL L CS + E+GR I
Sbjct: 317 TWTSLISGLVQNGREETALIEFRKMMRDSVKPNSFTLSSALRGCSNLAMFEEGRQVHGI- 375
Query: 403 VKEYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
V +YG D Y + +I++ + G + A+ + + D I T++ S
Sbjct: 376 VSKYGFD--RDKYAGSGLIELYGKCGCSDMARLVFDTLS-EVDVISLNTMIYS 425
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 159/313 (50%), Gaps = 5/313 (1%)
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
TF +L C ++ K I A ++++ + GS LVD KC I YA +F M
Sbjct: 49 TFSQLLRQCIDERSISGIKNIQAQMLKSGFPVEL-SGSKLVDASLKCGEIGYARQLFDGM 107
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
+++V+W +++ Y ++ S+EAV+++ M N + PD++TL SV + ++L+ +E
Sbjct: 108 PERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVFKAFSDLSLEKEAQ 167
Query: 296 QFHGRSLVTGL-ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
+ HG +++ GL +S + V +ALV Y K G ++ + + + +D V TAL+ GY++
Sbjct: 168 RSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQK 227
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G+ E + F+ ML ++P+E T VL +C + G+ +MVK G
Sbjct: 228 GEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKS-GFESALAS 286
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
T ++ + R ++++ + + P+ + W +L+S +G E ++ D
Sbjct: 287 QTSLLTMYLRCSLVDDSLLVFKCIKY-PNQVTWTSLISGLVQNGREETALIEFRKMMR-D 344
Query: 475 PYNPASYVLLSSI 487
P S+ L S++
Sbjct: 345 SVKPNSFTLSSAL 357
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/644 (36%), Positives = 366/644 (56%), Gaps = 53/644 (8%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTML--IMSSSRRCVDLGRQI 64
VS+ L+ G+ HG + DA+++++ M + + +T++ +L + + R V+ R++
Sbjct: 113 VSFTSLLRGYVRHGLLADAIRLFHQMPER-----NHVTYTVLLGGFLDAGR--VNEARKL 165
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
+ V + ++ Y + G I +A+ FDE+P++N+V + MI+G + G V
Sbjct: 166 FDEMPD----KDVVARTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGKV 221
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+R+LF M D++ +SWT M+ G +Q G +A DLF M +A AC
Sbjct: 222 ILARKLFEVMPDRNEVSWTAMLVGYIQAGHVEDAEDLFNAMPDHPVA-----------AC 270
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
++ F +VD A+++F M ++ +W+
Sbjct: 271 NAMMV-------------------GFGQHGMVDA---------AKAMFERMCARDDGTWS 302
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
AM+ Y QN EA+ F M GI P+ + S+++ CA LA+ + G + H L
Sbjct: 303 AMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELHAAMLRC 362
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
+ + +AL+T Y KCGN++ + R+FN +D V W ++++GYA+ G E + +F
Sbjct: 363 SFDTDVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIF 422
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+ + + PD +T IGVL+ACS G V++GR F M IR HY+CM+D+L R
Sbjct: 423 DDLRLARMAPDGITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLGR 482
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG ++EA IN MP PDAI W L+ +CR+H N EI + AA+ LLEL+P + YVLL
Sbjct: 483 AGLVDEALDLINNMPVEPDAIIWGALMGACRMHKNAEIAEVAAKKLLELEPGSAGPYVLL 542
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADD-WSSPYSDQIYAE 543
S IY S G+W+ S +R+ + + + K PGCSWI+Y VH+F++ D S P I
Sbjct: 543 SHIYTSTGRWEDASDMRKFISSRNLNKSPGCSWIEYNKMVHLFTSGDVLSHPEHAIILNM 602
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
LE+L+ +++ GY D S VLHDV+ +K + L +HSE+ A+A+GLL +P G+PIRV+KN
Sbjct: 603 LEELDGLLMESGYSADGSFVLHDVDEEQKAQSLRYHSERQAVAYGLLKVPAGMPIRVMKN 662
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LRVC DCH+A K I+KIT REI++RDA RFH FK+G CSC D+W
Sbjct: 663 LRVCGDCHSAIKLITKITSREIILRDANRFHHFKDGLCSCRDYW 706
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 179/406 (44%), Gaps = 57/406 (14%)
Query: 89 KLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKD---------- 138
+ G I A+ FD +P + YN +I G R L + + LF M +D
Sbjct: 29 RAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPSRDLGSYNALIAG 88
Query: 139 -----------------------SISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
+S+T+++ G +++GL +AI LF +M +
Sbjct: 89 LSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAIRLFHQMPER----NHV 144
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIKYAESVFRT 234
T+ +L GG L+ G+ A + ++ D +V +A++ YC+ I A ++F
Sbjct: 145 TYTVLL---GGF--LDAGRVNEARKLFDEMPDKDVVARTAMLSGYCQAGRITEARALFDE 199
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEE 293
M +NVVSWTAM+ GY QNG A K+F M RN + +G + +
Sbjct: 200 MPKRNVVSWTAMISGYAQNGKVILARKLFEVMPDRNEVSWTAMLVGYI----------QA 249
Query: 294 GTQFHGRSLVTGLISF-ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
G L + + NA++ +G+ G ++ + +F M RD+ +W+A++ Y
Sbjct: 250 GHVEDAEDLFNAMPDHPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKVYE 309
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
+ E + F +ML G++P+ + I +L+ C+ + GR M++ +
Sbjct: 310 QNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSFDTDVF 369
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ +I + + G L++AK N M P D + W ++++ HG
Sbjct: 370 -AVSALITMYIKCGNLDKAKRVFN-MFEPKDVVMWNSMITGYAQHG 413
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 130/315 (41%), Gaps = 94/315 (29%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDA------------------VKVY--NLMLKDGLGNL 40
MP H + N ++ G HG V+ A +KVY N L + L
Sbjct: 262 MPDHPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKVYEQNEFLMEALSTF 321
Query: 41 SRI----------TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKL 90
+ +F ++L + ++ D GR++H +L+ F + VF S L+ MY K
Sbjct: 322 REMLCRGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKC 381
Query: 91 GLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLM 150
G + AKR F+ K++VM+N+MITG + GL E
Sbjct: 382 GNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGE------------------------- 416
Query: 151 QNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVF 210
EA+ +F ++RL +A D T+ VLTAC ++EG++I + N ++
Sbjct: 417 ------EALGIFDDLRLARMAPDGITYIGVLTACSYTGKVKEGREIFNSMGMN---SSIR 467
Query: 211 VGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
+G+A ++ M+ G+ G +EA+ + NM
Sbjct: 468 LGAA---------------------------HYSCMVDLLGRAGLVDEALDLINNMP--- 497
Query: 271 IEPDDFTLGSVISSC 285
+EPD G+++ +C
Sbjct: 498 VEPDAIIWGALMGAC 512
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 103/278 (37%), Gaps = 51/278 (18%)
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
R L + + +NA + + + GNIE + F+ M +R S+ AL++GY + +
Sbjct: 7 RFLPSSTAPAVVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDA 66
Query: 360 TIDLFEKMLSHG-----------------------------LKPDEVTLIGVLSACSRAG 390
+ LF +M S L P V+ +L R G
Sbjct: 67 ALGLFHRMPSRDLGSYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHG 126
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATL 450
L+ F M + H YT ++ AGR+ EA+ ++MP D + +
Sbjct: 127 LLADAIRLFHQMPERN-----HVTYTVLLGGFLDAGRVNEARKLFDEMP-DKDVVARTAM 180
Query: 451 LSSCRIHGNVEIGKWAAESLL--ELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
LS G + G+ L E+ N S+ + S YA GK +L M ++
Sbjct: 181 LS-----GYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVMPDRN 235
Query: 509 VRKDPGCSW----IKYKSRVHIFSADDWSSPYSDQIYA 542
SW + Y H+ A+D + D A
Sbjct: 236 -----EVSWTAMLVGYIQAGHVEDAEDLFNAMPDHPVA 268
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 239/672 (35%), Positives = 368/672 (54%), Gaps = 63/672 (9%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW +I G+A DAV ++ M++D + +T ++ + ++ G +++
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
I G + S LVDMY K I AKR FDE N+ + N M + +R+GL
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLT-- 318
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
REA+ +F M G+ D+ + S +++C
Sbjct: 319 -----------------------------REALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L + GK H +++RN + + +AL+DMY KC A +F M+ K VV+W ++
Sbjct: 350 LRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSI 409
Query: 247 LVGYGQNG-------------------------------CSEEAVKIFCNMQ-RNGIEPD 274
+ GY +NG EEA+++FC+MQ + G+ D
Sbjct: 410 VAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNAD 469
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN 334
T+ S+ S+C +L +L+ + G+ + + LV + +CG+ E + +FN
Sbjct: 470 GVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFN 529
Query: 335 EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEK 394
+ RD +WTA + A G A I+LF+ M+ GLKPD V +G L+ACS GLV++
Sbjct: 530 SLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQ 589
Query: 395 GRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
G+ F M+K +G+ P HY CM+D+L RAG LEEA I MP P+ + W +LL++C
Sbjct: 590 GKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAAC 649
Query: 455 RIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPG 514
R+ GNVE+ +AAE + L P SYVLLS++YAS G+W+ ++++R +M+EKG+RK PG
Sbjct: 650 RVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPG 709
Query: 515 CSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIK 574
S I+ + + H F++ D S P I A L++++++ G+VPD+S+VL DV+ EKI
Sbjct: 710 TSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIF 769
Query: 575 MLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFH 634
ML+ HSEKLA+A+GL+ G IR+VKNLRVCSDCH+ K+ SK+ REI++RD RFH
Sbjct: 770 MLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFH 829
Query: 635 LFKNGECSCGDF 646
+ G+CSCGDF
Sbjct: 830 YIRQGKCSCGDF 841
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 151/567 (26%), Positives = 253/567 (44%), Gaps = 106/567 (18%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
+N LI G+AS G N+A+ ++ M+ G+ + TF L + R G QIHG I
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISP-DKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+K G+ +FV + LV YA+ G + + +R
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGEL-------------------------------DSAR 189
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDL-FREMRLEGLAMDQFTFGSVLTACGGL 187
++F M +++ +SWT+MI G + ++A+DL FR +R E + + T V++AC L
Sbjct: 190 KVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKL 249
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
LE G++++AFI + + N + SALVDMY KC +I A+ +F N+ AM
Sbjct: 250 EDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMA 309
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
Y + G + EA+ +F M +G+ PD ++ S ISSC+ L ++ G HG L G
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFE 369
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN--------- 358
S+ + NAL+ Y KC + + R+F+ M+ + V+W ++V+GY + G+ +
Sbjct: 370 SWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM 429
Query: 359 ----------------------ETIDLFEKMLSH-GLKPDEVTLIGVLSACSRAGLVEKG 395
E I++F M S G+ D VT++ + SAC G ++
Sbjct: 430 PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLA 489
Query: 396 R--HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP-------------- 439
+ +Y+ +++ GI+ T ++D+ SR G E A S N +
Sbjct: 490 KWIYYY---IEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAM 546
Query: 440 --------------------FPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
PD + + L++C G V+ GK S+L+L +P
Sbjct: 547 AMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPE 606
Query: 480 S--YVLLSSIYASKGKWDHVSQLRRTM 504
Y + + G + QL M
Sbjct: 607 DVHYGCMVDLLGRAGLLEEAVQLIEDM 633
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 136/254 (53%), Gaps = 6/254 (2%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC---KSIKYAESVFR-TMAWKNVVSWT 244
++E K H + + ++V + LV C+ +S+ +A+ VF + ++ +
Sbjct: 44 TIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYN 103
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
+++ GY +G EA+ +F M +GI PD +T +S+CA + G Q HG +
Sbjct: 104 SLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKM 163
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G + V N+LV FY +CG ++ + ++F+EM+ R+ VSWT+++ GYA+ A + +DLF
Sbjct: 164 GYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLF 223
Query: 365 EKML-SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
+M+ + P+ VT++ V+SAC++ +E G + ++ GI + ++D+
Sbjct: 224 FRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAF-IRNSGIEVNDLMVSALVDMYM 282
Query: 424 RAGRLEEAKSFINK 437
+ ++ AK ++
Sbjct: 283 KCNAIDVAKRLFDE 296
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 121/287 (42%), Gaps = 68/287 (23%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSWN +ISG +A++V+ M N +T ++ +DL
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+ I+ +I K G V +G+ LVDM+++ G PE + ++N++
Sbjct: 489 AKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG-----------DPESAMSIFNSLT----- 532
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
++D +WT I + G AI+LF +M +GL D F
Sbjct: 533 ---------------NRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGA 577
Query: 181 LTAC--GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
LTAC GGL +++GK+I +++ G + D++ C
Sbjct: 578 LTACSHGGL--VQQGKEIFYSMLK-------LHGVSPEDVHYGC---------------- 612
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
M+ G+ G EEAV++ +M +EP+D S++++C
Sbjct: 613 -------MVDLLGRAGLLEEAVQLIEDMP---MEPNDVIWNSLLAAC 649
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 237/648 (36%), Positives = 372/648 (57%), Gaps = 34/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VS+N +I G+ V ++V+++ L +L +T S++L R + L
Sbjct: 268 MDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDL--LTVSSVLRACGHLRDLSL 325
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+ I+ ++LK GF V + L+D+YAK G MIT
Sbjct: 326 AKYIYNYMLKAGFVLESTVRNILIDVYAKCG---------------------DMIT---- 360
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+R +F M+ KD++SW ++I+G +Q+G EA+ LF+ M + D T+ +
Sbjct: 361 ------ARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLML 414
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
++ L L+ GK +H+ I++ ++ V +AL+DMY KC + + +F +M +
Sbjct: 415 ISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDT 474
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+W ++ + G +++ M+++ + PD T + CA+LA+ G + H
Sbjct: 475 VTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCC 534
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
L G S + + NAL+ Y KCG +E+S R+F M+ RD V+WT ++ Y +G+ +
Sbjct: 535 LLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKA 594
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++ F M G+ PD V I ++ ACS +GLV++G FE M Y I P+ +HY C++D
Sbjct: 595 LETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVD 654
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+LSR+ ++ +A+ FI MP PDA WA++L +CR G++E + + ++EL+P +P
Sbjct: 655 LLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGY 714
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
+L S+ YA+ KWD VS +R+++++K + K+PG SWI+ VH+FS+ D S+P S+ I
Sbjct: 715 SILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAI 774
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDV-ELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
Y LE L M KEGY+PD V ++ E EK +++ HSE+LAIAFGLL PG P++
Sbjct: 775 YKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQ 834
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V+KNLRVC DCH TK ISKI REILVRDA RFHLFK+G CSC D W
Sbjct: 835 VMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 149/491 (30%), Positives = 236/491 (48%), Gaps = 40/491 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN LISG++SHG +A+++Y+ LK+ T S++L + V
Sbjct: 167 MPVRDLVSWNSLISGYSSHGYYEEALEIYH-ELKNSWIVPDSFTVSSVLPAFGNLLVVKQ 225
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +HG LK G S V V + LV MY K DA+R FDE+ ++ V YNTMI G L+
Sbjct: 226 GQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLK 285
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+VEES R+F E +D F+ D T SV
Sbjct: 286 LEMVEESVRMF------------------------LENLDQFKP--------DLLTVSSV 313
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L ACG L L K I+ ++++ V + L+D+Y KC + A VF +M K+
Sbjct: 314 LRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDT 373
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW +++ GY Q+G EA+K+F M + D T +IS LA L+ G H
Sbjct: 374 VSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSN 433
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ +G+ ++VSNAL+ Y KCG + DS ++F+ M D V+W ++S +FG
Sbjct: 434 GIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATG 493
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ + +M + PD T + L C+ G+ +++ +G +I+
Sbjct: 494 LQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQIGNALIE 552
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN--P 478
+ S+ G LE + +M D + W ++ + ++G G+ A E+ +++ P
Sbjct: 553 MYSKCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGE---GEKALETFADMEKSGIVP 608
Query: 479 ASYVLLSSIYA 489
S V ++ IYA
Sbjct: 609 DSVVFIAIIYA 619
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 229/462 (49%), Gaps = 35/462 (7%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P + WN +I + +G +A++ Y L++ + + TF +++ + ++G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYG-KLRESKVSPDKYTFPSVIKACAGLFDAEMG 125
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
++ IL GF S +FVG+ LVDMY+++GL+ A++ FDE+P +++V +N++I+G
Sbjct: 126 DLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSH 185
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G E EA++++ E++ + D FT SVL
Sbjct: 186 GYYE-------------------------------EALEIYHELKNSWIVPDSFTVSSVL 214
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
A G LL +++G+ +H F +++ V V + LV MY K + A VF M ++ V
Sbjct: 215 PAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSV 274
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
S+ M+ GY + EE+V++F + +PD T+ SV+ +C +L L +
Sbjct: 275 SYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYM 333
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
L G + TV N L+ Y KCG++ + +FN M +D VSW +++SGY + G E +
Sbjct: 334 LKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAM 393
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
LF+ M+ + D +T + ++S +R ++ G+ +K GI +ID+
Sbjct: 394 KLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKS-GICIDLSVSNALIDM 452
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
++ G + ++ + M D + W T++S+C G+ G
Sbjct: 453 YAKCGEVGDSLKIFSSMG-TGDTVTWNTVISACVRFGDFATG 493
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 205/408 (50%), Gaps = 46/408 (11%)
Query: 51 MSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL-PEKNIV 109
+SSS +L R+IH ++ G S F L+D Y+ + F + P KN+
Sbjct: 14 LSSSSNLNEL-RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVY 72
Query: 110 MYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG 169
+ W ++I +NGL EA++ + ++R
Sbjct: 73 L-------------------------------WNSIIRAFSKNGLFPEALEFYGKLRESK 101
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
++ D++TF SV+ AC GL E G ++ I+ + ++FVG+ALVDMY + + A
Sbjct: 102 VSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRAR 161
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
VF M +++VSW +++ GY +G EEA++I+ ++ + I PD FT+ SV+ + NL
Sbjct: 162 QVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLL 221
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
+++G HG +L +G+ S + V+N LV Y K D+ R+F+EM+VRD VS+ ++
Sbjct: 222 VVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMIC 281
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK----- 404
GY K E++ +F + L KPD +T+ VL AC + ++ + M+K
Sbjct: 282 GYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVL 340
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
E +R I +ID+ ++ G + A+ N M D + W +++S
Sbjct: 341 ESTVRNI------LIDVYAKCGDMITARDVFNSMEC-KDTVSWNSIIS 381
>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
Length = 677
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/639 (35%), Positives = 362/639 (56%), Gaps = 37/639 (5%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN L+S H+ G+ A++V+ + N + TF+ L + +D +
Sbjct: 76 WNGLLSAHSRAGAPGAALRVFRALPSSARPNST--TFTLTLTACARLGDLDAAESVRVRA 133
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
G+G VFV S L+ +Y+ R G +EE+
Sbjct: 134 FAAGYGHDVFVCSALLHLYS-------------------------------RCGAMEEAI 162
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
R+F GM KD ++W+TM+ G + G EA+ ++ MR G++ D+ V+ AC
Sbjct: 163 RVFDGMPRKDRVAWSTMVAGFVTAGRPVEALAMYSRMREHGVSDDEVVMVGVIQACMSTG 222
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
G +H ++R+ + +V ++LV MY K + A VFR M ++N V+W+A++
Sbjct: 223 NARIGASVHGRLLRHCMRMDVVTTTSLVSMYAKNGHLDVACQVFRMMPYRNDVTWSALIS 282
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
G+ QNG + EA+ +F +Q +G++P + L S + +CA++ L+ G HG ++ L
Sbjct: 283 GFAQNGRAVEALDLFRELQADGLQPCSWALVSALLACASVGFLKLGKSIHG-FILRRLEW 341
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
+ A++ Y KCG++E + +LFN+++ RD V W A+++ G ++ + LF+++
Sbjct: 342 QCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAIIACCGTHGCGHDALALFQELN 401
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
G+KPD T +LSA S +GLVE+G+ +F+ M+KE+GI P HY C++D+L+R+G +
Sbjct: 402 ETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMIKEFGIEPAEKHYVCIVDLLARSGLV 461
Query: 429 EEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIY 488
EEA + M P W LLS C + +E+G+ A+ +LEL P + L+S++Y
Sbjct: 462 EEANDMLASMQTEPTIAIWVILLSGCLNNKKLELGETIAKKILELRPEDIGVLALVSNLY 521
Query: 489 ASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLN 548
A+ KWD V ++R+ M++ G +K PG S I+ K H F +D S P +I + KLN
Sbjct: 522 AAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVKGTRHAFVMEDQSHPQHREILKMVAKLN 581
Query: 549 RKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCS 608
+M K GYVP V HD+ ++ ++L++HSE+LAIAFGLL PG + ++KNLRVC
Sbjct: 582 SEMRKLGYVPRTEFVYHDL---DEDQLLSYHSERLAIAFGLLNTSPGTRLVIIKNLRVCG 638
Query: 609 DCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
DCH+A KYISKI REI+VRDA RFH FK+G CSCGD+W
Sbjct: 639 DCHDAIKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 677
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 116/259 (44%), Gaps = 43/259 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP+ + V+W+ LISG A +G +A+ ++ + DGL S S +L +S + L
Sbjct: 269 MPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALVSALLACASV-GFLKL 327
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ IHG IL+ +G+ ++DMY+K G + A++ F++L +++V+
Sbjct: 328 GKSIHGFILR-RLEWQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVL---------- 376
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
W +I +G +A+ LF+E+ G+ D TF S+
Sbjct: 377 ---------------------WNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASL 415
Query: 181 LTACGGLLALEEGK-----QIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
L+A +EEGK I F I K V +VD+ + ++ A + +M
Sbjct: 416 LSALSHSGLVEEGKFWFDRMIKEFGIEPAEKHYV----CIVDLLARSGLVEEANDMLASM 471
Query: 236 AWKNVVS-WTAMLVGYGQN 253
+ ++ W +L G N
Sbjct: 472 QTEPTIAIWVILLSGCLNN 490
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/542 (39%), Positives = 325/542 (59%)
Query: 106 KNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM 165
+N+++ N ++ ++++ LF GM +DS+SW+ M+ G + G FRE+
Sbjct: 768 QNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFREL 827
Query: 166 RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI 225
G D +T V+ AC L L+ G+ IH + + + FV +ALVDMY KC+ I
Sbjct: 828 IRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREI 887
Query: 226 KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
+ A +F M +++V+WT M+ GY + G + E++ +F M+ G+ PD + +V+ +C
Sbjct: 888 EDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFAC 947
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
A L ++ + + + A++ + KCG +E + +F+ M ++ +SW+
Sbjct: 948 AKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWS 1007
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE 405
A+++ Y G+ + +DLF ML G+ P+++TL+ +L ACS AGLVE+G +F M ++
Sbjct: 1008 AMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWED 1067
Query: 406 YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKW 465
Y +R HYTC++D+L RAGRL+EA I M D W L +CR H +V + +
Sbjct: 1068 YSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKDVXLAEK 1127
Query: 466 AAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVH 525
AA SLLEL P NP Y+LLS+IYA+ G+W+ V+++R M ++ ++K PG +WI+ ++ H
Sbjct: 1128 AATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKIPGWTWIEVDNKSH 1187
Query: 526 IFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAI 585
FS D + P S +IY L+ L K+ GYVPD + VLHDV+ KI +L HSEKLAI
Sbjct: 1188 QFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAI 1247
Query: 586 AFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGD 645
AFGL+ P PIR++KNLRVC DCH K +S IT R I+VRDA RFH FK G CSCGD
Sbjct: 1248 AFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGD 1307
Query: 646 FW 647
+W
Sbjct: 1308 YW 1309
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/500 (38%), Positives = 295/500 (59%)
Query: 106 KNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM 165
+NIV+ N +I ++++ LF GM +DS+SW+ M+ G + G FRE+
Sbjct: 92 ENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFREL 151
Query: 166 RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI 225
G D +T V+ AC L L+ G+ IH + + + FV +ALVDMY KC+ I
Sbjct: 152 IRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREI 211
Query: 226 KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
+ A +F M +++V+WT M+ GY + G + E++ +F M+ G+ PD + +V+ +C
Sbjct: 212 EDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFAC 271
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
A L ++ + + + A++ Y KCG +E + +F+ M ++ +SW+
Sbjct: 272 AKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWS 331
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE 405
A+++ Y G+ + +DLF MLS G+ PD++TL +L ACS AGLVE+G +F M ++
Sbjct: 332 AMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWED 391
Query: 406 YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKW 465
Y +R HYTC++D+L RAGRL+EA I M D W L +CR H +V + +
Sbjct: 392 YSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEK 451
Query: 466 AAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVH 525
AA SLLEL NP YVLLS+IYA+ G+W+ V+++R M ++ ++K PG +WI+ ++ H
Sbjct: 452 AATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSH 511
Query: 526 IFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAI 585
FS D + P S +IY L+ L+ K+ GYVPD + VLHDV+ KI +L HSEKLAI
Sbjct: 512 QFSVGDTTHPRSKEIYEMLKSLSNKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAI 571
Query: 586 AFGLLFIPPGLPIRVVKNLR 605
AFGL+ P PIR++KNLR
Sbjct: 572 AFGLIATPEHTPIRIIKNLR 591
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 171/356 (48%), Gaps = 42/356 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSW++++ G A G + + +++ G T ++ + + +
Sbjct: 120 MCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCG-ARPDNYTLPFVIRACRDLKNLQM 178
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR IH + KFG FV + LVDMY K I DA+ FD++ E+++V + MI G
Sbjct: 179 GRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAE 238
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G ES + LF +MR EG+ D+ +V
Sbjct: 239 CGKANES-------------------------------LVLFEKMREEGVVPDKVAMVTV 267
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ AC L A+ + + I +I R + +V +G+A++DMY KC ++ A +F M KNV
Sbjct: 268 VFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNV 327
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SW+AM+ YG +G +A+ +F M +G+ PD TL S++ +C++ +EEG +F
Sbjct: 328 ISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSS 387
Query: 301 -----SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALVSG 350
S+ T + + V + L G+ G ++++ +L M + +DE W A +
Sbjct: 388 MWEDYSVRTDVKHYTCVVDLL----GRAGRLDEALKLIKSMTIEKDEGLWGAFLGA 439
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 148/271 (54%), Gaps = 4/271 (1%)
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
L + +Q+HA + +N+ V + L+ Y +++ A +F M ++ VSW+ M+ G
Sbjct: 75 LTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGG 134
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
+ + G F + R G PD++TL VI +C +L +L+ G H GL
Sbjct: 135 FAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLD 194
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
V ALV Y KC IED+ LF++M RD V+WT ++ GYA+ GKANE++ LFEKM
Sbjct: 195 HFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMRE 254
Query: 370 HGLKPDEVTLIGVLSACSRAGLVEKGRHYFE-IMVKEYGIRPIHDHYTCMIDILSRAGRL 428
G+ PD+V ++ V+ AC++ G + K R + I K++ + I T MID+ ++ G +
Sbjct: 255 EGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILG--TAMIDMYAKCGCV 312
Query: 429 EEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
E A+ ++M + I W+ ++++ HG
Sbjct: 313 ESAREIFDRME-EKNVISWSAMIAAYGYHGQ 342
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 168/352 (47%), Gaps = 34/352 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSW++++ G A G + + +++ G T ++ + + +
Sbjct: 796 MCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCG-ARPDNYTLPFVIRACRDLKNLQM 854
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR IH + KFG FV + LVDMY K I DA+ FD++ E+++V + MI G
Sbjct: 855 GRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGG--- 911
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ G E++ LF +MR EG+ D+ +V
Sbjct: 912 ----------------------------YAECGNANESLVLFDKMREEGVVPDKVAMVTV 943
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ AC L A+ + + I +I R + +V +G+A++DM+ KC ++ A +F M KNV
Sbjct: 944 VFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNV 1003
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SW+AM+ YG +G +A+ +F M R+GI P+ TL S++ +C++ +EEG +F
Sbjct: 1004 ISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSX 1063
Query: 301 SLVTGLISF-ITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALVSG 350
+ + +V G+ G ++++ +L M +DE W A +
Sbjct: 1064 MWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGA 1115
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 146/271 (53%), Gaps = 4/271 (1%)
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
L + +Q+H + N+ V + LV Y +++ A +F M ++ VSW+ M+ G
Sbjct: 751 LTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGG 810
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
+ + G F + R G PD++TL VI +C +L +L+ G H GL
Sbjct: 811 FAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLD 870
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
V ALV YGKC IED+ LF++M RD V+WT ++ GYA+ G ANE++ LF+KM
Sbjct: 871 HFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMRE 930
Query: 370 HGLKPDEVTLIGVLSACSRAGLVEKGRHYFE-IMVKEYGIRPIHDHYTCMIDILSRAGRL 428
G+ PD+V ++ V+ AC++ G + K R + I K++ + I T MID+ ++ G +
Sbjct: 931 EGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILG--TAMIDMHAKCGCV 988
Query: 429 EEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
E A+ ++M + I W+ ++++ HG
Sbjct: 989 ESAREIFDRME-EKNVISWSAMIAAYGYHGQ 1018
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 101/192 (52%), Gaps = 12/192 (6%)
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE 341
IS+ N +L + Q H ++ V G++ I V+N L+ FY ++D++ LF+ M VRD
Sbjct: 66 ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 125
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEI 401
VSW+ +V G+AK G F +++ G +PD TL V+ AC ++ GR I
Sbjct: 126 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHI 185
Query: 402 MVKEYGIRPIHDHYTC--MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+ K +G+ DH+ C ++D+ + +E+A+ +KM D + W + I G
Sbjct: 186 VYK-FGLDL--DHFVCAALVDMYVKCREIEDARFLFDKMQ-ERDLVTWTVM-----IGGY 236
Query: 460 VEIGKWAAESLL 471
E GK A ESL+
Sbjct: 237 AECGK-ANESLV 247
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 97/188 (51%), Gaps = 12/188 (6%)
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
+L + Q H ++ V G++ + V+N LV FY ++D++ LF+ M VRD VSW+ +V
Sbjct: 749 TNLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMV 808
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
G+AK G F +++ G +PD TL V+ AC ++ GR I+ K +G+
Sbjct: 809 GGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYK-FGL 867
Query: 409 RPIHDHYTC--MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWA 466
DH+ C ++D+ + +E+A+ +KM D + W + I G E G A
Sbjct: 868 DL--DHFVCAALVDMYGKCREIEDARFLFDKM-XERDLVTWTVM-----IGGYAECGN-A 918
Query: 467 AESLLELD 474
ESL+ D
Sbjct: 919 NESLVLFD 926
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/652 (36%), Positives = 360/652 (55%), Gaps = 49/652 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P V+WN+++ +A + +A ML+ G+ ++F+++L SS C
Sbjct: 501 LPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLP-DALSFTSVL---SSCYCSQE 556
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+ + IL+ G+ S + + L+ M+ + + A+ FDE
Sbjct: 557 AQVLRMCILESGYRSAC-LETALISMHGRCRELEQARSVFDE------------------ 597
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
M D +SWT M++ +N +E LFR M+LEG+ D+FT +
Sbjct: 598 -------------MDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATT 644
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C L GK IHA + + ++ V +AL++MY C + A S F TM +++
Sbjct: 645 LDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDL 704
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW M Y Q G ++EAV +F +MQ G++PD T + ++ A + +G FHG
Sbjct: 705 VSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGL 764
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT-----ALVSGYAKFG 355
+ +GL S ++V+ LV Y KCG ++++ LF R WT A++ A+ G
Sbjct: 765 AAESGLDSDVSVATGLVKLYAKCGKLDEAISLF-----RGACQWTVVLLNAIIGALAQHG 819
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
+ E + +F KM G++PD TL+ ++SAC AG+VE+G F M + +GI P +HY
Sbjct: 820 FSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHY 879
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
C +D+L RAG+LE A+ I KMPF + + W +LL +C++ G+ E+G+ A+ +LELDP
Sbjct: 880 ACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDP 939
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSP 535
+N A++V+LS+IY + GKW R+ + ++ V+ PG SW++ +VH F A D S P
Sbjct: 940 HNSAAHVVLSNIYCATGKWKDADVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHP 999
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
+D+IY L+KL M + GY D D E K K L +HSE++AIAFGL+ PP
Sbjct: 1000 QTDEIYVVLDKLELLMRRAGYEADKG---LDAEDELKEKALGYHSERIAIAFGLIATPPD 1056
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+++VKNLRVC DCH ATKYIS I REI+VRD++RFH F NG CSC D W
Sbjct: 1057 TTLKIVKNLRVCGDCHTATKYISMIMGREIIVRDSLRFHHFSNGTCSCKDCW 1108
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 142/541 (26%), Positives = 233/541 (43%), Gaps = 80/541 (14%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +SWN ++ S V ++ ML G+ + ++++F +L S+ +D GR+I
Sbjct: 401 DVISWNTMLGASEDRKSFGKVVNTFHHMLLAGI-DPNKVSFIAILNACSNSEALDFGRKI 459
Query: 65 HGHILKFGFGSYV--FVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
H IL YV V + LV MY K G I +A+ F E+P
Sbjct: 460 HSLILTRR-RDYVESSVATMLVSMYGKCGSIAEAELVFKEMP------------------ 500
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
+ + ++W M+ QN +EA EM G+ D +F SVL+
Sbjct: 501 -----------LPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLS 549
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
+C +E + + I+ + ++ + + +AL+ M+ +C+ ++ A SVF M +VVS
Sbjct: 550 SC---YCSQEAQVLRMCILESGYR-SACLETALISMHGRCRELEQARSVFDEMDHGDVVS 605
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL 302
WTAM+ +N +E +F MQ G+ PD FTL + + +C + +L G H
Sbjct: 606 WTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVT 665
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
GL + I V NAL+ Y CG+ ++ F M RD VSW + + YA+ G A E +
Sbjct: 666 EIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVL 725
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL 422
LF M G+KPD++T L+ + LV G+ F + E G+ T ++ +
Sbjct: 726 LFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGK-LFHGLAAESGLDSDVSVATGLVKLY 784
Query: 423 SRAGRLEEAKSF----------------------------------INKMPFPPDAIGWA 448
++ G+L+EA S + + PD
Sbjct: 785 AKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLV 844
Query: 449 TLLSSCRIHGNVEIGKWAAESLLELDPYNPAS-----YVLLSSIYASKGKWDHVSQLRRT 503
+++S+C G VE G S L + Y S Y + G+ +H Q+ R
Sbjct: 845 SIISACGHAGMVEEG---CSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRK 901
Query: 504 M 504
M
Sbjct: 902 M 902
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 149/588 (25%), Positives = 264/588 (44%), Gaps = 77/588 (13%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW LIS +A G+ A ++ ML + + T ML ++ R + +GR IH
Sbjct: 92 VSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHA 151
Query: 67 HILKFGF----GSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
I + G + VG+ +++MYAK G DA F +PEK++V + M G
Sbjct: 152 MIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMA------G 205
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
+ RR + +A+ +FREM L+ LA + TF +T
Sbjct: 206 AYAQERRFY------------------------PDALRIFREMLLQPLAPNVITF---IT 238
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK---N 239
A G +L +G +H+ + + G+AL++MY KC + A VF+ MA + +
Sbjct: 239 ALGACTSLRDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELD 298
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS-CANLASLEEGTQFH 298
+VSW AM+ + G +A+ IF ++ G+ P+ TL +++++ A+ +FH
Sbjct: 299 LVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFH 358
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKA 357
GR +G + + V NA+++ Y KCG + +F + + D +SW ++
Sbjct: 359 GRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSF 418
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
+ ++ F ML G+ P++V+ I +L+ACS + ++ GR +++ T
Sbjct: 419 GKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATM 478
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDA-IGWATLLSSCRIHGNVEIGKWAAESLLEL--- 473
++ + + G + EA+ +MP P + + W +L + + + K A +L+E+
Sbjct: 479 LVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGA---YAQNDRSKEAFGALMEMLQG 535
Query: 474 --DPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGC---SWIKYKSRVH--- 525
P + +LSS Y S+ LR + E G R C + I R
Sbjct: 536 GVLPDALSFTSVLSSCYCSQ----EAQVLRMCILESGYRS--ACLETALISMHGRCRELE 589
Query: 526 ----IFSADD------WSSPYS----DQIYAELEKLNRKMIKEGYVPD 559
+F D W++ S ++ + E+ L R+M EG +PD
Sbjct: 590 QARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPD 637
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 183/358 (51%), Gaps = 12/358 (3%)
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
E+++ + N +I +R G +EE+ +F M++++ +SWT +I+ Q+G A LFR
Sbjct: 57 EQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRT 116
Query: 165 MRLEGLAM-DQFTFGSVLTACGGLLALEEGKQIHAFI----IRNDHKDNVFVGSALVDMY 219
M LE A + +T ++L AC L G+ IHA I + + VG+A+++MY
Sbjct: 117 MLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMY 176
Query: 220 CKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQN-GCSEEAVKIFCNMQRNGIEPDDFTL 278
KC S + A +VF T+ K+VVSWTAM Y Q +A++IF M + P+ T
Sbjct: 177 AKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITF 236
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
+ + +C SL +GT H GL NAL+ YGKCG+ E ++ +F M
Sbjct: 237 ITALGAC---TSLRDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMAS 293
Query: 339 RDE---VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG 395
R E VSW A++S + G+ + + +F ++ G++P+ VTLI +L+A + +G+
Sbjct: 294 RQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGA 353
Query: 396 RHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
F + E G +I + ++ G A + ++ + D I W T+L +
Sbjct: 354 ARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGA 411
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 209/452 (46%), Gaps = 51/452 (11%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGL--GNLSRITFSTMLIMSSSRRCVDLG- 61
D VSWN +IS G DA+ ++ + +G+ +++ IT L S VD G
Sbjct: 298 DLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASG----VDFGA 353
Query: 62 -RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
R+ HG I + G+ V VG+ ++ MYAK G A
Sbjct: 354 ARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAA------------------------ 389
Query: 121 RGLVEESRRLFRGMKDK-DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+FR ++ K D ISW TM+ + ++ F M L G+ ++ +F +
Sbjct: 390 -------WTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIA 442
Query: 180 VLTACGGLLALEEGKQIHAFII--RNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
+L AC AL+ G++IH+ I+ R D+ ++ V + LV MY KC SI AE VF+ M
Sbjct: 443 ILNACSNSEALDFGRKIHSLILTRRRDYVESS-VATMLVSMYGKCGSIAEAELVFKEMPL 501
Query: 238 --KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
+++V+W ML Y QN S+EA M + G+ PD + SV+SSC +E
Sbjct: 502 PSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC---YCSQEAQ 558
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
L +G S + AL++ +G+C +E + +F+EM+ D VSWTA+VS A+
Sbjct: 559 VLRMCILESGYRS-ACLETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENR 617
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
E LF +M G+ PD+ TL L C + + G+ V E G+
Sbjct: 618 DFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGK-IIHACVTEIGLEADIAVE 676
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGW 447
++++ S G EA SF M D + W
Sbjct: 677 NALLNMYSNCGDWREALSFFETMK-ARDLVSW 707
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 214/460 (46%), Gaps = 46/460 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSV-NDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
+P D VSW + +A DA++++ ML L + ITF T L +S R
Sbjct: 192 IPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAP-NVITFITALGACTSLR--- 247
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G +H + + G G G+ L++MY K G A F + +
Sbjct: 248 DGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASR------------- 294
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
++ D +SW MI+ ++ G +A+ +FR +RLEG+ + T +
Sbjct: 295 ---------------QELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLIT 339
Query: 180 VLTACGGL-LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
+L A + ++ H I + + +V VG+A++ MY KC A +VFR + WK
Sbjct: 340 ILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWK 399
Query: 239 -NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
+V+SW ML + V F +M GI+P+ + +++++C+N +L+ G +
Sbjct: 400 CDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKI 459
Query: 298 HGRSLVTGLISFI--TVSNALVTFYGKCGNIEDSHRLFNEMNV--RDEVSWTALVSGYAK 353
H ++T ++ +V+ LV+ YGKCG+I ++ +F EM + R V+W ++ YA+
Sbjct: 460 HSL-ILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQ 518
Query: 354 FGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
++ E +ML G+ PD ++ VLS+C + + + E G R
Sbjct: 519 NDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC----YCSQEAQVLRMCILESGYRSACL 574
Query: 414 HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
T +I + R LE+A+S ++M D + W ++S+
Sbjct: 575 E-TALISMHGRCRELEQARSVFDEMDH-GDVVSWTAMVSA 612
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 175/376 (46%), Gaps = 26/376 (6%)
Query: 171 AMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAES 230
A D + ++L +C L +GK+ H I + ++F+G+ L++MY +C S++ A +
Sbjct: 22 AADLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHA 81
Query: 231 VFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLA 289
+F M +NVVSWTA++ Q+G A +F M + P+ +TL +++++CAN
Sbjct: 82 IFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSR 141
Query: 290 SLEEGTQFHGRSLVTGL----ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
L G H GL + V NA++ Y KCG+ ED+ +F + +D VSWT
Sbjct: 142 DLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWT 201
Query: 346 ALVSGYAKFGK-ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
A+ YA+ + + + +F +ML L P+ +T I L AC+ + + ++
Sbjct: 202 AMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSL----RDGTWLHSLLH 257
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPP--DAIGWATLLSSCRIHGNVEI 462
E G+ +I++ + G E A M D + W ++S+ +VE
Sbjct: 258 EAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISA-----SVEA 312
Query: 463 GK----WAAESLLELDPYNPASYVL---LSSIYASKGKWDHVSQLRRTMREKGVRKD--P 513
G+ A L L+ P S L L+++ AS + + + E G +D
Sbjct: 313 GRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVV 372
Query: 514 GCSWIKYKSRVHIFSA 529
G + I ++ FSA
Sbjct: 373 GNAIISMYAKCGFFSA 388
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 240/644 (37%), Positives = 357/644 (55%), Gaps = 34/644 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNL--SRITFSTMLIMSSSRRCVDLGRQI 64
VSWN ++ G ++ G ++ + ML G G+L +T + + + +++
Sbjct: 356 VSWNTMVGGFSAAGDIHKTFDLLRQMLAGG-GDLRADEVTILNAVPVCFEESVLPNLKEL 414
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H + LK E N ++ N + + G +
Sbjct: 415 HCYSLK------------------------------QEFVHNNELVANAFVASYAKCGSL 444
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ R+F ++ K SW +I G Q+ R ++D + +M+ GL D FT S+L+AC
Sbjct: 445 SYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSAC 504
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+ +L+ GK++H IIRN + + FV +L+ +Y C + A +F M K +VSW
Sbjct: 505 SQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWN 564
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
M+ GY QNG E A+ +F M G++P + ++ SV +C+ L SL G + HG +L
Sbjct: 565 TMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKC 624
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
L ++ +++ Y K G++ +S ++FN + R SW A+V GY G+A E I LF
Sbjct: 625 LLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLF 684
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
E+M G PDE+T +GVL+AC+ +GLV +G Y + M +G+ P HY C+ID+L R
Sbjct: 685 EEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVR 744
Query: 425 AGRLEEA-KSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
AG+L+EA K +M P W LLSSCRIH N+E+G+ A L +P P +YVL
Sbjct: 745 AGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVL 804
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LS++YA GKWD V ++R+ M+E +RKD GCSWI+ +V F A + S ++I +
Sbjct: 805 LSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSWIELNGKVFSFVAGESSLDGFEEIKSL 864
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
L R++ K GY PD SSV HD+ EK + L HSEKLAI +GL+ G +RV KN
Sbjct: 865 WSVLEREIGKMGYRPDTSSVQHDLSEEEKTEQLRGHSEKLAITYGLIRTSEGTTLRVYKN 924
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LR+C DCHNA K ISK+ +REI+VRD RFH FKNG CSCGD+W
Sbjct: 925 LRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGFCSCGDYW 968
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 166/342 (48%), Gaps = 37/342 (10%)
Query: 52 SSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMY 111
S R+ + LGR+IH LV A+L D L + I MY
Sbjct: 91 SGRRKDIQLGRKIH----------------QLVSESARLS-------NDDVLCTRVITMY 127
Query: 112 NTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GL 170
+ G ++SR +F ++ K+ W +I+ +N L +++F +M E GL
Sbjct: 128 SMC-------GSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMITESGL 180
Query: 171 AMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAES 230
D FTF V+ AC G+ ++ G +H +++ ++VFV +ALV Y S+ A
Sbjct: 181 LPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALR 240
Query: 231 VFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE----PDDFTLGSVISSCA 286
VF+ M +N+VSW +M+ + NG SEE + M E PD TL +V+ CA
Sbjct: 241 VFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCA 300
Query: 287 NLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTA 346
+ G HG ++ L + V+NAL+ Y KCG I D+ +F N ++ VSW
Sbjct: 301 RDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNT 360
Query: 347 LVSGYAKFGKANETIDLFEKMLSHG--LKPDEVTLIGVLSAC 386
+V G++ G ++T DL +ML+ G L+ DEVT++ + C
Sbjct: 361 MVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVC 402
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 202/450 (44%), Gaps = 38/450 (8%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN +IS ++ + ++ ++++ M+ + TF ++ + V +G +HG +
Sbjct: 151 WNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLV 210
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+K VFV + LV Y G + DA R F +PE+N+V +N+MI GL EE
Sbjct: 211 VKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECF 270
Query: 129 RLFRGMKDK-DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
L M +K D I++T D T +VL C
Sbjct: 271 LLLGQMMEKDDEIAFTP----------------------------DVATLATVLPVCARD 302
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
+ GK +H ++ V V +AL+DMY KC I A+ +F+ KNVVSW M+
Sbjct: 303 REIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMV 362
Query: 248 VGYGQNGCSEEAVKIFCNMQRNG--IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
G+ G + + M G + D+ T+ + + C + L + H SL
Sbjct: 363 GGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQE 422
Query: 306 LI-SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
+ + V+NA V Y KCG++ +HR+F + + SW AL+ GY++ ++D +
Sbjct: 423 FVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAY 482
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH--YTCMIDIL 422
+M S GL PD T+ +LSACS+ ++ G+ ++++ R D Y ++ +
Sbjct: 483 FQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRN---RLERDSFVYISLLSLY 539
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
G L A + M + W T+++
Sbjct: 540 IHCGELSTAHVLFDAME-DKTLVSWNTMVN 568
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 141/278 (50%), Gaps = 10/278 (3%)
Query: 190 LEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
++ G++IH + + D+V + ++ MY C S + SVF + KN+ W A++
Sbjct: 97 IQLGRKIHQLVSESARLSNDDVLC-TRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVI 155
Query: 248 VGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
Y +N +++F M +G+ PD+FT V+ +CA ++ ++ G HG + T L
Sbjct: 156 SSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRL 215
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ + VSNALV+FYG G++ D+ R+F M R+ VSW +++ ++ G + E L +
Sbjct: 216 VEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQ 275
Query: 367 MLSH----GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL 422
M+ PD TL VL C+R + G+ + +K + + + ++D+
Sbjct: 276 MMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVN-NALMDMY 334
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
S+ G + +A+ I K+ + + W T++ G++
Sbjct: 335 SKCGCINDAQ-VIFKLNNNKNVVSWNTMVGGFSAAGDI 371
>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/545 (39%), Positives = 341/545 (62%), Gaps = 4/545 (0%)
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
E + M N ++ ++ G++ ++ RLF M ++++SW T+I+G + +G EA LF
Sbjct: 164 EPDQYMRNRVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFIL 223
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
MR E TF +++ A GL + G+Q+H+ I+ ++FV AL+DMY KC S
Sbjct: 224 MREEFYDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGS 283
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
++ A VF M K +V W +++ GY +G SEEA+ ++ M+ +G++ D FT +I
Sbjct: 284 LEDAHCVFDEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRI 343
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
C+ LAS+ Q H + G + + ALV FY K G ++D+ +F+ M+ R+ +SW
Sbjct: 344 CSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISW 403
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
AL++GY G E ID+FEKML G+ P+ VT + VLSACS +GL E+G F+ M +
Sbjct: 404 NALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTR 463
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
++ ++P H+ CMI++L R G L+EA + I K PF P A WA LL +CR+HGN+E+GK
Sbjct: 464 DHKVKPRAMHFACMIELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHGNLELGK 523
Query: 465 WAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRV 524
+AAE L ++P ++Y++L +IY S GK + + +T++ KG+R P CSWI+ ++
Sbjct: 524 FAAEKLYGMEPEKLSNYIVLLNIYNSSGKLKEAADVFQTLKRKGLRMLPACSWIEVNNQP 583
Query: 525 HIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSS-VLHDV-ELSEKIKMLNHHSEK 582
H F + D +++ ++++L + K GYVP+ + +L DV E EKI+M +HSEK
Sbjct: 584 HAFLSGDKHHVQIEKVVGKVDELMLNISKLGYVPEEQNFMLPDVDENEEKIRM--YHSEK 641
Query: 583 LAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECS 642
LAIA+GLL P+++V++ R+CSDCH+ K I+ IT+REI++RDA RFH F++G CS
Sbjct: 642 LAIAYGLLNTLEKTPLQIVQSHRICSDCHSVIKLIAMITKREIVIRDASRFHHFRDGSCS 701
Query: 643 CGDFW 647
CGD+W
Sbjct: 702 CGDYW 706
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 206/412 (50%), Gaps = 38/412 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW +ISG+ G+ +A +++ LM ++ + TF+TM+ S+ +
Sbjct: 193 MPARNAVSWGTIISGYVDSGNYVEAFRLFILM-REEFYDCGPRTFATMIRASAGLEIIFP 251
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H +K G G +FV L+DMY+K G + DA FDE+P+K IV +N++I G
Sbjct: 252 GRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYAL 311
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G E EA+DL+ EMR G+ MD FTF +
Sbjct: 312 HGYSE-------------------------------EALDLYHEMRDSGVKMDHFTFSII 340
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ C L ++ KQ+HA ++RN +V +ALVD Y K + A VF M+ +N+
Sbjct: 341 IRICSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNI 400
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
+SW A++ GYG +G EEA+ +F M R G+ P+ T +V+S+C+ E G + F
Sbjct: 401 ISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQS 460
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKAN 358
+ + ++ G+ G +++++ L + + + W AL+ G N
Sbjct: 461 MTRDHKVKPRAMHFACMIELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHG--N 518
Query: 359 ETIDLFEKMLSHGLKPDEVT-LIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
+ F +G++P++++ I +L+ + +G +++ F+ + K G+R
Sbjct: 519 LELGKFAAEKLYGMEPEKLSNYIVLLNIYNSSGKLKEAADVFQTL-KRKGLR 569
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 173/327 (52%), Gaps = 5/327 (1%)
Query: 137 KDSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQFTFGSVLTACGGLLALEEGKQ 195
K S+ + I L+ R+A+++F LE G + T+ +++ AC GL ++ K+
Sbjct: 94 KSSVGICSQIEKLVLCKKYRDALEMFEIFELEDGFHVGYSTYDALINACIGLKSIRGVKR 153
Query: 196 IHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGC 255
+ +++ N + + ++ + ++ M+ KC + A +F M +N VSW ++ GY +G
Sbjct: 154 LCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGN 213
Query: 256 SEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNA 315
EA ++F M+ + T ++I + A L + G Q H ++ GL I VS A
Sbjct: 214 YVEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCA 273
Query: 316 LVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPD 375
L+ Y KCG++ED+H +F+EM + V W ++++GYA G + E +DL+ +M G+K D
Sbjct: 274 LIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKMD 333
Query: 376 EVTLIGVLSACSRAGLVEKGRHYFEIMVKE-YGIRPIHDHYTCMIDILSRAGRLEEAKSF 434
T ++ CSR V + + +V+ +G+ + + T ++D S+ G++++A+
Sbjct: 334 HFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVAN--TALVDFYSKWGKVDDARHV 391
Query: 435 INKMPFPPDAIGWATLLSSCRIHGNVE 461
++M + I W L++ HG+ E
Sbjct: 392 FDRMS-CRNIISWNALIAGYGNHGHGE 417
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/508 (41%), Positives = 322/508 (63%), Gaps = 2/508 (0%)
Query: 142 WTTMITGLMQNGLEREAIDLFREMRLEGLA-MDQFTFGSVLTACGGLLALEEGKQIHAFI 200
W T+I G + G A L+REMR+ GL D T+ ++ A + + G+ IH+ +
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 201 IRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAV 260
IR+ ++V ++L+ +Y C + A VF M K++V+W +++ G+ +NG EEA+
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 261 KIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFY 320
++ M GI+PD FT+ S++S+CA + +L G + H + GL + SN L+ Y
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267
Query: 321 GKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS-HGLKPDEVTL 379
+CG +E++ LF+EM ++ VSWT+L+ G A G E I+LF+ M S GL P E+T
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 327
Query: 380 IGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP 439
+G+L ACS G+V++G YF M +EY I P +H+ CM+D+L+RAG++++A +I MP
Sbjct: 328 VGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP 387
Query: 440 FPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQ 499
P+ + W TLL +C +HG+ ++ ++A +L+L+P + YVLLS++YAS+ +W V +
Sbjct: 388 MQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQK 447
Query: 500 LRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPD 559
+R+ M GV+K PG S ++ +RVH F D S P SD IYA+L+++ ++ EGYVP
Sbjct: 448 IRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQ 507
Query: 560 MSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISK 619
+S+V DVE EK + +HSEK+AIAF L+ P PI VVKNLRVC+DCH A K +SK
Sbjct: 508 ISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSK 567
Query: 620 ITQREILVRDAVRFHLFKNGECSCGDFW 647
+ REI+VRD RFH FKNG CSC D+W
Sbjct: 568 VYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 191/395 (48%), Gaps = 40/395 (10%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN LI G+A G+ A +Y M GL T+ ++ ++ V LG IH +
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
++ GFGS ++V + L+ +YA G + A + FD++PE
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE----------------------- 184
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
KD ++W ++I G +NG EA+ L+ EM +G+ D FT S+L+AC +
Sbjct: 185 --------KDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIG 236
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
AL GK++H ++I+ N+ + L+D+Y +C ++ A+++F M KN VSWT+++V
Sbjct: 237 ALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIV 296
Query: 249 GYGQNGCSEEAVKIFCNMQRN-GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
G NG +EA+++F M+ G+ P + T ++ +C++ ++EG ++ R I
Sbjct: 297 GLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKI 356
Query: 308 S-FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKANETIDLFE 365
I +V + G ++ ++ M ++ V W L+ G ++ + F
Sbjct: 357 EPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFA 414
Query: 366 KMLSHGLKP----DEVTLIGVLSACSRAGLVEKGR 396
++ L+P D V L + ++ R V+K R
Sbjct: 415 RIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIR 449
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 157/289 (54%), Gaps = 11/289 (3%)
Query: 186 GLLALEEGKQIHAFIIRNDHK-DNVFVGSALVDMYCKCKS---IKYAESVFRTMAWK-NV 240
G+ ++ + +QIHAF IR+ + +G L+ S + YA VF + NV
Sbjct: 26 GVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINV 85
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQFHG 299
W ++ GY + G S A ++ M+ +G +EPD T +I + +A + G H
Sbjct: 86 FIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHS 145
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ +G S I V N+L+ Y CG++ ++++F++M +D V+W ++++G+A+ GK E
Sbjct: 146 VVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEE 205
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ L+ +M S G+KPD T++ +LSAC++ G + G+ M+K R +H ++
Sbjct: 206 ALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS-NVLL 264
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
D+ +R GR+EEAK+ ++M +++ W +L+ ++G GK A E
Sbjct: 265 DLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNG---FGKEAIE 309
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 133/287 (46%), Gaps = 42/287 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V+WN +I+G A +G +A+ +Y M G+ T ++L + + L
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGI-KPDGFTIVSLLSACAKIGALTL 240
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+++H +++K G + + L+D+YA+ G + +AK FDE+ +KN V + ++I GL
Sbjct: 241 GKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAV 300
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR-LEGLAMDQFTFGS 179
G +EAI+LF+ M EGL + TF
Sbjct: 301 NG-------------------------------FGKEAIELFKYMESTEGLLPCEITFVG 329
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVG--SALVDMYCKCKSIKYAESVFRTMAW 237
+L AC ++EG + + +R ++K + +VD+ + +K A ++M
Sbjct: 330 ILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPM 388
Query: 238 K-NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD---DFTLGS 280
+ NVV W +L +G S+ A F +Q +EP+ D+ L S
Sbjct: 389 QPNVVIWRTLLGACTVHGDSDLAE--FARIQILQLEPNHSGDYVLLS 433
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/625 (37%), Positives = 340/625 (54%), Gaps = 63/625 (10%)
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
+ LG+Q H I+ G F+ + +V MYA G + A FD + + ++YN++I
Sbjct: 93 IKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRA 152
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
R G ++ + M GL D FT
Sbjct: 153 YTRHGXXXXXX----------------------------XXLEAYARMHFLGLLGDNFTL 184
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK-------------- 223
VL +C L + G+ +H +R + + +VG++L+DMY KC
Sbjct: 185 PFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIV 244
Query: 224 -----------------SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM 266
I AE +F M +N+VSWTAM+ GY QNG +E+A+ +F M
Sbjct: 245 RDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEM 304
Query: 267 QRNGIE--PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCG 324
++G E P+ T+ SV+ +CA A+LE G + H + GL +V AL Y KC
Sbjct: 305 LQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCY 364
Query: 325 NIEDSHRLFN--EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGV 382
++ ++ F+ N ++ ++W +++ YA G E + +FE ML G++PD VT +G+
Sbjct: 365 SLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGL 424
Query: 383 LSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPP 442
LS CS +GL++ G ++F M + + P +HY C++D+L RAGRL EAK I++MP
Sbjct: 425 LSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQA 484
Query: 443 DAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRR 502
W LL++CR H N+EI + AA L L+P N +YVLLS++YA G W+ V +LR
Sbjct: 485 GPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRA 544
Query: 503 TMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSS 562
++ +G++K PGCSWI+ + H+F D S P + +IY LE L K+ GY+PD S
Sbjct: 545 LLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSF 604
Query: 563 VLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQ 622
VLHD+ EK L HSEKLAIAFGLL PG+ +RV KNLR+C DCH ATK+ISKI +
Sbjct: 605 VLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKFISKIYE 664
Query: 623 REILVRDAVRFHLFKNGECSCGDFW 647
REI+VRD RFH FK+G CSCGD+W
Sbjct: 665 REIIVRDLNRFHCFKDGSCSCGDYW 689
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/352 (31%), Positives = 181/352 (51%), Gaps = 12/352 (3%)
Query: 9 WNLLISGHASHGSVNDA---VKVYNLMLKDGL-GNLSRITFSTMLIMSSSRRCVDLGRQI 64
+N +I + HG ++ Y M GL G+ + F SR C +GR +
Sbjct: 146 YNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVC--MGRCV 203
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG L+ G +VG+ L+DMY K G+I DA++ FD++ +++ +N +I G ++ G +
Sbjct: 204 HGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEI 263
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM--DQFTFGSVLT 182
+ LF M+ ++ +SWT MI+G QNG +A+ LF EM +G M + T SVL
Sbjct: 264 GVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLP 323
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW--KNV 240
AC ALE G++IH F N V +AL MY KC S+ A F +A KN+
Sbjct: 324 ACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNL 383
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQFHG 299
++W M+ Y +GC EAV IF NM R G++PD T ++S C++ ++ G F+
Sbjct: 384 IAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFND 443
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSG 350
+ + + +V G+ G + ++ L ++M ++ S W AL++
Sbjct: 444 MGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAA 495
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 83/166 (50%), Gaps = 7/166 (4%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLG-NLSRITFSTMLIMSSSRRCVDLGRQIH 65
VSW +ISG+ +G A+ +++ ML+DG + +T ++L + ++ GR+IH
Sbjct: 279 VSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIH 338
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPE--KNIVMYNTMITGLLRRGL 123
G V + L MYAK + +A+ FD + + KN++ +NTMIT G
Sbjct: 339 DFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGC 398
Query: 124 VEESRRLFRGM----KDKDSISWTTMITGLMQNGLEREAIDLFREM 165
E+ +F M D++++ +++G +GL ++ F +M
Sbjct: 399 GVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDM 444
>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 762
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/661 (35%), Positives = 377/661 (57%), Gaps = 47/661 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + VSW L++G+ AV+V+ ML+ G + T T L SS +L
Sbjct: 130 LPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAG-AYPTNYTLGTALSASSDLHSKEL 188
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIHG+ +K+ +G+ L +Y+K G +
Sbjct: 189 GKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSL--------------------------- 221
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
E + + FR ++DK+ ISWTT+I+ NG + F EM E + ++FT S
Sbjct: 222 ----ECAVKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSA 277
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+ C + +L+ G QIH+ I+ + N+ + ++++ +Y KC I A+ +F M ++
Sbjct: 278 LSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISL 337
Query: 241 VSWTAMLVGYGQ-----------NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
V+W AM+ G+ + + C EA+ IF + R+G++PD FT SV+S C++L
Sbjct: 338 VTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLV 397
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
+LE+G Q H +++ TG +S + V ALV Y KCG+IE + + F EM++R +SWT++++
Sbjct: 398 ALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMIT 457
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
GYA+ G+ + + LFE M G++P+++T +GVLSACS AG+V++ YF++M EY I
Sbjct: 458 GYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKIT 517
Query: 410 PIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAES 469
P+ DHY C+ID+ R GRL+EA FI +M P+ W+ L++ CR G +E+G +AAE
Sbjct: 518 PVMDHYACLIDMFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCRSQGKLELGFYAAEQ 577
Query: 470 LLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSA 529
LL L P + +Y LL ++Y S GKW VS++R+ M+E+ + + SWI K +++ F
Sbjct: 578 LLNLKPKDTETYNLLLNMYLSAGKWKEVSRVRKMMKEEKLGRLKDWSWISIKDKIYSFKR 637
Query: 530 DDWSSPYSDQIYAELEKLNRKMIKEGY----VPDMSSVLHDVELSEKIKMLNHHSEKLAI 585
+ S S ++Y L L+ K GY +++ D + + + + +HSEKLAI
Sbjct: 638 NARSHAQSGEMYELLGNLHEKAKSFGYEWEESLEVTDEEEDADEEKALTSIVYHSEKLAI 697
Query: 586 AFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGD 645
AFGLL +PIRV K++ +C DCHN + IS ++ REI++RD+ R H F NG CSCGD
Sbjct: 698 AFGLLNTSNAVPIRVTKSISMCRDCHNFIRIISLLSAREIIIRDSKRLHKFINGHCSCGD 757
Query: 646 F 646
F
Sbjct: 758 F 758
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/409 (30%), Positives = 208/409 (50%), Gaps = 44/409 (10%)
Query: 55 RRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTM 114
++ V ++IH HI+K G F+ + LV++YAK G + A++ FDELP
Sbjct: 82 KKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARKVFDELP---------- 131
Query: 115 ITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
RR +V SWTT++TG + + A+ +FREM G
Sbjct: 132 -----RRNVV----------------SWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTN 170
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
+T G+ L+A L + E GKQIH + I+ + + +G++L +Y KC S++ A FR
Sbjct: 171 YTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRR 230
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
+ KNV+SWT ++ +G NG + ++ F M +EP++FTL S +S C + SL+ G
Sbjct: 231 IRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIG 290
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK- 353
TQ H ++ G S + + N+++ Y KCG I ++ +LF+EM V+W A+++G+A+
Sbjct: 291 TQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARM 350
Query: 354 --FGK--------ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
F K E + +F K+ G+KPD T VLS CS +E+G +
Sbjct: 351 MDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTI 410
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
K + + T ++++ ++ G +E A +M I W ++++
Sbjct: 411 KTGFLSDVVVG-TALVNMYNKCGSIERASKAFVEMSIRT-LISWTSMIT 457
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 148/283 (52%), Gaps = 5/283 (1%)
Query: 156 REAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSAL 215
REA+ RE G ++ + +L C + + ++IHA I++ + F+ + L
Sbjct: 55 REALSFIRE----GTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFL 110
Query: 216 VDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDD 275
V++Y KC +++ A VF + +NVVSWT ++ GY + E AV++F M G P +
Sbjct: 111 VNVYAKCGTMETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTN 170
Query: 276 FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNE 335
+TLG+ +S+ ++L S E G Q HG S+ + ++ N+L + Y KCG++E + + F
Sbjct: 171 YTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRR 230
Query: 336 MNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG 395
+ ++ +SWT ++S + G+A + F +MLS ++P+E TL LS C ++ G
Sbjct: 231 IRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIG 290
Query: 396 RHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
+ +K G ++ + + G + EAK ++M
Sbjct: 291 TQIHSLTIK-LGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEM 332
>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 690
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/569 (39%), Positives = 343/569 (60%), Gaps = 5/569 (0%)
Query: 83 LVDMYAKLGLIYDAKRGFDELP----EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKD 138
LV L I KR F+ + E ++ + N ++ ++ GL+ ++R+LF M +KD
Sbjct: 123 LVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMNRVLFVHVKCGLMLDARKLFDEMPEKD 182
Query: 139 SISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHA 198
SW TMI G + +G EA LF M E TF +++ A GL ++ G+QIH+
Sbjct: 183 MASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAGLGLVQVGRQIHS 242
Query: 199 FIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEE 258
++ D+ FV AL+DMY KC SI+ A VF M K V W +++ Y +G SEE
Sbjct: 243 CALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEE 302
Query: 259 AVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVT 318
A+ + M+ +G + D FT+ VI CA LASLE Q H + G + I + ALV
Sbjct: 303 ALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVANTALVD 362
Query: 319 FYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVT 378
FY K G +ED+ +FN M ++ +SW AL++GY G+ E +++FE+ML G+ P+ VT
Sbjct: 363 FYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVT 422
Query: 379 LIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
+ VLSACS +GL E+G F M +++ ++P HY CM+++L R G L+EA I
Sbjct: 423 FLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMVELLGREGLLDEAYELIRSA 482
Query: 439 PFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVS 498
PF P WATLL++CR+H N+E+GK AAE+L ++P +Y++L ++Y S GK +
Sbjct: 483 PFKPTTNMWATLLTACRMHENLELGKLAAENLYGMEPEKLCNYIVLLNLYNSSGKLKEAA 542
Query: 499 QLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVP 558
+ +T++ KG+R P C+WI+ K + + F D S + +IY ++ + ++ + GYV
Sbjct: 543 GVLQTLKRKGLRMLPACTWIEVKKQSYAFLCGDKSHSQTKEIYEKVNNMMVEISRHGYVE 602
Query: 559 DMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYIS 618
+ ++L DV+ E+ ++L +HSEKLAIAFGL+ P P+++ + RVC DCH+A K+I+
Sbjct: 603 ENKALLPDVDEEEQ-RILKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHSAIKFIA 661
Query: 619 KITQREILVRDAVRFHLFKNGECSCGDFW 647
+T REI+VRDA RFH F++G CSCGD+W
Sbjct: 662 MVTGREIVVRDASRFHHFRDGSCSCGDYW 690
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 132/467 (28%), Positives = 212/467 (45%), Gaps = 68/467 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SW +I G G+ ++A ++ M ++ SR TF+TM+ S+ V +
Sbjct: 178 MPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSR-TFTTMIRASAGLGLVQV 236
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQIH LK G G FV L+DMY+K G I DA FD++PEK V +N++I
Sbjct: 237 GRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYAL 296
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G E EA+ + EMR G +D FT V
Sbjct: 297 HGYSE-------------------------------EALSFYYEMRDSGAKIDHFTISIV 325
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ C L +LE KQ HA ++R + ++ +ALVD Y K ++ A VF M KNV
Sbjct: 326 IRICARLASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNV 385
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
+SW A++ GYG +G EEAV++F M R G+ P+ T +V+S+C+ E G + F+
Sbjct: 386 ISWNALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFYS 445
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKAN 358
S + +V G+ G +++++ L + + W L++ + +
Sbjct: 446 MSRDHKVKPRAMHYACMVELLGREGLLDEAYELIRSAPFKPTTNMWATLLTA----CRMH 501
Query: 359 ETIDLFEKMLS--HGLKPDEVT-----------------LIGVLSACSRAGL-------- 391
E ++L + +G++P+++ GVL R GL
Sbjct: 502 ENLELGKLAAENLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGVLQTLKRKGLRMLPACTW 561
Query: 392 --VEKGRHYFEIMVKEYG-IRPIHDHYTCMIDILSRAGRLEEAKSFI 435
V+K + F K + + I++ M+ +SR G +EE K+ +
Sbjct: 562 IEVKKQSYAFLCGDKSHSQTKEIYEKVNNMMVEISRHGYVEENKALL 608
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 160/309 (51%), Gaps = 6/309 (1%)
Query: 156 REAIDLFREMRLE--GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGS 213
REA++LF + LE G + T+ ++++AC GL ++ K++ +++ + + +++V +
Sbjct: 97 REAMELFEILELEHDGFDVGGSTYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMN 156
Query: 214 ALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEP 273
++ ++ KC + A +F M K++ SW M+ G+ +G EA +F M +
Sbjct: 157 RVLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDG 216
Query: 274 DDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLF 333
T ++I + A L ++ G Q H +L G+ VS AL+ Y KCG+IED+H +F
Sbjct: 217 RSRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVF 276
Query: 334 NEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVE 393
++M + V W ++++ YA G + E + + +M G K D T+ V+ C+R +E
Sbjct: 277 DQMPEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLE 336
Query: 394 KGRHYFEIMVKE-YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ +V+ Y + + T ++D S+ GR+E+A N+M + I W L++
Sbjct: 337 YAKQAHAALVRRGYDTDIVAN--TALVDFYSKWGRMEDAWHVFNRMR-RKNVISWNALIA 393
Query: 453 SCRIHGNVE 461
HG E
Sbjct: 394 GYGNHGQGE 402
>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Vitis vinifera]
Length = 704
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/625 (36%), Positives = 369/625 (59%), Gaps = 32/625 (5%)
Query: 23 NDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSP 82
++A++++ ++ +G ++ T+ ++ + + +++ +++ G ++ +
Sbjct: 112 HEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNR 171
Query: 83 LVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISW 142
++ M+ K G++ DA+R FDE+PEKNI+ +NT+I GL+ G E+ RLF M S +
Sbjct: 172 VLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAG 231
Query: 143 TTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIR 202
+ M F +++ A GL + G+Q+H+ ++
Sbjct: 232 SRM-------------------------------FVTMIRASAGLGLIFAGRQLHSCSLK 260
Query: 203 NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKI 262
+VFV AL+DMY KC SI+ A+ VF M K V W +++ GY +G SEEA+ +
Sbjct: 261 TGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSM 320
Query: 263 FCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGK 322
+ M+ +G++ D+FT +I CA LASLE Q H + G I + ALV Y K
Sbjct: 321 YYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSK 380
Query: 323 CGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGV 382
G IED+ +F+ M ++ +SW AL++GY G+ E +++FE+ML G+ P+ VT + V
Sbjct: 381 WGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAV 440
Query: 383 LSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPP 442
LSACS +GL ++G FE M +++ I+P HY CMI++L R G L+EA + I PF P
Sbjct: 441 LSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKP 500
Query: 443 DAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRR 502
WA LL++CR+H N E+GK+AAE L + P ++YV+L +IY G+ + + + +
Sbjct: 501 TVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNRSGRLEEAAAVIQ 560
Query: 503 TMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSS 562
T++ +G+R P CSWI+ K + + F + D S +IY +L++L ++ K GYVP
Sbjct: 561 TLKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELMLEISKHGYVPQDKF 620
Query: 563 VLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQ 622
+L DV+ E+ ++L +HSEKLAIAFGL+ P+++V++ R+C DCH+A K I+ +T+
Sbjct: 621 LLPDVDEQEE-RVLLYHSEKLAIAFGLINTSDWTPLQIVQSHRICGDCHSAIKLIALVTR 679
Query: 623 REILVRDAVRFHLFKNGECSCGDFW 647
REI+VRDA RFH FK+G CSCGD+W
Sbjct: 680 REIVVRDASRFHHFKDGSCSCGDYW 704
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/441 (29%), Positives = 204/441 (46%), Gaps = 73/441 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +SWN +I G G +A +++ +M +D SR+ F TM+ S+ +
Sbjct: 192 MPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRM-FVTMIRASAGLGLIFA 250
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H LK G G VFV L+DMY+K G I DA+ FD++PEK V +N++I G
Sbjct: 251 GRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYAL 310
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G E EA+ ++ EMR G+ +D FTF +
Sbjct: 311 HGYSE-------------------------------EALSMYYEMRDSGVKIDNFTFSII 339
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ C L +LE KQ HA ++R+ ++ +ALVD+Y K I+ A+ VF M KNV
Sbjct: 340 IRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNV 399
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
+SW A++ GYG +G EAV++F M G+ P+ T +V+S+C+ + G + F
Sbjct: 400 ISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFES 459
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKAN 358
S + ++ G+ G ++++ L + + V+ W AL
Sbjct: 460 MSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAAL----------- 508
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH-DHYTC 417
L+AC E G+ E K YG+ P +Y
Sbjct: 509 ------------------------LTACRVHKNFELGKFAAE---KLYGMGPEKLSNYVV 541
Query: 418 MIDILSRAGRLEEAKSFINKM 438
+++I +R+GRLEEA + I +
Sbjct: 542 LLNIYNRSGRLEEAAAVIQTL 562
>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/603 (36%), Positives = 347/603 (57%), Gaps = 32/603 (5%)
Query: 46 STMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPE 105
S ++ S+ + R +H ++K ++ F+G LV Y +LG DA FDELP
Sbjct: 42 SALITAISTCSSISYCRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDELP- 100
Query: 106 KNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM 165
DKD +SW ++I+G + + L M
Sbjct: 101 ------------------------------DKDLVSWNSLISGFSRRADLGICLGLLFRM 130
Query: 166 RLE-GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
R E GL ++ T V++AC G+ L+ GK IH +++ V V ++L+++Y KC
Sbjct: 131 RFEMGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGC 190
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
++ A +F M+ +++VSW +M+ + G +E+ + F M+R GI D T+ S++ +
Sbjct: 191 LEAACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLA 250
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
C NL + HG L GL + ++ AL+ Y K G + DS ++F M D V+W
Sbjct: 251 CENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAW 310
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
TA++S YA G+ E I+ FE M+ G+ PD VT +LSACS +GLVE+G++YF+IM +
Sbjct: 311 TAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEGKNYFKIMYE 370
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
YG+ +HY+CM+D+L R+G L +A I MP P++ W L+ +CR+ GN+E+GK
Sbjct: 371 FYGVELRVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALIGACRVRGNIELGK 430
Query: 465 WAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRV 524
AE L LDP + +Y+ LS++Y++ G+W S++R M+E+ + ++PGCS+I++ +++
Sbjct: 431 EVAERLFSLDPSDSRNYITLSNMYSAAGQWRDASKVRALMKERVLIRNPGCSYIEHGNKI 490
Query: 525 HIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLA 584
H F D S P ++QIY +LE+L RK + G+ VLHDV+ K ++N HSEKLA
Sbjct: 491 HCFVMGDQSHPDTEQIYNKLEELVRKNREVGFASKTEYVLHDVDEEVKEDLINKHSEKLA 550
Query: 585 IAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCG 644
IAFGLL G+P+ + KN+R+C DCH K IS I +R I++RD RFH F NG CSCG
Sbjct: 551 IAFGLLVTNAGMPLIITKNIRICGDCHGFAKLISLIEKRTIIIRDTKRFHHFTNGLCSCG 610
Query: 645 DFW 647
D+W
Sbjct: 611 DYW 613
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 179/398 (44%), Gaps = 53/398 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKV-YNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
+P D VSWN LISG + + + + + + + GL + +T ++ + +D
Sbjct: 99 LPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGL-KPNEVTVIPVVSACAGVGELD 157
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+G+ IHG +K G V V + L+++Y K G +
Sbjct: 158 VGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCL-------------------------- 191
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
E + LF GM + +SW +M+ + GL + I F MR G+ DQ T S
Sbjct: 192 -----EAACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVS 246
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L AC L + + +H +I+ N+ + +AL+D+Y K ++ + VF M +
Sbjct: 247 LLLACENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPD 306
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT---- 295
V+WTAML Y +G EA++ F M R G+ PD T ++S+C++ +EEG
Sbjct: 307 AVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEGKNYFK 366
Query: 296 ---QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGY 351
+F+G L + + +V G+ G++ D+++L M + W AL+
Sbjct: 367 IMYEFYGVEL------RVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALIGAC 420
Query: 352 AKFGKANETIDLFEKMLSHGLKPDE----VTLIGVLSA 385
G ++ E++ S L P + +TL + SA
Sbjct: 421 RVRGNIELGKEVAERLFS--LDPSDSRNYITLSNMYSA 456
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 91/179 (50%), Gaps = 3/179 (1%)
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN 334
D + ++I++ + +S+ H R + + + + + LV+ Y + G +D+ LF+
Sbjct: 38 DSLVSALITAISTCSSISYCRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFD 97
Query: 335 EMNVRDEVSWTALVSGYAKFGKANETIDLFEKM-LSHGLKPDEVTLIGVLSACSRAGLVE 393
E+ +D VSW +L+SG+++ + L +M GLKP+EVT+I V+SAC+ G ++
Sbjct: 98 ELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELD 157
Query: 394 KGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
G+ I VK + + +I++ + G LE A M + W ++++
Sbjct: 158 VGKCIHGIAVKSGMLLEV-KVVNSLINLYGKCGCLEAACCLFEGMSV-QSLVSWNSMVA 214
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/608 (37%), Positives = 349/608 (57%), Gaps = 40/608 (6%)
Query: 41 SRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF 100
S+ +FS +L + LG H I+K GF + + + L+D YAK+G + AKR F
Sbjct: 9 SKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRVF 68
Query: 101 DELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAID 160
+P +++V N MI+ L + G VEE+R LF M +++S SW +MIT + G A
Sbjct: 69 MGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCKLGDINSARL 128
Query: 161 LFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYC 220
+F C N KD V +A++D YC
Sbjct: 129 MFD--------------------C------------------NPVKD-VVSWNAIIDGYC 149
Query: 221 KCKSIKYAESVFRTM-AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLG 279
K K + A+ +F M + +N V+W M+ Y Q G A+ +F MQ ++P + T+
Sbjct: 150 KSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMV 209
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
S++S+CA+L +L+ G HG L + + NAL+ Y KCG +E + +F+ ++ +
Sbjct: 210 SLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRK 269
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
+ W +++ G G+ E I F M G+KPD VT +G+LS CS +GL+ G+ YF
Sbjct: 270 NIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYF 329
Query: 400 EIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
M+ YG+ P +HY CM+D+L RAG L+EA I MP P+++ +LL +C+IH +
Sbjct: 330 SEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKD 389
Query: 460 VEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIK 519
++G+ + LLELDP + +YV LS++YAS +WD V+ R+ M ++GV K PGCS I+
Sbjct: 390 TKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIE 449
Query: 520 YKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHH 579
+ VH F A D S P QI A L+++ +++ +G+VP+ ++VLHD+E EK + +H
Sbjct: 450 VNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYH 509
Query: 580 SEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNG 639
SE++A+AFGL+ PPG IRVVKNLR CSDCH+A K IS +REI+VRD RFH F+NG
Sbjct: 510 SERIAVAFGLMSTPPGKTIRVVKNLRTCSDCHSAMKLISNAFKREIIVRDRKRFHHFRNG 569
Query: 640 ECSCGDFW 647
CSC D+W
Sbjct: 570 SCSCNDYW 577
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 13/190 (6%)
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M RN + P + ++ SCA + G FH + + G + + L+ FY K G+
Sbjct: 1 MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
++ + R+F M RD V+ A++S +K G E +LF+ M + + +++
Sbjct: 61 LKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTER----NSCSWNSMITC 116
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHD--HYTCMIDILSRAGRLEEAKSFINKMPFPPD 443
+ G + R F+ P+ D + +ID ++ +L A+ M +
Sbjct: 117 YCKLGDINSARLMFD-------CNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARN 169
Query: 444 AIGWATLLSS 453
++ W T++S+
Sbjct: 170 SVTWNTMISA 179
>gi|218192399|gb|EEC74826.1| hypothetical protein OsI_10663 [Oryza sativa Indica Group]
Length = 703
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/544 (41%), Positives = 327/544 (60%), Gaps = 8/544 (1%)
Query: 95 DAKRGFDELPEKNIVMYNTMITGLLRRGL-VEESRRLFRGMKDKDSISWTTMITGLMQNG 153
DA F + +I +NT+I+ L R + +R LF M +D +W+ +++G ++G
Sbjct: 81 DALALFSSIAAPDICSHNTLISALSRSPRHLPSARELFDRMPQRDHFAWSALVSGYARHG 140
Query: 154 LEREAIDLFREMRLE---GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIR---NDHKD 207
A+ L+R M+ E A ++FT S L A G+++H ++R +
Sbjct: 141 QPEAALALYRRMQEEPGNDGADNEFTASSALAAAAAARCGRAGRELHCHVVRRGIDAAGG 200
Query: 208 NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQ 267
+ + SAL DMY KC + A VF M ++ VSWTAM+ Y G E ++F +M
Sbjct: 201 DAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHML 260
Query: 268 RN-GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
R G+ P++FT V+ +CA A G Q HGR +G +AL+ Y KCG++
Sbjct: 261 RTRGVRPNEFTYAGVLRACAEFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGDM 320
Query: 327 EDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSAC 386
+ R+F M D VSWTA++SGYA+ G+ E + F+ L G+KPD VT +GVLSAC
Sbjct: 321 GSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSAC 380
Query: 387 SRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIG 446
+ AGLV+KG F + ++Y I DHY C+ID+LSR+G+ E A+ I M P+
Sbjct: 381 AHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKFL 440
Query: 447 WATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMRE 506
WA+LL CRIH NV + + AAE+L E++P NPA+YV L++IYAS G +D V +RR M
Sbjct: 441 WASLLGGCRIHKNVGLARRAAEALFEIEPENPATYVTLANIYASVGLFDEVEDVRRIMES 500
Query: 507 KGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHD 566
KG+ K P SWI+ RVH+F D S P +D+IYA L+KL KM++EGYV D+ VLHD
Sbjct: 501 KGITKMPASSWIEVGRRVHVFLVGDKSHPKADEIYALLKKLYVKMVEEGYVADIEFVLHD 560
Query: 567 VELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREIL 626
VE +K + + +HSE+LA+AFG++ P G PI+V KNLR+C DCH A K IS+I QR+I+
Sbjct: 561 VEDEQKEQDIGYHSERLAVAFGIIASPEGSPIKVFKNLRICGDCHAAIKLISQIVQRDII 620
Query: 627 VRDA 630
VRD+
Sbjct: 621 VRDS 624
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 194/677 (28%), Positives = 309/677 (45%), Gaps = 124/677 (18%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLK----DGLGNLSRITFSTMLIMSSSRR 56
MP D +W+ L+SG+A HG A+ +Y M + DG N T S+ L +++ R
Sbjct: 121 MPQRDHFAWSALVSGYARHGQPEAALALYRRMQEEPGNDGADN--EFTASSALAAAAAAR 178
Query: 57 CVDLGRQIHGHILKFGF---GSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNT 113
C GR++H H+++ G G + S L DMYAK G + DA
Sbjct: 179 CGRAGRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDA----------------- 221
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAM 172
RR+F M +D++SWT M+ G E LF M R G+
Sbjct: 222 --------------RRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRP 267
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
++FT+ VL AC G+Q+H + ++ D+ F SAL+ MY KC + A VF
Sbjct: 268 NEFTYAGVLRACAEFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVF 327
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
MA ++VSWTA++ GY QNG EEA++ F R+GI+PD T V+S+CA+ ++
Sbjct: 328 EAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVD 387
Query: 293 EGTQ-FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
+G + FH + ++ + G E + ++ M V+ ++ W +L+ G
Sbjct: 388 KGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGG 447
Query: 351 ---YAKFGKANETID-LFEKMLSHGLKPDE-VTLIGVLSACSRAGLVEKGRHYFEIMVKE 405
+ G A + LFE ++P+ T + + + + GL
Sbjct: 448 CRIHKNVGLARRAAEALFE------IEPENPATYVTLANIYASVGL-------------- 487
Query: 406 YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKW 465
D + R+ E+K I KMP A W +E+G+
Sbjct: 488 -------------FDEVEDVRRIMESKG-ITKMP----ASSW------------IEVGR- 516
Query: 466 AAESLLELDPYNPAS---YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKS 522
L D +P + Y LL +Y + +V+ + + + V + I Y S
Sbjct: 517 RVHVFLVGDKSHPKADEIYALLKKLYVKMVEEGYVADIEFVLHD--VEDEQKEQDIGYHS 574
Query: 523 RVHIFSADDWSSPYSDQI------------YAELEKLNRKMIKEGYVPDMSSVLHDVELS 570
+ +SP I +A ++ +++ + ++ V D +S+
Sbjct: 575 ERLAVAFGIIASPEGSPIKVFKNLRICGDCHAAIKLISQIVQRDIIVRDSNSL------- 627
Query: 571 EKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDA 630
K + + +HSE+LA+AFG++ P G PI+V KNLR+C DCH A K IS+I QR+I+VRD+
Sbjct: 628 -KEQDIGYHSERLAVAFGIIASPEGSPIKVFKNLRICGDCHTAIKLISQIVQRDIIVRDS 686
Query: 631 VRFHLFKNGECSCGDFW 647
RFH FK+G CSC D+W
Sbjct: 687 NRFHHFKDGICSCRDYW 703
>gi|302818616|ref|XP_002990981.1| hypothetical protein SELMODRAFT_132724 [Selaginella moellendorffii]
gi|300141312|gb|EFJ08025.1| hypothetical protein SELMODRAFT_132724 [Selaginella moellendorffii]
Length = 578
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/545 (39%), Positives = 340/545 (62%), Gaps = 2/545 (0%)
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
E ++++ ++ + G ++ +R LF + +D+ W MI+ L+ + EA++L R+
Sbjct: 34 ELDVIVATAVMNAYGKCGDLDSARGLFDRILVRDAAVWNAMISLLVVHEQGDEALELCRQ 93
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVD-MYCKCK 223
MRL+G+ + T + L AC EG +IHAF + V +ALV+ MY +
Sbjct: 94 MRLDGVTPSKGTCVAALNACCHSRDFSEGLRIHAFARELGGDADTVVQTALVNIMYARLG 153
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
S++ A +F M +NV+SWTAM+ + Q G + EA++IF ++ G+ P+D T +V++
Sbjct: 154 SLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVTPNDVTFTAVLN 213
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+ NLAS+ TG + + V+N L+ GKCG++E+ + F M V+++VS
Sbjct: 214 ASGNLASIRAAKLVQACLSETGFLGNVEVANGLLCALGKCGSLEEVAKFFRVMPVQNQVS 273
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
W + ++ A+ G ++LF+ M G+ VTLIGVLS+CS AGLV +G YF M
Sbjct: 274 WNSAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMH 333
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI-GWATLLSSCRIHGNVEI 462
+YG+ +HY+C+ID+LSRAG LE A+ F+ ++PF +++ W TLL C++HG++E
Sbjct: 334 VDYGLPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDESVFPWITLLCGCKLHGDLER 393
Query: 463 GKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKS 522
G A + +L L+P + Y+++ ++YA GKW + +R++M + G +K+PG SWI+ K
Sbjct: 394 GGRATQRILGLNPGSTGPYLVMHNLYAGAGKWPEAAAVRKSMVDLGPKKEPGLSWIEVKG 453
Query: 523 RVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEK 582
R+H F D S P S +I+ ELE+LN KM + G+V D +V++D++ EK +L HSEK
Sbjct: 454 RIHEFRVGDTSHPRSSEIHRELERLNDKMKRAGFVCDTKAVVYDLQAKEKESLLCQHSEK 513
Query: 583 LAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECS 642
LAIAFGL+ G P+R++KNLRVCSDCH+ATK+IS + REI+VRDA RFH F+ G CS
Sbjct: 514 LAIAFGLISTAAGEPLRIMKNLRVCSDCHSATKFISGLVGREIVVRDAYRFHHFRGGACS 573
Query: 643 CGDFW 647
C DFW
Sbjct: 574 CEDFW 578
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 158/374 (42%), Gaps = 38/374 (10%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D WN +IS H ++A+++ M DG+ S+ T L R G +I
Sbjct: 67 DAAVWNAMISLLVVHEQGDEALELCRQMRLDGV-TPSKGTCVAALNACCHSRDFSEGLRI 125
Query: 65 HGHILKFGFGSYVFVGSPLVD-MYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
H + G + V + LV+ MYA+LG + DA+ FD + +N++ + M+ + GL
Sbjct: 126 HAFARELGGDADTVVQTALVNIMYARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQLGL 185
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
REA+ +FR + LEG+ + TF +VL A
Sbjct: 186 -------------------------------NREALRIFRSILLEGVTPNDVTFTAVLNA 214
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
G L ++ K + A + NV V + L+ KC S++ FR M +N VSW
Sbjct: 215 SGNLASIRAAKLVQACLSETGFLGNVEVANGLLCALGKCGSLEEVAKFFRVMPVQNQVSW 274
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQFHGRSL 302
+ + Q+G V++F MQ GI+ TL V+SSC++ + +G + F +
Sbjct: 275 NSAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMHV 334
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE--VSWTALVSGYAKFGKANET 360
GL + + ++ + G +E + + DE W L+ G G
Sbjct: 335 DYGLPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDESVFPWITLLCGCKLHGDLERG 394
Query: 361 IDLFEKMLSHGLKP 374
+++L GL P
Sbjct: 395 GRATQRIL--GLNP 406
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 238/652 (36%), Positives = 368/652 (56%), Gaps = 41/652 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D SWN +I+ A G +A+ ++ M K L +R +F + SS + G+Q
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYP-TRSSFPCAIKACSSLFDIFSGKQT 98
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H FG+ S +FV S L IVMY+T G +
Sbjct: 99 HQQAFVFGYQSDIFVSSAL------------------------IVMYSTC-------GKL 127
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE------GLAMDQFTFG 178
E++R++F + ++ +SWT+MI G NG +A+ LF+++ ++ + +D
Sbjct: 128 EDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLV 187
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS--IKYAESVFRTMA 236
SV++AC + A + IH+F+I+ V VG+ L+D Y K + A +F +
Sbjct: 188 SVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIV 247
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEP-DDFTLGSVISSCANLASLEEGT 295
K+ VS+ +++ Y Q+G S EA ++F + +N + + TL +V+ + ++ +L G
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGK 307
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
H + + GL + V +++ Y KCG +E + + F+ M ++ SWTA+++GY G
Sbjct: 308 CIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHG 367
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
A + ++LF M+ G++P+ +T + VL+ACS AGL +G +F M +G+ P +HY
Sbjct: 368 HAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHY 427
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
CM+D+L RAG L++A I +M PD+I W++LL++CRIH NVE+ + + L ELD
Sbjct: 428 GCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDS 487
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSP 535
N Y+LLS IYA G+W V ++R M+ +G+ K PG S ++ VH+F D P
Sbjct: 488 SNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHP 547
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
++IY L +LNRK+++ GYV + SSV HDV+ EK L HSEKLAIAFG++ PG
Sbjct: 548 QREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPG 607
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ VVKNLRVCSDCHN K ISKI RE +VRDA RFH FK+G CSCGD+W
Sbjct: 608 STVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 181/360 (50%), Gaps = 41/360 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCV-- 58
+P + VSW +I G+ +G+ DAV ++ +L D + + +M ++S C
Sbjct: 137 IPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRV 196
Query: 59 ---DLGRQIHGHILKFGFGSYVFVGSPLVDMYAK--LGLIYDAKRGFDELPEKNIVMYNT 113
L IH ++K GF V VG+ L+D YAK G + A++ FD++ +K+ V YN
Sbjct: 197 PAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYN- 255
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAM 172
++++ Q+G+ EA ++FR + + + +
Sbjct: 256 ------------------------------SIMSVYAQSGMSNEAFEVFRRLVKNKVVTF 285
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
+ T +VL A AL GK IH +IR +D+V VG++++DMYCKC ++ A F
Sbjct: 286 NAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAF 345
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
M KNV SWTAM+ GYG +G + +A+++F M +G+ P+ T SV+++C++
Sbjct: 346 DRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHV 405
Query: 293 EGTQ-FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
EG + F+ G+ + +V G+ G ++ ++ L M ++ D + W++L++
Sbjct: 406 EGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 240/649 (36%), Positives = 364/649 (56%), Gaps = 45/649 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVK-VYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
MP D V+WN +++G+A HG + AV + ++ ++ + T +L + + + +
Sbjct: 71 MPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALA 130
Query: 60 LGRQIHGHIL----------KFGFGSYVFVGSPLVDMYAKLG-LIYDAKRGFDELPEKNI 108
G +H + + K V +G+ L+DMYAK G L+Y
Sbjct: 131 QGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLY-------------- 176
Query: 109 VMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE 168
+RR+F M ++ ++W+ +I G + +A LF+ M +
Sbjct: 177 ------------------ARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQ 218
Query: 169 GLA-MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY 227
GL + + S L AC L L G+Q+HA + ++ ++ G++L+ MY K I
Sbjct: 219 GLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQ 278
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN 287
A ++F MA K+ VS++A++ GY QNG +EEA +F MQ +EPD T+ S+I +C++
Sbjct: 279 AIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSH 338
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
LA+L+ G HG ++ GL S ++ NAL+ Y KCG I+ S ++FN M RD VSW +
Sbjct: 339 LAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTM 398
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYG 407
++GY G E LF +M + G PD VT I +LSACS +GLV +G+H+F +M YG
Sbjct: 399 IAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYG 458
Query: 408 IRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAA 467
+ P +HY CM+D+LSR G L+EA FI MP D W LL +CR++ N+++GK +
Sbjct: 459 LTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVS 518
Query: 468 ESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF 527
+ EL P ++VLLS+IY++ G++D +++R + +G +K PGCSWI+ +H F
Sbjct: 519 RMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAF 578
Query: 528 SADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAF 587
D S P S +IY EL+ + + K GY PD S VL D+E EK K L HSEKLAIA+
Sbjct: 579 VGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAY 638
Query: 588 GLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLF 636
G+L + I V KNLRVC DCH K+IS + +R I+VRDA RFH F
Sbjct: 639 GILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHF 687
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 130/461 (28%), Positives = 224/461 (48%), Gaps = 61/461 (13%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR IH H + G + +FV + L+DMY K + DA F +P +++V +N M+ G
Sbjct: 29 GRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAH 88
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G+ + M +M++ L + T ++
Sbjct: 89 HGMYHHAVAHLLSM-----------------------------QMQMHRLRPNASTLVAL 119
Query: 181 LTACGGLLALEEGKQIHAFIIR----------NDHKDNVFVGSALVDMYCKCKSIKYAES 230
L AL +G +HA+ IR + D V +G+AL+DMY KC S+ YA
Sbjct: 120 LPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 179
Query: 231 VFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG---IEPDDFTLGSVISSCAN 287
VF M +N V+W+A++ G+ +A +F M G + P ++ S + +CA+
Sbjct: 180 VFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACAS 237
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
L L G Q H +G+ + +T N+L++ Y K G I+ + LF+EM V+D VS++AL
Sbjct: 238 LDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSAL 297
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR-HYFEIMVKEY 406
VSGY + G+A E +F+KM + ++PD T++ ++ ACS ++ GR + ++++
Sbjct: 298 VSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR-- 355
Query: 407 GIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWA 466
G+ +ID+ ++ GR++ ++ N MP D + W T+++ IHG +GK A
Sbjct: 356 GLASETSICNALIDMYAKCGRIDLSRQVFNMMP-SRDIVSWNTMIAGYGIHG---LGKEA 411
Query: 467 AESLLELD----PYNPASYVLLSSIYASKG------KWDHV 497
LE++ P + +++ L S + G W HV
Sbjct: 412 TALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHV 452
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 150/305 (49%), Gaps = 15/305 (4%)
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
+A + +TF L AC L G+ IH I + ++FV +AL+DMY KC + A
Sbjct: 6 VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVK--IFCNMQRNGIEPDDFTLGSVISSCAN 287
+F TM +++V+W AML GY +G AV + MQ + + P+ TL +++ A
Sbjct: 66 HIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQ 125
Query: 288 LASLEEGTQFHG----------RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN 337
+L +GT H R+ + L + + AL+ Y KCG++ + R+F+ M
Sbjct: 126 QGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMP 185
Query: 338 VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLK-PDEVTLIGVLSACSRAGLVEKGR 396
R+EV+W+AL+ G+ + + LF+ ML+ GL ++ L AC+ + G
Sbjct: 186 ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGE 245
Query: 397 HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRI 456
++ K G+ ++ + ++AG +++A + ++M D + ++ L+S
Sbjct: 246 QLHALLAKS-GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV-KDTVSYSALVSGYVQ 303
Query: 457 HGNVE 461
+G E
Sbjct: 304 NGRAE 308
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 36/271 (13%)
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M R+ + P+++T + +C+ LA G H ++ GL + + VS AL+ Y KC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID--LFEKMLSHGLKPDEVTLIGVL 383
+ D+ +F M RD V+W A+++GYA G + + L +M H L+P+ TL+ +L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 384 SACSRAGLVEKGRHYFEIMVKEYGIRP-IHDHY-------------TCMIDILSRAGRLE 429
++ G + +G V Y IR +H + T ++D+ ++ G L
Sbjct: 121 PLLAQQGALAQG-----TSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLL 175
Query: 430 EAKSFINKMPFPPDAIGWATL-----LSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
A+ + MP + + W+ L L S + A+ L L P + +
Sbjct: 176 YARRVFDAMP-ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTS------I 228
Query: 485 SSIYASKGKWDHV---SQLRRTMREKGVRKD 512
+S + DH+ QL + + GV D
Sbjct: 229 ASALRACASLDHLRMGEQLHALLAKSGVHAD 259
>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
Length = 749
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 243/648 (37%), Positives = 358/648 (55%), Gaps = 67/648 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P V+WN +I+ + +G +A+ +Y M+ DG+ TFS++ S V
Sbjct: 137 VPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILP-DEFTFSSVFKAFSDLGLVHE 195
Query: 61 GRQIHGHILKFGFG-SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G++ HG + G G S VFVGS LVDMYAK G + DA+ D++ K++V++
Sbjct: 196 GQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLF-------- 247
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
T +I G +G + E++ +FR M +G+ +++T S
Sbjct: 248 -----------------------TALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSS 284
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL CG L L G+ IH I++ ++
Sbjct: 285 VLVCCGNLEDLTSGRLIHGLIVK--------------------------------AGLES 312
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
V+WT+++VG QNG E A+ F M R+ I P+ FTL SV+ +C++LA LE+G Q H
Sbjct: 313 AVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHA 372
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ GL V AL+ FYGKCG+ E + +FN + D VS +++ YA+ G +E
Sbjct: 373 IVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHE 432
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ LF M GL+P+ VT +GVLSAC+ AGL+E+G H F I DHY CM+
Sbjct: 433 ALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMV 492
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L RAGRL+EA+ IN++ D + W TLLS+CRIHG+VE+ K +++L P +
Sbjct: 493 DLLGRAGRLKEAEMLINQVNI-SDVVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGG 551
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
++VLLS++YAS G W V +++ MRE ++K+P SW+ + +H F A DWS P
Sbjct: 552 THVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRD 611
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIP-PGLPI 598
I +LE+L K+ + GYVPD VL D++ +KI+ L +HSEKLA+AF L I
Sbjct: 612 IREKLEELIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTI 671
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDF 646
R++KNLRVC DCH K++SKI R+I+ RD RFH F+NG CSCGD+
Sbjct: 672 RILKNLRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDY 719
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 173/345 (50%), Gaps = 44/345 (12%)
Query: 97 KRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLER 156
KRGF + N +I L+ G V +R++F + + ++W +MI ++NG +
Sbjct: 106 KRGFHH------SLGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSK 159
Query: 157 EAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHA-FIIRNDHKDNVFVGSAL 215
EAID+++ M +G+ D+FTF SV A L + EG++ H ++ NVFVGSAL
Sbjct: 160 EAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSAL 219
Query: 216 VDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDD 275
VDMY K ++ A V + K+VV +TA++VGY +G E++++F NM + GIE ++
Sbjct: 220 VDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANE 279
Query: 276 FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNE 335
+TL SV+ C NL L G HG + GL S +T
Sbjct: 280 YTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVT------------------------ 315
Query: 336 MNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG 395
WT+++ G + G+ + F +ML + P+ TL VL ACS ++E+G
Sbjct: 316 --------WTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQG 367
Query: 396 RHYFEIMVKEYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKM 438
+ I++K +G+ D Y +ID + G E A+S N +
Sbjct: 368 KQIHAIVMK-FGLDI--DKYVGAALIDFYGKCGSTEIARSVFNGL 409
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 243/658 (36%), Positives = 379/658 (57%), Gaps = 51/658 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +SWN +IS +G+ +AV Y+LM + S I+ S ++SS C L
Sbjct: 441 MEATDRISWNTIISALDQNGNCEEAVMHYSLMRQ------SCISPSNFALISSLSSCAGL 494
Query: 61 -----GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
G+Q+H +K+G V + LV MY + G + D
Sbjct: 495 KLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSD-------------------- 534
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLE--REAIDLFREMRLEGLAMD 173
++F M + D +SW TM+ G+M + E + +F M GL +
Sbjct: 535 -----------YWKVFNSMAEHDEVSWNTMM-GVMASSQTPISEIVKVFNNMMRGGLIPN 582
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
+ TF ++L A L LE GKQ+HA ++++ ++ V +AL+ Y K + E +F
Sbjct: 583 KVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFT 642
Query: 234 TMA-WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
M+ ++ +SW +M+ GY NG +EA+ M +G D T ++++CA++A+LE
Sbjct: 643 NMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALE 702
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
G + H + + L S + V +ALV Y KCG ++ + +LFN M R+E SW +++SGYA
Sbjct: 703 RGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYA 762
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
+ G + I++FE+ML PD VT + VLSACS AGLVE+G YFE+M ++GI P
Sbjct: 763 RHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMM-PDHGILPQI 821
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIH---GNVEIGKWAAES 469
+HY+C+ID+L RAG++++ K +I +MP P+A+ W T+L +CR N+++G+ A+
Sbjct: 822 EHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRV 881
Query: 470 LLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSA 529
LLE++P NP +YVL S+ +A+ G W+ ++ R MR+ +K+ G SW+ VH F A
Sbjct: 882 LLEIEPQNPVNYVLASNFHAATGMWEDTAKARTAMRQATEKKEAGRSWVTLNDGVHTFIA 941
Query: 530 DDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGL 589
D S P + +IY +L L + + GYVP L+D+E K ++L++HSEKLAIAF L
Sbjct: 942 GDRSHPNTKEIYEKLNFLIQNIRNAGYVPLTEYALYDLEEENKEELLSYHSEKLAIAFVL 1001
Query: 590 LFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G PIR++KNLRVC DCH A +YIS++ R+I++RD++RFH FK+G+CSCGD+W
Sbjct: 1002 TRSSSG-PIRIMKNLRVCGDCHIAFRYISQMISRQIILRDSIRFHHFKDGKCSCGDYW 1058
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 145/553 (26%), Positives = 248/553 (44%), Gaps = 99/553 (17%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNL--SRITFSTMLIMSSSRRCV 58
MP + VSW L+SG+ HG +A +V+ ML++ + TF T+L R C
Sbjct: 122 MPERNAVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLL-----RACQ 176
Query: 59 DLGR-------QIHGHILKFGFGS------------------------YVFVGSPLVDM- 86
D G Q+HG + K + S VF G+P+ D+
Sbjct: 177 DGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLI 236
Query: 87 --------YAKLG-------LIYDAKRGFDELP--------------------------- 104
YAK G L D +RG +
Sbjct: 237 TWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQ 296
Query: 105 ----------EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGL 154
++ + + +++ R GL +E++ +F +K K++++ +I GL++
Sbjct: 297 VLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDF 356
Query: 155 EREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEG----KQIHAFIIRNDHKD-NV 209
EA+ +F R + ++ T+ +L+A EEG + +H ++R D +
Sbjct: 357 SEEAVKIFVGTR-NTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKI 415
Query: 210 FVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN 269
V + LV+MY KC +I+ A +F+ M + +SW ++ QNG EEAV + M+++
Sbjct: 416 AVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQS 475
Query: 270 GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
I P +F L S +SSCA L L G Q H ++ GL +VSN LV YG+CG + D
Sbjct: 476 CISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDY 535
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGKA-NETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
++FN M DEVSW ++ A +E + +F M+ GL P++VT I +L+A S
Sbjct: 536 WKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSP 595
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
++E G+ ++K +G+ + +I +++G + + M DAI W
Sbjct: 596 LSVLELGKQVHAAVMK-HGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWN 654
Query: 449 TLLSSCRIHGNVE 461
+++S +GN++
Sbjct: 655 SMISGYIYNGNLQ 667
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 135/479 (28%), Positives = 224/479 (46%), Gaps = 51/479 (10%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVY--NLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGR 62
+ V+ N LI G +AVK++ D + + S + S S + +GR
Sbjct: 340 NAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNADTYVVLLSALAEYSISEEGLRIGR 399
Query: 63 QIHGHILKFGFGSY-VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+HGH+L+ G + V + LV+MYAK G I
Sbjct: 400 VVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAI---------------------------- 431
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
E + ++F+ M+ D ISW T+I+ L QNG EA+ + MR ++ F S L
Sbjct: 432 ---ESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSL 488
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
++C GL L G+Q+H ++ + V + LV MY +C ++ VF +MA + V
Sbjct: 489 SSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEV 548
Query: 242 SWTAML--VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
SW M+ + Q S E VK+F NM R G+ P+ T +++++ + L+ LE G Q H
Sbjct: 549 SWNTMMGVMASSQTPIS-EIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHA 607
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM-NVRDEVSWTALVSGYAKFGKAN 358
+ G++ V NAL++ Y K G++ LF M + RD +SW +++SGY G
Sbjct: 608 AVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQ 667
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH---- 414
E +D M+ G D T +L+AC+ +E+G + + +GIR +
Sbjct: 668 EAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERG-----MELHAFGIRSHLESDVVV 722
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL 473
+ ++D+ S+ GR++ A N M + W +++S HG +G+ A E E+
Sbjct: 723 ESALVDMYSKCGRVDYASKLFNSMT-QRNEFSWNSMISGYARHG---LGRKAIEIFEEM 777
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 204/443 (46%), Gaps = 44/443 (9%)
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
+H ++K G +F+ + LV+ YAK + A + FDE+PE+N V + +++G + G
Sbjct: 82 NLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHG 141
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
+ EE+ R+FR M RE++ G FTFG++L
Sbjct: 142 IAEEAFRVFRAM---------------------------LREVQ-AGCRPTSFTFGTLLR 173
Query: 183 AC--GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMY--CKCKSIKYAESVFRTMAWK 238
AC GG L Q+H + + ++ N V +AL+ MY C A+ VF +
Sbjct: 174 ACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIR 233
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG----IEPDDFTLGSVISSCANLASLEEG 294
++++W A++ Y + G +F +MQR + P + T GS+I++ + +
Sbjct: 234 DLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAV 293
Query: 295 -TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK 353
Q L +G S + V +ALV+ + + G +++ +F + ++ V+ L+ G +
Sbjct: 294 LDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVR 353
Query: 354 FGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM---VKEYGIRP 410
+ E + +F + + + T + +LSA + + E+G ++ + G+
Sbjct: 354 QDFSEEAVKIFVGT-RNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTD 412
Query: 411 IHDHYT-CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAES 469
+ + ++++ ++ G +E A M D I W T++S+ +GN E S
Sbjct: 413 LKIAVSNGLVNMYAKCGAIESASKIFQLME-ATDRISWNTIISALDQNGNCEEAV-MHYS 470
Query: 470 LLELDPYNPASYVLLSSIYASKG 492
L+ +P+++ L+SS+ + G
Sbjct: 471 LMRQSCISPSNFALISSLSSCAG 493
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 94/181 (51%), Gaps = 7/181 (3%)
Query: 194 KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQN 253
+ +H +I+ ++F+ + LV+ Y K + A VF M +N VSWT ++ GY +
Sbjct: 81 ENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLH 140
Query: 254 GCSEEAVKIFCNMQRN---GIEPDDFTLGSVISSCANLASLEEG--TQFHGRSLVTGLIS 308
G +EEA ++F M R G P FT G+++ +C + G Q HG T S
Sbjct: 141 GIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYAS 200
Query: 309 FITVSNALVTFYGKC--GNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
TV NAL++ YG C G + R+F+ +RD ++W AL+S YAK G T LF+
Sbjct: 201 NTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKD 260
Query: 367 M 367
M
Sbjct: 261 M 261
>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
Length = 838
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 234/694 (33%), Positives = 374/694 (53%), Gaps = 83/694 (11%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW +ISG + +G ++A+ ++ M K + + FS++L + LG Q+
Sbjct: 177 DSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYV-FSSVLSACTKIELFKLGEQL 235
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG I+K+G S FV + LV +Y++ G + A++
Sbjct: 236 HGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQ-------------------------- 269
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+F M +D IS+ ++I+GL Q G A+ LF +M+L+ + D T S+L+AC
Sbjct: 270 -----IFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSAC 324
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+ A +GKQ+H+++I+ ++ + +L+D+Y KC I+ A F T +NVV W
Sbjct: 325 ASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWN 384
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
MLV YGQ G E+ IF MQ G+ P+ +T S++ +C +L +L+ G Q H + + +
Sbjct: 385 VMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKS 444
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G + V + L+ Y K G ++ + + + D VSWTA+++GY + E + LF
Sbjct: 445 GFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLF 504
Query: 365 EKMLSHGLKPDEVTLIGVLSAC-------------------------------------- 386
++M + G++ D + +SAC
Sbjct: 505 QEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALASNVLIT 564
Query: 387 --SRAGLVEKG-RHYFEI----------MVKEYGIRPIHDHYTCMIDILSRAGRLEEAKS 433
S+ G +E R +FE+ M+ Y + + + + G + +
Sbjct: 565 LYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVT 624
Query: 434 FINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGK 493
F+ +MP PDA+ W TLLS+C +H N+EIG++AA LLEL+P + A+YVLLS++YA GK
Sbjct: 625 FVGEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGK 684
Query: 494 WDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIK 553
WD+ + R+ M+++GV+K+PG SWI+ K+ +H F D P ++QIY ++ LN + +
Sbjct: 685 WDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNERAGE 744
Query: 554 EGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNA 613
GYV D ++L+DVE +K HSEKLA+AFGLL + +PIRV+KNLRVC+DCHN
Sbjct: 745 IGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVCNDCHNW 804
Query: 614 TKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
K++SKI+ R I+VRDA RFH F+ G CSC D+W
Sbjct: 805 IKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 838
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 146/553 (26%), Positives = 253/553 (45%), Gaps = 82/553 (14%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+++H I K GF +GS L+D+Y G + +A + FD++P N+
Sbjct: 29 AKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSF---------- 78
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
W +I+GL+ L + + LF M E + D+ TF SV
Sbjct: 79 ---------------------WNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASV 117
Query: 181 LTAC-GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
L AC GG + +QIHA II + + V + L+D+Y K + A+ VF + K+
Sbjct: 118 LRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKD 177
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VSW AM+ G QNG +EA+ +FC M ++ + P + SV+S+C + + G Q HG
Sbjct: 178 SVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHG 237
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ GL S V NALVT Y + GN+ + ++F++M+ RD +S+ +L+SG A+ G ++
Sbjct: 238 FIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDR 297
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH-------------------YFE 400
+ LFEKM +KPD VT+ +LSAC+ G KG+ +
Sbjct: 298 ALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLD 357
Query: 401 IMVKEYGIRPIHDHY-----------TCMIDILSRAGRLEEAKSFINKMPFP---PDAIG 446
+ VK + I H+++ M+ + G L E+ +M P+
Sbjct: 358 LYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYT 417
Query: 447 WATLLSSCRIHGNVEIGKWAAESLLELD-PYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
+ ++L +C G +++G+ +++ +N +L +YA G+ D + + +R
Sbjct: 418 YPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLR 477
Query: 506 EKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLH 565
E+ V + + + + ++ D ++AE KL ++M +G D
Sbjct: 478 EEDV--------VSWTAMIAGYTQHD--------LFAEALKLFQEMENQGIRSDNIGFSS 521
Query: 566 DVELSEKIKMLNH 578
+ I+ LN
Sbjct: 522 AISACAGIQALNQ 534
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 224/459 (48%), Gaps = 37/459 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + WN +ISG + + + +++LM+ + + S + S + +
Sbjct: 71 IPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQV 130
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
QIH I+ GFGS V +PL+D+Y+K G + AK F+ L K+ V + MI+G
Sbjct: 131 TEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISG--- 187
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
L QNG E EAI LF +M + + F SV
Sbjct: 188 ----------------------------LSQNGREDEAILLFCQMHKSAVIPTPYVFSSV 219
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+AC + + G+Q+H FI++ FV +ALV +Y + ++ AE +F M ++
Sbjct: 220 LSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDR 279
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+S+ +++ G Q G S+ A+++F MQ + ++PD T+ S++S+CA++ + +G Q H
Sbjct: 280 ISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSY 339
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ G+ S + + +L+ Y KC +IE +H F + V W ++ Y + G +E+
Sbjct: 340 VIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSES 399
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC--M 418
+F +M GL P++ T +L C+ G ++ G ++K G + + Y C +
Sbjct: 400 YWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKS-GFQ--FNVYVCSVL 456
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIH 457
ID+ ++ G L+ A+ + ++ D + W +++ H
Sbjct: 457 IDMYAKHGELDTARGILQRLR-EEDVVSWTAMIAGYTQH 494
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 139/291 (47%), Gaps = 7/291 (2%)
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M G+ + T+ + C +L + K++HA I ++ +GS L+D+Y
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A +F + NV W ++ G + + + +F M + PD+ T SV+ +
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 285 CA-NLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
C+ A + Q H + + G S V N L+ Y K G+++ + +F + ++D VS
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
W A++SG ++ G+ +E I LF +M + P VLSAC++ L + G +V
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIV 240
Query: 404 KEYGIRPIHDHYTC--MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
K +G+ + + C ++ + SR G L A+ +KM D I + +L+S
Sbjct: 241 K-WGLSS--ETFVCNALVTLYSRWGNLIAAEQIFSKM-HRRDRISYNSLIS 287
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 93/197 (47%), Gaps = 9/197 (4%)
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M+ GI + T + C N SL + + H R +G + + L+ Y G
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
++++ +LF+++ + W ++SG A++ + LF M++ + PDE T VL A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 386 CS--RAGLVEKGRHYFEIMVKEYGIRPIHDHYTC--MIDILSRAGRLEEAKSFINKMPFP 441
CS +A + + +I+ +G P+ C +ID+ S+ G ++ AK ++ F
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPL----VCNPLIDLYSKNGHVDLAKLVFERL-FL 175
Query: 442 PDAIGWATLLSSCRIHG 458
D++ W ++S +G
Sbjct: 176 KDSVSWVAMISGLSQNG 192
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/525 (41%), Positives = 320/525 (60%), Gaps = 1/525 (0%)
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
++ + +LF + D + + +M G ++ +AI LF + L D +TF S+L A
Sbjct: 77 MDYAHQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKA 136
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C A ++GKQ+H I+ +N +V L++MY C + A+ VF + VVS+
Sbjct: 137 CVVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSY 196
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
A++ GY ++ EA+ +F +Q ++P+D T+ SV+SSCA L +L+ G H
Sbjct: 197 NAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKK 256
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
GL ++ V+ AL+ Y KCG+++ + +F M+VRD +W+A++ YA G+ + + +
Sbjct: 257 NGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSM 316
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
FE+M ++PDE+T +G+L ACS GLV++G YF M + YGI P HY CM+D+L
Sbjct: 317 FEEMARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLG 376
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
RAG L EA FI+++P P I W TLLSSC HGN+E+ K +LELD + YV+
Sbjct: 377 RAGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVI 436
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LS++ A GKW+ V LR+ M KG K PGCS I+ + VH F + D S ++
Sbjct: 437 LSNLCARAGKWEDVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRA 496
Query: 544 LEKLNRKMIKEGYVPDMSSVLH-DVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVK 602
L++L +++ GYVPD S V+H D+E EK L +HSEKLAI+FGLL PPG IRVVK
Sbjct: 497 LDELVKELKSVGYVPDTSLVVHPDMEDEEKEITLRYHSEKLAISFGLLNTPPGTTIRVVK 556
Query: 603 NLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
NLRVC DCH+A K IS + REI++RD RFH FK+G+CSCGD+W
Sbjct: 557 NLRVCGDCHSAAKLISSLIDREIILRDVQRFHHFKDGKCSCGDYW 601
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 201/421 (47%), Gaps = 55/421 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKV------YNLMLKDGLGNLSRITFSTMLIMSSS 54
+P D V +N + G++ + A+ + YNL+ D TF ++L
Sbjct: 87 IPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDD-------YTFPSLLKACVV 139
Query: 55 RRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTM 114
+ G+Q+H +K G +V L++MYA + A+R FDE+ E +V YN +
Sbjct: 140 AKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAI 199
Query: 115 ITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
ITG R SR EA+ LFR+++ L +
Sbjct: 200 ITGYAR-----SSR--------------------------PNEALSLFRQLQARKLKPND 228
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
T SVL++C L AL+ GK IH ++ +N V V +AL+DMY KC S+ A SVF +
Sbjct: 229 VTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFES 288
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
M+ ++ +W+AM+V Y +G ++ + +F M R ++PD+ T ++ +C++ ++EG
Sbjct: 289 MSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLGLLYACSHTGLVDEG 348
Query: 295 TQ-FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD-EVSWTALVSGYA 352
+ F+ S V G+I I +V G+ G + ++++ +E+ ++ + W L+S +
Sbjct: 349 FRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTLLSSCS 408
Query: 353 KFGKANETIDLFEKML----SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
G + ++L SHG D V L + C+RAG E ++M+ + +
Sbjct: 409 SHGNLELAKQVMNQILELDDSHG--GDYVILSNL---CARAGKWEDVDTLRKLMIHKGAV 463
Query: 409 R 409
+
Sbjct: 464 K 464
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 153/288 (53%), Gaps = 6/288 (2%)
Query: 176 TFGSVLTAC-GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK---CKSIKYAESV 231
T+ S L +C +L+E KQI AF I+ ++++ + + L++ + S+ YA +
Sbjct: 24 TYPSSLLSCLPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQL 83
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASL 291
F + ++V + +M GY ++ +A+ +F + PDD+T S++ +C +
Sbjct: 84 FEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAF 143
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
++G Q H ++ GL V L+ Y C +++ + R+F+E+ VS+ A+++GY
Sbjct: 144 QQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGY 203
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
A+ + NE + LF ++ + LKP++VT++ VLS+C+ G ++ G+ E VK+ G+
Sbjct: 204 ARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHE-YVKKNGLDKY 262
Query: 412 HDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
T +ID+ ++ G L+ A S M D W+ ++ + +HG
Sbjct: 263 VKVNTALIDMYAKCGSLDGAISVFESMSV-RDTQAWSAMIVAYAMHGQ 309
>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
Length = 805
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 237/648 (36%), Positives = 357/648 (55%), Gaps = 41/648 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG--R 62
D V WN +I+ ++ +GS +A++++ ML+ G+ +TF ++ SS + +
Sbjct: 194 DVVLWNAMITANSQNGSPREALEIFYRMLQLGIPP-DLVTFVSVFKACSSSPSLRASQVK 252
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
H + + G GS V V + LV+ YA+ G I
Sbjct: 253 GFHTCLDETGLGSDVVVATALVNAYARCGEI----------------------------- 283
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
+ +R F M +++++SWT+MI Q G A++ F M LEG+ + T + L
Sbjct: 284 --DCAREFFAAMPERNAVSWTSMIAAFAQIG-HLLAVETFHAMLLEGVVPTRSTLFAALE 340
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF--RTMAWKNV 240
C L + + A +V + + LV Y +C + A VF R +
Sbjct: 341 GCEDL---HTARLVEAIAQEIGVATDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDA 397
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG- 299
TAM+ Y Q K++ GI PD + + +CA+LA+L EG Q H
Sbjct: 398 ALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHAC 457
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ L +T+ NA+V+ YG+CG++ D+ F+ M RDE+SW A++S A+ G+ +
Sbjct: 458 VAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVED 517
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
DLF ML G + V + +LSAC+ AGLVE G +F M ++G+ P +HY CM+
Sbjct: 518 CCDLFRAMLQEGFDAERVAFLNLLSACAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCMV 577
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L R GRL +A + MP PPDA W L+ +CRI+G+ E G++AAE +LEL + A
Sbjct: 578 DLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRANHTA 637
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+YV L +IY++ G+W+ + +R+ M + G+RK PG S I+ +S+VH F D S P S+
Sbjct: 638 AYVALCNIYSAAGRWEDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEA 697
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IYAELE++ + + GY VLHDVE +K ++L HSEKLAIAFG++ P G +R
Sbjct: 698 IYAELERVMGAIERAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLR 757
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V+KNLRVC DCHNA+K+ISK+ REI+VRD RFH FK+G CSCGD+W
Sbjct: 758 VIKNLRVCVDCHNASKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 204/465 (43%), Gaps = 52/465 (11%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V W +LIS + S G A+ +++ +L++G+ L I F ++L SS + GR IH
Sbjct: 94 VLWTVLISAYVSRGHSAAAIALFHRILQEGIA-LDAIVFVSVLSACSSEEFLAAGRLIHR 152
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEK-NIVMYNTMITGLLRRGLVE 125
++ G G V S LV MY + G + DA F L ++V++N
Sbjct: 153 CAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWN------------- 199
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
MIT QNG REA+++F M G+ D TF SV AC
Sbjct: 200 ------------------AMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACS 241
Query: 186 GLLALE--EGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
+L + K H + +V V +ALV+ Y +C I A F M +N VSW
Sbjct: 242 SSPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSW 301
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL--ASLEEGTQFHGRS 301
T+M+ + Q G AV+ F M G+ P TL + + C +L A L E +
Sbjct: 302 TSMIAAFAQIG-HLLAVETFHAMLLEGVVPTRSTLFAALEGCEDLHTARLVEAI-----A 355
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW-----TALVSGYAKFGK 356
G+ + + + LV Y +C ED+ R+F + R+E W TA+++ YA+
Sbjct: 356 QEIGVATDVAIVTDLVMAYARCDGQEDAIRVF---SAREEGEWDAALVTAMIAVYAQCRD 412
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
T L+ + G+ PD + I L AC+ + +GR + + +
Sbjct: 413 RRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGN 472
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
++ + + G L +A+ + MP D I W +LS+ HG VE
Sbjct: 473 AIVSMYGQCGSLRDARDAFDGMP-ARDEISWNAMLSASAQHGRVE 516
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 142/280 (50%), Gaps = 4/280 (1%)
Query: 110 MYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG 169
+ ++++ LR G +E + +F + K + WT +I+ + G AI LF + EG
Sbjct: 64 LASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEG 123
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
+A+D F SVL+AC L G+ IH + V SALV MY +C S++ A
Sbjct: 124 IALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDAN 183
Query: 230 SVFRTMAWK-NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL 288
++F + +VV W AM+ QNG EA++IF M + GI PD T SV +C++
Sbjct: 184 ALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSS 243
Query: 289 ASLEEGT--QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTA 346
SL FH TGL S + V+ ALV Y +CG I+ + F M R+ VSWT+
Sbjct: 244 PSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTS 303
Query: 347 LVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSAC 386
+++ +A+ G ++ F ML G+ P TL L C
Sbjct: 304 MIAAFAQIGHLL-AVETFHAMLLEGVVPTRSTLFAALEGC 342
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 135/250 (54%), Gaps = 11/250 (4%)
Query: 210 FVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN 269
++ S+LV MY +C S++ A VF +A K++V WT ++ Y G S A+ +F + +
Sbjct: 63 YLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQE 122
Query: 270 GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
GI D SV+S+C++ L G H ++ GL V++ALV+ YG+CG++ D+
Sbjct: 123 GIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDA 182
Query: 330 HRLFNEMNVR-DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS- 387
+ LF + D V W A+++ ++ G E +++F +ML G+ PD VT + V ACS
Sbjct: 183 NALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSS 242
Query: 388 ----RAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPD 443
RA V KG F + E G+ T +++ +R G ++ A+ F MP +
Sbjct: 243 SPSLRASQV-KG---FHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMP-ERN 297
Query: 444 AIGWATLLSS 453
A+ W +++++
Sbjct: 298 AVSWTSMIAA 307
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTML 49
MP D +SWN ++S A HG V D ++ ML++G + R+ F +L
Sbjct: 494 MPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGF-DAERVAFLNLL 541
>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
Length = 615
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/598 (37%), Positives = 343/598 (57%), Gaps = 36/598 (6%)
Query: 55 RRC-----VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIV 109
RRC ++ GR+IH + F+ + LVDMY K G + +AKR FD
Sbjct: 49 RRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFD-------- 100
Query: 110 MYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG 169
M+ K+ SWT ++ G +Q+G EAI LF M EG
Sbjct: 101 -----------------------AMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEG 137
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
D+ + +CG AL +G++IH+ ++ +A+++MY KC SI A
Sbjct: 138 ELPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAF 197
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
+VF M KNV+SW+ M+ + QN ++EA+ F MQ+ G+E D T SV+ + ++
Sbjct: 198 AVFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVG 257
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
+LE G H R + GL + I V N LV YGKCG+ +D+ +F+ M ++ VSW A+++
Sbjct: 258 ALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLA 317
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
Y + G++ E + LF+ M G++P+++T + +L CS +G + +F M +++GI
Sbjct: 318 AYGQNGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVSHFVEMRQDFGIT 377
Query: 410 PIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAES 469
P H+ C+ID+L R+G+LEEA+ I MP P DA+ W +LL +C H + + AAE
Sbjct: 378 PREVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLLCACVTHKDEDRAARAAEE 437
Query: 470 LLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSA 529
+ +P A+Y++LS++YA+ KWD +++R+ M + GVRK G SWI+ +VH F A
Sbjct: 438 AFQREPRCAAAYIMLSNLYAALKKWDEAAKVRKRMEQAGVRKQAGRSWIEIDKQVHEFVA 497
Query: 530 DDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGL 589
D P +I+ L++L +M +GY PD V+H +E EK ++L +HSEKLA+AFG+
Sbjct: 498 GDSIHPDKSRIFKTLQRLMSEMRIKGYEPDRKVVIHSMEEEEKDEVLFYHSEKLAVAFGI 557
Query: 590 LFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
PP P+ +VKNLRVCSDCH+A K+IS + R I VRD+ RFH F GECSCGD+W
Sbjct: 558 ASTPPRTPLCIVKNLRVCSDCHSAIKFISGVEGRRITVRDSNRFHHFDRGECSCGDYW 615
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 166/343 (48%), Gaps = 34/343 (9%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
SW +L++G G +A+++++ M ++G R+ + + + + GR+IH
Sbjct: 109 SWTMLMAGFVQSGRGVEAIQLFHRMCQEG-ELPDRVALLKFIDSCGAAKALSQGREIHSA 167
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
G S + + +++MY K G I +A F +PEKN++ ++TMI
Sbjct: 168 AASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFC-------- 219
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
QN L EA+ F+ M+ EG+ +D+ T+ SVL A +
Sbjct: 220 -----------------------QNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSV 256
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
ALE GK +H I+ ++ VG+ LV+MY KC S A VF +M KNVVSW AML
Sbjct: 257 GALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAML 316
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQFHGRSLVTGL 306
YGQNG S EA+ +F +M G+ P+D T +++ C++ ++ + F G+
Sbjct: 317 AAYGQNGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVSHFVEMRQDFGI 376
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALV 348
L+ G+ G +E++ L M V D V WT+L+
Sbjct: 377 TPREVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLL 419
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 154/298 (51%), Gaps = 5/298 (1%)
Query: 156 REAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSAL 215
REA+DL + G A ++ C G ALEEG++IH ++ F+ + L
Sbjct: 26 REAVDLLEQ---SGAAGGTGDLEQLIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLL 82
Query: 216 VDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDD 275
VDMY KC S+ A+ VF M KNV SWT ++ G+ Q+G EA+++F M + G PD
Sbjct: 83 VDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDR 142
Query: 276 FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNE 335
L I SC +L +G + H + G+ S + +NA++ YGKCG+I ++ +F
Sbjct: 143 VALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTR 202
Query: 336 MNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG 395
M ++ +SW+ +++ + + A+E + F+ M G++ D +T + VL A + G +E G
Sbjct: 203 MPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELG 262
Query: 396 RHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+ + + G+ ++++ + G ++A+ + M + + W +L++
Sbjct: 263 K-ALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSM-VEKNVVSWNAMLAA 318
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 108/201 (53%), Gaps = 6/201 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +SW+ +I+ + ++A+ + LM ++G+ L RIT+ ++L +S ++L
Sbjct: 203 MPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGM-ELDRITYVSVLDAYTSVGALEL 261
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +H I+ G + + VG+ LV+MY K G DA+ FD + EKN+V +N M+ +
Sbjct: 262 GKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQ 321
Query: 121 RGLVEESRRLFRGMK----DKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQF 175
G E+ LF M + I++ T++ +G ++A+ F EMR + G+ +
Sbjct: 322 NGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVSHFVEMRQDFGITPREV 381
Query: 176 TFGSVLTACGGLLALEEGKQI 196
FG ++ G LEE +++
Sbjct: 382 HFGCLIDMLGRSGKLEEAEEL 402
>gi|302785251|ref|XP_002974397.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
gi|300157995|gb|EFJ24619.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
Length = 679
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/648 (34%), Positives = 354/648 (54%), Gaps = 66/648 (10%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P + SW +LI+ A HG +A+ ++ MLK G+ S + + S+ + G
Sbjct: 96 PAKNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAG 155
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
R +H + ++GF V + LV MY+K G +
Sbjct: 156 RALHALLRRYGFQDAVVATTSLVSMYSKCGSL---------------------------- 187
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
EES R F M + +++SW MI ++ EA+ ++M LEG+
Sbjct: 188 ---EESMRTFESMTEPNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGI----------- 233
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
AC +V VG+ LV+MY KC + A + F + N++
Sbjct: 234 RAC----------------------SDVVVGTTLVNMYAKCSGLHDANAAFVKLQEPNII 271
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
+W ++ Y Q+ C +EA+++F M G+E D+ T +++ +C +LE+G H
Sbjct: 272 TWNVLISAYVQHCCFKEAMELFRRMLLLGLEMDEVTFINILGACCVPVALEDGRAIHACV 331
Query: 302 LVTGLIS-FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
L S + N ++ YGKCG+++D+ +F M+ D ++W +++ Y + G +E
Sbjct: 332 REHPLASNHAPLENVILNMYGKCGSLQDAEAMFKSMSQPDVIAWNTMIAAYGQHGHTSEA 391
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSA-CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ +E M G+ PD+ T + V+ A C+ AGL E+ YF M +++G+RP HY CM+
Sbjct: 392 LRFYELMQEEGVVPDDYTYVSVIDASCANAGLPEEAHAYFVSMQQDHGVRPGGGHYGCMV 451
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
+ L +AGRL +A++ I MPF PD + W + L++CR HG+++ GK AA+ + +DP
Sbjct: 452 ESLGKAGRLSDAETLIQCMPFEPDVLTWTSFLANCRSHGDMKRGKLAAKGAIRIDPEAST 511
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
YV L+ I+A G + S++R+ M ++G+RK+ G S IK + V+ F+A D S+P S +
Sbjct: 512 GYVALARIHADAGDFQEASRIRKLMLDRGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKE 571
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
I+ EL++L+++M GY PDM+ V HDVE +K +L HSE+LAIAFG++ PG P+R
Sbjct: 572 IFDELKRLDKEMKSAGYDPDMAHVAHDVEAGQKEPLLFAHSERLAIAFGIISTSPGTPLR 631
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
++KNLRVC DCH TK SKIT+REI+VRD+ RFH FKNG CSC DFW
Sbjct: 632 IMKNLRVCGDCHTMTKLTSKITRREIIVRDSNRFHHFKNGSCSCKDFW 679
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 128/251 (50%), Gaps = 10/251 (3%)
Query: 143 TTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIR 202
+T+++ Q G AID ++ + D V+ +C L AL EG++IH + R
Sbjct: 7 STLLSKRQQLGQIAAAIDALQKRK----DADLKECVRVIQSCARLGALAEGRRIHQLMRR 62
Query: 203 NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKI 262
+V+V + LV MY KC S++ A VF KNV SWT ++ Q+G S+EA+ +
Sbjct: 63 VGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALAL 122
Query: 263 FCNMQRNGIEPDDFTLGSVISSC-ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYG 321
F M + GI+P + + I++C A L G H G + + +LV+ Y
Sbjct: 123 FYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYS 182
Query: 322 KCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKP--DEV-- 377
KCG++E+S R F M + VSW A+++ +A+ + E + +KM G++ D V
Sbjct: 183 KCGSLEESMRTFESMTEPNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSDVVVG 242
Query: 378 -TLIGVLSACS 387
TL+ + + CS
Sbjct: 243 TTLVNMYAKCS 253
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 1/173 (0%)
Query: 281 VISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD 340
VI SCA L +L EG + H GL S + VSN LV YGKCG++E++ +F ++
Sbjct: 40 VIQSCARLGALAEGRRIHQLMRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKN 99
Query: 341 EVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
SWT L++ A+ G++ E + LF +ML G++P V+ ++ACS
Sbjct: 100 VFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALH 159
Query: 401 IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+++ YG + T ++ + S+ G LEE+ M P+A+ W ++++
Sbjct: 160 ALLRRYGFQDAVVATTSLVSMYSKCGSLEESMRTFESMT-EPNAVSWNAMIAA 211
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/652 (36%), Positives = 347/652 (53%), Gaps = 70/652 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + + N++I + ++G + VKV+ M + TF +L S + +
Sbjct: 100 IPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNV-RPDHYTFPCVLKACSCSGTIVI 158
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR+IHG K G S +FVG+ LV MY K G + +A+ DE+
Sbjct: 159 GRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEM----------------- 201
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SRR D +SW +++ G QN +A+++ REM ++ D T S+
Sbjct: 202 ------SRR--------DVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASL 247
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A + N +NV Y + +F M K++
Sbjct: 248 LPA-----------------VSNTTTENVM----------------YVKDMFFKMGKKSL 274
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW M+ Y +N EAV+++ M+ +G EPD ++ SV+ +C + ++L G + HG
Sbjct: 275 VSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGY 334
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
LI + + NAL+ Y KCG +E + +F M RD VSWTA++S Y G+ +
Sbjct: 335 IERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDA 394
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LF K+ GL PD + + L+ACS AGL+E+GR F++M Y I P +H CM+D
Sbjct: 395 VALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVD 454
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG+++EA FI M P+ W LL +CR+H + +IG AA+ L +L P
Sbjct: 455 LLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGY 514
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS+IYA G+W+ V+ +R M+ KG++K+PG S ++ +H F D S P SD+I
Sbjct: 515 YVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEI 574
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIP-----PG 595
Y EL+ L +KM + GYVPD S LHDVE +K L HSEKLAI F L+
Sbjct: 575 YRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSN 634
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
IR+ KNLR+C DCH A K IS+IT REI++RD RFH+F+ G CSCGD+W
Sbjct: 635 NTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 152/326 (46%), Gaps = 26/326 (7%)
Query: 167 LEGLAMDQ-------FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMY 219
L L +DQ F G VL + L + +H+ II D + N +G L+ Y
Sbjct: 28 LPKLELDQKSPQETVFLLGQVLDTYPDIRTL---RTVHSRIILEDLRCNSSLGVKLMRAY 84
Query: 220 CKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLG 279
K + A VF + +NV+ M+ Y NG E VK+F M + PD +T
Sbjct: 85 ASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFP 144
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
V+ +C+ ++ G + HG + GL S + V N LV+ YGKCG + ++ + +EM+ R
Sbjct: 145 CVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR 204
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
D VSW +LV GYA+ + ++ +++ +M S + D T+ +L A S + Y
Sbjct: 205 DVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TTENVMYV 262
Query: 400 EIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP---FPPDAIGWATLLSSC-- 454
+ M + G + + + MI + + EA ++M F PDA+ ++L +C
Sbjct: 263 KDMFFKMGKKSLVS-WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGD 321
Query: 455 --------RIHGNVEIGKWAAESLLE 472
+IHG +E K LLE
Sbjct: 322 TSALSLGKKIHGYIERKKLIPNLLLE 347
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/592 (39%), Positives = 340/592 (57%), Gaps = 35/592 (5%)
Query: 61 GRQIHGHILKFG-FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
GRQ+H ++ G F S F S L+ MY DA++ FDE+P N V+ M +G +
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
R LV S LFR + S + A+D E A+ F+ +
Sbjct: 168 RNNLVYPSLALFRKLIASGSAT----------------AVD-------EAAALVAFSASA 204
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC--KSIKYAESVFRTMAW 237
+ CG +L HA +++ + V + ++D Y K + + A VF TM
Sbjct: 205 RIPDCGITSSL------HALVVKTGLDGDAGVVNTMLDAYAKGGRRDLGAARKVFDTME- 257
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR--NGIEPDDFTLGSVISSCANLASLEEGT 295
K+VVSW +M+ Y QNG S +A+ ++ M I+ + TL +++ +CA+ +++ G
Sbjct: 258 KDVVSWNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGK 317
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
H + + GL + V ++V Y KCG +E + + F ++ ++ +SW+A+++GY G
Sbjct: 318 CIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHG 377
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
E +D+F +M G P+ +T I VL+ACS AGL++KGR+++ M K +GI P +HY
Sbjct: 378 HGQEALDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHY 437
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
CM+D+L RAG L+EA I +M PDA W LLS+CRIH NVE+ + +A+ L ELD
Sbjct: 438 GCMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLSACRIHKNVELAEISAKRLFELDA 497
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSP 535
N YVLLS+IYA G W V ++R ++ +G+ K PG S ++ K R H+F D S P
Sbjct: 498 TNCGYYVLLSNIYAEAGMWKDVERMRVLVKTRGIEKPPGYSSVELKGRTHLFYVGDKSHP 557
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
+IY+ L KL KM + GYVP+ SVLHD++ EK L+ HSEKLAIAF L+ PG
Sbjct: 558 QHKEIYSYLGKLLEKMQEAGYVPNTGSVLHDLDEEEKASALHIHSEKLAIAFALMNSVPG 617
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
I V+KNLRVC+DCH A K I+KI QREI+VRD RFH FK+G CSCGD+W
Sbjct: 618 SVIHVIKNLRVCTDCHTAIKLITKIAQREIIVRDLQRFHHFKDGSCSCGDYW 669
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 116/246 (47%), Gaps = 34/246 (13%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLK-DGLGNLSRITFSTMLIMSSSRRCVDLGRQ 63
D VSWN +I+ +A +G DA+ +Y ML G + +T S +L+ + + G+
Sbjct: 259 DVVSWNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKC 318
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
IH +++ G V+VG+ +VDMY+K G + A++ F ++ EKNI+ ++ MITG
Sbjct: 319 IHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGY----- 373
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
GM +G +EA+D+F EM G + TF SVL A
Sbjct: 374 ---------GM-----------------HGHGQEALDIFNEMCRSGQNPNYITFISVLAA 407
Query: 184 CGGLLALEEGKQ-IHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK-NVV 241
C L++G+ +A R + V +VD+ + + A + + M K +
Sbjct: 408 CSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAA 467
Query: 242 SWTAML 247
W A+L
Sbjct: 468 IWGALL 473
>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
Length = 588
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/593 (37%), Positives = 347/593 (58%), Gaps = 52/593 (8%)
Query: 55 RRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTM 114
RR + GRQ+H ++ G+ +++ + LV MYA+ G + DA+ D
Sbjct: 48 RRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLD------------- 94
Query: 115 ITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
GM +++ +SWT MI+G QN +A +LF M G+
Sbjct: 95 ------------------GMPERNVVSWTAMISGYSQNERPDQAWELFIMMLRAGI---- 132
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
+ KQ+HAF ++ + + ++FVGS+L+DMY K ++I+ A VF
Sbjct: 133 ----------------HQVKQVHAFAVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDM 176
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
+ ++VVS+TA+L GY Q G EEA+ +F + G++ + T +++++ + L+S++ G
Sbjct: 177 LPARDVVSYTAILSGYTQLGLDEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYG 236
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
Q HG L L F+ + N+L+ Y KCG + S R+F+ M R VSW A++ GY +
Sbjct: 237 KQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRH 296
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G A+E + LF M +KPD VTL+ VLS S GLV++G F+ +VKE +H
Sbjct: 297 GLAHEVVQLFRSMCDE-VKPDSVTLLAVLSGYSHGGLVDEGLDMFDHIVKEQSTLLNTEH 355
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
Y C+ID+L R+G+L++A + I KMPF P W +LL +CR+H NV +G++ A+ LL+++
Sbjct: 356 YGCVIDLLGRSGQLQKALNLIEKMPFQPTRAIWGSLLGACRVHTNVHVGEFVAQKLLDIE 415
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS 534
P N +YV+LS+IYA+ G W V ++R+ M +K V K+PG SW+ +H F + +
Sbjct: 416 PENAGNYVILSNIYAAAGMWKDVFRVRKLMLKKTVIKEPGRSWMILDKVIHTFHSCERFH 475
Query: 535 PYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPP 594
P + I A+++++ + G+VPD+S VLHDV+ +K +ML HSEKLAI FGL+ P
Sbjct: 476 PRKEDINAKIKEIYVAIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPS 535
Query: 595 GLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
L I+V+KNLR+C DCHN K++SK+ REI +RD RFHL G C+CGD+W
Sbjct: 536 DLTIQVMKNLRICVDCHNFAKFVSKVYGREISLRDKNRFHLITEGACTCGDYW 588
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 159/294 (54%), Gaps = 53/294 (18%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW +ISG++ + + A +++ +ML+ G+ +
Sbjct: 96 MPERNVVSWTAMISGYSQNERPDQAWELFIMMLRAGIHQV-------------------- 135
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+Q+H +K F ++FVGS L+DMYAK I +A+R FD LP +++V Y +++G +
Sbjct: 136 -KQVHAFAVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQ 194
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL EE A+DLFR + EG+ +Q TF ++
Sbjct: 195 LGLDEE-------------------------------ALDLFRLLYNEGMQCNQVTFTAL 223
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A GL +++ GKQ+H I+R + + + ++L+DMY KC + Y+ VF +M ++V
Sbjct: 224 LNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDSMPERSV 283
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
VSW AML+GYG++G + E V++F +M + ++PD TL +V+S ++ ++EG
Sbjct: 284 VSWNAMLMGYGRHGLAHEVVQLFRSMC-DEVKPDSVTLLAVLSGYSHGGLVDEG 336
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 144/282 (51%), Gaps = 22/282 (7%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
+ +T C AL EG+Q+HA ++ ++ +++ + LV MY +C +++ A +V M
Sbjct: 38 YDDAITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMP 97
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
+NVVSWTAM+ GY QN ++A ++F M R GI + Q
Sbjct: 98 ERNVVSWTAMISGYSQNERPDQAWELFIMMLRAGI--------------------HQVKQ 137
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H ++ T + V ++L+ Y K NI+++ R+F+ + RD VS+TA++SGY + G
Sbjct: 138 VHAFAVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGL 197
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
E +DLF + + G++ ++VT +L+A S ++ G+ ++++ +
Sbjct: 198 DEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRR-ELPFFMALQN 256
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ID+ S+ G+L ++ + MP + W +L HG
Sbjct: 257 SLIDMYSKCGKLLYSRRVFDSMP-ERSVVSWNAMLMGYGRHG 297
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 98/165 (59%), Gaps = 4/165 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VS+ ++SG+ G +A+ ++ L+ +G+ +++TF+ +L S +D
Sbjct: 177 LPARDVVSYTAILSGYTQLGLDEEALDLFRLLYNEGM-QCNQVTFTALLNALSGLSSMDY 235
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+HG IL+ ++ + + L+DMY+K G + ++R FD +PE+++V +N M+ G R
Sbjct: 236 GKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGR 295
Query: 121 RGLVEESRRLFRGMKDK---DSISWTTMITGLMQNGLEREAIDLF 162
GL E +LFR M D+ DS++ +++G GL E +D+F
Sbjct: 296 HGLAHEVVQLFRSMCDEVKPDSVTLLAVLSGYSHGGLVDEGLDMF 340
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 238/651 (36%), Positives = 369/651 (56%), Gaps = 24/651 (3%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + VSWN L+SG+ + + +A V+ LM + + ++++ M+ V
Sbjct: 74 MSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNV-----VSWTAMVKGYMQEGMVGE 128
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+ + + S+ + L+D G I A++ +D +P K++V MI GL R
Sbjct: 129 AESLFWRMPERNEVSWTVMFGGLIDD----GRIDKARKLYDMMPVKDVVASTNMIGGLCR 184
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G V+E+R +F M++++ ++WTTMITG QN A LF M + + ++ S+
Sbjct: 185 EGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK----TEVSWTSM 240
Query: 181 L---TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
L T G + EE ++ V +A++ + + I A VF M
Sbjct: 241 LLGYTLSGRIEDAEEFFEVMPM-------KPVIACNAMIVGFGEVGEISKARRVFDLMED 293
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
++ +W M+ Y + G EA+ +F MQ+ G+ P +L S++S CA LASL+ G Q
Sbjct: 294 RDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQV 353
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H + + V++ L+T Y KCG + + +F+ + +D + W +++SGYA G
Sbjct: 354 HAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLG 413
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
E + +F +M S G P++VTLI +L+ACS AG +E+G FE M ++ + P +HY+C
Sbjct: 414 EEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSC 473
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
+D+L RAG++++A I M PDA W LL +C+ H +++ + AA+ L E +P N
Sbjct: 474 TVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDN 533
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS-PY 536
+YVLLSSI AS+ KW V+ +R+ MR V K PGCSWI+ +VH+F+ + P
Sbjct: 534 AGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPE 593
Query: 537 SDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGL 596
I LEK + + + GY PD S VLHDV+ EK+ L+ HSE+LA+A+GLL +P G+
Sbjct: 594 QAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGV 653
Query: 597 PIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
PIRV+KNLRVC DCH A K ISK+T+REI++RDA RFH F NGECSC D+W
Sbjct: 654 PIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 186/379 (49%), Gaps = 24/379 (6%)
Query: 83 LVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISW 142
+V Y GL +A++ FDE+ E+N+V +N +++G ++ ++ E+R +F M +++ +SW
Sbjct: 54 IVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSW 113
Query: 143 TTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIR 202
T M+ G MQ G+ EA LF M FG ++ +++ ++++ +
Sbjct: 114 TAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDG----RIDKARKLYDMMPV 169
Query: 203 NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKI 262
D V + ++ C+ + A +F M +NVV+WT M+ GY QN + A K+
Sbjct: 170 KD----VVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKL 225
Query: 263 FCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYG 321
F M ++ + LG +S +E+ +F + +I+ NA++ +G
Sbjct: 226 FEVMPEKTEVSWTSMLLGYTLS-----GRIEDAEEFFEVMPMKPVIA----CNAMIVGFG 276
Query: 322 KCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIG 381
+ G I + R+F+ M RD +W ++ Y + G E +DLF +M G++P +LI
Sbjct: 277 EVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLIS 336
Query: 382 VLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMP 439
+LS C+ ++ GR +V+ + D Y + ++ + + G L +AK ++
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVR---CQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFS 393
Query: 440 FPPDAIGWATLLSSCRIHG 458
D I W +++S HG
Sbjct: 394 -SKDIIMWNSIISGYASHG 411
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 109/253 (43%), Gaps = 57/253 (22%)
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
I A F ++ +K + SW +++ GY NG +EA ++F D+ + +V+S
Sbjct: 33 INEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLF----------DEMSERNVVS- 81
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
N LV+ Y K I ++ +F M R+ VSW
Sbjct: 82 ----------------------------WNGLVSGYIKNRMIVEARNVFELMPERNVVSW 113
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
TA+V GY + G E LF +M +EV+ + G ++K R +++M
Sbjct: 114 TAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDKARKLYDMM-- 167
Query: 405 EYGIRPIHD--HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
P+ D T MI L R GR++EA+ ++M + + W T+++ R + V++
Sbjct: 168 -----PVKDVVASTNMIGGLCREGRVDEARLIFDEMR-ERNVVTWTTMITGYRQNNRVDV 221
Query: 463 GKWAAESLLELDP 475
A L E+ P
Sbjct: 222 ----ARKLFEVMP 230
>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 240/683 (35%), Positives = 376/683 (55%), Gaps = 71/683 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD- 59
MP H+ VSW L+ G++ G+ + + VY M ++G+ ++ TF+T + SS D
Sbjct: 436 MPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSG-NQNTFAT--VTSSCGLLEDQ 492
Query: 60 -LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
LG Q+ GHI+++GF V V + L+ M++
Sbjct: 493 VLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSS-------------------------- 526
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
VEE+ +F M + D ISW MI+ +GL RE++ F MR + T
Sbjct: 527 -----VEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLS 581
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
S+L+ C + L+ G+ IH +++ NV + + L+ +Y + + AE VF+ M +
Sbjct: 582 SLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTER 641
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI---------------- 282
+++SW +M+ Y Q+G + +KI + + G +PD T ++I
Sbjct: 642 DLISWNSMMACYVQDGKCLDGLKILAELLQMG-KPDRVTWNALIGGHAENEEPNEAVKAY 700
Query: 283 ------------------SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCG 324
++ ANLA LEEG Q HG + G S + V+NA + YGKCG
Sbjct: 701 KLIREKGIPANYITMVSLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCG 760
Query: 325 NIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
+ D ++ + R +SW L+S +A+ G + + F +ML G KPD VT + +LS
Sbjct: 761 EMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLS 820
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDA 444
AC+ GLV++G Y++ M +E+G+ P +H C+ID+L R+GRL A+ FI +MP PP+
Sbjct: 821 ACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPND 880
Query: 445 IGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTM 504
+ W +LL++CRIHGN+E+ + AE LLELDP + ++YVL S++ A+ GKW+ V LR+ M
Sbjct: 881 LAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEM 940
Query: 505 REKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVL 564
++K P CSW+K K +VH F + P + +I A+L +L + + GYVPD S L
Sbjct: 941 GSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFAL 1000
Query: 565 HDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQRE 624
HD++ +K L +HSE+LA+AFGL+ P +R+ KNLRVC DCH+ K++S I R+
Sbjct: 1001 HDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRK 1060
Query: 625 ILVRDAVRFHLFKNGECSCGDFW 647
I++RD RFH F G+CSCGD+W
Sbjct: 1061 IVLRDPYRFHHFSGGKCSCGDYW 1083
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 162/560 (28%), Positives = 274/560 (48%), Gaps = 63/560 (11%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSWN +I G+A G +D+ ++ ML+ GL T ++L S+ + + QI
Sbjct: 157 DVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVP-DCYTLGSVLRASAEGGGLIIANQI 215
Query: 65 HGHILKFGFGSYVFV--------------------------------------------- 79
HG I + G+GSY V
Sbjct: 216 HGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIY 275
Query: 80 --GSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL--VEESRRLFRGMK 135
G+ L+DMYAK G I DAKR FDE+ EKN++ + ++I+G + G + +R +F M+
Sbjct: 276 TMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMR 335
Query: 136 DKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG--GLLALEEG 193
++ SW+TM++G ++ GL EA+ LF +M G+ + F S++TAC G +A +EG
Sbjct: 336 HRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMA-DEG 394
Query: 194 KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQN 253
Q+H F+++ +V+VG+ALV Y + A+ +F M NVVSWT+++VGY +
Sbjct: 395 FQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDS 454
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVS 313
G E + ++ M++ G+ + T +V SSC L G Q G + G ++V+
Sbjct: 455 GNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVA 514
Query: 314 NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLK 373
N+L++ + ++E++ +F+ MN D +SW A++S YA G E++ F M +
Sbjct: 515 NSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNE 574
Query: 374 PDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL----SRAGRLE 429
+ TL +LS CS ++ GR ++VK G+ D C+ + L S AGR E
Sbjct: 575 TNSTTLSSLLSVCSSVDNLKWGRGIHGLVVK-LGL----DSNVCICNTLLTLYSEAGRSE 629
Query: 430 EAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYA 489
+A+ M D I W ++++ G G LL++ + ++ L +A
Sbjct: 630 DAELVFQAMT-ERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHA 688
Query: 490 SKGKWDHVSQLRRTMREKGV 509
+ + + + +REKG+
Sbjct: 689 ENEEPNEAVKAYKLIREKGI 708
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 144/551 (26%), Positives = 240/551 (43%), Gaps = 135/551 (24%)
Query: 39 NLSRITFSTMLIMSSSRR------------CVD-----LGRQIHGHILKFGFGSYVFVGS 81
NL R+ + L+ S+ R C+D G IH H++ GFGS + + +
Sbjct: 10 NLGRLAEALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNT 69
Query: 82 PLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMK------ 135
L+ Y K+G + A+ FD +PE+++V + M++G + G E++ LF M+
Sbjct: 70 KLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKA 129
Query: 136 -------------------------DKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL 170
++D +SW MI G G ++ +FR M GL
Sbjct: 130 NHALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGL 189
Query: 171 AMDQFTFGSVLTAC---GGLL--------------------------------ALEEGKQ 195
D +T GSVL A GGL+ +L K
Sbjct: 190 VPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKD 249
Query: 196 IHAFIIRND------------HKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
+ +++ D H+ +G+AL+DMY K I+ A+ F M KNV+SW
Sbjct: 250 LRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISW 309
Query: 244 TAMLVGYGQNGCS---------------------------------EEAVKIFCNMQRNG 270
T+++ GY ++G EEAV +FC M G
Sbjct: 310 TSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLG 369
Query: 271 IEPDDFTLGSVISSCANLASL-EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
+EP+ F + S+I++C+ + +EG Q HG + TG++ + V ALV FYG G + ++
Sbjct: 370 VEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNA 429
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
+LF EM + VSWT+L+ GY+ G E ++++++M G+ ++ T V S+C
Sbjct: 430 QKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSC--- 486
Query: 390 GLVEKGRHYFEIM--VKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGW 447
GL+E ++++ + +YG +I + S +EEA + M D I W
Sbjct: 487 GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMN-ECDIISW 545
Query: 448 ATLLSSCRIHG 458
++S+ HG
Sbjct: 546 NAMISAYAHHG 556
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 131/509 (25%), Positives = 237/509 (46%), Gaps = 68/509 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + SW+ ++SG+ G +AV ++ M G+ + S + S S D
Sbjct: 334 MRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADE 393
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+HG ++K G V+VG+ LV Y +GL+Y+A++
Sbjct: 394 GFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQK---------------------- 431
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
LF M D + +SWT+++ G +G E +++++ MR EG++ +Q TF +V
Sbjct: 432 ---------LFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATV 482
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
++CG L G Q+ II+ +D+V V ++L+ M+ S++ A VF M ++
Sbjct: 483 TSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDI 542
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SW AM+ Y +G E+++ F M+ E + TL S++S C+++ +L+ G HG
Sbjct: 543 ISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGL 602
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ GL S + + N L+T Y + G ED+ +F M RD +SW ++++ Y + GK +
Sbjct: 603 VVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDG 662
Query: 361 IDLFEKMLSHGLKPDEVT---LIG-------------------------------VLSAC 386
+ + ++L G KPD VT LIG L+A
Sbjct: 663 LKILAELLQMG-KPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSLAAT 721
Query: 387 SRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIG 446
+ ++E+G+ +++K +H M D+ + G + + + + P +
Sbjct: 722 ANLAVLEEGQQLHGLVIKLGFESDLHVTNAAM-DMYGKCGEMHDVLKMLPQ-PINRSRLS 779
Query: 447 WATLLSSCRIHGNVEIGKWAAESLLELDP 475
W L+S+ HG + + +L+L P
Sbjct: 780 WNILISAFARHGCFQKARETFHEMLKLGP 808
>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
gi|194688780|gb|ACF78474.1| unknown [Zea mays]
gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
Length = 695
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 242/656 (36%), Positives = 350/656 (53%), Gaps = 46/656 (7%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW L+ G HG +++ M + T S L G IHG
Sbjct: 71 VSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHG 130
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++ G+ + V S LV +Y+K G I DA
Sbjct: 131 LCVRAGYQEHDVVASSLVLVYSKGGRIGDA------------------------------ 160
Query: 127 SRRLFRGMKDKDSI-SWTTMITGLMQNGLEREAIDLFREMRL-EGLAM-DQFTFGSVLTA 183
RR+F G I +W M++G G R+A+ +FREMR EG D+FTF S+L A
Sbjct: 161 -RRVFDGAGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKA 219
Query: 184 CGGLLALEEGKQIHAFIIRN--DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
C GL A EG Q+HA + + N + ALVDMY KC+ + A VF + KNV+
Sbjct: 220 CSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVI 279
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
WTA++VG+ Q G EA+++F R+G PD L SV+ A+ A +E+G Q H
Sbjct: 280 QWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYG 339
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ + ++ N++V Y KCG +++ R+F EM + VSWT +V+G K G E +
Sbjct: 340 IKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAV 399
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
LFE+M + G++PDEVT + +LSACS AGLV++ R YF + ++ +RP +HY CM+D+
Sbjct: 400 ALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDL 459
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
L RAG L EA+ I MP P W TLLS+CR+H +V +G+ A + LL +D NP +Y
Sbjct: 460 LGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNY 519
Query: 482 VLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF---SADDWSSPYSD 538
V LS++ A G+W ++R MR +G++K GCSW++ VH F ++ + P +
Sbjct: 520 VTLSNVLAEAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAG 579
Query: 539 QIYAELEKLNRKMIKE-GY-VPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFI---- 592
I L + +M ++ GY D LHDV+ + + L HSE+LA+ LL
Sbjct: 580 DIRRVLRDMETRMREQLGYNADDARFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDG 639
Query: 593 -PPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G PIRV KNLRVC DCH K +S + +R ++VRDA RFH F++G CSC D+W
Sbjct: 640 GGHGEPIRVYKNLRVCGDCHEFFKGLSAVVRRALVVRDANRFHRFEHGSCSCKDYW 695
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 196/411 (47%), Gaps = 53/411 (12%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+HG I K GFGS +G+ L+DMY K G +
Sbjct: 23 GVQLHGAITKMGFGSDTMLGNNLIDMYVKCGEL--------------------------- 55
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG-LAMDQFTFGS 179
+ + +F GM+D++ +SWT ++ G +++G + L EMR A +++T +
Sbjct: 56 ----DLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSA 111
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW-K 238
L AC + G IH +R ++++ V S+LV +Y K I A VF
Sbjct: 112 SLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGS 171
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN--GIEPDDFTLGSVISSCANLASLEEGTQ 296
+ +W AM+ GY G +A+ +F M+R+ +PD+FT S++ +C+ L + EG Q
Sbjct: 172 GIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQ 231
Query: 297 FHGRSLVTGLISFITVSN-----ALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
H +G F T SN ALV Y KC + + ++F + ++ + WTA+V G+
Sbjct: 232 VHAAMTASG---FSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGH 288
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR-P 410
A+ G+ E ++LF + G +PD L V+ + LVE+GR V YGI+ P
Sbjct: 289 AQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQ-----VHCYGIKDP 343
Query: 411 IHDHYTC---MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ ++D+ + G +EA+ +M P+ + W T+++ HG
Sbjct: 344 TGTDVSAGNSIVDMYLKCGLPDEAERMFREMR-APNVVSWTTMVNGLGKHG 393
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 116/234 (49%), Gaps = 4/234 (1%)
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
Q +L A +L G Q+H I + + +G+ L+DMY KC + A VF
Sbjct: 4 QKMIAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFG 63
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR-NGIEPDDFTLGSVISSCANLASLE 292
M +NVVSWTA++VG+ ++G + +++ M+ + P+++TL + + +C +
Sbjct: 64 GMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTA 123
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV-SWTALVSGY 351
G HG + G V+++LV Y K G I D+ R+F+ + + +W A+VSGY
Sbjct: 124 AGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGY 183
Query: 352 AKFGKANETIDLFEKMLSH--GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
A G + + +F +M H +PDE T +L ACS G +G M
Sbjct: 184 AHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMT 237
>gi|115486035|ref|NP_001068161.1| Os11g0583200 [Oryza sativa Japonica Group]
gi|113645383|dbj|BAF28524.1| Os11g0583200 [Oryza sativa Japonica Group]
Length = 703
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 345/619 (55%), Gaps = 33/619 (5%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P VS+ ISG A HG A+ + ML+ GL S +S+ +G
Sbjct: 78 PHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIG 137
Query: 62 RQIHGHILKFGFGSY-VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
QIH ++FG+ FV +DMY K G + A+ F E+P
Sbjct: 138 PQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMP---------------- 181
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+++ ++W ++T + +G E I+ + +R G + + +
Sbjct: 182 ---------------NRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAF 226
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
AC G + L G+Q H F+++ + +V V +++VD Y KC+ A +VF M +N
Sbjct: 227 FNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNS 286
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW +M+ Y QNG EEA + +R+G EP DF + S +++CA L L G H
Sbjct: 287 VSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAV 346
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ + + + I V++ALV YGKCG +ED+ ++F E R+ V+W A++ GYA G A
Sbjct: 347 AVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNA 406
Query: 361 IDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ +F+ M+ G P+ +TL+ V+++CSR GL + G FE M + +GI P +HY C++
Sbjct: 407 LLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVV 466
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L RAG E+A I MP P W LL +C++HG E+G+ AAE L ELDP +
Sbjct: 467 DLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSG 526
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
++VLLS+++AS G+W + +R+ M+ G++KDPGCSW+ +K+ VH+F A D ++
Sbjct: 527 NHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNE 586
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
I A L KL ++M GY+PD L+D+E EK + HSEKLA+AFGL+ IPPG+PIR
Sbjct: 587 IQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIR 646
Query: 600 VVKNLRVCSDCHNATKYIS 618
++KNLR+C DCH A K+IS
Sbjct: 647 IMKNLRICVDCHRAFKFIS 665
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 161/359 (44%), Gaps = 35/359 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+WN +++ G + ++ Y L++ G + ++ + + L
Sbjct: 180 MPNRNVVAWNAVMTNAVLDGRPLETIEAY-FGLREAGGLPNVVSACAFFNACAGAMYLSL 238
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q HG ++K GF V V + +VD Y K A+ FD + +N V
Sbjct: 239 GEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSV----------- 287
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SW +M+ QNG E EA + R G F S
Sbjct: 288 --------------------SWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSA 327
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LT C GLL L G+ +HA +R+ N+FV SALVDMY KC ++ AE +F +N+
Sbjct: 328 LTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNL 387
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQ-FH 298
V+W AM+ GY G ++ A+ +F +M R+G P+ TL +VI+SC+ ++G + F
Sbjct: 388 VTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFE 447
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGK 356
G+ +V G+ G E ++ + M +R +S W AL+ GK
Sbjct: 448 TMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGK 506
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 2/197 (1%)
Query: 210 FVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN 269
F+ + LV++Y K A + + VVS+TA + G Q+G A+ F M R
Sbjct: 52 FICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRL 111
Query: 270 GIEPDDFTLGSVISSCANLASLEE-GTQFHGRSLVTGLISFIT-VSNALVTFYGKCGNIE 327
G+ P+DFT S + A+ G Q H ++ G + VS A + Y K G ++
Sbjct: 112 GLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLK 171
Query: 328 DSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS 387
+ LF EM R+ V+W A+++ G+ ETI+ + + G P+ V+ +AC+
Sbjct: 172 LARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACA 231
Query: 388 RAGLVEKGRHYFEIMVK 404
A + G + +VK
Sbjct: 232 GAMYLSLGEQFHGFVVK 248
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/682 (34%), Positives = 382/682 (56%), Gaps = 56/682 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +SWN +IS + G +A+ +++ ML G+ IT +++ + + +++
Sbjct: 194 MTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLP-DEITMVSLVSTCAKLKDLEM 252
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF----DELPEKNIVMYNTMIT 116
G+++H +I+ + + LVDMY+K G + D G DE E ++V++ T+++
Sbjct: 253 GKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKM-DEAHGLLSRCDE-SEVDVVLWTTLVS 310
Query: 117 GLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
G ++ ++++R+LF M ++ +SWTTM++G +Q G E+++LF++MR E + D+
Sbjct: 311 GYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVA 370
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
+VL+AC L + G+ +HAFI+ + F+G+AL+D+Y KC + A F +
Sbjct: 371 LVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLP 430
Query: 237 WKNVVSWTAMLVGYGQNGCSE-------------------------------EAVKIFCN 265
K+ SW +ML G+ ++G + E+ +IFC
Sbjct: 431 CKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCK 490
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
MQ + ++PD TL S++SSCA + +L G + + + AL+ YGKCG
Sbjct: 491 MQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGC 550
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+E ++ +F ++ ++ WTA+++ YA G+A E IDL+ +M G+KPD VT I +L+A
Sbjct: 551 VEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAA 610
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
CS GLV++G YF + Y I P HY CM+D+L R G LEE FI +MP PD
Sbjct: 611 CSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVS 670
Query: 446 GWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
W++L+ +CR H NVE+ + A + L+E+DP N ++VLLS+IYA G+WD VS++R +
Sbjct: 671 IWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLH 730
Query: 506 EKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLH 565
E GV K PG + I+ VH F A S+ S I L+ + R+++ + + D +S
Sbjct: 731 ETGVPKQPGFTMIEQNGVVHEFVA---SNLVSADILCMLQDIERRLLVKQELSDTTS--- 784
Query: 566 DVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREI 625
HSE+LA+AFGL+ PIRVV ++R+C DCH+ K IS+ REI
Sbjct: 785 ------------QHSERLAVAFGLINNQENSPIRVVNSVRMCRDCHSVMKLISQAYDREI 832
Query: 626 LVRDAVRFHLFKNGECSCGDFW 647
++RD RFH F +G CSC D+W
Sbjct: 833 VIRDNYRFHRFTDGHCSCKDYW 854
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 132/522 (25%), Positives = 231/522 (44%), Gaps = 104/522 (19%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
+ + WN L+ G + ++ Y M+ G+ L TF ++ V LG ++
Sbjct: 97 ESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVL-LDISTFHFLIHACCKNFDVKLGSEV 155
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG ILK GFG + + L+ +Y+K G + + + F+++ ++++ +NTMI+ + +G+
Sbjct: 156 HGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMY 215
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
REA+DLF EM + G+ D+ T S+++ C
Sbjct: 216 -------------------------------REALDLFDEMLVSGVLPDEITMVSLVSTC 244
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC---------------------- 222
L LE GK++H +I+ N + + LVDMY KC
Sbjct: 245 AKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVL 304
Query: 223 -----------KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGI 271
I A +F M +++VSWT M+ GY Q G E++++F M+ +
Sbjct: 305 WTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENV 364
Query: 272 EPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHR 331
PD+ L +V+S+C +L + G H + G++ + NAL+ Y KCG ++++ R
Sbjct: 365 IPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALR 424
Query: 332 -------------------------------LFNEMNVRDEVSWTALVSGYAKFGKANET 360
FN++ +D VSW +V+ Y K NE+
Sbjct: 425 TFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNES 484
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG---RHYFEIMVKEYGIRPIHDHYTC 417
++F KM S +KPD+ TLI +LS+C++ G + G Y E E GI + T
Sbjct: 485 FEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIE--KNEIGIDAMLG--TA 540
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+ID+ + G +E A ++ + W ++++ + G
Sbjct: 541 LIDMYGKCGCVEMAYEIFTQI-IEKNVFVWTAMMAAYAMEGQ 581
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 175/357 (49%), Gaps = 36/357 (10%)
Query: 136 DKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQ 195
+ +SI W T++ ++ G +E ++ + M +G+ +D TF ++ AC ++ G +
Sbjct: 95 EPESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSE 154
Query: 196 IHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGC 255
+H I++ N + + L+ +Y KC +K +F M ++V+SW M+ Y G
Sbjct: 155 VHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGM 214
Query: 256 SEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNA 315
EA+ +F M +G+ PD+ T+ S++S+CA L LE G + H + L ++ N
Sbjct: 215 YREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNC 274
Query: 316 LVTFYGKCGNIEDSH---------------------------------RLFNEMNVRDEV 342
LV Y KCG ++++H +LF++MN R V
Sbjct: 275 LVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLV 334
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
SWT ++SGY + G E+++LF++M + PDEV L+ VLSAC + GR +
Sbjct: 335 SWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFI 394
Query: 403 VKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS-CRIHG 458
V YG+ ++D+ ++ G+L+EA ++P A W ++L CR G
Sbjct: 395 VT-YGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPC-KSAASWNSMLDGFCRSGG 449
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 163/337 (48%), Gaps = 14/337 (4%)
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L +C + E IHA +I + + + S ++ ++ A +
Sbjct: 41 LLKSCSNI---REFSPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPE 97
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+ W +L + GC +E ++ + +M G+ D T +I +C ++ G++ HG
Sbjct: 98 SIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHG 157
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
R L G +++N L+ Y KCG +++ +LF +M RD +SW ++S Y G E
Sbjct: 158 RILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYRE 217
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG-RHYFEIMVKEYGIRPIHDHYTCM 418
+DLF++ML G+ PDE+T++ ++S C++ +E G R + I+ + IR C+
Sbjct: 218 ALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRG--SLLNCL 275
Query: 419 IDILSRAGRLEEAKSFINKMPFPP-DAIGWATLLSSCRIHGNVEIGKW--AAESLLELDP 475
+D+ S+ G+++EA +++ D + W TL+S G V+ K A + +++
Sbjct: 276 VDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVS-----GYVKSNKIDKARQLFDKMNE 330
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKD 512
+ S+ + S Y G + +L + MR + V D
Sbjct: 331 RSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPD 367
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/589 (38%), Positives = 336/589 (57%), Gaps = 70/589 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D +WN ++SG A H +A+ + +M K+G L+ TF++ L S ++
Sbjct: 112 MPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGF-VLNEYTFASGLSACSGLNDMNR 170
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G QIH I K S V++GS LVDMY+K G + DA++ FDE
Sbjct: 171 GVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDE------------------ 212
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
M D++ +SW ++IT QNG EA+ +F+ M + D+ T SV
Sbjct: 213 -------------MGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASV 259
Query: 181 LTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESVFRTM---- 235
++AC L A++ G+++HA +++ D ++++ + +A VDMY KC IK A +F +M
Sbjct: 260 ISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRN 319
Query: 236 ---------------------------AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR 268
A +NVVSW A++ GY QNG +EEA+ +FC ++R
Sbjct: 320 VIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKR 379
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFH------GRSLVTGLISFITVSNALVTFYGK 322
+ P +T +++ +CA+LA L G Q H G +G I V N+L+ Y K
Sbjct: 380 ESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVK 439
Query: 323 CGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGV 382
CG +E+ + +F +M RD VSW A++ G+A+ G NE ++LF +ML G KPD +T+IGV
Sbjct: 440 CGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGV 499
Query: 383 LSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPP 442
LSAC AG VE+GRHYF M +++G+ P+ DHYTCM+D+L RAG LEEAKS I +MP P
Sbjct: 500 LSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQP 559
Query: 443 DAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRR 502
D++ W +LL++C++H N+ +GK+ AE L E++ N YVLLS++YA GKW +R+
Sbjct: 560 DSVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLSNMYAELGKWGDAMNVRK 619
Query: 503 TMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKM 551
MR++GV K PGCSWIK H+F D S P QI++ L+ L +M
Sbjct: 620 LMRKEGVTKQPGCSWIKIPGHAHVFMVKDKSHPRKKQIHSLLDILIAEM 668
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 138/430 (32%), Positives = 233/430 (54%), Gaps = 44/430 (10%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
R +H ++K GF + VF+ + L+D YAK G + D ++ FD++P++N+ +N+++TGL +
Sbjct: 40 RCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKL 99
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G ++E+ LFR M ++D +W +M++G Q+ EA+ F M EG ++++TF S L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGL 159
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+AC GL + G QIH+ I ++ +V++GSALVDMY KC ++ A+ VF M +NVV
Sbjct: 160 SACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVV 219
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW +++ Y QNG + EA+K+F M + +EPD+ TL SVIS+CA+L++++ G + H R
Sbjct: 220 SWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARV 279
Query: 302 L-VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV---------------------- 338
+ + L + I +SNA V Y KC I+++ +F+ M +
Sbjct: 280 VKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAA 339
Query: 339 ---------RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
R+ VSW AL++GY + G+ E + LF + + P T +L AC+
Sbjct: 340 RLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADL 399
Query: 390 GLVEKG--------RHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFP 441
+ G +H F+ E + + +ID+ + G +EE KM
Sbjct: 400 ADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNS---LIDMYVKCGCVEEGYLVFRKM-ME 455
Query: 442 PDAIGWATLL 451
D + W ++
Sbjct: 456 RDCVSWNAMI 465
>gi|15237212|ref|NP_200075.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
gi|75180446|sp|Q9LTF4.1|PP429_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g52630
gi|8953718|dbj|BAA98081.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332008860|gb|AED96243.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
Length = 588
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/600 (38%), Positives = 353/600 (58%), Gaps = 33/600 (5%)
Query: 49 LIMSSSR-RCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKN 107
L++SS+R R G Q+HG+++K G V + L++ Y+K L +D
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFD------------ 68
Query: 108 IVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL 167
SRR F K S +W+++I+ QN L +++ ++M
Sbjct: 69 -------------------SRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMA 109
Query: 168 EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY 227
L D S +C L + G+ +H ++ + +VFVGS+LVDMY KC I Y
Sbjct: 110 GNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVY 169
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN 287
A +F M +NVV+W+ M+ GY Q G +EEA+ +F + +D++ SVIS CAN
Sbjct: 170 ARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCAN 229
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
LE G Q HG S+ + S V ++LV+ Y KCG E ++++FNE+ V++ W A+
Sbjct: 230 STLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAM 289
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYG 407
+ YA+ + I+LF++M G+KP+ +T + VL+ACS AGLV++GR+YF+ M KE
Sbjct: 290 LKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM-KESR 348
Query: 408 IRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAA 467
I P HY ++D+L RAGRL+EA I MP P W LL+SC +H N E+ +AA
Sbjct: 349 IEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAA 408
Query: 468 ESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF 527
+ + EL P + ++ LS+ YA+ G+++ ++ R+ +R++G +K+ G SW++ +++VH F
Sbjct: 409 DKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTF 468
Query: 528 SADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAF 587
+A + S +IY +L +L +M K GY+ D S VL +V+ EK + + +HSE+LAIAF
Sbjct: 469 AAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAF 528
Query: 588 GLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
GL+ P PIRV+KNLRVC DCHNA K++S T+R I+VRD RFH F++G+CSC D+W
Sbjct: 529 GLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 155/352 (44%), Gaps = 77/352 (21%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+W+ ++ G+A G +A+ ++ L + L ++ +FS+++ + ++ ++L
Sbjct: 177 MPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLA-VNDYSFSSVISVCANSTLLEL 235
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQIHG +K F S FVGS LV +Y+K G+ A + F+E+P KN+ ++N
Sbjct: 236 GRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWN-------- 287
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
M+ Q+ ++ I+LF+ M+L G+ + TF +V
Sbjct: 288 -----------------------AMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNV 324
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC ++EG+ + + + ++LVDM
Sbjct: 325 LNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDM---------------------- 362
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC-----ANLASLEEGT 295
G+ G +EA+++ NM I+P + G++++SC LA+
Sbjct: 363 ---------LGRAGRLQEALEVITNMP---IDPTESVWGALLTSCTVHKNTELAAFAADK 410
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
F + +G+ I++SNA Y G ED+ + + R E T L
Sbjct: 411 VFELGPVSSGM--HISLSNA----YAADGRFEDAAKARKLLRDRGEKKETGL 456
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 240/683 (35%), Positives = 361/683 (52%), Gaps = 70/683 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + WN LI G+AS + ++ ML ++ TF + +S + + L
Sbjct: 132 IPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHL 191
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +HG ++K S +F+ + L++ Y
Sbjct: 192 GSVLHGMVIKASLSSDLFILNSLINFYGS------------------------------- 220
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G + + R+F M KD +SW MI GL +A+ LF+EM ++ + + T SV
Sbjct: 221 SGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSV 280
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+AC + LE G+ I ++I N +++ + +A++DMY KC I A+ +F M+ K++
Sbjct: 281 LSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDI 340
Query: 241 VSWTAMLVG-------------------------------YGQNGCSEEAVKIFCNMQ-R 268
VSWT ML G Y QNG A+ +F MQ
Sbjct: 341 VSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLS 400
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIED 328
+PD+ TL + + A L +++ G H + ++ +L+ Y KCGN+
Sbjct: 401 KDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNK 460
Query: 329 SHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
+ +F+ + +D W+A++ A +G+ +DLF ML +KP+ VT +L AC+
Sbjct: 461 AMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNH 520
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
AGLV +G FE M YGI P HY C++DI RAG LE+A SFI KMP PP A W
Sbjct: 521 AGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWG 580
Query: 449 TLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
LL +C HGNVE+ + A ++LLEL+P N ++VLLS+IYA G W+ VS LR+ MR+
Sbjct: 581 ALLGACSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIYAKAGDWEKVSNLRKLMRDSD 640
Query: 509 VRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVE 568
V+K+P CS I VH F D S P+S +IY++L++++ K GY PDMS++L +
Sbjct: 641 VKKEPWCSSIDVNGIVHEFLVGDNSHPFSQKIYSKLDEISEKFKPIGYKPDMSNLL---Q 697
Query: 569 LSEKIKM----LNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQRE 624
LSE+ + LN HSEKLAIAFGL+ PIR+VKN+R+C DCH K +S++ R+
Sbjct: 698 LSEEDNLMEQSLNVHSEKLAIAFGLISTASSQPIRIVKNIRICGDCHAFAKLVSQLYDRD 757
Query: 625 ILVRDAVRFHLFKNGECSCGDFW 647
IL+RD RFH F+ G+CSC D+W
Sbjct: 758 ILLRDRYRFHHFRGGKCSCLDYW 780
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 153/305 (50%), Gaps = 12/305 (3%)
Query: 194 KQIHAFIIRNDHKDNVFVGSALVDMYC--KCKSIKYAESVFRTMAWKNVVSWTAMLVGYG 251
KQIHA ++R + + S L+ Y C + YA++VF + N+ W ++ GY
Sbjct: 89 KQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYA 148
Query: 252 QNGCSEEAVKIFCNMQRNGIE-PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFI 310
+ ++ IF +M + E P+ FT + + + L L G+ HG + L S +
Sbjct: 149 SSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDL 208
Query: 311 TVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH 370
+ N+L+ FYG G + +HR+F M +D VSW A+++ +A G ++ + LF++M
Sbjct: 209 FILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMK 268
Query: 371 GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEE 430
+KP+ +T++ VLSAC++ +E GR + ++ G M+D+ + G + +
Sbjct: 269 DVKPNVITMVSVLSACAKKIDLEFGR-WICSYIENNGFTEHLILNNAMLDMYVKCGCIND 327
Query: 431 AKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKW-AAESLLELDPYN-PASYVLLSSIY 488
AK NKM D + W T+L G+ ++G + A + + P+ A++ L S Y
Sbjct: 328 AKDLFNKMS-EKDIVSWTTMLD-----GHAKLGNYDEAHCIFDAMPHKWTAAWNALISAY 381
Query: 489 ASKGK 493
GK
Sbjct: 382 EQNGK 386
>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
Length = 805
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/648 (36%), Positives = 358/648 (55%), Gaps = 41/648 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG--R 62
D V WN +I+ ++ +GS +A++++ ML+ G+ +TF ++ SS + +
Sbjct: 194 DVVLWNAMITANSQNGSPREALEIFYRMLQLGIPP-DLVTFVSVFKACSSSPSLRASQVK 252
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
H + + G GS V V + LV+ YA+ G I
Sbjct: 253 GFHACLDETGLGSDVVVATALVNAYARCGEI----------------------------- 283
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
+ +R+ F M +++++SWT+MI Q G A++ F M LEG+ + T + L
Sbjct: 284 --DCARKFFAEMPERNAVSWTSMIAAFTQIG-HLLAVETFHAMLLEGVVPTRSTLFAALE 340
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF--RTMAWKNV 240
C L + + A +V + + LV Y +C + A VF R +
Sbjct: 341 GCEDL---RVARLVEAIAQEIGVVTDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDA 397
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG- 299
TAM+ Y Q K++ GI PD + + +CA+LA+L EG Q H
Sbjct: 398 ALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHAC 457
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ L +T+ NA+V+ YG+CG++ D+ F+ M RDE+SW A++S A+ G+ +
Sbjct: 458 VAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVED 517
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
DLF ML G + + + +LSAC+ AGLV+ G +F M ++G+ P +HY CM+
Sbjct: 518 CCDLFRAMLQEGFDAERIAFLNLLSACAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCMV 577
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L R GRL +A + MP PPDA W L+ +CRI+G+ E G++AAE +LEL + A
Sbjct: 578 DLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRADHTA 637
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+YV L +IY++ G+WD + +R+ M + G+RK PG S I+ +S+VH F D S P S+
Sbjct: 638 AYVALCNIYSAAGRWDDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEA 697
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IYAELE++ + + GY VLHDVE +K ++L HSEKLAIAFG++ P G +R
Sbjct: 698 IYAELERVMGAIERAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLR 757
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V+KNLRVC DCHNA+K+ISK+ REI+VRD RFH FK+G CSCGD+W
Sbjct: 758 VIKNLRVCVDCHNASKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 205/465 (44%), Gaps = 52/465 (11%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V W +LIS + S G A+ +++ +L++G+ L I F ++L SS + GR IH
Sbjct: 94 VLWTVLISAYVSRGHSAAAIALFHRILQEGIA-LDAIVFVSVLSACSSEEFLAAGRLIHR 152
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEK-NIVMYNTMITGLLRRGLVE 125
++ G G V S LV MY + G + DA F L ++V++N
Sbjct: 153 CAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWN------------- 199
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
MIT QNG REA+++F M G+ D TF SV AC
Sbjct: 200 ------------------AMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACS 241
Query: 186 GLLALE--EGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
+L + K HA + +V V +ALV+ Y +C I A F M +N VSW
Sbjct: 242 SSPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSW 301
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL--ASLEEGTQFHGRS 301
T+M+ + Q G AV+ F M G+ P TL + + C +L A L E
Sbjct: 302 TSMIAAFTQIG-HLLAVETFHAMLLEGVVPTRSTLFAALEGCEDLRVARLVEAIAQE--- 357
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW-----TALVSGYAKFGK 356
G+++ + + LV Y +C ED+ R+F + R+E W TA+++ YA+
Sbjct: 358 --IGVVTDVAIVTDLVMAYARCDGQEDAIRVF---SAREEGEWDAALVTAMIAVYAQCRD 412
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
T L+ + G+ PD + I L AC+ + +GR + + +
Sbjct: 413 RRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGN 472
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
++ + + G L +A+ + MP D I W +LS+ HG VE
Sbjct: 473 AIVSMYGQCGSLRDARDAFDGMP-ARDEISWNAMLSASAQHGRVE 516
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 143/280 (51%), Gaps = 4/280 (1%)
Query: 110 MYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG 169
+ ++++ LR G +E + +F + K + WT +I+ + G AI LF + EG
Sbjct: 64 LASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEG 123
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
+A+D F SVL+AC L G+ IH + V SALV MY +C S++ A
Sbjct: 124 IALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDAN 183
Query: 230 SVFRTMAWK-NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL 288
++F + +VV W AM+ QNG EA++IF M + GI PD T SV +C++
Sbjct: 184 ALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSS 243
Query: 289 ASLEEGT--QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTA 346
SL FH TGL S + V+ ALV Y +CG I+ + + F EM R+ VSWT+
Sbjct: 244 PSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTS 303
Query: 347 LVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSAC 386
+++ + + G ++ F ML G+ P TL L C
Sbjct: 304 MIAAFTQIGHLL-AVETFHAMLLEGVVPTRSTLFAALEGC 342
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 136/250 (54%), Gaps = 11/250 (4%)
Query: 210 FVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN 269
++ S+LV MY +C S++ A VF +A K++V WT ++ Y G S A+ +F + +
Sbjct: 63 YLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQE 122
Query: 270 GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
GI D SV+S+C++ L G H ++ GL V++ALV+ YG+CG++ D+
Sbjct: 123 GIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDA 182
Query: 330 HRLFNEMNVR-DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS- 387
+ LF + D V W A+++ ++ G E +++F +ML G+ PD VT + V ACS
Sbjct: 183 NALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSS 242
Query: 388 ----RAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPD 443
RA V KG F + E G+ T +++ +R G ++ A+ F +MP +
Sbjct: 243 SPSLRASQV-KG---FHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMP-ERN 297
Query: 444 AIGWATLLSS 453
A+ W +++++
Sbjct: 298 AVSWTSMIAA 307
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTML 49
MP D +SWN ++S A HG V D ++ ML++G + RI F +L
Sbjct: 494 MPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGF-DAERIAFLNLL 541
>gi|223948379|gb|ACN28273.1| unknown [Zea mays]
Length = 648
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 242/656 (36%), Positives = 350/656 (53%), Gaps = 46/656 (7%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW L+ G HG +++ M + T S L G IHG
Sbjct: 24 VSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHG 83
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++ G+ + V S LV +Y+K G I DA
Sbjct: 84 LCVRAGYQEHDVVASSLVLVYSKGGRIGDA------------------------------ 113
Query: 127 SRRLFRGMKDKDSI-SWTTMITGLMQNGLEREAIDLFREMRL-EGLAM-DQFTFGSVLTA 183
RR+F G I +W M++G G R+A+ +FREMR EG D+FTF S+L A
Sbjct: 114 -RRVFDGAGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKA 172
Query: 184 CGGLLALEEGKQIHAFIIRN--DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
C GL A EG Q+HA + + N + ALVDMY KC+ + A VF + KNV+
Sbjct: 173 CSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVI 232
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
WTA++VG+ Q G EA+++F R+G PD L SV+ A+ A +E+G Q H
Sbjct: 233 QWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYG 292
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ + ++ N++V Y KCG +++ R+F EM + VSWT +V+G K G E +
Sbjct: 293 IKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAV 352
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
LFE+M + G++PDEVT + +LSACS AGLV++ R YF + ++ +RP +HY CM+D+
Sbjct: 353 ALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDL 412
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
L RAG L EA+ I MP P W TLLS+CR+H +V +G+ A + LL +D NP +Y
Sbjct: 413 LGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNY 472
Query: 482 VLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF---SADDWSSPYSD 538
V LS++ A G+W ++R MR +G++K GCSW++ VH F ++ + P +
Sbjct: 473 VTLSNVLAEAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAG 532
Query: 539 QIYAELEKLNRKMIKE-GY-VPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFI---- 592
I L + +M ++ GY D LHDV+ + + L HSE+LA+ LL
Sbjct: 533 DIRRVLRDMETRMREQLGYNADDARFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDG 592
Query: 593 -PPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G PIRV KNLRVC DCH K +S + +R ++VRDA RFH F++G CSC D+W
Sbjct: 593 GGHGEPIRVYKNLRVCGDCHEFFKGLSAVVRRALVVRDANRFHRFEHGSCSCKDYW 648
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 172/342 (50%), Gaps = 22/342 (6%)
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG-LAMDQFTFGSVLTACGGLL 188
+F GM+D++ +SWT ++ G +++G + L EMR A +++T + L AC +
Sbjct: 14 VFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVG 73
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW-KNVVSWTAML 247
G IH +R ++++ V S+LV +Y K I A VF + +W AM+
Sbjct: 74 DTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMV 133
Query: 248 VGYGQNGCSEEAVKIFCNMQRN--GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
GY G +A+ +F M+R+ +PD+FT S++ +C+ L + EG Q H +G
Sbjct: 134 SGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASG 193
Query: 306 LISFITVSN-----ALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
F T SN ALV Y KC + + ++F + ++ + WTA+V G+A+ G+ E
Sbjct: 194 ---FSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEA 250
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR-PIHDHYTC-- 417
++LF + G +PD L V+ + LVE+GR V YGI+ P +
Sbjct: 251 LELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQ-----VHCYGIKDPTGTDVSAGN 305
Query: 418 -MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
++D+ + G +EA+ +M P+ + W T+++ HG
Sbjct: 306 SIVDMYLKCGLPDEAERMFREMR-APNVVSWTTMVNGLGKHG 346
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 218 MYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR-NGIEPDDF 276
MY KC + A VF M +NVVSWTA++VG+ ++G + +++ M+ + P+++
Sbjct: 1 MYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEY 60
Query: 277 TLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
TL + + +C + G HG + G V+++LV Y K G I D+ R+F+
Sbjct: 61 TLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGA 120
Query: 337 NVRDEV-SWTALVSGYAKFGKANETIDLFEKMLSH--GLKPDEVTLIGVLSACSRAGLVE 393
+ + +W A+VSGYA G + + +F +M H +PDE T +L ACS G
Sbjct: 121 GLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATR 180
Query: 394 KGRHYFEIMV 403
+G M
Sbjct: 181 EGAQVHAAMT 190
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/626 (34%), Positives = 363/626 (57%), Gaps = 41/626 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNL----SRITFSTMLIMSSSRRCVDL 60
D + N LIS +A +G A +V+ +GN+ + T+STML + + +
Sbjct: 178 DAATCNCLISAYARNGFFVQAFQVFM-----QIGNMGTRPNHYTYSTMLAVCGTISAIQE 232
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H H++K + S VG+ L+ +Y+K G++
Sbjct: 233 GKQLHAHVVKMQYLSETAVGNALLTLYSKCGMM--------------------------- 265
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
EE+ +F ++ ++ ISWT I G Q+G ++A+ F MR G+ ++FTF V
Sbjct: 266 ----EEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIV 321
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA-WKN 239
L +CG + +G+ H +I+ VFVG+A++DMY + AE F+ M +
Sbjct: 322 LASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAAS 381
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VSW A++ GY N E+A++ FC M + + ++FT ++ +C++ SL Q H
Sbjct: 382 NVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHS 441
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
R + + + S + V+++L+ Y +CG++E++ ++F +++ D VSW +++ Y++ G +
Sbjct: 442 RLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWK 501
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
I L KM+ G KP T + VLSACS +GLV++G+ +F+ MV++Y I+P H +CM+
Sbjct: 502 AIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMV 561
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
DIL RAG+LE A FI K+ P A W LL++CR + N+++ ++ AE +L+L+P +
Sbjct: 562 DILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKILDLEPNDAT 621
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
YV LS++YA G+W RR M +K + K+PGCSWI+ ++++ F + D + P +
Sbjct: 622 VYVTLSNMYAEVGRWADAENQRRLMEQKEISKEPGCSWIEVNNKMYKFFSHDKAHPEMPK 681
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
+Y +L++L R++ GY P ++VLH K +++ +HSEKLA+ FGLL +PPG PIR
Sbjct: 682 VYEKLKQLVRQIQDIGYSPPTTTVLHPESRQPKEQLILYHSEKLAVCFGLLSLPPGKPIR 741
Query: 600 VVKNLRVCSDCHNATKYISKITQREI 625
V+KNLRVC DC++ KYIS+IT R I
Sbjct: 742 VLKNLRVCLDCYSTMKYISRITDRYI 767
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 168/518 (32%), Positives = 256/518 (49%), Gaps = 77/518 (14%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMS---SSRRCVDLGRQIH 65
W +L A G +A+ ++ M K+GL ++ ++L S RR G +H
Sbjct: 872 WIVLTGACARRGFYEEALSAFSEMQKEGL-RPNQFVLPSILKACGHLSDRR---TGENMH 927
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
ILK F S ++ S L+ MY+K G VE
Sbjct: 928 TVILKNSFESDAYIISALIYMYSKCGH-------------------------------VE 956
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
++ R+F + DKD + M++G Q+G EA+BL ++M+ G+
Sbjct: 957 KACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGV--------------- 1001
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK----NVV 241
K NV + L+ + + VFR M +VV
Sbjct: 1002 --------------------KPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVV 1041
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SWT+++ G+ QN + E F M G P T+ S++ +C N+A+L G + HG +
Sbjct: 1042 SWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYA 1101
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+V G+ + V +ALV Y KCG I ++ LF M R+ V+W +L+ GYA G NE I
Sbjct: 1102 MVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAI 1161
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
+LF +M K D +T VL+ACS AG+VE G F M ++Y I P +HY CM+D+
Sbjct: 1162 ELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDL 1221
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
L RAG+L EA I MP PD W LL +CR HGN+E+ + AAE L EL+P +P S
Sbjct: 1222 LGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPESPGSS 1281
Query: 482 VLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIK 519
+LLS++YA G+W + +++++ M+++ K PGCSWI+
Sbjct: 1282 LLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 1319
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 207/416 (49%), Gaps = 38/416 (9%)
Query: 57 CVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMIT 116
CV+LGR+ H ++K G GS FV + L+DMYAK G + A R +D++ + N +I+
Sbjct: 128 CVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLIS 187
Query: 117 GLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
R NG +A +F ++ G + +T
Sbjct: 188 AYAR-------------------------------NGFFVQAFQVFMQIGNMGTRPNHYT 216
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
+ ++L CG + A++EGKQ+HA +++ + VG+AL+ +Y KC ++ AE VF ++
Sbjct: 217 YSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLR 276
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
+N++SWTA + G+ Q+G ++A+K F M+ +GIEP++FT V++SC + +G
Sbjct: 277 QRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRM 336
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM-NVRDEVSWTALVSGYAKFG 355
FH + + G+ S + V A++ Y G ++++ + F +M VSW AL++GY
Sbjct: 337 FHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNE 396
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
K + ++ F +M+ + +E T + ACS + ++K +H
Sbjct: 397 KIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVA- 455
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL 471
+ +I+ ++ G LE A ++ D + W +++ + +G+ W A LL
Sbjct: 456 SSLIEAYTQCGSLENAVQVFTQIS-DADVVSWNSIIKAYSQNGD----PWKAIFLL 506
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 201/440 (45%), Gaps = 78/440 (17%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
T++ + M + R + GR +H H++ G + + L+ Y + G + +A++ FD++
Sbjct: 805 TYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKI 864
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
P NI RR W + + G EA+ F
Sbjct: 865 PNTNI-------------------RR------------WIVLTGACARRGFYEEALSAFS 893
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
EM+ EGL +QF S+L ACG L G+ +H I++N + + ++ SAL+ MY KC
Sbjct: 894 EMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCG 953
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
++ A VF + K++V AM+ GY Q+G EA+ + MQ+ G++P+ + ++I+
Sbjct: 954 HVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIA 1013
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+Q +S+V+ + +T + +E D VS
Sbjct: 1014 GF---------SQVGDKSMVSEVFRLMTAN-----------GVEP-----------DVVS 1042
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR--HYFEI 401
WT+++SG+ + +E D F++ML G P VT+ +L AC+ + G+ H + +
Sbjct: 1043 WTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAM 1102
Query: 402 MV---KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
++ K+ +R + ++D+ ++ G + EAK MP + + W +L+ HG
Sbjct: 1103 VIGVEKDVYVR------SALVDMYAKCGYISEAKILFYMMP-ERNTVTWNSLIFGYANHG 1155
Query: 459 ----NVEIGKWAAESLLELD 474
+E+ ES +LD
Sbjct: 1156 YCNEAIELFNQMEESDTKLD 1175
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 150/293 (51%), Gaps = 2/293 (0%)
Query: 169 GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYA 228
G Q+ F S L+ CG +E G++ H F+++ + FV ++L+DMY KC + A
Sbjct: 109 GFPHRQYVF-SALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSA 167
Query: 229 ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL 288
V+ M + + ++ Y +NG +A ++F + G P+ +T ++++ C +
Sbjct: 168 VRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTI 227
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
++++EG Q H + +S V NAL+T Y KCG +E++ +F + R+ +SWTA +
Sbjct: 228 SAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASI 287
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
+G+ + G + + F M G++P+E T VL++C GR + ++K+ G+
Sbjct: 288 NGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKK-GM 346
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
T +ID+ S G ++EA+ +M + W L++ ++ +E
Sbjct: 347 ASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIE 399
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 86/166 (51%), Gaps = 5/166 (3%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW +ISG + ++ + ML G S +T S++L ++ + G++I
Sbjct: 1039 DVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCP-SSVTISSLLPACTNVANLRHGKEI 1097
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG+ + G V+V S LVDMYAK G I +AK F +PE+N V +N++I G G
Sbjct: 1098 HGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYC 1157
Query: 125 EESRRLFRGMKDKDS----ISWTTMITGLMQNGLEREAIDLFREMR 166
E+ LF M++ D+ +++T ++ G+ LF +M+
Sbjct: 1158 NEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQ 1203
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 102/240 (42%), Gaps = 9/240 (3%)
Query: 277 TLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
T I A +L G H ++ GL + L++FY +CG + ++ +LF+++
Sbjct: 805 TYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKI 864
Query: 337 NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR 396
+ W L A+ G E + F +M GL+P++ L +L AC G
Sbjct: 865 PNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGE 924
Query: 397 HYFEIMVKEYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
+ +++K D Y + +I + S+ G +E+A + + D + ++S
Sbjct: 925 NMHTVILKN---SFESDAYIISALIYMYSKCGHVEKACRVFDWI-VDKDLVVMNAMVSGY 980
Query: 455 RIHGNVEIGKWAAESLLE--LDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKD 512
HG V + + + + P N S+ L + ++ G VS++ R M GV D
Sbjct: 981 AQHGFVHEALBLVQKMQQAGVKP-NVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPD 1039
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+WN LI G+A+HG N+A++++N M ++ L +TF+ +L S V+L
Sbjct: 1136 MPERNTVTWNSLIFGYANHGYCNEAIELFNQM-EESDTKLDHLTFTAVLNACSHAGMVEL 1194
Query: 61 GRQIHGHIL-KFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITGL 118
G + + K+ + + +VD+ + G + +A +P E + ++ ++
Sbjct: 1195 GESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGAC 1254
Query: 119 LRRGLVE 125
G +E
Sbjct: 1255 RNHGNIE 1261
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/647 (35%), Positives = 361/647 (55%), Gaps = 42/647 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +SWN +++ H +G+ A+++ ML+ + +TF+T L S+ ++ + +
Sbjct: 326 DLISWNSMMASHVDNGNYPRALELLIEMLQTRKAT-NYVTFTTAL---SACYNLETLKIV 381
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H ++ G + +G+ LV MY K G + A+
Sbjct: 382 HAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQ--------------------------- 414
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
R+ + M D+D ++W +I G N AI+ F +R EG+ ++ T ++L+A
Sbjct: 415 ----RVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSA- 469
Query: 185 GGLLA----LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+ L+ G IHA I+ + FV S+L+ MY +C + + +F +A KN
Sbjct: 470 --FLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNS 527
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+W A+L G EEA+K+ M+ +GI D F+ + NL L+EG Q H
Sbjct: 528 STWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSL 587
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ G S V NA + YGKCG I+D R+ + R + SW L+S A+ G +
Sbjct: 588 IIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQA 647
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ F +ML GL+PD VT + +LSACS GLV++G YF M ++G+ +H C+ID
Sbjct: 648 REAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIID 707
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG+L EA++FINKMP PP + W +LL++C+IHGN+E+ + AA+ L ELD + ++
Sbjct: 708 LLGRAGKLTEAENFINKMPVPPTDLVWRSLLAACKIHGNLELARKAADRLFELDSSDDSA 767
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVL S++ AS +W V +R+ M ++K P CSW+K K++V F D P + +I
Sbjct: 768 YVLYSNVCASTRRWRDVENVRKQMESHNIKKKPACSWVKLKNQVTTFGMGDQYHPQNAEI 827
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
YA+LE+L + + + GY+PD S L D + +K L +HSE++A+AFGL+ G P+R+
Sbjct: 828 YAKLEELKKIIREAGYMPDTSYSLQDTDEEQKEHNLWNHSERIALAFGLINSSEGSPLRI 887
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCH+ K +S+I R+I++RDA RFH F +G+CSC D+W
Sbjct: 888 FKNLRVCGDCHSVFKMVSQIIGRKIILRDAYRFHHFSSGKCSCSDYW 934
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 209/451 (46%), Gaps = 36/451 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + SWN L+SG G A++ + ML+ G+ S + S + S +
Sbjct: 18 MPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVAASLVTACDRSGCMTEG 77
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
Q+H H++K G VFVG+ L+ Y G + + F E+ E NIV
Sbjct: 78 AFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIV----------- 126
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SWT+++ G NG +E + ++R +R +G+ ++ +V
Sbjct: 127 --------------------SWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATV 166
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ +CG L+ G Q+ +I++ V V ++L+ M+ C SI+ A VF M ++
Sbjct: 167 IRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDT 226
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SW +++ NG E++++ F M+ + D T+ +++ C + +L G HG
Sbjct: 227 ISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGM 286
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ +GL S + V N+L++ Y + G ED+ +F++M RD +SW ++++ + G
Sbjct: 287 VVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRA 346
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++L +ML + VT LSAC + K H F I++ + I + ++
Sbjct: 347 LELLIEMLQTRKATNYVTFTTALSACYNLETL-KIVHAFVILLGLHHNLIIGN---ALVT 402
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
+ + G + A+ MP D + W L+
Sbjct: 403 MYGKFGSMAAAQRVCKIMP-DRDEVTWNALI 432
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 204/403 (50%), Gaps = 38/403 (9%)
Query: 86 MYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTM 145
MY+K G I A+ FD++PE+N +N +++G +R G W
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVG-------------------WY-- 39
Query: 146 ITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGK-QIHAFIIRND 204
++A+ F M G+ + S++TAC + EG Q+HA +I+
Sbjct: 40 ----------QKAMQFFCHMLEHGVRPSSYVAASLVTACDRSGCMTEGAFQVHAHVIKCG 89
Query: 205 HKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFC 264
+VFVG++L+ Y + + VF+ + N+VSWT+++VGY NGC +E + ++
Sbjct: 90 LACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYR 149
Query: 265 NMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCG 324
++R+G+ ++ + +VI SC L G Q G + +GL + ++V+N+L++ +G C
Sbjct: 150 RLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCD 209
Query: 325 NIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
+IE++ +F++M RD +SW ++++ G ++++ F +M K D +T+ +L
Sbjct: 210 SIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLP 269
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDA 444
C A + GR ++VK G+ ++ + S+AG+ E+A+ +KM D
Sbjct: 270 VCGSAQNLRWGRGLHGMVVKS-GLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMR-ERDL 327
Query: 445 IGWATLLSSCRIHGNVEIGKWAAESLLE-LDPYNPASYVLLSS 486
I W ++++S +GN A E L+E L +YV ++
Sbjct: 328 ISWNSMMASHVDNGNY---PRALELLIEMLQTRKATNYVTFTT 367
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 190/384 (49%), Gaps = 45/384 (11%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRC---VD--LG 61
VSW L+ G+A +G V + + VY + +DG+ + +T++ R C VD LG
Sbjct: 126 VSWTSLMVGYAYNGCVKEVMSVYRRLRRDGV-YCNENAMATVI-----RSCGVLVDKMLG 179
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
Q+ G ++K G + V V + L+ M+ I
Sbjct: 180 YQVLGSVIKSGLDTTVSVANSLISMFGNCDSI---------------------------- 211
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
EE+ +F MK++D+ISW ++IT + NG ++++ F +MR D T ++L
Sbjct: 212 ---EEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALL 268
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
CG L G+ +H ++++ + NV V ++L+ MY + + AE VF M ++++
Sbjct: 269 PVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLI 328
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW +M+ + NG A+++ M + + T + +S+C NL +L+ H
Sbjct: 329 SWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETLK---IVHAFV 385
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
++ GL + + NALVT YGK G++ + R+ M RDEV+W AL+ G+A + N I
Sbjct: 386 ILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAI 445
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSA 385
+ F + G+ + +T++ +LSA
Sbjct: 446 EAFNLLREEGVPVNYITIVNLLSA 469
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 172/356 (48%), Gaps = 41/356 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTML-IMSSSRRCVD 59
MP D V+WN LI GHA + N A++ +NL+ ++G+ ++ IT +L S +D
Sbjct: 420 MPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVP-VNYITIVNLLSAFLSPDDLLD 478
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G IH HI+ GF FV S L+ MYA+ G + + FD L KN
Sbjct: 479 HGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKN------------ 526
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
S +W +++ G EA+ L +MR +G+ +DQF+F
Sbjct: 527 -------------------SSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSV 567
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW-- 237
G L L+EG+Q+H+ II++ + N +V +A +DMY KC I + VFR +
Sbjct: 568 AHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEI---DDVFRILPQPR 624
Query: 238 -KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-T 295
++ SW ++ ++G ++A + F M G+ PD T S++S+C++ ++EG
Sbjct: 625 SRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLA 684
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALVSG 350
F S G+ + I ++ G+ G + ++ N+M V ++ W +L++
Sbjct: 685 YFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAA 740
>gi|225459429|ref|XP_002284321.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Vitis vinifera]
Length = 700
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 247/692 (35%), Positives = 364/692 (52%), Gaps = 55/692 (7%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
SWN +ISG +G + DA+ +++ ML + + IT +++L + + + LG+ IH
Sbjct: 12 SWNGIISGCVQNGYLEDALDMFSRMLWYP-EDPNIITIASILPACTGLKALRLGKAIHAI 70
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
LK G V+V ++DMY+K G A++ F + KN M+N MI + G VE++
Sbjct: 71 ALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAAYVNEGKVEDA 130
Query: 128 RRLFRGMKD----KDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG----- 178
L R M+ D I++ T+++G +NGL+ +A +L EM GL + +F
Sbjct: 131 LGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAFELLSEMVQMGLKPNVVSFNVLISG 190
Query: 179 ------------------------------------------SVLTACGGLLALEEGKQI 196
L AC L +GK+I
Sbjct: 191 FQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACADLNLWCQGKEI 250
Query: 197 HAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCS 256
H + +RN + N+FV SALVDMY KC + A VF + +N VSW A++ GY N
Sbjct: 251 HGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYIYNKQP 310
Query: 257 EEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFI-TVSNA 315
EEA+K+F M G++P T + +C ++A++ G HG + L +++A
Sbjct: 311 EEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAIASA 370
Query: 316 LVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPD 375
L+ Y KCG+I D+ +F+ +D W A++S ++ G A +F +M G+ PD
Sbjct: 371 LIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFVQMELLGILPD 430
Query: 376 EVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFI 435
+T + +LSAC+R GLVE+G YF M YG+ +HYTCM+ IL AG L+EA FI
Sbjct: 431 HITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYTCMVGILGGAGLLDEALDFI 490
Query: 436 NKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWD 495
+MP+PPDA WATLL +CR+H N EIG+ AA++L EL+P N +Y+LLS+IY S G WD
Sbjct: 491 RQMPYPPDACMWATLLQACRVHSNPEIGERAAKALFELEPDNATNYMLLSNIYVSSGMWD 550
Query: 496 HVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEG 555
LR MR + + CS++ S + F + S P ++I +KL RKM G
Sbjct: 551 FAKNLRSFMRGRKLLTIKECSYLTVGSHICTFKGGESSHPELEEILEAWDKLARKMELSG 610
Query: 556 YVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATK 615
Y P + V D E E H+EKLAI FG++ P+ V KN+R+C DCH + K
Sbjct: 611 YFP-LDPVFDDEE-KELDPFSCLHTEKLAICFGIISSNTYRPVHVSKNIRMCIDCHTSAK 668
Query: 616 YISKITQREILVRDAVRFHLFKNGECSCGDFW 647
ISKI REI V+D +H K+G CSC D W
Sbjct: 669 LISKIDGREIFVKDVCFYHHMKDGICSCQDRW 700
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 166/360 (46%), Gaps = 49/360 (13%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLG-------NLSRITFSTMLIMSSSRRCVD 59
VS+N+LISG G +A+KV+ +M G NLS + + + I + C D
Sbjct: 182 VSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLS-MRPNPITITGALPACAD 240
Query: 60 L-----GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTM 114
L G++IHG+ L+ GF +FV S LVDMYAK + A + F + +N V +N +
Sbjct: 241 LNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNAL 300
Query: 115 ITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
+ G + N EA+ LF EM EGL
Sbjct: 301 MAGYI-------------------------------YNKQPEEALKLFLEMLGEGLQPSS 329
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRN--DHKDNVFVGSALVDMYCKCKSIKYAESVF 232
TF + ACG + A+ G+ +H + + D N + SAL+DMY KC SI A+SVF
Sbjct: 330 ITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNA-IASALIDMYAKCGSILDAKSVF 388
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
+ K+V W AM+ + +G + A +F M+ GI PD T S++S+CA +E
Sbjct: 389 DSEVEKDVPLWNAMISAFSVHGMARNAFAVFVQMELLGILPDHITFVSLLSACARDGLVE 448
Query: 293 EGTQ-FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALVSG 350
EG + F+ + G+ + + +V G G ++++ +M D W L+
Sbjct: 449 EGWKYFNSMEISYGVAATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQA 508
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 1/205 (0%)
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
V SW ++ G QNG E+A+ +F M +P+ T+ S++ +C L +L G H
Sbjct: 9 TVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIH 68
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
+L G++ + V +++ Y KCG+ + + ++F + ++ W +++ Y GK
Sbjct: 69 AIALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAAYVNEGKVE 128
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
+ + L M G KPD +T +LS +R GL + MV + G++P + +
Sbjct: 129 DALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAFELLSEMV-QMGLKPNVVSFNVL 187
Query: 419 IDILSRAGRLEEAKSFINKMPFPPD 443
I ++G EA M P D
Sbjct: 188 ISGFQQSGLSYEALKVFRIMQSPSD 212
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/615 (37%), Positives = 348/615 (56%), Gaps = 37/615 (6%)
Query: 39 NLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKR 98
N ++ TF ++ + + G +H ++ G ++ + L++MY LG + A +
Sbjct: 71 NPTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACK 130
Query: 99 GFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREA 158
FDE EK I ++N + R L SR +
Sbjct: 131 VFDETREKTIFVWNAIF-----RALAMASR--------------------------GEDL 159
Query: 159 IDLFREMRLEGLAMDQFTFGSVLTACG----GLLALEEGKQIHAFIIRNDHKDNVFVGSA 214
+ L+ +M G+ ++FT+ VL AC + L +GK+IHA I+R+ ++ +V V +
Sbjct: 160 LVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTT 219
Query: 215 LVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE-- 272
L+D+Y + + YA SVF M KN+VSW+AM+ Y +N +A+++F M +
Sbjct: 220 LLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTV 279
Query: 273 PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRL 332
P+ T+ SV+ +CA+LA+LE G H L GL S + V N L+T YG+CG I R+
Sbjct: 280 PNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRV 339
Query: 333 FNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLV 392
F+ M RD +SW +L+S Y G + I +FE M++ G+ P +T I VL ACS AGLV
Sbjct: 340 FDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLV 399
Query: 393 EKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
E+ + FE M+ +Y I P +HY CM+DIL RA RL+EA I M F P W +LL
Sbjct: 400 EEAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLG 459
Query: 453 SCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKD 512
SCRIH NVE+ + A+ L EL+P N +YVLLS IYA W+ V ++R+ + +G++K
Sbjct: 460 SCRIHCNVELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWNDVRRVRKQLESRGLQKI 519
Query: 513 PGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEK 572
P CSWI+ K +++ + + +P +++ A L L ++ +GYVP + V +D++ EK
Sbjct: 520 PSCSWIEVKRKIYSLVSIEEYNPQIEELCAFLITLLTEIKNQGYVPQTNVVTYDLDEEEK 579
Query: 573 IKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVR 632
+++ HS KLA+AFGL+ G IR+ NLR+C DCH K++SK T REIL+RD R
Sbjct: 580 ERIVLGHSGKLAVAFGLINTSKGEIIRISNNLRLCEDCHAFMKFVSKFTNREILLRDVNR 639
Query: 633 FHLFKNGECSCGDFW 647
FH FK+G CSCGD+W
Sbjct: 640 FHCFKDGVCSCGDYW 654
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 145/292 (49%), Gaps = 38/292 (13%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTML---IMSSSRRC-VDLGRQI 64
WN + A D + +Y M G+ + +R T++ +L ++S C + G++I
Sbjct: 143 WNAIFRALAMASRGEDLLVLYGQMNWIGIPS-NRFTYTYVLKACVVSELSICPLRKGKEI 201
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H HIL+ G+ +V V + L+D+YA+ G + A F +P+KNIV
Sbjct: 202 HAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIV--------------- 246
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL--AMDQFTFGSVLT 182
SW+ MI +N + +A++LF+ M LE + T SVL
Sbjct: 247 ----------------SWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQ 290
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
AC L ALE GK +HA+++R + V + L+ MY +C I + VF M ++V+S
Sbjct: 291 ACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVIS 350
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
W +++ YG +G ++A++IF NM G+ P T +V+ +C++ +EE
Sbjct: 351 WNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEA 402
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 32/195 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSR-ITFSTMLIMSSSRRCVD 59
MP + VSW+ +I+ +A + A++++ +M+ + + IT ++L +S ++
Sbjct: 240 MPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALE 299
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G+ +H ++L+ G S LP + NT+IT
Sbjct: 300 HGKLVHAYVLRRGLDS--------------------------TLP-----VLNTLITMYG 328
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
R G + +R+F MK +D ISW ++I+ +GL ++AI +F M G++ TF +
Sbjct: 329 RCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFIT 388
Query: 180 VLTACGGLLALEEGK 194
VL AC +EE K
Sbjct: 389 VLCACSHAGLVEEAK 403
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 113/266 (42%), Gaps = 20/266 (7%)
Query: 252 QNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFIT 311
+ G ++AV++ C P T +I+SC SL +G H R + +GL
Sbjct: 55 RGGNLKQAVQLLCCEP----NPTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPY 110
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG 371
++ L+ Y G+++ + ++F+E + W A+ A + + + L+ +M G
Sbjct: 111 LATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIG 170
Query: 372 LKPDEVTLIGVLSACSRAGL----VEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
+ + T VL AC + L + KG+ +++ +H T ++D+ +R G
Sbjct: 171 IPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHV-MTTLLDVYARFGY 229
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY----NPASYVL 483
+ A S MP + + W+ ++ +C + + ++ L+ NP + V
Sbjct: 230 VSYASSVFGAMP-DKNIVSWSAMI-ACYAKNEMPMKALELFQIMMLEACDTVPNPITMVS 287
Query: 484 LSSIYAS-----KGKWDHVSQLRRTM 504
+ AS GK H LRR +
Sbjct: 288 VLQACASLAALEHGKLVHAYVLRRGL 313
>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 233/643 (36%), Positives = 367/643 (57%), Gaps = 37/643 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V+WN LI+ H +AV++Y LM+ + + T S++ S ++ HG
Sbjct: 131 VTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLP-DEYTLSSVFKAFSDLSLEKEAQRSHG 189
Query: 67 HILKFGFG-SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
+ G S VFVGS LVDMY K G +AK D + EK++V+
Sbjct: 190 LAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLI-------------- 235
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
T +I G Q G + EA+ F+ M +E + +++T+ SVL +CG
Sbjct: 236 -----------------TALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCG 278
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
L + GK IH ++++ + + ++L+ MY +C + + VF+ + + N VSWT+
Sbjct: 279 NLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTS 338
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
++ G QNG E A+ F M R+ I+P+ FTL S + C+NLA EEG Q HG G
Sbjct: 339 LISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYG 398
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
+ L+ YGKCG + + +F+ ++ D +S ++ YA+ G E +DLFE
Sbjct: 399 FDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFE 458
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
+M++ GL+P++VT++ VL AC+ + LVE+G F+ K+ I +DHY CM+D+L RA
Sbjct: 459 RMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRA 517
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
GRLEEA+ ++ PD + W TLLS+C++H VE+ + +LE++P + + +L+S
Sbjct: 518 GRLEEAEMLTTEV-INPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMS 576
Query: 486 SIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADD-WSSPYSDQIYAEL 544
++YAS GKW+ V +++ M++ ++K+P SW++ H F A D +S P S+QI L
Sbjct: 577 NLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENL 636
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
E+L +K GYV D S V D+E + K + L+ HSEKLAIAF ++ G IR++KNL
Sbjct: 637 EELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFA-VWRNVGGSIRILKNL 695
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RVC DCH+ K +S++ +REI+ RD+ RFH F++G CSCGD+W
Sbjct: 696 RVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 201/411 (48%), Gaps = 35/411 (8%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
FS +L R + + I H+LK GF + + GS LVD K G I
Sbjct: 67 NFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEI-SGSKLVDASLKCGDI---------- 115
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
+ +R++F GM ++ ++W ++I L+++ +EA++++R
Sbjct: 116 ---------------------DYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYR 154
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAF-IIRNDHKDNVFVGSALVDMYCKC 222
M + D++T SV A L +E ++ H +I NVFVGSALVDMY K
Sbjct: 155 LMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKF 214
Query: 223 KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
+ A+ V + K+VV TA++VGY Q G EAVK F +M ++P+++T SV+
Sbjct: 215 GKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVL 274
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
SC NL + G HG + +G S + +L+T Y +C ++DS R+F + ++V
Sbjct: 275 ISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQV 334
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
SWT+L+SG + G+ + F KM+ +KP+ TL L CS + E+GR I+
Sbjct: 335 SWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIV 394
Query: 403 VKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
K YG + +ID+ + G + A+ + + D I T++ S
Sbjct: 395 TK-YGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLS-EVDVISLNTMIYS 443
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 183/377 (48%), Gaps = 35/377 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V LI G++ G +AVK + ML + + + T++++LI + + + G+ I
Sbjct: 231 DVVLITALIVGYSQKGEDTEAVKAFQSMLVEKV-QPNEYTYASVLISCGNLKDIGNGKLI 289
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG ++K GF S + + L+ MY LR LV
Sbjct: 290 HGLMVKSGFESALASQTSLLTMY-------------------------------LRCSLV 318
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
++S R+F+ ++ + +SWT++I+GL+QNG E A+ FR+M + + + FT S L C
Sbjct: 319 DDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGC 378
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L EEG+QIH + + + + GS L+D+Y KC A VF T++ +V+S
Sbjct: 379 SNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLN 438
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
M+ Y QNG EA+ +F M G++P+D T+ SV+ +C N +EEG +
Sbjct: 439 TMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD 498
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
++ +V G+ G +E++ L E+ D V W L+S K +
Sbjct: 499 KIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVEMAERIT 558
Query: 365 EKMLSHGLKP-DEVTLI 380
K+L ++P DE TLI
Sbjct: 559 RKILE--IEPGDEGTLI 573
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 233/648 (35%), Positives = 362/648 (55%), Gaps = 35/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P W +IS + G +A+ V+ M + + +++T +L + V
Sbjct: 262 VPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKM-EPNQVTMVGVLCACARLGRVKE 320
Query: 61 GRQIHGHILKFGFGSYV-FVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
GR +HG +++ + F+G L+++YA G + D + F+ + EK I
Sbjct: 321 GRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTI----------- 369
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+SW T+I+ +NG EA+ LF +M+ +GL D ++ S
Sbjct: 370 --------------------LSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLAS 409
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
L+ACG + + G QIH +II+ + ++ FV +AL+DMY KC + A +F + K+
Sbjct: 410 SLSACGTISFSQLGAQIHGYIIKTGNFND-FVQNALIDMYAKCGFVHSANKMFEKIKEKS 468
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+V+W +M+ G+ QNG S EA+ +F M N ++ D T SVI +C++L LE+G H
Sbjct: 469 LVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHH 528
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ ++ GL + AL Y KCG ++ +H +F+ M+ R VSW+ +++GY G+ N
Sbjct: 529 KLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINA 588
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
TI LF +ML G+KP+++T + +LSACS AG VE+G+ YF M E+G+ P HDH+ CM+
Sbjct: 589 TISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSM-SEFGVEPKHDHFACMV 647
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+LSRAG L A I +PFP ++ W LL+ CRIH ++I K ++LL++D +
Sbjct: 648 DLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTG 707
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
Y LLS+IYA +G WD ++R M+ KG+RK PG S I+ +++ F D S +
Sbjct: 708 YYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKD 767
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY LE + + Y + + + K + HSEKLAIAFG++ PG +R
Sbjct: 768 IYRFLENFRSLVHAQVYDSEPDNSIVGTSKFNKENNVVSHSEKLAIAFGIINTRPGTTLR 827
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ KNLRVC DCH+ K SKIT REI++RD RFH F+NG CSC D+W
Sbjct: 828 ISKNLRVCRDCHSFAKIASKITGREIIMRDLNRFHCFRNGSCSCNDYW 875
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/463 (26%), Positives = 240/463 (51%), Gaps = 40/463 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V+W+ ++ +G ++ + +++ M+ + + S +T ++ S + L
Sbjct: 161 MPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDS-VTMLSVTEACSELGSLRL 219
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +HG++++ S + + L+ MY KLG +Y A+R F+ +P + + MI+ +
Sbjct: 220 GRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQ 279
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G + EA+++F +M+ + +Q T V
Sbjct: 280 SGCFQ-------------------------------EALNVFAKMQEFKMEPNQVTMVGV 308
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNV-FVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
L AC L ++EG+ +H F+IR + F+G AL+++Y +++ VF T+ K
Sbjct: 309 LCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKT 368
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
++SW ++ + +NG EEA+ +F MQ G+ PD ++L S +S+C ++ + G Q HG
Sbjct: 369 ILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHG 428
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ TG + V NAL+ Y KCG + ++++F ++ + V+W +++ G+++ G + E
Sbjct: 429 YIIKTGNFNDF-VQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVE 487
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR--HYFEIMVKEYGIRPIHDHYTC 417
I LF++M + +K D++T + V+ ACS G +EKG+ H+ IM YG+R T
Sbjct: 488 AITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIM---YGLRKDSYLDTA 544
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
+ D+ S+ G L+ A ++M + W+ +++ +HG +
Sbjct: 545 LTDMYSKCGELQMAHGVFDRMS-ERSIVSWSVMIAGYGMHGQI 586
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/520 (25%), Positives = 237/520 (45%), Gaps = 50/520 (9%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P D W +LI + G +AV +Y+ M+ +S F ++L S + +G
Sbjct: 60 PKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVG 119
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
++HG ++K GF S V + L+ MY ++ + DA + FD +P +++V
Sbjct: 120 GKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVV------------ 167
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
+W++++ +QNG E +D+F +M E + D T SV
Sbjct: 168 -------------------AWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVT 208
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
AC L +L G+ +H +++R + + N + ++L+ MY K + AE +F + +
Sbjct: 209 EACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTA 268
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG-- 299
WT M+ Y Q+GC +EA+ +F MQ +EP+ T+ V+ +CA L ++EG HG
Sbjct: 269 PWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFV 328
Query: 300 -RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
R + + F+ AL+ Y GN+ D H++F + + +SW L+S + + G+
Sbjct: 329 IRRAMDPELDFL--GPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPE 386
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
E + LF +M + GL PD +L LSAC + G ++K + +
Sbjct: 387 EALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDFVQN--AL 444
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG----NVEIGKWAAESLLELD 474
ID+ ++ G + A K+ + W +++ +G + + + +++D
Sbjct: 445 IDMYAKCGFVHSANKMFEKIK-EKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMD 503
Query: 475 PYNPASYVLLSSI--YASKGKWDHVSQLRRTMREKGVRKD 512
S + S Y KGKW H + G+RKD
Sbjct: 504 KLTFLSVIQACSHLGYLEKGKWVH-----HKLIMYGLRKD 538
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 138/542 (25%), Positives = 240/542 (44%), Gaps = 79/542 (14%)
Query: 48 MLIMSSSRRCVDLGR--QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPE 105
+L M RRC Q+H H+ G + + L++ YA++G+
Sbjct: 2 ILYMPLFRRCATSTTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIF------------ 49
Query: 106 KNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM 165
E S+R+F DS W +I + G EA+ L+ EM
Sbjct: 50 -------------------ESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEM 90
Query: 166 RLEG-LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
+ + F F SVL AC G L G ++H +I+ + + V ++L+ MY +
Sbjct: 91 VYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSC 150
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A F TM ++VV+W+++++ + QNG + E + +F M +EPD T+ SV +
Sbjct: 151 LDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEA 210
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
C+ L SL G HG + + S +++N+L+ YGK G++ + RLF + R W
Sbjct: 211 CSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPW 270
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR--HYF--- 399
T ++S Y + G E +++F KM ++P++VT++GVL AC+R G V++GR H F
Sbjct: 271 TPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIR 330
Query: 400 ---------------EIMVKEYGIRPIHD-----------HYTCMIDILSRAGRLEEAKS 433
E+ +R H + +I I +R G+ EEA
Sbjct: 331 RAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALL 390
Query: 434 FINKMP---FPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYAS 490
+M PD+ A+ LS+C ++G +++ +N L +YA
Sbjct: 391 LFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDFVQNALIDMYAK 450
Query: 491 KGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS---PYSDQIYAELEKL 547
G +++ ++EK S + + S + FS + +S DQ+Y K+
Sbjct: 451 CGFVHSANKMFEKIKEK--------SLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKM 502
Query: 548 NR 549
++
Sbjct: 503 DK 504
>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Brachypodium distachyon]
Length = 707
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 244/679 (35%), Positives = 360/679 (53%), Gaps = 68/679 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRC--- 57
MP + VSW L+ G HG + +++ M +LS + + + +S + C
Sbjct: 65 MPERNVVSWTALMVGFLRHGDARECLRLLGAMR-----SLSDVAPNEFTLSASLKACGVV 119
Query: 58 --VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
+ G IHG ++ GF + V + LV +Y+K G I DA
Sbjct: 120 GDMAAGVWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDA------------------- 160
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL-----EGL 170
RR+F G ++ ++W MI+G G R+++ +FREM+ E
Sbjct: 161 ------------RRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEEEDH 208
Query: 171 AMDQFTFGSVLTACGGLLALEEGKQIHA-FIIRN-DHKDNVFVGSALVDMYCKCKSI-KY 227
D+FTF S+L ACG L A EG Q+HA +IR N + AL+DMY KC+ +
Sbjct: 209 QPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCLLPM 268
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN 287
A VF + KN + WT ++VG+ Q G +EA+++F +G+ D L SV+ A+
Sbjct: 269 AMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFAD 328
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
A +E+G Q H ++ T ++V+N+L+ Y KCG +++ R F E+ R+ VSWTA+
Sbjct: 329 FALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAM 388
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYG 407
++G K G E I +FE+M + G++PDEV + +LSACS +GLVE+ R YF + +
Sbjct: 389 INGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVEECRRYFSAIRHDRR 448
Query: 408 IRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAA 467
+RP +HY CM+D+L RAG L EAK + MP P W TLLS+CR+H NV +G+ A
Sbjct: 449 LRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAPTVGVWQTLLSACRVHKNVTVGREAG 508
Query: 468 ESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF 527
E+LL +D NP +YV+LS+I+A G W ++R MR +G+RK GCSW++ H F
Sbjct: 509 ETLLAIDGDNPVNYVMLSNIFAEAGDWRECQRVRGAMRRRGLRKQGGCSWVEVGKEAHFF 568
Query: 528 -SADDWSSPYSDQIYAELEKLNRKMIKE-GYVPD-----MSSVLHDVELSEKIKMLNHHS 580
D S P + I L + R M + GY P + LHDV+ + + L HS
Sbjct: 569 YGGGDDSHPRAADICCVLRDVERTMRERLGYSPGSSSSSSEAALHDVDEESRAESLRAHS 628
Query: 581 EKLAIAFGLLF------------IPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVR 628
E+LA+ LL IRV KNLRVC DCH K +S + R ++VR
Sbjct: 629 ERLAVGLWLLLHHDHDHGEGMGGTKRKEVIRVYKNLRVCGDCHEFFKGLSSVVGRVLVVR 688
Query: 629 DAVRFHLFKNGECSCGDFW 647
DA RFH F++G CSC D+W
Sbjct: 689 DANRFHRFEDGVCSCKDYW 707
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 126/458 (27%), Positives = 215/458 (46%), Gaps = 48/458 (10%)
Query: 42 RITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFD 101
R + ML S++ + G Q+HG +LK GFGS +G+ L+DMYAK G + A F
Sbjct: 4 RKMIADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFG 63
Query: 102 ELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDL 161
+PE+N+V + ++ G LR G E RL M+
Sbjct: 64 GMPERNVVSWTALMVGFLRHGDARECLRLLGAMRS------------------------- 98
Query: 162 FREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK 221
L +A ++FT + L ACG + + G IH +R + + V ++LV +Y K
Sbjct: 99 -----LSDVAPNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEGHHVVANSLVLLYSK 153
Query: 222 CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE-----PDDF 276
I A VF ++N+V+W AM+ GY G +++ +F MQ+ E PD+F
Sbjct: 154 GGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEF 213
Query: 277 TLGSVISSCANLASLEEGTQFHGRSLVTGL--ISFITVSNALVTFYGKCGN-IEDSHRLF 333
T S++ +C +L + EG Q H ++ G+ S ++ AL+ Y KC + + ++F
Sbjct: 214 TFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCLLPMAMQVF 273
Query: 334 NEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVE 393
N + ++ + WT ++ G+A+ G+ E ++LF + S G++ D L V+ + LVE
Sbjct: 274 NRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVE 333
Query: 394 KGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+GR VK + +ID+ + G +EA ++P + + W +++
Sbjct: 334 QGRQVHCYTVKTPAGLDV-SVANSLIDMYHKCGLTDEAARRFREVP-ARNVVSWTAMING 391
Query: 454 CRIHGNVEIGKWAAESLLEL-----DPYNPASYVLLSS 486
HG+ G+ A E+ +P A LLS+
Sbjct: 392 LGKHGH---GQEAIHMFEEMRAEGVEPDEVAYLALLSA 426
>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
Length = 771
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 243/678 (35%), Positives = 384/678 (56%), Gaps = 36/678 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLM-----------LKDGLGNLSRITFSTML 49
MP D +WN++I+ +A ++DA ++++ M L G R+ ++ L
Sbjct: 99 MPGFDAFTWNIMIAAYARINRLDDARELFHGMISGRDVVSWAILVAGYARHDRLEEASAL 158
Query: 50 I----MSSSRRCVDL--GRQIHGHILKF--------GFGSY-VFVGSPLVDMYAKLGLIY 94
+ + C + G +GH+ + G G + ++ Y K +
Sbjct: 159 FRRMPLWDTVTCTSVLQGYAHNGHLAEAQELFDRIGGAGDRDATACNAMIAAYGKNARVD 218
Query: 95 DAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGL 154
A+ F ++ +N ++ ++ + G ++ +++ F M +DSI++T M L G
Sbjct: 219 LAEGLFAQIKLRNAASWSLLLLTYAQNGHLDLAKKSFDRMPQRDSIAFTAMTAVLSDQGE 278
Query: 155 EREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSA 214
R A ++ R + A+D + ++L L+E +++ + + V G+
Sbjct: 279 LRGAREMLRYLS----AVDVIAWNALLEGYSRTGDLDEVRRLFSAMEHRTVATTVVAGT- 333
Query: 215 LVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD 274
LV++Y KC + A V M + VSWTAM+ Y QNG + EA+ +F M G EP
Sbjct: 334 LVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPS 393
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS-FITVSNALVTFYGKCGNIEDSHRLF 333
D TL SV+ SCA L +L G + H R + L S + + NA++T YGKCGN+E + +F
Sbjct: 394 DITLISVVDSCAVLGTLSLGKRIHARIRSSPLFSQSLMLLNAVITMYGKCGNLELAREVF 453
Query: 334 NE--MNVRDEVSWTALVSGYAKFGKANETIDLFEKM-LSHGLKPDEVTLIGVLSACSRAG 390
+ R V+WTA++ YA+ G E I+LF++M + G +P+ VT + VLSACS G
Sbjct: 454 ESVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMVIDGGTEPNRVTFLSVLSACSHLG 513
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEA-KSFINKMPFPPDAIGWAT 449
+E+ +F M ++G+ P DHY C++D+L RAGRL EA K + F D + W
Sbjct: 514 QLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIA 573
Query: 450 LLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
LS+C+++G++E + AA+ + EL+P N A VLLS++YA+KG+ V+++R M+ GV
Sbjct: 574 FLSACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGV 633
Query: 510 RKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVEL 569
+K G SWI+ +RVH F D S P +IY+ELE+L+R++ + GYVPD VL DV+
Sbjct: 634 KKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYSELERLHREIKEAGYVPDTKMVLRDVDE 693
Query: 570 SEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRD 629
+K ++L +HSE+LA+A G++ PPG +RVVKNLRVCSDCH ATK+IS+I R+I+VRD
Sbjct: 694 EKKAQLLGYHSERLAMALGIISTPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRD 753
Query: 630 AVRFHLFKNGECSCGDFW 647
RFH FK+G CSCGD+W
Sbjct: 754 TSRFHHFKDGVCSCGDYW 771
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 144/540 (26%), Positives = 231/540 (42%), Gaps = 87/540 (16%)
Query: 81 SPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGM-KDKDS 139
S ++ Y I+DA+ FD +P + +N MI R ++++R LF GM +D
Sbjct: 77 SCIIQAYVSSSRIHDARALFDSMPGFDAFTWNIMIAAYARINRLDDARELFHGMISGRDV 136
Query: 140 ISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAF 199
+SW ++ G ++ EA LFR M L D T SVL L E +++
Sbjct: 137 VSWAILVAGYARHDRLEEASALFRRMPL----WDTVTCTSVLQGYAHNGHLAEAQELFDR 192
Query: 200 IIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEA 259
I +D +A++ Y K + AE +F + +N SW+ +L+ Y QNG + A
Sbjct: 193 IGGAGDRDAT-ACNAMIAAYGKNARVDLAEGLFAQIKLRNAASWSLLLLTYAQNGHLDLA 251
Query: 260 VKIFCNM-QRNGIEPDDFT-LGSVISSCANLA------------------SLEEGTQFHG 299
K F M QR+ I FT + +V+S L +L EG G
Sbjct: 252 KKSFDRMPQRDSIA---FTAMTAVLSDQGELRGAREMLRYLSAVDVIAWNALLEGYSRTG 308
Query: 300 -----RSLVTGL----ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
R L + + ++ V+ LV YGKCG ++D+ R+ + M VR VSWTA+++
Sbjct: 309 DLDEVRRLFSAMEHRTVATTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAA 368
Query: 351 YAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH------------- 397
YA+ G A E I+LF+ M G +P ++TLI V+ +C+ G + G+
Sbjct: 369 YAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPLFSQ 428
Query: 398 ---YFEIMVKEYG-------IRPIHDH----------YTCMIDILSRAGRLEEAKSFINK 437
++ YG R + + +T MI ++ G EEA +
Sbjct: 429 SLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQE 488
Query: 438 MPF----PPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP---YNPAS--YVLLSSIY 488
M P+ + + ++LS+C G +E A E + P PA Y L +
Sbjct: 489 MVIDGGTEPNRVTFLSVLSACSHLGQLE---QAWEHFCSMGPDFGVPPAGDHYCCLVDLL 545
Query: 489 ASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLN 548
G+ +L +R K D C WI + S + + D S + + +ELE N
Sbjct: 546 GRAGRLGEAEKL--LLRHKDFEADVVC-WIAFLSACQM-NGDLERSQRAAKRVSELEPEN 601
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 151/335 (45%), Gaps = 21/335 (6%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
F + AC L E K +H I R+ H DN + + L+D++ KC A +VF +
Sbjct: 10 FEERIRACAIGRKLHEAKILHDEIARSPHGDNRRLTNLLIDLFGKCGDPDAARAVFNRVR 69
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
N SW+ ++ Y + +A +F +M G D FT +I++ A + L++ +
Sbjct: 70 LPNEYSWSCIIQAYVSSSRIHDARALFDSMP--GF--DAFTWNIMIAAYARINRLDDARE 125
Query: 297 -FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
FHG ++S+ LV Y + +E++ LF M + D V+ T+++ GYA G
Sbjct: 126 LFHGMISGRDVVSWAI----LVAGYARHDRLEEASALFRRMPLWDTVTCTSVLQGYAHNG 181
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF-EIMVKEYGIRPIHDH 414
E +LF+++ G + D +++A + V+ F +I ++
Sbjct: 182 HLAEAQELFDRIGGAGDR-DATACNAMIAAYGKNARVDLAEGLFAQIKLRNAA------S 234
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
++ ++ ++ G L+ AK ++MP D+I + + + G + + A E L L
Sbjct: 235 WSLLLLTYAQNGHLDLAKKSFDRMP-QRDSIAFTAMTAVLSDQGEL---RGAREMLRYLS 290
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
+ ++ L Y+ G D V +L M + V
Sbjct: 291 AVDVIAWNALLEGYSRTGDLDEVRRLFSAMEHRTV 325
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/652 (34%), Positives = 360/652 (55%), Gaps = 41/652 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRI-----TFSTMLIMSSSR 55
+P WN +I G++ + DA+ +Y+ M L+R+ TF +L
Sbjct: 79 LPRPQVFPWNAIIRGYSRNNHFQDALLMYSKM------QLARVSPDSFTFPHLLKACGGL 132
Query: 56 RCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
+ +GR +H + + GF + VFV + L+ +YAK + A+ F+ LP
Sbjct: 133 SHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLP----------- 181
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
+ ++ +SWT +++ QNG EA+++F +MR + D
Sbjct: 182 ------------------LPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCV 223
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
SVL A L LE+G+ IHA +++ + + +L MY KC + A+ +F M
Sbjct: 224 ALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKM 283
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
N++ W AM+ GY +NG +++A+ +F M + PD ++ S IS+CA + SLE+
Sbjct: 284 KSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQAR 343
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
+ + +S+AL+ + KCG++E + +F+ RD V W+A++ GY G
Sbjct: 344 WMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHG 403
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
+A E I L+ M G+ P++VT +G+L AC+ +G+V +G +F M ++ I P HY
Sbjct: 404 QAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMA-DHKINPQQQHY 462
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
C+ID+L RAG L++A I MP P W LLS+C+ H +VE+GK+AA+ L +DP
Sbjct: 463 ACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDP 522
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSP 535
N YV LS++YA+ WD V+++R M+EKG+ KD GCSW++ + R+ F D S P
Sbjct: 523 SNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHP 582
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
++I ++E + ++ + G+V + + LHD+ E + L HSE++ IA+GL+ P G
Sbjct: 583 RYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERITIAYGLISTPQG 642
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+R+ KNLR C +CH ATK ISK+ REI+VRD RFH FK+G CSCGD+W
Sbjct: 643 TTLRITKNLRACVNCHAATKLISKLVGREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 214/418 (51%), Gaps = 37/418 (8%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
+F LI SS+ + RQIH +L G F+ + L+ + G I A++ FD+L
Sbjct: 22 SFYASLIDSSTHKA--QLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDL 79
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
P + W +I G +N ++A+ ++
Sbjct: 80 PRPQV-------------------------------FPWNAIIRGYSRNNHFQDALLMYS 108
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
+M+L ++ D FTF +L ACGGL L+ G+ +HA + R + +VFV + L+ +Y KC+
Sbjct: 109 KMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCR 168
Query: 224 SIKYAESVFRTMAW--KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
+ A +VF + + +VSWTA++ Y QNG EA++IF M++ ++PD L SV
Sbjct: 169 RLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSV 228
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDE 341
+++ L LE+G H + GL + + +L T Y KCG + + LF++M +
Sbjct: 229 LNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNL 288
Query: 342 VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEI 401
+ W A++SGYAK G A + IDLF +M++ ++PD +++ +SAC++ G +E+ R + +
Sbjct: 289 ILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQAR-WMDE 347
Query: 402 MVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
V R + +ID+ ++ G +E A+S ++ D + W+ ++ +HG
Sbjct: 348 YVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRT-LDRDVVVWSAMIVGYGLHGQ 404
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/602 (36%), Positives = 349/602 (57%), Gaps = 32/602 (5%)
Query: 78 FVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDK 137
FV + L+ MY +LGL DA+R FDE+ K+ V + +I+GL + G++ +++ L +
Sbjct: 143 FVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVR 202
Query: 138 DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIH 197
D ISWT++I + REA+ F+ M G+A D+ T +VL+AC L LE G+ +H
Sbjct: 203 DVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLH 262
Query: 198 AFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF-------RTMAW------------- 237
+ + + AL+DMY KC +A+ VF R +W
Sbjct: 263 LLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHV 322
Query: 238 ------------KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
++++++ +M+ GY +G EA+ +F +M+R+ + D+FT+ +++++C
Sbjct: 323 DVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTAC 382
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
A+L +L++G H + + I + AL+ Y KCG ++++ +F M RD +WT
Sbjct: 383 ASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWT 442
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE 405
A+++G A G ++ F +M G +P+ V+ I VL+ACS + L+ +GR YF+ M
Sbjct: 443 AMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRIL 502
Query: 406 YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKW 465
Y I P +HY CMID+L R+G L+EA + MP P+A+ WA++LS+CR+H ++++ +
Sbjct: 503 YNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQC 562
Query: 466 AAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVH 525
AAE LL+L+P YV L +IY +W++ S++R M E+ V+K G S I +VH
Sbjct: 563 AAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSSITVAGQVH 622
Query: 526 IFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAI 585
F D S P +I A LE+++ ++ GY P S + DV+ EK + L HSEKLAI
Sbjct: 623 KFVVSDKSHPRILEIIAMLEEISHRLKSLGYSPLTSQITVDVDEEEKEQALLAHSEKLAI 682
Query: 586 AFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGD 645
AFGL+ + P LP+ + KNLRVC DCH+A K IS++ REI+VRD RFH F+ G CSC D
Sbjct: 683 AFGLINLAPNLPVHIRKNLRVCEDCHSAIKLISRLWNREIIVRDRSRFHHFREGTCSCND 742
Query: 646 FW 647
FW
Sbjct: 743 FW 744
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 207/410 (50%), Gaps = 45/410 (10%)
Query: 5 DGVSWNLLISGHASHGSVND-------------------------------AVKVYNLML 33
D V+W +LISG A G + D AV + ML
Sbjct: 172 DAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTML 231
Query: 34 KDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLI 93
G+ +T +L + + ++LGR +H + + G + + L+DMYAK G
Sbjct: 232 SHGIAP-DEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDF 290
Query: 94 YDAKRGFDEL---PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLM 150
A++ FD L P +N +I G + G V+ +R LF M+ +D I++ +M+TG +
Sbjct: 291 GHAQQVFDALGRGPRPQ--SWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYI 348
Query: 151 QNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVF 210
+G REA+ LF MR L +D FT ++LTAC L AL++G+ +HA I + + +++
Sbjct: 349 HSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIY 408
Query: 211 VGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
+G+AL+DMY KC + A VF+ M ++V +WTAM+ G NG + A++ F M+ +G
Sbjct: 409 LGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDG 468
Query: 271 IEPDDFTLGSVISSCANLASLEEG-TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
+P+ + +V+++C++ L EG F ++ + I ++ G+ G ++++
Sbjct: 469 FQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEA 528
Query: 330 HRLFNEMNVR-DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLK--PDE 376
L M ++ + V W +++S + ++ IDL + H LK PDE
Sbjct: 529 MDLVKTMPIQPNAVIWASILSA----CRVHKHIDLAQCAAEHLLKLEPDE 574
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 171/399 (42%), Gaps = 76/399 (19%)
Query: 161 LFREMRLEGLAMDQFTFGSVLTACGGLL----ALEEGKQIHAFIIRNDHKDNV-FVGSAL 215
LFR MR G+ D FTF L C +L +HA +R FV ++L
Sbjct: 90 LFRRMRRAGVRPDGFTF-HFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSL 148
Query: 216 VDMYCKCKSIKYAESVF------RTMAW-------------------------KNVVSWT 244
+ MY + A F +AW ++V+SWT
Sbjct: 149 IHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWT 208
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH------ 298
+++ Y + + EAV F M +GI PD+ T+ +V+S+CA L LE G H
Sbjct: 209 SLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEK 268
Query: 299 ----GRSLVTGLISFITVS----------------------NALVTFYGKCGNIEDSHRL 332
+LV LI NA++ Y K G+++ + L
Sbjct: 269 GMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSL 328
Query: 333 FNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLV 392
F+EM VRD +++ ++++GY G+ E + LF M H L+ D T++ +L+AC+ G +
Sbjct: 329 FDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGAL 388
Query: 393 EKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
++GR + + I+ T ++D+ + GR++EA +M D W +++
Sbjct: 389 QQGRALHACIEQRLVEADIYLG-TALLDMYMKCGRVDEATIVFQRMG-KRDVHTWTAMIA 446
Query: 453 SCRIHGNVEIGKWAAESLLEL--DPYNPASYVLLSSIYA 489
+G +GK A E ++ D + P S ++ + A
Sbjct: 447 GLAFNG---MGKAALEHFYQMRCDGFQPNSVSYIAVLTA 482
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 110/250 (44%), Gaps = 36/250 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +++N +++G+ G + +A+ ++ M + L + T +L +S +
Sbjct: 332 MEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDL-RVDNFTVVNLLTACASLGALQQ 390
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +H I + + +++G+ L+DMY K G + +A F + ++++ + M
Sbjct: 391 GRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAM------ 444
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
I GL NG+ + A++ F +MR +G + ++ +V
Sbjct: 445 -------------------------IAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAV 479
Query: 181 LTACGGLLALEEGKQI--HAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
LTAC L EG+ I+ N H G ++D+ + + A + +TM +
Sbjct: 480 LTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYG-CMIDLLGRSGLLDEAMDLVKTMPIQ 538
Query: 239 -NVVSWTAML 247
N V W ++L
Sbjct: 539 PNAVIWASIL 548
>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
Length = 1084
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/602 (36%), Positives = 349/602 (57%), Gaps = 60/602 (9%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNL--SRITFSTMLIMSSSRRCVDLGRQI 64
V WNL++ + G +ND K + L + + ++ T+ +L + +DLG QI
Sbjct: 311 VLWNLIL---VAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQI 367
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +K GF S ++V L+DMY+K G +
Sbjct: 368 HSLSVKTGFESDMYVSGVLIDMYSKYGWL------------------------------- 396
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
E++RR+ +K+KD +SWT+MI G +Q+ ++A+ F+EM+ G+ D S ++ C
Sbjct: 397 EKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGC 456
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G+ A+ +G QIHA + + + +V + +ALV++Y +C I+ A S F + K+ ++W
Sbjct: 457 AGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWN 516
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++ G+ Q+G EEA+K+F M ++G++ + FT S +S+ ANLA +++G Q H R + T
Sbjct: 517 GLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKT 576
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G V NAL++ YGKCG+ ED+ F+EM+ R+EVSW +++ ++ G+ E +D F
Sbjct: 577 GHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFF 636
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
++M GL YF+ M +YGIRP DHY C+IDI R
Sbjct: 637 DQMKKEGLS------------------------YFKSMSDKYGIRPRPDHYACVIDIFGR 672
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG+L+ AK F+ +MP DA+ W TLLS+C++H N+E+G+ AA+ LLEL+P++ ASYVLL
Sbjct: 673 AGQLDRAKKFVEEMPIAADAMVWRTLLSACKVHKNIEVGELAAKHLLELEPHDSASYVLL 732
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S+ YA GKW + Q+R+ MR++GVRK+PG SWI+ K+ VH F D P ++QIY L
Sbjct: 733 SNAYAVTGKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFL 792
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
+N ++ K GY + + HD E + HSEKLA+ FGL+ +PP +P+RV+KNL
Sbjct: 793 AVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNL 852
Query: 605 RV 606
RV
Sbjct: 853 RV 854
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 231/458 (50%), Gaps = 34/458 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V++N LISGHA A++++ M GL + +T S++L +S +
Sbjct: 204 MPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGL-SPDCVTISSLLAACASLGDLQK 262
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+H ++ K G S + L+D+Y K G + A F+ N+V++N ++
Sbjct: 263 GTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAF-- 320
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G + + + F +LF +M+ G+ +QFT+ +
Sbjct: 321 -GQINDLAKSF----------------------------ELFCQMQTAGIRPNQFTYPCI 351
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C ++ G+QIH+ ++ + +++V L+DMY K ++ A V + K+V
Sbjct: 352 LRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDV 411
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWT+M+ GY Q+ ++A+ F MQ+ GI PD+ L S IS CA + ++ +G Q H R
Sbjct: 412 VSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHAR 471
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
V+G +++ NALV Y +CG I ++ F E+ +DE++W LVSG+A+ G E
Sbjct: 472 VYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEA 531
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ +F +M G+K + T + LSA + +++G+ ++K G + +I
Sbjct: 532 LKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKT-GHSFETEVGNALIS 590
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ + G E+AK ++M + + W T+++SC HG
Sbjct: 591 LYGKCGSFEDAKMEFSEMS-ERNEVSWNTIITSCSQHG 627
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 126/453 (27%), Positives = 217/453 (47%), Gaps = 44/453 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW ++SG+A +G +A+ +Y M + G+ + S++L + GR +
Sbjct: 107 DNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPTPYV-LSSVLSSCTKAELFAQGRSV 165
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H K GF S FVG+ L+ +Y LR G
Sbjct: 166 HAQGYKQGFCSETFVGNALITLY-------------------------------LRCGSF 194
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ R+F M +D++++ T+I+G Q A+++F EM+ GL+ D T S+L AC
Sbjct: 195 RLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAAC 254
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L L++G Q+H+++ + + + +L+D+Y KC ++ A +F NVV W
Sbjct: 255 ASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWN 314
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
+LV +GQ ++ ++FC MQ GI P+ FT ++ +C ++ G Q H S+ T
Sbjct: 315 LILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKT 374
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G S + VS L+ Y K G +E + R+ + +D VSWT++++GY + + + F
Sbjct: 375 GFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAF 434
Query: 365 EKMLSHGLKPDEVTLIGVLSACS-----RAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
++M G+ PD + L +S C+ R GL R Y + I + ++
Sbjct: 435 KEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSI------WNALV 488
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
++ +R GR+ EA S ++ D I W L+S
Sbjct: 489 NLYARCGRIREAFSSFEEIEH-KDEITWNGLVS 520
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/439 (28%), Positives = 216/439 (49%), Gaps = 50/439 (11%)
Query: 24 DAVKVYNLMLKDGL--GNLSRITFSTMLIMSSSRRCVDLGR------QIHGHILKFGFGS 75
D KV +L G L + F+ L R C GR +IH + G G
Sbjct: 21 DPAKVLSLFADKARQHGGLGPLDFACAL-----RACRGNGRRWQVVPEIHAKAITRGLGK 75
Query: 76 YVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMK 135
VG+ L+D+Y+K GL+ LP +RR+F +
Sbjct: 76 DRIVGNLLIDLYSKNGLV---------LP----------------------ARRVFEELS 104
Query: 136 DKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQ 195
+D++SW M++G QNGL EA+ L+R+M G+ + SVL++C +G+
Sbjct: 105 ARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRS 164
Query: 196 IHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGC 255
+HA + FVG+AL+ +Y +C S + AE VF M ++ V++ ++ G+ Q
Sbjct: 165 VHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAH 224
Query: 256 SEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNA 315
E A++IF MQ +G+ PD T+ S++++CA+L L++GTQ H G+ S + +
Sbjct: 225 GEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGS 284
Query: 316 LVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPD 375
L+ Y KCG++E + +FN N + V W ++ + + ++ +LF +M + G++P+
Sbjct: 285 LLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPN 344
Query: 376 EVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT--CMIDILSRAGRLEEAKS 433
+ T +L C+ G ++ G + VK G D Y +ID+ S+ G LE+A+
Sbjct: 345 QFTYPCILRTCTCTGEIDLGEQIHSLSVKT-GFES--DMYVSGVLIDMYSKYGWLEKARR 401
Query: 434 FINKMPFPPDAIGWATLLS 452
+ +M D + W ++++
Sbjct: 402 VL-EMLKEKDVVSWTSMIA 419
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 149/299 (49%), Gaps = 4/299 (1%)
Query: 139 SISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC-GGLLALEEGKQIH 197
S+ W+ + G + + + LF + + + F L AC G + +IH
Sbjct: 8 SLGWS--LAGFLAQEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIH 65
Query: 198 AFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSE 257
A I + VG+ L+D+Y K + A VF ++ ++ VSW AML GY QNG E
Sbjct: 66 AKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGE 125
Query: 258 EAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALV 317
EA+ ++ M R G+ P + L SV+SSC +G H + G S V NAL+
Sbjct: 126 EALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALI 185
Query: 318 TFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEV 377
T Y +CG+ + R+F +M RD V++ L+SG+A+ +++FE+M S GL PD V
Sbjct: 186 TLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCV 245
Query: 378 TLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFIN 436
T+ +L+AC+ G ++KG + K G+ + ++D+ + G +E A N
Sbjct: 246 TISSLLAACASLGDLQKGTQLHSYLFKA-GMSSDYIMEGSLLDLYVKCGDVETALVIFN 303
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/620 (36%), Positives = 359/620 (57%), Gaps = 45/620 (7%)
Query: 41 SRITFSTMLIMSSSRRCVDLGR--QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKR 98
+R+T T+L + +S C L + QIH ILK G + + + + L I+ A
Sbjct: 13 TRLTEQTILTLLNSH-CNTLSKLTQIHAFILKTGLQNNPLILTKFTSTSSNLNSIHYATS 71
Query: 99 GF--------DELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLM 150
P + ++NT+I R + +D S S+
Sbjct: 72 FLFPPSHTTSTPTPSYDAFLFNTLI-------------RAYSQTRDSKSNSFL------- 111
Query: 151 QNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVF 210
+R M G+ ++FTF VL C G+ +L GK +H +++ +++V
Sbjct: 112 ----------FYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCVHGCVVKFGFEEDVH 161
Query: 211 VGSALVDMYCKC---KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQ 267
V + L+ MYC C ++AE VF + V+W+AM+ G+ + GCS AV +F MQ
Sbjct: 162 VLNTLIHMYC-CLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQ 220
Query: 268 RNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIE 327
G+ PD+ T+ SV+S+CA+L +LE G + + + NAL+ + KCGN++
Sbjct: 221 VMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVELCNALIDMFAKCGNVD 280
Query: 328 DSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS 387
+ +LF +M+ R VSWT++++G A G+ + + LF++M+ +G+ PD+V IGVLSACS
Sbjct: 281 KAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACS 340
Query: 388 RAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGW 447
+GLV+KGR+YF M + + I P +HY CM+D+L R G ++EA F+ KMPF P+ I W
Sbjct: 341 HSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEPNQIIW 400
Query: 448 ATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREK 507
T++++C G +++G+ ++ L++ +P + ++YVLLS+IYA +W+ +++R M +
Sbjct: 401 RTIITACHATGELKLGESISKELIKSEPMHESNYVLLSNIYAKLRQWEKKTKVREMMDMR 460
Query: 508 GVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDV 567
G++K PG + I+ + ++ F A D S +IY ++++ R++ K GYVP S VL D+
Sbjct: 461 GMKKVPGSTMIEVNNEMYEFVAGDKSHDQYKEIYEMVDEMGREIKKAGYVPTTSQVLLDI 520
Query: 568 ELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILV 627
+ +K L HSEKLAIAF LL PPG IR+VKNLRVC DCH+ATK+ISK+ REI+V
Sbjct: 521 DEEDKEDALYRHSEKLAIAFALLNTPPGTSIRIVKNLRVCEDCHSATKFISKVYNREIVV 580
Query: 628 RDAVRFHLFKNGECSCGDFW 647
RD RFH FKNG CSC DFW
Sbjct: 581 RDRNRFHHFKNGLCSCRDFW 600
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 110/255 (43%), Gaps = 34/255 (13%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P D V+W+ +I+G G + AV ++ M G+ IT ++L + ++LG
Sbjct: 189 PKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCP-DEITMVSVLSACADLGALELG 247
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+ + ++ K V + + L+DM+AK G
Sbjct: 248 KWVESYVEKKNIPKSVELCNALIDMFAKCGN----------------------------- 278
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
V+++ +LFR M + +SWT++I GL +G +A+ LF EM G+ D F VL
Sbjct: 279 --VDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVL 336
Query: 182 TACGGLLALEEGKQIHAFIIRN-DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK-N 239
+AC +++G+ + RN V +VD+ C+ +K A + M ++ N
Sbjct: 337 SACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEPN 396
Query: 240 VVSWTAMLVGYGQNG 254
+ W ++ G
Sbjct: 397 QIIWRTIITACHATG 411
>gi|356555295|ref|XP_003545969.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Glycine max]
Length = 626
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/537 (38%), Positives = 332/537 (61%), Gaps = 1/537 (0%)
Query: 112 NTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GL 170
+ +++ L G ++++LF M KDSISW ++++G + G + +F MR E
Sbjct: 90 DQLVSCYLNMGSTPDAQKLFDEMPHKDSISWNSLVSGFSRIGDLGNCLRVFYTMRYEMAF 149
Query: 171 AMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAES 230
++ T SV++AC A +EG +H ++ + V V +A ++MY K + A
Sbjct: 150 EWNELTLLSVISACAFAKARDEGWCLHCCAVKLGMELEVKVVNAFINMYGKFGCVDSAFK 209
Query: 231 VFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS 290
+F + +N+VSW +ML + QNG EAV F M+ NG+ PD+ T+ S++ +C L
Sbjct: 210 LFWALPEQNMVSWNSMLAVWTQNGIPNEAVNYFNMMRVNGLFPDEATILSLLQACEKLPL 269
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
HG GL IT++ L+ Y K G + SH++F E++ D+V+ TA+++G
Sbjct: 270 GRLVEAIHGVIFTCGLNENITIATTLLNLYSKLGRLNVSHKVFAEISKPDKVALTAMLAG 329
Query: 351 YAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP 410
YA G E I+ F+ + G+KPD VT +LSACS +GLV G++YF+IM Y ++P
Sbjct: 330 YAMHGHGKEAIEFFKWTVREGMKPDHVTFTHLLSACSHSGLVMDGKYYFQIMSDFYRVQP 389
Query: 411 IHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL 470
DHY+CM+D+L R G L +A I MP P++ W LL +CR++ N+ +GK AAE+L
Sbjct: 390 QLDHYSCMVDLLGRCGMLNDAYRLIKSMPLEPNSGVWGALLGACRVYRNINLGKEAAENL 449
Query: 471 LELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSAD 530
+ L+P +P +Y++LS+IY++ G W S++R M+ K ++ GCS+I++ +++H F D
Sbjct: 450 IALNPSDPRNYIMLSNIYSAAGLWSDASKVRALMKTKVFIRNAGCSFIEHGNKIHRFVVD 509
Query: 531 DWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLL 590
D+S P SD+I+ +LE++ RK+ + G+V + S+LHDV+ K M+N HSEK+A+AFGLL
Sbjct: 510 DYSHPDSDKIHRKLEEIMRKIKEVGFVSETESILHDVDEEVKTDMINKHSEKIALAFGLL 569
Query: 591 FIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+P+ ++KNLR+C DCHN K++S I +R I++RD+ RFH F +G CSC D+W
Sbjct: 570 VSNADMPLVIIKNLRICLDCHNTAKFVSLIEKRTIIIRDSKRFHHFSDGLCSCADYW 626
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 185/417 (44%), Gaps = 46/417 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D +SWN L+SG + G + + ++V+ M + + +T +++ + + D
Sbjct: 112 MPHKDSISWNSLVSGFSRIGDLGNCLRVFYTMRYEMAFEWNELTLLSVISACAFAKARDE 171
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +H +K G V V + ++MY K G + A + F LPE+N+V +N+M+
Sbjct: 172 GWCLHCCAVKLGMELEVKVVNAFINMYGKFGCVDSAFKLFWALPEQNMVSWNSMLA---- 227
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
WT QNG+ EA++ F MR+ GL D+ T S+
Sbjct: 228 --------------------VWT-------QNGIPNEAVNYFNMMRVNGLFPDEATILSL 260
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L + IH I +N+ + + L+++Y K + + VF ++ +
Sbjct: 261 LQACEKLPLGRLVEAIHGVIFTCGLNENITIATTLLNLYSKLGRLNVSHKVFAEISKPDK 320
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+ TAML GY +G +EA++ F R G++PD T ++S+C++ G G+
Sbjct: 321 VALTAMLAGYAMHGHGKEAIEFFKWTVREGMKPDHVTFTHLLSACSH-----SGLVMDGK 375
Query: 301 SLVTGLISFITVS------NALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAK 353
+ F V + +V G+CG + D++RL M + W AL+
Sbjct: 376 YYFQIMSDFYRVQPQLDHYSCMVDLLGRCGMLNDAYRLIKSMPLEPNSGVWGALLGACRV 435
Query: 354 FGKANETIDLFEKMLSHGLKP-DEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
+ N + E +++ L P D I + + S AGL +M + IR
Sbjct: 436 YRNINLGKEAAENLIA--LNPSDPRNYIMLSNIYSAAGLWSDASKVRALMKTKVFIR 490
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 242/655 (36%), Positives = 356/655 (54%), Gaps = 77/655 (11%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL----------------- 103
G H ++LK G F+ + ++DMYAK G + A+ F+++
Sbjct: 114 GNMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWK 173
Query: 104 --------------PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGL 149
P +NI+ + +M+TG + G +E +RR F M ++ +SW M +
Sbjct: 174 SGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAY 233
Query: 150 MQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNV 209
Q +EA++LF +M EG+ D T+ +++C + I I + N
Sbjct: 234 AQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNS 293
Query: 210 FVGSALVDMYCKCKSIKYAESVF-------RTMAW------------------------- 237
FV +AL+DM+ K +++ A ++F + W
Sbjct: 294 FVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPK 353
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEG-- 294
++VVSW +M+ GY QNG S ++++F M I+PD+ T+ SV+S+C ++ +L+
Sbjct: 354 RDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYW 413
Query: 295 --TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
+++ G+ F N+L+ Y KCG++ D+HR+F M RD VS+ L+SG+A
Sbjct: 414 VLDIVREKNIKLGISGF----NSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFA 469
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
G E I L M G++PD VT IGVL+ACS AGL+ +G++ F+ + P
Sbjct: 470 ANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQA-----PTV 524
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLE 472
DHY CM+D+L RAG L+EAK I MP P A + +LL++ RIH V +G+ AA L E
Sbjct: 525 DHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFE 584
Query: 473 LDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDW 532
L+P N +YVLLS+IYAS G+W+ V ++R M++ G++K G SW++YK +VH F+ D
Sbjct: 585 LEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDR 644
Query: 533 SSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFI 592
S S IY L +L RKM + G+V D S L DVE EK +ML HSEKLAI F LL
Sbjct: 645 SHEQSKDIYKLLAELERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLIS 704
Query: 593 PPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G IRVVKNLR+C DCH A K ISK+ REI+VRD RFH F G CSC D+W
Sbjct: 705 EVGTTIRVVKNLRICLDCHTAIKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 185/440 (42%), Gaps = 105/440 (23%)
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
+F D+ ++ M+ + G + + LF+ L F + ++ LA
Sbjct: 56 IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIK-----LA 110
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA------------- 236
+ G HA++++ H D+ F+ +A++DMY K + A ++F MA
Sbjct: 111 GKSGNMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISG 170
Query: 237 -WK-----------------NVVSWTAMLVGYGQNG------------------------ 254
WK N+++WT+M+ GY + G
Sbjct: 171 CWKSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQ 230
Query: 255 -------CSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL------------------- 288
C +EA+ +F M GI PDD T ISSC+++
Sbjct: 231 SAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIV 290
Query: 289 -------ASLEEGTQFHGRSLVTGLISFI------TVSNALVTFYGKCGNIEDSHRLFNE 335
A L+ +F + + + N +++ Y + G + + LF+
Sbjct: 291 LNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDN 350
Query: 336 MNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS-HGLKPDEVTLIGVLSACSRAGLVEK 394
M RD VSW ++++GYA+ G++ +I+LF++M+S ++PDEVT+ VLSAC G ++
Sbjct: 351 MPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKL 410
Query: 395 GRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
+I V+E I+ + +I + S+ G + +A M D + + TL+S
Sbjct: 411 SYWVLDI-VREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMG-TRDVVSFNTLISGF 468
Query: 455 RIHGNVEIGKWAAESLLELD 474
+G+ GK A + +L ++
Sbjct: 469 AANGH---GKEAIKLVLTME 485
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 105/245 (42%), Gaps = 49/245 (20%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTML-------IMSS 53
MP D VSWN +I+G+A +G +++++ M+ +T +++L +
Sbjct: 351 MPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKL 410
Query: 54 SRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNT 113
S +D+ R+ + + GF S +F MY+K G + DA R F + +++V +NT
Sbjct: 411 SYWVLDIVREKNIKLGISGFNSLIF-------MYSKCGSVADAHRIFQTMGTRDVVSFNT 463
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
+I +G NG +EAI L M EG+ D
Sbjct: 464 LI-------------------------------SGFAANGHGKEAIKLVLTMEEEGIEPD 492
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
T+ VLTAC L EGK + ++ V + +VD+ + + A+ + +
Sbjct: 493 HVTYIGVLTACSHAGLLNEGKN----VFKSIQAPTVDHYACMVDLLGRAGELDEAKMLIQ 548
Query: 234 TMAWK 238
+M K
Sbjct: 549 SMPMK 553
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/647 (35%), Positives = 361/647 (55%), Gaps = 33/647 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D +SWN +I G AS+G + AV+++ M +G S S M S +
Sbjct: 45 MPQRDIISWNSIIGGCASNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSF-I 103
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +HG+ ++ G S +G+ L+DMY+ D +
Sbjct: 104 GGVVHGYSVRTGLISETSLGNALLDMYSNCS---DWR----------------------- 137
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ ++FR M+ K+ +SWT MIT + G + LF+EM LEG+ D F S
Sbjct: 138 -----STNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSA 192
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A G +L+ GK +H + IRN ++ + V +AL++MY KC ++ A +F + K+
Sbjct: 193 LDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDT 252
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SW ++ GY ++ + EA +F M + P+ T+ ++ + A+L+SLE G + H
Sbjct: 253 ISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSSLERGREMHAY 311
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ G + V+NALV Y KCG + + RLF+ + ++ +SWT +++GY G+ +
Sbjct: 312 AVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDA 371
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
I LFE+M G++PD + +L ACS +GL ++G +F M E+ I P HY CM+D
Sbjct: 372 IALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVD 431
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L G L+EA FI MP PD+ W +LL CRIH NV++ + AE + EL+P N
Sbjct: 432 LLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMVFELEPENTGY 491
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLL++IYA +W+ V +L+ + +G+R++ GCSWI+ + + HIF A++ + P +I
Sbjct: 492 YVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFAENRNHPQGMRI 551
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
L+ + R+M +EG+ P L + + + L HS KLA+AFG+L + G PIRV
Sbjct: 552 AEFLDDVARRMQEEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLSQGRPIRV 611
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KN RVCS CH A K+ISK+ REI++RD+ RFH F+ G CSC +W
Sbjct: 612 TKNSRVCSHCHEAAKFISKMCGREIILRDSNRFHHFEEGRCSCRGYW 658
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 200/402 (49%), Gaps = 42/402 (10%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +HG+++K+GFG+ V + L+ YAK I DA FDE+P+
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQ--------------- 47
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+D ISW ++I G NGL +A++LF M LEG +D T SV
Sbjct: 48 ----------------RDIISWNSIIGGCASNGLYDKAVELFVRMWLEGQELDSTTLLSV 91
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ AC G +H + +R +G+AL+DMY C + +FR M KNV
Sbjct: 92 MPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNV 151
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWTAM+ Y + G ++ +F M GI PD F + S + + A SL+ G HG
Sbjct: 152 VSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHGKSVHGY 211
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ G+ + V+NAL+ Y KCG +E++ +F+ + +D +SW L+ GY++ ANE
Sbjct: 212 AIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSNLANEA 271
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP--IHDHY--T 416
LF +ML L+P+ VT+ +L A + +E+GR + Y +R + D++
Sbjct: 272 FTLFNEMLLQ-LRPNAVTMACILPAAASLSSLERGRE-----MHAYAVRRGYLEDNFVAN 325
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
++D+ + G L A+ + M + I W +++ +HG
Sbjct: 326 ALVDMYVKCGALLLARRLFD-MLTNKNLISWTIMIAGYGMHG 366
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 154/317 (48%), Gaps = 9/317 (2%)
Query: 192 EGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYG 251
+G +H ++++ V +AL+ Y K I+ A VF M ++++SW +++ G
Sbjct: 2 DGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCA 61
Query: 252 QNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFIT 311
NG ++AV++F M G E D TL SV+ +C G HG S+ TGLIS +
Sbjct: 62 SNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETS 121
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG 371
+ NAL+ Y C + ++++F M ++ VSWTA+++ Y + G ++ LF++M G
Sbjct: 122 LGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEG 181
Query: 372 LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEA 431
++PD + L A + ++ G+ ++ GI + ++++ + G +EEA
Sbjct: 182 IRPDVFAITSALDAFAGNESLKHGKSVHGYAIRN-GIEEVLPVANALMEMYVKCGYMEEA 240
Query: 432 KSFINKMPFPPDAIGWATLLSS-CRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYAS 490
+ FI D I W TL+ R + E E LL+L P N + + AS
Sbjct: 241 R-FIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQLRP-NAVTMACILPAAAS 298
Query: 491 -----KGKWDHVSQLRR 502
+G+ H +RR
Sbjct: 299 LSSLERGREMHAYAVRR 315
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/678 (33%), Positives = 372/678 (54%), Gaps = 69/678 (10%)
Query: 7 VSWNLLISG-HASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIH 65
+ WN + +S GS++ ++V+ + G+ S + +S L + + LG +IH
Sbjct: 488 LKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEV-YSVALKTCTRVMDIWLGMEIH 546
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
G ++K GF V++ L++ Y + + A + F E+P
Sbjct: 547 GCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMP--------------------- 585
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
+ +++ W I +Q+ ++ ++LFR+M+ L + T VL A
Sbjct: 586 ----------NPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASI 635
Query: 186 GLLA-LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM------AWK 238
L L GK+ H +++RN +V+VG++L+DMY K S+ A++VF M AW
Sbjct: 636 SELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWN 695
Query: 239 NVVS-----------------------------WTAMLVGYGQNGCSEEAVKIFCNMQRN 269
++VS W M+ GY GC +EA+ F MQ+
Sbjct: 696 SLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQE 755
Query: 270 GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDS 329
G+ P+ ++ ++ +CA+L+ L++G + H S+ G I + V+ AL+ Y K +++++
Sbjct: 756 GVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNA 815
Query: 330 HRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
H++F + + SW ++ G+A FG E I +F +M G+ PD +T +LSAC +
Sbjct: 816 HKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNS 875
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
GL+ +G YF+ M+ +Y I P +HY CM+D+L RAG L+EA I+ MP PDA W
Sbjct: 876 GLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGA 935
Query: 450 LLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
LL SCRIH N++ + AA++L +L+P N A+Y+L+ ++Y+ +W+ + LR M GV
Sbjct: 936 LLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGV 995
Query: 510 RKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVEL 569
R SWI+ RVH+FS+D+ P + +IY EL +L +M K GYVPD++ V +++
Sbjct: 996 RNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDE 1055
Query: 570 SEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRD 629
EK K+L H+EKLAI +GL+ + G PIRV+KN R+CSDCH+A KYIS + RE+ +RD
Sbjct: 1056 VEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRD 1115
Query: 630 AVRFHLFKNGECSCGDFW 647
VRFH F+ G+CSC DFW
Sbjct: 1116 GVRFHHFREGKCSCNDFW 1133
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 7/166 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDG-LGNLSRITFSTMLIMSSSRRCVDLGRQ 63
D V+WN +ISG+A G +A+ + M ++G + N + IT +L +S + G++
Sbjct: 725 DLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASIT--CLLRACASLSLLQKGKE 782
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
IH ++ GF VFV + L+DMY+K + +A + F + K + +N MI G GL
Sbjct: 783 IHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGL 842
Query: 124 VEESRRLFRGMKD----KDSISWTTMITGLMQNGLEREAIDLFREM 165
+E+ +F M+ D+I++T +++ +GL E F M
Sbjct: 843 GKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSM 888
>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 928
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/643 (34%), Positives = 366/643 (56%), Gaps = 39/643 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D +SWN L++ + G DA+ + M+ G +++ +TF++ L + +
Sbjct: 305 MPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG-KSVNYVTFTSALAACFTPDFFEK 363
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +HG ++ G +G+ LV MY K+G +
Sbjct: 364 GRILHGLVVVSGLFYNQIIGNALVSMYGKIGEM--------------------------- 396
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
ESRR+ M +D ++W +I G ++ +A+ F+ MR+EG++ + T SV
Sbjct: 397 ----SESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSV 452
Query: 181 LTAC---GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
L+AC G LL E GK +HA+I+ + + V ++L+ MY KC + ++ +F +
Sbjct: 453 LSACLLPGDLL--ERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDN 510
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
+N+++W AML +G EE +K+ M+ G+ D F+ +S+ A LA LEEG Q
Sbjct: 511 RNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL 570
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
HG ++ G + NA Y KCG I + ++ R SW L+S + G
Sbjct: 571 HGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYF 630
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
E F +ML G+KP VT + +L+ACS GLV+KG Y++++ +++G+ P +H C
Sbjct: 631 EEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCIC 690
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
+ID+L R+GRL EA++FI+KMP P+ + W +LL+SC+IHGN++ G+ AAE+L +L+P +
Sbjct: 691 VIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPED 750
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
+ YVL S+++A+ G+W+ V +R+ M K ++K CSW+K K +V F D + P +
Sbjct: 751 DSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQT 810
Query: 538 DQIYAELEKLNRKMIKE-GYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGL 596
+IYA+LE + +K+IKE GYV D S L D + +K L +HSE+LA+A+ L+ P G
Sbjct: 811 MEIYAKLEDI-KKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGS 869
Query: 597 PIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNG 639
+R+ KNLR+CSDCH+ K++S++ R I++RD RFH F+ G
Sbjct: 870 TVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERG 912
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/466 (26%), Positives = 220/466 (47%), Gaps = 43/466 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLG----NLSRITFSTMLIMSSSRR 56
MP + VSW L+ G++ G + + +Y M +G+G ++S + S L+ S
Sbjct: 103 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDES-- 160
Query: 57 CVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMIT 116
LGRQI G ++K G E + + N++I+
Sbjct: 161 ---LGRQIIGQVVKSGL-------------------------------ESKLAVENSLIS 186
Query: 117 GLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
L G V+ + +F M ++D+ISW ++ QNG E+ +F MR ++ T
Sbjct: 187 MLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTT 246
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
++L+ G + + G+ IH +++ V V + L+ MY A VF+ M
Sbjct: 247 VSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 306
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
K+++SW +++ + +G S +A+ + C+M +G + T S +++C E+G
Sbjct: 307 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRI 366
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
HG +V+GL + NALV+ YGK G + +S R+ +M RD V+W AL+ GYA+
Sbjct: 367 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED 426
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG-LVEKGRHYFEIMVKEYGIRPIHDHY 415
++ + F+ M G+ + +T++ VLSAC G L+E+G+ +V G
Sbjct: 427 PDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA-GFESDEHVK 485
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+I + ++ G L ++ N + + I W +L++ HG+ E
Sbjct: 486 NSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGE 530
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 214/451 (47%), Gaps = 33/451 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSWN ++SG G + ++ + M G+ S + S + S
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+HG + K G S V+V + ++ +Y +Y
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYG----VY-------------------------- 90
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GLV SR++F M D++ +SWT+++ G G E ID+++ MR EG+ ++ + V
Sbjct: 91 -GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLV 149
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+++CG L G+QI ++++ + + V ++L+ M ++ YA +F M+ ++
Sbjct: 150 ISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDT 209
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SW ++ Y QNG EE+ +IF M+R E + T+ +++S ++ + G HG
Sbjct: 210 ISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGL 269
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ G S + V N L+ Y G +++ +F +M +D +SW +L++ + G++ +
Sbjct: 270 VVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDA 329
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ L M+S G + VT L+AC EKGR ++V G+ ++
Sbjct: 330 LGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVS-GLFYNQIIGNALVS 388
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
+ + G + E++ + +MP D + W L+
Sbjct: 389 MYGKIGEMSESRRVLLQMP-RRDVVAWNALI 418
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/573 (38%), Positives = 335/573 (58%), Gaps = 40/573 (6%)
Query: 115 ITGLLRRGLV-------EESRRLFRGMKDK--DSISWTTMITGLMQNGLEREAIDLFREM 165
I L R GLV ++++F+ ++ + ++ W + + L + +AI LF +
Sbjct: 60 ILPLTRVGLVCAFTPSFHYAQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRL 119
Query: 166 RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI 225
R + D FT SVL AC LL L G+ +H + + + N+++ + +V +Y C +
Sbjct: 120 RQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEM 179
Query: 226 KYAESVFRTMAWKNVV-------------------------------SWTAMLVGYGQNG 254
A +F M ++VV SWT+M+ GY Q G
Sbjct: 180 GEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCG 239
Query: 255 CSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSN 314
++EA+ +F M+ G++ ++ T+ +V+++CA+L +L+ G + H S G + +SN
Sbjct: 240 KAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISN 299
Query: 315 ALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKP 374
L+ Y KCG +E++ ++F EM R VSW+A++ G A G+A E + LF M G++P
Sbjct: 300 TLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEP 359
Query: 375 DEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSF 434
+ VT IG+L ACS GL+ +GR +F M ++YGI P +HY CM+D+LSRAG L EA F
Sbjct: 360 NGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEF 419
Query: 435 INKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKW 494
I MP P+ + W LL +CR+H NVE+ + A + LLELDP N YV+LS+IYA G+W
Sbjct: 420 ILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRW 479
Query: 495 DHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKE 554
+ +++R+ M+++ V+K PG S I VH F A + S P ++QI+ E+L +M +
Sbjct: 480 EDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLK 539
Query: 555 GYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNAT 614
GYVP+ S VL D+E EK+K ++ HSEKLA+ FGL+ P PIR++KNLR+C DCH+A
Sbjct: 540 GYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLRICEDCHSAF 599
Query: 615 KYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
K IS I REI+VRD RFH F + CSC D+W
Sbjct: 600 KLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 632
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 115/375 (30%), Positives = 207/375 (55%), Gaps = 13/375 (3%)
Query: 9 WNLLISGHASHGSVNDAVKV-YNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL--GRQIH 65
WN + A S DA+ + Y L D + TF+ ++ + +DL GR +H
Sbjct: 96 WNSCLKALAEGDSPIDAIMLFYRLRQYDVCPD----TFTCSSVLRACLNLLDLSNGRILH 151
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
G + K GF S +++ + +V +YA G + +A+ F+++P++++V +N MI L+++G E
Sbjct: 152 GVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHE 211
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
+ LF M +++ SWT+MI G +Q G +EAI LF +M G+ ++ T +VL AC
Sbjct: 212 GAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACA 271
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
L AL+ G +IH + R+ K NV + + L+DMY KC ++ A VF M + VVSW+A
Sbjct: 272 DLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSA 331
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR-SLVT 304
M+ G +G +EEA+++F +M + GIEP+ T ++ +C+++ + EG +F +
Sbjct: 332 MIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDY 391
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKANETIDL 363
G+I I +V + G + ++H M ++ + V W AL+ + ++ +++
Sbjct: 392 GIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGA----CRVHKNVEM 447
Query: 364 FEKMLSHGLKPDEVT 378
E+ + H L+ D +
Sbjct: 448 AEEAIKHLLELDPLN 462
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 13/242 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + SW +I+G+ G +A+ ++ M + G+ + +T +L + +DL
Sbjct: 220 MPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGV-KCNEVTVVAVLAACADLGALDL 278
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +IH + + GF V + + L+DMY K G + +A + F+E+ E+ +V ++ MI GL
Sbjct: 279 GMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAM 338
Query: 121 RGLVEESRRLFRGMK----DKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAMDQF 175
G EE+ RLF M + + +++ ++ GL E F M R G+
Sbjct: 339 HGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIE 398
Query: 176 TFGSV--LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
+G + L + GLL + H FI+ K N V AL+ K+++ AE +
Sbjct: 399 HYGCMVDLLSRAGLL-----HEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIK 453
Query: 234 TM 235
+
Sbjct: 454 HL 455
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 111/258 (43%), Gaps = 63/258 (24%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW+ +I G A HG +A+++++ M + G+ + +TF +L S + GR+
Sbjct: 327 VSWSAMIGGLAMHGRAEEALRLFSDMSQVGI-EPNGVTFIGLLHACSHMGLISEGRRFFA 385
Query: 67 HILK-FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-----------------EKNI 108
+ + +G + +VD+ ++ GL+++A +P KN+
Sbjct: 386 SMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNV 445
Query: 109 VMYNTMITGLL------------------RRGLVEESRRLFRGMKD---KDSISWTTM-I 146
M I LL G E++ R+ + MKD K + W+++ +
Sbjct: 446 EMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITV 505
Query: 147 TGLM-------QNGLEREAI-----DLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGK 194
G++ ++ + E I +L EMRL+G + SV+ LL +EEG+
Sbjct: 506 DGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNT----SVV-----LLDIEEGE 556
Query: 195 QIHAFIIRNDHKDNVFVG 212
++ F+ R+ K + G
Sbjct: 557 KV-KFVSRHSEKLALVFG 573
>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/592 (38%), Positives = 341/592 (57%), Gaps = 38/592 (6%)
Query: 62 RQIHGHIL--KFGFGSYVFVGSPLVDMYA--KLGLIYDAKRGFDELPEKNIVMYNTMITG 117
RQ+H HIL S+ F S +V A G I A+ F ++P NI
Sbjct: 5 RQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNI--------- 55
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQ-NGLEREAIDLFREMRLEGLAM-DQF 175
SW ++I G Q + L +E I LF+++ G + + F
Sbjct: 56 ----------------------FSWNSLIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSF 93
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
T VL AC + A EG Q+H+ ++++ ++FV ++LV+ Y KC+ I +A VF M
Sbjct: 94 TLAFVLKACAIVTAFGEGLQVHSHVLKDGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEM 153
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
+N+V+WTAM+ G+ + G +EA+++F MQ+ GI+PD TL SV+S+CA +L+ G
Sbjct: 154 PVRNLVAWTAMISGHARVGAVDEAMELFREMQKAGIQPDAMTLVSVVSACAVAGALDIGY 213
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
H +++ + +S ALV Y KCG IE + ++F M V+D +W++++ G+A G
Sbjct: 214 WLHAYIEKYFVLTDLELSTALVDMYAKCGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHG 273
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
A + ID F++ML + PD VT + VLSAC+ GLV +GR ++ +M+ E+GI P +HY
Sbjct: 274 LAQDAIDAFQQMLETEVTPDHVTFLAVLSACAHGGLVSRGRRFWSLML-EFGIEPSVEHY 332
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
C +D+L R+G +EEA M PP+A W +LL C+ + +G+ A LLEL+P
Sbjct: 333 GCKVDLLCRSGLVEEAYRITTTMKIPPNAATWRSLLMGCKKKKLLNLGEIVARYLLELEP 392
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSP 535
N +Y+++S++Y+S +W+ +S+LR+ M+EK ++ PGCS I+ VH F D S P
Sbjct: 393 LNAENYIMISNLYSSLSQWEKMSELRKVMKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHP 452
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
+ +E+++ ++ GY P +S VLH V EK L+ HSE+ AIA+GLL
Sbjct: 453 EVKMLREFMEEMSMRVRDSGYRPSISDVLHKVVDEEKECALSEHSERFAIAYGLLKTRAP 512
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ IRVVKNLRVC DCH K ISK+ +REI+VRD VRFH F G CSC DFW
Sbjct: 513 IVIRVVKNLRVCVDCHEVIKIISKLYEREIIVRDRVRFHKFIKGTCSCKDFW 564
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 177/355 (49%), Gaps = 33/355 (9%)
Query: 1 MPFHDGVSWNLLISGHAS-HGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
+P + SWN LI G++ H + + ++ + + G + T + +L +
Sbjct: 50 IPHPNIFSWNSLIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFG 109
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G Q+H H+LK GFGS +FV + LV+ Y K I A++ F+E+P +N+V + MI+G
Sbjct: 110 EGLQVHSHVLKDGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHA 169
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
R G V+E+ ++LFREM+ G+ D T S
Sbjct: 170 RVGAVDEA-------------------------------MELFREMQKAGIQPDAMTLVS 198
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
V++AC AL+ G +HA+I + ++ + +ALVDMY KC I+ A+ VF M K+
Sbjct: 199 VVSACAVAGALDIGYWLHAYIEKYFVLTDLELSTALVDMYAKCGCIERAKQVFVHMPVKD 258
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+W++M++G+ +G +++A+ F M + PD T +V+S+CA+ + G +F
Sbjct: 259 TTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAVLSACAHGGLVSRGRRFWS 318
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALVSGYAK 353
L G+ + V + G +E+++R+ M + + +W +L+ G K
Sbjct: 319 LMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRITTTMKIPPNAATWRSLLMGCKK 373
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 239/672 (35%), Positives = 363/672 (54%), Gaps = 64/672 (9%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW LI G+A +AV ++ M++ G+ S +T ++ + R +D+G ++
Sbjct: 198 VSWTSLICGYARGDRPKEAVSLFFEMVEAGI-RPSSVTMVCVISACAKLRDLDMGERVCA 256
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+I + G + + LVDMY K G ++
Sbjct: 257 YIGELGLKLNKVMVNALVDMYMKC-------------------------------GAIDA 285
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
++RLF D++ + + T+++ + GL REA+ + EM +G D+ T S ++A
Sbjct: 286 AKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQ 345
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L+ L GK H ++IRN + +G+ ++DMY KC + A VF M+ K VVSW ++
Sbjct: 346 LVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSL 405
Query: 247 LVGYGQNG-------------------------------CSEEAVKIFCNMQRNGIEPDD 275
G+ +NG E+A+++F MQ GI+ D
Sbjct: 406 TAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADR 465
Query: 276 FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNE 335
T+ + S+C L + E H G+ + ++ ALV + +CG+ + + ++FN+
Sbjct: 466 VTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNK 525
Query: 336 MNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG 395
M RD +WTA + A G LF +ML G+KPD V + VL+ACS G VE+G
Sbjct: 526 MTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQG 585
Query: 396 RHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCR 455
H F +M +++GI P +HY CM+D+L RAG L EA I MP P+ + W +LL++CR
Sbjct: 586 LHIFSLM-EDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACR 644
Query: 456 IHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGC 515
+H NVE+ +AAE + EL P +VLLS+IYAS GKW V+++R +REKGVRK PG
Sbjct: 645 VHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGS 704
Query: 516 SWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKM 575
S ++ +H F++ D S P I L+++N + G++PD+S+VL DV+ EK +
Sbjct: 705 SSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPDLSNVLLDVDEQEKEYL 764
Query: 576 LNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHL 635
L+ HSEKLAIAFGL+ +PIRVVKNLR+CSDCH+ K S I REI+VRD RFH
Sbjct: 765 LSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFAKMASIIYNREIIVRDNNRFHF 824
Query: 636 FKNGECSCGDFW 647
F+ G CSC D+W
Sbjct: 825 FRQGLCSCCDYW 836
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/483 (27%), Positives = 219/483 (45%), Gaps = 65/483 (13%)
Query: 10 NLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHIL 69
N LI G++S G +A+ +Y ML G+ + TF +L + G Q+HG ++
Sbjct: 100 NSLIRGYSSAGLGREAILLYVRMLVLGV-TPNHYTFPFVLSGCTKIAAFCEGIQVHGSVV 158
Query: 70 KFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRR 129
K G VF+ + L+ YA+ G + + +
Sbjct: 159 KMGLEEDVFIQNCLIHFYAECGHM-------------------------------DHGHK 187
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
+F GM +++ +SWT++I G + +EA+ LF EM G+ T V++AC L
Sbjct: 188 VFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRD 247
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
L+ G+++ A+I K N + +ALVDMY KC +I A+ +F +N+V + +L
Sbjct: 248 LDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSN 307
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
Y + G + EA+ I M + G PD T+ S IS+ A L L G HG + GL +
Sbjct: 308 YARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGW 367
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA------------ 357
++ N ++ Y KCG E + R+F+ M+ + VSW +L +G+ + G
Sbjct: 368 DSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPE 427
Query: 358 -------------------NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
+ I+LF +M G+K D VT++G+ SAC G E + +
Sbjct: 428 RNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAK-W 486
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+++ GI T ++D+ +R G + A NKM D W + + + G
Sbjct: 487 VHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMT-ERDVSAWTAAIGTMAMEG 545
Query: 459 NVE 461
N E
Sbjct: 546 NGE 548
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 154/310 (49%), Gaps = 13/310 (4%)
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC---KSIKYAESVFRTMAWKNVVSWTAM 246
L + KQ+H I +N + LV+ + +S+ YA F ++V S A+
Sbjct: 38 LNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFK-EDVRSDDAL 96
Query: 247 LV------GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+ GY G EA+ ++ M G+ P+ +T V+S C +A+ EG Q HG
Sbjct: 97 FMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGS 156
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ GL + + N L+ FY +CG+++ H++F M+ R+ VSWT+L+ GYA+ + E
Sbjct: 157 VVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEA 216
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LF +M+ G++P VT++ V+SAC++ ++ G + E G++ ++D
Sbjct: 217 VSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCA-YIGELGLKLNKVMVNALVD 275
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+ + G ++ AK ++ + + + T+LS+ G + +L+ P P
Sbjct: 276 MYMKCGAIDAAKRLFDEC-VDRNLVLYNTILSNYARQGLAREALAILDEMLQQGP-RPDR 333
Query: 481 YVLLSSIYAS 490
+LS+I AS
Sbjct: 334 VTMLSAISAS 343
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 106/252 (42%), Gaps = 37/252 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + V WN +ISG DA++++ M +G+ R+T + +L
Sbjct: 425 IPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGI-KADRVTMMGIASACGYLGAPEL 483
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+ +H +I K G + + + LVDM+A+ G P+ + ++N
Sbjct: 484 AKWVHTYIEKNGIPCDMRLNTALVDMFARCG-----------DPQSAMQVFNK------- 525
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
M ++D +WT I + G A LF +M ++G+ D F V
Sbjct: 526 -------------MTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQV 572
Query: 181 LTACGGLLALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
LTAC +E+G +H F + DH + +VD+ + ++ A + ++M +
Sbjct: 573 LTACSHGGQVEQG--LHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPME 630
Query: 239 -NVVSWTAMLVG 249
N V W ++L
Sbjct: 631 PNDVVWGSLLAA 642
>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
Length = 913
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 238/662 (35%), Positives = 353/662 (53%), Gaps = 53/662 (8%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSW L+ G HG +++ M + T S L + G IHG
Sbjct: 284 VSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVGIHG 343
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++ G+ + V S LV +Y+K G I DA+R FD L RGL
Sbjct: 344 LCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFD--------------CAGLGRGLA-- 387
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM------DQFTFGSV 180
+W MI+G G R+A+ +FREMR D+FTF S+
Sbjct: 388 --------------TWNAMISGYAHAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASL 433
Query: 181 LTACGGLLALEEGKQIHAFIIRN--DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
L ACGGL A EG Q+HA + + N + ALVDMY KC + A VF + K
Sbjct: 434 LKACGGLGAPREGAQVHAAMAASGFSTASNAILAGALVDMYVKCGRLPVAMQVFERLERK 493
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
N + WT ++VG+ Q G EA+++F R+G D L S++ A+ A +E+G Q H
Sbjct: 494 NAIQWTTVVVGHAQEGQVMEALELFRRFWRSGARADAHVLSSIVGVLADFALVEQGRQVH 553
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
+ + + ++ N++V Y KCG +++ R+F E+ R+ VSWT +++G K G
Sbjct: 554 CYGVKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFREIPARNVVSWTTMINGLGKHGLGR 613
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
E + +FE+M + G++PDEVT + +LSACS AGLV++ R YF + ++ +RP +HY CM
Sbjct: 614 EAVAMFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACM 673
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
+D+L RAG L EA+ I MP P W TLLS+CR+H +V +G+ A + LL +D NP
Sbjct: 674 VDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAIDGDNP 733
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF--SADDWSSPY 536
+YV LS+++A G W ++R MR +G++K GCSW++ VH F D+ + P
Sbjct: 734 VNYVTLSNVFAEAGAWRECHKVRDAMRRRGLKKQGGCSWVEIGKEVHFFYGGGDEEAHPQ 793
Query: 537 SDQIYAELEKLNRKMIKE-GYVP-DMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPP 594
+ I L + ++ ++ GY D+ LHDV+ + + L HSE+LA+ GL +
Sbjct: 794 AGDIRRVLRDVETRVREQLGYCADDVQFALHDVDEESRAESLRAHSERLAV--GLWLLRN 851
Query: 595 GL---------PIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGD 645
G+ PIRV KNLRVC DCH K +S + +R ++VRDA RFH F++G CSC D
Sbjct: 852 GVDGGGGGHRQPIRVYKNLRVCGDCHEFFKGLSAVVRRALVVRDANRFHRFEHGTCSCKD 911
Query: 646 FW 647
+W
Sbjct: 912 YW 913
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 201/434 (46%), Gaps = 57/434 (13%)
Query: 42 RITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFD 101
R + +L S+ + G Q+HG + K GFGS +G+ L+DMYAK G +
Sbjct: 217 RKMIADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGEL-------- 268
Query: 102 ELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDL 161
+ + +F GM+D++ +SWT ++ G +Q+G + L
Sbjct: 269 -----------------------DMAGEVFGGMRDRNVVSWTALMVGFLQHGDATGCLRL 305
Query: 162 FREMRLEG-LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYC 220
EMR A +++T + L AC + G IH +R ++++ V S+LV +Y
Sbjct: 306 LGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVGIHGLCVRTGYEEHYVVASSLVLLYS 365
Query: 221 KCKSIKYAESVFRTMAW-KNVVSWTAMLVGYGQNGCSEEAVKIFCNM------QRNGIEP 273
K I A VF + + +W AM+ GY G +A+ +F M + +P
Sbjct: 366 KGGRIGDARRVFDCAGLGRGLATWNAMISGYAHAGHGRDALLVFREMRRRRRRHEDQHQP 425
Query: 274 DDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSN-----ALVTFYGKCGNIED 328
D+FT S++ +C L + EG Q H +G F T SN ALV Y KCG +
Sbjct: 426 DEFTFASLLKACGGLGAPREGAQVHAAMAASG---FSTASNAILAGALVDMYVKCGRLPV 482
Query: 329 SHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
+ ++F + ++ + WT +V G+A+ G+ E ++LF + G + D L ++ +
Sbjct: 483 AMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRFWRSGARADAHVLSSIVGVLAD 542
Query: 389 AGLVEKGRHYFEIMVKEYGIR-PIHDHYTC---MIDILSRAGRLEEAKSFINKMPFPPDA 444
LVE+GR V YG++ P + ++D+ + G +EA+ ++P +
Sbjct: 543 FALVEQGRQ-----VHCYGVKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFREIP-ARNV 596
Query: 445 IGWATLLSSCRIHG 458
+ W T+++ HG
Sbjct: 597 VSWTTMINGLGKHG 610
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 132/281 (46%), Gaps = 10/281 (3%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
+L G Q+H + + + +G+ L+DMY KC + A VF M +NVVSWTA++V
Sbjct: 232 SLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDRNVVSWTALMV 291
Query: 249 GYGQNGCSEEAVKIFCNMQ-RNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
G+ Q+G + +++ M+ + P+++TL + + +C + G HG + TG
Sbjct: 292 GFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVGIHGLCVRTGYE 351
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALVSGYAKFGKANETIDLFEK 366
V+++LV Y K G I D+ R+F+ + R +W A++SGYA G + + +F +
Sbjct: 352 EHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHAGHGRDALLVFRE 411
Query: 367 MLSHGL------KPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE-YGIRPIHDHYTCMI 419
M +PDE T +L AC G +G M + ++
Sbjct: 412 MRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFSTASNAILAGALV 471
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
D+ + GRL A ++ +AI W T++ G V
Sbjct: 472 DMYVKCGRLPVAMQVFERLE-RKNAIQWTTVVVGHAQEGQV 511
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 117/245 (47%), Gaps = 34/245 (13%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
+ + W ++ GHA G V +A++++ + G + + S + +++ V+ GRQ+
Sbjct: 494 NAIQWTTVVVGHAQEGQVMEALELFRRFWRSGARADAHVLSSIVGVLADFA-LVEQGRQV 552
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H + +K G+ V G+ +VDMY K GL +A+R F E+P +N+V + TMI GL + GL
Sbjct: 553 HCYGVKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFREIPARNVVSWTTMINGLGKHGLG 612
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
E A+ +F EMR G+ D+ T+ ++L+AC
Sbjct: 613 RE-------------------------------AVAMFEEMRAGGVEPDEVTYLALLSAC 641
Query: 185 GGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS- 242
++E ++ + I R+ + + +VD+ + ++ A + RTM + V
Sbjct: 642 SHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGV 701
Query: 243 WTAML 247
W +L
Sbjct: 702 WQTLL 706
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 242/655 (36%), Positives = 356/655 (54%), Gaps = 77/655 (11%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL----------------- 103
G H ++LK G F+ + ++DMYAK G + A+ F+++
Sbjct: 114 GNLFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWK 173
Query: 104 --------------PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGL 149
P +NI+ + +M+TG + G +E +RR F M ++ +SW M +
Sbjct: 174 SGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAY 233
Query: 150 MQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNV 209
Q +EA++LF +M EG+ D T+ +++C + I I + N
Sbjct: 234 AQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNS 293
Query: 210 FVGSALVDMYCKCKSIKYAESVF-------RTMAW------------------------- 237
FV +AL+DM+ K +++ A ++F + W
Sbjct: 294 FVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPK 353
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEG-- 294
++VVSW +M+ GY QNG S ++++F M I+PD+ T+ SV+S+C ++ +L+
Sbjct: 354 RDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYW 413
Query: 295 --TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
+++ G+ F N+L+ Y KCG++ D+HR+F M RD VS+ L+SG+A
Sbjct: 414 VLDIVREKNIKLGISGF----NSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFA 469
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
G E I L M G++PD VT IGVL+ACS AGL+ +G++ F+ + P
Sbjct: 470 ANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQA-----PTV 524
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLE 472
DHY CM+D+L RAG L+EAK I MP P A + +LL++ RIH V +G+ AA L E
Sbjct: 525 DHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFE 584
Query: 473 LDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDW 532
L+P N +YVLLS+IYAS G+W+ V ++R M++ G++K G SW++YK +VH F+ D
Sbjct: 585 LEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDR 644
Query: 533 SSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFI 592
S S IY L +L RKM + G+V D S L DVE EK +ML HSEKLAI F LL
Sbjct: 645 SHEQSKDIYKLLAELERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLIS 704
Query: 593 PPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G IRVVKNLR+C DCH A K ISK+ REI+VRD RFH F G CSC D+W
Sbjct: 705 EVGTTIRVVKNLRICLDCHTAIKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 184/440 (41%), Gaps = 105/440 (23%)
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
+F D+ ++ M+ + G + + LF+ L F + ++ G
Sbjct: 56 IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAG---- 111
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA------------- 236
+ G HA++++ H D+ F+ +A++DMY K + A ++F MA
Sbjct: 112 -KSGNLFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISG 170
Query: 237 -WK-----------------NVVSWTAMLVGYGQNG------------------------ 254
WK N+++WT+M+ GY + G
Sbjct: 171 CWKSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQ 230
Query: 255 -------CSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL------------------- 288
C +EA+ +F M GI PDD T ISSC+++
Sbjct: 231 SAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIV 290
Query: 289 -------ASLEEGTQFHGRSLVTGLISFI------TVSNALVTFYGKCGNIEDSHRLFNE 335
A L+ +F + + + N +++ Y + G + + LF+
Sbjct: 291 LNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDN 350
Query: 336 MNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS-HGLKPDEVTLIGVLSACSRAGLVEK 394
M RD VSW ++++GYA+ G++ +I+LF++M+S ++PDEVT+ VLSAC G ++
Sbjct: 351 MPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKL 410
Query: 395 GRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
+I V+E I+ + +I + S+ G + +A M D + + TL+S
Sbjct: 411 SYWVLDI-VREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMG-TRDVVSFNTLISGF 468
Query: 455 RIHGNVEIGKWAAESLLELD 474
+G+ GK A + +L ++
Sbjct: 469 AANGH---GKEAIKLVLTME 485
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 105/245 (42%), Gaps = 49/245 (20%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTML-------IMSS 53
MP D VSWN +I+G+A +G +++++ M+ +T +++L +
Sbjct: 351 MPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKL 410
Query: 54 SRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNT 113
S +D+ R+ + + GF S +F MY+K G + DA R F + +++V +NT
Sbjct: 411 SYWVLDIVREKNIKLGISGFNSLIF-------MYSKCGSVADAHRIFQTMGTRDVVSFNT 463
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
+I +G NG +EAI L M EG+ D
Sbjct: 464 LI-------------------------------SGFAANGHGKEAIKLVLTMEEEGIEPD 492
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
T+ VLTAC L EGK + ++ V + +VD+ + + A+ + +
Sbjct: 493 HVTYIGVLTACSHAGLLNEGKN----VFKSIQAPTVDHYACMVDLLGRAGELDEAKMLIQ 548
Query: 234 TMAWK 238
+M K
Sbjct: 549 SMPMK 553
>gi|359481819|ref|XP_002283419.2| PREDICTED: MATE efflux family protein 1 [Vitis vinifera]
Length = 977
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/479 (43%), Positives = 301/479 (62%), Gaps = 12/479 (2%)
Query: 169 GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYA 228
G+ D F S ACG L + G+ +H+F ++ + +VFVGS++VDMY KC I A
Sbjct: 5 GVRPDDHIFPSATKACGILSRCDIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGEIGDA 64
Query: 229 ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL 288
+F M +NVVSW+ M+ GY Q G EEA+++F ++ +DFT SV+ C N
Sbjct: 65 RKMFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVRVCGNS 124
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
LE G Q HG L T S V ++L++ Y KCG IED++ +F+E+ +R+ W A++
Sbjct: 125 TLLELGKQIHGLCLKTSYDSSSFVGSSLISLYSKCGVIEDAYLVFHEIPIRNLGMWNAML 184
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
A+ + DLF++M G+KP+ +T + VL ACS AGLVEKG+ YFE+M KEYGI
Sbjct: 185 IACAQHAHTEKAFDLFKQMEGVGMKPNFITFLCVLYACSHAGLVEKGQFYFELM-KEYGI 243
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
P HY M+D+L RAG+L++A S I KMP P W LL+ CRIHG+ E+ + A+
Sbjct: 244 EPGAQHYASMVDLLGRAGKLKDAVSIIKKMPMEPTESVWGALLTGCRIHGDTELASFVAD 303
Query: 469 SLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFS 528
+ EL P + A+ G+++ ++ R+ +R++GV+K+ G SW++ +R+H F+
Sbjct: 304 RVFELGPVSSAA-----------GRYEEAARARKMLRDQGVKKETGLSWVEEGNRIHTFA 352
Query: 529 ADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFG 588
A D S PY+ IY +LE+L +M + GY+ D S VL +V+ EK + + +HSE+LAIAFG
Sbjct: 353 AGDRSHPYTKDIYKKLEELGEEMERAGYIADTSFVLQEVDGEEKNQTIRYHSERLAIAFG 412
Query: 589 LLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
L+ PP PIRV+KNLRVC DCH A K++SK R I+VRD RFH F++G CSC D+W
Sbjct: 413 LISFPPERPIRVMKNLRVCGDCHTAIKFMSKCCGRTIIVRDNNRFHRFEDGNCSCRDYW 471
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 153/296 (51%), Gaps = 33/296 (11%)
Query: 56 RCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
RC D+G+ +H +K G+ VFVGS +VDMYAK G I DA++ FDE
Sbjct: 25 RC-DIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGEIGDARKMFDE------------- 70
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
M D++ +SW+ MI G Q G + EA+ LF++ +E L ++ F
Sbjct: 71 ------------------MPDRNVVSWSGMIYGYSQMGEDEEALRLFKQALIEDLDVNDF 112
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
TF SV+ CG LE GKQIH ++ + + FVGS+L+ +Y KC I+ A VF +
Sbjct: 113 TFSSVVRVCGNSTLLELGKQIHGLCLKTSYDSSSFVGSSLISLYSKCGVIEDAYLVFHEI 172
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
+N+ W AML+ Q+ +E+A +F M+ G++P+ T V+ +C++ +E+G
Sbjct: 173 PIRNLGMWNAMLIACAQHAHTEKAFDLFKQMEGVGMKPNFITFLCVLYACSHAGLVEKGQ 232
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
+ G+ ++V G+ G ++D+ + +M + E W AL++G
Sbjct: 233 FYFELMKEYGIEPGAQHYASMVDLLGRAGKLKDAVSIIKKMPMEPTESVWGALLTG 288
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 101/200 (50%), Gaps = 10/200 (5%)
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M NG+ PDD S +C L+ + G H ++ TG + V +++V Y KCG
Sbjct: 1 MLDNGVRPDDHIFPSATKACGILSRCDIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGE 60
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
I D+ ++F+EM R+ VSW+ ++ GY++ G+ E + LF++ L L ++ T V+
Sbjct: 61 IGDARKMFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVRV 120
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHY----TCMIDILSRAGRLEEAKSFINKMPFP 441
C + L+E G+ + +K +D + +I + S+ G +E+A +++P
Sbjct: 121 CGNSTLLELGKQIHGLCLKTS-----YDSSSFVGSSLISLYSKCGVIEDAYLVFHEIPIR 175
Query: 442 PDAIGWATLLSSCRIHGNVE 461
+ W +L +C H + E
Sbjct: 176 NLGM-WNAMLIACAQHAHTE 194
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 125/260 (48%), Gaps = 33/260 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW+ +I G++ G +A++++ L + L +++ TFS+++ + + ++L
Sbjct: 71 MPDRNVVSWSGMIYGYSQMGEDEEALRLFKQALIEDL-DVNDFTFSSVVRVCGNSTLLEL 129
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIHG LK + S FVGS L+ +Y+K G+I DA F E+P +N+ M+N
Sbjct: 130 GKQIHGLCLKTSYDSSSFVGSSLISLYSKCGVIEDAYLVFHEIPIRNLGMWN-------- 181
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
M+ Q+ +A DLF++M G+ + TF V
Sbjct: 182 -----------------------AMLIACAQHAHTEKAFDLFKQMEGVGMKPNFITFLCV 218
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC +E+G+ + + +++VD+ + +K A S+ + M +
Sbjct: 219 LYACSHAGLVEKGQFYFELMKEYGIEPGAQHYASMVDLLGRAGKLKDAVSIIKKMPMEPT 278
Query: 241 VS-WTAMLVGYGQNGCSEEA 259
S W A+L G +G +E A
Sbjct: 279 ESVWGALLTGCRIHGDTELA 298
>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 662
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 242/649 (37%), Positives = 358/649 (55%), Gaps = 49/649 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP V+WN +IS H S G +A+++Y+ ML +G+ TFS + S
Sbjct: 61 MPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLP-DAYTFSAIFKAFSEMGVSRE 119
Query: 61 GRQIHGHILKFGFG-SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G++ HG + GF S FV + +VDMYAK G + DA+ FD +
Sbjct: 120 GQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVL--------------- 164
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
DKD + +T +I G Q+GL+ EA+++F +M + +++T S
Sbjct: 165 ----------------DKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLAS 208
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL +CG L L GK IH +++ + V ++L+ MY KC ++ + VF ++A+ +
Sbjct: 209 VLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYAS 268
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
V+WT+ +VG QNG E A+ +F M R I P+ FTL S++ +C++LA LE G Q H
Sbjct: 269 HVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHA 328
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
++ G+ V AL+ YGKCGN+E + +F+ + D VS ++ YA+ G +E
Sbjct: 329 VTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGFGHE 388
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
++LFE++ GL+P+ VT I +L AC+ AGLVE+G F ++ + I DHYTCMI
Sbjct: 389 ALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMI 448
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L RA R EEA I + PD I W TLL++C+IHG VE+ + + +L+ P +
Sbjct: 449 DLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGG 507
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+++LL++IYAS GKWD+V +++ R+ ++K P SW+ VH F A D S P + +
Sbjct: 508 THILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHE 567
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLL-FIPPGLPI 598
I L +L K+I GY PD VL D+E +KI L +HSEKLAIAF L I
Sbjct: 568 ISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNTAI 627
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R+ KNLRVC D I+ RDA RFH FK G CSC D+W
Sbjct: 628 RIFKNLRVCGD--------------YIIARDAKRFHHFKGGICSCKDYW 662
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 200/395 (50%), Gaps = 34/395 (8%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
+++++ ++++ + + +H HILK G + F G L+D Y K +I
Sbjct: 4 YTSLIAQCTNKKSLTTLKSLHTHILKSG-SLFSFFGHKLIDGYIKCSVI----------- 51
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
E+R+LF M ++ ++W +MI+ + G +EAI+L+
Sbjct: 52 --------------------TEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYSN 91
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAF-IIRNDHKDNVFVGSALVDMYCKCK 223
M EG+ D +TF ++ A + EG++ H ++ + FV + +VDMY K
Sbjct: 92 MLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFG 151
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
+K A VF + K+VV +TA++VGY Q+G EA+++F +M + I+P+++TL SV+
Sbjct: 152 KMKDARFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLV 211
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
SC NL L G HG + GL S + +L+T Y KC +EDS ++FN + V+
Sbjct: 212 SCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVT 271
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
WT+ + G + G+ + +F +M+ + P+ TL +L ACS ++E G + V
Sbjct: 272 WTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTV 331
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
K G+ +I + + G +E+A+S + +
Sbjct: 332 K-LGVDGNKFVDAALIHLYGKCGNVEKARSVFDSL 365
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 150/288 (52%), Gaps = 4/288 (1%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
+ S++ C +L K +H I+++ + F G L+D Y KC I A +F M
Sbjct: 4 YTSLIAQCTNKKSLTTLKSLHTHILKSGSLFSFF-GHKLIDGYIKCSVITEARKLFDEMP 62
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
+++V+W +M+ + G ++EA++++ NM G+ PD +T ++ + + + EG +
Sbjct: 63 NRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQK 122
Query: 297 FHGRSLVTGL-ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
HG ++V G +S V+ +V Y K G ++D+ +F+ + +D V +TAL+ GY + G
Sbjct: 123 AHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHG 182
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
E +++FE M+ +KP+E TL VL +C G + G+ ++VK YG+ +
Sbjct: 183 LDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVK-YGLESVVASQ 241
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
T ++ + S+ +E++ N + + + W + + +G E+
Sbjct: 242 TSLLTMYSKCNMVEDSIKVFNSLAYASH-VTWTSFIVGLVQNGREEVA 288
>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
Length = 710
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/647 (33%), Positives = 364/647 (56%), Gaps = 31/647 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW ++ G+ + G + +K++ M+ + + + SS ++
Sbjct: 95 MPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIEE 154
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q HG LK G S+ FV + LV MY+ +A R D+LP ++ ++++ ++G L
Sbjct: 155 GKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYL- 213
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ G +E ++ R M E L +D T+ S
Sbjct: 214 ------------------------------ECGAFKEGAEVLRRMAKEDLVLDNITYLSC 243
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C L L +QIH+ ++R V A+++MY KC + YA+ VF +N+
Sbjct: 244 LRLCSNLRDLNLARQIHSRMVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQNI 303
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V T ++ Y Q+ EEA+ +F M + P+++T ++S A L+ L+ G HG
Sbjct: 304 VLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGL 363
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
L +G + + V NALV Y K G+IED+ + F+ M RD V+W ++ G++ G E
Sbjct: 364 VLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREG 423
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++ F++M+ G P+ +T IGVL ACS G VE+G +YF ++K++ ++P HYTC++
Sbjct: 424 LEAFDRMMIAGEIPNRITFIGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVG 483
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+LS+AG ++A+ F+ P D + W LL++C + N +GK AE + P +
Sbjct: 484 LLSKAGMFKDAEDFMRTAPIEWDVVAWRALLNACYVRRNFRLGKKVAEYAIYKYPNDSGV 543
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS+I+A +W+ V+++R M ++GV+K+PG SWI +++ H+F A++ P I
Sbjct: 544 YVLLSNIHAKSREWEGVAEVRSLMNKRGVKKEPGVSWIGIRNQTHVFLAEENQHPEITLI 603
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
YA+++++ K+ GY PD++ V HDV+ ++ L++HSEKLA+A+GL+ P P+ V
Sbjct: 604 YAKIKEVLSKIRPLGYSPDVAGVFHDVDEEQREDNLSYHSEKLAVAYGLMKTPENSPLYV 663
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KN+R+C DCH+A K ISKI++R I++RD+ RFH F++G+CSC D+W
Sbjct: 664 TKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFRDGQCSCCDYW 710
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 173/354 (48%), Gaps = 3/354 (0%)
Query: 106 KNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM 165
K++ N++I ++ G +R++F M +++ +SW M+ G +G + E + LF+ M
Sbjct: 67 KDVYQINSLINLYVKCGETVRARKVFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSM 126
Query: 166 RLEGLAM-DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
+ ++F V +C +EEGKQ H +++ + FV + LV MY C
Sbjct: 127 VFSDESRPNEFVATVVFKSCSSSGRIEEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSG 186
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
A V + + ++ +++ L GY + G +E ++ M + + D+ T S +
Sbjct: 187 NGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRL 246
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
C+NL L Q H R + G S + S A++ YGKCG + + R+F+ + ++ V
Sbjct: 247 CSNLRDLNLARQIHSRMVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLN 306
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
T ++ Y + E ++LF KM + + P+E T L++ + L++ G +++K
Sbjct: 307 TTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLK 366
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
G R ++++ +++G +E+A+ + M F D + W T++ HG
Sbjct: 367 S-GYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTF-RDIVTWNTMICGFSHHG 418
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 278 LGSVISSCANLASLEEGTQFHGRSLVTGLISF---ITVSNALVTFYGKCGNIEDSHRLFN 334
L ++ CAN + L G HG +VT S + N+L+ Y KCG + ++F+
Sbjct: 34 LNELLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFD 93
Query: 335 EMNVRDEVSWTALVSGYAKFGKANETIDLFEKML-SHGLKPDEVTLIGVLSACSRAGLVE 393
M R+ VSW A++ GY G E + LF+ M+ S +P+E V +CS +G +E
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIE 153
Query: 394 KGRHYFEIMVK 404
+G+ + +K
Sbjct: 154 EGKQFHGCFLK 164
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/639 (36%), Positives = 351/639 (54%), Gaps = 67/639 (10%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
+N LI G A + +V + LML+ + R+T +L ++ V LGR +HG +
Sbjct: 106 FNALIRGLAENSRFEGSVSHFVLMLRLSI-RPDRLTLPFVLKSVAALVDVGLGRCLHGGV 164
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+K G FV LVDMY K+G + + FDE P++N
Sbjct: 165 MKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRN--------------------- 203
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
K + + W +I G + G +A LF AM + GS
Sbjct: 204 ------KAESILLWNVLINGCCKVGDLSKAASLFE-------AMPERNAGS--------- 241
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
++L++ + + + A +F M KNVVSWT M+
Sbjct: 242 -----------------------WNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMIN 278
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
G+ QNG E+A+ +F M G+ P+D T+ S + +C + +L+ G + H G
Sbjct: 279 GFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQL 338
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
+ ALV Y KCGNI+ + R+F E +D ++W+ ++ G+A G ++ + F KM
Sbjct: 339 NRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMK 398
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
S G+ PDEV + +L+ACS +G V++G ++FE M +Y I P HYT ++D+L RAGRL
Sbjct: 399 SAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRL 458
Query: 429 EEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIY 488
+EA SFI MP PD + W L +CR H N+E+ + AE LL+L+P +P SYV LS++Y
Sbjct: 459 DEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVY 518
Query: 489 ASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLN 548
A+ G+W+ V ++R M+ +GV KDPG S+I+ + +VH F A D + +++I +LE++
Sbjct: 519 AAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEIT 578
Query: 549 RKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCS 608
+EGY+P+ + VLH++E EK L HSEKLA+AFGL+ PG IR+VKNLRVC
Sbjct: 579 ASAKQEGYMPETAWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCG 638
Query: 609 DCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
DCH+ KY SK+++REI++RD RFH FK+G CSCGD+W
Sbjct: 639 DCHSMMKYASKLSRREIILRDIKRFHHFKDGTCSCGDYW 677
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 129/285 (45%), Gaps = 20/285 (7%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
L + QIHA I ++ N V + L+ C KS+ YA S+FR N+ + A++
Sbjct: 52 TLPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIR 111
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL-- 306
G +N E +V F M R I PD TL V+ S A L + G HG + GL
Sbjct: 112 GLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEF 171
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS----WTALVSGYAKFGKANETID 362
SF+ VS LV Y K G + +LF+E R++ W L++G K G ++
Sbjct: 172 DSFVRVS--LVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAAS 229
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL 422
LFE M + G + R G +++ R F M ++ + +T MI+
Sbjct: 230 LFEAMPERNAGSWNSLINGFV----RNGDLDRARELFVQMPEKNVVS-----WTTMINGF 280
Query: 423 SRAGRLEEAKSFINKM---PFPPDAIGWATLLSSCRIHGNVEIGK 464
S+ G E+A S +M P+ + + L +C G +++G+
Sbjct: 281 SQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGE 325
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 130/287 (45%), Gaps = 22/287 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW +I+G + +G A+ ++ ML++G+ + +T + L+ + + +
Sbjct: 265 MPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGV-RPNDLTVVSALLACTKIGALQV 323
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +IH ++ GF +G+ LVDMYAK G I A R F E K+++ ++ MI G
Sbjct: 324 GERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAI 383
Query: 121 RGLVEESRRLFRGMK----DKDSISWTTMITGLMQNGLEREAIDLFREMRLE---GLAMD 173
G +++ + F MK + D + + ++T +G + ++ F MRL+ M
Sbjct: 384 HGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMK 443
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
+T L G L + +FI + + AL +C C++ K E
Sbjct: 444 HYTLIVDLLGRAGRL-----DEALSFIQSMPINPDFVIWGAL---FCACRAHKNIEMAEL 495
Query: 234 T------MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD 274
T + K+ S+ + Y G E+ ++ M+ G+E D
Sbjct: 496 TAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKD 542
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/643 (34%), Positives = 360/643 (55%), Gaps = 33/643 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D +SWN +ISG S+G ++A++++ M G L T ++L + +
Sbjct: 471 MPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQG-HELDSTTLLSVLPACARSHYWFV 529
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +HG+ +K G + + L+DMY+ +
Sbjct: 530 GRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHS------------------------- 564
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ ++FR M K+ +SWT MIT + GL + L +EM L+G+ D F SV
Sbjct: 565 ------TNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSV 618
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L G +L++GK +H + IRN + + V +AL++MY C++++ A VF + K++
Sbjct: 619 LHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDI 678
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SW ++ GY +N + E+ +F +M +P+ T+ ++ + A+++SLE G + H
Sbjct: 679 ISWNTLIGGYSRNNFANESFSLFSDMLLQ-FKPNTVTMTCILPAVASISSLERGREIHAY 737
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+L G + SNALV Y KCG + + LF+ + ++ +SWT +++GY G +
Sbjct: 738 ALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDA 797
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LFE+M G++PD + +L AC +GL +G +F M KEY I P HYTC++D
Sbjct: 798 VALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVD 857
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+LS G L+EA FI MP PD+ W +LL CRIH +V++ + A+ + +L+P N
Sbjct: 858 LLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEPENTGY 917
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLL++IYA +W+ V +L+ + +G+R++ GCSWI+ + +VH+F AD+ + P ++I
Sbjct: 918 YVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGCSWIEVRGKVHVFIADNRNHPEWNRI 977
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
L+ + R+M +EG+ P L + + L HS KLA+ FG+L +P G PIRV
Sbjct: 978 AEFLDHVARRMREEGHDPKKKYSLMGANDAVHDEALCGHSSKLAVTFGVLHLPEGRPIRV 1037
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSC 643
KN +VCS CH A K+ISK+ REI++RD+ RFH F+ G CSC
Sbjct: 1038 TKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHHFEGGRCSC 1080
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 133/531 (25%), Positives = 231/531 (43%), Gaps = 69/531 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +SWN ISG+ S+G + AV +++ M +G S++ ++S C +L
Sbjct: 259 MHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEG------TEISSVTVLSVLPACAEL 312
Query: 61 G-----RQIHGHILKFGF---------GSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEK 106
G + +HG+ +K G G +GS LV MY K G + A+R FD +P K
Sbjct: 313 GFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSK 372
Query: 107 NIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR 166
V W ++ G + E++ LF +M
Sbjct: 373 GNVHV------------------------------WNLIMGGYAKAAEFEESLLLFEQMH 402
Query: 167 LEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIK 226
G+ D+ +L L +G H ++++ V +AL+ Y K I
Sbjct: 403 ELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMID 462
Query: 227 YAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCA 286
A VF M ++ +SW +++ G NG + EA+++F M G E D TL SV+ +CA
Sbjct: 463 NAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACA 522
Query: 287 NLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTA 346
G HG S+ TGLI +++NAL+ Y C + ++++F M ++ VSWTA
Sbjct: 523 RSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTA 582
Query: 347 LVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY 406
+++ Y + G ++ L ++M+ G+KPD + VL + +++G+ ++
Sbjct: 583 MITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRN- 641
Query: 407 GIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWA 466
G+ + ++++ +EEA+ + + D I W TL+ G +A
Sbjct: 642 GMEKLLPVANALMEMYVNCRNMEEARLVFDHVT-NKDIISWNTLI------GGYSRNNFA 694
Query: 467 AES-------LLELDPYNPASYVLLSSIYA----SKGKWDHVSQLRRTMRE 506
ES LL+ P +L ++ + +G+ H LRR E
Sbjct: 695 NESFSLFSDMLLQFKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLE 745
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 119/457 (26%), Positives = 199/457 (43%), Gaps = 48/457 (10%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
W L+S +A G + V ++ M G+ + S +L +S + G IHG +
Sbjct: 166 WTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAH-AVSCVLKCIASLGSITEGEVIHGLL 224
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
K G G V + L+ +Y++ G + DA + FD + ++ + +N+ I+G
Sbjct: 225 EKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYF--------- 275
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
NG A+DLF +M EG + T SVL AC L
Sbjct: 276 ----------------------SNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELG 313
Query: 189 ALEEGKQIHAFIIRN---------DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK- 238
GK +H + +++ + +GS LV MY KC + A VF M K
Sbjct: 314 FELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKG 373
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
NV W ++ GY + EE++ +F M GI PD+ L ++ L+ +G H
Sbjct: 374 NVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAH 433
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G + G + V NAL++FY K I+++ +F+ M +D +SW +++SG G +
Sbjct: 434 GYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNS 493
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR--HYFEIMVKEYGIRPIHDHYT 416
E I+LF +M G + D TL+ VL AC+R+ GR H + + G + +
Sbjct: 494 EAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLAN--- 550
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
++D+ S M + + W +++S
Sbjct: 551 ALLDMYSNCSDWHSTNQIFRNMA-QKNVVSWTAMITS 586
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 145/596 (24%), Positives = 254/596 (42%), Gaps = 115/596 (19%)
Query: 38 GNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYV--FVGSPLVDMYAKLGLIYD 95
G + ++ ++ + R ++ R+ H +++ G G + +G LV Y K G +
Sbjct: 90 GGVGVRSYCAVVQLCGEERSLEAARRAHA-LVRAGTGGIIGSVLGKRLVLAYLKCGDLGG 148
Query: 96 AKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLE 155
A+ FDE+P + D WT++++ + G
Sbjct: 149 ARMVFDEMPPRV-----------------------------ADVRVWTSLMSAYAKAGDF 179
Query: 156 REAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSAL 215
+E + LFR+M+ G++ D VL L ++ EG+ IH + + + V +AL
Sbjct: 180 QEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANAL 239
Query: 216 VDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDD 275
+ +Y +C ++ A VF +M ++ +SW + + GY NG + AV +F M G E
Sbjct: 240 IALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISS 299
Query: 276 FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFI---------TVSNALVTFYGKCGNI 326
T+ SV+ +CA L G HG S+ +GL+ + + + LV Y KCG++
Sbjct: 300 VTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDM 359
Query: 327 EDSHRLFNEMNVRDEVS-WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS- 384
+ R+F+ M + V W ++ GYAK + E++ LFE+M G+ PDE L +L
Sbjct: 360 GSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKC 419
Query: 385 ----ACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF 440
+C+R GLV G +VK G +I +++ ++ A ++MP
Sbjct: 420 ITCLSCARDGLVAHG-----YLVK-LGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPH 473
Query: 441 PPDAIGWATLLSSCRIHG-NVE-----IGKWA------AESLLELDPYNPASYV------ 482
D I W +++S C +G N E + W + +LL + P S+
Sbjct: 474 -QDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRV 532
Query: 483 ------------------LLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSW---IKYK 521
L +Y++ W +Q+ R M +K V SW I
Sbjct: 533 VHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNV-----VSWTAMITSY 587
Query: 522 SRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPD---MSSVLHDVELSEKIK 574
+R +F D++ L+ +M+ +G PD ++SVLH E +K
Sbjct: 588 TRAGLF----------DKVAGLLQ----EMVLDGIKPDVFAVTSVLHGFAGDESLK 629
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 132/253 (52%), Gaps = 9/253 (3%)
Query: 157 EAIDLFREMRLEGL--AMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNV--FVG 212
+A DL +RL G + ++ +V+ CG +LE ++ HA ++R + +G
Sbjct: 75 QAGDLAAALRLLGSDGGVGVRSYCAVVQLCGEERSLEAARRAHA-LVRAGTGGIIGSVLG 133
Query: 213 SALVDMYCKCKSIKYAESVFRTMAWK--NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
LV Y KC + A VF M + +V WT+++ Y + G +E V +F MQ G
Sbjct: 134 KRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCG 193
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
+ PD + V+ A+L S+ EG HG GL V+NAL+ Y +CG +ED+
Sbjct: 194 VSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAM 253
Query: 331 RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
++F+ M+ RD +SW + +SGY G + +DLF KM S G + VT++ VL AC+ G
Sbjct: 254 QVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELG 313
Query: 391 --LVEKGRHYFEI 401
LV K H + +
Sbjct: 314 FELVGKVVHGYSM 326
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 238/658 (36%), Positives = 370/658 (56%), Gaps = 50/658 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +SWN +I+ +G A+ Y LM ++ +G S +S C L
Sbjct: 444 MEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGP------SNFAAISGLSSCAGL 497
Query: 61 G-----RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
G +Q+H +K+G V + LV MY + G +
Sbjct: 498 GLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRM---------------------- 535
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLE--REAIDLFREMRLEGLAMD 173
E +F M D +SW + I G+M + E++ +F M GL +
Sbjct: 536 ---------SECWEIFNSMSAHDVVSWNS-IMGVMASSQAPITESVQVFSNMMKSGLVPN 585
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
+ TF + L A L LE GKQIH+ ++++ ++ V +AL+ Y K + E +F
Sbjct: 586 KVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFS 645
Query: 234 TMAWK-NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
M+ + + +SW +M+ GY NG +EA+ C M + D T V+++CA++A+LE
Sbjct: 646 RMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALE 705
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
G + H L + L S + V +ALV Y KCG I+ + ++F+ M+ ++E SW +++SGYA
Sbjct: 706 RGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYA 765
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
+ G + +++FE+M G PD VT + VLSACS AGLVE+G YFE+M ++YGI P
Sbjct: 766 RHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFELM-EDYGILPRI 824
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC---RIHGNVEIGKWAAES 469
+HY+C+ID+L RAG L++ + ++ +MP P+ + W T+L +C + +++G A+
Sbjct: 825 EHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRM 884
Query: 470 LLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSA 529
LLEL+P NP +YVL S +A+ G+W+ ++ R M+ V+K+ G SW+ VH F A
Sbjct: 885 LLELEPQNPVNYVLSSKFHAAIGRWEDTAKARAAMKGAAVKKEAGRSWVTLTDGVHTFIA 944
Query: 530 DDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGL 589
D S P + +IY +L L +K+ GYVP VLHD+E K ++L +HSEKLA+AF L
Sbjct: 945 GDRSHPNTKEIYEKLNFLIQKIRNAGYVPLTEYVLHDLEEENKEELLRYHSEKLAVAFVL 1004
Query: 590 LFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G PIR++KNLRVC DCH A +YIS+I R+I++RD++RFH FK+G+CSCGD+W
Sbjct: 1005 TRSSSGGPIRIMKNLRVCGDCHTAFRYISQIVGRQIILRDSIRFHHFKDGKCSCGDYW 1062
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 236/466 (50%), Gaps = 35/466 (7%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLG---NLSRITFSTMLIMSSSRRC- 57
P D ++WN L+S +A G ++ M D G + TF +++ + C
Sbjct: 234 PVRDLITWNALMSVYAKRGDAICTFTLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCS 293
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
+ L Q+ +LK G S ++VGS LV +A+ G++ +AK + L E+N V N +I G
Sbjct: 294 LGLLDQLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAG 353
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
L+++ E + +F G +D +++ T + L A+ +F+
Sbjct: 354 LVKQQHGEAAAEIFMGARDSAAVNVDTYVVLLS--------------------AIAEFS- 392
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
TA G L +G+++HA ++R H + V + LV+MY KC +I A VF+ M
Sbjct: 393 ----TAEQG---LRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLME 445
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
++ +SW ++ QNG E A+ +C M++N I P +F S +SSCA L L G Q
Sbjct: 446 ARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQ 505
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF-G 355
H ++ GL +VSNALV YG+CG + + +FN M+ D VSW +++ A
Sbjct: 506 LHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQA 565
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
E++ +F M+ GL P++VT + L+A + ++E G+ +M+K +G+ +
Sbjct: 566 PITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLK-HGVTEDNAVD 624
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
++ +++G ++ + ++M DAI W +++S +G+++
Sbjct: 625 NALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQ 670
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 225/479 (46%), Gaps = 49/479 (10%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSR--ITFSTMLIMSSSRRCVDLGR 62
+ V+ N LI+G A +++ N+ + S + S++ + + GR
Sbjct: 343 NAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGR 402
Query: 63 QIHGHILKFG-FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
++H H+L+ G + V + LV+MYAK G I
Sbjct: 403 EVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAI---------------------------- 434
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
+++ R+F+ M+ +D ISW T+IT L QNG A+ + MR + F S L
Sbjct: 435 ---DKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGL 491
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
++C GL L G+Q+H ++ + V +ALV MY +C + +F +M+ +VV
Sbjct: 492 SSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVV 551
Query: 242 SWTAML-VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
SW +++ V E+V++F NM ++G+ P+ T + +++ L+ LE G Q H
Sbjct: 552 SWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSV 611
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN-VRDEVSWTALVSGYAKFGKANE 359
L G+ V NAL++ Y K G+++ RLF+ M+ RD +SW +++SGY G E
Sbjct: 612 MLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQE 671
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH----Y 415
+D M+ D T VL+AC+ +E+G + + +G+R +
Sbjct: 672 AMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERG-----MEMHAFGLRSHLESDVVVE 726
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
+ ++D+ S+ GR++ A + M + W +++S HG +G+ A E E+
Sbjct: 727 SALVDMYSKCGRIDYASKVFHSMS-QKNEFSWNSMISGYARHG---LGRKALEIFEEMQ 781
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 124/473 (26%), Positives = 212/473 (44%), Gaps = 63/473 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLG-NLSRITFSTMLIMSSSRRCVD 59
MP + VSW LISGH G DA ++ ML++G G + TF ++L R C D
Sbjct: 126 MPGRNAVSWTCLISGHVLSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVL-----RACQD 180
Query: 60 LGR-------QIHGHILKFGFGSYVFVGSPLVDMYA--KLGLIYDAKRGFDELPEKNIVM 110
G Q+HG + K F S V + L+ MY +G A+R FD P ++++
Sbjct: 181 SGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLIT 240
Query: 111 YNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL 170
+N +++ +RG + LFR M+ DS G+E L
Sbjct: 241 WNALMSVYAKRGDAICTFTLFRAMQYDDS-------------GIE--------------L 273
Query: 171 AMDQFTFGSVLTA-----CG-GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
+ TFGS++TA C GLL Q+ ++++ +++VGSALV + +
Sbjct: 274 RPTEHTFGSLITATYLSSCSLGLL-----DQLFVRVLKSGCSSDLYVGSALVSAFARHGM 328
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN-GIEPDDFTLGSVIS 283
+ A+ ++ + +N V+ ++ G + E A +IF + + + D + + ++S
Sbjct: 329 LDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVV--LLS 386
Query: 284 SCANLASLEE----GTQFHGRSLVTGLI-SFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
+ A ++ E+ G + H L G I I VSN LV Y KCG I+ + R+F M
Sbjct: 387 AIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEA 446
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
RD +SW +++ + G + + M + + P I LS+C+ GL+ G+
Sbjct: 447 RDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQL 506
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
VK +G+ ++ + GR+ E N M D + W +++
Sbjct: 507 HCDAVK-WGLYLDTSVSNALVKMYGECGRMSECWEIFNSMS-AHDVVSWNSIM 557
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 195/413 (47%), Gaps = 26/413 (6%)
Query: 97 KRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLER 156
KRG ++ + N ++ + ++ +RR+F GM ++++SWT +I+G + +GL
Sbjct: 93 KRGLTH----DLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGLPE 148
Query: 157 EAIDLFREMRLEGLAM--DQFTFGSVLTAC--GGLLALEEGKQIHAFIIRNDHKDNVFVG 212
+A LFR M EG FTFGSVL AC G L Q+H + + + N V
Sbjct: 149 DAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVC 208
Query: 213 SALVDMY--CKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN- 269
+AL+ MY C A+ VF T +++++W A++ Y + G + +F MQ +
Sbjct: 209 NALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQYDD 268
Query: 270 -GIE--PDDFTLGSVISSCANLASLEEG--TQFHGRSLVTGLISFITVSNALVTFYGKCG 324
GIE P + T GS+I++ L+S G Q R L +G S + V +ALV+ + + G
Sbjct: 269 SGIELRPTEHTFGSLITA-TYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFARHG 327
Query: 325 NIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML-SHGLKPDEVTLIGVL 383
++++ ++ + R+ V+ L++G K ++F S + D T + +L
Sbjct: 328 MLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVD--TYVVLL 385
Query: 384 SACSRAGLVE----KGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP 439
SA + E KGR +++ I ++++ ++ G +++A M
Sbjct: 386 SAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLME 445
Query: 440 FPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKG 492
D I W T++++ +G E L+ + P+++ +S + + G
Sbjct: 446 -ARDRISWNTIITALDQNGYCE-AAMMNYCLMRQNSIGPSNFAAISGLSSCAG 496
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 124/256 (48%), Gaps = 24/256 (9%)
Query: 194 KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQN 253
+ +H +++ ++F+ + LV+ Y K + A VF M +N VSWT ++ G+ +
Sbjct: 85 ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLS 144
Query: 254 GCSEEAVKIFCNMQRN--GIEPDDFTLGSVISSCANLASLEEG--TQFHGRSLVTGLISF 309
G E+A +F M R G P FT GSV+ +C + G Q HG T S
Sbjct: 145 GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSN 204
Query: 310 ITVSNALVTFYGKC--GNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
TV NAL++ YG C G + R+F+ VRD ++W AL+S YAK G A T LF M
Sbjct: 205 TTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAM 264
Query: 368 LSHG----LKPDEVTLIGV-----LSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--T 416
L+P E T + LS+CS GL++ ++ V+ D Y +
Sbjct: 265 QYDDSGIELRPTEHTFGSLITATYLSSCS-LGLLD------QLFVRVLKSGCSSDLYVGS 317
Query: 417 CMIDILSRAGRLEEAK 432
++ +R G L+EAK
Sbjct: 318 ALVSAFARHGMLDEAK 333
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/603 (37%), Positives = 340/603 (56%), Gaps = 36/603 (5%)
Query: 46 STMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPE 105
S +LI +S + R+IH + K F+G LV Y KLG
Sbjct: 43 SALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGY------------- 89
Query: 106 KNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM 165
E++ +LF M KD +SW ++I+G + ++ F M
Sbjct: 90 ------------------AEDALKLFDDMPHKDLVSWNSLISGFSR--CLHMSLTAFYTM 129
Query: 166 RLE-GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
+ E + ++ T S+++AC G AL+ GK IH F I+ V V ++L++MY K
Sbjct: 130 KFEMSVKPNEVTILSMISACSG--ALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGD 187
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A +F + N VSW +++ NGC+ E + F M+R GIE D+ T+ +++ +
Sbjct: 188 LTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQA 247
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
C +L + HG TG + IT++ AL+ Y K G + S+ +F E+ D V+W
Sbjct: 248 CLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAW 307
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
TA+++GYA G E I LFE M + GL+PD VT +LSACS +GLV +G+ YF +M +
Sbjct: 308 TAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSE 367
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
YGI P DHY+CM+D+L R G L +A I MP P+A W LL +CR+HGN+E+GK
Sbjct: 368 VYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGK 427
Query: 465 WAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRV 524
AE L+ ++P +P +Y++LS++Y++ W +++R ++E+G+++ PG S I+Y ++
Sbjct: 428 EVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGYSSIEYGNKN 487
Query: 525 HIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLA 584
H F D S P +++IY++LE+L K+ K GY VL DVE K M+N HSEKLA
Sbjct: 488 HHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDVEEEVKEDMINKHSEKLA 547
Query: 585 IAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCG 644
IAFGLL G + + KNLR+C DCH+ K IS I +R I++RD RFH F +G CSC
Sbjct: 548 IAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIIIRDPKRFHHFSDGFCSCA 607
Query: 645 DFW 647
D+W
Sbjct: 608 DYW 610
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 182/392 (46%), Gaps = 38/392 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN LISG + ++ ++ + M + + +T +M+ S+ +D
Sbjct: 100 MPHKDLVSWNSLISGFSR--CLHMSLTAFYTMKFEMSVKPNEVTILSMI--SACSGALDA 155
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ IHG +K G V V + L++MY K G + A R F+ +P+ N V +N++I +
Sbjct: 156 GKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQV- 214
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
NG RE ID F +MR G+ D+ T ++
Sbjct: 215 ------------------------------TNGCAREGIDYFNKMRRLGIEQDEGTILAL 244
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L + + IH + + + +AL+D Y K + + VF + + +
Sbjct: 245 LQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADR 304
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQFHG 299
V+WTAML GY +G EA+K+F +M G+EPD T ++S+C++ + EG + F+
Sbjct: 305 VAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNV 364
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKAN 358
S V G+ + + +V G+CG + D++ + M + W AL+ G
Sbjct: 365 MSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIE 424
Query: 359 ETIDLFEKMLS-HGLKPDEVTLIGVLSACSRA 389
++ E +++ L P ++ + + SR+
Sbjct: 425 LGKEVAEHLINMEPLDPRNYIMLSNMYSASRS 456
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/647 (35%), Positives = 346/647 (53%), Gaps = 66/647 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + + +N++I + ++ +DA+ V+ M+ G T+ +L S + +
Sbjct: 93 IPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSP-DHYTYPCVLKACSCSDNLRI 151
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+HG + K G +FVG+ L+ +Y K G + +A+ DE
Sbjct: 152 GLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDE------------------ 193
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
M+ KD +SW +M+ G QN +A+D+ REM D T S+
Sbjct: 194 -------------MQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASL 240
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A + N +NV Y E +F + K++
Sbjct: 241 LPA-----------------VTNTSSENVL----------------YVEEMFMNLEKKSL 267
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW M+ Y +N ++V ++ M + +EPD T SV+ +C +L++L G + H
Sbjct: 268 VSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEY 327
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
L + + N+L+ Y +CG +ED+ R+F+ M RD SWT+L+S Y G+
Sbjct: 328 VERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNA 387
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LF +M + G PD + + +LSACS +GL+ +G+ YF+ M +Y I PI +H+ C++D
Sbjct: 388 VALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVD 447
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L R+GR++EA + I +MP P+ W LLSSCR++ N++IG AA+ LL+L P
Sbjct: 448 LLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNMDIGILAADKLLQLAPEESGY 507
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS+IYA G+W V+ +R M+ + +RK PG S ++ ++VH F A D P S +I
Sbjct: 508 YVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQVHTFLAGDTYHPQSKEI 567
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y EL L KM + GYVP S LHDVE +K L HSEKLAI F +L PIR+
Sbjct: 568 YEELSVLVGKMKELGYVPKTDSALHDVEEEDKECHLAVHSEKLAIVFAILNTQES-PIRI 626
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCH A K ISKI QREI++RD RFH FK+G CSCGD+W
Sbjct: 627 TKNLRVCGDCHIAAKLISKIVQREIVIRDTNRFHHFKDGICSCGDYW 673
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 165/392 (42%), Gaps = 66/392 (16%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+ +H + F +G L+ YA G A+ FD +PE+N++ YN
Sbjct: 52 KNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNV-------- 103
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
MI M N L +A+ +FR+M G + D +T+ VL
Sbjct: 104 -----------------------MIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVL 140
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
AC L G Q+H + + N+FVG+ L+ +Y KC + A V M K+VV
Sbjct: 141 KACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVV 200
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW +M+ GY QN ++A+ I M +PD T+ S++ + N +S
Sbjct: 201 SWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSS----------- 249
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
N+ +F + + VSW ++S Y K +++
Sbjct: 250 ----------------------ENVLYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSV 287
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
DL+ +M ++PD +T VL AC + GR E V+ + P +ID+
Sbjct: 288 DLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHE-YVERKKLCPNMLLENSLIDM 346
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+R G LE+AK ++M F D W +L+S+
Sbjct: 347 YARCGCLEDAKRVFDRMKF-RDVASWTSLISA 377
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 134/292 (45%), Gaps = 16/292 (5%)
Query: 194 KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQN 253
K +H+ + +N +G L+ Y A +VF + +NV+ + M+ Y N
Sbjct: 52 KNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNN 111
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVS 313
++A+ +F +M G PD +T V+ +C+ +L G Q HG GL + V
Sbjct: 112 HLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVG 171
Query: 314 NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLK 373
N L+ YGKCG + ++ + +EM +D VSW ++V+GYA+ + ++ +D+ +M K
Sbjct: 172 NGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQK 231
Query: 374 PDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL---SRAGRLEE 430
PD T+ +L A + + Y E M + + + MI + S G+ +
Sbjct: 232 PDACTMASLLPAVTNTS--SENVLYVEEMFMNLEKKSLVS-WNVMISVYMKNSMPGKSVD 288
Query: 431 AKSFINKMPFPPDAIGWATLLSSC----------RIHGNVEIGKWAAESLLE 472
+ K PDAI A++L +C RIH VE K LLE
Sbjct: 289 LYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLE 340
>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 187/370 (50%), Positives = 268/370 (72%)
Query: 278 LGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN 337
+ ++ +CA++A+LE+G Q H + G ++VSN LV YGKCG IED+ +F+++
Sbjct: 1 MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLL 60
Query: 338 VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH 397
D SW A++SG A+ G E + LFE+ML G+KP+++T + VLS CS AGLV++GR+
Sbjct: 61 EPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRN 120
Query: 398 YFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIH 457
YF+ M +++GI P +HY+CM+D+ RAG L+EA +FIN+MP P+A W +LL +CR+H
Sbjct: 121 YFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVH 180
Query: 458 GNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSW 517
GN+E+ + A E L+EL P NP +YVLLS+IYA+ G+WD ++R+ M+++ V+K+PGCSW
Sbjct: 181 GNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSW 240
Query: 518 IKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLN 577
I+ +++VH F D S P ++IY LE L +M GY+P+ + VLHDVE +K +L
Sbjct: 241 IEVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWILG 300
Query: 578 HHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFK 637
HHSEKLAIAFG++ PPG IRVVKNLRVC DCH ATK+IS+I REI++RD RFH FK
Sbjct: 301 HHSEKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHHFK 360
Query: 638 NGECSCGDFW 647
+G+CSCGD+W
Sbjct: 361 DGQCSCGDYW 370
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 115/227 (50%), Gaps = 11/227 (4%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
+L AC + ALE+GKQ+HA II+ + +V V + LVDMY KC I+ A+ VF +
Sbjct: 1 MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLL 60
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
+V SW AM+ G Q+GC +EAV +F M + G++P+ T V+S C++ ++EG
Sbjct: 61 EPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRN 120
Query: 297 -FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKF 354
F + G+ + +V +G+ G ++++ N+M V S W +L+
Sbjct: 121 YFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVH 180
Query: 355 GKANETIDLFEKMLSHGLKPDE----VTLIGVLSACSR---AGLVEK 394
G E+++ L P+ V L + +A R AG V K
Sbjct: 181 GNIELAERAVEQLIE--LTPENPGTYVLLSNIYAAAGRWDDAGKVRK 225
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 102/248 (41%), Gaps = 64/248 (25%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
+ +L +S ++ G+Q+H I+K GF V V + LVDMY K G I DA+ F +L
Sbjct: 1 MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLL 60
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
E ++ +N MI+GL Q+G +EA+ LF +
Sbjct: 61 EPDVASWNAMISGL-------------------------------AQHGCGKEAVLLFEQ 89
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M G+ +Q TF VL+ C ++EG+ + R DH +
Sbjct: 90 MLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTR-DHGIS---------------- 132
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
++ M+ +G+ GC +EA+ M +EP+ GS++ +
Sbjct: 133 -------------PKAEHYSCMVDLFGRAGCLDEALNFINQMP---VEPNASVWGSLLGA 176
Query: 285 CANLASLE 292
C ++E
Sbjct: 177 CRVHGNIE 184
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 3/127 (2%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D SWN +ISG A HG +AV ++ ML+ G+ ++ITF +L S VD GR
Sbjct: 63 DVASWNAMISGLAQHGCGKEAVLLFEQMLQTGV-KPNQITFVVVLSGCSHAGLVDEGRNY 121
Query: 65 HGHILK-FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITGLLRRG 122
+ + G S +VD++ + G + +A +++P E N ++ +++ G
Sbjct: 122 FDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHG 181
Query: 123 LVEESRR 129
+E + R
Sbjct: 182 NIELAER 188
>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 767
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 233/678 (34%), Positives = 372/678 (54%), Gaps = 64/678 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLML---------KDGLGNLSRITFSTMLIMSSSR 55
D VSW LIS ++S+G V++A K + M G+ +S + +
Sbjct: 119 DVVSWTALISAYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGS 178
Query: 56 RCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
C+ G +HG ++K+GFG +G+ +V MY+ + A R F+ +P
Sbjct: 179 NCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIP----------- 227
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM--- 172
++ +D +SW ++I+G NG A+ F +M EG +
Sbjct: 228 ------------------IEQRDVVSWNSLISGFTLNGEAERALRTFEDMVSEGTSAVEP 269
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHK----DNVFVGSALVDMYCKCKSIKYA 228
++ T ++L +C L +E +H +I +V V +AL+DM+ +C ++ A
Sbjct: 270 NRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALA 329
Query: 229 ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG------IEPDDFTLGSVI 282
+F + KNVV W+AM+ GY Q C EEA+++F M G ++P+ TL SVI
Sbjct: 330 REIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVI 389
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN--VRD 340
++C+ L + + H ++ TGL +++AL+ KCG+IE ++F+EM+ R
Sbjct: 390 AACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRT 449
Query: 341 EVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
VSW++++ G+ ++LF +M + G +P+E+T I VLSACS AGLVE+G+ F
Sbjct: 450 VVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFN 509
Query: 401 IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
M K+YG+ P HY C++D+L RAG L+EA + I MP D W +LL++C +HGN
Sbjct: 510 SMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNC 569
Query: 461 EIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKY 520
++G+ + +L LD + +VLL+++Y G+WD V ++R +R G+RK PG S+I+
Sbjct: 570 KLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEI 629
Query: 521 KSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEG-YVPDMSSVLHDVELSEKIKMLNHH 579
+ V+ F A+D S P S+ IY EL+ L+ ++ K YV + + D +++ I +H
Sbjct: 630 GNEVYSFMAEDRSHPESEMIYKELDGLDERVRKAAKYVTETGLNVEDGDIAGLILRCKYH 689
Query: 580 SEKLAIAFGLLFIP----------PGLPIRVVKNLRVCSDCHNATKYISKITQREILVRD 629
SE+LAIAFGL+ I PIR+ KNLRVC DCH TK +SK+ RE++VRD
Sbjct: 690 SERLAIAFGLIMIDRHSTCSCSLRTATPIRITKNLRVCRDCHAYTKLVSKVIDRELIVRD 749
Query: 630 AVRFHLFKNGECSCGDFW 647
A RFH F++G CSCGD+W
Sbjct: 750 AHRFHHFRDGFCSCGDYW 767
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/517 (25%), Positives = 236/517 (45%), Gaps = 71/517 (13%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D WN LI+ +A+ A+ + M + + + TF +L ++ R + Q+
Sbjct: 17 DTFHWNSLIAKNATQNP-QTALTFFTRMQAHAVPS-NNFTFPALLKACAALRRLLPTLQV 74
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H ++ + G + F + LVD Y K G Y A + FDE+PE ++
Sbjct: 75 HAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSV---------------- 118
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL-------EGLAMDQFTF 177
D +SWT +I+ NG EA F MR E +D +
Sbjct: 119 -------------DVVSWTALISAYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSL 165
Query: 178 GSVLTACG---GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR- 233
G++++AC G L G +H +++ + +G+++V MY CK + A VF
Sbjct: 166 GALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNG 225
Query: 234 -TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG---IEPDDFTLGSVISSCANLA 289
+ ++VVSW +++ G+ NG +E A++ F +M G +EP+ T+ +++ SCA L
Sbjct: 226 IPIEQRDVVSWNSLISGFTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELG 285
Query: 290 SLEEGTQFH----GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
+E + H R + + V AL+ + +CGN+ + +F+ + ++ V W+
Sbjct: 286 CVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWS 345
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHG------LKPDEVTLIGVLSACSRAGLVEKGRHYF 399
A+++GY + E + LF +ML G +KP+ VTL+ V++ACSR G
Sbjct: 346 AMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSAS--- 402
Query: 400 EIMVKEYGIRPIHDH----YTCMIDILSRAGRLEEAKSFINKMPFPP-DAIGWATLLSSC 454
M+ +Y + D + +ID+ ++ G +E + ++M + W++++ +
Sbjct: 403 --MIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAE 460
Query: 455 RIHGNVEIGKWAAESLLELDP--YNPASYVLLSSIYA 489
IHG GK A E E+ Y P +S + A
Sbjct: 461 GIHGE---GKRALELFSEMRTGGYEPNEITYISVLSA 494
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 178/358 (49%), Gaps = 37/358 (10%)
Query: 123 LVEESRRLFR-GMKDKDSISWTTMIT-GLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
++ ++RR + + KD+ W ++I QN + A+ F M+ + + FTF ++
Sbjct: 1 MIGKTRRWYHCSISHKDTFHWNSLIAKNATQN--PQTALTFFTRMQAHAVPSNNFTFPAL 58
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM--AWK 238
L AC L L Q+HA++ R + F +ALVD Y KC YA VF M
Sbjct: 59 LKACAALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSV 118
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQ----RNGIE---PDDFTLGSVISSCA---NL 288
+VVSWTA++ Y NGC +EA K F M+ +G E D +LG+++S+CA
Sbjct: 119 DVVSWTALISAYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGS 178
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV--RDEVSWTA 346
L G+ HG + G + N++V Y C ++ + R+FN + + RD VSW +
Sbjct: 179 NCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNS 238
Query: 347 LVSGYAKFGKANETIDLFEKMLSHG---LKPDEVTLIGVLSACSRAGLVE---------K 394
L+SG+ G+A + FE M+S G ++P+ VT+I +L +C+ G VE
Sbjct: 239 LISGFTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYIS 298
Query: 395 GRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
RH ++ K+ + T ++D+ +R G L A+ + + + + W+ +++
Sbjct: 299 SRHSSLLVAKDVVV------LTALLDMHARCGNLALAREIFDGVE-GKNVVCWSAMIA 349
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/603 (37%), Positives = 340/603 (56%), Gaps = 36/603 (5%)
Query: 46 STMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPE 105
S +LI +S + R+IH + K F+G LV Y KLG
Sbjct: 43 SALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGY------------- 89
Query: 106 KNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM 165
E++ +LF M KD +SW ++I+G + ++ F M
Sbjct: 90 ------------------AEDALKLFDDMPHKDLVSWNSLISGFSR--CLHMSLTAFYTM 129
Query: 166 RLE-GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
+ E + ++ T S+++AC G AL+ GK IH F I+ V V ++L++MY K
Sbjct: 130 KFEMSVKPNEVTILSMISACNG--ALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGD 187
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ A +F + N VSW +++ NGC+ E + F M+R GIE D+ T+ +++ +
Sbjct: 188 LTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQA 247
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
C +L + HG TG + IT++ AL+ Y K G + S+ +F E+ D V+W
Sbjct: 248 CLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAW 307
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
TA+++GYA G E I LFE M + GL+PD VT +LSACS +GLV +G+ YF +M +
Sbjct: 308 TAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSE 367
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
YGI P DHY+CM+D+L R G L +A I MP P+A W LL +CR+HGN+E+GK
Sbjct: 368 VYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGK 427
Query: 465 WAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRV 524
AE L+ ++P +P +Y++LS++Y++ W +++R ++E+G+++ PG S I+Y ++
Sbjct: 428 EVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGYSSIEYGNKN 487
Query: 525 HIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLA 584
H F D S P +++IY++LE+L K+ K GY VL DVE K M+N HSEKLA
Sbjct: 488 HHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDVEEEVKEDMINKHSEKLA 547
Query: 585 IAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCG 644
IAFGLL G + + KNLR+C DCH+ K IS I +R I++RD RFH F +G CSC
Sbjct: 548 IAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIIIRDPKRFHHFSDGFCSCA 607
Query: 645 DFW 647
D+W
Sbjct: 608 DYW 610
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 182/392 (46%), Gaps = 38/392 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN LISG + ++ ++ + M + + +T +M+ S+ +D
Sbjct: 100 MPHKDLVSWNSLISGFSR--CLHMSLTAFYTMKFEMSVKPNEVTILSMI--SACNGALDA 155
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ IHG +K G V V + L++MY K G + A R F+ +P+ N V +N++I +
Sbjct: 156 GKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQV- 214
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
NG RE ID F +MR G+ D+ T ++
Sbjct: 215 ------------------------------TNGCAREGIDYFNKMRRLGIEQDEGTILAL 244
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L + + IH + + + +AL+D Y K + + VF + + +
Sbjct: 245 LQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADR 304
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQFHG 299
V+WTAML GY +G EA+K+F +M G+EPD T ++S+C++ + EG + F+
Sbjct: 305 VAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNV 364
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKAN 358
S V G+ + + +V G+CG + D++ + M + W AL+ G
Sbjct: 365 MSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIE 424
Query: 359 ETIDLFEKMLS-HGLKPDEVTLIGVLSACSRA 389
++ E +++ L P ++ + + SR+
Sbjct: 425 LGKEVAEHLINMEPLDPRNYIMLSNMYSASRS 456
>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
Length = 1280
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/533 (43%), Positives = 318/533 (59%), Gaps = 10/533 (1%)
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM-DQFTF 177
LR + SR L G D ++ I G R + L E+ LA+ D T+
Sbjct: 754 LRYAVAVLSRLLPHGPLDPFPLNTVLRIAA----GSPRPRVAL--ELHRRRLALPDTHTY 807
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
++ AC LLAL EG+ +HA +N VFV ++LV +Y C + A VF M
Sbjct: 808 PPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPV 867
Query: 238 K--NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
+ N+VSW +ML + NG E + +F M PD FT+ SV+++CA +L G
Sbjct: 868 RGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGALALGR 927
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALVSGYAKF 354
+ H GL+ VSNAL+ Y KCG++ D+ R+F EM + R VSWT+L+ G A
Sbjct: 928 RVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAAN 987
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G E ++LF M L P E+T++GVL ACS GLV+ G YF+ M ++YGI P +H
Sbjct: 988 GFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEH 1047
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
CM+D+L RAGR+EEA +I MP P+A+ W TLL SC +H +E+GK A E L+ELD
Sbjct: 1048 LGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKKLELGKVAWERLVELD 1107
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS 534
P + YVLLS++YA+ G W V LR+TM + VRK+PG S ++ ++ V+ F D S
Sbjct: 1108 PGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLVELRNSVYEFVMGDRSH 1167
Query: 535 PYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPP 594
P S+QIY L ++ ++ +EGY+P S+VL D+E EK LN+HSE+LAIAF LL P
Sbjct: 1168 PESEQIYEMLAEIAERLRREGYIPRTSNVLADIEEEEKETALNYHSERLAIAFALLKSLP 1227
Query: 595 GLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G+PIR++KNLR+C DCH A ISK+ REI+VRD RFH F+ G CSC D+W
Sbjct: 1228 GIPIRIIKNLRMCGDCHVAFNLISKVYDREIIVRDRSRFHHFQGGACSCKDYW 1280
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 143/299 (47%), Gaps = 32/299 (10%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +H K GF + VFV + LV +Y GL A + FDE+P
Sbjct: 823 GECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMP---------------- 866
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
++ ++ +SW +M+ NG E + +F EM A D FT SV
Sbjct: 867 -------------VRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSV 913
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW-KN 239
LTAC AL G+++H ++ + +N V +AL+D+Y KC S+ A +F M +
Sbjct: 914 LTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRT 973
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VVSWT+++VG NG +EA+++F M+R + P + T+ V+ +C++ +++G ++
Sbjct: 974 VVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFD 1033
Query: 300 RSLVT-GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGK 356
R G+ I +V G+ G +E+++ M + + V W L+ A K
Sbjct: 1034 RMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKK 1092
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 106/255 (41%), Gaps = 57/255 (22%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLML-----KDGLGNLSRITFSTMLIMSSSRRCVDLG 61
VSWN +++ A++G N+ + V+ ML DG T ++L + + LG
Sbjct: 873 VSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGF------TIVSVLTACAEFGALALG 926
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITGLLR 120
R++H ++ K G V + L+D+YAK G + DA+R F+E+ + +V + ++I G
Sbjct: 927 RRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVG--- 983
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
L NG +EA++LF M E L + T V
Sbjct: 984 ----------------------------LAANGFGKEALELFSLMEREKLVPTEITMVGV 1015
Query: 181 LTACG-------GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
L AC G + K+ + R +H +VD+ + ++ A
Sbjct: 1016 LYACSHCGLVDDGFRYFDRMKEDYGISPRIEHL------GCMVDLLGRAGRVEEAYDYII 1069
Query: 234 TMAWK-NVVSWTAML 247
TM + N V W +L
Sbjct: 1070 TMPLEPNAVVWRTLL 1084
>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g01510, mitochondrial; Flags: Precursor
gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 584
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 234/610 (38%), Positives = 353/610 (57%), Gaps = 35/610 (5%)
Query: 40 LSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRG 99
L++ S +L SSS+ ++IH +L+ GF + + L++ +G + A++
Sbjct: 8 LTKQMLSELLRASSSKP--KQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQV 65
Query: 100 FDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAI 159
FDE+ + I ++NT+ G +R N L E++
Sbjct: 66 FDEMHKPRIFLWNTLFKGYVR-------------------------------NQLPFESL 94
Query: 160 DLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMY 219
L+++MR G+ D+FT+ V+ A L G +HA +++ V + LV MY
Sbjct: 95 LLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMY 154
Query: 220 CKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLG 279
K + AE +F +M K++V+W A L Q G S A++ F M + ++ D FT+
Sbjct: 155 MKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVV 214
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
S++S+C L SLE G + + R+ + I V NA + + KCGN E + LF EM R
Sbjct: 215 SMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQR 274
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
+ VSW+ ++ GYA G + E + LF M + GL+P+ VT +GVLSACS AGLV +G+ YF
Sbjct: 275 NVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYF 334
Query: 400 EIMVK--EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIH 457
+MV+ + + P +HY CM+D+L R+G LEEA FI KMP PD W LL +C +H
Sbjct: 335 SLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVH 394
Query: 458 GNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSW 517
++ +G+ A+ L+E P + +VLLS+IYA+ GKWD V ++R MR+ G +K S
Sbjct: 395 RDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSS 454
Query: 518 IKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLN 577
++++ ++H F+ D S P S IY +L+++ +K+ K GYVPD SV HDVE+ EK L+
Sbjct: 455 VEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLS 514
Query: 578 HHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFK 637
HHSEKLAIAFGL+ PG PIRV+KNLR C DCH +K++S +T EI++RD RFH F+
Sbjct: 515 HHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFR 574
Query: 638 NGECSCGDFW 647
NG CSC +FW
Sbjct: 575 NGVCSCKEFW 584
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 162/357 (45%), Gaps = 54/357 (15%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN L G+ + +++ +Y M G+ T+ ++ S G +H H+
Sbjct: 77 WNTLFKGYVRNQLPFESLLLYKKMRDLGV-RPDEFTYPFVVKAISQLGDFSCGFALHAHV 135
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+K+GFG V + LV MY K G + A+
Sbjct: 136 VKYGFGCLGIVATELVMMYMKFGELSSAEF------------------------------ 165
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
LF M+ KD ++W + +Q G A++ F +M + + D FT S+L+ACG L
Sbjct: 166 -LFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLG 224
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
+LE G++I+ + + N+ V +A +DM+ KC + + A +F M +NVVSW+ M+V
Sbjct: 225 SLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIV 284
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
GY NG S EA+ +F MQ G+ P+ T V+S+C++ + EG ++ S
Sbjct: 285 GYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRY---------FS 335
Query: 309 FITVSN------------ALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYA 352
+ SN +V G+ G +E+++ +M V + W AL+ A
Sbjct: 336 LMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACA 392
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/649 (35%), Positives = 364/649 (56%), Gaps = 43/649 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVY----NLMLKDGLGNLSRITFSTMLIMSSSRR 56
MP D +SWN +ISG+ + + ++++ L + L ++ + S ++ R
Sbjct: 196 MPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSV-ISACELLGDER- 253
Query: 57 CVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMIT 116
LG Q+H ++++ + + NI +YN++I
Sbjct: 254 ---LGTQLHSYVVRTAY-------------------------------DGNISVYNSLIQ 279
Query: 117 GLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
L G +E+ +F GM+ +D +SWTT+I+G + N L +A++ ++ M + G D+ T
Sbjct: 280 MYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVT 339
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
SVL+AC L L+ G ++H R H V V ++L+DMY KCK I+ A +F +
Sbjct: 340 IASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIP 399
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
K+V+SWT+++ G N EA+ F M +P+ TL S +S+CA + +L G +
Sbjct: 400 DKDVISWTSVINGLRINNRCFEALIFFRKMILKS-KPNSVTLISALSACARVGALMCGKE 458
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H +L G+ + NA++ Y +CG + + FN +N +D +W L++GYA+ GK
Sbjct: 459 IHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFN-LNEKDVGAWNILLTGYAQKGK 517
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
++LF++M+ + PD+VT I +L ACSR+G+V +G YF+ M Y I P HY
Sbjct: 518 GAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYA 577
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY 476
C++D+L RAG+L EA FI +MP PD W LL++CRIH +V +G+ AA+ + + D
Sbjct: 578 CVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIHRHVLLGELAAQHIFKQDAE 637
Query: 477 NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPY 536
+ Y+LL ++YA GKWD V+++RRTM+E+G+ DPGCSW++ K +VH F + D P
Sbjct: 638 SIGYYILLCNLYADSGKWDEVAKVRRTMKEEGLIVDPGCSWVEVKGKVHAFLSGDNFHPQ 697
Query: 537 SDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGL 596
+I LE KM G+ S + ++ S K + HSE+ AIA+ L+ PG+
Sbjct: 698 MQEINVVLEGFYEKMKTSGFNGQECSSMDGIQTS-KADIFCGHSERQAIAYSLINSAPGM 756
Query: 597 PIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGD 645
PI V KNL +C CH+ K+ISKI +REI VRD +FH FK+G CSCGD
Sbjct: 757 PIWVTKNLYMCQSCHSTVKFISKIVRREISVRDTEQFHHFKDGLCSCGD 805
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 144/480 (30%), Positives = 239/480 (49%), Gaps = 52/480 (10%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D SWN+L+ G+ G ++A+ +Y+ +L G+ TF ++L + + GR++
Sbjct: 99 DLFSWNVLVGGYTKAGFFDEALCLYHRILWAGI-RPDVYTFPSVLRSCAGAMDLVRGREV 157
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H H+++F F V V + L+ MY K G + A
Sbjct: 158 HAHVVRFDFDMDVDVVNALITMYVKCGDVVSA---------------------------- 189
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
R LF M +D ISW MI+G +N E ++LF MR + D T SV++AC
Sbjct: 190 ---RMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISAC 246
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L G Q+H++++R + N+ V ++L+ MY K AESVF M ++VVSWT
Sbjct: 247 ELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWT 306
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++ G N ++A++ + M+ G PD+ T+ SV+S+CA+L L+ G + H + T
Sbjct: 307 TIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERT 366
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G I ++ V+N+L+ Y KC IE + +F+++ +D +SWT++++G + E + F
Sbjct: 367 GHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFF 426
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR----HYFEIMVKEYGIRPIHDHYTCMID 420
KM+ KP+ VTLI LSAC+R G + G+ H + + G P ++D
Sbjct: 427 RKMILKS-KPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLP-----NAILD 480
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIG-WATLLSSCRIHGN----VEIGKWAAESLLELDP 475
+ R GR+ A +N+ +G W LL+ G +E+ K ES E++P
Sbjct: 481 LYVRCGRMRTA---LNQFNLNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVES--EINP 535
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 202/389 (51%), Gaps = 22/389 (5%)
Query: 85 DMYAKLGLIYDAKRGFDE------------LPEKNIVMYNTMITGLLRRGLVEESRRLFR 132
D + L + + KRG+ E + ++ + N +++ +R G V + +F
Sbjct: 34 DCFVALIRLCENKRGYSEGEYVWKAVLSSLVTLLSVRLGNALLSMFVRFGDVGNAWNVFG 93
Query: 133 GMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEE 192
M ++D SW ++ G + G EA+ L+ + G+ D +TF SVL +C G + L
Sbjct: 94 RMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVR 153
Query: 193 GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
G+++HA ++R D +V V +AL+ MY KC + A +F M ++ +SW AM+ GY +
Sbjct: 154 GREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFE 213
Query: 253 NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITV 312
N E +++F M+ I+PD T+ SVIS+C L GTQ H + T I+V
Sbjct: 214 NDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISV 273
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGL 372
N+L+ Y G+ +++ +F+ M RD VSWT ++SG ++ ++ ++ M G
Sbjct: 274 YNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGT 333
Query: 373 KPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC----MIDILSRAGRL 428
PDEVT+ VLSAC+ G ++ G + + E R H Y +ID+ S+ R+
Sbjct: 334 MPDEVTIASVLSACASLGQLDMG-----MKLHELAERTGHILYVVVANSLIDMYSKCKRI 388
Query: 429 EEAKSFINKMPFPPDAIGWATLLSSCRIH 457
E+A +++P D I W ++++ RI+
Sbjct: 389 EKALEIFHQIP-DKDVISWTSVINGLRIN 416
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 105/202 (51%), Gaps = 5/202 (2%)
Query: 253 NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITV 312
+G E+A+K +MQ I ++ ++I C N EG ++ +++++ L++ ++V
Sbjct: 11 SGNLEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEG-EYVWKAVLSSLVTLLSV 69
Query: 313 --SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH 370
NAL++ + + G++ ++ +F M RD SW LV GY K G +E + L+ ++L
Sbjct: 70 RLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWA 129
Query: 371 GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEE 430
G++PD T VL +C+ A + +GR +V+ + D +I + + G +
Sbjct: 130 GIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVR-FDFDMDVDVVNALITMYVKCGDVVS 188
Query: 431 AKSFINKMPFPPDAIGWATLLS 452
A+ +KMP D I W ++S
Sbjct: 189 ARMLFDKMP-TRDRISWNAMIS 209
>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
Length = 830
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 237/645 (36%), Positives = 355/645 (55%), Gaps = 46/645 (7%)
Query: 12 LISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI-LK 70
LI +HG + A L GL ++ T+ ++L+ ++ R L +H +
Sbjct: 223 LIQMLCAHGRLAQATA-----LLQGLPAPTQRTYESLLLAAARARDTALAAAVHRRLEAD 277
Query: 71 FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRL 130
F S F+ + L++ YA L + A++ FDE P KNI ++N M+ L
Sbjct: 278 PVFRSDPFLSTRLIEAYAALSALPAARQVFDEAPVKNIFVWNAMLKAL------------ 325
Query: 131 FRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC-----G 185
L +G EA+ +M G+ +D +++ L AC
Sbjct: 326 -----------------ALADHG--EEALTCLADMGRLGVPVDSYSYAHGLKACIAASAS 366
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
L A +++HA IR + + V + L+D Y K + YAE VF +M +N+VSW+A
Sbjct: 367 HLPASARVREMHAHAIRRGYGLHTHVATTLIDCYAKLGIVSYAERVFTSMPDRNLVSWSA 426
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIE--PDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
M+ Y +N +A++IF M + + P+ T+ SV+ +CA + +L +G H L
Sbjct: 427 MIGCYAKNERPGDAIQIFQEMMASDADLVPNSITIVSVLHACAGVNALGQGKVLHAYILR 486
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEM-NVRDEVSWTALVSGYAKFGKANETID 362
G ++V NAL+ Y KCG +E +FN + R+ VSW +L+SGY G E++
Sbjct: 487 RGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGRESLQ 546
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL 422
+FE+M+ G+ P+ +T + VL ACS GLVE+G+ FE MV EY + P +HY CM+D+L
Sbjct: 547 VFEEMIEEGISPNIITFVSVLGACSHVGLVEQGKKLFESMV-EYNVTPRAEHYACMVDLL 605
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYV 482
RAGRL+EA I M P W +LL +CRIHG+VE + A L +L+P N +YV
Sbjct: 606 GRAGRLDEAVELIQSMRIQPSPQVWGSLLGACRIHGHVEYAEMACSHLFDLEPRNAGNYV 665
Query: 483 LLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYA 542
LL+ IYA + V L+ + E + K PGCSWI+ K +++ F + D +P +++ A
Sbjct: 666 LLADIYARAKLQNQVDVLKELLEEHALEKVPGCSWIEVKKKLYSFVSVDNKNPQVEELQA 725
Query: 543 ELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVK 602
+ + +M EGYVPD SVL+D+E EK ++L HSEKLA+AFGL+ G IR+ K
Sbjct: 726 LIGEFVTQMKNEGYVPDTRSVLYDIEEEEKERILLGHSEKLAVAFGLIKTGSGEAIRITK 785
Query: 603 NLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
NLR+C DCH+ TK+ISK T REI+VRD RFH F+NG CSC D+W
Sbjct: 786 NLRLCEDCHSVTKFISKFTDREIVVRDVNRFHHFRNGVCSCRDYW 830
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 154/353 (43%), Gaps = 57/353 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYN-LMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
MP + VSW+ +I +A + DA++++ +M D + IT ++L + +
Sbjct: 416 MPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSITIVSVLHACAGVNALG 475
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL-PEKNIVMYNTMITGL 118
G+ +H +IL+ GF V V + L+ MY K G + + F+ + +N+V +N++I+G
Sbjct: 476 QGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGY 535
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
GM +G RE++ +F EM EG++ + TF
Sbjct: 536 --------------GM-----------------HGFGRESLQVFEEMIEEGISPNIITFV 564
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
SVL AC + +E+GK++ ++ + + +VD+ + + A + ++M +
Sbjct: 565 SVLGACSHVGLVEQGKKLFESMVEYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQ 624
Query: 239 NVVS-WTAML--------VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
W ++L V Y + CS +F RN ++ L + I + A L
Sbjct: 625 PSPQVWGSLLGACRIHGHVEYAEMACSH----LFDLEPRNA---GNYVLLADIYARAKLQ 677
Query: 290 S----LEEGTQFHGRSLVTGLISFITVSNALVTFYG---KCGNIEDSHRLFNE 335
+ L+E + H V G S+I V L +F K +E+ L E
Sbjct: 678 NQVDVLKELLEEHALEKVPG-CSWIEVKKKLYSFVSVDNKNPQVEELQALIGE 729
>gi|357126224|ref|XP_003564788.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Brachypodium distachyon]
Length = 515
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/509 (39%), Positives = 320/509 (62%), Gaps = 1/509 (0%)
Query: 140 ISWTTMITGLMQNGLEREAIDLFREMRL-EGLAMDQFTFGSVLTACGGLLALEEGKQIHA 198
+++ I+ + GL + A+ LF EMR GL D++TF +L + L +HA
Sbjct: 7 VAYNAAISRCSRAGLHQRALALFHEMRAARGLPADEYTFPPILNSAALLRVPAAADALHA 66
Query: 199 FIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEE 258
++R ++ V +ALVD Y K A ++F M ++VV+WT++L G ++G +
Sbjct: 67 LLLRAGLVAHLHVANALVDAYAKLSRGGAARALFDEMPRRDVVTWTSLLTGLARSGSHDA 126
Query: 259 AVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVT 318
A++++ +M +G+EPD++ + + +SSCA +LE G H ++ GL F++V N+LV+
Sbjct: 127 ALRVYRDMVASGVEPDEYVVAAALSSCAGSTTLELGQSVHATAVRLGLEPFLSVGNSLVS 186
Query: 319 FYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVT 378
Y K G++ ++ ++F+ +R V+WTAL+ GYA+ G+ E++ ++ +M+ G +PD VT
Sbjct: 187 MYAKTGSLREARKVFDATRLRCPVTWTALIVGYAQNGRGEESLQVYAEMVHSGCRPDYVT 246
Query: 379 LIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
IG+L ACS AGLV+ GR +F+ M ++GI P DHY CM+D+L RAGRL+EA +++
Sbjct: 247 FIGLLFACSHAGLVDAGRAHFKSMQADHGITPGPDHYACMVDVLGRAGRLDEAMELLDQS 306
Query: 439 PFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVS 498
DA W LL +CR H N E+ + AAE + LDP + Y++LS++Y+ + +W V+
Sbjct: 307 TMKLDATVWKALLGACRTHRNAELAERAAEMVWRLDPTDAVPYIMLSNLYSRERRWSDVA 366
Query: 499 QLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVP 558
++R M+ +G+ K+PGCSW+ H+F +D P +D+IY ++E++ K+ EG+V
Sbjct: 367 RIRTLMKSRGIAKEPGCSWVVASGVTHLFYVEDRGHPRTDEIYRKVEEMMEKVRAEGFVA 426
Query: 559 DMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYIS 618
D L D + K L HHSE+LA+AFGLL +P G P+RV KNLRVC DCH A K ++
Sbjct: 427 DTDWALQDEAPEGREKGLAHHSERLAVAFGLLALPAGAPVRVFKNLRVCGDCHVAIKMVA 486
Query: 619 KITQREILVRDAVRFHLFKNGECSCGDFW 647
K+ REI++RD+ FH ++G CSCGD+W
Sbjct: 487 KVYGREIILRDSNCFHHMRDGVCSCGDYW 515
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 169/346 (48%), Gaps = 35/346 (10%)
Query: 6 GVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIH 65
GV++N IS + G A+ +++ M TF +L ++ R +H
Sbjct: 6 GVAYNAAISRCSRAGLHQRALALFHEMRAARGLPADEYTFPPILNSAALLRVPAAADALH 65
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
+L+ G +++ V + LVD YAKL A+ FDE+P +++
Sbjct: 66 ALLLRAGLVAHLHVANALVDAYAKLSRGGAARALFDEMPRRDV----------------- 108
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
++WT+++TGL ++G A+ ++R+M G+ D++ + L++C
Sbjct: 109 --------------VTWTSLLTGLARSGSHDAALRVYRDMVASGVEPDEYVVAAALSSCA 154
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
G LE G+ +HA +R + + VG++LV MY K S++ A VF + V+WTA
Sbjct: 155 GSTTLELGQSVHATAVRLGLEPFLSVGNSLVSMYAKTGSLREARKVFDATRLRCPVTWTA 214
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT- 304
++VGY QNG EE+++++ M +G PD T ++ +C++ A L + + H +S+
Sbjct: 215 LIVGYAQNGRGEESLQVYAEMVHSGCRPDYVTFIGLLFACSH-AGLVDAGRAHFKSMQAD 273
Query: 305 -GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALV 348
G+ +V G+ G ++++ L ++ ++ D W AL+
Sbjct: 274 HGITPGPDHYACMVDVLGRAGRLDEAMELLDQSTMKLDATVWKALL 319
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 113/245 (46%), Gaps = 14/245 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V+W L++G A GS + A++VY M+ G+ + L + ++L
Sbjct: 103 MPRRDVVTWTSLLTGLARSGSHDAALRVYRDMVASGV-EPDEYVVAAALSSCAGSTTLEL 161
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +H ++ G ++ VG+ LV MYAK G + +A++ FD + V + +I G +
Sbjct: 162 GQSVHATAVRLGLEPFLSVGNSLVSMYAKTGSLREARKVFDATRLRCPVTWTALIVGYAQ 221
Query: 121 RGLVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQF 175
G EES +++ M D +++ ++ GL F+ M+ + G+
Sbjct: 222 NGRGEESLQVYAEMVHSGCRPDYVTFIGLLFACSHAGLVDAGRAHFKSMQADHGITPGPD 281
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT- 234
+ ++ G L+E ++ + ++ K + V AL+ C++ + AE R
Sbjct: 282 HYACMVDVLGRAGRLDEAMEL---LDQSTMKLDATVWKALLG---ACRTHRNAELAERAA 335
Query: 235 -MAWK 238
M W+
Sbjct: 336 EMVWR 340
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/643 (34%), Positives = 358/643 (55%), Gaps = 63/643 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+WN L+SGH HG + + + M +G S + +++L S +++G++
Sbjct: 334 DIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSS-SMTSVLQAISELGFLNMGKET 392
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG++L+ GF V+VG+ L+DMY K + A+ FD + +NI
Sbjct: 393 HGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNI---------------- 436
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+W ++++G G+ +A+ L +M EG+ D T+ +++
Sbjct: 437 ---------------FAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMIS-- 479
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G GK+ A + + KS+ NVVSWT
Sbjct: 480 -GYAMWGCGKEALAVLHQT-------------------KSLGLTP---------NVVSWT 510
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
A++ G Q G + +++K F MQ+ G+ P+ ++ ++ +CA+L+ L++G + H S+
Sbjct: 511 ALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRN 570
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G I + V+ AL+ Y K +++++H++F + + SW ++ G+A FG E I +F
Sbjct: 571 GFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVF 630
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+M G+ PD +T +LSAC +GL+ +G YF+ M+ +Y I P +HY CM+D+L R
Sbjct: 631 NEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGR 690
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG L+EA I+ MP PDA W LL SCRIH N++ + AA++L +L+P N A+Y+L+
Sbjct: 691 AGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILM 750
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
++Y+ +W+ + LR M GVR SWI+ RVH+FS+D+ P + +IY EL
Sbjct: 751 MNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFEL 810
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
+L +M K GYVPD++ V +++ EK K+L H+EKLAI +GL+ + G PIRV+KN
Sbjct: 811 YQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNT 870
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R+CSDCH+A KYIS + RE+ +RD VRFH F+ G+CSC DFW
Sbjct: 871 RICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 913
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 123/499 (24%), Positives = 218/499 (43%), Gaps = 76/499 (15%)
Query: 7 VSWNLLISG-HASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIH 65
+ WN + +S GS++ ++V+ + G+ S + +S L + + LG +IH
Sbjct: 98 LKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEV-YSVALKTCTRVMDIWLGMEIH 156
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
G ++K GF V++ L++ Y + + A + F E+P +++N I L
Sbjct: 157 GCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAII------LNL 210
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
+S +L +G ++LFR+M+ L + T VL ACG
Sbjct: 211 QSEKLQKG-------------------------VELFRKMQFSFLKAETATIVRVLQACG 245
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM---------- 235
+ AL KQIH ++ R +V + + L+ MY K ++ A VF +M
Sbjct: 246 KMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNS 305
Query: 236 -------------AWK------------NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
AW ++V+W +L G+ +G EE + I MQ G
Sbjct: 306 MISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEG 365
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
+P+ ++ SV+ + + L L G + HG L G + V +L+ Y K ++ +
Sbjct: 366 FKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQ 425
Query: 331 RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
+F+ M R+ +W +LVSGY+ G + + L +M G+KPD VT G++S + G
Sbjct: 426 AVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWG 485
Query: 391 LVEKGRHYFEIM--VKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP---FPPDAI 445
G+ ++ K G+ P +T +I S+AG ++ F +M P++
Sbjct: 486 C---GKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSA 542
Query: 446 GWATLLSSCRIHGNVEIGK 464
LL +C ++ GK
Sbjct: 543 SITCLLRACASLSLLQKGK 561
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 176/359 (49%), Gaps = 11/359 (3%)
Query: 159 IDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDM 218
+++F+E+ +G+ D + L C ++ + G +IH +I+ +V++ AL++
Sbjct: 118 LEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNF 177
Query: 219 YCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
Y +C ++ A VF M + W ++ Q+ ++ V++F MQ + ++ + T+
Sbjct: 178 YGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATI 237
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
V+ +C + +L Q HG GL S +++ N L++ Y K G +E + R+F+ M
Sbjct: 238 VRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMEN 297
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
R+ SW +++S YA G N+ LF ++ S +KPD VT +LS G E+ +
Sbjct: 298 RNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNI 357
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRL---EEAKSFINKMPFPPDA-IGWATLLSSC 454
+ M E G +P T ++ +S G L +E ++ + F D +G + +
Sbjct: 358 LQRMQGE-GFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYV 416
Query: 455 RIHGNVEIGKWAAESLLE-LDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKD 512
+ H +A+++ + + N ++ L S Y+ KG ++ +L M ++G++ D
Sbjct: 417 KNHSLT-----SAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPD 470
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/600 (38%), Positives = 350/600 (58%), Gaps = 30/600 (5%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN +I G++ S A+ Y ML G+ + TF +L + G+QIHGH+
Sbjct: 100 WNTMIRGNSLSSSPVGAIDFYVRMLLCGV-EPNSYTFPFLLKSCAKVGATQEGKQIHGHV 158
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
LK G S FV + L++MYA+ G + A+ F + ++ V + +ITG RG ++++R
Sbjct: 159 LKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDAR 218
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
RLF + +D++SW MI G Q+G EA+ F+EM+ +A ++ T +VL+AC
Sbjct: 219 RLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSG 278
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
+LE G + ++I + N+ + +AL+DMY KC + A +F + K+++SW M+
Sbjct: 279 SLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIG 338
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG--RSLVTGL 306
GY +EA+ +F MQ++ +EP+D T S++ +CA L +L+ G H GL
Sbjct: 339 GYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGL 398
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ ++ +L+ Y KCGNIE + ++F M + SW A++SG A G AN ++LF +
Sbjct: 399 TN-TSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQ 457
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M G +PD++T +GVLSACS AGLVE GR F MV++Y I P HY CMID+L RAG
Sbjct: 458 MRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAG 517
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+EA++ + M PD W +LL +CR+HGNVE+G++AA+ L EL+P NP +YVLLS+
Sbjct: 518 LFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSN 577
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IYA+ G+WD V+++R + +KG++K IY L++
Sbjct: 578 IYATAGRWDDVARIRTKLNDKGMKK-------------------------XQDIYKMLDE 612
Query: 547 LNRKM-IKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
+++ + G VPD S VL+D++ K L+HHSEKLAIAFGL+ P IR+VKNLR
Sbjct: 613 IDQSFGERPGXVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKNLR 672
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 196/452 (43%), Gaps = 94/452 (20%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VSWN +I+G+A G +A+ + M + + + T T+L + ++L
Sbjct: 224 IPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAP-NESTMVTVLSACAQSGSLEL 282
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G + I G GS + + + L+DMY+K G + A+ F+ + EK+I+ +N MI G
Sbjct: 283 GNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSH 342
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+E A+ LFR+M+ + + TF S+
Sbjct: 343 MNSYKE-------------------------------ALALFRKMQQSNVEPNDVTFVSI 371
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHK----DNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
L AC L AL+ GK IHA+I D K N + ++L+DMY KC +I+ A+ VF M
Sbjct: 372 LPACAYLGALDLGKWIHAYI---DKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMK 428
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
K++ SW AM+ G +G + A+++F M+ G EPDD T V+S+C++ +E
Sbjct: 429 PKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVE---- 484
Query: 297 FHGRSLVTGLISFITVSNAL------VTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
GR + ++ +S L + G+ G +++ L M
Sbjct: 485 -LGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNME------------- 530
Query: 351 YAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG----RHYFEIMVKEY 406
+KPD +L AC G VE G +H FE+ +
Sbjct: 531 ---------------------MKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENP 569
Query: 407 GIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
G Y + +I + AGR ++ K+
Sbjct: 570 GA------YVLLSNIYATAGRWDDVARIRTKL 595
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 176/401 (43%), Gaps = 75/401 (18%)
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK---SIKYAESVFRTM 235
++L+ C L KQIH+ II+ + F S L++ +C ++ YA +F ++
Sbjct: 37 TLLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIE-FCAISPFGNLSYALLLFESI 92
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
N W M+ G + A+ + M G+EP+ +T ++ SCA + + +EG
Sbjct: 93 EQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGK 152
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS------ 349
Q HG L GL S V +L+ Y + G + + +F++ ++RD VS+TAL++
Sbjct: 153 QIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRG 212
Query: 350 -------------------------GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
GYA+ G+ E + F++M + P+E T++ VLS
Sbjct: 213 CLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLS 272
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSF---------- 434
AC+++G +E G ++ ++++G+ +ID+ S+ G L++A+
Sbjct: 273 ACAQSGSLELG-NWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDII 331
Query: 435 ------------------------INKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL 470
+ + P+ + + ++L +C G +++GKW +
Sbjct: 332 SWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYI 391
Query: 471 LE--LDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
+ L N + + L +YA G + Q+ M+ K +
Sbjct: 392 DKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSL 432
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/582 (37%), Positives = 331/582 (56%), Gaps = 39/582 (6%)
Query: 97 KRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLER 156
+ G D P N + + + G ++ S LF ++ WT +I G GL
Sbjct: 55 RHGLDHHPILNFKLQRSYAS----LGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHE 110
Query: 157 EAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALV 216
+A++ + +M +G+ + FTF S+L C +E GK +H+ ++ +++V + L+
Sbjct: 111 QALNFYAQMLTQGVEPNAFTFSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLL 166
Query: 217 DMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV---------------------------- 248
D+Y + + A+ +F TM K++VS TAML
Sbjct: 167 DVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNV 226
Query: 249 ---GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
GY QNG EA+ +F M + +P++ T+ SV+S+C L +LE G H G
Sbjct: 227 MIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNG 286
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
+ + V ALV Y KCG++ED+ +F++++ +D V+W +++ GYA G + E + LF+
Sbjct: 287 IQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFK 346
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
M GL P +T IG+LSAC +G V +G F M EYGI P +HY CM+++L RA
Sbjct: 347 SMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRA 406
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
G +E+A + M PD + W TLL +CR+HG + +G+ E L++ + N +Y+LLS
Sbjct: 407 GHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLS 466
Query: 486 SIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELE 545
+IYA+ G WD V++LR M++ GV+K+PGCS I+ ++VH F A + P +IY LE
Sbjct: 467 NIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLE 526
Query: 546 KLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
++N + GY P VLHD+ +EK + L HSEKLAIAFGL+ PG I++VKNLR
Sbjct: 527 EINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLR 586
Query: 606 VCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VC+DCH TK ISKIT R+I+VRD RFH F NG CSCGD+W
Sbjct: 587 VCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 628
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 94/172 (54%), Gaps = 5/172 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M DGV WN++I G+ +G N+A+ ++ MLK + +T ++L ++
Sbjct: 216 MEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLK-AKAKPNEVTVLSVLSACGQLGALES 274
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +H +I G V VG+ LVDMY+K G + DA+ FD++ +K++V +N+MI G
Sbjct: 275 GRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAM 334
Query: 121 RGLVEESRRLFRGM----KDKDSISWTTMITGLMQNGLEREAIDLFREMRLE 168
G +E+ +LF+ M +I++ +++ +G E D+F +M+ E
Sbjct: 335 HGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDE 386
>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
Length = 564
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/528 (40%), Positives = 328/528 (62%), Gaps = 3/528 (0%)
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGL-EREAIDLFREMRLEGLA-MDQFTFGS 179
G ++ +R+LF ++ + SW +MI G Q+ +E + LFR+M G + FT
Sbjct: 38 GDIDYARKLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAF 97
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL AC + ALEEG+Q+HA ++++ + FV +ALV+ Y KC+ I A VF + +N
Sbjct: 98 VLKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRN 157
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+V+W+ M+ GY + G EA+ +F +MQ+ G+ PD+ T+ SVIS+CA +L+ G H
Sbjct: 158 LVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHA 217
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ + + +S ALV Y KCG IE + +F+ M V+D +W++++ G A G A +
Sbjct: 218 YINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAED 277
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
++ F +M +KP+ VT IGVLSAC+ +GLV +GR Y+ M+ E+GI P + Y CM+
Sbjct: 278 ALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSML-EFGIVPSMELYGCMV 336
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L RA +E+A + + MP P+ + W TLL C+ N++ + A+ LLEL+P+N
Sbjct: 337 DLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKNLDKSEVVAQRLLELEPHNAE 396
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+Y+LLS++YAS +W+ +SQ+R+ M+ G++ PGCS I+ VH F DWS P + +
Sbjct: 397 NYILLSNLYASMSQWEKMSQVRKKMKGMGIKAVPGCSSIEVDGLVHEFVMGDWSHPEAME 456
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
+ L +++++ G+ P +S VLH+V EK L HSE+LAIA+GLL + IR
Sbjct: 457 VREILRDISKRVHAVGHQPGISDVLHNVVDEEKENALCEHSERLAIAYGLLKTKTPMAIR 516
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+VKNLRVC DCH TK IS +REI+VRD VRFH F NG CSC DFW
Sbjct: 517 IVKNLRVCGDCHEVTKIISAEYRREIIVRDRVRFHKFVNGSCSCRDFW 564
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 187/363 (51%), Gaps = 33/363 (9%)
Query: 8 SWNLLISG-HASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
SWN +I G S + V ++ M++ G N + T + +L S ++ G+Q+H
Sbjct: 57 SWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQVHA 116
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++LK GFGS FV + LV+ YAK I A + FDE+ ++N+V ++TMI+G R GLV E
Sbjct: 117 NVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVNE 176
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+ LFR M+ G+ D+ T SV++AC
Sbjct: 177 ALGLFRDMQKA-------------------------------GVVPDEVTMVSVISACAA 205
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
AL+ GK +HA+I + + ++ + +ALV+MY KC I+ A+ VF M K+ +W++M
Sbjct: 206 SGALDTGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSM 265
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+VG NG +E+A++ F M+ ++P+ T V+S+CA+ + EG ++ L G+
Sbjct: 266 IVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSMLEFGI 325
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKANETIDLFE 365
+ + + +V + +ED+ L M + + V W L+ G K +++ + +
Sbjct: 326 VPSMELYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKNLDKSEVVAQ 385
Query: 366 KML 368
++L
Sbjct: 386 RLL 388
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 115/244 (47%), Gaps = 33/244 (13%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V+W+ +ISG+A G VN+A+ ++ M K G+ +T +++ ++ +D G+ +H
Sbjct: 159 VAWSTMISGYARIGLVNEALGLFRDMQKAGVVP-DEVTMVSVISACAASGALDTGKWVHA 217
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+I K + + + + LV+MYAK G I AK FD +P K+ +++MI G
Sbjct: 218 YINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVG--------- 268
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
L NGL +A++ F M + + TF VL+AC
Sbjct: 269 ----------------------LAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAH 306
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK-NVVSWTA 245
+ EG++ + ++ ++ + +VD+ C+ ++ A ++ TM N V W
Sbjct: 307 SGLVSEGRRYWSSMLEFGIVPSMELYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRT 366
Query: 246 MLVG 249
+LVG
Sbjct: 367 LLVG 370
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D +W+ +I G A +G DA++ + +++ + +TF +L + V
Sbjct: 254 MPVKDTKAWSSMIVGLAINGLAEDALEEF-FRMEEAKVKPNHVTFIGVLSACAHSGLVSE 312
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITG 117
GR+ +L+FG + + +VD+ + L+ DA + +P N V++ T++ G
Sbjct: 313 GRRYWSSMLEFGIVPSMELYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVG 370
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/641 (36%), Positives = 343/641 (53%), Gaps = 66/641 (10%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V +N++I + ++G DA+ V+ M G T+ +L S + +G QIHG
Sbjct: 103 VFFNVMIRSYVNNGLYQDALLVFKTMANQGFYP-DNYTYPCVLKACSVSGNLWVGLQIHG 161
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++K G +++G+ LV MY K + A+R DE+P
Sbjct: 162 AVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMP---------------------- 199
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+D +SW +M+ G QNG +A+ L REM L D T GS+L A
Sbjct: 200 ---------GRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPA--- 247
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+ N DNV Y + +F + K+++SW M
Sbjct: 248 --------------VTNTSCDNVL----------------YVKDMFVKLKEKSLISWNVM 277
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ Y N EAV ++ MQ +G+EPD ++ SV+ +C +L++ G + H L
Sbjct: 278 IAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKL 337
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ + NAL+ Y KCG ++++ +F++M RD VSWT+++S Y G+ + + LF+K
Sbjct: 338 RPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKK 397
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M G PD + + VL+ACS AGLV++GR+ F +M EYGI P +HY CM+D+L RAG
Sbjct: 398 MRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMA-EYGITPGIEHYNCMVDLLGRAG 456
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+++EA +MP P+ W +LLS+CR++ ++ I AA+ L +L P YVLLS+
Sbjct: 457 KIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSN 516
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IYA G+W V +R M KG++K PG S ++ V+ F A D S S +IY L
Sbjct: 517 IYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIYKALGV 576
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
L +M + GY+P+ S LHDVE +K L HSEKLAI F +L PG IR+ KN+RV
Sbjct: 577 LVGRMKELGYMPETDSALHDVEEEDKECHLAVHSEKLAIVFAILNTKPGSTIRITKNIRV 636
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCH ATK ISKI +REI++RD RFH F++G CSCGD+W
Sbjct: 637 CGDCHVATKLISKIAEREIIIRDTHRFHHFRDGVCSCGDYW 677
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 164/333 (49%), Gaps = 35/333 (10%)
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+R +F + DK+ + + MI + NGL ++A+ +F+ M +G D +T+ VL AC
Sbjct: 90 TRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSV 149
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L G QIH +++ N+++G+ LV MY KCK + A V M +++VSW +M
Sbjct: 150 SGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSM 209
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ GY QNG +A+K+ M+ ++PD T+GS++ + N +
Sbjct: 210 VAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTS----------------- 252
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
C N+ +F ++ + +SW +++ Y NE +DL+ +
Sbjct: 253 ----------------CDNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQ 296
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M HG++PD V++ VL AC GR E V+ +RP +ID+ ++ G
Sbjct: 297 MQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHE-YVERKKLRPNLLLENALIDMYAKCG 355
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
L+EA++ ++M F D + W +++S+ + G
Sbjct: 356 CLKEARAVFDQMMF-RDVVSWTSMISAYGMSGQ 387
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 161/365 (44%), Gaps = 43/365 (11%)
Query: 194 KQIHA-FIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
K++H+ +I + N +G L+ Y C Y +F + KNVV + M+ Y
Sbjct: 55 KKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVN 114
Query: 253 NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITV 312
NG ++A+ +F M G PD++T V+ +C+ +L G Q HG + GL + +
Sbjct: 115 NGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYI 174
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGL 372
N LV+ YGKC ++ + R+ +EM RD VSW ++V+GYA+ G+ N+ + L +M L
Sbjct: 175 GNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKL 234
Query: 373 KPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAK 432
KPD T+ +L A + + + ++ VK I + MI + EA
Sbjct: 235 KPDAGTMGSLLPAVTNTS-CDNVLYVKDMFVKLKEKSLI--SWNVMIAVYVNNAMPNEAV 291
Query: 433 SFINKMP---FPPDAIGWATLLSSC----------RIHGNVEIGKWAAESLLE---LDPY 476
+M PDA+ +++L +C RIH VE K LLE +D Y
Sbjct: 292 DLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMY 351
Query: 477 -------------------NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSW 517
+ S+ + S Y G+ L + MR+ G D W
Sbjct: 352 AKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPD----W 407
Query: 518 IKYKS 522
I + S
Sbjct: 408 IAFVS 412
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 2/118 (1%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M F D VSW +IS + G DAV ++ M G I F ++L S VD
Sbjct: 367 MMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGF-TPDWIAFVSVLAACSHAGLVDE 425
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITG 117
GR + ++G + + +VD+ + G I +A ++P E N ++ ++++
Sbjct: 426 GRYCFNLMAEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSA 483
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/575 (39%), Positives = 327/575 (56%), Gaps = 33/575 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP S+N +I G+A A+K + L+LK GLG IT S L +S R
Sbjct: 343 MPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLG-FDEITLSGALNACASIRGDLE 401
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+HG +K S + V + ++DMY K
Sbjct: 402 GRQVHGLAVKSISMSNICVANAILDMYGKC------------------------------ 431
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ L E S LF M+ +D++SW +I QNG E E + F M + D FT+GSV
Sbjct: 432 KALAEASD-LFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSV 490
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC G AL G +IH II++ + FVG+ALVDMYCKC I+ A+ + K +
Sbjct: 491 LKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTM 550
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW A++ G+ SE+A K F M G+ PD+FT +V+ +CANLA++ G Q H +
Sbjct: 551 VSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQ 610
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ L S + + + LV Y KCGN++DS +F + RD V+W A++ GYA G E
Sbjct: 611 IIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEA 670
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LFE M +KP+ T + VL AC+ GLV+KG HYF++M+ EYG+ P +HY+CM+D
Sbjct: 671 LKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVD 730
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
IL R+GR++EA + + KMPF DA+ W LLS C+IHGNVE+ + A +LL+LDP + ++
Sbjct: 731 ILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRALLQLDPQDSSA 790
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
VLLS+IYA G W +VS++R+ MR ++K+PGCSWI+ K VH F D P ++I
Sbjct: 791 CVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPGCSWIELKDEVHAFLVGDKGHPRDEEI 850
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKM 575
Y +L L +M GY+PD VL D E+ E ++
Sbjct: 851 YEKLGVLIGEMQSVGYIPD-CDVLLDEEVEEPAQL 884
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 133/418 (31%), Positives = 224/418 (53%), Gaps = 2/418 (0%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
TFS + S + ++ G+Q H ++ GF FV + L+ MY K + A + FD++
Sbjct: 51 TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
+++V YN++I+G G ++ +R+ F M ++D +SW ++I+G +QNG R++ID+F
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFL 170
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
EM G+ D+ + VL ACG L + G Q+H +++ +V GSAL+ MY KCK
Sbjct: 171 EMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCK 230
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
+ + SVF + KN VSW+AM+ G QN + E +++F MQ G+ S+
Sbjct: 231 RLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFR 290
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
SCA L++L G + H +L + S I V A + Y KCG + D+ ++ + M S
Sbjct: 291 SCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQS 350
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
+ A++ GYA+ + + + F+ +L GL DE+TL G L+AC+ +GR + V
Sbjct: 351 YNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAV 410
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
K + I ++D+ + L EA + M DA+ W ++++C +GN E
Sbjct: 411 KSISMSNIC-VANAILDMYGKCKALAEASDLFDMME-RRDAVSWNAIIAACEQNGNEE 466
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 242/486 (49%), Gaps = 41/486 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + VSW+ +I+G + + ++++ M G+G +S+ ++++ ++ + L
Sbjct: 242 LPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVG-VSQSIYASLFRSCAALSALRL 300
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+++H H LK FGS + VG+ +DMYAK G + DA++ +P+ ++ YN +I G R
Sbjct: 301 GKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYAR 360
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
S R F+ +K F+ + GL D+ T
Sbjct: 361 ------SDRGFQALKS-------------------------FQLLLKTGLGFDEITLSGA 389
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC + EG+Q+H +++ N+ V +A++DMY KCK++ A +F M ++
Sbjct: 390 LNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDA 449
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW A++ QNG EE + F +M + +EPDDFT GSV+ +CA +L G + H R
Sbjct: 450 VSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTR 509
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ +G+ V ALV Y KCG IE + ++ + + VSW A++SG++ ++ +
Sbjct: 510 IIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDA 569
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC--M 418
F +ML G+ PD T VL C+ V G+ ++K+ D Y C +
Sbjct: 570 HKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQ---ELQSDVYICSTL 626
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAES--LLELDPY 476
+D+ S+ G +++++ K P D + W +L HG E ES L+ + P
Sbjct: 627 VDMYSKCGNMQDSQLMFEKAP-NRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKP- 684
Query: 477 NPASYV 482
N A++V
Sbjct: 685 NHATFV 690
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 144/497 (28%), Positives = 238/497 (47%), Gaps = 65/497 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN +ISG +G ++ V+ M + G+G R + + +L + D+
Sbjct: 141 MPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVG-FDRASLAVVLKACGALEECDM 199
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+HG ++KFGF V GS L+ MYAK + D+ F ELPEKN V
Sbjct: 200 GVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWV----------- 248
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SW+ MI G +QN E ++LF+EM+ G+ + Q + S+
Sbjct: 249 --------------------SWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASL 288
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+C L AL GK++H+ +++ ++ VG+A +DMY KC + A+ V +M ++
Sbjct: 289 FRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSL 348
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
S+ A++VGY ++ +A+K F + + G+ D+ TL +++CA++ EG Q HG
Sbjct: 349 QSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGL 408
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ + +S I V+NA++ YGKC + ++ LF+ M RD VSW A+++ + G ET
Sbjct: 409 AVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEET 468
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE--------------- 405
+ F M+ ++PD+ T VL AC+ + G ++K
Sbjct: 469 LAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDM 528
Query: 406 -------YGIRPIHDH--------YTCMIDILSRAGRLEEAKSFINK---MPFPPDAIGW 447
IHD + +I S + E+A F ++ M PD +
Sbjct: 529 YCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTY 588
Query: 448 ATLLSSCRIHGNVEIGK 464
A +L +C V +GK
Sbjct: 589 AAVLDTCANLATVGLGK 605
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/646 (35%), Positives = 354/646 (54%), Gaps = 40/646 (6%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG----- 61
VSWN ++ G ++ G ++ +L+ L + + I+++ C D
Sbjct: 343 VSWNTMVGGFSAEGDIHGTFD----LLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSL 398
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+++H + LK F +YD ++ N + +
Sbjct: 399 KELHCYSLKQEF-------------------VYDE------------LLANAFVASYAKC 427
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G + ++R+F G++ K SW +I G Q+ R ++D +M+ GL D FT S+L
Sbjct: 428 GSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLL 487
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+AC L +L GK++H FIIRN + ++FV +++ +Y C + + +F M ++V
Sbjct: 488 SACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLV 547
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW ++ G+ QNG E A+ +F M GI+P ++ +V +C+ L SL G + H +
Sbjct: 548 SWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYA 607
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
L L ++ +++ Y K G I S ++FN + + SW A++ GY G+A E I
Sbjct: 608 LKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAI 667
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
LFE+M G PD++T +GVL+AC+ +GL+ +G Y + M +G++P HY C+ID+
Sbjct: 668 KLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDM 727
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
L RAG+L+ A +M PD W +LLS CRIH N+E+G+ A L L+P P +Y
Sbjct: 728 LGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENY 787
Query: 482 VLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIY 541
VLLS++YA GKWD V Q+R+ M+E +RKD GCSWI+ +V F + ++I
Sbjct: 788 VLLSNLYAGLGKWDDVRQVRQRMKEMSLRKDAGCSWIELNGKVFSFVVGERFLDGFEEIK 847
Query: 542 AELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVV 601
+ L K+ K GY PD SSV HD+ EKI+ L HSEKLAI +GL+ G +RV
Sbjct: 848 SLWSILEMKIWKMGYRPDTSSVQHDLSEEEKIEQLRGHSEKLAITYGLIKTSEGTTLRVY 907
Query: 602 KNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLR+C DCHNA K ISK+ +REI+VRD RFH F G CSCGD+W
Sbjct: 908 KNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFNKGFCSCGDYW 953
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 115/473 (24%), Positives = 219/473 (46%), Gaps = 55/473 (11%)
Query: 10 NLLISGHASHGSVNDAVKVYNLMLKDGL---GNLSRI---------------TFSTMLIM 51
N L+S + +HG V+DA+K++++M + L ++ R+ T T+L +
Sbjct: 226 NALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGDDGAFMPDVATVVTVLPV 285
Query: 52 SSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMY 111
+ R + +G+ +HG +K + V + L+DMY+K G I D
Sbjct: 286 CAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIID---------------- 329
Query: 112 NTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL--EG 169
S+ +F+ +K+ +SW TM+ G G DL R+M E
Sbjct: 330 ---------------SQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSED 374
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
+ D+ T + + C L K++H + ++ + + + +A V Y KC S+ YA+
Sbjct: 375 VKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQ 434
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
VF + K + SW A++ GY Q+ ++ M+ +G+ PD+FT+ S++S+C+ L
Sbjct: 435 RVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLK 494
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
SL G + HG + L + V ++++ Y CG + LF+ M VSW +++
Sbjct: 495 SLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVIT 554
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
G+ + G + LF +M+ +G++P ++++ V ACS + GR +K +
Sbjct: 555 GHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKH--LL 612
Query: 410 PIHDHYTC-MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+ C +ID+ ++ G + ++ N + A W ++ +HG +
Sbjct: 613 EDNAFIACSIIDMYAKNGAITQSSKVFNGLK-EKSAASWNAMIMGYGMHGRAK 664
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 120/538 (22%), Positives = 218/538 (40%), Gaps = 85/538 (15%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN +IS ++ + ++ ++++ M+ TF ++ + V +G +HG +
Sbjct: 154 WNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLV 213
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+K G +FVG+ LV Y G + DA
Sbjct: 214 VKTGLVEDLFVGNALVSFYGTHGFVSDA-------------------------------L 242
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
+LF M +++ +SW +MI NG + D T +VL C
Sbjct: 243 KLFDIMPERNLVSWNSMIRVFSDNGDD------------GAFMPDVATVVTVLPVCARER 290
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
+ GK +H + ++ + V +AL+DMY K I ++ +F+ KNVVSW M+
Sbjct: 291 EIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVG 350
Query: 249 GYGQNGCSEEAVKIFCNM--QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
G+ G + M ++ D+ T+ + + C + + L + H SL
Sbjct: 351 GFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEF 410
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ ++NA V Y KCG++ + R+F+ + + SW AL+ GYA+ ++D +
Sbjct: 411 VYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQ 470
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP-----------IHDHY 415
M + GL PD T+ +LSACS+ + G+ +++ + R IH
Sbjct: 471 MKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGE 530
Query: 416 TCMIDILSRA-------------------GRLEEAKSFINKMPF---PPDAIGWATLLSS 453
C + +L A G E A +M P I T+ +
Sbjct: 531 LCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGA 590
Query: 454 CRIHGNVEIGK----WAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREK 507
C + ++ +G+ +A + LLE + + S + +YA G S++ ++EK
Sbjct: 591 CSLLPSLRLGREAHAYALKHLLEDNAFIACSII---DMYAKNGAITQSSKVFNGLKEK 645
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 159/350 (45%), Gaps = 45/350 (12%)
Query: 40 LSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRG 99
L R +L S R+ +++GR+IH ++ GS + R
Sbjct: 82 LVREALGLLLQASGKRKDIEMGRKIH----------HLVSGSTRL-------------RS 118
Query: 100 FDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAI 159
D L + I MY G ++SR F ++ K+ W +I+ +N L E +
Sbjct: 119 DDVLCTRIITMYAMC-------GSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVL 171
Query: 160 DLFREMRLEG-LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDM 218
++F +M + L D FTF V+ AC G+ + G +H +++ +++FVG+ALV
Sbjct: 172 EMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSF 231
Query: 219 YCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
Y + A +F M +N+VSW +M+ + NG PD T+
Sbjct: 232 YGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNG------------DDGAFMPDVATV 279
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
+V+ CA + G HG ++ L + V+NAL+ Y K G I DS +F N
Sbjct: 280 VTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNN 339
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKML--SHGLKPDEVTLIGVLSAC 386
++ VSW +V G++ G + T DL +ML S +K DEVT++ + C
Sbjct: 340 KNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVC 389
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 135/297 (45%), Gaps = 36/297 (12%)
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYAESVFR 233
G +L A G +E G++IH + + D+V + ++ MY C S + S F
Sbjct: 86 ALGLLLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLC-TRIITMYAMCGSPDDSRSAFD 144
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLE 292
+ KN+ W A++ Y +N E +++F M + + PD+FT VI +CA ++ +
Sbjct: 145 ALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVG 204
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
G HG + TGL+ + V NALV+FYG G + D+ +LF+ M R+ VSW +++ ++
Sbjct: 205 IGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFS 264
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGL--VEKGRHYFEI-------MV 403
G PD T++ VL C+R V KG H + + +V
Sbjct: 265 DNGDDG------------AFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELV 312
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
+ ++ + C+ID I K+ + + W T++ G++
Sbjct: 313 VNNALMDMYSKWGCIID-----------SQMIFKLNNNKNVVSWNTMVGGFSAEGDI 358
>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
Length = 592
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/533 (43%), Positives = 318/533 (59%), Gaps = 10/533 (1%)
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM-DQFTF 177
LR + SR L G D ++ I G R + L E+ LA+ D T+
Sbjct: 66 LRYAVAVLSRLLPHGPLDPFPLNTVLRIAA----GSPRPRVAL--ELHRRRLALPDTHTY 119
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA- 236
++ AC LLAL EG+ +HA +N VFV ++LV +Y C + A VF M
Sbjct: 120 PPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPV 179
Query: 237 -WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
+N+VSW +ML + NG E + +F M PD FT+ SV+++CA +L G
Sbjct: 180 RGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGALALGR 239
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALVSGYAKF 354
+ H GL+ VSNAL+ Y KCG++ D+ R+F EM + R VSWT+L+ G A
Sbjct: 240 RVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAAN 299
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G E ++LF M L P E+T++GVL ACS GLV+ G YF+ M ++YGI P +H
Sbjct: 300 GFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEH 359
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
CM+D+L RAGR+EEA +I MP P+A+ W TLL SC +H +E+GK A E L+ELD
Sbjct: 360 LGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKKLELGKVAWERLVELD 419
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS 534
P + YVLLS++YA+ G W V LR+TM + VRK+PG S ++ ++ V+ F D S
Sbjct: 420 PGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLVELRNSVYEFVMGDRSH 479
Query: 535 PYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPP 594
P S+QIY L ++ ++ +EGY+P S+VL D+E EK LN+HSE+LAIAF LL P
Sbjct: 480 PESEQIYEMLAEIAERLRREGYIPRTSNVLADIEEEEKETALNYHSERLAIAFALLKSLP 539
Query: 595 GLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G+PIR++KNLR+C DCH A ISK+ REI+VRD RFH F+ G CSC D+W
Sbjct: 540 GIPIRIIKNLRMCGDCHVAFNLISKVYDREIIVRDRSRFHHFQGGACSCKDYW 592
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 143/299 (47%), Gaps = 32/299 (10%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +H K GF + VFV + LV +Y GL A + FDE+P
Sbjct: 135 GECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMP---------------- 178
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
++ ++ +SW +M+ NG E + +F EM A D FT SV
Sbjct: 179 -------------VRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSV 225
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW-KN 239
LTAC AL G+++H ++ + +N V +AL+D+Y KC S+ A +F M +
Sbjct: 226 LTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRT 285
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VVSWT+++VG NG +EA+++F M+R + P + T+ V+ +C++ +++G ++
Sbjct: 286 VVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFD 345
Query: 300 RSLVT-GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGK 356
R G+ I +V G+ G +E+++ M + + V W L+ A K
Sbjct: 346 RMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKK 404
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 106/255 (41%), Gaps = 57/255 (22%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLML-----KDGLGNLSRITFSTMLIMSSSRRCVDLG 61
VSWN +++ A++G N+ + V+ ML DG T ++L + + LG
Sbjct: 185 VSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGF------TIVSVLTACAEFGALALG 238
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITGLLR 120
R++H ++ K G V + L+D+YAK G + DA+R F+E+ + +V + ++I G
Sbjct: 239 RRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVG--- 295
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
L NG +EA++LF M E L + T V
Sbjct: 296 ----------------------------LAANGFGKEALELFSLMEREKLVPTEITMVGV 327
Query: 181 LTACG-------GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
L AC G + K+ + R +H +VD+ + ++ A
Sbjct: 328 LYACSHCGLVDDGFRYFDRMKEDYGISPRIEHL------GCMVDLLGRAGRVEEAYDYII 381
Query: 234 TMAWK-NVVSWTAML 247
TM + N V W +L
Sbjct: 382 TMPLEPNAVVWRTLL 396
>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/644 (36%), Positives = 352/644 (54%), Gaps = 67/644 (10%)
Query: 40 LSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSY--VFVGSPLVDMYAKLGLIYDAK 97
L + ++ ++ + + R++H HIL + F+ + L++MY K G
Sbjct: 58 LDPVGYAALIRRCGAANAISAARRLHSHILSLPHSNSQPPFLANLLIEMYGKCG------ 111
Query: 98 RGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLERE 157
LP +R LF M ++ +WT + NG E
Sbjct: 112 ----RLPY---------------------ARELFESMPSRNVHTWTVAMAAFSHNGCHSE 146
Query: 158 AIDLFREMRLEGLAMDQFTFGSVLTACGGLLA--LEEGKQIHAFIIRNDHKDNVFVGSAL 215
A+ FR M G D+ TF +L A + A +++G++IH + + NV VG+A+
Sbjct: 147 ALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTAV 206
Query: 216 VDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQ-------- 267
+ MY KC + A + F + WKN V+W AM+ Y +G EA+++F M
Sbjct: 207 ISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMHDADSVCWN 266
Query: 268 ------------------------RNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
+ P T +VI CA L++L++G H R
Sbjct: 267 AMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRA 326
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
T + + VSNALV YGKCG ++++ +F+ M ++DE+SW ++S YA G +++ + L
Sbjct: 327 TNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLL 386
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
+++M G+KP EVT +G+LSACS GLV G YF M ++ I+P H+ C+ID+L
Sbjct: 387 YQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLG 446
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
R GRL EA+ + MP +A+ W +LL +C+ HG+++ G AA+ +++ P+ YVL
Sbjct: 447 RGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVL 506
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LS+IYA+ G+W V ++R+ M +GV+K PG SWI+ VH F + D S P ++IY E
Sbjct: 507 LSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWIEIGDVVHEFVSGDSSHPQGEEIYVE 566
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
L K+ +M GYVPD SSV HD+E EK +L HSEKLAI +G + +P +R+VKN
Sbjct: 567 LGKMVEEMKGLGYVPDTSSVFHDLEEEEKEDLLVCHSEKLAIVYGNMVVPGKSMLRIVKN 626
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LRVC DCH ATK++S+IT R+I+VRDA RFHLF+NG CSC D+W
Sbjct: 627 LRVCLDCHTATKFMSRITGRKIVVRDAARFHLFENGSCSCRDYW 670
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 161/345 (46%), Gaps = 45/345 (13%)
Query: 155 EREA----IDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDN-- 208
ERE+ I L LE +D + +++ CG A+ +++H+ I+ H ++
Sbjct: 40 ERESLHKSIQLLESRELE---LDPVGYAALIRRCGAANAISAARRLHSHILSLPHSNSQP 96
Query: 209 VFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR 268
F+ + L++MY KC + YA +F +M +NV +WT + + NGC EA+ F M +
Sbjct: 97 PFLANLLIEMYGKCGRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQ 156
Query: 269 NGIEPDDFTLGSVI--SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
+G PD T ++ + A++++G + H + ++GL+ + V A+++ YGKCG +
Sbjct: 157 SGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTAVISMYGKCGRL 216
Query: 327 EDSH-------------------------------RLFNEMNVRDEVSWTALVSGYAKFG 355
+D+ LF EM+ D V W A+++ YA+ G
Sbjct: 217 DDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMHDADSVCWNAMIAAYAQHG 276
Query: 356 KANETIDLFEKML-SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
+ + +DL+ M + L P + T + V+ C+ +++GR V+
Sbjct: 277 RGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGR-AIHARVRATNFDANLLV 335
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
++ + + G L+EA + M D I W T++SS HG+
Sbjct: 336 SNALVHMYGKCGCLDEALDVFHSMKL-KDEISWNTIISSYAYHGH 379
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 119/262 (45%), Gaps = 39/262 (14%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V WN +I+ +A HG A+ +Y M + TF T++ + + + GR I
Sbjct: 261 DSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAI 320
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H + F + + V + LV MY K G + +A F + K+ + +NT+I
Sbjct: 321 HARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTII--------- 371
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
S + G D +A+ L++EM L+G+ + TF +L+AC
Sbjct: 372 --SSYAYHGHSD--------------------QALLLYQEMDLQGVKPTEVTFVGLLSAC 409
Query: 185 --GGLLALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK-N 239
GGL+A +G + + +++DH K +V ++D+ + + AE V ++M + N
Sbjct: 410 SHGGLVA--DGLD-YFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQAN 466
Query: 240 VVSWTAMLVGYGQNGCSEEAVK 261
V W ++L +G + V+
Sbjct: 467 AVQWMSLLGACKTHGDLKRGVR 488
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/512 (41%), Positives = 318/512 (62%), Gaps = 2/512 (0%)
Query: 138 DSISWTTMITGLMQNGLERE-AIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQI 196
D+ + T+I Q G ++ A+ L+ M + + ++FT+ VL AC GL L G+ +
Sbjct: 95 DAFLFNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTV 154
Query: 197 HAFIIRNDHKDNVFVGSALVDMYCKCKS-IKYAESVFRTMAWKNVVSWTAMLVGYGQNGC 255
H +++ ++ V + +V MY C I A VF M + V+W+AM+ GY + G
Sbjct: 155 HGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGR 214
Query: 256 SEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNA 315
S EAV +F MQ + PD+ T+ S++S+C +L +LE G + + VSNA
Sbjct: 215 STEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNA 274
Query: 316 LVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPD 375
L+ + KCG+I + +LF MN + VSWT+++ G A G+ E LFE+M S G+ PD
Sbjct: 275 LIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPD 334
Query: 376 EVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFI 435
+V IG+LSACS +GLVE+GR YF M+K+Y + P +HY CM+D+ R G ++EA F+
Sbjct: 335 DVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFV 394
Query: 436 NKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWD 495
MP P+ + TL+S+CR HG ++G+ + L++ +P + ++YVLLS+IYA W+
Sbjct: 395 RNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWE 454
Query: 496 HVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEG 555
+++R M KG++K PG + I+ + ++ F A D S +IY ++++ R+M K G
Sbjct: 455 KKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQHKEIYEMVDEMGREMKKSG 514
Query: 556 YVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATK 615
Y P S VL D+ +K LN HSEKLAIAFGLL PPG PIR+VKNLRVCSDCH+A+K
Sbjct: 515 YRPSTSEVLLDINEEDKEDSLNRHSEKLAIAFGLLRTPPGTPIRIVKNLRVCSDCHSASK 574
Query: 616 YISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ISKI REI++RD RFH FK+G+CSCGDFW
Sbjct: 575 FISKIYDREIIMRDRNRFHHFKSGQCSCGDFW 606
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 149/362 (41%), Gaps = 51/362 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V+W+ +I G+A G +AV ++ M + IT +ML + ++L
Sbjct: 194 MPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCP-DEITMVSMLSACTDLGALEL 252
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ I +I + V V + L+DM+AK G I A + F + EK IV + ++I G+
Sbjct: 253 GKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAM 312
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G RG +EA LF EM G+A D F +
Sbjct: 313 HG---------RG----------------------QEATCLFEEMTSSGVAPDDVAFIGL 341
Query: 181 LTACGGLLALEEGKQIHAFIIRN-DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
L+AC +E G++ +++ + +VDMYC+ +K A R M +
Sbjct: 342 LSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEP 401
Query: 240 VVSWTAMLV----GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
LV G+G+ E+ K+ M+ + ++ L S I A S E+ T
Sbjct: 402 NPVILRTLVSACRGHGEFKLGEKITKLL--MKHEPLHESNYVLLSNIY--AKTLSWEKKT 457
Query: 296 QFHGRSLVTGL-----ISFITVSNALVTFYGKCGNIEDSHRLFNEM-NVRDEVSWTALVS 349
+ V G+ + I + N + F + SH+ E+ + DE+ S
Sbjct: 458 KIREVMEVKGMKKVPGSTMIEIDNEIYEFVAG----DKSHKQHKEIYEMVDEMGREMKKS 513
Query: 350 GY 351
GY
Sbjct: 514 GY 515
>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
Length = 767
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/678 (34%), Positives = 371/678 (54%), Gaps = 64/678 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLML---------KDGLGNLSRITFSTMLIMSSSR 55
D VSW LIS ++S+G V++A + M G+ +S + +
Sbjct: 119 DVVSWTALISAYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGS 178
Query: 56 RCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
C+ G +HG ++K+GFG +G+ +V MY+ + A R F+ +P
Sbjct: 179 NCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIP----------- 227
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM--- 172
++ +D +SW ++I+G NG A+ F +M EG +
Sbjct: 228 ------------------IEQRDVVSWNSLISGFXLNGEAERALRTFEDMVSEGTSAVEP 269
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHK----DNVFVGSALVDMYCKCKSIKYA 228
++ T ++L +C L +E +H +I +V V +AL+DM+ +C ++ A
Sbjct: 270 NRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALA 329
Query: 229 ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG------IEPDDFTLGSVI 282
+F + KNVV W+AM+ GY Q C EEA+++F M G ++P+ TL SVI
Sbjct: 330 REIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVI 389
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN--VRD 340
++C+ L + + H ++ TGL +++AL+ KCG+IE ++F+EM+ R
Sbjct: 390 AACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRT 449
Query: 341 EVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
VSW++++ G+ ++LF +M + G +P+E+T I VLSACS AGLVE+G+ F
Sbjct: 450 VVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFN 509
Query: 401 IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
M K+YG+ P HY C++D+L RAG L+EA + I MP D W +LL++C +HGN
Sbjct: 510 SMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNC 569
Query: 461 EIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKY 520
++G+ + +L LD + +VLL+++Y G+WD V ++R +R G+RK PG S+I+
Sbjct: 570 KLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEI 629
Query: 521 KSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEG-YVPDMSSVLHDVELSEKIKMLNHH 579
+ V+ F A+D S P S+ IY EL+ L+ ++ K YV + + D +++ I +H
Sbjct: 630 GNEVYSFMAEDRSHPESEMIYKELDGLDERVRKAAKYVTETGLNVEDGDIAGLIXRCKYH 689
Query: 580 SEKLAIAFGLLFIP----------PGLPIRVVKNLRVCSDCHNATKYISKITQREILVRD 629
SE+LAIAFGL+ I PIR+ KNLRVC DCH TK +SK+ RE++VRD
Sbjct: 690 SERLAIAFGLIMIDRHSTCSCSLRTATPIRITKNLRVCRDCHAYTKLVSKVIDRELIVRD 749
Query: 630 AVRFHLFKNGECSCGDFW 647
A RFH F++G CSCGD+W
Sbjct: 750 AHRFHHFRDGFCSCGDYW 767
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/517 (25%), Positives = 236/517 (45%), Gaps = 71/517 (13%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D WN LI+ +A+ A+ + M + + + TF +L ++ R + Q+
Sbjct: 17 DTFHWNSLIAKNATQNP-QTALTFFTRMQAHAVPS-NNFTFPALLKACAALRRLLPTLQV 74
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H ++ + G + F + LVD Y K G Y A + FDE+PE ++
Sbjct: 75 HAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSV---------------- 118
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL-------EGLAMDQFTF 177
D +SWT +I+ NG EA F MR E +D +
Sbjct: 119 -------------DVVSWTALISAYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSL 165
Query: 178 GSVLTACG---GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR- 233
G++++AC G L G +H +++ + +G+++V MY CK + A VF
Sbjct: 166 GALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNG 225
Query: 234 -TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG---IEPDDFTLGSVISSCANLA 289
+ ++VVSW +++ G+ NG +E A++ F +M G +EP+ T+ +++ SCA L
Sbjct: 226 IPIEQRDVVSWNSLISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELG 285
Query: 290 SLEEGTQFH----GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
+E + H R + + V AL+ + +CGN+ + +F+ + ++ V W+
Sbjct: 286 CVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWS 345
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHG------LKPDEVTLIGVLSACSRAGLVEKGRHYF 399
A+++GY + E + LF +ML G +KP+ VTL+ V++ACSR G
Sbjct: 346 AMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSAS--- 402
Query: 400 EIMVKEYGIRPIHDH----YTCMIDILSRAGRLEEAKSFINKMPFPP-DAIGWATLLSSC 454
M+ +Y + D + +ID+ ++ G +E + ++M + W++++ +
Sbjct: 403 --MIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAE 460
Query: 455 RIHGNVEIGKWAAESLLELDP--YNPASYVLLSSIYA 489
IHG GK A E E+ Y P +S + A
Sbjct: 461 GIHGE---GKRALELFSEMRTGGYEPNEITYISVLSA 494
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 177/358 (49%), Gaps = 37/358 (10%)
Query: 123 LVEESRRLFR-GMKDKDSISWTTMIT-GLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
++ ++RR + + KD+ W ++I QN + A+ F M+ + + FTF ++
Sbjct: 1 MIGKTRRWYXCSISHKDTFHWNSLIAKNATQN--PQTALTFFTRMQAHAVPSNNFTFPAL 58
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM--AWK 238
L AC L L Q+HA++ R + F +ALVD Y KC YA VF M
Sbjct: 59 LKACAALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSV 118
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQ----RNGIE---PDDFTLGSVISSCA---NL 288
+VVSWTA++ Y NGC +EA F M+ +G E D +LG+++S+CA
Sbjct: 119 DVVSWTALISAYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGS 178
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV--RDEVSWTA 346
L G+ HG + G + N++V Y C ++ + R+FN + + RD VSW +
Sbjct: 179 NCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNS 238
Query: 347 LVSGYAKFGKANETIDLFEKMLSHG---LKPDEVTLIGVLSACSRAGLVE---------K 394
L+SG+ G+A + FE M+S G ++P+ VT+I +L +C+ G VE
Sbjct: 239 LISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYIS 298
Query: 395 GRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
RH ++ K+ + T ++D+ +R G L A+ + + + + W+ +++
Sbjct: 299 SRHSSLLVAKDVVV------LTALLDMHARCGNLALAREIFDGVE-GKNVVCWSAMIA 349
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 237/630 (37%), Positives = 353/630 (56%), Gaps = 82/630 (13%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAK--RGFDELPEKNIVMYNTMITGLL 119
+Q+H IL G +V + L+ KL + D F+++ N +YN +I G L
Sbjct: 63 KQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQVNYPNPFLYNALIRGYL 122
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+EE RL +E+ + + MR EG+ FTF +
Sbjct: 123 ----IEE--RL-------------------------KESTEFYSLMRKEGVVPVSFTFTA 151
Query: 180 VLTACGGLLALEEGKQIHA-FIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM--- 235
+ ACG + + G+QIH I+ +++ VG++++DMY KC ++ VF M
Sbjct: 152 LFKACGAKMDVGLGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNR 211
Query: 236 ---AW-------------------------KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQ 267
+W K++V+WT M+ G+ QN EA+ F MQ
Sbjct: 212 DVISWTELISAYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQ 271
Query: 268 RNGIEPDDFTLGSVISSCANLAS---------LEEGTQFHGRSLVTGLISFITVSNALVT 318
G+E D+ TL VIS+CA L + + E ++F G+ V V +AL+
Sbjct: 272 EFGVETDEITLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVV-------VGSALID 324
Query: 319 FYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVT 378
Y KCG++ D++R+F M R+ S+++++ G+A G+ ++ + LF++M+ +KP+ VT
Sbjct: 325 MYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVT 384
Query: 379 LIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
IGVL+ACS AG+VE+G FE+M K YGI+P DHYTCM+D+L RAGRL+EA + M
Sbjct: 385 FIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTM 444
Query: 439 PFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVS 498
P P W LL +CRIH + +I AA L EL+PY +Y+LL++IYAS G+W+ VS
Sbjct: 445 PIEPHGGVWGALLGACRIHKSPDIAAIAANHLFELEPYCIGNYILLANIYASCGRWNDVS 504
Query: 499 QLRRTMREKGVRKDPGCSWIKY-KSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYV 557
+R+ MR +G+RK+P SWI+ K VH F + D + P S +I LE L ++ +GY
Sbjct: 505 TVRKLMRTRGLRKNPAFSWIESEKGMVHEFFSGDMTHPRSGEIKQALEDLLDRLEAKGYQ 564
Query: 558 PDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYI 617
P +SSV +DV +K ++L HSEKLA+AFGL+ PG IR+VKNLR+C DCH+
Sbjct: 565 PHLSSVSYDVNDEDKRRILMTHSEKLALAFGLISTIPGSKIRIVKNLRICEDCHSVICGA 624
Query: 618 SKITQREILVRDAVRFHLFKNGECSCGDFW 647
S+IT REI+VRD +RFH F +G CSCG+FW
Sbjct: 625 SQITGREIIVRDIMRFHHFHDGICSCGNFW 654
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 119/389 (30%), Positives = 211/389 (54%), Gaps = 12/389 (3%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH- 67
+N LI G+ + ++ + Y+LM K+G+ +S TF+ + ++ V LGRQIHG
Sbjct: 114 YNALIRGYLIEERLKESTEFYSLMRKEGVVPVS-FTFTALFKACGAKMDVGLGRQIHGQT 172
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
IL GFG + VG+ ++DMY K G + ++ FDE+P ++++ + +I+ ++ G +E +
Sbjct: 173 ILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMESA 232
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
LF G+ KD ++WT M++G QN REAI F +M+ G+ D+ T V++AC L
Sbjct: 233 GELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQL 292
Query: 188 LALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
A + I +++ K +V VGSAL+DMY KC S+ A VF+ M +NV S+++
Sbjct: 293 GAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSS 352
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHGRSLVT 304
M++G+ +G +A+K+F M + I+P+ T V+++C++ +E+G Q F
Sbjct: 353 MILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCY 412
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKANETIDL 363
G+ +V G+ G ++++H L M + W AL+ G + K+ + +
Sbjct: 413 GIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALL-GACRIHKSPDIAAI 471
Query: 364 FEKMLSHGLKP----DEVTLIGVLSACSR 388
L L+P + + L + ++C R
Sbjct: 472 AANHLFE-LEPYCIGNYILLANIYASCGR 499
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 134/351 (38%), Gaps = 88/351 (25%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D V+W +++SG A + +A+ + M + G + + ++ C L
Sbjct: 239 LPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFG------VETDEITLIGVISACAQL 292
Query: 61 GRQIHGHILK-------FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNT 113
G + ++ FG V VGS L+DMY+K G + DA R F + E+N+ Y++
Sbjct: 293 GAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSS 352
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
MI G G V +A+ LF EM + +
Sbjct: 353 MILGFAMHGRV-------------------------------HDAMKLFDEMVKTEIKPN 381
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
+ TF VLTAC +E+G QI ++ KC IK +
Sbjct: 382 RVTFIGVLTACSHAGMVEQGWQI-------------------FELMEKCYGIKPSAD--- 419
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC-----ANL 288
+T M+ G+ G +EA ++ M IEP G+++ +C ++
Sbjct: 420 --------HYTCMVDLLGRAGRLQEAHELVKTMP---IEPHGGVWGALLGACRIHKSPDI 468
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
A++ F G ++I ++N Y CG D + M R
Sbjct: 469 AAIAANHLFELEPYCIG--NYILLAN----IYASCGRWNDVSTVRKLMRTR 513
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 236/629 (37%), Positives = 340/629 (54%), Gaps = 73/629 (11%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
Q+H LK ++ FV S L+ +Y+ P+ N + Y
Sbjct: 33 EQLHAFSLKTAIFNHPFVSSRLLALYSD--------------PKINDLGY---------- 68
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
+R +F ++ + I W T+I ++N + I LF E+ E L D FT V+
Sbjct: 69 -----ARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYLP-DNFTLPCVI 122
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
C L ++EGKQIH ++ +VFV +LV+MY KC I A VF M K+VV
Sbjct: 123 KGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVV 182
Query: 242 ------------------------------------------SWTAMLVGYGQNGCSEEA 259
+W M+ GY NG +A
Sbjct: 183 LWNSLIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDA 242
Query: 260 VKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTF 319
VK+F M + G P TL SV+S+ + LA L +G H G + +L+
Sbjct: 243 VKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEM 302
Query: 320 YGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTL 379
Y KCG IE + +F + + WTA++ G G AN + LF +M GLKP+ +
Sbjct: 303 YAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIF 362
Query: 380 IGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP 439
IGVL+AC+ AGLV+ GR YF++M+ EY I P +HY C++DIL RAG LEEAK+ I MP
Sbjct: 363 IGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMP 422
Query: 440 FPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQ 499
P+ + W +LL R HG ++IG++AA+ ++E+ P Y+LLS++YA+ G W+ VS
Sbjct: 423 ISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSH 482
Query: 500 LRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPD 559
+R M ++G RKDPGCS +++K +H F D S P + +IYA++ ++ K+ G+VPD
Sbjct: 483 VREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPD 542
Query: 560 MSSVLHDVE-LSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYIS 618
+ VL +E EK L +HSE+LAIAFGL+ + PG+PIR++KNLRVC+DCH+ TK +S
Sbjct: 543 TTQVLLCIEGEKEKEAELENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLS 602
Query: 619 KITQREILVRDAVRFHLFKNGECSCGDFW 647
KI REI+VRD RFH FKNG CSC D+W
Sbjct: 603 KIYSREIIVRDNCRFHHFKNGSCSCMDYW 631
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 211/414 (50%), Gaps = 22/414 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
+ WN +I + + +D + +++ ++ + L + T ++ + V G+QIHG
Sbjct: 82 IHWNTIIKCYVENQFSHDGIVLFHELVHEYLPD--NFTLPCVIKGCARLGVVQEGKQIHG 139
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNT-----------MI 115
LK GFGS VFV LV+MY+K G I A++ FD + +K++V++N+ MI
Sbjct: 140 LALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMI 199
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
G ++ G + + LF M D ++W MI G NG +A+ +F M G
Sbjct: 200 NGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHA 259
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
T SVL+A GL L +G+ IH+++ +N + + +G++L++MY KC I+ A +VFR +
Sbjct: 260 TLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAI 319
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
K V WTA++VG G +G + A+ +F M + G++P+ V+++C + +++G
Sbjct: 320 QKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGR 379
Query: 296 QFHGRSLVTGLIS-FITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAK 353
Q+ + I + LV + G++E++ M + ++V W +L+ G
Sbjct: 380 QYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRN 439
Query: 354 FGKANETIDLFEKMLSHGLK--PDEVTLIGVLSACSRA-GLVEKGRHYFEIMVK 404
GK ID+ E ++ P+ + +LS A G+ EK H E+M K
Sbjct: 440 HGK----IDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYK 489
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 119/257 (46%), Gaps = 36/257 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V+WNL+I+G+ +G DAVK++ +MLK G S T ++L S +
Sbjct: 218 MPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLG-SRPSHATLVSVLSAVSGLAVLGK 276
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR IH ++ K GF +G+ L++MYAK G I
Sbjct: 277 GRWIHSYMEKNGFELDGILGTSLIEMYAKCGCI--------------------------- 309
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
E + +FR ++ K WT +I GL +G+ A+ LF EM GL + F V
Sbjct: 310 ----ESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGV 365
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVG--SALVDMYCKCKSIKYAESVFRTMAWK 238
L AC +++G+Q ++ N++K + LVD+ C+ ++ A++ M
Sbjct: 366 LNACNHAGLVDDGRQYFDMMM-NEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPIS 424
Query: 239 -NVVSWTAMLVGYGQNG 254
N V W ++L G +G
Sbjct: 425 PNKVIWMSLLGGSRNHG 441
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/517 (42%), Positives = 305/517 (58%), Gaps = 6/517 (1%)
Query: 134 MKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEG 193
+ D S T++ + R A+ L R D T+ +L AC LLAL G
Sbjct: 85 LPSPDPFSLNTVLRIFASSARPRVALALHRRHLAPP---DTHTYPPLLQACARLLALRYG 141
Query: 194 KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW--KNVVSWTAMLVGYG 251
+ +HA +N VFV ++LV +Y C + A VF + +N+VSW ++L G+
Sbjct: 142 EGLHAEACKNGLVSLVFVKNSLVHLYGACGLFESAHRVFDEIPPPERNLVSWNSVLNGFA 201
Query: 252 QNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFIT 311
NG E + +F M PD FT+ SV+++CA + L G + H GL+
Sbjct: 202 ANGRPNEVLTVFREMLEVEFAPDGFTVVSVLTACAEIGVLALGRRVHVFVAKVGLVGNAH 261
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALVSGYAKFGKANETIDLFEKMLSH 370
NAL+ Y KCG ++D+ ++F EM V R VSWT+L+ G A G + + LF M
Sbjct: 262 AGNALIDLYAKCGGVDDARKMFGEMGVGRTVVSWTSLIVGLAVNGFGMDALQLFSMMERE 321
Query: 371 GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEE 430
L P E+T++GVL ACS GLV+ G YF+ M EYGI P +H CM+D+L RAGR+EE
Sbjct: 322 KLMPTEITMVGVLYACSHCGLVDDGFRYFDQMKAEYGITPRIEHLGCMVDLLGRAGRVEE 381
Query: 431 AKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYAS 490
A ++I MP P+A+ W TLL +C +H +EIG+ A L+ELDP + YVLLS++YA
Sbjct: 382 AHNYITTMPLEPNAVVWRTLLGACAMHKKLEIGEAAWARLVELDPGHSGDYVLLSNLYAG 441
Query: 491 KGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRK 550
G+W V LR+TM GVRK+PG S ++ ++ V+ F D S P +DQIY L + +
Sbjct: 442 VGRWADVHVLRKTMVTHGVRKNPGHSLVELRNSVYEFVMGDRSHPETDQIYEMLGDIAER 501
Query: 551 MIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDC 610
+ ++GY+P S+VL D+E EK LN+HSE+LAIAF LL PG PIR+VKNLRVC DC
Sbjct: 502 LRRQGYIPHTSNVLADIEDEEKESALNYHSERLAIAFALLKSLPGTPIRIVKNLRVCGDC 561
Query: 611 HNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
H A K ISK+ REI+VRD RFH FK G CSC D+W
Sbjct: 562 HMAIKLISKVYDREIIVRDRSRFHHFKGGACSCKDYW 598
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 161/359 (44%), Gaps = 36/359 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D S N ++ AS A+ ++ + L T+ +L + +
Sbjct: 85 LPSPDPFSLNTVLRIFASSARPRVALALH----RRHLAPPDTHTYPPLLQACARLLALRY 140
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +H K G S VFV + LV +Y GL A R FDE+P
Sbjct: 141 GEGLHAEACKNGLVSLVFVKNSLVHLYGACGLFESAHRVFDEIPPP-------------- 186
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+++ +SW +++ G NG E + +FREM A D FT SV
Sbjct: 187 ---------------ERNLVSWNSVLNGFAANGRPNEVLTVFREMLEVEFAPDGFTVVSV 231
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA-WKN 239
LTAC + L G+++H F+ + N G+AL+D+Y KC + A +F M +
Sbjct: 232 LTACAEIGVLALGRRVHVFVAKVGLVGNAHAGNALIDLYAKCGGVDDARKMFGEMGVGRT 291
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VVSWT+++VG NG +A+++F M+R + P + T+ V+ +C++ +++G ++
Sbjct: 292 VVSWTSLIVGLAVNGFGMDALQLFSMMEREKLMPTEITMVGVLYACSHCGLVDDGFRYFD 351
Query: 300 RSLVT-GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGK 356
+ G+ I +V G+ G +E++H M + + V W L+ A K
Sbjct: 352 QMKAEYGITPRIEHLGCMVDLLGRAGRVEEAHNYITTMPLEPNAVVWRTLLGACAMHKK 410
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 235/670 (35%), Positives = 358/670 (53%), Gaps = 64/670 (9%)
Query: 10 NLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHIL 69
N L+ + + + + +Y + ++G L R +F +L S ++LG +IHG
Sbjct: 84 NQLLRQFSRGPTPENTLSLYLHLRRNGFP-LDRFSFPPLLKAVSKLSALNLGLEIHGLAS 142
Query: 70 KFGF-GSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
KFGF + F+ S L+ MYA G I DA R
Sbjct: 143 KFGFFHADPFIQSALIAMYAACGRIMDA-------------------------------R 171
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
LF M +D ++W MI G QN + L+ EM+ G D +VL+AC
Sbjct: 172 FLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAG 231
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV----------------- 231
L GK IH FI N + + ++LV+MY C ++ A V
Sbjct: 232 NLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLS 291
Query: 232 --------------FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFT 277
F M K++V W+AM+ GY ++ EA+++F MQR I PD T
Sbjct: 292 GYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQIT 351
Query: 278 LGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN 337
+ SVIS+CAN+ +L + H + G + ++NAL+ Y KCGN+ + +F M
Sbjct: 352 MLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMP 411
Query: 338 VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH 397
++ +SW+++++ +A G A+ I LF +M ++P+ VT IGVL ACS AGLVE+G+
Sbjct: 412 RKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQK 471
Query: 398 YFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIH 457
+F M+ E+ I P +HY CM+D+ RA L +A I MPFPP+ I W +L+S+C+ H
Sbjct: 472 FFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNH 531
Query: 458 GNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSW 517
G +E+G++AA LLEL+P + + V+LS+IYA + +WD V +R+ M+ KGV K+ CS
Sbjct: 532 GEIELGEFAATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSR 591
Query: 518 IKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLN 577
I+ + VH+F D SD+IY +L+ + ++ GY P S +L D+E EK +++
Sbjct: 592 IEVNNEVHVFMMADRYHKQSDEIYKKLDAVVSQLKLVGYTPSTSGILVDLEEEEKKEVVL 651
Query: 578 HHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFK 637
HSEKLA+ +GL+ IR+VKNLR+C DCH+ K +SK+ + EI++RD RFH F
Sbjct: 652 WHSEKLALCYGLIGERKESCIRIVKNLRICEDCHSFMKLVSKVHRIEIVMRDRTRFHHFN 711
Query: 638 NGECSCGDFW 647
G CSC D+W
Sbjct: 712 GGICSCRDYW 721
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 197/386 (51%), Gaps = 5/386 (1%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D V+WN++I G++ + + +K+Y M G I T+L + +
Sbjct: 177 MSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSG-TEPDAIILCTVLSACAHAGNLSY 235
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ IH I GF + + LV+MYA G ++ A+ +D+LP K++V+ M++G +
Sbjct: 236 GKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAK 295
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G+V+++R +F M +KD + W+ MI+G ++ EA+ LF EM+ + DQ T SV
Sbjct: 296 LGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSV 355
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
++AC + AL + K IH + +N + + +AL+DMY KC ++ A VF M KNV
Sbjct: 356 ISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNV 415
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SW++M+ + +G ++ A+ +F M+ IEP+ T V+ +C++ +EEG +F
Sbjct: 416 ISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSS 475
Query: 301 SLVTGLISFITVS-NALVTFYGKCGNIEDSHRLFNEMNVRDEV-SWTALVSGYAKFGKAN 358
+ IS +V Y + ++ + L M V W +L+S G+
Sbjct: 476 MINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIE 535
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLS 384
++L L+PD + VLS
Sbjct: 536 LGEFAATRLLE--LEPDHDGALVVLS 559
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 148/301 (49%), Gaps = 16/301 (5%)
Query: 186 GLLA----LEEGKQIHAFIIRN--DHKDNVFVGSALVDMYCKCKS---IKYAESVFRTMA 236
GLLA L KQIHA I+R+ D+ + + + L S + YA S+F +
Sbjct: 17 GLLASCKTLRHVKQIHAQILRSKMDNSNLLLLKLVLCCCTLPSPSPSALDYALSLFSHIP 76
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
+L + + E + ++ +++RNG D F+ ++ + + L++L G +
Sbjct: 77 NPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLE 136
Query: 297 FHGRSLVTGLISFIT-VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
HG + G + +AL+ Y CG I D+ LF++M+ RD V+W ++ GY++
Sbjct: 137 IHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNA 196
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR--HYFEIMVKEYGIRPIHD 413
+ + L+E+M + G +PD + L VLSAC+ AG + G+ H F +K+ G R
Sbjct: 197 HYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQF---IKDNGFRVGSH 253
Query: 414 HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL 473
T ++++ + G + A+ +++P + A L ++ G V+ ++ + ++E
Sbjct: 254 IQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKL-GMVQDARFIFDRMVEK 312
Query: 474 D 474
D
Sbjct: 313 D 313
>gi|326528959|dbj|BAJ97501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 514
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/510 (38%), Positives = 313/510 (61%), Gaps = 4/510 (0%)
Query: 140 ISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAF 199
+++ I+ + GL + A+ L EMR G D++T L + LL L +H+
Sbjct: 7 VAYNAAISRCSRAGLHQRALALLHEMRARGHRADEYTLPPALNS-AALLRLP-ADALHSL 64
Query: 200 IIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEA 259
++R ++ V +ALVD Y K A +VF M ++VVSWT++L G ++ + A
Sbjct: 65 LLRAGLAAHLHVANALVDAYAKLSRHGAARAVFDEMPRRDVVSWTSLLTGLARSRSHDSA 124
Query: 260 VKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTF 319
++++ +M G+ PD+F + + +SSCA +LE G H ++ L F++V N+LV+
Sbjct: 125 LQVYRDMVAAGVGPDEFAVAAALSSCAGATALELGRSVHAAAVRLALDPFLSVGNSLVSM 184
Query: 320 YGKCGNIEDSHRLFNEMNVR--DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEV 377
Y K G++ ++ ++F+ V D ++WTAL+ GYA+ G+ E+++++ M+ G +PD V
Sbjct: 185 YAKTGSLGEAKKVFDATRVDRCDPITWTALIVGYAQNGRGRESLEIYADMVRSGCRPDYV 244
Query: 378 TLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINK 437
T IG+L ACS AGLV+ GR +F M E+GI P DHY CM+D+L RAGRL+EA +N+
Sbjct: 245 TFIGLLFACSHAGLVDAGRAHFRSMQAEHGIAPGADHYACMVDLLGRAGRLDEAMDLLNR 304
Query: 438 MPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHV 497
DA W LL++CR H N E+ + AA + LDP + YV+LS++Y+ G+W V
Sbjct: 305 STTRLDATVWKALLAACRTHRNAELAEHAAAMVWRLDPTDAVPYVMLSNLYSRAGRWGDV 364
Query: 498 SQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYV 557
+++R +M+ +G+ K+PGCSW+ H+F +D P + ++Y ++E++ ++ +GYV
Sbjct: 365 ARVRTSMKARGITKEPGCSWVAANGVTHLFYVEDRRHPRAAEVYRKVEEMTERIRGQGYV 424
Query: 558 PDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYI 617
D + L D + K L HHSE+LA+AFGLL +P G PIRV KNLRVC DCH A K +
Sbjct: 425 ADTAWALQDEGPEGREKGLAHHSERLAVAFGLLAVPAGAPIRVFKNLRVCGDCHAAIKMV 484
Query: 618 SKITQREILVRDAVRFHLFKNGECSCGDFW 647
++ REI++RD+ FH K+G CSCGD+W
Sbjct: 485 AQAYGREIVLRDSNCFHHMKDGACSCGDYW 514
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 146/292 (50%), Gaps = 37/292 (12%)
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
+H +L+ G +++ V + LVD YAKL A+ FDE+P +++V
Sbjct: 61 LHSLLLRAGLAAHLHVANALVDAYAKLSRHGAARAVFDEMPRRDVV-------------- 106
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
SWT+++TGL ++ A+ ++R+M G+ D+F + L++
Sbjct: 107 -----------------SWTSLLTGLARSRSHDSALQVYRDMVAAGVGPDEFAVAAALSS 149
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK--NVV 241
C G ALE G+ +HA +R + VG++LV MY K S+ A+ VF + +
Sbjct: 150 CAGATALELGRSVHAAAVRLALDPFLSVGNSLVSMYAKTGSLGEAKKVFDATRVDRCDPI 209
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
+WTA++VGY QNG E+++I+ +M R+G PD T ++ +C++ A L + + H RS
Sbjct: 210 TWTALIVGYAQNGRGRESLEIYADMVRSGCRPDYVTFIGLLFACSH-AGLVDAGRAHFRS 268
Query: 302 LVT--GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
+ G+ +V G+ G ++++ L N R D W AL++
Sbjct: 269 MQAEHGIAPGADHYACMVDLLGRAGRLDEAMDLLNRSTTRLDATVWKALLAA 320
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 30/194 (15%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSW L++G A S + A++VY M+ G+G + L + ++L
Sbjct: 100 MPRRDVVSWTSLLTGLARSRSHDSALQVYRDMVAAGVGP-DEFAVAAALSSCAGATALEL 158
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +H ++ ++ VG+ LV MYAK G + +AK+ FD
Sbjct: 159 GRSVHAAAVRLALDPFLSVGNSLVSMYAKTGSLGEAKKVFD------------------- 199
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ R+ R D I+WT +I G QNG RE+++++ +M G D TF +
Sbjct: 200 ------ATRVDRC----DPITWTALIVGYAQNGRGRESLEIYADMVRSGCRPDYVTFIGL 249
Query: 181 LTACGGLLALEEGK 194
L AC ++ G+
Sbjct: 250 LFACSHAGLVDAGR 263
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 236/647 (36%), Positives = 354/647 (54%), Gaps = 41/647 (6%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG----- 61
VSWN ++ G ++ G + V ML G + + I+++ C
Sbjct: 109 VSWNTMVGGFSAEGDTHGTFDVLRQMLAGG----EDVKADEVTILNAVPVCFHESFLPSL 164
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+++H + LK F V + V YAK G + A+R
Sbjct: 165 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQR----------------------- 201
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
+F G++ K SW +I G Q+ R ++D +M++ GL D FT S+L
Sbjct: 202 --------VFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLL 253
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+AC L +L GK++H FIIRN + ++FV +++ +Y C + +++F M K++V
Sbjct: 254 SACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLV 313
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW ++ GY QNG + A+ +F M GI+ ++ V +C+ L SL G + H +
Sbjct: 314 SWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYA 373
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
L L ++ +L+ Y K G+I S ++FN + + SW A++ GY G A E I
Sbjct: 374 LKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAI 433
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
LFE+M G PD++T +GVL+AC+ +GL+ +G Y + M +G++P HY C+ID+
Sbjct: 434 KLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDM 493
Query: 422 LSRAGRLEEAKSFI-NKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
L RAG+L++A + +M D W +LLSSCRIH N+E+G+ A L EL+P P +
Sbjct: 494 LGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPEN 553
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS++YA GKW+ V ++R+ M E +RKD GCSWI+ +V F + ++I
Sbjct: 554 YVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEI 613
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
+ L K+ K GY PD SV HD+ EKI+ L HSEKLA+ +GL+ G IRV
Sbjct: 614 KSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRV 673
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLR+C DCHNA K ISK+ +REI+VRD RFH FKNG CSCGD+W
Sbjct: 674 YKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 720
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 119/491 (24%), Positives = 221/491 (45%), Gaps = 45/491 (9%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLK---DGLGNLSRITFSTMLIMSSSRRCVDLGRQ 63
VSWN +I + +G ++ + M++ DG T T+L + + R + LG+
Sbjct: 4 VSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKG 63
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
+HG +K + + + L+DMY+K G I +A+
Sbjct: 64 VHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQM------------------------- 98
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL--EGLAMDQFTFGSVL 181
+F+ +K+ +SW TM+ G G D+ R+M E + D+ T + +
Sbjct: 99 ------IFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAV 152
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
C L K++H + ++ + N V +A V Y KC S+ YA+ VF + K V
Sbjct: 153 PVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVN 212
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW A++ G+ Q+ ++ M+ +G+ PD FT+ S++S+C+ L SL G + HG
Sbjct: 213 SWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFI 272
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ L + V ++++ Y CG + LF+ M + VSW +++GY + G + +
Sbjct: 273 IRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRAL 332
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC-MID 420
+F +M+ +G++ ++++ V ACS + GR +K + C +ID
Sbjct: 333 GVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKH--LLEDDAFIACSLID 390
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP--YNP 478
+ ++ G + ++ N + A W ++ IHG + K A + E+ +NP
Sbjct: 391 MYAKNGSITQSSKVFNGLKEKSTA-SWNAMIMGYGIHG---LAKEAIKLFEEMQRTGHNP 446
Query: 479 ASYVLLSSIYA 489
L + A
Sbjct: 447 DDLTFLGVLTA 457
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 178/415 (42%), Gaps = 48/415 (11%)
Query: 137 KDSISWTTMITGLMQNGLEREAIDLFREMRLE----GLAMDQFTFGSVLTACGGLLALEE 192
++ +SW +MI NG E+ L EM E D T +VL C +
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 193 GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
GK +H + ++ + + +AL+DMY KC I A+ +F+ KNVVSW M+ G+
Sbjct: 61 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120
Query: 253 NGCSEEAVKIFCNMQRNG--IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFI 310
G + + M G ++ D+ T+ + + C + + L + H SL +
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 180
Query: 311 TVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH 370
V+NA V Y KCG++ + R+F+ + + SW AL+ G+A+ ++D +M
Sbjct: 181 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS 240
Query: 371 GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEE 430
GL PD T+ +LSACS+ + G+ +++ + R + Y ++ + G L
Sbjct: 241 GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV-YLSVLSLYIHCGELCT 299
Query: 431 AKSFINKMP------------------FPPDAIG----------------WATLLSSCRI 456
++ + M FP A+G + +C +
Sbjct: 300 VQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSL 359
Query: 457 HGNVEIGK----WAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREK 507
++ +G+ +A + LLE D + S + +YA G S++ ++EK
Sbjct: 360 LPSLRLGREAHAYALKHLLEDDAFIACSLI---DMYAKNGSITQSSKVFNGLKEK 411
>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 923
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 241/650 (37%), Positives = 370/650 (56%), Gaps = 37/650 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +SWN +IS + +G+ DA+K +L G R+TFS+ L SS +
Sbjct: 308 MSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGP-DRMTFSSALGACSSPGALMD 366
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +H L+ + VG+ L+ MY K I
Sbjct: 367 GRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSI--------------------------- 399
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMI--TGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
E++ R+F+ M + D +S +I ++++G +A+ +F MR + ++ T
Sbjct: 400 ----EDAERIFQLMPNHDVVSCNILIGSYAVLEDG--TKAMQVFFWMRRGEVKLNYITIV 453
Query: 179 SVLTACGGLLALEE-GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
++L + L G +HA+ I + +V ++L+ MY KC ++ + +VF+ +
Sbjct: 454 NILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIIN 513
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
++VVSW AM+ Q+G EE++K+F +M+ +G D L +SS A+LASLEEG Q
Sbjct: 514 RSVVSWNAMIAANVQHGHGEESLKLFMDMRHDGNGLDHICLAECMSSSASLASLEEGMQL 573
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
HG L GL + V NA + YGKCG +++ ++ + +R + W L+SGYA++G
Sbjct: 574 HGLGLKCGLGNDSHVVNAAMDMYGKCGKMDEMLKMLPDPAIRPQQCWNTLISGYARYGYF 633
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
E + F+ M+S G PD VT + +LSACS AGLV+KG Y+ M +G+ P H C
Sbjct: 634 KEAEETFKHMISVGRTPDYVTFVTLLSACSHAGLVDKGIDYYNSMSSVFGVSPGIKHCVC 693
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
++DIL R GR EA+ FI MP P+ + W +LLSS R H N++IG+ AA+ LLELDP++
Sbjct: 694 IVDILGRLGRFAEAEKFIEDMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKRLLELDPFD 753
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
++YVLLS++YA+ +W V ++R M+ + K P CSW+K K V F D S ++
Sbjct: 754 DSAYVLLSNLYATSARWSDVDRVRSHMKTINLNKIPACSWLKQKKEVSTFGIGDHSHKHA 813
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
D+IY +L+++ K+ + GYV D SS LHD + +K + L +HSEKLA+A+GL+ +P G
Sbjct: 814 DKIYMKLDEILLKLREVGYVADTSSALHDTDEEQKEQNLWNHSEKLALAYGLITVPEGCT 873
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+R+ KNLRVC+DCH K +S + REI++RD RFH FK G CSC DFW
Sbjct: 874 VRIFKNLRVCADCHLVFKLVSMVFDREIVLRDPYRFHHFKGGSCSCSDFW 923
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 135/518 (26%), Positives = 231/518 (44%), Gaps = 76/518 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSWN L+S ++ G + + +V++ M + GL T +++ + +S V
Sbjct: 206 MEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSY 265
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +H L+ G SY+ V + LV+MY+ G + DA+ F + ++++ +NTMI+ +
Sbjct: 266 GSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYV- 324
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
QNG +A+ ++ D+ TF S
Sbjct: 325 ------------------------------QNGNNMDALKTLGQLLHTNEGPDRMTFSSA 354
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC AL +G+ +HA ++ N+ VG++L+ MY KC SI+ AE +F+ M +V
Sbjct: 355 LGACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDV 414
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE-GTQFHG 299
VS ++ Y +A+++F M+R ++ + T+ +++ S + L G H
Sbjct: 415 VSCNILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHA 474
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
++ G +S VSN+L+T Y KCG++E S+ +F + R VSW A+++ + G E
Sbjct: 475 YTIHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEE 534
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG---------------RHYFEIMVK 404
++ LF M G D + L +S+ + +E+G H +
Sbjct: 535 SLKLFMDMRHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMD 594
Query: 405 EYG----------------IRPIHDHYTCMIDILSRAGRLEEAKSFINKM---PFPPDAI 445
YG IRP + +I +R G +EA+ M PD +
Sbjct: 595 MYGKCGKMDEMLKMLPDPAIRP-QQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDYV 653
Query: 446 GWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
+ TLLS+C G V+ G +D YN S V
Sbjct: 654 TFVTLLSACSHAGLVDKG---------IDYYNSMSSVF 682
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 196/441 (44%), Gaps = 49/441 (11%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIM----SSSRRCVDLGRQ 63
SW ISG G + A + M + G+ LS ++++ R C G
Sbjct: 10 SWYTAISGCVRCGRDSTAFSMLRGMRERGVP-LSGFALASLVTACERWEEGRAC---GAA 65
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
IH K G V++G+ L+ +Y + DA+R F E+P
Sbjct: 66 IHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMP------------------- 106
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
+++ +SWT ++ L NG EA+ +R MR E +A + F +V++
Sbjct: 107 ------------ERNVVSWTALMVALSSNGHLEEALGYYRRMRRERIACNANAFATVVSL 154
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
CG L G Q+ + +I + + V V ++L+ M + AE +F M ++ VSW
Sbjct: 155 CGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSW 214
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQFHGRSL 302
A++ Y G ++ ++F +M+R G + D TL S+IS CA+ + G+ H L
Sbjct: 215 NALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCL 274
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
TGL S+I V NALV Y G + D+ LF M+ RD +SW ++S Y + G + +
Sbjct: 275 RTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALK 334
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY----TCM 418
++L PD +T L ACS G + GR MV ++ H +
Sbjct: 335 TLGQLLHTNEGPDRMTFSSALGACSSPGALMDGR-----MVHAMTLQLSLHHNLLVGNSL 389
Query: 419 IDILSRAGRLEEAKSFINKMP 439
I + + +E+A+ MP
Sbjct: 390 ITMYGKCNSIEDAERIFQLMP 410
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 167/324 (51%), Gaps = 10/324 (3%)
Query: 141 SWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQ----I 196
SW T I+G ++ G + A + R MR G+ + F S++TAC EEG+ I
Sbjct: 10 SWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACE---RWEEGRACGAAI 66
Query: 197 HAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCS 256
HA + NV++G+AL+ +Y K + A+ +F M +NVVSWTA++V NG
Sbjct: 67 HALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGHL 126
Query: 257 EEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNAL 316
EEA+ + M+R I + +V+S C +L G Q +V+GL ++V+N+L
Sbjct: 127 EEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSL 186
Query: 317 VTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG-LKPD 375
++ G G + D+ +LF M RD VSW ALVS Y+ G +++ +F M G L+ D
Sbjct: 187 ISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHD 246
Query: 376 EVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFI 435
TL ++S C+ + V G + ++ G+ ++++ S AG+L +A+
Sbjct: 247 ATTLCSLISVCASSDYVSYGSGVHSLCLRT-GLHSYIPVVNALVNMYSSAGKLADAEFLF 305
Query: 436 NKMPFPPDAIGWATLLSSCRIHGN 459
M D I W T++SS +GN
Sbjct: 306 WNMS-RRDLISWNTMISSYVQNGN 328
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 214/465 (46%), Gaps = 40/465 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW L+ +S+G + +A+ Y M ++ + + F+T++ + S
Sbjct: 105 MPERNVVSWTALMVALSSNGHLEEALGYYRRMRRERIA-CNANAFATVVSLCGSLEDEVA 163
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+ H++ G V V + L+ M LG ++DA++ F + E++ V +N +++
Sbjct: 164 GLQVFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSH 223
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL +S R+F M+ + GL R D T S+
Sbjct: 224 EGLCSKSFRVFSDMR---------------RGGLLRH---------------DATTLCSL 253
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
++ C + G +H+ +R + V +ALV+MY + AE +F M+ +++
Sbjct: 254 ISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSRRDL 313
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SW M+ Y QNG + +A+K + PD T S + +C++ +L +G H
Sbjct: 314 ISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGRMVHAM 373
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+L L + V N+L+T YGKC +IED+ R+F M D VS L+ YA +
Sbjct: 374 TLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAVLEDGTKA 433
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP--IHDHY--T 416
+ +F M +K + +T++ +L + + + + + + + Y I + D Y
Sbjct: 434 MQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRN----YGLPLHAYTIHAGFLSDDYVSN 489
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+I + ++ G LE + + ++ + W ++++ HG+ E
Sbjct: 490 SLITMYAKCGDLESSNNVFQRI-INRSVVSWNAMIAANVQHGHGE 533
>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
Length = 690
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 242/660 (36%), Positives = 353/660 (53%), Gaps = 47/660 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW L+ G HG + ++++ M G +T+ R
Sbjct: 65 MPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRA--- 121
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G QIHG ++ GF + V + LV MY+K DA+R FD +P +N+
Sbjct: 122 GVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLA----------- 170
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAMDQFTFGS 179
+W +MI+G G R+++ +FREM R D+FTF S
Sbjct: 171 --------------------TWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFAS 210
Query: 180 VLTACGGLLALEEGKQIHAFI-IRN-DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
+L AC GL A EG Q+HA + +R N + AL+D+Y KC + A VF +
Sbjct: 211 LLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLER 270
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
+N + WT ++VG+ Q G +EA+ +F +G+ D L SV++ A+ A +E+G Q
Sbjct: 271 RNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQV 330
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H + T ++V+N+LV Y KCG ++ R F EM R+ VSWTA+++G K G
Sbjct: 331 HCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHG 390
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
E IDLFE+M + G++ DEV + +LSACS +GLV++ R YF + ++ +RP +HY C
Sbjct: 391 REAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYAC 450
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
M+D+L RAG L EAK I MP P W TLLS+CR+H +V +G+ + LL +D N
Sbjct: 451 MVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDN 510
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF-SADDWSSPY 536
P +YV+LS+I A G+W +R MR KG+RK GCSW + VH F D + P
Sbjct: 511 PVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDKEVHFFYGGGDDAHPQ 570
Query: 537 SDQIYAELEKLNRKMIKE-GYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
+ I L ++ +M + GY D LHDV+ +++ L HSE+LA+ LL G
Sbjct: 571 AGDIRRALREVEARMRERLGYSGDARCALHDVDEESRVESLREHSERLAVGLWLLRDGTG 630
Query: 596 LP--------IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+RV KNLRVC DCH K +S + +R ++VRDA RFH F+NG CSC D+W
Sbjct: 631 DDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSAVVRRVVVVRDANRFHRFQNGACSCRDYW 690
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 201/421 (47%), Gaps = 38/421 (9%)
Query: 42 RITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFD 101
R + +L S+ + G Q+H ++K GFGS + + L+DMYAK G ++ A FD
Sbjct: 4 RRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFD 63
Query: 102 ELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDL 161
+PE ++ +SWT ++ G + +G RE + L
Sbjct: 64 GMPE-------------------------------RNVVSWTALMVGFLHHGEARECLRL 92
Query: 162 FREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK 221
F EMR G + ++FT + L ACGG G QIH +R + + V ++LV MY K
Sbjct: 93 FGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSK 150
Query: 222 CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE-PDDFTLGS 280
+ A VF + +N+ +W +M+ GY G +++ +F MQR E PD+FT S
Sbjct: 151 GRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFAS 210
Query: 281 VISSCANLASLEEGTQFHGRSLVTGL--ISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
++ +C+ L + EG Q H V G+ S ++ AL+ Y KC + + ++F+ +
Sbjct: 211 LLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLER 270
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
R+ + WT ++ G+A+ G+ E + LF + S G++ D L V++ + LVE+G+
Sbjct: 271 RNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQV 330
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
K + ++D+ + G EA +MP + + W +++ HG
Sbjct: 331 HCYTAKTPAGLDV-SVANSLVDMYLKCGLTGEAGRRFREMP-ARNVVSWTAMINGVGKHG 388
Query: 459 N 459
+
Sbjct: 389 H 389
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 141/276 (51%), Gaps = 7/276 (2%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
+L G Q+HA +++ + + + L+DMY KC + A VF M +NVVSWTA++V
Sbjct: 19 SLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMV 78
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
G+ +G + E +++F M+ +G P++FTL + + +C G Q HG + TG
Sbjct: 79 GFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHGVCVRTGFEG 136
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
V+N+LV Y K D+ R+F+ + R+ +W +++SGYA G+ +++ +F +M
Sbjct: 137 HDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQ 196
Query: 369 -SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--TCMIDILSRA 425
H +PDE T +L ACS G +G M G+ P + ++D+ +
Sbjct: 197 RRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVR-GVSPASNAILAGALLDVYVKC 255
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
RL A + + +AI W T++ G V+
Sbjct: 256 HRLPVAMQVFDGLE-RRNAIQWTTVIVGHAQEGQVK 290
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 236/647 (36%), Positives = 354/647 (54%), Gaps = 41/647 (6%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG----- 61
VSWN ++ G ++ G + V ML G + + I+++ C
Sbjct: 359 VSWNTMVGGFSAEGDTHGTFDVLRQMLAGG----EDVKADEVTILNAVPVCFHESFLPSL 414
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+++H + LK F V + V YAK G + A+R
Sbjct: 415 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQR----------------------- 451
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
+F G++ K SW +I G Q+ R ++D +M++ GL D FT S+L
Sbjct: 452 --------VFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLL 503
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+AC L +L GK++H FIIRN + ++FV +++ +Y C + +++F M K++V
Sbjct: 504 SACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLV 563
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW ++ GY QNG + A+ +F M GI+ ++ V +C+ L SL G + H +
Sbjct: 564 SWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYA 623
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
L L ++ +L+ Y K G+I S ++FN + + SW A++ GY G A E I
Sbjct: 624 LKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAI 683
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
LFE+M G PD++T +GVL+AC+ +GL+ +G Y + M +G++P HY C+ID+
Sbjct: 684 KLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDM 743
Query: 422 LSRAGRLEEAKSFI-NKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
L RAG+L++A + +M D W +LLSSCRIH N+E+G+ A L EL+P P +
Sbjct: 744 LGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPEN 803
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS++YA GKW+ V ++R+ M E +RKD GCSWI+ +V F + ++I
Sbjct: 804 YVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEI 863
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
+ L K+ K GY PD SV HD+ EKI+ L HSEKLA+ +GL+ G IRV
Sbjct: 864 KSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRV 923
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLR+C DCHNA K ISK+ +REI+VRD RFH FKNG CSCGD+W
Sbjct: 924 YKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 121/497 (24%), Positives = 224/497 (45%), Gaps = 45/497 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLK---DGLGNLSRITFSTMLIMSSSRRC 57
MP + VSWN +I + +G ++ + M++ DG T T+L + + R
Sbjct: 248 MPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARERE 307
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
+ LG+ +HG +K + + + L+DMY+K G I +A+
Sbjct: 308 IGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQM------------------- 348
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL--EGLAMDQF 175
+F+ +K+ +SW TM+ G G D+ R+M E + D+
Sbjct: 349 ------------IFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEV 396
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
T + + C L K++H + ++ + N V +A V Y KC S+ YA+ VF +
Sbjct: 397 TILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGI 456
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
K V SW A++ G+ Q+ ++ M+ +G+ PD FT+ S++S+C+ L SL G
Sbjct: 457 RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGK 516
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
+ HG + L + V ++++ Y CG + LF+ M + VSW +++GY + G
Sbjct: 517 EVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNG 576
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
+ + +F +M+ +G++ ++++ V ACS + GR +K +
Sbjct: 577 FPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKH--LLEDDAFI 634
Query: 416 TC-MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
C +ID+ ++ G + ++ N + A W ++ IHG + K A + E+
Sbjct: 635 ACSLIDMYAKNGSITQSSKVFNGLKEKSTA-SWNAMIMGYGIHG---LAKEAIKLFEEMQ 690
Query: 475 P--YNPASYVLLSSIYA 489
+NP L + A
Sbjct: 691 RTGHNPDDLTFLGVLTA 707
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 129/541 (23%), Positives = 232/541 (42%), Gaps = 73/541 (13%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
WN +IS ++ + ++ ++ + M+ T+ ++ + V +G +HG
Sbjct: 153 QWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGL 212
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
++K G VFVG+ LV Y G + DA + FD +PE+N+V +N+MI G EES
Sbjct: 213 VVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEES 272
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM-DQFTFGSVLTACGG 186
L M + +NG +G M D T +VL C
Sbjct: 273 FLLLGEMME--------------ENG--------------DGAFMPDVATLVTVLPVCAR 304
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+ GK +H + ++ + + +AL+DMY KC I A+ +F+ KNVVSW M
Sbjct: 305 EREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTM 364
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNG--IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
+ G+ G + + M G ++ D+ T+ + + C + + L + H SL
Sbjct: 365 VGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQ 424
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
+ V+NA V Y KCG++ + R+F+ + + SW AL+ G+A+ ++D
Sbjct: 425 EFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAH 484
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+M GL PD T+ +LSACS+ + G+ +++ + R + Y ++ +
Sbjct: 485 LQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLF-VYLSVLSLYIH 543
Query: 425 AGRLEEAKSFINKMP------------------FPPDAIG----------------WATL 450
G L ++ + M FP A+G +
Sbjct: 544 CGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPV 603
Query: 451 LSSCRIHGNVEIGK----WAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMRE 506
+C + ++ +G+ +A + LLE D + S + +YA G S++ ++E
Sbjct: 604 FGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLI---DMYAKNGSITQSSKVFNGLKE 660
Query: 507 K 507
K
Sbjct: 661 K 661
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 168/354 (47%), Gaps = 37/354 (10%)
Query: 40 LSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRG 99
L R +L S R+ +++GR+IH LV +L R
Sbjct: 82 LVREALGLLLQASGKRKDIEMGRKIH----------------QLVSGSTRL-------RN 118
Query: 100 FDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAI 159
D L + I MY G ++SR +F ++ K+ W +I+ +N L E +
Sbjct: 119 DDVLCTRIITMYAMC-------GSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVL 171
Query: 160 DLFREM-RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDM 218
+ F EM L D FT+ V+ AC G+ + G +H +++ ++VFVG+ALV
Sbjct: 172 ETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSF 231
Query: 219 YCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCN-MQRNG---IEPD 274
Y + A +F M +N+VSW +M+ + NG SEE+ + M+ NG PD
Sbjct: 232 YGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPD 291
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN 334
TL +V+ CA + G HG ++ L + ++NAL+ Y KCG I ++ +F
Sbjct: 292 VATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFK 351
Query: 335 EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG--LKPDEVTLIGVLSAC 386
N ++ VSW +V G++ G + T D+ +ML+ G +K DEVT++ + C
Sbjct: 352 MNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVC 405
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 145/297 (48%), Gaps = 20/297 (6%)
Query: 176 TFGSVLTACGGLLALEEGKQIHAFI-----IRNDHKDNVFVGSALVDMYCKCKSIKYAES 230
G +L A G +E G++IH + +RND + + ++ MY C S +
Sbjct: 86 ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDD----VLCTRIITMYAMCGSPDDSRF 141
Query: 231 VFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLA 289
VF + KN+ W A++ Y +N +E ++ F M + PD FT VI +CA ++
Sbjct: 142 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
+ G HG + TGL+ + V NALV+FYG G + D+ +LF+ M R+ VSW +++
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 261
Query: 350 GYAKFGKANETIDLFEKMLSH----GLKPDEVTLIGVLSACSRAGLV--EKGRHYFEIMV 403
++ G + E+ L +M+ PD TL+ VL C+R + KG H + + +
Sbjct: 262 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL 321
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
+ +++ ++D+ S+ G + A+ I KM + + W T++ G+
Sbjct: 322 RLDKELVLNN---ALMDMYSKCGCITNAQ-MIFKMNNNKNVVSWNTMVGGFSAEGDT 374
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/557 (38%), Positives = 323/557 (57%), Gaps = 35/557 (6%)
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G ++ S LF ++ WT +I G GL +A++ + +M +G+ + FTF S+L
Sbjct: 23 GRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSIL 82
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
C +E GK +H+ ++ +++V + L+D+Y + + A+ +F TM K++V
Sbjct: 83 KLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLV 138
Query: 242 SWTAMLV-------------------------------GYGQNGCSEEAVKIFCNMQRNG 270
S TAML GY QNG EA+ +F M +
Sbjct: 139 SLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAK 198
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
+P++ T+ SV+S+C L +LE G H G+ + V ALV Y KCG++ED+
Sbjct: 199 AKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDAR 258
Query: 331 RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
+F++++ +D V+W +++ GYA G + E + LF+ M GL P +T IG+LSAC +G
Sbjct: 259 LVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSG 318
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATL 450
V +G F M EYGI P +HY CM+++L RAG +E+A + M PD + W TL
Sbjct: 319 WVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTL 378
Query: 451 LSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVR 510
L +CR+HG + +G+ E L++ + N +Y+LLS+IYA+ G WD V++LR M++ GV+
Sbjct: 379 LGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVK 438
Query: 511 KDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELS 570
K+PGCS I+ ++VH F A + P +IY LE++N + GY P VLHD+ +
Sbjct: 439 KEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGET 498
Query: 571 EKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDA 630
EK + L HSEKLAIAFGL+ PG I++VKNLRVC+DCH TK ISKIT R+I+VRD
Sbjct: 499 EKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDR 558
Query: 631 VRFHLFKNGECSCGDFW 647
RFH F NG CSCGD+W
Sbjct: 559 NRFHHFVNGSCSCGDYW 575
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 129/362 (35%), Positives = 204/362 (56%), Gaps = 11/362 (3%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
W +I GHA G A+ Y ML G+ + TFS++L + ++ G+ +H
Sbjct: 43 WTAIIHGHALRGLHEQALNFYAQMLTQGV-EPNAFTFSSILKLCP----IEPGKALHSQA 97
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+K GF S ++V + L+D+YA+ G + A++ FD +PEK++V M+T + G ++ +R
Sbjct: 98 VKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAAR 157
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
LF GM+++D + W MI G QNG+ EA+ LFR M ++ T SVL+ACG L
Sbjct: 158 VLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLG 217
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
ALE G+ +H++I N + NV VG+ALVDMY KC S++ A VF + K+VV+W +M+V
Sbjct: 218 ALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIV 277
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHGRSLVTGLI 307
GY G S+EA+++F +M R G+ P + T ++S+C + + EG F+ G+
Sbjct: 278 GYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIE 337
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKANETIDLFEK 366
I +V G+ G++E ++ L MN+ D V W L+ GK I L EK
Sbjct: 338 PKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGK----IALGEK 393
Query: 367 ML 368
++
Sbjct: 394 IV 395
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 126/264 (47%), Gaps = 37/264 (14%)
Query: 219 YCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
Y + Y+ ++F +V WTA++ G+ G E+A+ + M G+EP+ FT
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
S++ C +E G H +++ G S + V L+ Y + G++ + +LF+ M
Sbjct: 79 SSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 134
Query: 339 RDEVSWTALVSGYAKFGK-------------------------------ANETIDLFEKM 367
+ VS TA+++ YAK G+ NE + LF +M
Sbjct: 135 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 194
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
L KP+EVT++ VLSAC + G +E GR + ++ GI+ T ++D+ S+ G
Sbjct: 195 LKAKAKPNEVTVLSVLSACGQLGALESGR-WVHSYIENNGIQFNVHVGTALVDMYSKCGS 253
Query: 428 LEEAKSFINKMPFPPDAIGWATLL 451
LE+A+ +K+ D + W +++
Sbjct: 254 LEDARLVFDKID-DKDVVAWNSMI 276
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 94/172 (54%), Gaps = 5/172 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M DGV WN++I G+ +G N+A+ ++ MLK + +T ++L ++
Sbjct: 163 MEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLK-AKAKPNEVTVLSVLSACGQLGALES 221
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +H +I G V VG+ LVDMY+K G + DA+ FD++ +K++V +N+MI G
Sbjct: 222 GRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAM 281
Query: 121 RGLVEESRRLFRGM----KDKDSISWTTMITGLMQNGLEREAIDLFREMRLE 168
G +E+ +LF+ M +I++ +++ +G E D+F +M+ E
Sbjct: 282 XGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDE 333
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 67/155 (43%), Gaps = 6/155 (3%)
Query: 320 YGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTL 379
Y G ++ S LF WTA++ G+A G + ++ + +ML+ G++P+ T
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78
Query: 380 IGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP 439
+L C +E G+ VK G T ++D+ +R G + A+ + MP
Sbjct: 79 SSILKLCP----IEPGKALHSQAVK-LGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMP 133
Query: 440 FPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
+ +L+ HG ++ + + + E D
Sbjct: 134 -EKSLVSLTAMLTCYAKHGELDAARVLFDGMEERD 167
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/540 (41%), Positives = 321/540 (59%), Gaps = 32/540 (5%)
Query: 140 ISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG-GLLALEEGKQIHA 198
++W +I+G + G E+ F +M G A T+ SVL+ACG G + G Q+H
Sbjct: 88 VAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHG 147
Query: 199 FIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEE 258
++ + ++ V +ALVDMY +C + A VF M ++VVSWT++L G + G +E
Sbjct: 148 RVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDE 207
Query: 259 A-------------------------------VKIFCNMQRNGIEPDDFTLGSVISSCAN 287
A +++F MQ + + D+FT+ SVI++CA
Sbjct: 208 ARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQ 267
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
L +LE G G+ V NAL+ Y KCG+IE + +F M+ RD+ +WTA+
Sbjct: 268 LGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAI 327
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYG 407
+ G A G E I++F +M+ PDEVT IGVL+AC+ AGLV+KGR +F M++ Y
Sbjct: 328 ILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYN 387
Query: 408 IRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAA 467
I P HY C+ID+L RAG++ EA I++MP P++ W TLL++CR+HGN EIG+ A
Sbjct: 388 IAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVA 447
Query: 468 ESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF 527
E LLELDP N Y+LLS+IYA +W+ V +LR + EKG++K+PGCS I+ +H F
Sbjct: 448 ERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKKEPGCSLIEMDGIIHEF 507
Query: 528 SADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAF 587
A D S P S +IY++LE + + GY PD++ V +V EK K+L HSEKLAIAF
Sbjct: 508 VAGDQSHPMSKEIYSKLESIISDLNNVGYFPDVTEVFVEVAEKEKKKVLYWHSEKLAIAF 567
Query: 588 GLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LL P IR+VKNLR+C DCHNA K IS++ RE++VRD RFH F++G CSC D+W
Sbjct: 568 ALLSSKPNTVIRIVKNLRMCLDCHNAIKLISRLYGREVVVRDRTRFHHFRHGFCSCKDYW 627
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 217/417 (52%), Gaps = 28/417 (6%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V+WN LISGH G ++ + M + G S + R V LG Q+HG
Sbjct: 88 VAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHG 147
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++ G + V + LVDMYA+ + A + FD + +++V + ++++GL R G V+E
Sbjct: 148 RVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDE 207
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+R LF M ++D++SWT MI G + REA+++FREM+ ++ D+FT SV+TAC
Sbjct: 208 ARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQ 267
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L ALE G+ + ++ R K + FVG+AL+DMY KC SI+ A VF+ M ++ +WTA+
Sbjct: 268 LGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAI 327
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
++G NG EEA+++F M R PD+ T V+++C + +++G +F
Sbjct: 328 ILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREF--------F 379
Query: 307 ISFITVSN---------ALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGK 356
+S I N ++ G+ G I ++ ++M + + W L++ G
Sbjct: 380 LSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGN 439
Query: 357 ANETIDLFEKMLSHGLKPDE----VTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
+ + E++L L P+ + L + + C+R V + RH + E GI+
Sbjct: 440 SEIGELVAERLLE--LDPENSMVYILLSNIYAKCNRWEDVRRLRH----AIMEKGIK 490
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 152/341 (44%), Gaps = 40/341 (11%)
Query: 157 EAIDLFREMRLEGLAMDQFTFGSVLTA----CGGLLALEEGKQIHAFIIRNDHKDNVFVG 212
+A+ + M G D +TF ++L A GG + + +HA ++R N V
Sbjct: 2 DAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVA 61
Query: 213 SALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE 272
S+LV Y A ++ V+W A++ G+ + G E+ F +M R G
Sbjct: 62 SSLVAAYTAGGDGAAARALVGEC--DTPVAWNALISGHNRGGRFGESCGSFVDMARAGAA 119
Query: 273 PDDFTLGSVISSCAN-LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHR 331
P T SV+S+C + G Q HGR + +G++ + V NALV Y +C ++ + +
Sbjct: 120 PTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWK 179
Query: 332 LFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH--------------------- 370
+F+ M VR VSWT+L+SG A+ G+ +E DLF++M
Sbjct: 180 VFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREA 239
Query: 371 ----------GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ DE T++ V++AC++ G +E G + + + GI+ +ID
Sbjct: 240 LEMFREMQYSNVSADEFTMVSVITACAQLGALEMG-EWVRVYMSRQGIKMDAFVGNALID 298
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+ S+ G +E A M D W ++ ++G E
Sbjct: 299 MYSKCGSIERALDVFKGM-HHRDKFTWTAIILGLAVNGYEE 338
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 119/296 (40%), Gaps = 47/296 (15%)
Query: 257 EEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA----SLEEGTQFHGRSLVTGLISFITV 312
E+AV + M G PD +T +++ + A A S H + G+ V
Sbjct: 1 EDAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHV 60
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGL 372
+++LV Y G+ + L E + V+W AL+SG+ + G+ E+ F M G
Sbjct: 61 ASSLVAAYTAGGDGAAARALVGECDT--PVAWNALISGHNRGGRFGESCGSFVDMARAGA 118
Query: 373 KPDEVTLIGVLSACSRA------GLVEKGR----------HYFEIMVKEYG--------- 407
P VT + VLSAC + G+ GR +V Y
Sbjct: 119 APTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAW 178
Query: 408 -------IRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS----SCRI 456
+R + +T ++ L+R G+++EA+ ++MP D + W ++ + R
Sbjct: 179 KVFDGMQVRSVVS-WTSLLSGLARLGQVDEARDLFDRMP-ERDTVSWTAMIDGYVWAARF 236
Query: 457 HGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKD 512
+E+ + S + D + S + + A G + +R M +G++ D
Sbjct: 237 REALEMFREMQYSNVSADEFTMVSVI---TACAQLGALEMGEWVRVYMSRQGIKMD 289
>gi|449510831|ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 556
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 235/604 (38%), Positives = 334/604 (55%), Gaps = 59/604 (9%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
TFS +L + G Q+H + K GF + VFV S LVD
Sbjct: 12 TFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVD------------------ 53
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
MY L+ + EE M T L++N
Sbjct: 54 ------MYAKCCDMLMAEKVFEE------------------MPTLLLENLT--------- 80
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
A+D+ +F SV +AC LE GKQ+H ++ + V++ ++L DMY KC
Sbjct: 81 -------ALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCG 133
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
+F ++VV+W M++ Y N E+A F M+R G PD+ + SV+
Sbjct: 134 LFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLH 193
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
SCANLA+L +GT H + + +G + + V+++L+T Y KCG++ D+ ++F E R+ V
Sbjct: 194 SCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVC 253
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
WTA+++ + G AN ++LFE+ML G+KPD +T + VLSACS G VE+G YF M+
Sbjct: 254 WTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMI 313
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
K +GI P H+HY C++D+LSRAG L+ AK FI MP PDA W LLS+CR H N+ +G
Sbjct: 314 KVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMG 373
Query: 464 KWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSR 523
K A L +L+P NP +YVLL +I G + ++RR M GVRK+PGCSWI K+
Sbjct: 374 KEVALKLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNS 433
Query: 524 VHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKL 583
++F+ D S + +IY LEKL + K+GYV + ++ E K + L +HSEK+
Sbjct: 434 TYVFTVHDKSHEKTKEIYEMLEKLKELVKKKGYVAETEFAINTAE-EYKEQSLWYHSEKI 492
Query: 584 AIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSC 643
A+AFGLL +P G PIR+ KNLR C DCH K+ S+I REI+VRD RFH F NG CSC
Sbjct: 493 ALAFGLLSLPAGAPIRIKKNLRTCGDCHTVMKFASEIFAREIIVRDINRFHHFTNGICSC 552
Query: 644 GDFW 647
GD+W
Sbjct: 553 GDYW 556
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 183/408 (44%), Gaps = 68/408 (16%)
Query: 32 MLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLG 91
+L + L L ++FS++ ++ ++ G+Q+HG LK G + V++ + L DMY K G
Sbjct: 74 LLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCG 133
Query: 92 LIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQ 151
L D + F +++V +N MI + E++ F M+ K SI
Sbjct: 134 LFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIP---------- 183
Query: 152 NGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFV 211
D+ ++ SVL +C L AL +G IH IIR+ N+ V
Sbjct: 184 ---------------------DEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRV 222
Query: 212 GSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGI 271
S+L+ MY KC S+ A +F +NVV WTA++ Q+G + V++F M R GI
Sbjct: 223 ASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGI 282
Query: 272 EPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHR 331
+PD T SV+S+C++ +EEG + N+++ +G I H
Sbjct: 283 KPDYITFVSVLSACSHTGRVEEGFFYF---------------NSMIKVHG----IYPGHE 323
Query: 332 LFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGL 391
+ L+S + +A I+L +KPD +LSAC
Sbjct: 324 HY--------ACIVDLLSRAGELDRAKRFIELMP------IKPDASVWGALLSACRNHSN 369
Query: 392 VEKGRHYFEIMVKEYGIRPIHD-HYTCMIDILSRAGRLEEAKSFINKM 438
+ G+ E+ +K + + P + +Y + +IL+R G L EA KM
Sbjct: 370 LIMGK---EVALKLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKM 414
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 141/304 (46%), Gaps = 32/304 (10%)
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
MR G+ + +TF +VL+AC A G+Q+H+ + ++ VFV SALVDMY KC
Sbjct: 1 MRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCD 60
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
+ AE VF M + + TA+ D+ + SV S+
Sbjct: 61 MLMAEKVFEEMPTLLLENLTAL---------------------------DEVSFSSVFSA 93
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
CAN +LE G Q HG +L G+ + + ++N+L YGKCG D +LF+ RD V+W
Sbjct: 94 CANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTW 153
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
++ Y + + F M G PDE + VL +C+ + +G +++
Sbjct: 154 NIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIR 213
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
++ + + +I + ++ G L +A + + + W ++++C+ HG+
Sbjct: 214 SGFVKNLRVA-SSLITMYAKCGSLVDAFQIFEETE-DRNVVCWTAIIAACQQHGH---AN 268
Query: 465 WAAE 468
W E
Sbjct: 269 WVVE 272
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 9/142 (6%)
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE------YGIRPIHDHYTCMID 420
M G+ P+ T VLSAC+ G ++ K + + + D Y D
Sbjct: 1 MRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCD 60
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L EE + + + D + ++++ S+C GN+E GK L+L +N
Sbjct: 61 MLMAEKVFEEMPTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLV- 119
Query: 481 YV--LLSSIYASKGKWDHVSQL 500
Y+ LS +Y G ++ V++L
Sbjct: 120 YINNSLSDMYGKCGLFNDVAKL 141
>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
Length = 690
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 242/660 (36%), Positives = 352/660 (53%), Gaps = 47/660 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW L+ G HG + ++++ M G +T+ R
Sbjct: 65 MPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRA--- 121
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G QIHG ++ GF + V + LV MY+K DA+R FD +P +N+
Sbjct: 122 GVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLA----------- 170
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAMDQFTFGS 179
+W +MI+G G R+++ +FREM R D+FTF S
Sbjct: 171 --------------------TWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFAS 210
Query: 180 VLTACGGLLALEEGKQIHAFI-IRN-DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
+L AC GL A EG Q+HA + +R N + AL+D+Y KC + A VF +
Sbjct: 211 LLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLER 270
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
+N + WT ++VG+ Q G +EA+ +F +G+ D L SV++ A+ A +E+G Q
Sbjct: 271 RNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQV 330
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H + T ++V+N+LV Y KCG ++ R F EM R+ VSWTA+++G K G
Sbjct: 331 HCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHG 390
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
E IDLFE+M G++ DEV + +LSACS +GLV++ R YF + ++ +RP +HY C
Sbjct: 391 REAIDLFEEMQEEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYAC 450
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
M+D+L RAG L EAK I MP P W TLLS+CR+H +V +G+ + LL +D N
Sbjct: 451 MVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDN 510
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF-SADDWSSPY 536
P +YV+LS+I A G+W +R MR KG+RK GCSW + VH F D + P
Sbjct: 511 PVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDKEVHFFYGGGDDAHPQ 570
Query: 537 SDQIYAELEKLNRKMIKE-GYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
+ I L ++ +M + GY D LHDV+ +++ L HSE+LA+ LL G
Sbjct: 571 AGDIRRALREVEARMRERLGYSGDARCALHDVDEESRVESLREHSERLAVGLWLLRDGTG 630
Query: 596 LP--------IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+RV KNLRVC DCH K +S + +R ++VRDA RFH F+NG CSC D+W
Sbjct: 631 DDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSAVVRRVVVVRDANRFHRFQNGACSCRDYW 690
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 201/421 (47%), Gaps = 38/421 (9%)
Query: 42 RITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFD 101
R + +L S+ + G Q+H ++K GFGS + + L+DMYAK G ++ A FD
Sbjct: 4 RRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFD 63
Query: 102 ELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDL 161
+PE ++ +SWT ++ G + +G RE + L
Sbjct: 64 GMPE-------------------------------RNVVSWTALMVGFLHHGEARECLRL 92
Query: 162 FREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK 221
F EMR G + ++FT + L ACGG G QIH +R + + V ++LV MY K
Sbjct: 93 FGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSK 150
Query: 222 CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE-PDDFTLGS 280
+ A VF + +N+ +W +M+ GY G +++ +F MQR E PD+FT S
Sbjct: 151 GRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFAS 210
Query: 281 VISSCANLASLEEGTQFHGRSLVTGL--ISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
++ +C+ L + EG Q H V G+ S ++ AL+ Y KC + + ++F+ +
Sbjct: 211 LLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLER 270
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
R+ + WT ++ G+A+ G+ E + LF + S G++ D L V++ + LVE+G+
Sbjct: 271 RNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQV 330
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
K + ++D+ + G EA +MP + + W +++ HG
Sbjct: 331 HCYTAKTPAGLDV-SVANSLVDMYLKCGLTGEAGRRFREMP-ARNVVSWTAMINGVGKHG 388
Query: 459 N 459
+
Sbjct: 389 H 389
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 141/276 (51%), Gaps = 7/276 (2%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
+L G Q+HA +++ + + + L+DMY KC + A VF M +NVVSWTA++V
Sbjct: 19 SLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMV 78
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
G+ +G + E +++F M+ +G P++FTL + + +C G Q HG + TG
Sbjct: 79 GFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHGVCVRTGFEG 136
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
V+N+LV Y K D+ R+F+ + R+ +W +++SGYA G+ +++ +F +M
Sbjct: 137 HDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQ 196
Query: 369 -SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--TCMIDILSRA 425
H +PDE T +L ACS G +G M G+ P + ++D+ +
Sbjct: 197 RRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVR-GVSPASNAILAGALLDVYVKC 255
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
RL A + + +AI W T++ G V+
Sbjct: 256 HRLPVAMQVFDGLE-RRNAIQWTTVIVGHAQEGQVK 290
>gi|147864762|emb|CAN84062.1| hypothetical protein VITISV_010661 [Vitis vinifera]
Length = 641
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/572 (39%), Positives = 343/572 (59%), Gaps = 32/572 (5%)
Query: 49 LIMSSSR-RCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKN 107
L+ SS+R R G H I++ G + + L++MY+K GL
Sbjct: 53 LLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGL--------------- 97
Query: 108 IVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL 167
VE +R+LF M + +SW TM+ QNG +A+ LF +M+
Sbjct: 98 ----------------VESARKLFDEMPVRSLVSWNTMVGSHTQNGDSEKALVLFMQMQK 141
Query: 168 EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY 227
EG++ +FT SV+ AC + E KQ+H F ++ NVFVG+AL+D+Y KC +K
Sbjct: 142 EGISCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKD 201
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN 287
A VF M ++ V+W++M+ GY QN EEA+ +F Q G+E + FT+ S +S+CA
Sbjct: 202 ASLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAA 261
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
A+L EG Q TG+ S I V ++L+ Y KCG IE+++ +F+ + ++ V W A+
Sbjct: 262 RAALIEGKQVQAVLCKTGIGSNIFVISSLIDMYAKCGIIEEAYIVFSSVEEKNVVLWNAM 321
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYG 407
+SG+++ ++ E + FEKM G+ P+E+T I VL+ACS GLVEKGR YF++M++ +
Sbjct: 322 LSGFSRHVRSLEAMIYFEKMQQMGICPNEITYISVLTACSHLGLVEKGRKYFDLMIRVHN 381
Query: 408 IRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAA 467
+ P HY+CM+DIL RAG L EAK I++MPF A W +LL+SCRI+ N+E + AA
Sbjct: 382 VSPNVLHYSCMVDILGRAGLLHEAKDLIDRMPFDATASMWGSLLASCRIYRNLEXAEVAA 441
Query: 468 ESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF 527
+ L E++P+N ++VLLS+IYA+ +W+ V++ R ++E +K+ G SWI+ K +VH F
Sbjct: 442 KHLFEIEPHNAGNHVLLSNIYAANNRWEEVARARNLLKESKAKKERGKSWIEIKHKVHSF 501
Query: 528 SADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAF 587
+ + P +IY +LE L +M K GY LHDVE S K ++L HHSEKLA+ F
Sbjct: 502 MVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESRKQELLRHHSEKLALTF 561
Query: 588 GLLFIPPGLPIRVVKNLRVCSDCHNATKYISK 619
G++ +P G PIR++KNLR+C DCH+ K S+
Sbjct: 562 GIMVLPHGAPIRIMKNLRICGDCHSFMKLASR 593
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/351 (31%), Positives = 184/351 (52%), Gaps = 34/351 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP VSWN ++ H +G A+ ++ M K+G+ + S T S+++ +++ CV
Sbjct: 108 MPVRSLVSWNTMVGSHTQNGDSEKALVLFMQMQKEGI-SCSEFTVSSVVCACAAKCCVFE 166
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+Q+HG LK S VFVG+ L+D+YAK GL+ DA
Sbjct: 167 CKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDASL---------------------- 204
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+F M ++ ++W++M+ G +QN L EA+ LF + GL +QFT S
Sbjct: 205 ---------VFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSA 255
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+AC AL EGKQ+ A + + N+FV S+L+DMY KC I+ A VF ++ KNV
Sbjct: 256 LSACAARAALIEGKQVQAVLCKTGIGSNIFVISSLIDMYAKCGIIEEAYIVFSSVEEKNV 315
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V W AML G+ ++ S EA+ F MQ+ GI P++ T SV+++C++L +E+G ++
Sbjct: 316 VLWNAMLSGFSRHVRSLEAMIYFEKMQQMGICPNEITYISVLTACSHLGLVEKGRKYFDL 375
Query: 301 SL-VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVS 349
+ V + + + +V G+ G + ++ L + M S W +L++
Sbjct: 376 MIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDLIDRMPFDATASMWGSLLA 426
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/479 (42%), Positives = 307/479 (64%), Gaps = 4/479 (0%)
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS----IKYA 228
++FT+ VL AC G+ L GK +H +++ D V V + LV MYC C+ I++A
Sbjct: 9 NKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEFA 68
Query: 229 ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL 288
VF M + VSW+AM+ GY + G S +A+ +F MQ G+ PD+ T+ SV+S+C L
Sbjct: 69 RKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGL 128
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
+LE G + + +SNAL+ + KCG+++ + LF M R+ VSWT+++
Sbjct: 129 GALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSVI 188
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
G A G+ E + +FE+M+ G+ PD+V IG+LSACS +GLV+KG+ YF+ M K++ I
Sbjct: 189 GGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDFSI 248
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
P +HY CM+D+L RAG ++EA F+ +MP P+ + W TL+++CR HG +++G+
Sbjct: 249 VPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGELKLGEKITR 308
Query: 469 SLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFS 528
L+ +P + ++YVLLS+IYA W+ +++R M KG++K PG + I+ + ++ F
Sbjct: 309 QLIRNEPMHESNYVLLSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTMIELDNEIYEFV 368
Query: 529 ADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFG 588
A D S S +IY ++++ ++M + GY+P + VL D++ +K LN HSEKLAIAF
Sbjct: 369 AGDKSHAQSKEIYEMVDEMGKEMKRAGYMPTTTEVLLDIDDEDKEDTLNRHSEKLAIAFA 428
Query: 589 LLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LL PPG IR+VKNLRVC DCH+A+K+ISKI REI+VRD RFH FKNG CSC DFW
Sbjct: 429 LLNTPPGTLIRIVKNLRVCDDCHSASKFISKIYNREIVVRDRNRFHHFKNGLCSCRDFW 487
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 171/318 (53%), Gaps = 29/318 (9%)
Query: 41 SRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF 100
++ T+ +L + ++LG+ +HG ++KFGFG V V + LV MY RG
Sbjct: 9 NKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYC-------CCRGG 61
Query: 101 DELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAID 160
+ G +E +R++F M DS+SW+ MI G ++ G +AI+
Sbjct: 62 E--------------------GGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAIN 101
Query: 161 LFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYC 220
LFREM+++G+ D+ T SVL+AC GL ALE GK + +++ + + NV + +AL+DM+
Sbjct: 102 LFREMQIKGVCPDEITMVSVLSACTGLGALELGKWVESYVEKERVQKNVELSNALIDMFA 161
Query: 221 KCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGS 280
KC + A ++FR+M +N+VSWT+++ G +G EAV +F M R+G+ PDD
Sbjct: 162 KCGDVDKATNLFRSMRERNIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIG 221
Query: 281 VISSCANLASLEEGTQ-FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
++S+C++ +++G + F ++ I +V + G ++++ + EM +
Sbjct: 222 LLSACSHSGLVDKGKRYFDSMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPID 281
Query: 340 -DEVSWTALVSGYAKFGK 356
+ V W L++ G+
Sbjct: 282 PNPVVWRTLINACRAHGE 299
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 106/190 (55%), Gaps = 6/190 (3%)
Query: 273 PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKC----GNIED 328
P+ FT V+ +CA + +L G HG + G + V N LV Y C G IE
Sbjct: 8 PNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEF 67
Query: 329 SHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
+ ++F+EM D VSW+A++ GY + G++++ I+LF +M G+ PDE+T++ VLSAC+
Sbjct: 68 ARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTG 127
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
G +E G+ + E V++ ++ + +ID+ ++ G +++A + M + + W
Sbjct: 128 LGALELGK-WVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMR-ERNIVSWT 185
Query: 449 TLLSSCRIHG 458
+++ +HG
Sbjct: 186 SVIGGLAMHG 195
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 116/275 (42%), Gaps = 44/275 (16%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW+ +I G+ G +DA+ ++ M G+ IT ++L + ++LG+ +
Sbjct: 79 DSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCP-DEITMVSVLSACTGLGALELGKWV 137
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
++ K V + + L+DM+AK G + A F + E+NIV
Sbjct: 138 ESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIV--------------- 182
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
SWT++I GL +G EA+ +F EM G+ D F +L+AC
Sbjct: 183 ----------------SWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSAC 226
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGS-----ALVDMYCKCKSIKYAESVFRTMAWK- 238
+++GK+ + KD V +VDM C+ +K A + M
Sbjct: 227 SHSGLVDKGKRYFDSM----RKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDP 282
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEP 273
N V W ++ +G + KI + RN EP
Sbjct: 283 NPVVWRTLINACRAHGELKLGEKITRQLIRN--EP 315
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/562 (39%), Positives = 329/562 (58%), Gaps = 32/562 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW +ISG+AS +A+ ++ LM ++ G + F+++L + V+
Sbjct: 169 MPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGE-NEFVFTSVLSALTLPELVNN 227
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIH +K G S V VG+ LV MYAK G + DA + F+
Sbjct: 228 GKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFET------------------ 269
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
DK+SI+W+ MITG Q+G +A+ LF M L G+ +FTF V
Sbjct: 270 -------------SSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGV 316
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ AC L A EGKQ+H ++++ + ++V +ALVDMY KC SI A F + ++
Sbjct: 317 INACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDI 376
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V WT+M+ GY QNG +E+A+ ++ M+ GI P++ T+ SV+ +C++LA+LE+G Q H R
Sbjct: 377 VLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHAR 436
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ G + + +AL T Y KCG ++D +F M RD +SW A++SG ++ G E
Sbjct: 437 TVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEA 496
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++LFE+M G KPD VT + +LSACS GLVE+G YF +M E+G+ P +HY CM+D
Sbjct: 497 LELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVD 556
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
ILSRAG+L+EA F W +L +CR + N E+G +A E L+EL ++
Sbjct: 557 ILSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSA 616
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLSSIY++ G+W+ V ++RR M+ +GV K+PGCSWI+ KS VH+F D P I
Sbjct: 617 YVLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDI 676
Query: 541 YAELEKLNRKMIKEGYVPDMSS 562
+ EL +L+++M EGY P S
Sbjct: 677 HVELRQLSKQMKDEGYEPATDS 698
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 156/475 (32%), Positives = 240/475 (50%), Gaps = 45/475 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDA--VKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGR 62
D VSWN +I+G++ HG + ++++ M + + TF+ + +S+ GR
Sbjct: 70 DVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAH-TFAGVFTAASTLVDAAGGR 128
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
H +K VFVGS L++MY K G
Sbjct: 129 LAHAVAIKMDSCRDVFVGSSLMNMYCK-------------------------------AG 157
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
L E+R++F M +++S+SW TMI+G L EA+ LFR MR E ++F F SVL+
Sbjct: 158 LTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLS 217
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
A + GKQIH ++N V VG+ALV MY KC S+ A F T + KN ++
Sbjct: 218 ALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSIT 277
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL 302
W+AM+ GY Q+G S++A+K+F +M +GI P +FT VI++C++L + EG Q H L
Sbjct: 278 WSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLL 337
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
G S I V ALV Y KC +I D+ + F+ + D V WT+++ GY + G+ + +
Sbjct: 338 KLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALS 397
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR---PIHDHYTCMI 419
L+ +M G+ P+E+T+ VL ACS +E+G+ VK YG PI + M
Sbjct: 398 LYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVK-YGFGLEVPIGSALSTM- 455
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
++ G L++ +MP D I W ++S +G GK A E E+
Sbjct: 456 --YAKCGCLKDGTLVFRRMP-ARDVISWNAMISGLSQNG---CGKEALELFEEMQ 504
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 212/413 (51%), Gaps = 36/413 (8%)
Query: 41 SRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF 100
S +F T L+ + R + G+ +H I+K S V++ + LV++YAK + +AK F
Sbjct: 5 SNRSFFTALLQYTHNRSLQKGKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREAKFVF 63
Query: 101 DELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLE--REA 158
+ + ++KD +SW +I G Q+G
Sbjct: 64 ERI-------------------------------QNKDVVSWNCIINGYSQHGPSGSSHV 92
Query: 159 IDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDM 218
++LF+ MR E A + TF V TA L+ G+ HA I+ D +VFVGS+L++M
Sbjct: 93 MELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNM 152
Query: 219 YCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
YCK A VF TM +N VSW M+ GY + EA+ +F M+R ++F
Sbjct: 153 YCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVF 212
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
SV+S+ + G Q H ++ GL+S ++V NALVT Y KCG+++D+ + F +
Sbjct: 213 TSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSD 272
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
++ ++W+A+++GYA+ G +++ + LF M G++P E T +GV++ACS G +G+
Sbjct: 273 KNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQV 332
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
+ ++K G T ++D+ ++ + +A+ + + PD + W +++
Sbjct: 333 HDYLLK-LGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQ-EPDIVLWTSMI 383
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 87/165 (52%), Gaps = 5/165 (3%)
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
SL++G H + ++ S + ++N+LV Y KC + ++ +F + +D VSW +++
Sbjct: 21 SLQKGKALHAQ-IIKSSSSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIIN 79
Query: 350 GYAKFGKANET--IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYG 407
GY++ G + + ++LF++M + P+ T GV +A S GR + +K
Sbjct: 80 GYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDS 139
Query: 408 IRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
R + + ++++ +AG EA+ + MP +++ WAT++S
Sbjct: 140 CRDVFVG-SSLMNMYCKAGLTPEARKVFDTMP-ERNSVSWATMIS 182
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/591 (37%), Positives = 334/591 (56%), Gaps = 72/591 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGS--VNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCV 58
+P D S+N +++ A HG DA++ M D L+ +F++ L ++ +
Sbjct: 109 IPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDF-VLNAYSFASALSACAAEKDS 167
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G Q+HG + + V + S LVDMYAK E PE
Sbjct: 168 RTGEQVHGLVARSPHADDVHIRSALVDMYAKC-----------ERPE------------- 203
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
++RR+F M +++ +SW ++IT QNG EA+ LF EM G + D+ T
Sbjct: 204 -------DARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLS 256
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKC--------------- 222
SV++AC GL A EG+Q+HA +++ D +D++ + +ALVDMY KC
Sbjct: 257 SVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPS 316
Query: 223 ----------------KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM 266
+++ A+ VF M KNV++W ++ Y QNG EEA+++F +
Sbjct: 317 RSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQL 376
Query: 267 QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI------SFITVSNALVTFY 320
+R+ I P +T G+V+++C N+A L+ G Q H L G S + V N+LV Y
Sbjct: 377 KRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMY 436
Query: 321 GKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLI 380
K G+I+D ++F M RD VSW A++ GYA+ G+A + + LFE+ML PD VT+I
Sbjct: 437 LKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMI 496
Query: 381 GVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF 440
GVLSAC +GLV++GR YF M +++GI P DHYTCM+D+L RAG L+EA+ IN MP
Sbjct: 497 GVLSACGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPM 556
Query: 441 PPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQL 500
PD++ WA+LL +CR+H NVE+G+W A L ELDP N YVLLS++YA GKW V ++
Sbjct: 557 EPDSVLWASLLGACRLHKNVELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRV 616
Query: 501 RRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKM 551
RR+M+++GV K PGCSWI+ ++++F A D P ++I+ L + +M
Sbjct: 617 RRSMKDRGVSKQPGCSWIEIGRKMNVFLARDKRHPCRNEIHNTLRIIQMEM 667
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 211/430 (49%), Gaps = 40/430 (9%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
R H ILK F+ + LV YA+LG + DA+R FDE+P +N YN +++ R
Sbjct: 36 ARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAYAR 95
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGL--EREAIDLFREMRLEGLAMDQFTFG 178
G +E+R LF + D D S+ ++ L ++G +A+ M + ++ ++F
Sbjct: 96 LGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFA 155
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
S L+AC G+Q+H + R+ H D+V + SALVDMY KC+ + A VF M +
Sbjct: 156 SALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPER 215
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
NVVSW +++ Y QNG EA+ +F M G PD+ TL SV+S+CA LA+ EG Q H
Sbjct: 216 NVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVH 275
Query: 299 GRSL-VTGLISFITVSNALVTFYGKCG-------------------------------NI 326
+ L + ++NALV Y KCG N+
Sbjct: 276 AHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANV 335
Query: 327 EDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSAC 386
ED+ +F++M ++ ++W L++ YA+ G+ E I LF ++ + P T VL+AC
Sbjct: 336 EDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNAC 395
Query: 387 SRAGLVEKGRHYFEIMVKE---YGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPFP 441
++ G+ ++KE + P D + ++D+ + G +++ +M
Sbjct: 396 GNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMA-A 454
Query: 442 PDAIGWATLL 451
D + W ++
Sbjct: 455 RDNVSWNAMI 464
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/591 (37%), Positives = 336/591 (56%), Gaps = 70/591 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D S+N +++ A HG DA++ M D L+ +F++ L +S +
Sbjct: 107 IPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDF-VLNAYSFASALSACASEKASRT 165
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+H + K GS V++G+ LVDMYAK E PE
Sbjct: 166 GEQVHALVTKSSHGSDVYIGTALVDMYAKC-----------ERPE--------------- 199
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
E++++F M +++ +SW ++IT QNG EA+ LF M +G D+ T SV
Sbjct: 200 -----EAQKVFDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASV 254
Query: 181 LTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKC----------------- 222
++AC GL A EG+Q+H ++++D ++++ + +ALVDMY KC
Sbjct: 255 MSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRS 314
Query: 223 --------------KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR 268
++ A++VF M KNVV+W ++ Y N EEA+++F ++R
Sbjct: 315 VVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKR 374
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFH------GRSLVTGLISFITVSNALVTFYGK 322
+ P +T G+V+++CANLA+L+ G Q H G +G S + V N+LV Y K
Sbjct: 375 ESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLK 434
Query: 323 CGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGV 382
G+I D ++F M RD VSW A++ GYA+ G+A + + LFE+ML +PD VT+IGV
Sbjct: 435 TGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGV 494
Query: 383 LSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPP 442
LSAC +GLV++GR YF+ M +++GI P DHYTCMID+L RAG L+E + I MP P
Sbjct: 495 LSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPMEP 554
Query: 443 DAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRR 502
DA+ WA+LL +CR+H N+++G+WAA L ELDP N YVLLS++YA GKW V ++RR
Sbjct: 555 DAVLWASLLGACRLHKNIDMGEWAAGKLFELDPDNSGPYVLLSNMYAELGKWADVFRVRR 614
Query: 503 TMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIK 553
+M+ +GV K PGCSWI+ +V++F A D P ++I+ L + +M +
Sbjct: 615 SMKHRGVSKQPGCSWIEIGRKVNVFLARDNIHPCRNEIHDTLRIIQMQMSR 665
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 213/417 (51%), Gaps = 40/417 (9%)
Query: 73 FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFR 132
F F+ + L+ YA+LG ++DA+R FD +P +N YN +++ R G +++ LF
Sbjct: 46 FAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFG 105
Query: 133 GMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEE 192
+ D D S+ ++ L Q+G +A+ M + ++ ++F S L+AC A
Sbjct: 106 AIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRT 165
Query: 193 GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
G+Q+HA + ++ H +V++G+ALVDMY KC+ + A+ VF M +N+VSW +++ Y Q
Sbjct: 166 GEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQ 225
Query: 253 NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI-SFIT 311
NG +EA+ +F M ++G PD+ TL SV+S+CA LA+ EG Q H R + + +
Sbjct: 226 NGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMV 285
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK---FGKAN---------- 358
++NALV Y KCG ++ +F+ M +R VS T++++GYAK G A
Sbjct: 286 LNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKN 345
Query: 359 ------------------ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
E + LF ++ + P T VL+AC+ ++ G+
Sbjct: 346 VVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHV 405
Query: 401 IMVKEYGIR----PIHDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
++KE G R P D + ++D+ + G + + +M D + W ++
Sbjct: 406 HVLKE-GFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMA-ARDNVSWNAMI 460
>gi|302785459|ref|XP_002974501.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
gi|300158099|gb|EFJ24723.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
Length = 635
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/607 (36%), Positives = 345/607 (56%), Gaps = 50/607 (8%)
Query: 55 RRC-----VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIV 109
RRC + G++IH HI+ GF S ++ + LV+MY K G + AK F P +N+
Sbjct: 65 RRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCNLLVEMYGKCGSLQAAKSVFHITPRRNV- 123
Query: 110 MYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG 169
SWT M+ NG +A++L M LEG
Sbjct: 124 ------------------------------FSWTIMVAAFAHNGHYMDALNLLEIMDLEG 153
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
++ + TF +L A L L+ G+ +H I ++FV + L++MY KC+S+ A
Sbjct: 154 ISPNSITFIELLGAVAALSWLDRGRALHRRIACCGFLADIFVANCLINMYAKCRSLADAC 213
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
SVF ++ ++V++WTA++ Y NG +A+K+F M +G+EP + T +V+ CA++A
Sbjct: 214 SVFESLTSRSVIAWTALVAAYALNGFFRDALKVFLLMTLDGVEPTEVTFVTVVDVCADIA 273
Query: 290 SLEEGTQFHG----RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
G + HG RS + V NAL+ YGKC + +++ ++F+ M +D ++W
Sbjct: 274 VFGIGREVHGVIDARSEAN-----VCVGNALINMYGKCASPDEARKVFDAMQRKDIITWN 328
Query: 346 ALVSGYAKFGKANETIDLFEKMLSH-----GLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
++++ Y + G + ++++++M G+ D++T IGVL ACS AGLV+ +
Sbjct: 329 SMIAVYGQNGYGFQALEIYKRMQESRMTILGITHDDITFIGVLFACSHAGLVKDSCKLYS 388
Query: 401 IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
M+ +YG +P C+ID+L RAG L+EA+ FIN MP+ PD W LL +C H +V
Sbjct: 389 SMIGDYGFKPTSLQCGCLIDLLGRAGWLDEAEEFINSMPYHPDHTIWTILLGACITHADV 448
Query: 461 EIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKY 520
E AA+ ++ L P + SYV LS++YA +WD ++++R+ M ++GV K G S I+
Sbjct: 449 ERAARAADRIMALRPTDSGSYVALSNLYALAERWDDMARMRKLMDQRGVFKMAGKSSIEI 508
Query: 521 KSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHS 580
+H F A D S P +IY EL ++ + + GYVPD+ +VLH+ K KM HS
Sbjct: 509 GGVLHEFIAGDTSHPRKREIYEELRRIEGVIRERGYVPDIKAVLHNAAREAKEKMCCFHS 568
Query: 581 EKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGE 640
E+LAIAFG++ P G +R++KNLRVC DCH+ATK ISK + R+I+VRDA RFH F+NG
Sbjct: 569 ERLAIAFGMISSPGGTELRIMKNLRVCPDCHSATKIISKFSGRKIIVRDANRFHEFRNGS 628
Query: 641 CSCGDFW 647
CSC D+W
Sbjct: 629 CSCEDYW 635
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 171/358 (47%), Gaps = 44/358 (12%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P + SW ++++ A +G DA+ + +M +G+ S ITF +L ++ +D G
Sbjct: 119 PRRNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGISPNS-ITFIELLGAVAALSWLDRG 177
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
R +H I GF + +FV + L++MYAK + DA F+ L +++
Sbjct: 178 RALHRRIACCGFLADIFVANCLINMYAKCRSLADACSVFESLTSRSV------------- 224
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
I+WT ++ NG R+A+ +F M L+G+ + TF +V+
Sbjct: 225 ------------------IAWTALVAAYALNGFFRDALKVFLLMTLDGVEPTEVTFVTVV 266
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
C + G+++H +I + NV VG+AL++MY KC S A VF M K+++
Sbjct: 267 DVCADIAVFGIGREVHG-VIDARSEANVCVGNALINMYGKCASPDEARKVFDAMQRKDII 325
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRN-----GIEPDDFTLGSVISSCANLASLEEGTQ 296
+W +M+ YGQNG +A++I+ MQ + GI DD T V+ +C++ +++ +
Sbjct: 326 TWNSMIAVYGQNGYGFQALEIYKRMQESRMTILGITHDDITFIGVLFACSHAGLVKDSCK 385
Query: 297 FHGRSLVTGLISFITVS---NALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
+ S + G F S L+ G+ G ++++ N M D WT L+
Sbjct: 386 LY--SSMIGDYGFKPTSLQCGCLIDLLGRAGWLDEAEEFINSMPYHPDHTIWTILLGA 441
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 138/276 (50%), Gaps = 11/276 (3%)
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L CG A+ EGK+IH I+ K + ++ + LV+MY KC S++ A+SVF +NV
Sbjct: 64 LRRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCNLLVEMYGKCGSLQAAKSVFHITPRRNV 123
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
SWT M+ + NG +A+ + M GI P+ T ++ + A L+ L+ G H R
Sbjct: 124 FSWTIMVAAFAHNGHYMDALNLLEIMDLEGISPNSITFIELLGAVAALSWLDRGRALHRR 183
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
G ++ I V+N L+ Y KC ++ D+ +F + R ++WTALV+ YA G +
Sbjct: 184 IACCGFLADIFVANCLINMYAKCRSLADACSVFESLTSRSVIAWTALVAAYALNGFFRDA 243
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC--- 417
+ +F M G++P EVT + V+ C+ + GR + I + C
Sbjct: 244 LKVFLLMTLDGVEPTEVTFVTVVDVCADIAVFGIGREVHGV------IDARSEANVCVGN 297
Query: 418 -MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+I++ + +EA+ + M D I W ++++
Sbjct: 298 ALINMYGKCASPDEARKVFDAMQ-RKDIITWNSMIA 332
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 91/193 (47%), Gaps = 2/193 (1%)
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
++ + P L + C + A++ EG + H ++ G S + N LV YGKCG+
Sbjct: 48 LEDRSVSPSAEVLAWYLRRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCNLLVEMYGKCGS 107
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
++ + +F+ R+ SWT +V+ +A G + ++L E M G+ P+ +T I +L A
Sbjct: 108 LQAAKSVFHITPRRNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGISPNSITFIELLGA 167
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
+ +++GR + G C+I++ ++ L +A S + I
Sbjct: 168 VAALSWLDRGRALHR-RIACCGFLADIFVANCLINMYAKCRSLADACSVFESLT-SRSVI 225
Query: 446 GWATLLSSCRIHG 458
W L+++ ++G
Sbjct: 226 AWTALVAAYALNG 238
>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/642 (34%), Positives = 357/642 (55%), Gaps = 38/642 (5%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL--GRQIH 65
+WN L++ H+ S ++A++V+ + + + T L +S+ R DL G +
Sbjct: 71 AWNALLAAHSRGASPHEALRVFRALPPAARPDSTTFT----LALSACARLGDLATGEVVT 126
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
G+G+ +FV S ++++YAK G + DA + FD
Sbjct: 127 DRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDR----------------------- 163
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
M+ +D ++W+TM+TG + G +AI+++ MR +GL D+ V+ AC
Sbjct: 164 --------MRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACA 215
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
G +H +++R+ + +V + ++LVDMY K A VF M +N VSW+A
Sbjct: 216 ATGDARMGASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRVFELMPHRNDVSWSA 275
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
++ Q G ++EA+ +F MQ +G+ P+ + + +C++L L+ G HG L T
Sbjct: 276 LISQLAQYGNADEALGLFRMMQVSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILRTL 335
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
+ + V A++ Y KCG++ + LF+++ RD +SW +++ G+ + + LF+
Sbjct: 336 ELDRM-VGTAVIDMYSKCGSLSSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQ 394
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
+M + ++PD T +LSA S +GLVE+G+ +F MV EYGI P H C++D+L+R+
Sbjct: 395 EMKRNEVRPDHATFASLLSALSHSGLVEEGKFWFNCMVNEYGIEPGEKHLVCIVDLLARS 454
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
G +EEA + + P LLS C + +E+G+ AE +LEL P + L+S
Sbjct: 455 GLVEEANGLVASLHSKPTISILVALLSGCLNNNKLELGESTAEKILELQPGDVGVLALVS 514
Query: 486 SIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELE 545
++YA+ W V ++R+ M++ G +K PGCS I+ + +H F +D S P QI +
Sbjct: 515 NLYAAAKNWYKVREVRKLMKDHGSKKAPGCSSIEIRGALHTFVMEDQSHPQHRQILQMVM 574
Query: 546 KLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
KL+ +M K GY+P V HD+E K ++L+ HSE+LA AFGLL PG + V+KNLR
Sbjct: 575 KLDSEMRKMGYIPKTEFVYHDLEEGVKEQLLSRHSERLATAFGLLNTSPGTRLVVIKNLR 634
Query: 606 VCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VC DCH+A KY+SKI REI+VRDA RFH FK+G CSCGD+W
Sbjct: 635 VCGDCHDAIKYMSKIADREIVVRDAKRFHHFKDGACSCGDYW 676
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 189/387 (48%), Gaps = 39/387 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D V+W+ +++G + G A+++Y M +DGL + M +++ +
Sbjct: 164 MRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGD-ARM 222
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +HG++L+ V + + LVDMYAK GL A+R F+ +P +N V ++ +I+ L +
Sbjct: 223 GASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQ 282
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G + EA+ LFR M++ GL +
Sbjct: 283 YGNAD-------------------------------EALGLFRMMQVSGLHPNSGPVVGA 311
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L L+ GK IH FI+R D + VG+A++DMY KC S+ A+ +F + +++
Sbjct: 312 LLACSDLGLLKLGKSIHGFILRTLELDRM-VGTAVIDMYSKCGSLSSAQMLFDKVVSRDL 370
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SW M+ G +G +A+ +F M+RN + PD T S++S+ ++ +EEG +F
Sbjct: 371 ISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSALSHSGLVEEG-KFWFN 429
Query: 301 SLVT--GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKA 357
+V G+ +V + G +E+++ L ++ + +S AL+SG K
Sbjct: 430 CMVNEYGIEPGEKHLVCIVDLLARSGLVEEANGLVASLHSKPTISILVALLSGCLNNNKL 489
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLS 384
EK+L L+P +V ++ ++S
Sbjct: 490 ELGESTAEKILE--LQPGDVGVLALVS 514
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 143/285 (50%), Gaps = 9/285 (3%)
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIKYAESVFRT--MA 236
+L++C L L ++HA +I + + + S L Y + + AES T +
Sbjct: 9 LLSSCAALRTL---TRLHALLIVSSSASCHHILSSCLATAYARAGDLAAAESTLATAPTS 65
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
++ +W A+L + + EA+++F + PD T +S+CA L L G
Sbjct: 66 PSSIPAWNALLAAHSRGASPHEALRVFRALP-PAARPDSTTFTLALSACARLGDLATGEV 124
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
R+ G + I V ++++ Y KCG ++D+ ++F+ M RD V+W+ +V+G+ G+
Sbjct: 125 VTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQ 184
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
+ I+++ +M GL+ DEV ++GV+ AC+ G G +++ + ++ T
Sbjct: 185 PVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLR-HAMQMDVVIST 243
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
++D+ ++ G ++A+ MP D + W+ L+S +GN +
Sbjct: 244 SLVDMYAKNGLFDQARRVFELMPHRND-VSWSALISQLAQYGNAD 287
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 200/535 (37%), Positives = 323/535 (60%), Gaps = 1/535 (0%)
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
+I+ + G + +RRLF + + DS + +++ + G + + +R M G
Sbjct: 65 LISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQS 124
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
+TF SV+ AC L AL GK+IH+ ++ + +++V +AL+ +Y K +K A+ VF
Sbjct: 125 NYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFD 184
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE 293
M + +++W +++ GY QNG +E++ +F M +G +PD T+ S++SSC+ L +L+
Sbjct: 185 AMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDF 244
Query: 294 GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK 353
G H + G + + +L+ Y +CGN+ + +F+ M R+ V+WTA++SGY
Sbjct: 245 GCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGM 304
Query: 354 FGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
G + ++LF +M ++G +P+ +T + VLSAC+ +GL++ GR F M + YG+ P +
Sbjct: 305 HGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVE 364
Query: 414 HYTCMIDILSRAGRLEEAKSFINK-MPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLE 472
H CM+D+ RAG L +A FI K +P P W ++L +CR+H N ++G AE +L
Sbjct: 365 HNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLS 424
Query: 473 LDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDW 532
++P NP YV+LS+IYA G+ D V +R M + ++K G S I+ + ++FS D
Sbjct: 425 VEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDK 484
Query: 533 SSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFI 592
S P ++ IY L++L + + GYVP S++HD+E E+ L +HSEKLA+AFGLL
Sbjct: 485 SHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKT 544
Query: 593 PPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G IR+VKNLR+C DCH+A K+IS I REI+VRD RFH FK+G CSC D+W
Sbjct: 545 NQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCLDYW 599
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 188/375 (50%), Gaps = 39/375 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D ++ L+ + G D V Y ML G S TF++++ + + L
Sbjct: 85 VPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQ-SNYTFTSVIKACADLSALRL 143
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G++IH H++ G+GS ++V + L+ +YAK + AK+ FD +P++ I+ +N++I+G +
Sbjct: 144 GKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQ 203
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL +ES I LF M G D T S+
Sbjct: 204 NGLPQES-------------------------------IGLFHLMMESGFQPDSATIVSL 232
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L++C L AL+ G +H + N NV +G++L++MY +C ++ A VF +M +NV
Sbjct: 233 LSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNV 292
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
V+WTAM+ GYG +G +A+++F M+ G P++ T +V+S+CA+ +++G + F
Sbjct: 293 VTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSS 352
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD--EVSWTALVSGYAKFGKA 357
GL+ + + +V +G+ G + D+++ + ++ WT+++ +
Sbjct: 353 MKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGA----CRM 408
Query: 358 NETIDLFEKMLSHGL 372
+ DL K+ H L
Sbjct: 409 HRNFDLGVKVAEHVL 423
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 83/207 (40%), Gaps = 41/207 (19%)
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
Q H +V+GL ++ L++ G+I + RLF + D + +L+ +KFG
Sbjct: 45 QVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFG 104
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH-YFEIMVKEYGIRPIHDH 414
+ +T+ + +ML G T V+ AC+ + G+ + +MV YG D
Sbjct: 105 FSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYG----SDM 160
Query: 415 Y--TCMIDILSRAGRLEEAKSFINKMP--------------------------------- 439
Y +I + ++A ++ AK + MP
Sbjct: 161 YVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMES 220
Query: 440 -FPPDAIGWATLLSSCRIHGNVEIGKW 465
F PD+ +LLSSC G ++ G W
Sbjct: 221 GFQPDSATIVSLLSSCSQLGALDFGCW 247
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/591 (37%), Positives = 338/591 (57%), Gaps = 34/591 (5%)
Query: 58 VDLGRQIHGHILKFGFGSYV-FVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMIT 116
V GR +HG +++ + F+G L+++YA G + D + F+ + EK I
Sbjct: 515 VKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTI-------- 566
Query: 117 GLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
+SW T+I+ +NG EA+ LF +M+ +GL D ++
Sbjct: 567 -----------------------LSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYS 603
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
S L+ACG + + G QIH +II+ + N FV +AL+DMY KC + A +F +
Sbjct: 604 LASSLSACGTISFSQLGAQIHGYIIKTGNF-NDFVQNALIDMYAKCGFVHSANKMFEKIK 662
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
K++V+W +M+ G+ QNG S EA+ +F M N ++ D T SVI +C++L LE+G
Sbjct: 663 EKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKW 722
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H + ++ GL + AL Y KCG ++ +H +F+ M+ R VSW+ +++GY G+
Sbjct: 723 VHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQ 782
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
N TI LF +ML G+KP+++T + +LSACS AG VE+G+ YF M E+G+ P HDH+
Sbjct: 783 INATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSM-SEFGVEPKHDHFA 841
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY 476
CM+D+LSRAG L A I +PFP ++ W LL+ CRIH ++I K ++LL++D
Sbjct: 842 CMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTA 901
Query: 477 NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPY 536
+ Y LLS+IYA +G WD ++R M+ KG+RK PG S I+ +++ F D S
Sbjct: 902 DTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQ 961
Query: 537 SDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGL 596
+ IY LE + + Y + + + K + HSEKLAIAFG++ PG
Sbjct: 962 TKDIYRFLENFRSLVHAQVYDSEPDNSIVGTSKFNKENNVVSHSEKLAIAFGIINTRPGT 1021
Query: 597 PIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+R+ KNLRVC DCH+ K SKIT REI++RD RFH F+NG CSC D+W
Sbjct: 1022 TLRISKNLRVCRDCHSFAKIASKITGREIIMRDLNRFHCFRNGSCSCNDYW 1072
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 126/445 (28%), Positives = 230/445 (51%), Gaps = 32/445 (7%)
Query: 43 ITFSTMLIMSSSRRCVDLGR--QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF 100
T ++ ++S +RC Q+H H+ G + + L++ YA++G+ +KR F
Sbjct: 344 FTLNSSRSLTSHKRCATSTTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVF 403
Query: 101 DELPEKNIVMYNTMITGLLRRGLVEESRRLFRGM--KDKDSISWTTMITGLM-------- 150
D P+ + M+ +I + G EE+ L+ M +D+ IS + L
Sbjct: 404 DTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDL 463
Query: 151 ----QNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC--------GGLLALEEGKQIHA 198
+NG E +D+F +M E + D T SV AC G L ++EG+ +H
Sbjct: 464 SVGGKNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHG 523
Query: 199 FIIRNDHKDNV-FVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSE 257
F+IR + F+G AL+++Y +++ VF T+ K ++SW ++ + +NG E
Sbjct: 524 FVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPE 583
Query: 258 EAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALV 317
EA+ +F MQ G+ PD ++L S +S+C ++ + G Q HG + TG + V NAL+
Sbjct: 584 EALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDF-VQNALI 642
Query: 318 TFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEV 377
Y KCG + ++++F ++ + V+W +++ G+++ G + E I LF++M + +K D++
Sbjct: 643 DMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKL 702
Query: 378 TLIGVLSACSRAGLVEKGR--HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFI 435
T + V+ ACS G +EKG+ H+ IM YG+R T + D+ S+ G L+ A
Sbjct: 703 TFLSVIQACSHLGYLEKGKWVHHKLIM---YGLRKDSYLDTALTDMYSKCGELQMAHGVF 759
Query: 436 NKMPFPPDAIGWATLLSSCRIHGNV 460
++M + W+ +++ +HG +
Sbjct: 760 DRMS-ERSIVSWSVMIAGYGMHGQI 783
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 181/364 (49%), Gaps = 37/364 (10%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
+SWN LIS +G +A+ ++ M GL + ++ L + LG QIHG
Sbjct: 567 LSWNTLISIFTRNGQPEEALLLFVQMQTQGLMP-DSYSLASSLSACGTISFSQLGAQIHG 625
Query: 67 HILKFG-FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
+I+K G F FV + L+DMYAK G ++ A + F+++ EK++V +N+MI
Sbjct: 626 YIIKTGNFND--FVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMI---------- 673
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
G QNG EAI LF +M + + MD+ TF SV+ AC
Sbjct: 674 ---------------------CGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACS 712
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
L LE+GK +H +I + + ++ +AL DMY KC ++ A VF M+ +++VSW+
Sbjct: 713 HLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSV 772
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
M+ GYG +G + +F M +GI+P+D T ++S+C++ ++EEG + G
Sbjct: 773 MIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSEFG 832
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKANETIDLF 364
+ +V + G++ ++++ + S W AL++G + K + I
Sbjct: 833 VEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNG-CRIHKRIDIIKSI 891
Query: 365 EKML 368
EK L
Sbjct: 892 EKNL 895
>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
Length = 886
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 242/660 (36%), Positives = 353/660 (53%), Gaps = 47/660 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW L+ G HG + ++++ M G +T+ R
Sbjct: 261 MPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRA--- 317
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G QIHG ++ GF + V + LV MY+K DA+R FD +P +N+
Sbjct: 318 GVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLA----------- 366
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAMDQFTFGS 179
+W +MI+G G R+++ +FREM R D+FTF S
Sbjct: 367 --------------------TWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFAS 406
Query: 180 VLTACGGLLALEEGKQIHAFI-IRN-DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
+L AC GL A EG Q+HA + +R N + AL+D+Y KC + A VF +
Sbjct: 407 LLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLER 466
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
+N + WT ++VG+ Q G +EA+ +F +G+ D L SV++ A+ A +E+G Q
Sbjct: 467 RNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQV 526
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H + T ++V+N+LV Y KCG ++ R F EM R+ VSWTA+++G K G
Sbjct: 527 HCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHG 586
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
E IDLFE+M + G++ DEV + +LSACS +GLV++ R YF + ++ +RP +HY C
Sbjct: 587 REAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYAC 646
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
M+D+L RAG L EAK I MP P W TLLS+CR+H +V +G+ + LL +D N
Sbjct: 647 MVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDN 706
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF-SADDWSSPY 536
P +YV+LS+I A G+W +R MR KG+RK GCSW + VH F D + P
Sbjct: 707 PVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDKEVHFFYGGGDDAHPQ 766
Query: 537 SDQIYAELEKLNRKMIKE-GYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
+ I L ++ +M + GY D LHDV+ +++ L HSE+LA+ LL G
Sbjct: 767 AGDIRRALREVEARMRERLGYSGDARCALHDVDEESRVESLREHSERLAVGLWLLRDGTG 826
Query: 596 LP--------IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+RV KNLRVC DCH K +S + +R ++VRDA RFH F+NG CSC D+W
Sbjct: 827 DDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSAVVRRVVVVRDANRFHRFQNGACSCRDYW 886
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 194/402 (48%), Gaps = 38/402 (9%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+H ++K GFGS + + L+DMYAK G ++ A FD
Sbjct: 219 GVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFD------------------- 259
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GM +++ +SWT ++ G + +G RE + LF EMR G + ++FT +
Sbjct: 260 ------------GMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSAT 307
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L ACGG G QIH +R + + V ++LV MY K + A VF + +N+
Sbjct: 308 LKACGG--GTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNL 365
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE-PDDFTLGSVISSCANLASLEEGTQFHG 299
+W +M+ GY G +++ +F MQR E PD+FT S++ +C+ L + EG Q H
Sbjct: 366 ATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHA 425
Query: 300 RSLVTGL--ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
V G+ S ++ AL+ Y KC + + ++F+ + R+ + WT ++ G+A+ G+
Sbjct: 426 AMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQV 485
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
E + LF + S G++ D L V++ + LVE+G+ K +
Sbjct: 486 KEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDV-SVANS 544
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
++D+ + G EA +MP + + W +++ HG+
Sbjct: 545 LVDMYLKCGLTGEAGRRFREMP-ARNVVSWTAMINGVGKHGH 585
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 154/311 (49%), Gaps = 11/311 (3%)
Query: 154 LEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGS 213
++ AIDL + +E M +L A +L G Q+HA +++ + + +
Sbjct: 184 IQLRAIDLLGFLPMERRRM----IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNN 239
Query: 214 ALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEP 273
L+DMY KC + A VF M +NVVSWTA++VG+ +G + E +++F M+ +G P
Sbjct: 240 NLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSP 299
Query: 274 DDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLF 333
++FTL + + +C G Q HG + TG V+N+LV Y K D+ R+F
Sbjct: 300 NEFTLSATLKACG--GGTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVF 357
Query: 334 NEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML-SHGLKPDEVTLIGVLSACSRAGLV 392
+ + R+ +W +++SGYA G+ +++ +F +M H +PDE T +L ACS G
Sbjct: 358 DVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAA 417
Query: 393 EKGRHYFEIMVKEYGIRPIHDHYT--CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATL 450
+G M G+ P + ++D+ + RL A + + +AI W T+
Sbjct: 418 REGAQVHAAMAVR-GVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLE-RRNAIQWTTV 475
Query: 451 LSSCRIHGNVE 461
+ G V+
Sbjct: 476 IVGHAQEGQVK 486
>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
Length = 1009
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 244/692 (35%), Positives = 359/692 (51%), Gaps = 55/692 (7%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
SWN +ISG +G + DA+ +++ ML + + IT +++L + + + LG+ IH
Sbjct: 321 SWNGIISGCVQNGYLEDALDMFSRMLWYP-EDPNIITIASILPACTGLKALRLGKAIHXI 379
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
K G V+V ++DMY+K G A++ F + KN M+N MI + G VE++
Sbjct: 380 AXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDA 439
Query: 128 RRLFRGMKD----KDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG----- 178
L R M+ D I++ T+++G +NGL+ +A +L EM GL + +F
Sbjct: 440 LGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMGLKPNVVSFNVLISG 499
Query: 179 ------------------------------------------SVLTACGGLLALEEGKQI 196
L AC L +GK+I
Sbjct: 500 FQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACADLNLWCQGKEI 559
Query: 197 HAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCS 256
H + +RN + N+FV SALVDMY KC + A VF + +N VSW A++ GY N
Sbjct: 560 HGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYINNKQP 619
Query: 257 EEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFI-TVSNA 315
EEA+K+F M G++P T + +C ++A++ G HG + L + +A
Sbjct: 620 EEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAIXSA 679
Query: 316 LVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPD 375
L+ Y KCG+I D+ +F+ +D W A++S ++ G A +F +M G+ PD
Sbjct: 680 LIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFXQMELLGIXPD 739
Query: 376 EVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFI 435
+T + +LSAC+R GLVE+G YF M YG+ +HYTCM+ IL AG L+EA FI
Sbjct: 740 HITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYTCMVGILGGAGLLDEALDFI 799
Query: 436 NKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWD 495
+MP+PPDA WATLL +CR+H N EIG+ AA++L EL+P N +Y+LLS+IY S G WD
Sbjct: 800 RQMPYPPDACMWATLLQACRVHSNPEIGERAAKALFELEPDNATNYMLLSNIYVSSGMWD 859
Query: 496 HVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEG 555
LR MR + + CS++ S F + S P ++I + L RKM G
Sbjct: 860 FAKNLRSFMRGRKLLTIKECSYLTVGSHXCTFKGGESSHPELEEILETWDXLARKMELSG 919
Query: 556 YVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATK 615
Y P + V D E E H+EKLAI FG++ P+ V KN+R+C DCH + K
Sbjct: 920 YFP-LDPVFDDEE-KELDPFSCLHTEKLAICFGIISSNXYRPVHVSKNIRMCIDCHTSAK 977
Query: 616 YISKITQREILVRDAVRFHLFKNGECSCGDFW 647
ISKI REI V+D +H K+G C C D W
Sbjct: 978 LISKIDGREIFVKDVCFYHHMKDGICXCQDRW 1009
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 205/467 (43%), Gaps = 72/467 (15%)
Query: 28 VYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMY 87
VY ML D + T+L S+ +G+ +HG +++ S VFVG+ L+ Y
Sbjct: 175 VYEGMLPD------KYLVPTILKACSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFY 228
Query: 88 AKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMK----DKDSISWT 143
+ G + ++ F + E+++V + +I+ + GL +E++ +F M+ D ISW+
Sbjct: 229 SNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWS 288
Query: 144 TMITGLMQNGLEREAIDLFREMRLEGL----------------------AMDQF------ 175
+++G +NG A++ EM GL A+D F
Sbjct: 289 ALLSGFARNGEIDLALETLEEMPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWY 348
Query: 176 -------TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYA 228
T S+L AC GL AL GK IH ++ NV+V +++DMY KC S YA
Sbjct: 349 PEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYA 408
Query: 229 ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL 288
E VF KN W M+ Y G E+A+ + +MQ++G +PD T +++S A
Sbjct: 409 EKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARN 468
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
+ + + GL + N L++ + + G ++ ++F M +
Sbjct: 469 GLKTQAXELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGC----- 523
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
NE ++L ++P+ +T+ G L AC+ L +G+ ++ G
Sbjct: 524 -------NPNEVLNL-------SMRPNPITITGALPACADLNLWCQGKEIHGYTLRN-GF 568
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPD---AIGWATLLS 452
P + ++D+ ++ ++ A NK+ F D + W L++
Sbjct: 569 EPNIFVSSALVDMYAKCHDMDSA----NKVFFRIDGRNTVSWNALMA 611
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 124/507 (24%), Positives = 200/507 (39%), Gaps = 110/507 (21%)
Query: 13 ISGHASHGSVNDAVKVYNLM--LKDGLGNLSRITFSTMLIMSSSRRCVDLG--RQIHGHI 68
I G + +V++ + L+ D L N S S + S RC L RQIH +
Sbjct: 49 IIGFKHYSTVSNHIHPQTLLPSFVDTLTNSSPTEISDSI--SLLNRCSTLSEFRQIHARV 106
Query: 69 LKFGFGSY-VFVGSPLVDMYAKLGL-IYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+K + +G+ LV +Y K + DA++ DE+P + + Y +I R
Sbjct: 107 VKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEIPNRTVPAYAALIRSYCR------ 160
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
S W E FR M EG+ D++ ++L AC
Sbjct: 161 ------------SEQWD-------------ELFSXFRLMVYEGMLPDKYLVPTILKACSA 195
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+L GK +H F+IR + +VFVG+AL+ Y C + + SVF +M ++VVSWTA+
Sbjct: 196 MLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTAL 255
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPD-----------------DFTLGS--------- 280
+ Y + G +EA IF MQ +G++PD D L +
Sbjct: 256 ISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMPERGL 315
Query: 281 ---------VISSCANLASLEEGTQFHGRSL-----------------VTGL-------- 306
+IS C LE+ R L TGL
Sbjct: 316 QPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKA 375
Query: 307 ----------ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
+ + V +++ Y KCG+ + + ++F + ++ W +++ Y GK
Sbjct: 376 IHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGK 435
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
+ + L M G KPD +T +LS +R GL + MV + G++P +
Sbjct: 436 VEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMV-QMGLKPNVVSFN 494
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPD 443
+I ++G EA M P D
Sbjct: 495 VLISGFQQSGLSYEALKVFRIMQSPSD 521
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 166/360 (46%), Gaps = 49/360 (13%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLG-------NLSRITFSTMLIMSSSRRCVD 59
VS+N+LISG G +A+KV+ +M G NLS + + + I + C D
Sbjct: 491 VSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLS-MRPNPITITGALPACAD 549
Query: 60 L-----GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTM 114
L G++IHG+ L+ GF +FV S LVDMYAK + A + F + +N V +N +
Sbjct: 550 LNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNAL 609
Query: 115 ITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
+ G + N EA+ LF EM EGL
Sbjct: 610 MAGYI-------------------------------NNKQPEEALKLFLEMLGEGLQPSS 638
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRN--DHKDNVFVGSALVDMYCKCKSIKYAESVF 232
TF + ACG + A+ G+ +H + + D N + SAL+DMY KC SI A+SVF
Sbjct: 639 ITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNA-IXSALIDMYAKCGSILDAKSVF 697
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
+ K+V W AM+ + +G + A +F M+ GI PD T S++S+CA +E
Sbjct: 698 DSEVEKDVPLWNAMISAFSVHGMARNAFAVFXQMELLGIXPDHITFVSLLSACARDGLVE 757
Query: 293 EGTQ-FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALVSG 350
EG + F+ + G+ + + +V G G ++++ +M D W L+
Sbjct: 758 EGWKYFNSMEISYGVAATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQA 817
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 175/371 (47%), Gaps = 41/371 (11%)
Query: 179 SVLTACGGLLALEEGKQIHAFIIR-NDHKDNVFVGSALVDMYCKCK-SIKYAESVFRTMA 236
S+L C L E +QIHA +++ N K +G+ LV +YCK + S++ A + +
Sbjct: 88 SLLNRCS---TLSEFRQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEIP 144
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
+ V ++ A++ Y ++ +E F M G+ PD + + +++ +C+ + G
Sbjct: 145 NRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGKM 204
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
HG + + S + V NAL+ FY CG++ S +F+ M RD VSWTAL+S Y + G
Sbjct: 205 VHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGL 264
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
+E +F M G+KPD ++ +LS +R G ++ E M E G++P + +
Sbjct: 265 XDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEM-PERGLQPTVNSWN 323
Query: 417 CMIDILSRAGRLEEAKSFINKM---PFPPDAIGWATLLSSCR------------------ 455
+I + G LE+A ++M P P+ I A++L +C
Sbjct: 324 GIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXIAXKH 383
Query: 456 -IHGNVEIG-------------KWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLR 501
I GNV + +A + + + N A + + + Y ++GK + L
Sbjct: 384 GIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLL 443
Query: 502 RTMREKGVRKD 512
R+M++ G + D
Sbjct: 444 RSMQKDGWKPD 454
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/610 (36%), Positives = 355/610 (58%), Gaps = 34/610 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL-----G 61
VSW LI+G +G +A+ V+ M+ +G + +++ I S+ C +L G
Sbjct: 328 VSWTALIAGSEQNGYDFEALSVFRKMVLEG------VKPNSITIASAVSACTNLSLLRHG 381
Query: 62 RQIHGHILKFG-FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
R+IHG+ +K S + VG+ LVD YAK + A+R F + + ++V +N M+ G
Sbjct: 382 REIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYAL 441
Query: 121 RGLVEESRRLFRGMK----DKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
RG EE+ L MK + D I+W ++TG Q G + A++ F+ M G+ + T
Sbjct: 442 RGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTT 501
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
L ACG + L+ GK+IH +++RN + + VGSAL+ MY C S++ A SVF ++
Sbjct: 502 ISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELS 561
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
++VV W +++ Q+G S A+ + M + +E + T+ S + +C+ LA+L +G +
Sbjct: 562 TRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKE 621
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H + GL + + N+L+ YG+CG+I+ S R+F+ M RD VSW ++S Y G
Sbjct: 622 IHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGF 681
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
+ ++LF+ + GLKP+ +T +LSACS +GL+E+G YF++M EY + P + Y
Sbjct: 682 GMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYA 741
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY 476
CM+D+LSRAG+ E FI KMPF P+A W +LL +CRIH N ++ ++AA L EL+P
Sbjct: 742 CMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQ 801
Query: 477 NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPY 536
+ +YVL+++IY++ G+W+ +++R M+E+GV K PGCSWI+ K ++H F D S P
Sbjct: 802 SSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPL 861
Query: 537 SDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGL 596
+QI + KL DV+ EK L HSEK+A+AFGL+ G
Sbjct: 862 MEQISGKDGKL------------------DVDEDEKEFSLCGHSEKIALAFGLISTTXGT 903
Query: 597 PIRVVKNLRV 606
P+R++KNLRV
Sbjct: 904 PLRIIKNLRV 913
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 179/396 (45%), Gaps = 63/396 (15%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
SW ++ + G + +K++ LM+ +G+ F + S + +G+ ++ +
Sbjct: 157 SWTAIMEMYCGLGDYEETIKLFYLMVNEGV-RPDHFVFPKVFKACSELKNYRVGKDVYDY 215
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
+L GF V ++DM+ K G + + +
Sbjct: 216 MLSIGFEGNSCVKGSILDMFIKCGRM-------------------------------DIA 244
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
RR F ++ KD W M++G G ++A+ +M+L G+ DQ T+ ++++
Sbjct: 245 RRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQS 304
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
EE + F+ KD F+ NVVSWTA++
Sbjct: 305 GQFEEASKY--FLEMGGLKD------------------------FK----PNVVSWTALI 334
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL-VTGL 306
G QNG EA+ +F M G++P+ T+ S +S+C NL+ L G + HG + V L
Sbjct: 335 AGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEEL 394
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
S + V N+LV +Y KC ++E + R F + D VSW A+++GYA G E I+L +
Sbjct: 395 DSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSE 454
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
M G++PD +T G+++ ++ G + +F+ M
Sbjct: 455 MKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRM 490
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 190/443 (42%), Gaps = 98/443 (22%)
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
LG Q+H ++ G F+GS L+++Y +
Sbjct: 107 LGFQVHAQLVVNGVDVCEFLGSRLLEVYCQ------------------------------ 136
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
G VE++RR+F M +++ SWT ++ G E I LF M EG+ D F F
Sbjct: 137 -TGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPK 195
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
V AC L GK ++ +++ + N V +++DM+ KC + A F + +K+
Sbjct: 196 VFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKD 255
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
V W M+ GY G ++A+K +M+ +G++PD T ++IS A EE ++
Sbjct: 256 VFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASK--- 312
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
++ + G ++D + NV VSWTAL++G + G E
Sbjct: 313 -------------------YFLEMGGLKDF-----KPNV---VSWTALIAGSEQNGYDFE 345
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH---------------------- 397
+ +F KM+ G+KP+ +T+ +SAC+ L+ GR
Sbjct: 346 ALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLV 405
Query: 398 -YF------EIMVKEYGIRPIHD--HYTCMIDILSRAGRLEEAKSFINKMPFP---PDAI 445
Y+ E+ +++G+ D + M+ + G EEA +++M F PD I
Sbjct: 406 DYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDII 465
Query: 446 GWATLLSSCRIHGNVEIGKWAAE 468
W L++ +G+ GK A E
Sbjct: 466 TWNGLVTGFTQYGD---GKAALE 485
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 145/307 (47%), Gaps = 3/307 (0%)
Query: 151 QNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVF 210
+NG+ A L M L + S+L C L L G Q+HA ++ N F
Sbjct: 66 RNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEF 125
Query: 211 VGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
+GS L+++YC+ ++ A +F M+ +NV SWTA++ Y G EE +K+F M G
Sbjct: 126 LGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEG 185
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
+ PD F V +C+ L + G + L G V +++ + KCG ++ +
Sbjct: 186 VRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIAR 245
Query: 331 RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
R F E+ +D W +VSGY G+ + + M G+KPD+VT ++S +++G
Sbjct: 246 RFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSG 305
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF---PPDAIGW 447
E+ YF M +P +T +I + G EA S KM P++I
Sbjct: 306 QFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITI 365
Query: 448 ATLLSSC 454
A+ +S+C
Sbjct: 366 ASAVSAC 372
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 200/535 (37%), Positives = 323/535 (60%), Gaps = 1/535 (0%)
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
+I+ + G + +RRLF + + DS + +++ + G + + +R M G
Sbjct: 129 LISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQS 188
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
+TF SV+ AC L AL GK+IH+ ++ + +++V +AL+ +Y K +K A+ VF
Sbjct: 189 NYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFD 248
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE 293
M + +++W +++ GY QNG +E++ +F M +G +PD T+ S++SSC+ L +L+
Sbjct: 249 AMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDF 308
Query: 294 GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK 353
G H + G + + +L+ Y +CGN+ + +F+ M R+ V+WTA++SGY
Sbjct: 309 GCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGM 368
Query: 354 FGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
G + ++LF +M ++G +P+ +T + VLSAC+ +GL++ GR F M + YG+ P +
Sbjct: 369 HGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVE 428
Query: 414 HYTCMIDILSRAGRLEEAKSFINK-MPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLE 472
H CM+D+ RAG L +A FI K +P P W ++L +CR+H N ++G AE +L
Sbjct: 429 HNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLS 488
Query: 473 LDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDW 532
++P NP YV+LS+IYA G+ D V +R M + ++K G S I+ + ++FS D
Sbjct: 489 VEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDK 548
Query: 533 SSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFI 592
S P ++ IY L++L + + GYVP S++HD+E E+ L +HSEKLA+AFGLL
Sbjct: 549 SHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKT 608
Query: 593 PPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G IR+VKNLR+C DCH+A K+IS I REI+VRD RFH FK+G CSC D+W
Sbjct: 609 NQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCLDYW 663
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 188/375 (50%), Gaps = 39/375 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D ++ L+ + G D V Y ML G S TF++++ + + L
Sbjct: 149 VPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQ-SNYTFTSVIKACADLSALRL 207
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G++IH H++ G+GS ++V + L+ +YAK + AK+ FD +P++ I+ +N++I+G +
Sbjct: 208 GKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQ 267
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL +ES I LF M G D T S+
Sbjct: 268 NGLPQES-------------------------------IGLFHLMMESGFQPDSATIVSL 296
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L++C L AL+ G +H + N NV +G++L++MY +C ++ A VF +M +NV
Sbjct: 297 LSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNV 356
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
V+WTAM+ GYG +G +A+++F M+ G P++ T +V+S+CA+ +++G + F
Sbjct: 357 VTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSS 416
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD--EVSWTALVSGYAKFGKA 357
GL+ + + +V +G+ G + D+++ + ++ WT+++ +
Sbjct: 417 MKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGA----CRM 472
Query: 358 NETIDLFEKMLSHGL 372
+ DL K+ H L
Sbjct: 473 HRNFDLGVKVAEHVL 487
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 83/207 (40%), Gaps = 41/207 (19%)
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
Q H +V+GL ++ L++ G+I + RLF + D + +L+ +KFG
Sbjct: 109 QVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFG 168
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH-YFEIMVKEYGIRPIHDH 414
+ +T+ + +ML G T V+ AC+ + G+ + +MV YG D
Sbjct: 169 FSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYG----SDM 224
Query: 415 Y--TCMIDILSRAGRLEEAKSFINKMP--------------------------------- 439
Y +I + ++A ++ AK + MP
Sbjct: 225 YVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMES 284
Query: 440 -FPPDAIGWATLLSSCRIHGNVEIGKW 465
F PD+ +LLSSC G ++ G W
Sbjct: 285 GFQPDSATIVSLLSSCSQLGALDFGCW 311
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 233/649 (35%), Positives = 343/649 (52%), Gaps = 70/649 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + + N++I + ++G + VKV+ M + TF +L S + +
Sbjct: 100 IPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNV-RPDHYTFPCVLKACSCSGTIVI 158
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR+IHG K G S +FVG+ LV MY K G + +A+ DE+
Sbjct: 159 GRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEM----------------- 201
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SRR D +SW +++ G QN +A+++ REM ++ D T S+
Sbjct: 202 ------SRR--------DVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASL 247
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A + N +NV Y + +F M K++
Sbjct: 248 LPA-----------------VSNTTTENVM----------------YVKDMFFKMGKKSL 274
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW M+ Y +N EAV+++ M+ +G EPD ++ SV+ +C + ++L G + HG
Sbjct: 275 VSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGY 334
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
LI + + NAL+ Y KCG +E + +F M RD VSWTA++S Y G+ +
Sbjct: 335 IERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDA 394
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LF K+ GL PD + + L+ACS AGL+E+GR F++M Y I P +H CM+D
Sbjct: 395 VALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVD 454
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG+++EA FI M P+ W LL +CR+H + +IG AA+ L +L P
Sbjct: 455 LLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGY 514
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS+IYA G+W+ V+ +R M+ KG++K+PG S ++ +H F D S P SD+I
Sbjct: 515 YVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEI 574
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIP-----PG 595
Y EL+ L +KM + GYVPD S LHDVE +K L HSEKLAI F L+
Sbjct: 575 YRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSN 634
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCG 644
IR+ KNLR+C DCH A K IS+IT REI++RD RFH+F+ G CSC
Sbjct: 635 NTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCA 683
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 152/326 (46%), Gaps = 26/326 (7%)
Query: 167 LEGLAMDQ-------FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMY 219
L L +DQ F G VL + L + +H+ II D + N +G L+ Y
Sbjct: 28 LPKLELDQKSPQETVFLLGQVLDTYPDIRTL---RTVHSRIILEDLRCNSSLGVKLMRAY 84
Query: 220 CKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLG 279
K + A VF + +NV+ M+ Y NG E VK+F M + PD +T
Sbjct: 85 ASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFP 144
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
V+ +C+ ++ G + HG + GL S + V N LV+ YGKCG + ++ + +EM+ R
Sbjct: 145 CVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR 204
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
D VSW +LV GYA+ + ++ +++ +M S + D T+ +L A S + Y
Sbjct: 205 DVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TTENVMYV 262
Query: 400 EIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP---FPPDAIGWATLLSSC-- 454
+ M + G + + + MI + + EA ++M F PDA+ ++L +C
Sbjct: 263 KDMFFKMGKKSLVS-WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGD 321
Query: 455 --------RIHGNVEIGKWAAESLLE 472
+IHG +E K LLE
Sbjct: 322 TSALSLGKKIHGYIERKKLIPNLLLE 347
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/585 (37%), Positives = 324/585 (55%), Gaps = 64/585 (10%)
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM-DQFTFGSVLTACG 185
+RRLF +++ D + T+I GL + A+ LF EMR + +A+ D F+F +L A
Sbjct: 58 ARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAA 117
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYC------------------------- 220
AL G Q+H + ++FVG+ L+ MY
Sbjct: 118 NCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNA 177
Query: 221 ------KCKSIKYAESVFRTMAWKNV-------------------------------VSW 243
+C+ +K AE VFR M +N+ VSW
Sbjct: 178 IVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSW 237
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
+ M+VG+ NG +A F ++R G+ P++ +L V+S+CA + E G HG
Sbjct: 238 STMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEK 297
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
+G + I+V+NAL+ Y KCGN++ + +F+ M R VSWTA+++G A G E I L
Sbjct: 298 SGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRL 357
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
F +M +KPD +T I +L ACS AGLV+ G YF MV YGI P+ +HY CM+D+
Sbjct: 358 FNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYG 417
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
RAG+L++A F+ +MP P+ I W TLL +C IHGN+ + L ELDP N +VL
Sbjct: 418 RAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVL 477
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
LS+IYA GKW V+ LRR+M + ++K PG S I+ ++ F A + + + + + +
Sbjct: 478 LSNIYAVAGKWKDVAALRRSMTHQRLKKTPGWSMIEVNRIIYSFVAGEKQNDIAVEAHQK 537
Query: 544 L-EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVK 602
L E ++R I+ GYVP++ SVLHD+E+ EK ++ HSEKLA+AFG+ +P G IRVVK
Sbjct: 538 LREIMSRLRIEGGYVPEVGSVLHDIEVEEKEDSVSQHSEKLAVAFGMAKLPRGRAIRVVK 597
Query: 603 NLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
NLR+C DCH K ISK+ + EI+VRD RFH F +G CSC D+W
Sbjct: 598 NLRICRDCHTVMKLISKVYEVEIVVRDRSRFHSFTHGSCSCRDYW 642
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 195/384 (50%), Gaps = 33/384 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +N LI G + + ++A++++ M + + +F+ +L +++ R + G Q+
Sbjct: 69 DVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNGLQL 128
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNT----------- 113
H + +G S++FVG+ L+ MYA+ + A++ FDE+ E NIV +N
Sbjct: 129 HCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFRCEGV 188
Query: 114 --------------------MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNG 153
M+ G + G ++ +R +F M KD +SW+TMI G NG
Sbjct: 189 KDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNG 248
Query: 154 LEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGS 213
+A FRE+R EG+ ++ + VL+AC A E G+ +H F+ ++ + V +
Sbjct: 249 NFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVNN 308
Query: 214 ALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEP 273
AL+D Y KC ++ A VF M ++ VSWTAM+ G +G EEA+++F M+ + I+P
Sbjct: 309 ALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKP 368
Query: 274 DDFTLGSVISSCANLASLEEGTQFHGRSLVT-GLISFITVSNALVTFYGKCGNIEDSHRL 332
D T S++ +C++ ++ G + R + T G+ I +V YG+ G ++ ++
Sbjct: 369 DSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAYDF 428
Query: 333 FNEMNVR-DEVSWTALVSGYAKFG 355
+M + +++ W L+ + G
Sbjct: 429 VCQMPISPNDIVWRTLLGACSIHG 452
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 154/371 (41%), Gaps = 78/371 (21%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK---SIKYAESVFRTMAWKNVVSWTA 245
+L KQI A I + V L+ ++C S+ YA +F + +V +
Sbjct: 17 SLRTVKQIQALIFKTCLNSYPLVSGKLL-LHCAVTLPDSLHYARRLFLDIRNPDVFMYNT 75
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIE-PDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++ G + A+++F M+R + PD F+ ++ + AN +L G Q H ++
Sbjct: 76 LIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNGLQLHCLAVGY 135
Query: 305 GLISFITVSNALVTFYGKCG-------------------------------NIEDSHRLF 333
GL S + V L++ Y +C ++D+ ++F
Sbjct: 136 GLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFRCEGVKDAEQVF 195
Query: 334 NEMNVRDEVSWTALVSGYAKFGKA-------------------------------NETID 362
M +R+ SW +++GY K G+ N+
Sbjct: 196 RCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFA 255
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR--HYFEIMVKEYGIRPIHDHYTCMID 420
F ++ G++P+EV+L GVLSAC++AG E GR H F V++ G I +ID
Sbjct: 256 FFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGF---VEKSGFLQIISVNNALID 312
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN--P 478
S+ G L+ A+ + M A+ W +++ +HG G+ A E++ N P
Sbjct: 313 TYSKCGNLDMARLVFDNM-LRRSAVSWTAMIAGMAMHG---YGEEAIRLFNEMEESNIKP 368
Query: 479 ASYVLLSSIYA 489
S +S +YA
Sbjct: 369 DSITFISILYA 379
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 5/169 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSW+ +I G A +G+ NDA + + ++G+ + ++ + +L + +
Sbjct: 229 MPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGM-RPNEVSLTGVLSACAQAGAFEF 287
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +HG + K GF + V + L+D Y+K G + A+ FD + ++ V + MI G+
Sbjct: 288 GRILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAM 347
Query: 121 RGLVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREM 165
G EE+ RLF M++ DSI++ +++ GL F M
Sbjct: 348 HGYGEEAIRLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRM 396
>gi|414879360|tpg|DAA56491.1| TPA: hypothetical protein ZEAMMB73_164599 [Zea mays]
Length = 520
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/511 (39%), Positives = 309/511 (60%), Gaps = 3/511 (0%)
Query: 140 ISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAF 199
+++ I+ + GL A+ LFREMR GL D++T +L + L E
Sbjct: 10 VAYNAAISRCARAGLYARALALFREMRGRGLRADEYTLPPLLNSAAQLRGPPEAVAALHA 69
Query: 200 IIRNDHK-DNVFVGSALVDMYCKCK--SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCS 256
++ ++ V +ALVD Y + A +VF M ++VV+WT++L G + G
Sbjct: 70 LLLRAGLAPHLHVANALVDAYARLPHAGAAAARAVFDEMPRRDVVTWTSLLTGLARAGAH 129
Query: 257 EEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNAL 316
AV+ + M +G++PD+F + + +SSCA +L+ G H ++ GL F +V N+L
Sbjct: 130 GAAVRAYHGMVASGVQPDEFAVPAALSSCAASTALDLGRSVHAAAVRLGLRPFRSVENSL 189
Query: 317 VTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDE 376
V+ Y K G + D+ +F+ M R ++WTAL+ GYA+ G+ ++++++ M+ G +PD
Sbjct: 190 VSMYAKTGALRDARAVFDAMPARCTITWTALIVGYAQNGRGRQSLEVYADMVRSGCRPDY 249
Query: 377 VTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFIN 436
VT IG+L ACS AGLV+ GR +F MV YGI P DHY CM+D+L RAGRL+EA +N
Sbjct: 250 VTFIGLLFACSHAGLVDAGRAHFRSMVPVYGIAPGPDHYACMVDLLGRAGRLDEAMDLLN 309
Query: 437 KMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDH 496
+ DA W +LL +CR+H N E+ + AAE + LDP + YV+LS++Y+ +W
Sbjct: 310 RSSTELDATVWKSLLGACRVHQNAELAERAAEMVWRLDPADAVPYVMLSNLYSRARRWGD 369
Query: 497 VSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGY 556
V+++R M+ +GV K+PGCSW+ H+F +D P + +IY ++E++ ++ EGY
Sbjct: 370 VARIRALMKARGVTKEPGCSWVGVNGITHLFHVEDRDHPRAAEIYRKVEEMTERIRVEGY 429
Query: 557 VPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKY 616
VPD L D + + L +HSE+LA+AFGLL +P PIRV KNLRVC DCH A K
Sbjct: 430 VPDTDWALQDEVPEWRQRGLAYHSERLAVAFGLLAVPAAAPIRVFKNLRVCGDCHTAIKM 489
Query: 617 ISKITQREILVRDAVRFHLFKNGECSCGDFW 647
++K+ REI++RDA FH K+GECSCGD+W
Sbjct: 490 VAKVYGREIILRDANCFHHMKDGECSCGDYW 520
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 136/263 (51%), Gaps = 5/263 (1%)
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
+F M +D ++WT+++TGL + G A+ + M G+ D+F + L++C A
Sbjct: 104 VFDEMPRRDVVTWTSLLTGLARAGAHGAAVRAYHGMVASGVQPDEFAVPAALSSCAASTA 163
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
L+ G+ +HA +R + V ++LV MY K +++ A +VF M + ++WTA++VG
Sbjct: 164 LDLGRSVHAAAVRLGLRPFRSVENSLVSMYAKTGALRDARAVFDAMPARCTITWTALIVG 223
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT--GLI 307
Y QNG ++++++ +M R+G PD T ++ +C++ A L + + H RS+V G+
Sbjct: 224 YAQNGRGRQSLEVYADMVRSGCRPDYVTFIGLLFACSH-AGLVDAGRAHFRSMVPVYGIA 282
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKANETIDLFEK 366
+V G+ G ++++ L N + D W +L+ G + + E + +
Sbjct: 283 PGPDHYACMVDLLGRAGRLDEAMDLLNRSSTELDATVWKSLL-GACRVHQNAELAERAAE 341
Query: 367 MLSHGLKPDEVTLIGVLSACSRA 389
M+ D V + + + SRA
Sbjct: 342 MVWRLDPADAVPYVMLSNLYSRA 364
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V+W L++G A G+ AV+ Y+ M+ G+ L ++ +DL
Sbjct: 108 MPRRDVVTWTSLLTGLARAGAHGAAVRAYHGMVASGV-QPDEFAVPAALSSCAASTALDL 166
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +H ++ G + V + LV MYAK G + DA+ FD +P + +
Sbjct: 167 GRSVHAAAVRLGLRPFRSVENSLVSMYAKTGALRDARAVFDAMPARCTI----------- 215
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+WT +I G QNG R++++++ +M G D TF +
Sbjct: 216 --------------------TWTALIVGYAQNGRGRQSLEVYADMVRSGCRPDYVTFIGL 255
Query: 181 LTACGGLLALEEGK 194
L AC ++ G+
Sbjct: 256 LFACSHAGLVDAGR 269
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/574 (39%), Positives = 332/574 (57%), Gaps = 42/574 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCV-- 58
+P H+ S+N +I G+A +A+ ++ L+ K GLG L ++ S + R C
Sbjct: 273 LPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLG-LDEVSLS-----GAXRACAVI 326
Query: 59 --DL-GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
DL G Q+HG +K S + V + ++DMY K G + +A F+E
Sbjct: 327 KGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEE------------- 373
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
M +D++SW +I QNG E + + LF M G+ D+F
Sbjct: 374 ------------------MVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEF 415
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
T+GSVL AC G AL G +IH II++ + FVG AL+DMY KC ++ AE + +
Sbjct: 416 TYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRL 475
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
A + VVSW A++ G+ SEEA K F M G++PD+FT +++ +CANL ++E G
Sbjct: 476 AEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGK 535
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
Q H + + L S +S+ LV Y KCGN++D +F + RD V+W A+V GYA+ G
Sbjct: 536 QIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHG 595
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
E + +FE M +KP+ T + VL AC GLVEKG HYF M+ YG+ P +HY
Sbjct: 596 LGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHY 655
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
+C++DI+ R+G++ +A I MPF DA+ W TLLS C+IHGNVE+ + AA S+L+L+P
Sbjct: 656 SCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEP 715
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSP 535
+ A+YVLLS+IYA+ G W+ V++LR+ MR G++K+PGCSWI+ KS VH F D + P
Sbjct: 716 EDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHP 775
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVEL 569
S +IY L+ L +M GY+PD +L+D EL
Sbjct: 776 RSKEIYENLDVLTDEMKWVGYMPDTDFILNDDEL 809
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 154/533 (28%), Positives = 261/533 (48%), Gaps = 54/533 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLS--------------RITFS 46
MP D VSWN ++ G+A G + A K+++ M G G + R TF+
Sbjct: 103 MPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFA 162
Query: 47 TMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRG----FDE 102
+L SS G QIHG +K GF V GS L+DMYAK + D RG F E
Sbjct: 163 VVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKE 222
Query: 103 LPEKNI-----------------VMYNTMITGLLRR--GLVEESRRLFRGMKDKDSISWT 143
+ + + V+ T + + L + S +LF + + + S+
Sbjct: 223 MQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYN 282
Query: 144 TMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRN 203
+I G ++ EA+ +FR ++ GL +D+ + AC + EG Q+H +++
Sbjct: 283 AIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKS 342
Query: 204 DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIF 263
+ N+ V +A++DMY KC ++ A VF M ++ VSW A++ + QNG E+ + +F
Sbjct: 343 LCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLF 402
Query: 264 CNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT--GLISFITVSNALVTFYG 321
M ++G+EPD+FT GSV+ +CA +L G + H R + + GL SF+ + AL+ Y
Sbjct: 403 VWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGI--ALIDMYS 460
Query: 322 KCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIG 381
KCG +E + +L + + + VSW A++SG++ ++ E F KML G+ PD T
Sbjct: 461 KCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYAT 520
Query: 382 VLSACSRAGLVEKGRH-YFEIMVKEYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKM 438
+L C+ VE G+ + +I+ KE D Y + ++D+ S+ G +++ + K
Sbjct: 521 ILDTCANLVTVELGKQIHAQIIKKELQ----SDAYISSTLVDMYSKCGNMQDFQLIFEKA 576
Query: 439 PFPPDAIGWATLLSSCRIHGNVEIGKWAAE--SLLELDPYNPASYVLLSSIYA 489
P D + W ++ HG +G+ A + ++L+ P L+ + A
Sbjct: 577 P-NRDFVTWNAMVCGYAQHG---LGEEALKIFEYMQLENVKPNHATFLAVLRA 625
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 132/508 (25%), Positives = 240/508 (47%), Gaps = 50/508 (9%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
TFS + S R+ + G+Q H ++ F VFV + L+ MY K + A + FD +
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGM 103
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDS--ISWTTMITGLMQNGLEREAIDL 161
P+++ V +N M+ G RG + +++LF M + G M +R +
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAV 163
Query: 162 FRE-----------MRLEGLAM------DQFTFGSVL---TAC--------GGLLALEEG 193
+ +++ GLA+ D T ++L C GGL +E
Sbjct: 164 VLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEM 223
Query: 194 K-------QIHAFIIRNDHKDNVFVGSALVDMYCKCKSIK-YAESVFRTMAWKNVVSWTA 245
+ Q+H ++ D +V +G+A +DMY KC ++ + +F ++ N+ S+ A
Sbjct: 224 QKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNA 283
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
++VGY ++ EA+ +F +Q++G+ D+ +L +CA + EG Q HG S+ +
Sbjct: 284 IIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSL 343
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
S I V+NA++ YGKCG + ++ +F EM RD VSW A+++ + + G +T+ LF
Sbjct: 344 CQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFV 403
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT--CMIDILS 423
ML G++PDE T VL AC+ + G ++K R D + +ID+ S
Sbjct: 404 WMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKS---RMGLDSFVGIALIDMYS 460
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL--DPYNPASY 481
+ G +E+A+ +++ + W ++S + E + +LE+ DP N
Sbjct: 461 KCGMMEKAEKLHDRLA-EQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYA 519
Query: 482 VLLSS----IYASKGKWDHVSQLRRTMR 505
+L + + GK H +++ ++
Sbjct: 520 TILDTCANLVTVELGKQIHAQIIKKELQ 547
>gi|302800080|ref|XP_002981798.1| hypothetical protein SELMODRAFT_115031 [Selaginella moellendorffii]
gi|300150630|gb|EFJ17280.1| hypothetical protein SELMODRAFT_115031 [Selaginella moellendorffii]
Length = 483
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/483 (42%), Positives = 305/483 (63%)
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M LEGL D+ TF SV+ AC L L G+ +H +I + + +G+ L++MY +C
Sbjct: 1 MELEGLRGDRSTFTSVIEACACLPDLTLGQLLHYRMITLGCELDTVLGTNLINMYSRCDV 60
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
A VF M K+VV WTAM+ + Q G EA+++F M G+ D V+
Sbjct: 61 PDKAIEVFDAMHNKSVVVWTAMIAAHSQQGQGLEALELFKRMDIEGVRADKVAFSLVLDV 120
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
CANLA+L + H T L + V N LV YGKCG + ++ ++F +M +D VSW
Sbjct: 121 CANLAALAQARILHATVAGTELEQDMVVKNTLVNMYGKCGKLNEARQVFEKMASKDMVSW 180
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
T++++ YA+ G A+ +LF M G D V + V+S C+ AGL++ R++F M++
Sbjct: 181 TSIIAAYAQQGSASAAFELFHAMQQAGEAIDTVIFVKVMSGCNHAGLLKDARNWFVSMLQ 240
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
+YG+ P++++Y C++D+L R G+L++ + + M PD I W + L++C++H +++ G
Sbjct: 241 DYGLSPVNENYACILDLLGRLGQLQDVEDLLENMTLEPDFIAWMSFLNACKVHKDMKRGV 300
Query: 465 WAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRV 524
AA+ L++L+ N ASYVLLS I+A GK+D ++LRR + +K PG SWI+ K +V
Sbjct: 301 RAAQRLVQLNRRNSASYVLLSDIHAVCGKFDAAAKLRRRIGRDCGKKVPGLSWIEIKDKV 360
Query: 525 HIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLA 584
H F++ + P +D+I+AEL++L M + GYVPD VL DVE EK ++L +HSEK A
Sbjct: 361 HKFASGSRTHPRNDEIFAELQRLGVLMREAGYVPDTEVVLMDVEEEEKEQVLCYHSEKQA 420
Query: 585 IAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCG 644
+AFGL+ P G P+RVVKNLRVC+DCH ATK+ISKIT R+I VRDA RFH FK+G CSC
Sbjct: 421 MAFGLISTPSGTPLRVVKNLRVCTDCHTATKFISKITGRQITVRDANRFHEFKDGFCSCK 480
Query: 645 DFW 647
D+W
Sbjct: 481 DYW 483
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 147/311 (47%), Gaps = 33/311 (10%)
Query: 42 RITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFD 101
R TF++++ + + LG+ +H ++ G +G+ L++MY++
Sbjct: 10 RSTFTSVIEACACLPDLTLGQLLHYRMITLGCELDTVLGTNLINMYSRC----------- 58
Query: 102 ELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDL 161
++P+K I +F M +K + WT MI Q G EA++L
Sbjct: 59 DVPDKAI--------------------EVFDAMHNKSVVVWTAMIAAHSQQGQGLEALEL 98
Query: 162 FREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK 221
F+ M +EG+ D+ F VL C L AL + + +HA + + + ++ V + LV+MY K
Sbjct: 99 FKRMDIEGVRADKVAFSLVLDVCANLAALAQARILHATVAGTELEQDMVVKNTLVNMYGK 158
Query: 222 CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
C + A VF MA K++VSWT+++ Y Q G + A ++F MQ+ G D V
Sbjct: 159 CGKLNEARQVFEKMASKDMVSWTSIIAAYAQQGSASAAFELFHAMQQAGEAIDTVIFVKV 218
Query: 282 ISSCANLASLEEGTQFHGRSLVTGLISFITVSNA-LVTFYGKCGNIEDSHRLFNEMNVR- 339
+S C + L++ + L +S + + A ++ G+ G ++D L M +
Sbjct: 219 MSGCNHAGLLKDARNWFVSMLQDYGLSPVNENYACILDLLGRLGQLQDVEDLLENMTLEP 278
Query: 340 DEVSWTALVSG 350
D ++W + ++
Sbjct: 279 DFIAWMSFLNA 289
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/550 (38%), Positives = 321/550 (58%), Gaps = 32/550 (5%)
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
+F G D+ W MI G + ++ L++ M + +TF S+L AC L A
Sbjct: 71 VFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSA 130
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE-------------------- 229
EE QIHA I + ++++V+ ++L++ Y + K A
Sbjct: 131 FEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKG 190
Query: 230 -----------SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
++FR MA KN +SWT M+ GY Q ++EA+++F MQ + +EPD+ +L
Sbjct: 191 YVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSL 250
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
+ +S+CA L +LE+G H T + + L+ Y KCG +E++ +F +
Sbjct: 251 ANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK 310
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
+ +WTAL+SGYA G E I F +M G+KP+ +T VL+ACS GLVE+G+
Sbjct: 311 KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLI 370
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
F M ++Y ++P +HY C++D+L RAG L+EAK FI +MP P+A+ W LL +CRIH
Sbjct: 371 FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHK 430
Query: 459 NVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWI 518
N+E+G+ E L+ +DPY+ YV ++I+A KWD ++ RR M+E+GV K PGCS I
Sbjct: 431 NIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 490
Query: 519 KYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHD-VELSEKIKMLN 577
+ H F A D S P ++I ++ + RK+ + GYVP++ +L D V+ E+ +++
Sbjct: 491 SLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVH 550
Query: 578 HHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFK 637
HSEKLAI +GL+ PG IR++KNLRVC DCH TK ISKI +R+I++RD RFH F+
Sbjct: 551 QHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFR 610
Query: 638 NGECSCGDFW 647
+G+CSCGD+W
Sbjct: 611 DGKCSCGDYW 620
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/365 (31%), Positives = 200/365 (54%), Gaps = 7/365 (1%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D WNL+I G + ++ +Y ML + + TF ++L S+ + QI
Sbjct: 79 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPH-NAYTFPSLLKACSNLSAFEETTQI 137
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H I K G+ + V+ + L++ YA G A FD +PE + V +N++I G ++ G +
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKM 197
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+ + LFR M +K++ISWTTMI+G +Q + +EA+ LF EM+ + D + + L+AC
Sbjct: 198 DIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSAC 257
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L ALE+GK IH+++ + + + +G L+DMY KC ++ A VF+ + K+V +WT
Sbjct: 258 AQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWT 317
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHGRSLV 303
A++ GY +G EA+ F MQ+ GI+P+ T +V+++C+ +EEG F+
Sbjct: 318 ALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERD 377
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKANETID 362
L I +V G+ G ++++ R EM ++ + V W AL+ K + ++ I+
Sbjct: 378 YNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALL----KACRIHKNIE 433
Query: 363 LFEKM 367
L E++
Sbjct: 434 LGEEI 438
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 92/246 (37%), Gaps = 18/246 (7%)
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRL-- 332
+ L +S + EE Q H R L TGL+ S A+ F C + S L
Sbjct: 11 EHNLYETMSCLQRCSKQEELKQIHARMLKTGLMQ---DSYAITKFLSFCISSTSSDFLPY 67
Query: 333 ----FNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
F+ + D W ++ G++ + ++ L+++ML + T +L ACS
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
E+ + + G +I+ + G + A +++P PD + W
Sbjct: 128 LSAFEETTQ-IHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIP-EPDDVSWN 185
Query: 449 TLLSSCRIHGNVEIGKW--AAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMRE 506
++ I G V+ GK A ++ N S+ + S Y QL M+
Sbjct: 186 SV-----IKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQN 240
Query: 507 KGVRKD 512
V D
Sbjct: 241 SDVEPD 246
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 231/647 (35%), Positives = 344/647 (53%), Gaps = 68/647 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + + N++I + ++G + ++V+ M + TF +L S + +
Sbjct: 101 IPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHV-KPDHYTFPCVLKACSCSGNIVI 159
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G++IHG K G S +FVG+ LV MY K G + +A+ DE+
Sbjct: 160 GKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEM----------------- 202
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SRR D +SW +++ G QN +A+++ REM ++ D T S+
Sbjct: 203 ------SRR--------DVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASL 248
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A + N +NV Y + +F M K++
Sbjct: 249 LPA-----------------VSNTTTENVM----------------YVKDMFFKMGKKSL 275
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW M+ Y +N EAV+++ M+ +G EPD ++ SV+ +C + ++L G + HG
Sbjct: 276 VSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGY 335
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
LI + + NAL+ Y KCG ++ + +F M RD VSWTA++S Y G+ +
Sbjct: 336 IERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDA 395
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LF KM GL PD + + L+ACS AGL+E+GR F++M Y I P +H CM+D
Sbjct: 396 VALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVD 455
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG+++EA FI +MP P+ W LL +CR+H N +IG AA+ L +L P
Sbjct: 456 LLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGY 515
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS+IYA G+W+ V+ +R M+ KG++K+PG S ++ +H F D S P S +I
Sbjct: 516 YVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEI 575
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIP---PGLP 597
Y EL+ L +KM + GYVPD S LHDVE +K L HSEKLAI F L+
Sbjct: 576 YRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTEEEDSNNA 635
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCG 644
IR+ KNLR+C DCH A K IS+IT REI++RD RFH+F+ G CSC
Sbjct: 636 IRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCA 682
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 175/398 (43%), Gaps = 44/398 (11%)
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
F G VL L L + +H+ II D + N +G L+ Y K + A VF
Sbjct: 44 FMLGQVLDTYPDLKTL---RTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDE 100
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
+ +NV+ M+ Y NG E +++F M ++PD +T V+ +C+ ++ G
Sbjct: 101 IPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIG 160
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
+ HG + GL S + V N LV+ YGKCG + ++ + +EM+ RD VSW +LV+GYA+
Sbjct: 161 KKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQN 220
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
+ ++ +++ +M S + D T+ +L A S + Y + M + G + +
Sbjct: 221 QRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TTENVMYVKDMFFKMGKKSLVS- 277
Query: 415 YTCMIDILSRAGRLEEAKSFINKMP---FPPDAIGWATLLSSC----------RIHGNVE 461
+ MI + + EA + M F PDA+ ++L +C +IHG +E
Sbjct: 278 WNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIE 337
Query: 462 IGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYK 521
K LLE L +YA G D + M+ + V SW
Sbjct: 338 RKKLIPNLLLE---------NALIDMYAKCGCLDRARDVFENMKSRDV-----VSWTA-- 381
Query: 522 SRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPD 559
+ SA +S D + L KM G VPD
Sbjct: 382 ----MISAYGFSGRGCDAV-----ALFSKMQDSGLVPD 410
>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 993
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 229/633 (36%), Positives = 355/633 (56%), Gaps = 32/633 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +SWN +IS + S +A++ +L+ G + +TFS+ L SS +
Sbjct: 307 MSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMN 366
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR IH IL+ + + +G+ L+ MY+K + D +R F+ +P ++V N + G
Sbjct: 367 GRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAA 426
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
V + R+F SW MR G+ + T ++
Sbjct: 427 LEDVANAMRVF---------SW----------------------MRGTGIKPNYITMINL 455
Query: 181 LTACGGLLALEE-GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
C L L G +HA++ + + ++ ++L+ MY C ++ + +F + K+
Sbjct: 456 QGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKS 515
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
V+SW A++ ++G EEA+K+F + Q G + D F L +SS ANLASLEEG Q HG
Sbjct: 516 VISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHG 575
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
S+ GL V NA + YGKCG ++ + + R W L+SGYA++G E
Sbjct: 576 LSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKE 635
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
D F+ M+S G KPD VT + +LSACS AGL++KG Y+ M +G+ P H C++
Sbjct: 636 AEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIV 695
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L R G+ EA+ FI++MP P+ + W +LLSS R H N++IG+ AA++LLELDP++ +
Sbjct: 696 DLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDS 755
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+YVLLS++YA+ +W V +LR M+ + K P CSW+K K+ V F D S ++++
Sbjct: 756 AYVLLSNLYATNARWVDVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEK 815
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY +L+++ K+ + GYV D SS LHD + +K L +HSEKLA+A+GLL +P G IR
Sbjct: 816 IYVKLDEILLKLREVGYVADTSSALHDTDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIR 875
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVR 632
+ KNLRVC+DCH K +S + REI++RD R
Sbjct: 876 IFKNLRVCADCHLVFKLVSMVFHREIVLRDPYR 908
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 188/382 (49%), Gaps = 12/382 (3%)
Query: 134 MKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC---GGLLAL 190
M + S SW T ++G + GLE A L R MR + + F S++TAC G
Sbjct: 1 MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60
Query: 191 EEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGY 250
G IHA R NV++G+AL+ +Y + A+ +F M +NVVSWTA++V
Sbjct: 61 ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVAL 120
Query: 251 GQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFI 310
NGC EEA+ + M++ G+ + L +V+S C L G Q +V+GL++ +
Sbjct: 121 SSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHV 180
Query: 311 TVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH 370
+V+N+L+T +G ++D+ RLF+ M RD +SW A++S Y+ ++ + M
Sbjct: 181 SVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHG 240
Query: 371 GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEE 430
+KPD TL ++S C+ + LV G + V G+ ++++ S AG+L+E
Sbjct: 241 EVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSS-GLHCSVPLINALVNMYSTAGKLDE 299
Query: 431 AKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYAS 490
A+S M D I W T++SS + LL+ D P S S++ A
Sbjct: 300 AESLFRNMS-RRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGAC 358
Query: 491 -------KGKWDHVSQLRRTMR 505
G+ H L+R+++
Sbjct: 359 SSPEALMNGRTIHAMILQRSLQ 380
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/464 (25%), Positives = 210/464 (45%), Gaps = 38/464 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW ++ +S+G + +A+ Y M K+G+ + +T++ + +
Sbjct: 105 MPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGV-MCNANALATVVSLCGALEDEVA 163
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+ H++ G ++V V + L+ M+ G LR
Sbjct: 164 GLQVTAHVVVSGLLTHVSVANSLITMF-----------------------------GNLR 194
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
R V+++ RLF M+++D ISW MI+ + + + +MR + D T S+
Sbjct: 195 R--VQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSL 252
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
++ C + G IH+ + + +V + +ALV+MY + AES+FR M+ ++V
Sbjct: 253 VSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDV 312
Query: 241 VSWTAMLVGYGQ-NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+SW M+ Y Q N C E + +Q + P+ T S + +C++ +L G H
Sbjct: 313 ISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHA 372
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
L L + + + N+L+T Y KC ++ED+ R+F M D VS L GYA
Sbjct: 373 MILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVAN 432
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--TC 417
+ +F M G+KP+ +T+I + C G + V + G+ + D Y
Sbjct: 433 AMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGL--LSDEYITNS 490
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
+I + + G LE + +++ I W ++++ HG E
Sbjct: 491 LITMYATCGDLESSTGIFSRIN-NKSVISWNAIIAANVRHGRGE 533
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 196/443 (44%), Gaps = 37/443 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSR---RC 57
MP SW +SG A G + A + +M + + LS ++++ R
Sbjct: 1 MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVP-LSGFALASLVTACEHRGWQEG 59
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
G IH + G V++G+ L+ +Y
Sbjct: 60 AACGAAIHALTHRAGLMGNVYIGTALLHLYGS---------------------------- 91
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
RGLV ++RLF M ++ +SWT ++ L NG EA+ +R MR EG+ +
Sbjct: 92 ---RGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNANAL 148
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
+V++ CG L G Q+ A ++ + +V V ++L+ M+ + ++ AE +F M
Sbjct: 149 ATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEE 208
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
++ +SW AM+ Y + + +M+ ++PD TL S++S CA+ + G+
Sbjct: 209 RDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGI 268
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H + +GL + + NALV Y G ++++ LF M+ RD +SW ++S Y +
Sbjct: 269 HSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSC 328
Query: 358 NETIDLFEKML-SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
E ++ ++L + P+ +T L ACS + GR M+ + ++ +
Sbjct: 329 VEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGR-TIHAMILQRSLQNVLLIGN 387
Query: 417 CMIDILSRAGRLEEAKSFINKMP 439
++ + S+ +E+ + MP
Sbjct: 388 SLLTMYSKCNSMEDTERVFESMP 410
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/517 (43%), Positives = 311/517 (60%), Gaps = 6/517 (1%)
Query: 134 MKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEG 193
+ D D S T++ + R A+ L R RL D T+ +L AC LLAL EG
Sbjct: 83 LPDPDPFSLNTVLRIAASSAHPRIALALHRR-RLA--PPDTHTYPPLLQACTRLLALREG 139
Query: 194 KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW--KNVVSWTAMLVGYG 251
+ +HA +N VFV ++LV Y C + A VF + +N+VSW +++ G+
Sbjct: 140 ESLHAEAAKNGLVALVFVKNSLVHHYGACGLFESAHRVFDEIPVLERNLVSWNSVMNGFA 199
Query: 252 QNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFIT 311
NG E + IF + PD FT+ SV+++CA + +L G + H + GL+
Sbjct: 200 ANGRPNEVLTIFRETLEADLMPDGFTIVSVLTACAEIGALTLGRRVHVFASKVGLVGNSH 259
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALVSGYAKFGKANETIDLFEKMLSH 370
V NAL+ Y KCG +ED+ ++F EM V R VSWT+L+ G A G + ++LF M
Sbjct: 260 VGNALIDLYAKCGGVEDAWKVFEEMGVARTVVSWTSLIVGLAGNGFGKDALELFGLMERE 319
Query: 371 GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEE 430
L P ++T++GVL ACS GLV+ G YF M +YGI P +H CM+D+L RAGR+EE
Sbjct: 320 RLIPTDITMVGVLYACSHCGLVDDGFRYFNEMQDKYGIAPGIEHLGCMVDLLGRAGRVEE 379
Query: 431 AKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYAS 490
A ++I MP P+A+ W TLL +C +H +E+G+ A L+ELDP + YVLLS++YA+
Sbjct: 380 AHNYITTMPVEPNAVVWRTLLGACAMHKKLELGEAAWARLVELDPGHSGDYVLLSNLYAA 439
Query: 491 KGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRK 550
G+W LR+TM GVRK+PG S ++ ++ V+ F D S P SDQIY L ++ +
Sbjct: 440 VGRWADAHVLRKTMATHGVRKNPGHSLVELRNSVYEFVMGDRSHPESDQIYQTLAEIAER 499
Query: 551 MIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDC 610
+ +GYVP S+VL D+E EK LN+HSE+LAIAF LL PG PIR+VKNLR+C DC
Sbjct: 500 LRCQGYVPRTSNVLADIEEEEKETALNYHSERLAIAFALLKSLPGSPIRIVKNLRMCGDC 559
Query: 611 HNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
H K ISK+ REI+VRD RFH FK GECSC D+W
Sbjct: 560 HLVIKLISKVYDREIIVRDRSRFHHFKGGECSCKDYW 596
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 164/363 (45%), Gaps = 44/363 (12%)
Query: 1 MPFHDGVSWN--LLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCV 58
+P D S N L I+ ++H + A+ L D T+ +L + +
Sbjct: 83 LPDPDPFSLNTVLRIAASSAHPRIALALHRRRLAPPD------THTYPPLLQACTRLLAL 136
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP--EKNIVMYNTMIT 116
G +H K G + VFV + LV Y GL A R FDE+P E+N+V +N+
Sbjct: 137 REGESLHAEAAKNGLVALVFVKNSLVHHYGACGLFESAHRVFDEIPVLERNLVSWNS--- 193
Query: 117 GLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
++ G NG E + +FRE L D FT
Sbjct: 194 ----------------------------VMNGFAANGRPNEVLTIFRETLEADLMPDGFT 225
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
SVLTAC + AL G+++H F + N VG+AL+D+Y KC ++ A VF M
Sbjct: 226 IVSVLTACAEIGALTLGRRVHVFASKVGLVGNSHVGNALIDLYAKCGGVEDAWKVFEEMG 285
Query: 237 -WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
+ VVSWT+++VG NG ++A+++F M+R + P D T+ V+ +C++ +++G
Sbjct: 286 VARTVVSWTSLIVGLAGNGFGKDALELFGLMERERLIPTDITMVGVLYACSHCGLVDDGF 345
Query: 296 Q-FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAK 353
+ F+ G+ I +V G+ G +E++H M V + V W L+ A
Sbjct: 346 RYFNEMQDKYGIAPGIEHLGCMVDLLGRAGRVEEAHNYITTMPVEPNAVVWRTLLGACAM 405
Query: 354 FGK 356
K
Sbjct: 406 HKK 408
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 111/241 (46%), Gaps = 15/241 (6%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSWN +++G A++G N+ + ++ L+ L T ++L + + LGR++H
Sbjct: 189 VSWNSVMNGFAANGRPNEVLTIFRETLEADLMP-DGFTIVSVLTACAEIGALTLGRRVHV 247
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITGLLRRGLVE 125
K G VG+ L+D+YAK G + DA + F+E+ + +V + ++I GL G +
Sbjct: 248 FASKVGLVGNSHVGNALIDLYAKCGGVEDAWKVFEEMGVARTVVSWTSLIVGLAGNGFGK 307
Query: 126 ESRRLFRGMKDKDSISWTTMITGLM----QNGLEREAIDLFREMRLE-GLAMDQFTFGSV 180
++ LF M+ + I + G++ GL + F EM+ + G+A G +
Sbjct: 308 DALELFGLMERERLIPTDITMVGVLYACSHCGLVDDGFRYFNEMQDKYGIAPGIEHLGCM 367
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ G +EE H +I + N V L+ K ++ E+ AW +
Sbjct: 368 VDLLGRAGRVEEA---HNYITTMPVEPNAVVWRTLLGACAMHKKLELGEA-----AWARL 419
Query: 241 V 241
V
Sbjct: 420 V 420
>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/647 (33%), Positives = 362/647 (55%), Gaps = 31/647 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW ++ G+ + G + +K++ M G + + + S+ ++
Sbjct: 95 MPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEE 154
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q HG LK+G S+ FV + LV MY+ +A R D+LP ++ ++++ ++G L
Sbjct: 155 GKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYL- 213
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ G +E +D+ R+ E + T+ S
Sbjct: 214 ------------------------------ECGAFKEGLDVLRKTANEDFVWNNLTYLSS 243
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L L L Q+H+ ++R V AL++MY KC + YA+ VF +N+
Sbjct: 244 LRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNI 303
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
T ++ Y Q+ EEA+ +F M + P+++T +++S A L+ L++G HG
Sbjct: 304 FLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGL 363
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
L +G + + V NALV Y K G+IED+ + F+ M RD V+W ++SG + G E
Sbjct: 364 VLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREA 423
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++ F++M+ G P+ +T IGVL ACS G VE+G HYF ++K++ ++P HYTC++
Sbjct: 424 LEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVG 483
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+LS+AG ++A+ F+ P D + W TLL++C + N +GK AE +E P +
Sbjct: 484 LLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGV 543
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS+I+A +W+ V+++R M +GV+K+PG SWI +++ H+F A+D P I
Sbjct: 544 YVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLI 603
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
YA+++++ K+ GY PD++ HDV+ ++ L++HSEKLA+A+GL+ P P+ V
Sbjct: 604 YAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYV 663
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KN+R+C DCH+A K ISKI++R I++RD+ RFH F +G+CSC D+W
Sbjct: 664 TKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 174/360 (48%), Gaps = 6/360 (1%)
Query: 112 NTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLA 171
N++I ++ +R+LF M +++ +SW M+ G +G + E + LF+ M G +
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES 132
Query: 172 M-DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAES 230
++F V +C +EEGKQ H ++ + FV + LV MY C A
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIR 192
Query: 231 VFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS 290
V + + ++ +++ L GY + G +E + + ++ T S + +NL
Sbjct: 193 VLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRD 252
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
L Q H R + G + + AL+ YGKCG + + R+F++ + ++ T ++
Sbjct: 253 LNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDA 312
Query: 351 YAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP 410
Y + E ++LF KM + + P+E T +L++ + L+++G +++K G R
Sbjct: 313 YFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKS-GYRN 371
Query: 411 IHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL 470
++++ +++G +E+A+ + M F D + W T++S C HG +G+ A E+
Sbjct: 372 HVMVGNALVNMYAKSGSIEDARKAFSGMTF-RDIVTWNTMISGCSHHG---LGREALEAF 427
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 4/211 (1%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFII---RNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
+L C L G+ IHA +I ++ ++ + ++L+++Y KC+ A +F
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLE 292
M +NVVSW AM+ GY +G E +K+F +M +G P++F V SC+N +E
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
EG QFHG L GLIS V N LV Y C ++ R+ +++ D +++ +SGY
Sbjct: 154 EGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYL 213
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVL 383
+ G E +D+ K + + +T + L
Sbjct: 214 ECGAFKEGLDVLRKTANEDFVWNNLTYLSSL 244
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
Query: 278 LGSVISSCANLASLEEGTQFHGRSLVTGLISFITVS---NALVTFYGKCGNIEDSHRLFN 334
L ++ CAN + L G H +VT S + N+L+ Y KC + +LF+
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 335 EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVE 393
M R+ VSW A++ GY G E + LF+ M G +P+E V +CS +G +E
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 394 KGRHYFEIMVKEYGI 408
+G+ + +K YG+
Sbjct: 154 EGKQFHGCFLK-YGL 167
>gi|357490167|ref|XP_003615371.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355516706|gb|AES98329.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 765
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 235/664 (35%), Positives = 366/664 (55%), Gaps = 54/664 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + V+W L+ G+ + A+ ++ ML S T + L +S + L
Sbjct: 134 MNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPSNYTLAIALNACTSLHSLKL 193
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+H +I+K+ +G+ L +Y K G G L
Sbjct: 194 GEQLHAYIIKYHVDFDTSIGNALCSLYTKCG-------------------------GKLE 228
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM--DQFTFG 178
GL FR +K+KD ISWT I+ + G + + +F EM L+ + + +++T
Sbjct: 229 VGLTA-----FRRIKEKDVISWTAAISACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLT 283
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
S L+ C + LE G Q+HA + ++ N+ V ++L+ +Y KC I A+ +F+ M
Sbjct: 284 SALSQCCEVKCLELGIQVHALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMNDV 343
Query: 239 NVVSWTAMLVGYGQ------NGCSE-----EAVKIFCNMQRNGIEPDDFTLGSVISSCAN 287
N+V+W AM+ G+ Q + S EA+ +F + R+G++PD FT SV+S C+
Sbjct: 344 NLVTWNAMIAGHAQMMELSKDNLSAYQKGIEALNLFSKLNRSGMKPDPFTFSSVLSVCSK 403
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
+ +LE+G Q H R++ TG +S + V ++++ Y KCG+IE + ++F EM++R + WT +
Sbjct: 404 MMALEQGEQIHARTIKTGFLSDVVVGSSMINMYNKCGSIERASKVFLEMSIRTMILWTTM 463
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYG 407
++G+A+ G + + ++LFE M G++P+ VT +GVLSAC AG+V + +YFEIM KEY
Sbjct: 464 ITGFAQHGWSKQALNLFEDMKLVGIRPNLVTFVGVLSACGSAGMVNEAFNYFEIMQKEYK 523
Query: 408 IRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAA 467
I+P+ DHY C++D+L R G+++EA I KM + W+ L+ C GN+E+G AA
Sbjct: 524 IKPVMDHYVCLVDMLVRLGQVQEAFDLIKKMDYKASEFIWSNLIVGCLSQGNLELGCDAA 583
Query: 468 ESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF 527
E LL L P + +Y LL + Y S G++D VS++ MRE+ + + SWI K RV+ F
Sbjct: 584 EKLLSLKPKDTETYKLLLNAYVSAGRYDDVSRVENIMREEKIGELKDWSWISIKDRVYSF 643
Query: 528 SADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLN-----HHSEK 582
+D + I LE L+ K GY +L VE S+K K +HSEK
Sbjct: 644 QTND-KADIESSIGKSLEDLHIKAKNLGY-----EMLEYVEKSDKEKEKTSSPTIYHSEK 697
Query: 583 LAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECS 642
LAI FGL +P P+RVVKN +C D HN KYIS +T REI+V+D+ R H F NG+CS
Sbjct: 698 LAITFGLENLPNSSPVRVVKNTLMCRDSHNFVKYISTLTSREIIVKDSKRLHKFVNGQCS 757
Query: 643 CGDF 646
CG+
Sbjct: 758 CGNI 761
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 123/422 (29%), Positives = 206/422 (48%), Gaps = 54/422 (12%)
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
IH HI+K G F+ S LV +YAK G + A++ FD
Sbjct: 95 IHCHIVKTGSHEDPFLSSFLVTVYAKCGRMECAQQVFDH--------------------- 133
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM-DQFTFGSVLT 182
M +++++WT ++ G +QN + + AI LF EM L +T L
Sbjct: 134 ----------MNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPSNYTLAIALN 183
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC-KSIKYAESVFRTMAWKNVV 241
AC L +L+ G+Q+HA+II+ + +G+AL +Y KC ++ + FR + K+V+
Sbjct: 184 ACTSLHSLKLGEQLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRIKEKDVI 243
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRN--GIEPDDFTLGSVISSCANLASLEEGTQFHG 299
SWTA + G+ G + + V++F M + ++P+++TL S +S C + LE G Q H
Sbjct: 244 SWTAAISACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKCLELGIQVHA 303
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK------ 353
G S + V N+L+ Y KCG I ++ RLF MN + V+W A+++G+A+
Sbjct: 304 LCTKLGYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMIAGHAQMMELSK 363
Query: 354 -----FGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
+ K E ++LF K+ G+KPD T VLS CS+ +E+G +K +
Sbjct: 364 DNLSAYQKGIEALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTIKTGFL 423
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
+ + MI++ ++ G +E A +M I W T+++ HG W+ +
Sbjct: 424 SDVVVG-SSMINMYNKCGSIERASKVFLEMSIRT-MILWTTMITGFAQHG------WSKQ 475
Query: 469 SL 470
+L
Sbjct: 476 AL 477
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 123/244 (50%), Gaps = 7/244 (2%)
Query: 156 REAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSAL 215
+EA L +E E +D + +L C + + IH I++ ++ F+ S L
Sbjct: 58 QEAFSLAKESNEE---VDSSFYPPLLQQCLENCSFSSTQIIHCHIVKTGSHEDPFLSSFL 114
Query: 216 VDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPD 274
V +Y KC ++ A+ VF M +N V+WT ++ GY QN + A+ +F M + P
Sbjct: 115 VTVYAKCGRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPS 174
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKC-GNIEDSHRLF 333
++TL +++C +L SL+ G Q H + + ++ NAL + Y KC G +E F
Sbjct: 175 NYTLAIALNACTSLHSLKLGEQLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTAF 234
Query: 334 NEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML--SHGLKPDEVTLIGVLSACSRAGL 391
+ +D +SWTA +S + G+A + + +F +ML ++P+E TL LS C
Sbjct: 235 RRIKEKDVISWTAAISACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKC 294
Query: 392 VEKG 395
+E G
Sbjct: 295 LELG 298
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 5/219 (2%)
Query: 272 EPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHR 331
E D ++ C S H + TG +S+ LVT Y KCG +E + +
Sbjct: 70 EVDSSFYPPLLQQCLENCSFSSTQIIHCHIVKTGSHEDPFLSSFLVTVYAKCGRMECAQQ 129
Query: 332 LFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG-LKPDEVTLIGVLSACSRAG 390
+F+ MN R+ V+WT L+ GY + I LFE+ML H P TL L+AC+
Sbjct: 130 VFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPSNYTLAIALNACTSLH 189
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA-GRLEEAKSFINKMPFPPDAIGWAT 449
++ G ++K Y + + + ++ G+LE + ++ D I W
Sbjct: 190 SLKLGEQLHAYIIK-YHVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRIK-EKDVISWTA 247
Query: 450 LLSSCRIHGNVEIG-KWAAESLLELDPYNPASYVLLSSI 487
+S+C G G + E LL+ P Y L S++
Sbjct: 248 AISACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSAL 286
>gi|302788234|ref|XP_002975886.1| hypothetical protein SELMODRAFT_104103 [Selaginella moellendorffii]
gi|300156162|gb|EFJ22791.1| hypothetical protein SELMODRAFT_104103 [Selaginella moellendorffii]
Length = 679
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 235/646 (36%), Positives = 365/646 (56%), Gaps = 40/646 (6%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
SW+++I +G A+++Y+ M +G+ L + + SS +D GR +
Sbjct: 68 SWSIIIGACVDNGLARRALELYHWMDHEGV-RLDMVVLINPVSACSSLGSLDHGRALEAR 126
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
I GF + V + L++MY K G I +A
Sbjct: 127 ITSMGFHLHPVVWNSLLNMYCKAGSIDNA------------------------------- 155
Query: 128 RRLFRGMK-DKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT--AC 184
R+ F+ M D+ +SWT MI+G +G E A+D FR+M EG+ ++ TF S+L AC
Sbjct: 156 RKFFQDMAGDQSVVSWTAMISGFALHGCEDLALDFFRKMVAEGVRPNEVTFVSILALEAC 215
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF-RTMAWKNVVSW 243
L L GK++H I+ + D+ V ++L++MY KC + A VF R +N+++W
Sbjct: 216 SNLNLLAAGKKLHELIL-DAGLDSSIVRNSLLNMYGKCGGLDEARRVFERCGDCRNLITW 274
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA-SLEEGTQFHGRSL 302
+ M+ Y NG +A+ ++ M G+EPD++T S++ +C+ +L EG H R
Sbjct: 275 STMIAAYSLNGDGRQALSLYKKMDLEGLEPDEYTFTSLLDACSIAGDTLTEGRALHRRLE 334
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
GL + ++ AL+ YG+ G +ED+ R+F +MN + V+WTAL++ +A+ G + ID
Sbjct: 335 AKGLEKKMVLATALINMYGRYGQLEDALRVFEKMNHWNLVAWTALIAAFAQHGNVH-AID 393
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL 422
L +M G++ D + + VL ACS A ++E G F+ MV ++G+R HY+CM+D+L
Sbjct: 394 LSWRMHLEGVQADNIVFLSVLHACSHAVVLEAGLSCFQEMVADFGVRGGAAHYSCMVDLL 453
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYV 482
+R GR+ EA+ ++ MPF P + TLL++CR+ G+ G A L P++ A YV
Sbjct: 454 ARCGRVAEAEELLHSMPFEPAHMEMKTLLAACRVSGDTPRGARVARLASGLIPHDAAPYV 513
Query: 483 LLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWS-SPYSDQIY 541
L+S YA+ KWD V++++ M + GV+K G S ++ K+RVH F A ++S + +I
Sbjct: 514 LMSHAYAAVEKWDEVAEVQERMAKLGVKKPRGWSCVEVKNRVHQFFAGNFSWHSEAAEIE 573
Query: 542 AELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVV 601
EL +L + + GY+PD + H +E K +L HSE++AIAFGLL +P GLPI VV
Sbjct: 574 VELRRLQAVVKEGGYIPDTGQIGHRLEEDGKEDLLALHSERVAIAFGLLRVPAGLPIHVV 633
Query: 602 KNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVCSDCH K IS+ R I+VRDA RFH F+NG CSCGD+W
Sbjct: 634 KNLRVCSDCHAVAKIISRSVGRRIVVRDAYRFHRFENGTCSCGDYW 679
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 126/422 (29%), Positives = 215/422 (50%), Gaps = 37/422 (8%)
Query: 43 ITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDE 102
+ F+++L R + GR+IH I+ G G +F+G+ L+ MY K G +
Sbjct: 1 VAFASLLQQCGRSRSLPEGRRIHAEIVDTGLGKDLFLGNHLIQMYGKCGAM--------- 51
Query: 103 LPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLF 162
EE+R +F ++ + SW+ +I + NGL R A++L+
Sbjct: 52 ----------------------EEARAVFEKIESPNIFSWSIIIGACVDNGLARRALELY 89
Query: 163 REMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC 222
M EG+ +D + ++AC L +L+ G+ + A I + V ++L++MYCK
Sbjct: 90 HWMDHEGVRLDMVVLINPVSACSSLGSLDHGRALEARITSMGFHLHPVVWNSLLNMYCKA 149
Query: 223 KSIKYAESVFRTMAW-KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
SI A F+ MA ++VVSWTAM+ G+ +GC + A+ F M G+ P++ T S+
Sbjct: 150 GSIDNARKFFQDMAGDQSVVSWTAMISGFALHGCEDLALDFFRKMVAEGVRPNEVTFVSI 209
Query: 282 IS--SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM-NV 338
++ +C+NL L G + H L GL S I V N+L+ YGKCG ++++ R+F +
Sbjct: 210 LALEACSNLNLLAAGKKLHELILDAGLDSSI-VRNSLLNMYGKCGGLDEARRVFERCGDC 268
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
R+ ++W+ +++ Y+ G + + L++KM GL+PDE T +L ACS AG
Sbjct: 269 RNLITWSTMIAAYSLNGDGRQALSLYKKMDLEGLEPDEYTFTSLLDACSIAGDTLTEGRA 328
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
++ G+ T +I++ R G+LE+A KM + + W L+++ HG
Sbjct: 329 LHRRLEAKGLEKKMVLATALINMYGRYGQLEDALRVFEKMNH-WNLVAWTALIAAFAQHG 387
Query: 459 NV 460
NV
Sbjct: 388 NV 389
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 181/344 (52%), Gaps = 13/344 (3%)
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
F S+L CG +L EG++IHA I+ ++F+G+ L+ MY KC +++ A +VF +
Sbjct: 2 AFASLLQQCGRSRSLPEGRRIHAEIVDTGLGKDLFLGNHLIQMYGKCGAMEEARAVFEKI 61
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
N+ SW+ ++ NG + A++++ M G+ D L + +S+C++L SL+ G
Sbjct: 62 ESPNIFSWSIIIGACVDNGLARRALELYHWMDHEGVRLDMVVLINPVSACSSLGSLDHGR 121
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM-NVRDEVSWTALVSGYAKF 354
R G V N+L+ Y K G+I+++ + F +M + VSWTA++SG+A
Sbjct: 122 ALEARITSMGFHLHPVVWNSLLNMYCKAGSIDNARKFFQDMAGDQSVVSWTAMISGFALH 181
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLS--ACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
G + +D F KM++ G++P+EVT + +L+ ACS L+ G+ E+++ I
Sbjct: 182 GCEDLALDFFRKMVAEGVRPNEVTFVSILALEACSNLNLLAAGKKLHELILDAGLDSSI- 240
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE--SL 470
++++ + G L+EA+ + + I W+T++++ ++G+ G+ A
Sbjct: 241 -VRNSLLNMYGKCGGLDEARRVFERCGDCRNLITWSTMIAAYSLNGD---GRQALSLYKK 296
Query: 471 LELDPYNPASYVLLSSIYASKGKWDHVSQ---LRRTMREKGVRK 511
++L+ P Y S + A D +++ L R + KG+ K
Sbjct: 297 MDLEGLEPDEYTFTSLLDACSIAGDTLTEGRALHRRLEAKGLEK 340
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 174/345 (50%), Gaps = 14/345 (4%)
Query: 1 MPFH-DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
M FH V WN L++ + GS+++A K + +D G+ S ++++ M+ + C D
Sbjct: 130 MGFHLHPVVWNSLLNMYCKAGSIDNARKFF----QDMAGDQSVVSWTAMISGFALHGCED 185
Query: 60 LGRQIHGHILKFGF--GSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNI---VMYNTM 114
L ++ G FV ++ + L L+ K+ + + + + ++ N++
Sbjct: 186 LALDFFRKMVAEGVRPNEVTFVSILALEACSNLNLLAAGKKLHELILDAGLDSSIVRNSL 245
Query: 115 ITGLLRRGLVEESRRLFRGMKD-KDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
+ + G ++E+RR+F D ++ I+W+TMI NG R+A+ L+++M LEGL D
Sbjct: 246 LNMYGKCGGLDEARRVFERCGDCRNLITWSTMIAAYSLNGDGRQALSLYKKMDLEGLEPD 305
Query: 174 QFTFGSVLTACG-GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
++TF S+L AC L EG+ +H + + + + +AL++MY + ++ A VF
Sbjct: 306 EYTFTSLLDACSIAGDTLTEGRALHRRLEAKGLEKKMVLATALINMYGRYGQLEDALRVF 365
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
M N+V+WTA++ + Q+G + A+ + M G++ D+ SV+ +C++ LE
Sbjct: 366 EKMNHWNLVAWTALIAAFAQHG-NVHAIDLSWRMHLEGVQADNIVFLSVLHACSHAVVLE 424
Query: 293 EG-TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
G + F G+ + +V +CG + ++ L + M
Sbjct: 425 AGLSCFQEMVADFGVRGGAAHYSCMVDLLARCGRVAEAEELLHSM 469
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/572 (38%), Positives = 339/572 (59%), Gaps = 49/572 (8%)
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ--FTFGSVL 181
++ +R++FR M + S+ T+I L ++ +A+ +F EM +E +++ FTF SV
Sbjct: 61 LDYARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEM-VEDCSVEPNCFTFPSVF 119
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK------------------ 223
ACG L EG+Q+H ++ + FV S +V MY C
Sbjct: 120 KACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGC 179
Query: 224 ----------------------------SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGC 255
++ A ++F M ++VVSW M+ GY Q+G
Sbjct: 180 DGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGH 239
Query: 256 SEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNA 315
+EAV++F MQ + P+ TL SV+ + + L +LE G H ++ + + +A
Sbjct: 240 FKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSA 299
Query: 316 LVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPD 375
L+ Y KCG+IE + ++F + R+ V+W+ +++G A G+A +T+D FE M G+ P
Sbjct: 300 LIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPS 359
Query: 376 EVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFI 435
+VT IG+LSACS AGLV +GR +F+ MV+ G+ P +HY CM+D+L RAG LEE++ I
Sbjct: 360 DVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELI 419
Query: 436 NKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWD 495
MP PD + W LL +C++HGNVE+GK AE L+EL P++ SYV LS+IYAS G W+
Sbjct: 420 LNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWE 479
Query: 496 HVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEG 555
V+++R M+E VRKDPGCSWI+ +H F +D S P S +I++ L++++R +I G
Sbjct: 480 GVAKVRLMMKEMDVRKDPGCSWIELDGVIHEFLVEDDSHPKSKKIHSMLQEMSRNLILVG 539
Query: 556 YVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATK 615
Y P+ + VL +++ +K LN+HSEK+AIAFGL+ P P+R+ KNLR+C DCH++ K
Sbjct: 540 YRPNTTQVLTNMDEEDKESSLNYHSEKIAIAFGLISTQPQTPLRITKNLRICEDCHSSIK 599
Query: 616 YISKITQREILVRDAVRFHLFKNGECSCGDFW 647
ISKI +R+I+VRD RFH F NG CSC D+W
Sbjct: 600 LISKIYKRKIIVRDRKRFHHFVNGSCSCMDYW 631
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/365 (33%), Positives = 194/365 (53%), Gaps = 17/365 (4%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
S+N LI + DA+ V+ M++D + TF ++ + GRQ+HG
Sbjct: 78 SYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGL 137
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKR---------GFDELPEK------NIVMYN 112
+KFG S FV S +V MY G++ DA R G D + +K ++V++N
Sbjct: 138 AVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWN 197
Query: 113 TMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM 172
MI G +R G +E +R LF M + +SW MI G Q+G +EA+++FREM++ +
Sbjct: 198 VMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPP 257
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
+ T SVL A L ALE GK +H + +RN+ + +GSAL+DMY KC SI+ A VF
Sbjct: 258 NYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVF 317
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
+ +NVV+W+ ++ G +G +++ + F +M+R G+ P D T ++S+C++ +
Sbjct: 318 EGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVN 377
Query: 293 EGTQFHGRSL-VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
EG F + V+GL I +V G+ G +E+S L M ++ D+V W AL+
Sbjct: 378 EGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGA 437
Query: 351 YAKFG 355
G
Sbjct: 438 CKMHG 442
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 145/324 (44%), Gaps = 55/324 (16%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC--KSIKYAESVFRTMAWKNVVSWTAM 246
+++ KQ+HA +I+ + + L+ + + YA +FR+M N S+ +
Sbjct: 23 TMQDLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNTL 82
Query: 247 LVGYGQNGCSEEAVKIFCNMQRN-GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
+ ++ +A+ +F M + +EP+ FT SV +C L EG Q HG ++ G
Sbjct: 83 IRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFG 142
Query: 306 LISFITVSNALVTFYGKCGNIEDSHR---------------------------------- 331
L S V + +V Y CG +ED+HR
Sbjct: 143 LDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDG 202
Query: 332 ------------LFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTL 379
LF+EM R VSW +++GYA+ G E +++F +M + P+ VTL
Sbjct: 203 YVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTL 262
Query: 380 IGVLSACSRAGLVEKGR--HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINK 437
+ VL A SR G +E G+ H + + G+ + + +ID+ ++ G +E+A
Sbjct: 263 VSVLPAMSRLGALELGKWVHLYAVR-NNIGVDDVLG--SALIDMYAKCGSIEKALQVFEG 319
Query: 438 MPFPPDAIGWATLLSSCRIHGNVE 461
+P + + W+T+++ +HG +
Sbjct: 320 LP-KRNVVTWSTIIAGLAMHGRAK 342
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP VSWN++I+G+A G +AV+V+ M + + +T ++L S ++L
Sbjct: 219 MPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPP-NYVTLVSVLPAMSRLGALEL 277
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +H + ++ G +GS L+DMYAK G I A + F+ LP++N+V ++T+I GL
Sbjct: 278 GKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAM 337
Query: 121 RGLVEESRRLFRGMKD----KDSISWTTMITGLMQNGLEREAIDLFREM-RLEGL 170
G +++ F M+ +++ +++ GL E F M R+ GL
Sbjct: 338 HGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGL 392
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 236/638 (36%), Positives = 332/638 (52%), Gaps = 66/638 (10%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLS-RITFSTMLIMSSSRRCVDL 60
P V +N+L+ G + DA+ ++ M G T+ L ++ + L
Sbjct: 81 PDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAATDGLVL 140
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQIH + G VFV + MYA+ G DA + F+E
Sbjct: 141 GRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEE------------------ 182
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAMDQFTFGS 179
M+ +D +SW MI+G GL A+D+FRE+ L+ D T S
Sbjct: 183 -------------MQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMAS 229
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L + G + + I + VF M +K
Sbjct: 230 ILPSMGK---------------------------------ARVEDIALLKGVFDEMRFKG 256
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
++SW AML Y N EAV++F MQ++GIEPD TL +V+ SC +++L G + H
Sbjct: 257 LISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHE 316
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ S + + NAL+ Y CG ++++ +F+ M RD VSWT+++S Y + G E
Sbjct: 317 VIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGRE 376
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
IDLFEKM GL+PD + + +L+ACS AGL++ G+HYF M E+ I P +HY CM+
Sbjct: 377 AIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMV 436
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L RAG + EA FI MP P+ W LL +CRIH N++IG AA+SLL L P
Sbjct: 437 DLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQTG 496
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
YVLLS+IYA G+W VS +R M KG++K PG S + RVH F D S P S
Sbjct: 497 YYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSKM 556
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY +L +L R++ + GY P++ + LHDVE +K L+ HSEKLAIAF L+ PG PIR
Sbjct: 557 IYKKLSELLRRIREMGYNPEVEATLHDVEEEDKEGHLSVHSEKLAIAFLLINTNPGTPIR 616
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFK 637
+ NLR CSDCH+A K IS I REI+++D R H K
Sbjct: 617 ITMNLRTCSDCHHAAKLISTIAGREIILKDVNRIHYMK 654
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 108/249 (43%), Gaps = 34/249 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M F +SWN +++ + ++ +AV+++ M KDG+ +T +T+L + L
Sbjct: 252 MRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGI-EPDAVTLATVLPSCGEVSALSL 310
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G++IH I + S + + + L+DMYA G + +A+ FD + +++V + ++I+ R
Sbjct: 311 GKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGR 370
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G E AIDLF +M +GL D F ++
Sbjct: 371 HGHGRE-------------------------------AIDLFEKMCGQGLEPDSIAFVAI 399
Query: 181 LTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK- 238
L AC L+ GK + H + + +VD+ + I+ A M K
Sbjct: 400 LAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKP 459
Query: 239 NVVSWTAML 247
N W A+L
Sbjct: 460 NERVWGALL 468
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/528 (40%), Positives = 302/528 (57%), Gaps = 53/528 (10%)
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
D + +VL AC + A GK +H +R+ +++FVG+ALVDMY KC + A VF
Sbjct: 12 DVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASKVF 71
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE-------------------- 272
+ K+VVSW AM+ GY Q G E+A+ +F M+ IE
Sbjct: 72 DRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLGC 131
Query: 273 --------------------------------PDDFTLGSVISSCANLASLEEGTQFHGR 300
P+ FT+ + +CA LA+L G Q H
Sbjct: 132 ETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHAY 191
Query: 301 SLVTGLIS-FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
L S F+ V+N L+ Y K G+I+ + +F+ + ++ VSWT+L++GY G+ E
Sbjct: 192 ILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKE 251
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+++F++M GL+PD VTL+ VL ACS +G++++G +F M KE+G+ P +HY CM+
Sbjct: 252 ALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACMV 311
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L RAGRL EA I M P +I W LLS CRIH NVE+G+ AA+ LLEL+ N
Sbjct: 312 DLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSENDG 371
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
SY LLS+IYA+ +W V+++R M+ G+RK PGCSW++ K F D + P S Q
Sbjct: 372 SYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADKTHPQSKQ 431
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
IY L L +++ GYVP+ S LHDV+ EK+ +L HSEKLA+A+G+L PG PIR
Sbjct: 432 IYEILRSLTQRIKVLGYVPETSFALHDVDDEEKVDLLFEHSEKLALAYGILISAPGAPIR 491
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ KNLRVC DCHNA YIS I EI++RD+ RFH FK G CSC +W
Sbjct: 492 ITKNLRVCGDCHNAITYISMIIDHEIILRDSSRFHHFKKGSCSCSGYW 539
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/316 (34%), Positives = 174/316 (55%), Gaps = 28/316 (8%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +HG ++ G +FVG+ LVDMYAK G++ +A + FD + EK++V +N M+ G +
Sbjct: 32 GKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASKVFDRIKEKDVVSWNAMVNGYSQ 91
Query: 121 RGLVEESRRLFRGMKDKD----SISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ-- 174
G E++ LF M++++ +SW+ +I Q GL E +D+FREM+ G A D
Sbjct: 92 IGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLGCETLDVFREMQ-HGEANDALE 150
Query: 175 ----------------FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVF--VGSALV 216
FT L AC L AL G+QIHA+I+RN H D+ F V + L+
Sbjct: 151 LFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHAYILRN-HFDSAFLYVANCLI 209
Query: 217 DMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDF 276
DMY K I A VF + KN VSWT+++ GYG +G +EA+++F M+R G++PD
Sbjct: 210 DMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALEVFDEMRRVGLQPDGV 269
Query: 277 TLGSVISSCANLASLEEGTQ-FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNE 335
TL V+ +C++ +++G + F+ S G+I +V G+ G + ++ L
Sbjct: 270 TLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACMVDLLGRAGRLNEAMELIEG 329
Query: 336 MNVR-DEVSWTALVSG 350
M + + W AL+SG
Sbjct: 330 MQMEPSSIVWVALLSG 345
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 122/280 (43%), Gaps = 58/280 (20%)
Query: 264 CNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKC 323
C + + PD +L +V+ +CA++ + G HG ++ +G + V NALV Y KC
Sbjct: 2 CKLGDIDMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKC 61
Query: 324 GNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM---------------- 367
G ++++ ++F+ + +D VSW A+V+GY++ G+ + + LFEKM
Sbjct: 62 GMVDEASKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVI 121
Query: 368 ------------------LSHG------------------LKPDEVTLIGVLSACSRAGL 391
+ HG +KP+ T+ L AC+R
Sbjct: 122 AAFAQRGLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAA 181
Query: 392 VEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
+ GR +++ + C+ID+ +++G ++ A+ + + + + W +L+
Sbjct: 182 LRLGRQIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLK-QKNFVSWTSLM 240
Query: 452 SSCRIHGNVEIGKWAAESLLELDP--YNPASYVLLSSIYA 489
+ +HG GK A E E+ P LL +YA
Sbjct: 241 TGYGMHGR---GKEALEVFDEMRRVGLQPDGVTLLVVLYA 277
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 21/183 (11%)
Query: 7 VSWNLLISGHAS---------------HGSVNDAVKVYNLMLK-DGLGNLSRITFSTMLI 50
VSW+ +I+ A HG NDA+++++ M K DGL + T S LI
Sbjct: 115 VSWSAVIAAFAQRGLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALI 174
Query: 51 MSSSRRCVDLGRQIHGHILKFGFGS-YVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIV 109
+ + LGRQIH +IL+ F S +++V + L+DMYAK G I A+ FD L +KN V
Sbjct: 175 ACARLAALRLGRQIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFV 234
Query: 110 MYNTMITGLLRRGLVEESRRLFRGMK----DKDSISWTTMITGLMQNGLEREAIDLFREM 165
+ +++TG G +E+ +F M+ D ++ ++ +G+ + I+ F M
Sbjct: 235 SWTSLMTGYGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSM 294
Query: 166 RLE 168
E
Sbjct: 295 SKE 297
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/574 (39%), Positives = 332/574 (57%), Gaps = 42/574 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCV-- 58
+P H+ S+N +I G+A +A+ ++ L+ K GLG L ++ S + R C
Sbjct: 336 LPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLG-LDEVSLS-----GAFRACAVI 389
Query: 59 --DL-GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
DL G Q+HG +K S + V + ++DMY K G + +A F+E
Sbjct: 390 KGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEE------------- 436
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
M +D++SW +I QNG E + + LF M G+ D+F
Sbjct: 437 ------------------MVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEF 478
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
T+GSVL AC G AL G +IH II++ + FVG AL+DMY KC ++ AE + +
Sbjct: 479 TYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRL 538
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
A + VVSW A++ G+ SEEA K F M G++PD+FT +++ +CANL ++E G
Sbjct: 539 AEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGK 598
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
Q H + + L S +S+ LV Y KCGN++D +F + RD V+W A+V GYA+ G
Sbjct: 599 QIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHG 658
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
E + +FE M +KP+ T + VL AC GLVEKG HYF M+ YG+ P +HY
Sbjct: 659 LGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHY 718
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
+C++DI+ R+G++ +A I MPF DA+ W TLLS C+IHGNVE+ + AA S+L+L+P
Sbjct: 719 SCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEP 778
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSP 535
+ A+YVLLS+IYA+ G W+ V++LR+ MR G++K+PGCSWI+ KS VH F D + P
Sbjct: 779 EDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHP 838
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVEL 569
S +IY L+ L +M GY+PD +L+D EL
Sbjct: 839 RSKEIYENLDVLTDEMKWVGYMPDTDFILNDDEL 872
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 160/515 (31%), Positives = 261/515 (50%), Gaps = 48/515 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDG-LGNL-SRITFSTMLIMSSSRRCV 58
MP D VSWN LISG+ +G D KV ++ L+ G +G + R TF+ +L SS
Sbjct: 134 MPERDVVSWNSLISGYLHNG---DHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDH 190
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G QIHG +K GF V GS L+DMYAK + + + F +PEKN V
Sbjct: 191 GGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWV--------- 241
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
SW+ +I G +QN R ++LF+EM+ G+ + Q TF
Sbjct: 242 ----------------------SWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFA 279
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
SV +C GL AL G Q+H ++ D +V +G+A +DMY KC ++ A+ +F ++
Sbjct: 280 SVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNH 339
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
N+ S+ A++VGY ++ EA+ +F +Q++G+ D+ +L +CA + EG Q H
Sbjct: 340 NLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVH 399
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G S+ + S I V+NA++ YGKCG + ++ +F EM RD VSW A+++ + + G
Sbjct: 400 GLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEE 459
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT-- 416
+T+ LF ML G++PDE T VL AC+ + G ++K R D +
Sbjct: 460 KTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKS---RLGLDSFVGI 516
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL--D 474
+ID+ S+ G +E+A+ +++ + W ++S + E + +LE+ D
Sbjct: 517 ALIDMYSKCGMMEKAEKLHDRLA-EQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVD 575
Query: 475 PYNPASYVLLSS----IYASKGKWDHVSQLRRTMR 505
P N +L + + GK H +++ ++
Sbjct: 576 PDNFTYATILDTCANLVTVELGKQIHAQIIKKELQ 610
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 141/445 (31%), Positives = 229/445 (51%), Gaps = 14/445 (3%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
TFS + S R+ + G+Q H ++ F VFV + L+ MY K + A + FD +
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
P+++ V +N M+ G RG + +++LF M ++D +SW ++I+G + NG R+ ID+F
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
+M G D+ TF VL +C L G QIH ++ +V GSAL+DMY KCK
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK 223
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
+ + F +M KN VSW+A++ G QN +++F MQ+ G+ T SV
Sbjct: 224 KLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFR 283
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
SCA L++L G+Q HG +L T + + + A + Y KC N+ D+ +LFN + + S
Sbjct: 284 SCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQS 343
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
+ A++ GYA+ K E + +F + GL DEV+L G AC+ V KG + V
Sbjct: 344 YNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACA----VIKG-DLEGLQV 398
Query: 404 KEYGIRPIHDHYTC----MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
++ + C ++D+ + G L EA +M DA+ W ++++ +GN
Sbjct: 399 HGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEM-VSRDAVSWNAIIAAHEQNGN 457
Query: 460 VE----IGKWAAESLLELDPYNPAS 480
E + W +S +E D + S
Sbjct: 458 EEKTLSLFVWMLQSGMEPDEFTYGS 482
>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/720 (31%), Positives = 372/720 (51%), Gaps = 75/720 (10%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P + WN ++ + DA+++ M + + T +L R ++ G
Sbjct: 193 PLQEDFLWNTIVMANLRSERWEDALELSRRM-QSASAKATDGTIVKLLQACGKLRALNEG 251
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+QIHG++++FG S + + +V MY++ + A+ FD + N+ +N++I+
Sbjct: 252 KQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYAVN 311
Query: 122 GLVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
G + + LFR M+ D I+W ++++G + G + R ++ G D +
Sbjct: 312 GCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCSI 371
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
S L A L GK+IH +I+R+ + +V+V ++LVDMY K ++ AE VF
Sbjct: 372 TSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFHHTKN 431
Query: 238 KNV-----------------------------------VSWTAMLVGYGQNGCSEEAVKI 262
KN+ V+W +++ GY +GCSEEA+ +
Sbjct: 432 KNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVSGYSMSGCSEEALAV 491
Query: 263 -----------------------------------FCNMQRNGIEPDDFTLGSVISSCAN 287
F MQ ++P+ T+ +++ +CA
Sbjct: 492 INRIKSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRACAG 551
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
+ L++G + H S+ G + I ++ AL+ Y K G ++ +H +F + + W +
Sbjct: 552 PSLLKKGEEIHCFSMKHGFVDDIYIATALIDMYSKGGKLKVAHEVFRNIKEKTLPCWNCM 611
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYG 407
+ GYA +G E LF+ M G++PD +T +LS C +GLV G YF+ M +Y
Sbjct: 612 MMGYAIYGHGEEVFTLFDNMCKTGIRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYS 671
Query: 408 IRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAA 467
I P +HY+CM+D+L +AG L+EA FI+ MP DA W +L++CR+H +++I + AA
Sbjct: 672 INPTIEHYSCMVDLLGKAGFLDEALDFIHAMPQKADASIWGAVLAACRLHKDIKIAEIAA 731
Query: 468 ESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF 527
+L L+PYN A+YVL+ +IY++ +W V +L+ +M GV+ SWI+ + +H+F
Sbjct: 732 RNLFRLEPYNSANYVLMMNIYSTFERWGDVERLKESMTAMGVKIPNVWSWIQVRQTIHVF 791
Query: 528 SADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAF 587
S + S P +IY +L +L ++ K GYVPD + V +++ SEK K+L H+EKLA+ +
Sbjct: 792 STEGKSHPEEGEIYFDLYQLISEIKKLGYVPDTNCVHQNIDDSEKEKVLLSHTEKLAMTY 851
Query: 588 GLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
GL+ I G PIRVVKN R+C DCH A KYIS REI +RD RFH F NGECSC D W
Sbjct: 852 GLMKIKGGTPIRVVKNTRICQDCHTAAKYISLARNREIFLRDGGRFHHFMNGECSCNDRW 911
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 121/490 (24%), Positives = 208/490 (42%), Gaps = 77/490 (15%)
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
LG ++H +LK GF V + L+++Y K I A + FDE P + ++NT++ L
Sbjct: 149 LGMEVHACLLKRGFQVDVHLSCALINLYEKCLGIDRANQVFDETPLQEDFLWNTIVMANL 208
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
R S W +A++L R M+ T
Sbjct: 209 R------------------SERW-------------EDALELSRRMQSASAKATDGTIVK 237
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L ACG L AL EGKQIH ++IR N + +++V MY + ++ A +VF + N
Sbjct: 238 LLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHN 297
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS---------------- 283
+ SW +++ Y NGC A +F M+ + I+PD T S++S
Sbjct: 298 LASWNSIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIR 357
Query: 284 ----------SCANLASLEE---------GTQFHGRSLVTGLISFITVSNALVTFYGKCG 324
SC+ ++L+ G + HG + + L + V +LV Y K
Sbjct: 358 SLQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKND 417
Query: 325 NIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
+E + +F+ ++ +W +L+SGY G + L +M G+K D VT ++S
Sbjct: 418 CLEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVS 477
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP---FP 441
S +G E+ +K G+ P +T MI + +A F ++M
Sbjct: 478 GYSMSGCSEEALAVIN-RIKSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQEENVK 536
Query: 442 PDAIGWATLLSSCR----IHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHV 497
P++ +TLL +C + EI ++ + D Y + + +Y+ GK
Sbjct: 537 PNSTTISTLLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIATALI---DMYSKGGKLKVA 593
Query: 498 SQLRRTMREK 507
++ R ++EK
Sbjct: 594 HEVFRNIKEK 603
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 189/418 (45%), Gaps = 12/418 (2%)
Query: 102 ELPEKN--IVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQ-NGLEREA 158
++P+K + M +M+ L G E + ++F ++ + W + + G E
Sbjct: 56 KMPKKGNLVTMDGSMMRNYLEFGDFESATKVFFVGFARNYLLWNSFLEEFASFGGDSHEI 115
Query: 159 IDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDM 218
+++F+E+ +G+ D VL C L+ L G ++HA +++ + +V + AL+++
Sbjct: 116 LEVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEVHACLLKRGFQVDVHLSCALINL 175
Query: 219 YCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
Y KC I A VF + W +++ ++ E+A+++ MQ + D T+
Sbjct: 176 YEKCLGIDRANQVFDETPLQEDFLWNTIVMANLRSERWEDALELSRRMQSASAKATDGTI 235
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
++ +C L +L EG Q HG + G +S ++ N++V+ Y + +E + +F+
Sbjct: 236 VKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTED 295
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
+ SW +++S YA G N DLF +M S +KPD +T +LS G E
Sbjct: 296 HNLASWNSIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTN 355
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRL---EEAKSFINKMPFPPDAIGWATLLSSCR 455
+ + G +P T + + G +E +I + D +L+
Sbjct: 356 IRSL-QSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYI 414
Query: 456 IHGNVEIGKWAAESLL-ELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKD 512
+ +E AE + N ++ L S Y KG +D+ +L M+E+G++ D
Sbjct: 415 KNDCLE----KAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKAD 468
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 157/344 (45%), Gaps = 8/344 (2%)
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDN-VFVGSALVDMYCKCKSIKYAESVFRTM 235
F GG+ L +++HA +I+ K N V + +++ Y + + A VF
Sbjct: 31 FSPFFHPLGGIRTLNSVRELHAQMIKMPKKGNLVTMDGSMMRNYLEFGDFESATKVFFVG 90
Query: 236 AWKNVVSWTAMLVGYGQ-NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
+N + W + L + G S E +++F + G++ D L V+ C L L G
Sbjct: 91 FARNYLLWNSFLEEFASFGGDSHEILEVFKELHDKGVKFDSKALTVVLKICLALMELWLG 150
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
+ H L G + +S AL+ Y KC I+ ++++F+E ++++ W +V +
Sbjct: 151 MEVHACLLKRGFQVDVHLSCALINLYEKCLGIDRANQVFDETPLQEDFLWNTIVMANLRS 210
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
+ + ++L +M S K + T++ +L AC + + +G+ +++ +G
Sbjct: 211 ERWEDALELSRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIR-FGRVSNTSI 269
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
++ + SR RLE A++ + + W +++SS ++G + G W +E
Sbjct: 270 CNSIVSMYSRNNRLELARAVFDSTE-DHNLASWNSIISSYAVNGCLN-GAWDLFREMESS 327
Query: 475 PYNP--ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCS 516
P ++ L S + +G +++V R+++ G + D CS
Sbjct: 328 SIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPD-SCS 370
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/589 (37%), Positives = 335/589 (56%), Gaps = 37/589 (6%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H H+ K G FV + L+ MY K LI +A++ FDE P+
Sbjct: 29 GKQLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDNARKLFDENPQ--------------- 73
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SR+L ++ + ++++G N ++ + LF EMR G+ ++ T +
Sbjct: 74 ------SRKL--------TVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGL 119
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ CG L G +H F ++ + VG+ L+ MY K I +F M K +
Sbjct: 120 VQPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGL 179
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
++W AM+ GY QNG + ++++ M+ G PD TL V+SSCA+L +L G + +
Sbjct: 180 ITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERK 239
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
G S ++NALV Y +CGN++ + +F+ M V+ VSWTA++ GY G+
Sbjct: 240 MEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVA 299
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LF++M+ G+KPD + VLSACS AGL KG YF +M ++YG+RP +HY+CM+D
Sbjct: 300 VGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVD 359
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAGRL EA+ I M D W LL +C+IH NVE+ + A E ++EL+P N
Sbjct: 360 LLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELEPTNTGY 419
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS++Y G + + ++R MR++ ++KDPGCS++++K RVH+F A D + P +++I
Sbjct: 420 YVLLSNVYTEAGNLEGILRVRMLMRKRKLKKDPGCSYVEFKGRVHLFFAGDRNHPQTNEI 479
Query: 541 YAELEKLNRKMIKEGYVPDMSSV-LHDVELSEK-IKMLNHHSEKLAIAFGLLFIPPGLPI 598
Y +L +L E V D+ +D E E+ + + HSEKLA+AF LL I
Sbjct: 480 YKKLNEL------ENLVKDLDGCKKNDHERREEYLNSMGVHSEKLAVAFALLNTRKETEI 533
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
++KNLR+C DCH K +SKI R+ +VRDA RFH FKNG CSC ++W
Sbjct: 534 IIIKNLRICGDCHLFIKLVSKIVDRQFVVRDATRFHHFKNGFCSCKEYW 582
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 181/381 (47%), Gaps = 38/381 (9%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V +N L+SG+A + V D V ++ M + G+ ++ +T ++ + LG +HG
Sbjct: 79 VCYNSLLSGYALNSRVKDVVVLFCEMRELGV-EINGVTMLGLVQPCGIPGNLGLGMCVHG 137
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+KFG VG+ L+ MY K G ++
Sbjct: 138 FCVKFGLDMDSSVGNCLLTMYVK-------------------------------SGEIDC 166
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
R+LF M K I+W MI G QNGL ++L++EM +G D T VL++C
Sbjct: 167 GRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAH 226
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L AL GK++ + N F+ +ALV+MY +C ++K A +F M K+VVSWTA+
Sbjct: 227 LGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAI 286
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG-RSLVTG 305
+ GYG +G E AV +F M R GI+PD SV+S+C++ +G + G G
Sbjct: 287 IGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYG 346
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKANETIDL- 363
L + +V G+ G + ++ L M VR D W AL+ G K + E +L
Sbjct: 347 LRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALWGALL-GACKIHRNVELAELA 405
Query: 364 FEKMLSHGLKPDEVTLIGVLS 384
FE+++ L+P +LS
Sbjct: 406 FEQVIE--LEPTNTGYYVLLS 424
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 154/300 (51%), Gaps = 4/300 (1%)
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M G + + FTF + +C L GKQ+H + + FV ++L+ MY KC
Sbjct: 1 MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60
Query: 225 IKYAESVF--RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
I A +F + K V + ++L GY N ++ V +FC M+ G+E + T+ ++
Sbjct: 61 IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
C +L G HG + GL +V N L+T Y K G I+ +LF+EM + +
Sbjct: 121 QPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLI 180
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
+W A+++GYA+ G AN ++L+++M S G PD +TL+GVLS+C+ G + G+ E
Sbjct: 181 TWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKE-VERK 239
Query: 403 VKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
++ +G ++++ +R G L++A+ + MP + W ++ +HG E+
Sbjct: 240 MEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPV-KSVVSWTAIIGGYGMHGQGEV 298
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 32/184 (17%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP ++WN +I+G+A +G N+ +++Y M G +T +L + + +
Sbjct: 174 MPRKGLITWNAMINGYAQNGLANNVLELYKEMESKGFCP-DPLTLVGVLSSCAHLGALSV 232
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+++ + FGF S F+ + LV+MYA+ G + A+ FD +P K++V
Sbjct: 233 GKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVV----------- 281
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SWT +I G +G A+ LF EM G+ D F SV
Sbjct: 282 --------------------SWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSV 321
Query: 181 LTAC 184
L+AC
Sbjct: 322 LSAC 325
>gi|356534091|ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic-like [Glycine max]
Length = 903
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/643 (35%), Positives = 364/643 (56%), Gaps = 47/643 (7%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVK-VYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
P +D W +ISG + V +AV + ++ L L N T++++L SSS ++L
Sbjct: 281 PKYDVCLWTSIISGFVQNSQVREAVNALVDMELSGILPN--NFTYASLLNASSSVLSLEL 338
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q H ++ G ++VG+ LVDMY K +T G+
Sbjct: 339 GEQFHSRVIMVGLEGDIYVGNALVDMYMKCS--------------------HTTTNGV-- 376
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ FRG+ + ISWT++I G ++G E E++ LF EM+ G+ + FT ++
Sbjct: 377 --------KAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTI 428
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC + ++ + K++H +II+ ++ VG+ALVD Y A SV M +++
Sbjct: 429 LGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRDI 488
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+++T + Q G E A+++ +M + ++ D+F+L S IS+ A L +E G Q H
Sbjct: 489 ITYTTLAARLNQQGDHEMALRVITHMCNDEVKMDEFSLASFISAAAGLGIMETGKQLHCY 548
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
S +G +VSN+LV Y KCG++ D++R+F ++ D VSW L+SG A G ++
Sbjct: 549 SFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRVSWNGLISGLASNGLISDA 608
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ F+ M G+KPD VT + ++ ACS+ L+ +G YF M K Y I P DHY C++D
Sbjct: 609 LSAFDDMRLAGVKPDSVTFLSLIFACSQGSLLNQGLDYFYSMEKTYHITPKLDHYVCLVD 668
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L R GRLEEA I MPF PD++ + TLL++C +HGNV +G+ A LELDP +PA
Sbjct: 669 LLGRGGRLEEAMGVIETMPFKPDSVIYKTLLNACNLHGNVPLGEDMARRCLELDPCDPAI 728
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
Y+LL+S+Y + G D + R+ MRE+G+R+ P W++ KS++++FSA + +D+I
Sbjct: 729 YLLLASLYDNAGLPDFGDKTRKLMRERGLRRSPRQCWMEVKSKIYLFSAREKIG--NDEI 786
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
+LE L ++ GY E +K+ +HSE+LA+AFG+L +P PIR+
Sbjct: 787 NEKLESLITEIKNRGYPYQ--------ESEDKL----YHSEQLALAFGVLSVPTLAPIRI 834
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSC 643
KN +C+ CH+ +++ REI+VRD RFH+FK+G+CSC
Sbjct: 835 NKNSLICTHCHSFIMLLTQFVDREIIVRDRKRFHVFKDGQCSC 877
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 136/489 (27%), Positives = 245/489 (50%), Gaps = 42/489 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSW L+S H + +A++++++ML G + T S+ L S+ +
Sbjct: 77 MPHRDVVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCP-NEFTLSSALRSCSALGEFEF 135
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +IH ++K G +G+ LVD+Y K
Sbjct: 136 GAKIHASVVKLGLELNHVLGTTLVDLYTKCDCTV-------------------------- 169
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
E +L +KD D +SWTTMI+ L++ EA+ L+ +M G+ ++FTF +
Sbjct: 170 -----EPHKLLAFVKDGDVVSWTTMISSLVETSKWSEALQLYVKMIEAGIYPNEFTFVKL 224
Query: 181 LTACGGL-LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
L L L GK +H+ +I + N+ + +A++ MY KC+ ++ A V + +
Sbjct: 225 LGMPSFLGLGKGYGKVLHSQLITFGVEMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKYD 284
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
V WT+++ G+ QN EAV +M+ +GI P++FT S++++ +++ SLE G QFH
Sbjct: 285 VCLWTSIISGFVQNSQVREAVNALVDMELSGILPNNFTYASLLNASSSVLSLELGEQFHS 344
Query: 300 RSLVTGLISFITVSNALVTFYGKCGN-IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
R ++ GL I V NALV Y KC + + + F + + + +SWT+L++G+A+ G
Sbjct: 345 RVIMVGLEGDIYVGNALVDMYMKCSHTTTNGVKAFRGIALPNVISWTSLIAGFAEHGFEE 404
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSR-AGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
E++ LF +M + G++P+ TL +L ACS+ +++ + + I+ + I +
Sbjct: 405 ESVQLFAEMQAAGVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGN--A 462
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL----LEL 473
++D + G +EA S I M D I + TL + G+ E+ + +++
Sbjct: 463 LVDAYAGGGMADEAWSVIGMMNH-RDIITYTTLAARLNQQGDHEMALRVITHMCNDEVKM 521
Query: 474 DPYNPASYV 482
D ++ AS++
Sbjct: 522 DEFSLASFI 530
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 200/452 (44%), Gaps = 53/452 (11%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +H I+K G +++ + L+ +YAK + A+ FDE+P
Sbjct: 35 GACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEMPH--------------- 79
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+D +SWTT+++ +N EA+ LF M G ++FT S
Sbjct: 80 ----------------RDVVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSA 123
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L +C L E G +IHA +++ + N +G+ LVD+Y KC + + +V
Sbjct: 124 LRSCSALGEFEFGAKIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDV 183
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWT M+ + EA++++ M GI P++FT ++ + L L +G +G+
Sbjct: 184 VSWTTMISSLVETSKWSEALQLYVKMIEAGIYPNEFTFVKLLGMPSFLG-LGKG---YGK 239
Query: 301 SLVTGLISF-----ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
L + LI+F + + A++ Y KC +ED+ ++ + D WT+++SG+ +
Sbjct: 240 VLHSQLITFGVEMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNS 299
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE--IMVKEYGIRPIHD 413
+ E ++ M G+ P+ T +L+A S +E G + IMV G D
Sbjct: 300 QVREAVNALVDMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEG-----D 354
Query: 414 HYT--CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG-NVEIGKWAAESL 470
Y ++D+ + + P+ I W +L++ HG E + AE
Sbjct: 355 IYVGNALVDMYMKCSHTTTNGVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAE-- 412
Query: 471 LELDPYNPASYVLLSSIYASKGKWDHVSQLRR 502
++ P S+ LS+I + K + Q ++
Sbjct: 413 MQAAGVQPNSFT-LSTILGACSKMKSIIQTKK 443
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 141/276 (51%), Gaps = 8/276 (2%)
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL+ C L+EG +H+ II+ + ++++ + L+ +Y KC + A +F M ++
Sbjct: 23 VLSLCNSQ-TLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEMPHRD 81
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VVSWT +L + +N EA+++F M +G P++FTL S + SC+ L E G + H
Sbjct: 82 VVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHA 141
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ GL + LV Y KC + H+L + D VSWT ++S + K +E
Sbjct: 142 SVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSE 201
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE---YGIRPIHDHYT 416
+ L+ KM+ G+ P+E T + +L S GL G+ Y +++ + +G+ T
Sbjct: 202 ALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGL---GKGYGKVLHSQLITFGVEMNLMLKT 258
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+I + ++ R+E+A + P D W +++S
Sbjct: 259 AIICMYAKCRRMEDAIKVSQQTP-KYDVCLWTSIIS 293
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 5/170 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +++ L + G A++V M D + + + ++ + ++ ++
Sbjct: 483 MNHRDIITYTTLAARLNQQGDHEMALRVITHMCNDEV-KMDEFSLASFISAAAGLGIMET 541
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H + K GF V + LV Y+K G + DA R F ++ E + V +N +I+GL
Sbjct: 542 GKQLHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRVSWNGLISGLAS 601
Query: 121 RGLVEESRRLFRGMK----DKDSISWTTMITGLMQNGLEREAIDLFREMR 166
GL+ ++ F M+ DS+++ ++I Q L + +D F M
Sbjct: 602 NGLISDALSAFDDMRLAGVKPDSVTFLSLIFACSQGSLLNQGLDYFYSME 651
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/653 (34%), Positives = 359/653 (54%), Gaps = 42/653 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D +SWN +++ + G A+KV+ ML ++ +TF++ L
Sbjct: 322 MPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMK-KEINYVTFTSALAACLDPEFFTN 380
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +HG ++ G + +G+ L+ Y K + +AK
Sbjct: 381 GKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAK----------------------- 417
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL--AMDQFTFG 178
++F+ M D ++W +I G N EA+ F+ MR EG +D T
Sbjct: 418 --------KVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMR-EGSTSGVDYITIV 468
Query: 179 SVLTACGGLLALEE----GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
++L +C L E+ G IHA + + V S+L+ MY KC + + +F
Sbjct: 469 NILGSC---LTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQ 525
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
+ +K W A++ + G EEA+K+ M+ GIE D F + +S A+LA LEEG
Sbjct: 526 LVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEG 585
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
Q HG ++ G + NA + YGKCG ++D+ R+ + R +SW L+S A+
Sbjct: 586 QQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISISARH 645
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G+ ++ + F ML G+KP+ V+ + +LSACS GLV++G Y+ M YGI+P +H
Sbjct: 646 GQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEH 705
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
CMID+L R+GRL EA++FI +MP PP+ + W +LL+SCRI+ N+++G+ AA+ LLELD
Sbjct: 706 CVCMIDLLGRSGRLVEAEAFITEMPIPPNDLVWRSLLASCRIYRNLDLGRKAAKHLLELD 765
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS 534
P + ++YVL S+++A+ G+W+ V +R M ++K P SW+K+K + IF D +
Sbjct: 766 PSDDSAYVLYSNVFATIGRWEDVEDVRGQMGAHKIQKKPAHSWVKWKGNISIFGMGDQTH 825
Query: 535 PYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPP 594
P +QI +L L + + + GYVPD S L D + +K + HSE++A+AFGL+ IP
Sbjct: 826 PQMEQINGKLLGLMKIVGEAGYVPDTSYSLQDTDEEQKEHNMWSHSERIALAFGLINIPE 885
Query: 595 GLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G +R+ KNLRVC DCH+ K++S + R+I++RD RFH F NG CSC D+W
Sbjct: 886 GSTVRIFKNLRVCGDCHSFFKFVSGVLGRKIVLRDPYRFHHFTNGNCSCSDYW 938
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/473 (26%), Positives = 219/473 (46%), Gaps = 67/473 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGL----GNLSRITFSTMLIMSSSRR 56
MP + VSW L+ ++ +GS + + Y M +G+ N++ + S +M
Sbjct: 120 MPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMD---- 175
Query: 57 CVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMIT 116
+ LG Q+ GH LKFG + V + L+ M+ G I +A F+E
Sbjct: 176 -IILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNE-------------- 220
Query: 117 GLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
M ++D+ISW ++I+ QN L E+ F MRL ++ T
Sbjct: 221 -----------------MNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTT 263
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
+L+ CG + L+ GK +H ++ + N+ + + L+ +Y K AE +FR M
Sbjct: 264 LSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMP 323
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
++++SW +ML Y Q+G A+K+F M E + T S +++C + G
Sbjct: 324 ERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKI 383
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
HG +V GL + + N L+TFYGKC + ++ ++F M D+V+W AL+ G+A +
Sbjct: 384 LHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAE 443
Query: 357 ANETIDLFEKMLSHGLKP--DEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
NE + F K++ G D +T++ +L +C E ++K YGI PIH H
Sbjct: 444 LNEAVAAF-KLMREGSTSGVDYITIVNILGSCLT----------HEDLIK-YGI-PIHAH 490
Query: 415 ------------YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCR 455
+ +I + ++ G L + +++ F ++ A + ++ R
Sbjct: 491 TVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANAR 543
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 174/332 (52%), Gaps = 3/332 (0%)
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G + ++ +F M +++ SW M++G ++ G EA+ FR++ G+ F S++
Sbjct: 6 GRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMIASLV 65
Query: 182 TACG-GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
TAC + +EG Q H F I+ +VFVG++ V Y + A+ +F M +NV
Sbjct: 66 TACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNV 125
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWT+++V Y NG +E + + M+ GI ++ + VISSC L + G Q G
Sbjct: 126 VSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGH 185
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+L GL + ++ +N+L+ +G CG+I ++ +FNEMN RD +SW +++S A+ E+
Sbjct: 186 ALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEES 245
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
F M + + TL +LS C ++ G+ + VK YG+ ++
Sbjct: 246 FRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVK-YGLESNICLCNTLLS 304
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ S AGR ++A+ +MP D I W ++L+
Sbjct: 305 VYSDAGRSKDAELIFRRMP-ERDLISWNSMLA 335
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/493 (24%), Positives = 224/493 (45%), Gaps = 40/493 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + SWN ++SG+ GS +AV + + G+ + S + + S
Sbjct: 18 MSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMIASLVTACNKSSIMAKE 77
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q HG +K G VFVG+ V YA G++ +A++ F+E
Sbjct: 78 GFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNE------------------ 119
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
M D++ +SWT+++ NG ++E I+ ++ MR EG+ ++ V
Sbjct: 120 -------------MPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALV 166
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+++CG L+ + G Q+ ++ + V ++L+ M+ C I A S+F M ++
Sbjct: 167 ISSCGFLMDIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDT 226
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
+SW +++ QN EE+ + F M+ E + TL ++S C ++ L+ G HG
Sbjct: 227 ISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGL 286
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ GL S I + N L++ Y G +D+ +F M RD +SW ++++ Y + G+
Sbjct: 287 AVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCA 346
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR--HYFEIMVKEYGIRPIHDHYTCM 418
+ +F +ML + + VT L+AC G+ H F +++ G++ +
Sbjct: 347 LKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVL---GLQDELIIGNTL 403
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKW-AAESLLELDPYN 477
I + ++ EAK +MP D + W L+ N E+ + AA L+ +
Sbjct: 404 ITFYGKCHKMAEAKKVFQRMP-KLDKVTWNALIGG--FANNAELNEAVAAFKLMREGSTS 460
Query: 478 PASYVLLSSIYAS 490
Y+ + +I S
Sbjct: 461 GVDYITIVNILGS 473
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 126/238 (52%), Gaps = 5/238 (2%)
Query: 218 MYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFT 277
MY K I YA+ VF M+ +N SW M+ GY + G EAV F ++ GI+P F
Sbjct: 1 MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60
Query: 278 LGSVISSCANLASL--EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNE 335
+ S++++C N +S+ +EG QFHG ++ GLI + V + V FY G + ++ ++FNE
Sbjct: 61 IASLVTAC-NKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNE 119
Query: 336 MNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG 395
M R+ VSWT+L+ Y+ G E I+ +++M G+ +E + V+S+C + G
Sbjct: 120 MPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILG 179
Query: 396 RHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+K +G+ +I + G + EA S N+M D I W +++S+
Sbjct: 180 HQLLGHALK-FGLETKVSAANSLIFMFGGCGDINEACSIFNEMN-ERDTISWNSIISA 235
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/590 (38%), Positives = 341/590 (57%), Gaps = 35/590 (5%)
Query: 63 QIHGHILKFG-FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
Q+H L+ G F S + S L+ MY DA+R FDE+P+ N V+ M +G +R
Sbjct: 114 QLHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRN 173
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
LV S LFR M DS S +D E A+ F+ + +
Sbjct: 174 NLVYHSLELFRAMIASDSAS----------------VVD-------EAAALVAFSASARV 210
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK--CKSIKYAESVFRTMAWKN 239
G +L HA I + + N V + ++D Y K + ++ A VF TM ++
Sbjct: 211 PDRGVTASL------HALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RD 263
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQR--NGIEPDDFTLGSVISSCANLASLEEGTQF 297
VVSW +M+ Y QNG S EA+ ++ M GI+ + L +V+ +CA+ +++ G +
Sbjct: 264 VVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRI 323
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H + + GL + V ++V Y KCG +E + R F ++ ++ +SW+A+++GY G+
Sbjct: 324 HNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRG 383
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
E +++F +M GL+P+ +T I VL+ACS AGL+++GR+++ M +E+GI +HY C
Sbjct: 384 QEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGC 443
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
M+D+L RAG L+EA S I +M PDA W LLS+CRIH NVE+ + + + L ELD N
Sbjct: 444 MVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASN 503
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
YVLLS+IYA W V ++R ++ + + K PG S + K ++++F D S P
Sbjct: 504 SGYYVLLSNIYAEARMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQH 563
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
+IY+ LEKL +M + GYVP+ SVLHD++ EK L HSEKLA+AF L+ P
Sbjct: 564 IEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSV 623
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
I ++KNLRVCSDCH A K+I+KIT+REI++RD RFH FK+G CSC D+W
Sbjct: 624 IHIIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 673
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 184/358 (51%), Gaps = 41/358 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + V + SG+ + V +++++ M+ ++ + ++ S+S R D
Sbjct: 155 IPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVD-EAAALVAFSASARVPDR 213
Query: 61 G--RQIHGHILKFGFGSYVFVGSPLVDMYAKLGL--IYDAKRGFDELPEKNIVMYNTMIT 116
G +H I K GF V + ++D YAK G + A++ FD + E+++V +N+MI
Sbjct: 214 GVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIA 272
Query: 117 GLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL--EGLAMDQ 174
L+ QNG+ EAI L+ +M G+ +
Sbjct: 273 -------------LY------------------AQNGMSAEAIGLYSKMLNVGGGIKCNA 301
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
+VL AC A++ GK+IH ++R ++NV+VG+++VDMY KC ++ A FR
Sbjct: 302 VALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRK 361
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
+ KN++SW+AM+ GYG +G +EA++IF M+R+G+ P+ T SV+++C++ L+EG
Sbjct: 362 IKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEG 421
Query: 295 TQ-FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
++ G+ + + +V G+ G +++++ L EM V+ D W AL+S
Sbjct: 422 RYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSA 479
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/515 (40%), Positives = 302/515 (58%), Gaps = 1/515 (0%)
Query: 134 MKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEG 193
M ++SWT +I M G EAI + R G+ D FT VLTAC + LE G
Sbjct: 1 MPHPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETG 60
Query: 194 KQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
+ + A + + ++VFV +A +D+Y KC ++ A SVF M ++ V+W AM+ GY
Sbjct: 61 EAVWAAARQEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYAS 120
Query: 253 NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITV 312
NG EA+ +F MQ G +PD +T+ +S+C L +L+ G Q G ++ +
Sbjct: 121 NGHPREALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPVL 180
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGL 372
AL+ Y KCG+ ++ +F +M RD + W A++ G G L +M G+
Sbjct: 181 GTALIDMYAKCGSTSEAWMVFQQMLERDIIVWNAMILGLGMTGHEKIAFALVGQMKKSGV 240
Query: 373 KPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAK 432
K ++ T IG+L +C+ GLV GR YF M Y I P +HY CM+D+ SRAG LEEA
Sbjct: 241 KLNDNTFIGLLCSCTHTGLVNDGRQYFHNMTHVYRISPRIEHYGCMVDLFSRAGLLEEAH 300
Query: 433 SFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKG 492
I MP +A+ W LL C+IH N ++ + A + L+ L+P+N +YV+LS+IY++ G
Sbjct: 301 QLIGDMPMLANAVVWGALLGGCKIHRNADLAEHALKQLIRLEPWNSGNYVMLSNIYSNSG 360
Query: 493 KWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMI 552
+W+ ++LR M+ KG+ K P SW++ +VH F D S P SD+IYA+L++L +M
Sbjct: 361 RWEDAAKLRLEMKAKGIEKVPASSWVELDGKVHKFYVGDDSHPLSDKIYAKLDELGMEMK 420
Query: 553 KEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHN 612
GY P V+ DVE EK L HHSEK+AIAF L+ PG IRV KNLRVC+DCH+
Sbjct: 421 AMGYEPTTEVVMFDVENEEKENTLVHHSEKIAIAFSLITTEPGETIRVTKNLRVCTDCHS 480
Query: 613 ATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
A K IS+IT REI+VRD RFH F++G CSC D+W
Sbjct: 481 AIKLISRITCREIVVRDNNRFHCFRDGHCSCNDYW 515
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 176/375 (46%), Gaps = 43/375 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP VSW LI+ + G +A+ V G+ S F+ + ++++ R DL
Sbjct: 1 MPHPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDS---FTAVRVLTACARVADL 57
Query: 61 --GRQIHGHILKF-GFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
G + + G VFV + +D+Y K G + A+ FDE
Sbjct: 58 ETGEAVWAAARQEEGVAESVFVATAALDLYVKCGEMEKARSVFDE--------------- 102
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
MK++D+++W M+ G NG REA+DLF M++EG D +T
Sbjct: 103 ----------------MKNRDAVAWGAMVGGYASNGHPREALDLFFAMQMEGAKPDCYTV 146
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
L+AC L AL+ G+Q + ++ N +G+AL+DMY KC S A VF+ M
Sbjct: 147 VGALSACTRLGALDLGRQAVGMVHWDEVLGNPVLGTALIDMYAKCGSTSEAWMVFQQMLE 206
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ- 296
++++ W AM++G G G + A + M+++G++ +D T ++ SC + + +G Q
Sbjct: 207 RDIIVWNAMILGLGMTGHEKIAFALVGQMKKSGVKLNDNTFIGLLCSCTHTGLVNDGRQY 266
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN-VRDEVSWTALVSGYAKFG 355
FH + V + I +V + + G +E++H+L +M + + V W AL+ G
Sbjct: 267 FHNMTHVYRISPRIEHYGCMVDLFSRAGLLEEAHQLIGDMPMLANAVVWGALLGGC---- 322
Query: 356 KANETIDLFEKMLSH 370
K + DL E L
Sbjct: 323 KIHRNADLAEHALKQ 337
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 236/650 (36%), Positives = 365/650 (56%), Gaps = 45/650 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVY----NLMLKDGLGNLSRITFSTMLIMSSSRR 56
MP D +SWN +ISG+ +G ++ ++++ L + L L+ + + L+ RR
Sbjct: 257 MPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL--GDRR 314
Query: 57 CVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMIT 116
LGR IH +++ GF + V + L MY
Sbjct: 315 ---LGRDIHAYVITTGFAVDISVCNSLTQMY----------------------------- 342
Query: 117 GLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
L G E+ +LF M+ KD +SWTTMI+G N L +AID +R M + + D+ T
Sbjct: 343 --LNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEIT 400
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
+VL+AC L L+ G ++H I+ V V + L++MY KCK I A +F +
Sbjct: 401 VAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP 460
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
KNV+SWT+++ G N EA+ IF + ++P+ TL + +++CA + +L G +
Sbjct: 461 RKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKE 519
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H L TG+ + NAL+ Y +CG + + FN +D SW L++GY++ G+
Sbjct: 520 IHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQ 578
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
+ ++LF++M+ ++PDE+T I +L CS++ +V +G YF M ++YG+ P HY
Sbjct: 579 GSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYA 637
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY 476
C++D+L RAG L+EA FI KMP PD W LL++CRIH +++G+ +A+ + ELD
Sbjct: 638 CVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKK 697
Query: 477 NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPY 536
+ Y+LL ++YA GKW V+++RR M+E G+ D GCSW++ K +VH F +DD P
Sbjct: 698 SVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQ 757
Query: 537 SDQIYAELEKLNRKMIKEGYVP-DMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
+ +I LE KM + G SS + + E+S ++ HSE+ AIAFGL+ PG
Sbjct: 758 TKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRD-EIFCGHSERKAIAFGLINTVPG 816
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGD 645
+PI V KNL +C +CH+ K+ISK +REI VRDA FH FK+GECSCGD
Sbjct: 817 MPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 224/445 (50%), Gaps = 35/445 (7%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
SWN+L+ G+A G ++A+ +Y+ ML G TF +L + G+++H H
Sbjct: 162 SWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVH 221
Query: 68 ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
++++G+ E +I + N +IT ++ G V+ +
Sbjct: 222 VVRYGY-------------------------------ELDIDVVNALITMYVKCGDVKSA 250
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
R LF M +D ISW MI+G +NG+ E ++LF MR + D T SV++AC L
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
G+ IHA++I ++ V ++L MY S + AE +F M K++VSWT M+
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
GY N ++A+ + M ++ ++PD+ T+ +V+S+CA L L+ G + H ++ LI
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
S++ V+N L+ Y KC I+ + +F+ + ++ +SWT++++G + E + +F +
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQ 489
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
+ L+P+ +TL L+AC+R G + G+ V G+ ++D+ R GR
Sbjct: 490 MKMTLQPNAITLTAALAACARIGALMCGKE-IHAHVLRTGVGLDDFLPNALLDMYVRCGR 548
Query: 428 LEEAKSFINKMPFPPDAIGWATLLS 452
+ A S N D W LL+
Sbjct: 549 MNTAWSQFNSQ--KKDVTSWNILLT 571
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 188/347 (54%), Gaps = 3/347 (0%)
Query: 112 NTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLF-REMRLEGL 170
N + +R G + ++ +F M +++ SW ++ G + G EA+ L+ R + + G+
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 171 AMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAES 230
D +TF VL CGG+ L GK++H ++R ++ ++ V +AL+ MY KC +K A
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 231 VFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS 290
+F M ++++SW AM+ GY +NG E +++F M+ ++PD TL SVIS+C L
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
G H + TG I+V N+L Y G+ ++ +LF+ M +D VSWT ++SG
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 372
Query: 351 YAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP 410
Y ++ ID + M +KPDE+T+ VLSAC+ G ++ G ++ +K I
Sbjct: 373 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 432
Query: 411 IHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIH 457
+ +I++ S+ +++A + +P + I W ++++ R++
Sbjct: 433 VIVANN-LINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRLN 477
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 159/309 (51%), Gaps = 9/309 (2%)
Query: 148 GLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKD 207
GL NG EA+ L M+ +A+D+ F +++ C A EEG ++++ + +
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 208 NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM- 266
V +G+A + M+ + ++ A VF M+ +N+ SW ++ GY + G +EA+ ++ M
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 267 QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
G++PD +T V+ +C + L G + H + G I V NAL+T Y KCG++
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 327 EDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSAC 386
+ + LF+ M RD +SW A++SGY + G +E ++LF M + PD +TL V+SAC
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
Query: 387 SRAGLVEKGRH-YFEIMVKEYGIRPIHDHYTC--MIDILSRAGRLEEAKSFINKMPFPPD 443
G GR + ++ + + D C + + AG EA+ ++M D
Sbjct: 308 ELLGDRRLGRDIHAYVITTGFAV----DISVCNSLTQMYLNAGSWREAEKLFSRME-RKD 362
Query: 444 AIGWATLLS 452
+ W T++S
Sbjct: 363 IVSWTTMIS 371
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 3/207 (1%)
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
L G NG EEA+K+ +MQ + D+ +++ C + EEG++ + +L +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ + NA + + + GN+ D+ +F +M+ R+ SW LV GYAK G +E + L+ +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 367 ML-SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
ML G+KPD T VL C + +G+ + V YG D +I + +
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKE-VHVHVVRYGYELDIDVVNALITMYVKC 244
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLS 452
G ++ A+ ++MP D I W ++S
Sbjct: 245 GDVKSARLLFDRMP-RRDIISWNAMIS 270
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/539 (38%), Positives = 323/539 (59%), Gaps = 18/539 (3%)
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+ ++F ++ + +T +I GL+ + + I L+ +M L D + SVL ACG
Sbjct: 83 ASKIFSHTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSVLKACGC 142
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS---- 242
LAL+EG+++H+ +++ N + L+++Y KC + + A VF M ++VV+
Sbjct: 143 HLALKEGREVHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVVASTVM 202
Query: 243 --------------WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL 288
WTAM+ G +NG S A+++F NMQR + P++ T+ V+S+C+ L
Sbjct: 203 INYYFDHGIKDTVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSACSEL 262
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
+L+ G + V AL+ Y +CG+I+++ R+F +M ++ +++ +++
Sbjct: 263 GALQLGRWVRSYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYNSMI 322
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
G+A GK+ E ++LF ++ G P VT +GVL+ACS GL E G F M K+YGI
Sbjct: 323 MGFALHGKSVEAVELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYGI 382
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
P +HY CM+D+L R GRLEEA SFI M PD + LLS+C+IHGN+E+ + A+
Sbjct: 383 EPQIEHYGCMVDLLGRLGRLEEAYSFIRMMKVAPDHVMLGALLSACKIHGNLELAERVAK 442
Query: 469 SLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFS 528
SL+ + +Y+LLS+ Y+S GKW +++R MRE+G+ K+PGCS I+ + +H F
Sbjct: 443 SLVACKNADSGTYILLSNAYSSSGKWKEAAEVRTNMREEGIEKEPGCSSIEVNNEIHEFL 502
Query: 529 ADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFG 588
D P ++IY +LE+LN+ + EGY P VLHD+E SEK L HSE+LAI +G
Sbjct: 503 LGDLRHPQKEKIYKKLEELNQILRLEGYTPATEVVLHDIEKSEKEWALAIHSERLAICYG 562
Query: 589 LLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
L+ P +RVVKNLRVC+DCH K IS IT+R+I+VRD RFH F+NG CSCGD+W
Sbjct: 563 LISTKPLTTLRVVKNLRVCNDCHLTIKLISNITRRKIVVRDRNRFHHFENGVCSCGDYW 621
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 190/384 (49%), Gaps = 17/384 (4%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
+ LI G D + +Y M+ L S +++L + GR++H +
Sbjct: 98 YTALIDGLVLSCYYTDGIHLYYQMINSSLVPDS-YAVTSVLKACGCHLALKEGREVHSQV 156
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
LK G S + L+++Y K G DA+R FDE+PE+++V MI G+
Sbjct: 157 LKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVVASTVMINYYFDHGI----- 211
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
KD++ WT MI GL++NG A+++FR M+ E + ++ T VL+AC L
Sbjct: 212 --------KDTVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSACSELG 263
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
AL+ G+ + +++ ++ + N FVG AL++MY +C I A+ VF M KNV+++ +M++
Sbjct: 264 ALQLGRWVRSYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYNSMIM 323
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHGRSLVTGLI 307
G+ +G S EAV++F + + G P T V+++C++ E G + FH + G+
Sbjct: 324 GFALHGKSVEAVELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYGIE 383
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKANETIDLFEK 366
I +V G+ G +E+++ M V D V AL+S G E + K
Sbjct: 384 PQIEHYGCMVDLLGRLGRLEEAYSFIRMMKVAPDHVMLGALLSACKIHGNL-ELAERVAK 442
Query: 367 MLSHGLKPDEVTLIGVLSACSRAG 390
L D T I + +A S +G
Sbjct: 443 SLVACKNADSGTYILLSNAYSSSG 466
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 143/283 (50%), Gaps = 24/283 (8%)
Query: 196 IHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGC 255
I+A IIRN H + FV L+ + SI YA +F NV +TA++ G +
Sbjct: 51 IYAKIIRNHHHQDPFVVFELLRVCSNLNSIGYASKIFSHTQNPNVYLYTALIDGLVLSCY 110
Query: 256 SEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNA 315
+ + ++ M + + PD + + SV+ +C +L+EG + H + L GL S ++
Sbjct: 111 YTDGIHLYYQMINSSLVPDSYAVTSVLKACGCHLALKEGREVHSQVLKLGLSSNRSIRIK 170
Query: 316 LVTFYGKCGNIEDSHRLFNEM------------------NVRDEVSWTALVSGYAKFGKA 357
L+ YGKCG ED+ R+F+EM ++D V WTA++ G + G++
Sbjct: 171 LIELYGKCGAFEDARRVFDEMPERDVVASTVMINYYFDHGIKDTVCWTAMIDGLVRNGES 230
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT- 416
N +++F M + P+EVT++ VLSACS G ++ GR M K R +H+
Sbjct: 231 NRALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWVRSYMDKH---RIELNHFVG 287
Query: 417 -CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+I++ SR G ++EA+ +M + I + +++ +HG
Sbjct: 288 GALINMYSRCGDIDEAQRVFEQMK-EKNVITYNSMIMGFALHG 329
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 143/281 (50%), Gaps = 18/281 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVY-NLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQ 63
D V W +I G +G N A++V+ N+ +D + N +T +L S + LGR
Sbjct: 213 DTVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPN--EVTIVCVLSACSELGALQLGRW 270
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
+ ++ K FVG L++MY++ G I +A+R F+++ EKN++ YN+MI G G
Sbjct: 271 VRSYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGK 330
Query: 124 VEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQFTFG 178
E+ LFRG+ + S+++ ++ GL ++F M + G+ +G
Sbjct: 331 SVEAVELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYG 390
Query: 179 SVLTACGGLLALEEGKQIHAFI-IRNDHKDNVFVGSALVDMYCKCK-SIKYAESVFRTM- 235
++ G L LEE ++FI + D+V +G+ L CK +++ AE V +++
Sbjct: 391 CMVDLLGRLGRLEEA---YSFIRMMKVAPDHVMLGALLSA--CKIHGNLELAERVAKSLV 445
Query: 236 AWKNVVSWTAMLV--GYGQNGCSEEAVKIFCNMQRNGIEPD 274
A KN S T +L+ Y +G +EA ++ NM+ GIE +
Sbjct: 446 ACKNADSGTYILLSNAYSSSGKWKEAAEVRTNMREEGIEKE 486
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/605 (36%), Positives = 349/605 (57%), Gaps = 37/605 (6%)
Query: 60 LGRQIHGHILKFGFGSYV-FVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
L R +H L+ S V +PL+ MYA LGL DA+R FDE+P K+ V++ T+I GL
Sbjct: 120 LCRMLHAACLRTMLPSAARIVANPLIHMYASLGLTDDARRAFDEVPVKDAVVWATVIGGL 179
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+R GL++E+RRL +++ +SWT++I G + G +A+ F M +G+ D+
Sbjct: 180 VRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVEPDEVAVI 239
Query: 179 SVLTACGGLLALEEGKQIHAFI--IRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT-- 234
L+AC L LE G+ +H + R D + V L+DMY KC I A++VF
Sbjct: 240 GALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVV--TLIDMYAKCGDIAQAQAVFDAVG 297
Query: 235 ------------------------------MAWKNVVSWTAMLVGYGQNGCSEEAVKIFC 264
M ++V+++ +M+ GY +G +A+++F
Sbjct: 298 RGQKPEPWNVIIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFM 357
Query: 265 NMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCG 324
++R+G+ D+FT+ S++++CA+L +L +G H + + + ALV Y KCG
Sbjct: 358 QLRRHGMRADNFTVVSLLTACASLGALPQGRALHASIEQRIVEEDVYLVTALVDMYMKCG 417
Query: 325 NIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLS 384
++++ +F+ M RD +W+A+++G A G + ++ F +M G +P VT I VL+
Sbjct: 418 RVDEATAVFHRMGERDVHTWSAMIAGLAFNGMGMDALESFCQMKRDGFQPTSVTYIAVLT 477
Query: 385 ACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDA 444
ACS + L+ +GR +F M + + P +HY CMID+L+R+G L+EA + MP P+A
Sbjct: 478 ACSHSSLLNEGRQHFNEMRSLHKLHPQIEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNA 537
Query: 445 IGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTM 504
+ WA++LS+CR+H N+++ + AAE LL+L P A YV L +IY +W ++R M
Sbjct: 538 VIWASILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWVEAKRIRMLM 597
Query: 505 REKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVL 564
E+GV+K G S I +VH F +D S P++ +I +E++ R++ GY P S +
Sbjct: 598 EEQGVKKTAGYSSITVAGQVHKFVVNDQSHPWTLEIITMMEEIARRLKSAGYSPATSRIA 657
Query: 565 HDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQRE 624
DV+ EK + L HSEK+AIAFGL+ +PP LPI ++KNLRVC DCH+A K IS++ RE
Sbjct: 658 VDVDEEEKEQALLAHSEKIAIAFGLISLPPNLPIHIMKNLRVCEDCHSAIKLISQLWNRE 717
Query: 625 ILVRD 629
I+VRD
Sbjct: 718 IIVRD 722
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/384 (32%), Positives = 205/384 (53%), Gaps = 18/384 (4%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P + VSW LI+G++ G DAV +N ML DG+ + L S + ++ G
Sbjct: 196 PERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGV-EPDEVAVIGALSACSKLKNLEFG 254
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL-----PEKNIVMYNTMIT 116
R +H + K + L+DMYAK G I A+ FD + PE +N +I
Sbjct: 255 RLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQKPEP----WNVIID 310
Query: 117 GLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
G + G V+ +R LF M +D I++ +MITG + +G R+A+ LF ++R G+ D FT
Sbjct: 311 GYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQLRRHGMRADNFT 370
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
S+LTAC L AL +G+ +HA I + +++V++ +ALVDMY KC + A +VF M
Sbjct: 371 VVSLLTACASLGALPQGRALHASIEQRIVEEDVYLVTALVDMYMKCGRVDEATAVFHRMG 430
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
++V +W+AM+ G NG +A++ FC M+R+G +P T +V+++C++ + L EG Q
Sbjct: 431 ERDVHTWSAMIAGLAFNGMGMDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLNEGRQ 490
Query: 297 -FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKF 354
F+ + L I ++ + G ++++ L M ++ + V W +++S
Sbjct: 491 HFNEMRSLHKLHPQIEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWASILSAC--- 547
Query: 355 GKANETIDLFEKMLSHGLK--PDE 376
+ ++ IDL H LK P+E
Sbjct: 548 -RVHKNIDLARHAAEHLLKLAPEE 570
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 164/384 (42%), Gaps = 77/384 (20%)
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNV-FVGSALVDMYCKCKSIKYAESVF- 232
FTF V C + +HA +R V + L+ MY A F
Sbjct: 103 FTFHFVFRCCAAGAGAGLCRMLHAACLRTMLPSAARIVANPLIHMYASLGLTDDARRAFD 162
Query: 233 -----RTMAW-------------------------KNVVSWTAMLVGYGQNGCSEEAVKI 262
+ W +NVVSWT+++ GY + G +AV
Sbjct: 163 EVPVKDAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYC 222
Query: 263 FCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH---GR-------SLVTGLIS---- 308
F M +G+EPD+ + +S+C+ L +LE G H G+ LV LI
Sbjct: 223 FNCMLSDGVEPDEVAVIGALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAK 282
Query: 309 ----------FITVS--------NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
F V N ++ Y K G+++ + LF++M RD +++ ++++G
Sbjct: 283 CGDIAQAQAVFDAVGRGQKPEPWNVIIDGYCKLGHVDIARSLFDQMGARDVITFNSMITG 342
Query: 351 YAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY---FEIMVKEYG 407
Y G+ + + LF ++ HG++ D T++ +L+AC+ G + +GR E + E
Sbjct: 343 YIHSGRLRDALQLFMQLRRHGMRADNFTVVSLLTACASLGALPQGRALHASIEQRIVEED 402
Query: 408 IRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAA 467
+ + T ++D+ + GR++EA + ++M D W+ +++ +G +G A
Sbjct: 403 VYLV----TALVDMYMKCGRVDEATAVFHRMG-ERDVHTWSAMIAGLAFNG---MGMDAL 454
Query: 468 ESLLEL--DPYNPASYVLLSSIYA 489
ES ++ D + P S ++ + A
Sbjct: 455 ESFCQMKRDGFQPTSVTYIAVLTA 478
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 157/363 (43%), Gaps = 45/363 (12%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS----IKYAESVFRTMAWKNV-VSW 243
++ + Q+HA + + + L++ C S ++Y S+F + +
Sbjct: 11 SVRQASQLHAILTTSGRIAHRPSAEHLLNSLTNCLSAPRHLRYVLSLFDRLPHPTTFLHD 70
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
TA+ + ++ V I M+R G+ FT V CA A H L
Sbjct: 71 TALRACLQASAGADHPVLILRRMRRGGVRMSAFTFHFVFRCCAAGAGAGLCRMLHAACLR 130
Query: 304 TGLISFI-TVSNALVTFYGKCGNIEDSHRLFNEMNVRDE--------------------- 341
T L S V+N L+ Y G +D+ R F+E+ V+D
Sbjct: 131 TMLPSAARIVANPLIHMYASLGLTDDARRAFDEVPVKDAVVWATVIGGLVRWGLLDEARR 190
Query: 342 ----------VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGL 391
VSWT+L++GY++ G+ + + F MLS G++PDEV +IG LSACS+
Sbjct: 191 LLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVEPDEVAVIGALSACSKLKN 250
Query: 392 VEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
+E GR ++V + I+ +ID+ ++ G + +A++ + + W ++
Sbjct: 251 LEFGR-LLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNVII 309
Query: 452 SS-CRIHGNVEIGKWAAESLL-ELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGV 509
C++ G+V+I A SL ++ + ++ + + Y G+ QL +R G+
Sbjct: 310 DGYCKL-GHVDI----ARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQLRRHGM 364
Query: 510 RKD 512
R D
Sbjct: 365 RAD 367
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 114/250 (45%), Gaps = 36/250 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +++N +I+G+ G + DA++++ + + G+ T ++L +S +
Sbjct: 328 MGARDVITFNSMITGYIHSGRLRDALQLFMQLRRHGM-RADNFTVVSLLTACASLGALPQ 386
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +H I + V++ + LVDMY K G + +A F + E+++ ++ M
Sbjct: 387 GRALHASIEQRIVEEDVYLVTALVDMYMKCGRVDEATAVFHRMGERDVHTWSAM------ 440
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
I GL NG+ +A++ F +M+ +G T+ +V
Sbjct: 441 -------------------------IAGLAFNGMGMDALESFCQMKRDGFQPTSVTYIAV 475
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVG--SALVDMYCKCKSIKYAESVFRTMAWK 238
LTAC L EG+Q H +R+ HK + + ++D+ + + A + +TM +
Sbjct: 476 LTACSHSSLLNEGRQ-HFNEMRSLHKLHPQIEHYGCMIDLLARSGLLDEAMHLVQTMPMQ 534
Query: 239 -NVVSWTAML 247
N V W ++L
Sbjct: 535 PNAVIWASIL 544
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/559 (37%), Positives = 328/559 (58%), Gaps = 38/559 (6%)
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
S ++F +++ + W TM+ +Q+ +A+ L++ M + D +T+ V+ AC
Sbjct: 82 SLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAV 141
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR------TMAW--- 237
L GK+IH +++ +V+V + L++MY C +++ A +F +++W
Sbjct: 142 RLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSI 201
Query: 238 -------------------------KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE 272
K++VSW+A++ GY QNG EEA+ +F M NG+
Sbjct: 202 LAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMR 261
Query: 273 PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYG----KCGNIED 328
D+ + SV+S+CA+L+ ++ G HG + G+ S++ + NAL+ Y KCG +E+
Sbjct: 262 LDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVEN 321
Query: 329 SHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
+ +FN M + SW AL+ G A G ++D+F +M ++G+ P+E+T +GVL AC
Sbjct: 322 ALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRH 381
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
GLV++GR +F M++++GI P HY CM+D+L RAG L EA+ I MP PD W
Sbjct: 382 MGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWG 441
Query: 449 TLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
LL +C+ HG+ E+G+ L+EL P + +VLLS+I+ASKG W+ V ++R M+++G
Sbjct: 442 ALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQG 501
Query: 509 VRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVE 568
V K PGCS I+ VH F A D + P+ +++ L ++ +++ EGY PD + V D++
Sbjct: 502 VVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDID 561
Query: 569 LSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVR 628
EK L HSEKLAIAFGLL I P PIR++KNLR+C+DCH A K ISK REI+VR
Sbjct: 562 EEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVR 621
Query: 629 DAVRFHLFKNGECSCGDFW 647
D RFH FK G CSC D+W
Sbjct: 622 DRHRFHYFKEGACSCMDYW 640
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 120/382 (31%), Positives = 213/382 (55%), Gaps = 16/382 (4%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL-GRQ 63
+G WN ++ + S A+ +Y LM+K+ +G T+ +++ + + R ++ G++
Sbjct: 93 NGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGP-DNYTYP-LVVQACAVRLLEFGGKE 150
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR-- 121
IH H+LK GF S V+V + L++MYA G + DA++ FDE P + V +N+++ G +++
Sbjct: 151 IHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGD 210
Query: 122 -GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G V E+ +LF M +KD +SW+ +I+G QNG+ EA+ +F EM G+ +D+ SV
Sbjct: 211 MGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSV 270
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALV----DMYCKCKSIKYAESVFRTMA 236
L+AC L ++ GK IH +IR + V + +AL+ DMY KC ++ A VF M
Sbjct: 271 LSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGME 330
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
K V SW A+++G NG E ++ +F M+ NG+ P++ T V+ +C ++ ++EG +
Sbjct: 331 EKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEG-R 389
Query: 297 FHGRSLVT--GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV-SWTALVSGYAK 353
H S++ G+ + +V G+ G + ++ +L M + +V +W AL+ K
Sbjct: 390 CHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKK 449
Query: 354 FGKANETIDLFEKMLSHGLKPD 375
G + K++ L+PD
Sbjct: 450 HGDTEMGERVGRKLIE--LQPD 469
>gi|147864471|emb|CAN82639.1| hypothetical protein VITISV_028820 [Vitis vinifera]
Length = 871
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 235/619 (37%), Positives = 362/619 (58%), Gaps = 32/619 (5%)
Query: 11 LLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSR-RCVDLGRQIHGHIL 69
+LISG A G D + ++ M G+ ++ T S +L SS +G+ IHG IL
Sbjct: 67 VLISGFARIGLSADVLGLFTKMQDQGVCP-NQFTLSIVLKSCSSNVNDSRIGKGIHGWIL 125
Query: 70 KFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRR 129
+ G + + ++D Y K A++ F + EK+ V +N M++ L+ G +++S
Sbjct: 126 RNGVDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVD 185
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
LFR + KD+ SW TMI GLM+NG ER A++L +M G A ++ TF L L
Sbjct: 186 LFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSV 245
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM-------------- 235
L GKQIH +++ D+ FV ++L+DMYCKC ++ A +F+ +
Sbjct: 246 LGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPRESSMMNSEESCD 305
Query: 236 -AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
A VSW++M+ GY QNG E+A+K F +M + +E D FTL SV+S+CA+ LE G
Sbjct: 306 DAVVESVSWSSMVSGYVQNGGFEDALKTFSSMICSQVEVDKFTLTSVVSACASAGVLELG 365
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
Q HG G + + ++++ Y KCG++ D+ +FN+ R+ V WT+++SG A
Sbjct: 366 RQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALH 425
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G+ E + LFE M++ G+ P+EV+ +GVL+ACS AGL+E+G YF +M + YGIRP +H
Sbjct: 426 GQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEH 485
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
+TCM+D+ RAGRL E K FI+ + W + LSSCR+H N+E+G W
Sbjct: 486 FTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIW--------- 536
Query: 475 PYNPASYVLLSSIYASK-GKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWS 533
++ L+ + SK GK +++R M+++GV+K+P SWI+ K+ VH F D S
Sbjct: 537 ---DLTFCFLAFVPLSKDGK--RSAKIRSLMQQRGVKKNPSQSWIQLKNHVHSFVMGDRS 591
Query: 534 SPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIP 593
P +IY+ L++L ++ + GY D++ V+ DVE ++ +L +HSEKLAIA+G++
Sbjct: 592 HPQDTKIYSYLDELIGRLKEIGYSTDVTPVMQDVEQEQRQVLLGYHSEKLAIAYGIISTA 651
Query: 594 PGLPIRVVKNLRVCSDCHN 612
PG PIRV+KNLR C DCHN
Sbjct: 652 PGTPIRVMKNLRXCIDCHN 670
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 97/166 (58%), Gaps = 5/166 (3%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
+ VSW+ ++SG+ +G DA+K ++ M+ + + + T ++++ +S ++LGRQ+
Sbjct: 310 ESVSWSSMVSGYVQNGGFEDALKTFSSMICSQV-EVDKFTLTSVVSACASAGVLELGRQV 368
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG+I K G G VF+GS ++DMY K G + DA F++ ++N+V++ +MI+G G
Sbjct: 369 HGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQG 428
Query: 125 EESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMR 166
E+ RLF M ++ + +S+ ++T GL E FR MR
Sbjct: 429 REAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMR 474
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/526 (40%), Positives = 307/526 (58%)
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G V + R+F + W T+I G + AI L+R+M L G++ + +TFG VL
Sbjct: 55 GHVAYAHRIFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVL 114
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
AC LL L EG+++H+ I++ + + L+ +Y C + YA +F M +
Sbjct: 115 KACCKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSA 174
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW+ M+ GY QNG + EA+K+F MQ + D FTL SV+ C +L +L+ G H
Sbjct: 175 SWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYM 234
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
G+ + + ALV Y KCG+++++ ++F M RD +W+ +++GYA G + +
Sbjct: 235 DKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKAL 294
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
LF+ M P+ VT VLSACS +GLVEKG FE M EY I P HY CM+D+
Sbjct: 295 QLFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDL 354
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
RAG + A FI MP P+ + W TLL +C+ HG ++G+ + +L+LDP +P +Y
Sbjct: 355 FCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENY 414
Query: 482 VLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIY 541
VL+S++YAS G+W V Q+R M++K +K G S I+ VH F D S P ++IY
Sbjct: 415 VLVSNVYASLGRWSSVCQVRSLMKDKAPKKQHGWSSIEINFMVHKFIMGDESHPEREKIY 474
Query: 542 AELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVV 601
L ++ RK+ + G+V VLHD++ EK L HSE+LAIA+GLL P G PIR+V
Sbjct: 475 GMLHQMARKLKQVGHVNSTVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRIV 534
Query: 602 KNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCH K IS++ REI+VRD VRFH F+ CSC D+W
Sbjct: 535 KNLRVCRDCHEVIKLISEVYNREIIVRDRVRFHHFRERGCSCNDYW 580
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 174/357 (48%), Gaps = 43/357 (12%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL--GRQIHG 66
WN +I G++ S A+ +Y M L +S +++ ++ + + + L G+++H
Sbjct: 75 WNTIIRGYSISDSPITAIALYRDMF---LCGISPNSYTFGFVLKACCKLLRLCEGQELHS 131
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
I+K G + + L+ +YA G + A FDE+PE + ++TM++G + G E
Sbjct: 132 QIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVE 191
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+ + LFREM+ E ++ D FT SV+ CG
Sbjct: 192 A-------------------------------LKLFREMQAENVSSDAFTLASVVGVCGD 220
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L AL+ GK +H+++ + K +V +G+ALV MY KC S+ A VF+ MA ++V +W+ M
Sbjct: 221 LGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTM 280
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHGRSLVTG 305
+ GY +G E+A+++F M+R+ P+ T SV+S+C++ +E+G Q F
Sbjct: 281 IAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYK 340
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVS-----GYAKFGK 356
+ I +V + + G + +H+ M + V W L+ GY G+
Sbjct: 341 ITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGE 397
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 119/250 (47%), Gaps = 36/250 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SW+ ++SG+A +G +A+K++ M + + + T ++++ + +DL
Sbjct: 168 MPEPDSASWSTMVSGYAQNGQAVEALKLFREMQAENVSS-DAFTLASVVGVCGDLGALDL 226
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +H ++ K G V +G+ LV MY+K G + +A + F + E+++ ++TMI G
Sbjct: 227 GKWVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAI 286
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G E++ +LF MK +I + TF SV
Sbjct: 287 HGHGEKALQLFDAMKRSKTIP-------------------------------NCVTFTSV 315
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVG--SALVDMYCKCKSIKYAESVFRTMAWK 238
L+AC +E+G QI + ++K + +VD++C+ + +A +TM +
Sbjct: 316 LSACSHSGLVEKGHQIFE-TMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIE 374
Query: 239 -NVVSWTAML 247
NVV W +L
Sbjct: 375 PNVVLWRTLL 384
>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g13880-like [Cucumis sativus]
Length = 839
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/650 (35%), Positives = 359/650 (55%), Gaps = 42/650 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSR--RCVDLGR 62
DGVSWN LI+G+ +G + + + M ++GL + T + L SS C G
Sbjct: 225 DGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLA-FNTYTLGSALKACSSNFNGCKMFGT 283
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
+H H +K G V VG+ L+DMYAK G + DA + FD+
Sbjct: 284 MLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQ-------------------- 323
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQ-----NGLEREAIDLFREMRLEGLAMDQFTF 177
M DK+ + + M+ GL+Q + +A++LF EM+ G+ FT+
Sbjct: 324 -----------MVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTY 372
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
S+L AC + + KQ+HA + +N + ++GS L+D+Y S+ A F ++
Sbjct: 373 SSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHN 432
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
+V TAM+ GY QNG E A+ +F + +PD+F +++SSCAN+ L G Q
Sbjct: 433 LTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQI 492
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
G + G+ F N+ + Y K G++ ++ F +M D VSW+ ++ A+ G A
Sbjct: 493 QGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHA 552
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
E + FE M S G++P+ +GVL ACS GLVE+G YF+ M K+Y ++ H C
Sbjct: 553 MEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVC 612
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
++D+L RAGRL +A+S I ++ F + + W LLS+CRIH + + A+ ++EL+P
Sbjct: 613 VVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLA 672
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
ASYVLL +IY G S++R M E+ ++K+PG SWI+ +V+ F + D S S
Sbjct: 673 SASYVLLYNIYMDAGNKLAASKVRTLMEERRIKKEPGLSWIQIGDKVYSFVSGDRSHKNS 732
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
QIYA+L+++ + D+ + +E E + +N+HSEKLA+AFG+L++ P
Sbjct: 733 GQIYAKLDEMLATTKRLDSAKDILG--YKIE-HEHLTNVNYHSEKLAVAFGVLYLSESAP 789
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+RV+KNLR+C DCH K S + +RE++VRD+VRFH FK+G CSCGD+W
Sbjct: 790 VRVMKNLRICLDCHMTMKLFSIVEKRELIVRDSVRFHHFKDGSCSCGDYW 839
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 126/460 (27%), Positives = 217/460 (47%), Gaps = 41/460 (8%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V++N LISG+ +++ + +++ + GL L + T + L S + G+ IHG
Sbjct: 126 VTYNSLISGYVQMSNLDKVMILFDKARRLGL-KLDKYTCAGALTACSQSGNLSAGKMIHG 184
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
IL +G GS V + + L+DMY+K G + A+ FD + + V +N++I G +
Sbjct: 185 LILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYV------- 237
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
QNG E + + ++M GLA + +T GS L AC
Sbjct: 238 ------------------------QNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSS 273
Query: 187 LL--ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G +H I+ +V VG+AL+DMY K S+ A +F M KNVV +
Sbjct: 274 NFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYN 333
Query: 245 AMLVGYGQ-----NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
AM+ G Q + C+ +A+ +F M+ GI+P FT S++ +C + + Q H
Sbjct: 334 AMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHA 393
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
GL+S + + L+ Y G++ D+ FN ++ V TA++ GY + G+
Sbjct: 394 LMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFES 453
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ LF ++L++ KPDE ++S+C+ G++ G + + GI I
Sbjct: 454 ALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQ-IQGHATKVGISRFTIFQNSQI 512
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+ +++G L A +M PD + W+T++ S HG+
Sbjct: 513 WMYAKSGDLYAANLTFQQME-NPDIVSWSTMICSNAQHGH 551
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 186/380 (48%), Gaps = 43/380 (11%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +H H++K F +F+ + L++MY K G A + FD++ + NIV YN+
Sbjct: 78 GKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNS------- 130
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+I+G +Q + + LF + R GL +D++T
Sbjct: 131 ------------------------LISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGA 166
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LTAC L GK IH I+ V + ++L+DMY KC + YA +F +
Sbjct: 167 LTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDG 226
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC-ANLASLEE-GTQFH 298
VSW +++ GY QNG EE + I M +NG+ + +TLGS + +C +N + GT H
Sbjct: 227 VSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLH 286
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK-- 356
++ GL + V AL+ Y K G+++D+ ++F++M ++ V + A+++G +
Sbjct: 287 DHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIE 346
Query: 357 ---ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
A + ++LF +M S G+KP T +L AC + + +M K G+ + D
Sbjct: 347 DKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKN-GL--LSD 403
Query: 414 HY--TCMIDILSRAGRLEEA 431
Y + +ID+ S G + +A
Sbjct: 404 EYIGSILIDLYSVLGSMMDA 423
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 140/253 (55%), Gaps = 7/253 (2%)
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
L GK +H+ +I+ + +F+ + L++MYCKC + A+ +F M+ N+V++ +++ G
Sbjct: 75 LNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISG 134
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
Y Q ++ + +F +R G++ D +T +++C+ +L G HG LV GL S
Sbjct: 135 YVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQ 194
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
+ ++N+L+ Y KCG ++ + LF+ + D VSW +L++GY + GK E + + +KM
Sbjct: 195 VVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQ 254
Query: 370 HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR-PIHDHY---TCMIDILSRA 425
+GL + TL L ACS G F M+ ++ I+ +H T ++D+ ++
Sbjct: 255 NGLAFNTYTLGSALKACSSNF---NGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKT 311
Query: 426 GRLEEAKSFINKM 438
G L++A ++M
Sbjct: 312 GSLDDAIQIFDQM 324
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 96/193 (49%), Gaps = 9/193 (4%)
Query: 281 VISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD 340
++ S L G H + T + + N L+ Y KCG+ + +LF++M+ +
Sbjct: 65 LVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSN 124
Query: 341 EVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
V++ +L+SGY + ++ + LF+K GLK D+ T G L+ACS++G + G+
Sbjct: 125 IVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGK-MIH 183
Query: 401 IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
++ YG+ +ID+ S+ G+++ A+ + D + W +L I G V
Sbjct: 184 GLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSD-KLDGVSWNSL-----IAGYV 237
Query: 461 EIGKWAAESLLEL 473
+ GK+ E LL +
Sbjct: 238 QNGKY--EELLTI 248
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/530 (41%), Positives = 325/530 (61%), Gaps = 18/530 (3%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW +I+ +A H +A+ + M G+ + TF+++L C DL
Sbjct: 126 MPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGI-QPNHFTFASIL-----PACTDL 179
Query: 61 G--RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
+ H I+K GF S VFVG+ LVDMYAK G I A+ FD++P++++V +N MI G
Sbjct: 180 EVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGY 239
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
++ GL+E++ +LF+ + +D I+W TM+ G Q G A++LF +M + L
Sbjct: 240 VQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLV------- 292
Query: 179 SVLTACGGLLALEEGKQIHAF-IIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
S T G + + G AF + + + NV +A++ + + ++ A +F+TM
Sbjct: 293 SWNTMIAGYV--QNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPE 350
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
NVVSW AM+ GY QNG +E A+K+F MQ ++P+ T V+ +CA LA LE+G +
Sbjct: 351 CNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEA 410
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H + +G S + V N LV Y KCG+IED+ ++F+ M +D S +A++ GYA G +
Sbjct: 411 HEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCS 470
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
E+++LFE+M GLKPD VT +GVLSAC AGLV++GR YF+IM + Y I P +HY C
Sbjct: 471 KESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGC 530
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
MID+L RAG +EA INKMP PDA W +LLS+CR H N+++G+ A+ L+ L+P N
Sbjct: 531 MIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQN 590
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF 527
PA YVLLS+IYA+ G+WD + +R M+++ V+K GCSWI K +VH F
Sbjct: 591 PAPYVLLSNIYAAAGRWDDIGSVRNRMKDRKVKKKLGCSWIVIKKQVHAF 640
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 117/455 (25%), Positives = 218/455 (47%), Gaps = 68/455 (14%)
Query: 12 LISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKF 71
L+ G + +A+ + M+++G+ S T+ ++L + + + + +H H+++
Sbjct: 35 LVKSLCKQGRLREALHILQDMVENGIWPHSS-TYDSLLQGCLNAKSLPDAKLLHAHMIQT 93
Query: 72 GFGSY-VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRL 130
F + +G+ LV +Y KLG + E+RR+
Sbjct: 94 QFECQDISLGNKLVSIYVKLGSLV-------------------------------EARRV 122
Query: 131 FRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLAL 190
F M K+ +SWT MI ++ +EA+ F EM+ G+ + FTF S+L AC L L
Sbjct: 123 FDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEVL 182
Query: 191 EEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGY 250
E H I++ + NVFVG+ LVDMY K I++A +F M ++VVSW AM+ GY
Sbjct: 183 GE---FHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGY 239
Query: 251 GQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFI 310
QNG E+A+K+F + + D T ++++ A +E + + L+S+
Sbjct: 240 VQNGLIEDALKLFQEIPKR----DVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWN 295
Query: 311 TVS---------------------------NALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
T+ NA+++ + + G +E++ +LF M + VS
Sbjct: 296 TMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVS 355
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
W A+++GY++ G+A + LF +M +KP+ T VL AC+ ++E+G E+++
Sbjct: 356 WNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVI 415
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
+ G + ++ + ++ G +E+A+ ++M
Sbjct: 416 RS-GFQSDVLVGNTLVGMYAKCGSIEDARKVFDRM 449
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 183/363 (50%), Gaps = 19/363 (5%)
Query: 145 MITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRND 204
++ L + G REA+ + ++M G+ T+ S+L C +L + K +HA +I+
Sbjct: 35 LVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQ 94
Query: 205 HK-DNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIF 263
+ ++ +G+ LV +Y K S+ A VF M KNVVSWTAM+ Y ++ +EA+ F
Sbjct: 95 FECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFF 154
Query: 264 CNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKC 323
MQ GI+P+ FT S++ +C +L L E FH + G S + V N LV Y K
Sbjct: 155 YEMQDVGIQPNHFTFASILPACTDLEVLGE---FHDEIVKGGFESNVFVGNGLVDMYAKR 211
Query: 324 GNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVL 383
G IE + LF++M RD VSW A+++GY + G + + LF+++ K D +T ++
Sbjct: 212 GCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEI----PKRDVITWNTMM 267
Query: 384 SACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPD 443
+ ++ G VE FE M ++ + + MI + G ++EA MP +
Sbjct: 268 AGYAQCGDVENAVELFEKMPEQNLVS-----WNTMIAGYVQNGSVKEAFKLFQIMP-ERN 321
Query: 444 AIGWATLLSSCRIHGNVEIGKWAAESLLELDPY-NPASYVLLSSIYASKGKWDHVSQLRR 502
I W ++S +G VE A L + P N S+ + + Y+ G+ ++ +L
Sbjct: 322 VISWNAVISGFAQNGQVE----EALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFG 377
Query: 503 TMR 505
M+
Sbjct: 378 QMQ 380
>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Cucumis sativus]
Length = 746
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/650 (35%), Positives = 359/650 (55%), Gaps = 42/650 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSR--RCVDLGR 62
DGVSWN LI+G+ +G + + + M ++GL + T + L SS C G
Sbjct: 132 DGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLA-FNTYTLGSALKACSSNFNGCKMFGT 190
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
+H H +K G V VG+ L+DMYAK G + DA + FD+
Sbjct: 191 MLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQ-------------------- 230
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQ-----NGLEREAIDLFREMRLEGLAMDQFTF 177
M DK+ + + M+ GL+Q + +A++LF EM+ G+ FT+
Sbjct: 231 -----------MVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTY 279
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
S+L AC + + KQ+HA + +N + ++GS L+D+Y S+ A F ++
Sbjct: 280 SSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHN 339
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
+V TAM+ GY QNG E A+ +F + +PD+F +++SSCAN+ L G Q
Sbjct: 340 LTIVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQI 399
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
G + G+ F N+ + Y K G++ ++ F +M D VSW+ ++ A+ G A
Sbjct: 400 QGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHA 459
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
E + FE M S G++P+ +GVL ACS GLVE+G YF+ M K+Y ++ H C
Sbjct: 460 MEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVC 519
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
++D+L RAGRL +A+S I ++ F + + W LLS+CRIH + + A+ ++EL+P
Sbjct: 520 VVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLA 579
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
ASYVLL +IY G S++R M E+ ++K+PG SWI+ +V+ F + D S S
Sbjct: 580 SASYVLLYNIYMDAGNKLAASKVRTLMEERRIKKEPGLSWIQIGDKVYSFVSGDRSHKNS 639
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
QIYA+L+++ + D+ + +E E + +N+HSEKLA+AFG+L++ P
Sbjct: 640 GQIYAKLDEMLATTKRLDSAKDILG--YKIE-HEHLTNVNYHSEKLAVAFGVLYLSESAP 696
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+RV+KNLR+C DCH K S + +RE++VRD+VRFH FK+G CSCGD+W
Sbjct: 697 VRVMKNLRICLDCHMTMKLFSIVEKRELIVRDSVRFHHFKDGSCSCGDYW 746
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 125/460 (27%), Positives = 216/460 (46%), Gaps = 41/460 (8%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V++N LISG+ +++ + +++ + GL L + + L S + G+ IHG
Sbjct: 33 VTYNSLISGYVQMSNLDKVMILFDKARRLGL-KLDKYNCAGALTACSQSGNLSAGKMIHG 91
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
IL +G GS V + + L+DMY+K G + A+ FD + + V +N++I G +
Sbjct: 92 LILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYV------- 144
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
QNG E + + ++M GLA + +T GS L AC
Sbjct: 145 ------------------------QNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSS 180
Query: 187 LL--ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G +H I+ +V VG+AL+DMY K S+ A +F M KNVV +
Sbjct: 181 NFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYN 240
Query: 245 AMLVGYGQ-----NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
AM+ G Q + C+ +A+ +F M+ GI+P FT S++ +C + + Q H
Sbjct: 241 AMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHA 300
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
GL+S + + L+ Y G++ D+ FN ++ V TA++ GY + G+
Sbjct: 301 LMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFES 360
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ LF ++L++ KPDE ++S+C+ G++ G + + GI I
Sbjct: 361 ALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQ-IQGHATKVGISRFTIFQNSQI 419
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+ +++G L A +M PD + W+T++ S HG+
Sbjct: 420 WMYAKSGDLYAANLTFQQME-NPDIVSWSTMICSNAQHGH 458
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 163/319 (51%), Gaps = 12/319 (3%)
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G + +LF M + +++ ++I+G +Q + + LF + R GL +D++ L
Sbjct: 15 GDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAGAL 74
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
TAC L GK IH I+ V + ++L+DMY KC + YA +F + V
Sbjct: 75 TACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGV 134
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC-ANLASLEE-GTQFHG 299
SW +++ GY QNG EE + I M +NG+ + +TLGS + +C +N + GT H
Sbjct: 135 SWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHD 194
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK--- 356
++ GL + V AL+ Y K G+++D+ ++F++M ++ V + A+++G +
Sbjct: 195 HAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIED 254
Query: 357 --ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
A + ++LF +M S G+KP T +L AC + + +M K G+ + D
Sbjct: 255 KCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKN-GL--LSDE 311
Query: 415 Y--TCMIDILSRAGRLEEA 431
Y + +ID+ S G + +A
Sbjct: 312 YIGSILIDLYSVLGSMMDA 330
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 120/223 (53%), Gaps = 7/223 (3%)
Query: 220 CKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLG 279
CKC + A+ +F M+ N+V++ +++ GY Q ++ + +F +R G++ D +
Sbjct: 12 CKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCA 71
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
+++C+ +L G HG LV GL S + ++N+L+ Y KCG ++ + LF+ +
Sbjct: 72 GALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKL 131
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
D VSW +L++GY + GK E + + +KM +GL + TL L ACS G F
Sbjct: 132 DGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNF---NGCKMF 188
Query: 400 EIMVKEYGIR-PIHDHY---TCMIDILSRAGRLEEAKSFINKM 438
M+ ++ I+ +H T ++D+ ++ G L++A ++M
Sbjct: 189 GTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQM 231
>gi|79527297|ref|NP_198857.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171829|sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g40410, mitochondrial; Flags: Precursor
gi|10178153|dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|17065126|gb|AAL32717.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|30725418|gb|AAP37731.1| At5g40410 [Arabidopsis thaliana]
gi|332007162|gb|AED94545.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 608
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/603 (35%), Positives = 347/603 (57%), Gaps = 36/603 (5%)
Query: 50 IMSSSRRCV--DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKN 107
++++ + CV +L R +H ++K + F+G LV Y +LG A++ FDE+PE+
Sbjct: 37 LIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPER- 95
Query: 108 IVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL 167
D +SW ++I+G G + ++ M +
Sbjct: 96 ------------------------------DLVSWNSLISGYSGRGYLGKCFEVLSRMMI 125
Query: 168 E--GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI 225
G ++ TF S+++AC + EEG+ IH +++ + V V +A ++ Y K +
Sbjct: 126 SEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDL 185
Query: 226 KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
+ +F ++ KN+VSW M+V + QNG +E+ + F +R G EPD T +V+ SC
Sbjct: 186 TSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSC 245
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
++ + HG + G ++ AL+ Y K G +EDS +F+E+ D ++WT
Sbjct: 246 EDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWT 305
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE 405
A+++ YA G + I FE M+ +G+ PD VT +L+ACS +GLVE+G+HYFE M K
Sbjct: 306 AMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKR 365
Query: 406 YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKW 465
Y I P DHY+CM+D+L R+G L++A I +MP P + W LL +CR++ + ++G
Sbjct: 366 YRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTK 425
Query: 466 AAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVH 525
AAE L EL+P + +YV+LS+IY++ G W S++R M++KG+ + GCS+I++ +++H
Sbjct: 426 AAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIH 485
Query: 526 IFSADDWSSPYSDQIYAELEKLNRKMIKE-GYVPDMSSVLHDVELSEKIKMLNHHSEKLA 584
F DWS P S++I +L+++ +KM E GY VLHDV K +M+N HSEK+A
Sbjct: 486 KFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIA 545
Query: 585 IAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCG 644
+AFGLL + P PI + KNLR+C DCH K IS I +R I++RD+ RFH F +G CSC
Sbjct: 546 MAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCS 605
Query: 645 DFW 647
D+W
Sbjct: 606 DYW 608
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 163/351 (46%), Gaps = 34/351 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLG-NLSRITFSTMLIMSSSRRCVD 59
MP D VSWN LISG++ G + +V + M+ +G + +TF +M+ +
Sbjct: 92 MPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKE 151
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
GR IHG ++KFG V V + ++ Y K G + + + F++L KN+V
Sbjct: 152 EGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLV---------- 201
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
SW TMI +QNGL + + F R G DQ TF +
Sbjct: 202 ---------------------SWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLA 240
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL +C + + + IH I+ N + +AL+D+Y K ++ + +VF + +
Sbjct: 241 VLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPD 300
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FH 298
++WTAML Y +G +A+K F M GI PD T ++++C++ +EEG F
Sbjct: 301 SMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFE 360
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALV 348
S + + + +V G+ G ++D++ L EM + W AL+
Sbjct: 361 TMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALL 411
>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Brachypodium distachyon]
Length = 1054
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 237/651 (36%), Positives = 379/651 (58%), Gaps = 44/651 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSS--SRRCVDLGR 62
D VSWN +IS +G A+ Y +M + G +S F+ + +SS S R + G+
Sbjct: 440 DRVSWNTIISVLDQNGFCEGAMMNYCMMRQ---GCISPSNFAAISGLSSCASLRLLTAGQ 496
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
Q+H +K+G V + LV MY G
Sbjct: 497 QVHCDAVKWGLDLDTSVSNALVKMYGDCGA------------------------------ 526
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLM--QNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
ES +F M + D +SW + I G+M + E++++F M GL ++ TF ++
Sbjct: 527 -RSESWEIFNSMAEHDIVSWNS-IMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNL 584
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK-N 239
L+A L LE GKQ+HA ++++ ++ V +AL+ Y K + E +F +M+ + +
Sbjct: 585 LSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRD 644
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VSW +M+ GY NG +E + M + D T V+++CA++A+LE G + H
Sbjct: 645 AVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHA 704
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ + L S + V +AL+ Y KCG I+ + ++FN M+ ++E SW +++SGYA+ G +
Sbjct: 705 FGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEK 764
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+++FE+M +G PD VT + VLSACS AGLV++G YFE+M +++GI P +HY+C+I
Sbjct: 765 ALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFEMM-EDHGILPHIEHYSCVI 823
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN---VEIGKWAAESLLELDPY 476
D+L RAG+L + + +IN+MP P+ + W T+L +CR + +++GK A+ LLEL+P
Sbjct: 824 DLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQSKDGDRIDLGKEASRMLLELEPQ 883
Query: 477 NPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPY 536
NP +YVL S+ YA+ G+W+ ++ R M ++K+ G SW+ VH F A D S P
Sbjct: 884 NPVNYVLASNFYAATGRWEDTAKARAAMGGAAMKKEAGQSWVTLGDGVHTFIAGDRSHPN 943
Query: 537 SDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGL 596
+ +IY +L L +K+ GYVP L+D+E K ++L++HSEKLA+AF L +
Sbjct: 944 TKEIYEKLNFLIQKIKNAGYVPMTEFALYDLEEENKEELLSYHSEKLAVAFVLTRSSSDV 1003
Query: 597 PIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
PIR++KNLRVC DCH A +YIS+I R+I++RD++RFH F++G+CSCGD+W
Sbjct: 1004 PIRIMKNLRVCGDCHTAFRYISQIVCRQIILRDSIRFHHFEDGKCSCGDYW 1054
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 136/469 (28%), Positives = 233/469 (49%), Gaps = 41/469 (8%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRI---TFSTMLIMSSSRRCV 58
P D ++WN L+S +A G V ++ ML D R TF +++ +S C
Sbjct: 226 PVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITATSLSSCS 285
Query: 59 D-LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
+ Q+ +LK G S ++VGS LV +A+ G++ +AK F L E+N V N +I G
Sbjct: 286 SGVLDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVG 345
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
L+++ EE+ +F G +D ++ T + L A+ +F+
Sbjct: 346 LVKQHCSEEAVGIFMGTRDSFVVNTDTFVVLLS--------------------AVAEFSI 385
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIKYAESVFRTMA 236
GL+ G+++H I+R D + + + LV+MY KC +I A VFR +
Sbjct: 386 PE-----DGLM---RGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLC 437
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
++ VSW ++ QNG E A+ +C M++ I P +F S +SSCA+L L G Q
Sbjct: 438 ARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQ 497
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTA----LVSGYA 352
H ++ GL +VSNALV YG CG +S +FN M D VSW + +VS +A
Sbjct: 498 VHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHA 557
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
E++++F M+ GL P++VT + +LSA S ++E G+ +++K I +
Sbjct: 558 PTA---ESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIED-N 613
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
++ +++G ++ + + M DA+ W +++S +G+++
Sbjct: 614 AVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQ 662
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 208/420 (49%), Gaps = 47/420 (11%)
Query: 61 GRQIHGHILKFGFGSY-VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
GR++HGHIL+ G + + + LV+MYAK G I
Sbjct: 393 GREVHGHILRTGLIDLKIALSNGLVNMYAKCGAI-------------------------- 426
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+++ R+FR + +D +SW T+I+ L QNG A+ + MR ++ F S
Sbjct: 427 -----DKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAIS 481
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
L++C L L G+Q+H ++ + V +ALV MY C + + +F +MA +
Sbjct: 482 GLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHD 541
Query: 240 VVSWTAML-VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+VSW +++ V + + E+V++F NM R+G+ P+ T +++S+ + L+ LE G Q H
Sbjct: 542 IVSWNSIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVH 601
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN-VRDEVSWTALVSGYAKFGKA 357
L G I V NAL++ Y K G+++ +LF+ M+ RD VSW +++SGY G
Sbjct: 602 AVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHL 661
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH--- 414
ET+D M+ D T VL+AC+ +E+G + + +GIR +
Sbjct: 662 QETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERG-----MEMHAFGIRSQLESDVV 716
Query: 415 -YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL 473
+ ++D+ S+ GR++ A N M + W +++S HG +G+ A E E+
Sbjct: 717 VESALLDMYSKCGRIDYASKVFNSMS-QKNEFSWNSMISGYARHG---LGEKALEIFEEM 772
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 137/273 (50%), Gaps = 25/273 (9%)
Query: 185 GGLLALEEGKQ-----IHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
GLL G++ +H +++ ++F+ + LV++Y K + A VF M +N
Sbjct: 62 AGLLLPRRGEEAAPERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERN 121
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE---PDDFTLGSVISSCANLAS--LEEG 294
VSWT ++ GY +G ++EA ++F M G E P FT GSV+ +C + L
Sbjct: 122 AVSWTCLVSGYVLSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFA 181
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKC--GNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
Q HG T S TV NAL++ YG C G + ++F+ VRD ++W AL+S YA
Sbjct: 182 VQVHGLVSKTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYA 241
Query: 353 KFGKANETIDLFEKMLSHG----LKPDEVTLIGVLSACS----RAGLVEKGRHYFEIMVK 404
K G T LF ML L+P+E T +++A S +G++++ F ++K
Sbjct: 242 KKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQ---VFARVLK 298
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKS-FIN 436
++ + ++ +R G L+EAK FIN
Sbjct: 299 SGSSSDLYVG-SALVSAFARHGMLDEAKDIFIN 330
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/439 (22%), Positives = 201/439 (45%), Gaps = 46/439 (10%)
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
++H ++K G +F+ + LV++YAK + A++ FD + E+N V + +++G + G
Sbjct: 77 RLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSG 136
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
+ +E+ R+F+ M W E + R FTFGSVL
Sbjct: 137 ITDEAFRVFKAML------W--------------EGSEFSRPT--------PFTFGSVLR 168
Query: 183 AC--GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS--IKYAESVFRTMAWK 238
AC G L Q+H + + + N V +AL+ MY C A+ VF T +
Sbjct: 169 ACQDAGPDLLAFAVQVHGLVSKTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVR 228
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG----IEPDDFTLGSVISSCANLASLEEG 294
++++W A++ Y + G +F M + + P++ T GS+I++ +L+S G
Sbjct: 229 DLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITA-TSLSSCSSG 287
Query: 295 T--QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
Q R L +G S + V +ALV+ + + G ++++ +F + R+ V+ L+ G
Sbjct: 288 VLDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLV 347
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVE----KGRHYFEIMVKEYGI 408
K + E + +F + T + +LSA + + E +GR +++ I
Sbjct: 348 KQHCSEEAVGIFMGT-RDSFVVNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLI 406
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
++++ ++ G +++A S + ++ D + W T++S +G E G
Sbjct: 407 DLKIALSNGLVNMYAKCGAIDKA-SRVFRLLCARDRVSWNTIISVLDQNGFCE-GAMMNY 464
Query: 469 SLLELDPYNPASYVLLSSI 487
++ +P+++ +S +
Sbjct: 465 CMMRQGCISPSNFAAISGL 483
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 232/643 (36%), Positives = 332/643 (51%), Gaps = 66/643 (10%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLS-RITFSTMLIMSSSRRCVDLGRQIH 65
V +N+LI + DA+ ++ M G T+ L S+ + + LG QIH
Sbjct: 87 VCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSCSASKDLLLGLQIH 146
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
+ K V+V + MY+ R G E
Sbjct: 147 SAVAKLRLDRNVYVAHSAISMYS-------------------------------RCGRPE 175
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE-MRLEGLAMDQFTFGSVLTAC 184
++ R+F GM +D +SW MI G + GL AI++F++ + L+G D T +L A
Sbjct: 176 DAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAM 235
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G K I++ VF M +K ++SW
Sbjct: 236 GN---------------------------------AKPDDIRFVRRVFDNMQFKELISWN 262
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
AML Y N +AV++F M+++ +EPD TL +V+ C L++ G + H
Sbjct: 263 AMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRK 322
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
+ + + NAL+ Y CG ++D+ +F+ M+ RD +SWT+++S Y K G E +DLF
Sbjct: 323 NMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLF 382
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
EKML GL+PD + + VL+ACS AGL+ G+HYF+ M Y I P +HYTCM+D+L R
Sbjct: 383 EKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGR 442
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG + EA FI M P+ W LL +CRIH N++IG AA++L L P YVLL
Sbjct: 443 AGCINEAYDFITTMLIEPNERVWGALLQACRIHSNMDIGLVAADNLFSLVPEQTGYYVLL 502
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S++YA G+W V+ +R M KG++K PG S ++ +VH F D P S+ IY +L
Sbjct: 503 SNMYARAGRWADVTSVRSVMVNKGIKKFPGTSIVELGDQVHTFHIGDRCHPQSEMIYHKL 562
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
++L K+ GY P++ + LHDVE +K L+ HSEKLAIAF LL PG IRV NL
Sbjct: 563 DELLGKIRGMGYNPEVEATLHDVEEEDKEDHLSVHSEKLAIAFLLLNTSPGTIIRVTMNL 622
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R CSDCH A K IS IT REI+++D R H G CSCGD+W
Sbjct: 623 RTCSDCHLAAKLISIITCREIVLKDTNRIHHIVQGVCSCGDYW 665
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 145/330 (43%), Gaps = 38/330 (11%)
Query: 133 GMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM--DQFTFGSVLTACGGLLAL 190
G ++ + +I L + L R+A+ LF MR G A D +T+ L +C L
Sbjct: 80 GRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSCSASKDL 139
Query: 191 EEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGY 250
G QIH+ + + NV+V + + MY +C + A VF M ++VVSW AM+ G+
Sbjct: 140 LLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAGF 199
Query: 251 GQNGCSEEAVKIFCN-MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
+ G + A+++F + G PD T+ ++ + N
Sbjct: 200 ARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGN---------------------- 237
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
K +I R+F+ M ++ +SW A+++ YA + ++LF M
Sbjct: 238 -----------AKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEK 286
Query: 370 HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLE 429
++PD +TL VL C G+ EI +K + P ++D+ + G L+
Sbjct: 287 DEVEPDSITLATVLPPCGELSAFSVGKRIHEI-IKRKNMCPNLLLENALMDMYASCGCLK 345
Query: 430 EAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+A+ + M D I W +++S+ HG+
Sbjct: 346 DAREIFDLMS-ARDVISWTSIISAYGKHGH 374
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 11/221 (4%)
Query: 180 VLTACGGLLALEEGKQIHA---FIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT-- 234
+L AC L + HA ++ H L+ Y C ++ A +V +
Sbjct: 18 LLAACRAPAHLPSLRAAHARLLVLLHPSHPSAAHANVKLIQAYAACSALPLAHTVLESSS 77
Query: 235 ---MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE--PDDFTLGSVISSCANLA 289
+ V + ++ + +A+ +F +M+ G PD +T + SC+
Sbjct: 78 PDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSCSASK 137
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
L G Q H L + V+++ ++ Y +CG ED++R+F+ M RD VSW A+++
Sbjct: 138 DLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIA 197
Query: 350 GYAKFGKANETIDLFEK-MLSHGLKPDEVTLIGVLSACSRA 389
G+A+ G + I++F++ ++ G PD T+ G+L A A
Sbjct: 198 GFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGNA 238
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 122/285 (42%), Gaps = 65/285 (22%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M F + +SWN +++ +A++ AV+++ LM KD + S IT +T+L +
Sbjct: 253 MQFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDS-ITLATVLPPCGELSAFSV 311
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G++IH I + + + + L+DMYA G + DA+ FD + ++++
Sbjct: 312 GKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVI----------- 360
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SWT++I+ ++G REA+DLF +M +GL D F +V
Sbjct: 361 --------------------SWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAV 400
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L +GK H F M + I AE
Sbjct: 401 LAACSHAGLLADGK--HYFD----------------SMTSRYHIIPKAE----------- 431
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
+T M+ G+ GC EA M IEP++ G+++ +C
Sbjct: 432 -HYTCMVDLLGRAGCINEAYDFITTML---IEPNERVWGALLQAC 472
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/647 (35%), Positives = 349/647 (53%), Gaps = 68/647 (10%)
Query: 38 GNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAK 97
G L + +F +L S + G ++HG K FV + +DMYA G I A+
Sbjct: 107 GRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYAR 166
Query: 98 RGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLERE 157
FDE M +D ++W TMI + GL E
Sbjct: 167 NVFDE-------------------------------MSHRDVVTWNTMIERYCRFGLVDE 195
Query: 158 AIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHK----------- 206
A LF EM+ + D+ ++++ACG + + I+ F+I ND +
Sbjct: 196 AFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVT 255
Query: 207 --------------------DNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
N+FV +A+V Y KC + A+ +F K++V WT M
Sbjct: 256 MYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTM 315
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ Y ++ +EA+++F M +GI+PD ++ SVIS+CANL L++ H V GL
Sbjct: 316 ISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGL 375
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
S ++++NAL+ Y KCG ++ + +F +M R+ VSW+++++ + G+A++ + LF +
Sbjct: 376 ESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFAR 435
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M ++P+EVT +GVL CS +GLVE+G+ F M EY I P +HY CM+D+ RA
Sbjct: 436 MKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRAN 495
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
L EA I MP + + W +L+S+CRIHG +E+GK+AA+ +LEL+P + + VL+S+
Sbjct: 496 LLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSN 555
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IYA + +W+ V +RR M EK V K+ G S I + H F D S++IYA+L++
Sbjct: 556 IYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDE 615
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP------IRV 600
+ K+ GYVPD SVL DVE EK ++ HSEKLA+ FGL+ IR+
Sbjct: 616 VVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRI 675
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VKNLRVC DCH K +SK+ +REI+VRD RFH +KNG CSC D+W
Sbjct: 676 VKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 175/352 (49%), Gaps = 33/352 (9%)
Query: 138 DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIH 197
+SI + + L ++ R I ++ +R G +DQF+F +L A + AL EG ++H
Sbjct: 75 ESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELH 134
Query: 198 AFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSE 257
+ + FV + +DMY C I YA +VF M+ ++VV+W M+ Y + G +
Sbjct: 135 GVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVD 194
Query: 258 EAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH----------GRSLVTGLI 307
EA K+F M+ + + PD+ L +++S+C ++ + L+T L+
Sbjct: 195 EAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALV 254
Query: 308 SF---------------------ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTA 346
+ + VS A+V+ Y KCG ++D+ +F++ +D V WT
Sbjct: 255 TMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTT 314
Query: 347 LVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY 406
++S Y + E + +FE+M G+KPD V++ V+SAC+ G+++K + + +
Sbjct: 315 MISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAK-WVHSCIHVN 373
Query: 407 GIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
G+ +I++ ++ G L+ + KMP + + W++++++ +HG
Sbjct: 374 GLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMHG 424
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 65/127 (51%), Gaps = 3/127 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW+ +I+ + HG +DA+ ++ M ++ + + +TF +L S V+
Sbjct: 405 MPRRNVVSWSSMINALSMHGEASDALSLFARMKQENV-EPNEVTFVGVLYGCSHSGLVEE 463
Query: 61 GRQIHGHIL-KFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITGL 118
G++I + ++ + +VD++ + L+ +A + +P N+V++ ++++
Sbjct: 464 GKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSAC 523
Query: 119 LRRGLVE 125
G +E
Sbjct: 524 RIHGELE 530
>gi|326507562|dbj|BAK03174.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/614 (36%), Positives = 333/614 (54%), Gaps = 42/614 (6%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGF-----GSYVFVGSPLVDMYAKLGLIYDAKR 98
T + +L+ S+ R + G+Q+HGH+LK G S+ + L+ YA+ L + R
Sbjct: 17 TLAELLVALSAARALPKGQQLHGHLLKGGHLPAVASSHALLAHHLLTFYARCSLPELSLR 76
Query: 99 GFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREA 158
F +LP +W+++I+ QNGL A
Sbjct: 77 AFLDLP------------------------------ASPSPAAWSSLISSFAQNGLPAAA 106
Query: 159 IDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGK----QIHAFIIRNDHKDNVFVGSA 214
D FR M G+ + A +H + +VFVGSA
Sbjct: 107 FDAFRRMLAAGVPATDRSIPPAAKAVAAAADSSRPPLAPHALHGLASKTPFAGDVFVGSA 166
Query: 215 LVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD 274
++DMY KC ++ A VF M +NVVSW+A++ GY G A+ IF + ++ +
Sbjct: 167 VLDMYAKCGNLSDARRVFDEMPERNVVSWSALIGGYADAGMHPSALCIFRSALEEAVQVN 226
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN 334
DFT+ ++ CA E G Q H RS+ T L + V ++LV+ Y KCG ++ ++R+F+
Sbjct: 227 DFTVSCIVRVCAAATLFELGAQVHARSIKTALDASPFVGSSLVSLYSKCGLVDCAYRVFS 286
Query: 335 EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEK 394
R+ W A++ A+ G + + F KM G +P+ +T + +L+ACS AGLV++
Sbjct: 287 AAPERNLGIWNAVLIASAQHGHTSTAFERFTKMQHAGFRPNFITFLCLLTACSHAGLVDE 346
Query: 395 GRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF-PPDAIGWATLLSS 453
G+ YF +M KEY I P +HY M+D+L R GR+ EA I MP PPD++ W LL +
Sbjct: 347 GKRYFSLM-KEYRIEPEVEHYAAMVDLLGRVGRITEALDLIESMPMEPPDSV-WGALLMA 404
Query: 454 CRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDP 513
CR+ + + AA+ L E + +++LLSS YA+ G+ + R+ MR+ G+RK+
Sbjct: 405 CRMFKDADTAAIAAKRLFETGSRSSGAHMLLSSTYAAAGRHVDAALARKAMRDAGIRKET 464
Query: 514 GCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKI 573
G SW++ VH F ++ P S++IY LEK+ KM GYV D S+V+ DV+ EK
Sbjct: 465 GLSWLEAAGEVHTFVSNCRRHPRSNEIYNVLEKVGEKMAVAGYVADTSAVVKDVDRDEKC 524
Query: 574 KMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRF 633
L +HSE+LAIA GLL +P G+PIRV+KNLRVC DCHNA KY+SK T R +++RD RF
Sbjct: 525 ASLGYHSERLAIALGLLIVPEGVPIRVMKNLRVCDDCHNAVKYLSKCTGRVVVLRDNRRF 584
Query: 634 HLFKNGECSCGDFW 647
H F++G CSCGDFW
Sbjct: 585 HRFEDGLCSCGDFW 598
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 159/369 (43%), Gaps = 35/369 (9%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSR---ITFSTMLIMSSSRRCVDLGRQ 63
+W+ LIS A +G A + ML G+ R + + S R
Sbjct: 88 AAWSSLISSFAQNGLPAAAFDAFRRMLAAGVPATDRSIPPAAKAVAAAADSSRPPLAPHA 147
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
+HG K F VFVGS ++DMYAK G + DA+R FDE+PE+N+V
Sbjct: 148 LHGLASKTPFAGDVFVGSAVLDMYAKCGNLSDARRVFDEMPERNVV-------------- 193
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
SW+ +I G G+ A+ +FR E + ++ FT ++
Sbjct: 194 -----------------SWSALIGGYADAGMHPSALCIFRSALEEAVQVNDFTVSCIVRV 236
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C E G Q+HA I+ + FVGS+LV +Y KC + A VF +N+ W
Sbjct: 237 CAAATLFELGAQVHARSIKTALDASPFVGSSLVSLYSKCGLVDCAYRVFSAAPERNLGIW 296
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
A+L+ Q+G + A + F MQ G P+ T ++++C++ ++EG ++
Sbjct: 297 NAVLIASAQHGHTSTAFERFTKMQHAGFRPNFITFLCLLTACSHAGLVDEGKRYFSLMKE 356
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKANETID 362
+ + A+V G+ G I ++ L M + S W AL+ F A+
Sbjct: 357 YRIEPEVEHYAAMVDLLGRVGRITEALDLIESMPMEPPDSVWGALLMACRMFKDADTAAI 416
Query: 363 LFEKMLSHG 371
+++ G
Sbjct: 417 AAKRLFETG 425
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 111/250 (44%), Gaps = 33/250 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW+ LI G+A G A+ ++ L++ + ++ T S ++ + ++ +L
Sbjct: 187 MPERNVVSWSALIGGYADAGMHPSALCIFRSALEEAV-QVNDFTVSCIVRVCAAATLFEL 245
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+H +K + FVGS LV +Y+K GL+ A R F PE+N+ +
Sbjct: 246 GAQVHARSIKTALDASPFVGSSLVSLYSKCGLVDCAYRVFSAAPERNLGI---------- 295
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
W ++ Q+G A + F +M+ G + TF +
Sbjct: 296 ---------------------WNAVLIASAQHGHTSTAFERFTKMQHAGFRPNFITFLCL 334
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
LTAC ++EGK+ + + + V +A+VD+ + I A + +M +
Sbjct: 335 LTACSHAGLVDEGKRYFSLMKEYRIEPEVEHYAAMVDLLGRVGRITEALDLIESMPMEPP 394
Query: 241 VS-WTAMLVG 249
S W A+L+
Sbjct: 395 DSVWGALLMA 404
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/600 (36%), Positives = 347/600 (57%), Gaps = 33/600 (5%)
Query: 49 LIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNI 108
L++ + R + L Q+H H++ G+G F+ + L+++ G I
Sbjct: 17 LLLQAGPR-LKLLHQVHAHVIVSGYGCSRFLLTKLLNLACAAGSI--------------- 60
Query: 109 VMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQ-NGLEREAIDLFREMRL 167
+R++F + + DS +T++I + + ++ + M L
Sbjct: 61 ----------------SYTRQIFLIVPNPDSFLFTSLIRSTSKFHNFSVYSLYFYTRMVL 104
Query: 168 EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY 227
+A +TF SV+ +C L+AL G+ IH ++ N +V+V +AL+ Y KC +
Sbjct: 105 SNVAPSNYTFTSVIKSCADLVALRHGRIIHGHVLVNGFGSDVYVQTALMSFYGKCGVLCN 164
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN 287
A VF M ++VV+W +M+ GY QNG ++EA+++F M+ G+EP+ T SV+S+CA+
Sbjct: 165 ARKVFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAH 224
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
L + G H ++ GL + + +L+ Y +CGN+ + +F+ M R+ V+WTA+
Sbjct: 225 LGAFILGCWVHEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAM 284
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYG 407
+SGY G ++ ++LF +M +GL P+ +T + VLSAC+ AGLV +GR FE M +EY
Sbjct: 285 ISGYGTNGYGSQAVELFHEMRRNGLLPNSITFVAVLSACAHAGLVNEGRRVFESMREEYR 344
Query: 408 IRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAA 467
+ P +H+ C++D+L RAG L+EA +FI ++ P W +L +C++H N +G A
Sbjct: 345 LVPEVEHHVCLVDMLGRAGLLDEAYNFIKEIHEEPAPAIWTAMLGACKMHKNFGLGAQVA 404
Query: 468 ESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF 527
E L +P NPA YV+LS+IYA G+ D V +R M K ++K G S I + ++F
Sbjct: 405 EHRLASEPGNPAHYVILSNIYALAGRMDQVEMVRDNMIRKCLKKQVGYSTIDLDRKTYLF 464
Query: 528 SADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAF 587
S D S +++IY L++L RK + GYV SV+H++E E+ L +HSEKLAIAF
Sbjct: 465 SMGDKSHTETNEIYHYLDQLMRKCREAGYVTVSDSVMHELEEEEREYALGYHSEKLAIAF 524
Query: 588 GLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
GLL G IR+VKNLR+C DCH+A KYIS I+ REI+VRD +RFH FKNG CSC D+W
Sbjct: 525 GLLKTSRGTVIRIVKNLRMCEDCHSAIKYISVISNREIIVRDKLRFHHFKNGSCSCLDYW 584
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 167/316 (52%), Gaps = 38/316 (12%)
Query: 40 LSRITFSTMLIMSSSRRCVDL-----GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIY 94
LS + S S + C DL GR IHGH+L GFGS V+V + L+ Y K G++
Sbjct: 104 LSNVAPSNYTFTSVIKSCADLVALRHGRIIHGHVLVNGFGSDVYVQTALMSFYGKCGVLC 163
Query: 95 DAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGL 154
+A++ FD++ ++++V +N+MI+G + G +E+ RLF MK+
Sbjct: 164 NARKVFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEI----------------- 206
Query: 155 EREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSA 214
G+ + TF SVL+AC L A G +H + + N NV +G++
Sbjct: 207 --------------GVEPNSATFVSVLSACAHLGAFILGCWVHEYAVGNGLDLNVVLGTS 252
Query: 215 LVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD 274
L++MY +C ++ A VF +M +NVV+WTAM+ GYG NG +AV++F M+RNG+ P+
Sbjct: 253 LINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLLPN 312
Query: 275 DFTLGSVISSCANLASLEEGTQ-FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLF 333
T +V+S+CA+ + EG + F L+ + LV G+ G +++++
Sbjct: 313 SITFVAVLSACAHAGLVNEGRRVFESMREEYRLVPEVEHHVCLVDMLGRAGLLDEAYNFI 372
Query: 334 NEMNVRDEVS-WTALV 348
E++ + WTA++
Sbjct: 373 KEIHEEPAPAIWTAML 388
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 117/244 (47%), Gaps = 36/244 (14%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V+WN +ISG+ +G +A+++++ M + G+ + TF ++L + LG +H
Sbjct: 178 VTWNSMISGYEQNGFAKEAIRLFDRMKEIGV-EPNSATFVSVLSACAHLGAFILGCWVHE 236
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+ + G V +G+ L++MY R G V +
Sbjct: 237 YAVGNGLDLNVVLGTSLINMYT-------------------------------RCGNVSK 265
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+R +F MK+++ ++WT MI+G NG +A++LF EMR GL + TF +VL+AC
Sbjct: 266 AREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLLPNSITFVAVLSACAH 325
Query: 187 LLALEEGKQIHAFIIRNDHK--DNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS-W 243
+ EG+++ +R +++ V LVDM + + A + + + + + W
Sbjct: 326 AGLVNEGRRVFE-SMREEYRLVPEVEHHVCLVDMLGRAGLLDEAYNFIKEIHEEPAPAIW 384
Query: 244 TAML 247
TAML
Sbjct: 385 TAML 388
>gi|356496086|ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/600 (37%), Positives = 344/600 (57%), Gaps = 32/600 (5%)
Query: 51 MSSSRRCVDLG--RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNI 108
+S +RC + +++H HILK G F GS LV A
Sbjct: 35 LSLLKRCKSMEEFKKVHAHILKLGLFYDSFCGSNLVASCA-------------------- 74
Query: 109 VMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE 168
L R G +E + +FR +++ S + TMI G + + EA+ L+ EM
Sbjct: 75 ---------LSRWGSMEYACSIFRQIEEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLER 125
Query: 169 GLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYA 228
G+ D FT+ VL AC L+AL+EG QIHA + + +VFV + L+ MY KC +I++A
Sbjct: 126 GIEPDNFTYPFVLKACSLLVALKEGVQIHAHVFNAGLEVDVFVQNGLISMYGKCGAIEHA 185
Query: 229 ESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE-PDDFTLGSVISSCAN 287
VF M K+V SW++++ + E + + +M R G ++ L S +S+C +
Sbjct: 186 GVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSREGRHRAEESILVSALSACTH 245
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
L S G HG L + V +L+ Y KCG++E +F M ++ S+T +
Sbjct: 246 LGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRYSYTVM 305
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYG 407
++G A G+ E + +F ML GL PD+V +GVLSACS AGLV++G F M E+
Sbjct: 306 IAGLAIHGRGREALRVFSDMLEEGLTPDDVVYVGVLSACSHAGLVKEGFQCFNRMQFEHM 365
Query: 408 IRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAA 467
I+P HY CM+D++ RAG L+EA I MP P+ + W +LLS+C++H N+EIG+ AA
Sbjct: 366 IKPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIKPNDVVWRSLLSACKVHHNLEIGEIAA 425
Query: 468 ESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF 527
+++ +L+ +NP Y++L+++YA KW +V+++R M EK + + PG S ++ V+ F
Sbjct: 426 DNIFKLNKHNPGDYLVLANMYARAQKWANVARIRTEMVEKNLVQTPGFSLVEANRNVYKF 485
Query: 528 SADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAF 587
+ D S P + IY ++++ ++ EGY PDMS VL DV+ EK + L HHS+KLAIAF
Sbjct: 486 VSQDKSQPQCETIYDMIQQMEWQLKFEGYTPDMSQVLLDVDEDEKRQRLKHHSQKLAIAF 545
Query: 588 GLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
L+ G P+R+ +NLR+C+DCH TK+IS I +REI VRD+ RFH FK+G CSC D+W
Sbjct: 546 ALIQTSEGSPVRISRNLRMCNDCHTYTKFISVIYEREITVRDSNRFHHFKDGTCSCKDYW 605
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/507 (41%), Positives = 311/507 (61%), Gaps = 32/507 (6%)
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMY----CKCKSIKY- 227
D++TF SVL AC GL + EG+++H F+ + + N+FV ++LVD+Y C C + K
Sbjct: 126 DEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLF 185
Query: 228 --------------------------AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVK 261
A VF M KN+VSW+ M+ GY +N +A++
Sbjct: 186 DEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIE 245
Query: 262 IFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFY 320
+F MQ G + P+D TL SV+S+CA+L +L+ G H + + + NAL Y
Sbjct: 246 LFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMY 305
Query: 321 GKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLI 380
KCG + ++ +F+EM+ RD +SW+ ++ G A +G ANE + F +M+ GL+P++++ +
Sbjct: 306 AKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFM 365
Query: 381 GVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF 440
G+L+AC+ AGLV+KG YF++M + YGI P +HY C++D+LSRAGRL++A+S IN MP
Sbjct: 366 GLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPM 425
Query: 441 PPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQL 500
P+ I W LL CRI+ + E G+ +LELD + S V L+++YAS G+ D +
Sbjct: 426 QPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASC 485
Query: 501 RRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDM 560
R MR+ K PGCSWI+ + V+ F D S P S +IY+ + +L KM GY P
Sbjct: 486 RLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKT 545
Query: 561 SSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKI 620
V+H+++ EK L+ HSEKLA+AFGL+ G IR+VKNLRVC+DCH+A K ISKI
Sbjct: 546 DLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKI 605
Query: 621 TQREILVRDAVRFHLFKNGECSCGDFW 647
+REI+VRD RFH FK+G+CSC D+W
Sbjct: 606 VEREIVVRDRSRFHHFKDGKCSCNDYW 632
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/355 (32%), Positives = 205/355 (57%), Gaps = 6/355 (1%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYN--LMLKDGLGNLSRITFSTMLIMSSSRRCV 58
+ F + ++N L+ + H + + + +N L+L + N TF+++L + V
Sbjct: 85 LSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNA-PNPDEYTFTSVLKACAGLAQV 143
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G+++H + K+G S +FV + LVD+Y K+G A++ FDE+ +++V +NT+I+G
Sbjct: 144 LEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGY 203
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG-LAMDQFTF 177
G+V+++R +F GM +K+ +SW+TMI+G +N +AI+LFR+M+ EG LA + T
Sbjct: 204 CFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTL 263
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
SVL+AC L AL+ GK IH FI RN + +F+G+AL DMY KC + A+ VF M
Sbjct: 264 VSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHE 323
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ- 296
++V+SW+ +++G G + EA F M +G+EP+D + ++++C + +++G +
Sbjct: 324 RDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEY 383
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV-SWTALVSG 350
F V G+ I +V + G ++ + L N M ++ V W AL+ G
Sbjct: 384 FDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGG 438
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 145/316 (45%), Gaps = 39/316 (12%)
Query: 180 VLTACGGLLALEEGKQIHAFIIRND--HKDNVFVGSALVDMYCKCKSIKYAESVFRT-MA 236
+L C L++ + +I A II + D + + + +++++ +F ++
Sbjct: 27 LLLRCATQLSMRQLFEIQAQIIASPIPSIDPNIIAVKFIGVSSSHGNLRHSVLIFNHFLS 86
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCN--MQRNGIEPDDFTLGSVISSCANLASLEEG 294
+ N+ ++ A+L + Q+ + F N + N PD++T SV+ +CA LA + EG
Sbjct: 87 FPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEG 146
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL------- 347
+ H G S + V N+LV Y K G + +LF+EM VRD VSW L
Sbjct: 147 QKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFS 206
Query: 348 ------------------------VSGYAKFGKANETIDLFEKMLSH-GLKPDEVTLIGV 382
+SGYA+ K + I+LF +M GL P++VTL+ V
Sbjct: 207 GMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSV 266
Query: 383 LSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPP 442
LSAC+ G ++ G+ + ++ I + D+ ++ G + EAK ++M
Sbjct: 267 LSACAHLGALDLGK-WIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEM-HER 324
Query: 443 DAIGWATLLSSCRIHG 458
D I W+ ++ ++G
Sbjct: 325 DVISWSIIIMGLAMYG 340
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 263/690 (38%), Positives = 377/690 (54%), Gaps = 82/690 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTML-----IMSSSR 55
+P G + + +SGH + +AV Y ML G TF ++L ++
Sbjct: 15 IPHRRGRAASSSVSGHGA----EEAVAGYVRMLAGG-ARPDAYTFPSLLKAAAAARGAAV 69
Query: 56 RCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKN----IVMY 111
+G IH H++KFG S S L+ MYA G A+ + VM+
Sbjct: 70 AAASVGGAIHAHVVKFGMESNAHAASSLIVMYAARGDGAAARAVLEAACLATGGGAPVMW 129
Query: 112 NTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLA 171
N +I+G R G E S F D + + M T +
Sbjct: 130 NALISGHNRSGRFELSCCSF-----VDMVRASAMATAV---------------------- 162
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
T+ SVL+ACG L G Q+H ++ + + V +ALVDMY +C + A +
Sbjct: 163 ----TYVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVL 218
Query: 232 F-----RTMA-WKNVVS-------------------------WTAMLVGYGQNGCSEEAV 260
F R+MA W +V+S WTAM+ GY Q G +A+
Sbjct: 219 FEGMQMRSMASWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDAL 278
Query: 261 KIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ---FHGRSLVTGLISFITVSNALV 317
+ F MQ + D+FT+ SV+++CA L +LE G + GR G+ + V NAL+
Sbjct: 279 ETFRYMQICKVRADEFTMVSVVTACAQLGALETGEWARIYMGR---LGIKMDVFVGNALI 335
Query: 318 TFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEV 377
Y KCG+IE + +F +M+ RD+ +WTA++ G A G+ E ID+F +ML PDEV
Sbjct: 336 DMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEV 395
Query: 378 TLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINK 437
T +GVL+AC+ AGLV+KGR +F M + Y I P HY C+ID+L RAG+L+EA I+K
Sbjct: 396 TFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDTIDK 455
Query: 438 MPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHV 497
MP P++ W TLL+SCR++GN EIG+ AAE LLELDP N +Y+LLS++YA +W V
Sbjct: 456 MPMKPNSTIWGTLLASCRVYGNSEIGELAAERLLELDPDNSTAYILLSNMYAKSNRWKDV 515
Query: 498 SQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYV 557
++R+ + EKG++K+PGCS I+ +H F A D S P + +IY++LE + + GYV
Sbjct: 516 RRIRQIIMEKGIKKEPGCSMIEMNGIIHEFVAADRSHPMNKEIYSKLENVLTDLRNAGYV 575
Query: 558 PDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYI 617
PD++ VL +V EK K+L HSEKLA+ F LL + IR+VKNLR+C DCHNA K I
Sbjct: 576 PDVTEVLVEVTEEEKQKVLYWHSEKLAVTFALLTSESNVIIRIVKNLRMCLDCHNAIKLI 635
Query: 618 SKITQREILVRDAVRFHLFKNGECSCGDFW 647
SK+ RE++VRD RFH F++G CSC D+W
Sbjct: 636 SKLYGREVIVRDRTRFHHFRHGSCSCKDYW 665
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/593 (36%), Positives = 333/593 (56%), Gaps = 72/593 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGS--VNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCV 58
+P D S+N +++ A HG DA++ M D L+ +F++ L ++ + +
Sbjct: 109 IPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDF-VLNAYSFASALSACAAEKDL 167
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G Q+HG + + V +G+ LVDMYAK DA+R FD
Sbjct: 168 RTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFD----------------- 210
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
M +++ +SW ++IT QNG EA+ LF EM G D+ T
Sbjct: 211 --------------AMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLS 256
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKC--------------- 222
SV++AC GL A EG+Q+HA +++ D +D++ + +ALVDMY KC
Sbjct: 257 SVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPS 316
Query: 223 ----------------KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM 266
+++ A+ VF M KNV++W ++ Y QNG EEA+++F +
Sbjct: 317 RSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQL 376
Query: 267 QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI------SFITVSNALVTFY 320
+R+ I P +T G+V+++C N+A L+ G Q H L G S + V N+LV Y
Sbjct: 377 KRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMY 436
Query: 321 GKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLI 380
K G+I+D ++F M RD VSW A++ GYA+ G+A + + LFE+ML PD VT+I
Sbjct: 437 LKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMI 496
Query: 381 GVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPF 440
GVLSAC +GLV++GR +F M +++GI P DHYTCM+D+L RAG L+EA+ I MP
Sbjct: 497 GVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPT 556
Query: 441 PPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQL 500
PD++ WA+LL +CR+H NVE+G+ A L ELDP N YVLLS++YA GKW V ++
Sbjct: 557 EPDSVLWASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRV 616
Query: 501 RRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIK 553
RR+M+++GV K PGCSWI+ S++++F A D P ++I++ L + +M +
Sbjct: 617 RRSMKDRGVSKQPGCSWIEIGSKMNVFLARDNRHPCRNEIHSTLRIIQMEMCR 669
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 213/430 (49%), Gaps = 40/430 (9%)
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
R HG +LK F+ + LV YA+LG + +A+R FD +P +N YN +++ R
Sbjct: 36 ARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYAR 95
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLER--EAIDLFREMRLEGLAMDQFTFG 178
G +E+R LF + D D S+ ++ L ++G +A+ M + ++ ++F
Sbjct: 96 LGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFA 155
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
S L+AC L G+Q+H + R+ H D+V +G+ALVDMY KC+ A VF M +
Sbjct: 156 SALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPER 215
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
NVVSW +++ Y QNG EA+ +F M G PD+ TL SV+S+CA LA+ EG Q H
Sbjct: 216 NVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVH 275
Query: 299 GRSLVTG-LISFITVSNALVTFYGKCG-------------------------------NI 326
+ L + ++NALV Y KCG N+
Sbjct: 276 AHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANV 335
Query: 327 EDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSAC 386
ED+ +F++M ++ ++W L++ YA+ G+ E I LF ++ + P T VL+AC
Sbjct: 336 EDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNAC 395
Query: 387 SRAGLVEKGRHYFEIMVKE---YGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPFP 441
+++ G+ ++KE + P D + ++D+ + G +++ +M
Sbjct: 396 GNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMA-A 454
Query: 442 PDAIGWATLL 451
D + W ++
Sbjct: 455 RDNVSWNAMI 464
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
SL HG L + + + N LV+ Y + G + ++ R+F+ + +R+ S+ AL+S
Sbjct: 32 SLPGARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLS 91
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
YA+ G+ +E LFE + PD+ + V++A +R G
Sbjct: 92 AYARLGRPDEARALFEAIPD----PDQCSYNAVVAALARHG 128
>gi|2244842|emb|CAB10264.1| hypothetical protein [Arabidopsis thaliana]
gi|7268231|emb|CAB78527.1| hypothetical protein [Arabidopsis thaliana]
Length = 587
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 233/646 (36%), Positives = 342/646 (52%), Gaps = 77/646 (11%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P + VSW LISG A +G + A+ + M ++ + +L R G
Sbjct: 19 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREAVASL---------------RLPVTG 63
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+QIH +K G VFVG DMY K L DA++ FDE+PE+N+
Sbjct: 64 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLE------------ 111
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
+W I+ + +G REAI+ F E R + TF + L
Sbjct: 112 -------------------TWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFL 152
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
AC L L G Q+H ++R+ +V SI+ +E +F M KN V
Sbjct: 153 NACSDWLHLNLGMQLHGLVLRSGFDTDV--------------SIRSSEIIFTEMGTKNAV 198
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW +++ Y QN E+A ++ +++ +E DF + SV+S+CA +A LE G H +
Sbjct: 199 SWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHA 258
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ + I V +ALV YGKCG IEDS + F+EM ++ V+ +L+ GYA G+ + +
Sbjct: 259 VKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMAL 318
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
LFE+M G G VE G F+ M YGI P +HY+C++D+
Sbjct: 319 ALFEEMAPRG-----------------CGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDM 361
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASY 481
L RAG +E A FI KMP P W L ++CR+HG ++G AAE+L +LDP + ++
Sbjct: 362 LGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNH 421
Query: 482 VLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIY 541
VLLS+ +A+ G+W + +R ++ G++K G SWI K++VH F A D S + +I
Sbjct: 422 VLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQ 481
Query: 542 AELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVV 601
L KL +M GY PD+ L+D+E EK ++HHSEKLA+AFGLL +P +PIR+
Sbjct: 482 TTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRIT 541
Query: 602 KNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLR+C DCH+ K++S +REI+VRD RFH FK+G CSC D+W
Sbjct: 542 KNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 587
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 147/315 (46%), Gaps = 29/315 (9%)
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
E +R + R ++ +SWT++I+GL QNG A+ F EMR E +A +
Sbjct: 9 ESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREAVASLRLPV------- 61
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
GKQIHA ++ +VFVG + DMYCK + A +F + +N+ +W
Sbjct: 62 -------TGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWN 114
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
A + +G EA++ F +R P+ T + +++C++ L G Q HG L +
Sbjct: 115 AFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRS 174
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G + ++ I S +F EM ++ VSW +LV+ Y + + + L+
Sbjct: 175 GFDTDVS--------------IRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLY 220
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+ ++ + + VLSAC+ +E GR VK R I + ++D+ +
Sbjct: 221 LRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVG-SALVDMYGK 279
Query: 425 AGRLEEAKSFINKMP 439
G +E+++ ++MP
Sbjct: 280 CGCIEDSEQAFDEMP 294
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 14/170 (8%)
Query: 218 MYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFT 277
MY K + A V R +NVVSWT+++ G QNG A+ F M+R +
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREAV------ 54
Query: 278 LGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN 337
A+L G Q H ++ G I + V + Y K +D+ +LF+E+
Sbjct: 55 --------ASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 106
Query: 338 VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACS 387
R+ +W A +S G+ E I+ F + P+ +T L+ACS
Sbjct: 107 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACS 156
>gi|449450898|ref|XP_004143199.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Cucumis sativus]
Length = 603
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 228/600 (38%), Positives = 337/600 (56%), Gaps = 38/600 (6%)
Query: 55 RRCVDLGRQIHGH--ILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYN 112
R C DL I H LK GF + + L++ Y + I A + FDE+P N+
Sbjct: 35 RNCNDLISSISTHSIALKLGFLNNTVNVNHLINCYVRFRSIATAHQLFDEMPNPNV---- 90
Query: 113 TMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM 172
+SWT+++ G + NG A+ LF EM +
Sbjct: 91 ---------------------------VSWTSLMAGYVDNGQPSTALFLFGEMLRSPVVP 123
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
+ FTF + + AC L L G+ HA + + N+ V S+L+DMY KC + A VF
Sbjct: 124 NDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKARGVF 183
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE-PDDFTLGSVISSCANLASL 291
+M+ KN+VSWT+M+ Y QN +EA+K+F E P+ + L SVIS+CA+L L
Sbjct: 184 NSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLASVISACASLGRL 243
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
G HG ++ G S V++ LV Y KCG+++ S ++FN ++ + +T+++
Sbjct: 244 VSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPSVIPYTSMIVST 303
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
AK+G +++ LFE+M+ GLKP+ +TL+GVL ACS +GL +G +Y M ++YGI P
Sbjct: 304 AKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEGLYYLTSMYEKYGIMPE 363
Query: 412 HDHYTCMIDILSRAGRLEEAKSFINKMPFPPD--AIGWATLLSSCRIHGNVEIGKWAAES 469
HYTC++D+L+R G L++A M PD A+ W LLS+ R HG V+I A +
Sbjct: 364 TKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEACQQ 423
Query: 470 LLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSA 529
L+ + +YV LS++YAS G + +LR M+ GV K+PGCSWI+ K +IF A
Sbjct: 424 LVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVHKEPGCSWIEIKDSSYIFYA 483
Query: 530 DDWSS-PYSDQIYAELEKLNRKMIKEGYVPDMSS-VLHDVELSEKIKMLNHHSEKLAIAF 587
+ +S P D++ L +L++KM GYV V D+E + + + HSE+LA+ F
Sbjct: 484 GEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLALGF 543
Query: 588 GLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
GL+ IP GL IR++KNLR+CSDCH A K IS+I +RE +VRD RFH FKNG C+C FW
Sbjct: 544 GLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFKNGCCTCNGFW 603
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 191/434 (44%), Gaps = 70/434 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW L++G+ +G + A+ ++ ML+ + + TF+T + S +
Sbjct: 85 MPNPNVVSWTSLMAGYVDNGQPSTALFLFGEMLRSPVVP-NDFTFATAIKACSILSNLRH 143
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G H H+ FG+G + V S L+DMY K + A+ F+ + KNIV + +M
Sbjct: 144 GEMFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKARGVFNSMSCKNIVSWTSM------ 197
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAMDQFTFGS 179
I QN EA+ +FRE L + + S
Sbjct: 198 -------------------------IAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLAS 232
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
V++AC L L GK +H I + V S LVDMY KC S+ Y++ VF ++ +
Sbjct: 233 VISACASLGRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPS 292
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
V+ +T+M+V + G +++++F M R G++P+ TL V+ +C++ EG +
Sbjct: 293 VIPYTSMIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEGLYY-- 350
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
L + Y K G + ++ +T +V A+ G+ ++
Sbjct: 351 ----------------LTSMYEKYGIMPETKH------------YTCVVDMLARVGELDK 382
Query: 360 TIDLFEKMLSHGLKPDEVTLI--GVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
DL + M + PD+ L+ +LSA G V+ + +V R + Y
Sbjct: 383 AFDLAKSM---DVAPDDKALLWGALLSASRCHGRVDIAAEACQQLVNSN--RQVAGAYVT 437
Query: 418 MIDILSRAGRLEEA 431
+ ++ + AG +E+A
Sbjct: 438 LSNVYASAGDMEKA 451
>gi|222624541|gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
Length = 669
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/579 (38%), Positives = 310/579 (53%), Gaps = 65/579 (11%)
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
LGRQIH + G VFV + MYA+ G DA + F+E
Sbjct: 30 LGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEE----------------- 72
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAMDQFTFG 178
M+ +D +SW MI+G GL A+D+FRE+ L+ D T
Sbjct: 73 --------------MQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMA 118
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
S+L + G + + I + VF M +K
Sbjct: 119 SILPSMGK---------------------------------ARVEDIALLKGVFDEMRFK 145
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
++SW AML Y N EAV++F MQ++GIEPD TL +V+ SC +++L G + H
Sbjct: 146 GLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIH 205
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
+ S + + NAL+ Y CG ++++ +F+ M RD VSWT+++S Y + G
Sbjct: 206 EVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGR 265
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
E IDLFEKM GL+PD + + +L+ACS AGL++ G+HYF M E+ I P +HY CM
Sbjct: 266 EAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACM 325
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
+D+L RAG + EA FI MP P+ W LL +CRIH N++IG AA+SLL L P
Sbjct: 326 VDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQT 385
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
YVLLS+IYA G+W VS +R M KG++K PG S + RVH F D S P S
Sbjct: 386 GYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSK 445
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
IY +L +L R++ + GY P++ + LHDVE +K L+ HSEKLAIAF L+ PG PI
Sbjct: 446 MIYKKLSELLRRIREMGYNPEVEATLHDVEEEDKEGHLSVHSEKLAIAFLLINTNPGTPI 505
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFK 637
R+ NLR CSDCH+A K IS I REI+++D R H K
Sbjct: 506 RITMNLRTCSDCHHAAKLISTIAGREIILKDVNRIHYMK 544
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 121/278 (43%), Gaps = 36/278 (12%)
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
+C L G+QIH+ R NVFV + + MY +C A +F M +++VVS
Sbjct: 21 SCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVS 80
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
W AM+ G+ G A+ +F + +PD T+ S++ S A +E+ G
Sbjct: 81 WNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGK-ARVEDIALLKG-- 137
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+F+EM + +SW A+++ Y E +
Sbjct: 138 ------------------------------VFDEMRFKGLISWNAMLAVYTNNEMHVEAV 167
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
+LF +M G++PD VTL VL +C + G+ E++ + + ++D+
Sbjct: 168 ELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLE-NALMDM 226
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+ G L+EA+ + M D + W +++S+ HG+
Sbjct: 227 YANCGCLKEARDVFDSMG-TRDVVSWTSIISAYGRHGH 263
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 117/256 (45%), Gaps = 33/256 (12%)
Query: 267 QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
Q G+ P L SCA L G Q H + GL + V+++ ++ Y +CG
Sbjct: 4 QGPGLLPGPLHLPVGFKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRP 63
Query: 327 EDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS-HGLKPDEVTLIGVLSA 385
+D++++F EM RD VSW A++SG+A G +D+F ++++ KPD T+ +L +
Sbjct: 64 DDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPS 123
Query: 386 CSRA---------GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFIN 436
+A G+ ++ R F+ ++ + ++ + ++ + R++
Sbjct: 124 MGKARVEDIALLKGVFDEMR--FKGLISWNAMLAVYTNNEMHVEAVELFMRMQ------- 174
Query: 437 KMPFPPDAIGWATLLSSC----------RIHGNVEIGKWAAESLLE---LDPY-NPASYV 482
K PDA+ AT+L SC RIH ++ + + LLE +D Y N
Sbjct: 175 KDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLK 234
Query: 483 LLSSIYASKGKWDHVS 498
++ S G D VS
Sbjct: 235 EARDVFDSMGTRDVVS 250
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 108/249 (43%), Gaps = 34/249 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M F +SWN +++ + ++ +AV+++ M KDG+ +T +T+L + L
Sbjct: 142 MRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGI-EPDAVTLATVLPSCGEVSALSL 200
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G++IH I + S + + + L+DMYA G + +A+ FD + +++V + ++I+ R
Sbjct: 201 GKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGR 260
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G E AIDLF +M +GL D F ++
Sbjct: 261 HGHGRE-------------------------------AIDLFEKMCGQGLEPDSIAFVAI 289
Query: 181 LTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK- 238
L AC L+ GK + H + + +VD+ + I+ A M K
Sbjct: 290 LAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKP 349
Query: 239 NVVSWTAML 247
N W A+L
Sbjct: 350 NERVWGALL 358
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/483 (41%), Positives = 305/483 (63%), Gaps = 1/483 (0%)
Query: 166 RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSI 225
+L+ L D+ T S++ AC L LE GK +H++ +N+ V +A++DMYCKC I
Sbjct: 3 KLDNLRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDI 62
Query: 226 KYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC 285
+ A+ VF + K+V+SWT+ML G ++G +E++ +F MQ + IEPD+ TL V+S+C
Sbjct: 63 ESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSAC 122
Query: 286 ANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT 345
A +L++G H + + + ALV Y KCG+I+ + ++F M VR+ +W
Sbjct: 123 AQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWN 182
Query: 346 ALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE 405
A++ G A G + I LF++M L PD+VT I +L ACS AGLV++G F+ M +
Sbjct: 183 AMIGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNK 242
Query: 406 YGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKW 465
+ I P +HY C++D+L RA ++++A +FI MP +++ WATLL +CR G+ ++ +
Sbjct: 243 FQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEK 302
Query: 466 AAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVH 525
++EL+P + YV+LS++YA +WDH +LR+ M+ KG+ K PGCSWI+ +H
Sbjct: 303 IXRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIH 362
Query: 526 IFSADDWSSPYSDQIYAELEKLNRKM-IKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLA 584
F A D S ++QIYA +E++ R++ + G+VP ++VL D+E EK L HSEKLA
Sbjct: 363 QFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLA 422
Query: 585 IAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCG 644
IA GL+ P G PIR+VKNLRVC+DCH+ K SK+ REI+ RD RFH FK G CSC
Sbjct: 423 IALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCM 482
Query: 645 DFW 647
DFW
Sbjct: 483 DFW 485
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 150/286 (52%), Gaps = 12/286 (4%)
Query: 94 YDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNG 153
Y + G DE N+ + N ++ + +E ++ +F +++KD +SWT+M++GL ++G
Sbjct: 36 YSKELGLDE----NLSVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSG 91
Query: 154 LEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGS 213
+E++ LFR+M+L + D+ T VL+AC AL++GK IH I + + ++ + +
Sbjct: 92 YFQESLALFRKMQLHKIEPDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLET 151
Query: 214 ALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEP 273
ALVDMY KC SI A VFR M +NV +W AM+ G +G E+A+ +F M+ + + P
Sbjct: 152 ALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGLAMHGHGEDAISLFDQMEXDKLMP 211
Query: 274 DDFTLGSVISSCANLASLEEG-TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRL 332
DD T +++ +C++ ++EG F + + +V + ++D+
Sbjct: 212 DDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAF 271
Query: 333 FNEMNVR-DEVSWTALVSGYAKFGKANETIDLFEKMLSH--GLKPD 375
M ++ + V W L+ G DL EK+ L+PD
Sbjct: 272 IENMPIKANSVLWATLLGACRSGGH----FDLAEKIXRRVIELEPD 313
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 109/278 (39%), Gaps = 48/278 (17%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D +SW ++SG A G +++ ++ M + IT +L + +D G+ I
Sbjct: 76 DVLSWTSMLSGLAKSGYFQESLALFRKMQLHKI-EPDEITLVGVLSACAQTGALDQGKYI 134
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H I KF + + + LVDMYAK G I A + F + +N+ +N MI GL G
Sbjct: 135 HLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGLAMHGHG 194
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
E +AI LF +M + L D TF ++L AC
Sbjct: 195 E-------------------------------DAISLFDQMEXDKLMPDDVTFIALLCAC 223
Query: 185 G-------GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
GL + K R +H +VD+ C+ + + A + M
Sbjct: 224 SHAGLVDEGLAMFQAMKNKFQIEPRMEHY------GCVVDLLCRARKVDDALAFIENMPI 277
Query: 238 K-NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD 274
K N V W +L G + A KI + +EPD
Sbjct: 278 KANSVLWATLLGACRSGGHFDLAEKIXRRVIE--LEPD 313
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/575 (37%), Positives = 331/575 (57%), Gaps = 51/575 (8%)
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNG---LEREAIDLFREMRLEG-LAMDQFTFGS 179
++ +R +FR M + + W T++ L + L+ EA+ LF M +G + ++FTF S
Sbjct: 68 IDYARAVFRQMPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPS 127
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK---------------- 223
VL AC L EGKQIH I++ ++ FV S LV MY C
Sbjct: 128 VLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDF 187
Query: 224 -------------------------------SIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
IK A+++F M ++VVSW M+ GY Q
Sbjct: 188 DGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQ 247
Query: 253 NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITV 312
NG EA+ +F MQ + I+P+ TL SV+ + A + +LE G H + + +
Sbjct: 248 NGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVL 307
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGL 372
+ALV Y KCG+I+++ ++F + R+ ++W+A++ +A G+A + I F M G+
Sbjct: 308 GSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGV 367
Query: 373 KPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAK 432
P++V IG+LSACS AGLVE+GR +F MVK G++P +HY CM+D+L RAG LEEA+
Sbjct: 368 TPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAE 427
Query: 433 SFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKG 492
I MP PD + W LL +C++H N+++G+ AE+L+EL P++ SYV LS++YAS G
Sbjct: 428 ELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLG 487
Query: 493 KWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMI 552
W+ V+++R M+ +RKDPGCSWI+ +H F +D S + +I A L +++ K+
Sbjct: 488 NWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLR 547
Query: 553 KEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHN 612
GY P+ V + + E+ + L +HSEK+A+AFGL+ P P+++VKNLR+C DCH
Sbjct: 548 SNGYRPNTLEVFLNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIVKNLRICEDCHA 607
Query: 613 ATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ K IS I +R+I+VRD RFH F++G CSC D+W
Sbjct: 608 SLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDYW 642
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 124/371 (33%), Positives = 197/371 (53%), Gaps = 21/371 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGS---VNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRC 57
MP + WN ++ A ++A+ +++ ML DG +R TF ++L +
Sbjct: 78 MPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASR 137
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKR-------GFD-----ELPE 105
+ G+QIHG I+KFGF FV S LV MY ++ DA FD EL +
Sbjct: 138 LREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDK 197
Query: 106 K----NIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDL 161
+ N+V++N MI G +R G ++ ++ LF M + +SW MI+G QNG EAI+L
Sbjct: 198 RKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINL 257
Query: 162 FREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK 221
F+EM+ + + T SVL A + ALE GK IH + +N + + +GSALVDMY K
Sbjct: 258 FQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSK 317
Query: 222 CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
C SI A VF T+ +N ++W+A++ + +G +E+A+ F M + G+ P+D +
Sbjct: 318 CGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGI 377
Query: 282 ISSCANLASLEEGTQFHGRSL-VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR- 339
+S+C++ +EEG F + V GL I +V G+ G++E++ L M +
Sbjct: 378 LSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEP 437
Query: 340 DEVSWTALVSG 350
D+V W AL+
Sbjct: 438 DDVIWKALLGA 448
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/632 (35%), Positives = 350/632 (55%), Gaps = 74/632 (11%)
Query: 57 CVDLG--RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTM 114
C++L +QIHGH+L+ G ++ + L+ KLG+ D P
Sbjct: 60 CINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGV------PMDPYP---------- 103
Query: 115 ITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
RR+ ++ ++ WT +I G G EAI ++ MR E +
Sbjct: 104 -------------RRVIEPVQFRNPFLWTAVIRGYTIEGKFDEAIAMYGCMRKEEITPVS 150
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
FTF ++L ACG + L G+Q HA R V+VG+ ++DMY KC SI A VF
Sbjct: 151 FTFSALLKACGSMGDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCGSIVCARKVFDE 210
Query: 235 M------AW-------------------------KNVVSWTAMLVGYGQNGCSEEAVKIF 263
M +W K++V+WTAM+ G+ QN +EA++ F
Sbjct: 211 MPERDVISWTELIAAYARVGNMESAADLFESLPTKDMVAWTAMVTGFAQNAKPQEALEYF 270
Query: 264 CNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS------FITVSNALV 317
M+++GI D+ T+ IS+CA L + +++ R++ S + + +AL+
Sbjct: 271 DRMEKSGIRADEVTVAGYISACAQLGA----SKYADRAVQIAQKSGYSPSDHVVIGSALI 326
Query: 318 TFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH-GLKPDE 376
Y KCGN+E++ +F MN ++ S+++++ G A G+A E +DLF M++ +KP+
Sbjct: 327 DMYSKCGNVEEAVNVFVSMNNKNVFSYSSMILGLATHGRAQEALDLFHYMVTQTAIKPNT 386
Query: 377 VTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFIN 436
VT +G L+ACS +GLV++GR F M + +G+ P DHYTCM+D+L RAGRL+EA I
Sbjct: 387 VTFVGALTACSHSGLVDQGRQVFASMYQTFGVEPTRDHYTCMVDLLGRAGRLQEALELIK 446
Query: 437 KMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDH 496
M P W LL +CRIH N +I + AAE L EL+P +Y+LLS++Y+S G W
Sbjct: 447 TMSVEPHGGVWGALLGACRIHNNPDIAEIAAEHLFELEPDIIGNYILLSNVYSSAGDWGG 506
Query: 497 VSQLRRTMREKGVRKDPGCSWIKYKS-RVHIFSADDWSSPYSDQIYAELEKLNRKMIKEG 555
V +R+ ++EKG++K P SW+ K+ ++H F + + P S +I +LE+L ++ G
Sbjct: 507 VLSVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSKKIQDKLEELVERLTALG 566
Query: 556 YVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATK 615
Y PD+SSV +DV + K +L H+EKLA+AF LL I+++KNLR+C DCH +
Sbjct: 567 YQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNRDYTIKIMKNLRMCQDCHMFMR 626
Query: 616 YISKITQREILVRDAVRFHLFKNGECSCGDFW 647
S++T R I++RD +RFH F++G CSCGDFW
Sbjct: 627 LASEVTGRVIIMRDNMRFHHFRSGACSCGDFW 658
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 188/351 (53%), Gaps = 6/351 (1%)
Query: 3 FHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGR 62
F + W +I G+ G ++A+ +Y M K+ + +S TFS +L S ++LGR
Sbjct: 112 FRNPFLWTAVIRGYTIEGKFDEAIAMYGCMRKEEITPVS-FTFSALLKACGSMGDLNLGR 170
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
Q H + +V+VG+ ++DMY K G I A++ FDE+PE++++ + +I R G
Sbjct: 171 QFHAQTFRLRGFCFVYVGNTMIDMYVKCGSIVCARKVFDEMPERDVISWTELIAAYARVG 230
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
+E + LF + KD ++WT M+TG QN +EA++ F M G+ D+ T ++
Sbjct: 231 NMESAADLFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYIS 290
Query: 183 ACGGLLALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
AC L A + + ++ + D+V +GSAL+DMY KC +++ A +VF +M KNV
Sbjct: 291 ACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFVSMNNKNV 350
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
S+++M++G +G ++EA+ +F M + I+P+ T +++C++ +++G Q
Sbjct: 351 FSYSSMILGLATHGRAQEALDLFHYMVTQTAIKPNTVTFVGALTACSHSGLVDQGRQVFA 410
Query: 300 RSLVT-GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALV 348
T G+ +V G+ G ++++ L M+V W AL+
Sbjct: 411 SMYQTFGVEPTRDHYTCMVDLLGRAGRLQEALELIKTMSVEPHGGVWGALL 461
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 158/395 (40%), Gaps = 86/395 (21%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGL--GNLSRITFSTMLIMSSSRRCV 58
+P D V+W +++G A + +A++ ++ M K G+ ++ + + + +
Sbjct: 242 LPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYA 301
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
D QI + +V +GS L+DMY+K G + +A F + KN+ Y++MI GL
Sbjct: 302 DRAVQI-AQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFVSMNNKNVFSYSSMILGL 360
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
G +E+ LF M + +I T+ TF
Sbjct: 361 ATHGRAQEALDLFHYMVTQTAIKPNTV------------------------------TFV 390
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
LTAC +++G+Q+ A S+++T +
Sbjct: 391 GALTACSHSGLVDQGRQVFA-------------------------------SMYQTFGVE 419
Query: 239 NVVS-WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCA--NLASLEEGT 295
+T M+ G+ G +EA+++ M +EP G+++ +C N + E
Sbjct: 420 PTRDHYTCMVDLLGRAGRLQEALELIKTM---SVEPHGGVWGALLGACRIHNNPDIAEIA 476
Query: 296 QFHGRSLVTGLI-SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD--EVSWTALVSGYA 352
H L +I ++I +SN + + G G + +L E ++ VSW +G
Sbjct: 477 AEHLFELEPDIIGNYILLSN-VYSSAGDWGGVLSVRKLIKEKGLKKTPAVSWVVDKNGQM 535
Query: 353 -KF--GKANETI---------DLFEKMLSHGLKPD 375
KF G N + +L E++ + G +PD
Sbjct: 536 HKFFPGNLNHPMSKKIQDKLEELVERLTALGYQPD 570
>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Vitis vinifera]
gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/528 (39%), Positives = 319/528 (60%), Gaps = 2/528 (0%)
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G + +R+LF M W T++ G ++NG+ +A+ ++ +MR G+ D FTF V+
Sbjct: 83 GDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVI 142
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
AC L L G +H ++++ + V + L+ MY K + AE +F +M +++V
Sbjct: 143 KACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLV 202
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
+W A++ Q G S +A++ F M GI+PD T+ S +S+C +L LE G + + +
Sbjct: 203 AWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFA 262
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
G+ S I V NA + KCG+++ + LF+EM R+ +SW+ ++ GYA G++ + +
Sbjct: 263 REEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKAL 322
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK--EYGIRPIHDHYTCMI 419
LF +M + G++P+ VT + VLSACS G V +G YF M + + I+P +HY CM+
Sbjct: 323 ALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYACMV 382
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L R+G LEEA +FI MP D W LL +C IH N+++G+ A+ L EL P +
Sbjct: 383 DLLGRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIHQNIKLGQHVADLLFELAPEIAS 442
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+VLLS++YA+ G+W V ++R+ M++KG RK S +++ +HI D S P S
Sbjct: 443 YHVLLSNMYAAAGRWHCVEKVRQRMKKKGARKVAAYSSVEFNGEIHILYGGDKSHPQSAS 502
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
I A+LE L ++M GY+P+ SV HDVE EK L+ HSEKLAIAF L+ P PIR
Sbjct: 503 ILAKLEDLLKQMKSMGYIPETDSVFHDVEDEEKESTLSTHSEKLAIAFSLINGSPKFPIR 562
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V+KNLR+C DCH K +S+IT REI++RD RFH FKNG CSC DFW
Sbjct: 563 VMKNLRICGDCHTFCKLVSRITMREIIMRDKNRFHHFKNGICSCKDFW 610
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 190/417 (45%), Gaps = 58/417 (13%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL-----GRQ 63
WN ++ G+ +G + AV VY M G+ TF ++ + C +L G
Sbjct: 103 WNTIMKGYVKNGIPDKAVSVYGKMRHLGV-RPDPFTFPFVI-----KACAELAELWAGLG 156
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
+HGH++K G V + L+ MY K G + A+ F + E+++V +N +I +
Sbjct: 157 MHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLVAWNALIAVCV---- 212
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
Q G +A+ FREM + G+ D T S L+A
Sbjct: 213 ---------------------------QTGFSSKALQSFREMGMAGIKPDSVTIVSALSA 245
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
CG L LE G++I+ F N+ V +A +DM KC + A ++F M +NV+SW
Sbjct: 246 CGHLGCLETGEEIYEFAREEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISW 305
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ---FHGR 300
+ ++ GY NG SE+A+ +F M+ G++P+ T +V+S+C++ + EG Q F +
Sbjct: 306 STVIGGYAVNGESEKALALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQ 365
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYA-----KF 354
S + +V G+ G++E+++ M + D W AL+ A K
Sbjct: 366 SDDKNIQPRKEHYACMVDLLGRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIHQNIKL 425
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
G+ + LFE L+ + V L + +A R VEK R +K+ G R +
Sbjct: 426 GQHVADL-LFE--LAPEIASYHVLLSNMYAAAGRWHCVEKVRQR----MKKKGARKV 475
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 32/203 (15%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+WN LI+ G + A++ + M G+ S +T + L C++ G +I
Sbjct: 200 DLVAWNALIAVCVQTGFSSKALQSFREMGMAGIKPDS-VTIVSALSACGHLGCLETGEEI 258
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
+ + G S + V + +DM AK G + A FDE+P++N+
Sbjct: 259 YEFAREEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNV---------------- 302
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
ISW+T+I G NG +A+ LF M+ +G+ + TF +VL+AC
Sbjct: 303 ---------------ISWSTVIGGYAVNGESEKALALFSRMKNQGVQPNYVTFLAVLSAC 347
Query: 185 GGLLALEEGKQIHAFIIRNDHKD 207
+ EG Q F+ ++D K+
Sbjct: 348 SHTGRVNEGWQYFNFMAQSDDKN 370
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/553 (40%), Positives = 318/553 (57%), Gaps = 47/553 (8%)
Query: 96 AKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLE 155
A + FD++ + NIV++NTM G R + + R MIT
Sbjct: 80 AHQLFDQITQPNIVLFNTMARGYAR---LNDPLR---------------MITHF------ 115
Query: 156 REAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSAL 215
R + L +++ AL EGKQ+H F ++ DN++V L
Sbjct: 116 RRCLRLVSKVK----------------------ALAEGKQLHCFAVKLGVSDNMYVVPTL 153
Query: 216 VDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDD 275
++MY C I + VF + VV++ A+++ +N + EA+ +F +Q G++P D
Sbjct: 154 INMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFRELQEIGLKPTD 213
Query: 276 FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNE 335
T+ V+SSCA L SL+ G H G ++ V+ L+ Y KCG+++D+ +F +
Sbjct: 214 VTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRD 273
Query: 336 MNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG 395
M RD +W+A++ YA G + I + +M ++PDE+T +G+L ACS GLVE+G
Sbjct: 274 MPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEG 333
Query: 396 RHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCR 455
YF M EYGI P HY CM+D+L RAGRL+EA FI+++P P I W TLLS+C
Sbjct: 334 FEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSACS 393
Query: 456 IHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGC 515
HGNVE+GK E + ELD + YV+ S++ A GKWD V+ LR+TM +KG K PGC
Sbjct: 394 THGNVEMGKRVIERIFELDDSHGGDYVIFSNLCARYGKWDDVNHLRKTMIDKGAVKIPGC 453
Query: 516 SWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLH-DVELSEKIK 574
S I+ + VH F A + S ++ L++L +++ GYVPD S V + D+E EK
Sbjct: 454 SSIEVNNVVHEFFAGEGVHSTSTTLHRALDELVKELKSAGYVPDTSLVFYADMEDEEKEI 513
Query: 575 MLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFH 634
+L +HSEKLAI FGLL PPG IRVVKNLRVC DCHNA K+IS I R+I++RD RFH
Sbjct: 514 ILRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHNAAKFISLIFGRQIILRDVQRFH 573
Query: 635 LFKNGECSCGDFW 647
FK+G+CSCGD+W
Sbjct: 574 HFKDGKCSCGDYW 586
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 178/375 (47%), Gaps = 51/375 (13%)
Query: 50 IMSSSRRCVDL---------GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF 100
+++ RRC+ L G+Q+H +K G ++V L++MY G I ++R F
Sbjct: 111 MITHFRRCLRLVSKVKALAEGKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVF 170
Query: 101 DELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAID 160
D++ E +V YN +I L R N EA+
Sbjct: 171 DKIDEPCVVAYNAIIMSLAR-------------------------------NNRANEALA 199
Query: 161 LFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYC 220
LFRE++ GL T VL++C L +L+ G+ +H ++ + V V + L+DMY
Sbjct: 200 LFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYA 259
Query: 221 KCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGS 280
KC S+ A +VFR M ++ +W+A++V Y +G +A+ + M++ ++PD+ T
Sbjct: 260 KCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLG 319
Query: 281 VISSCANLASLEEGTQ-FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
++ +C++ +EEG + FHG + G++ I +V G+ G ++++++ +E+ ++
Sbjct: 320 ILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIK 379
Query: 340 -DEVSWTALVSGYAKFGKANETIDLFEKML----SHGLKPDEVTLIGVLSACSRAGLVEK 394
+ W L+S + G + E++ SHG D V + C+R G +
Sbjct: 380 PTPILWRTLLSACSTHGNVEMGKRVIERIFELDDSHG--GDYVIFSNL---CARYGKWDD 434
Query: 395 GRHYFEIMVKEYGIR 409
H + M+ + ++
Sbjct: 435 VNHLRKTMIDKGAVK 449
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 153/307 (49%), Gaps = 27/307 (8%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK----SIKYAESVFRTMAWKNVVSWT 244
L+E KQI A+ I+ ++++N V + ++ +C S+++A +F + N+V +
Sbjct: 38 TLKELKQIQAYTIKTNYQNNTNVITKFIN-FCTSNPTKASMEHAHQLFDQITQPNIVLFN 96
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
M GY + + +++ + +R + + + +L EG Q H ++
Sbjct: 97 TMARGYAR---LNDPLRMITHFRR------------CLRLVSKVKALAEGKQLHCFAVKL 141
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G+ + V L+ Y CG+I+ S R+F++++ V++ A++ A+ +ANE + LF
Sbjct: 142 GVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALF 201
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
++ GLKP +VT++ VLS+C+ G ++ GR E VK+YG T +ID+ ++
Sbjct: 202 RELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHE-YVKKYGFDRYVKVNTTLIDMYAK 260
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL--DPYNPASYV 482
G L++A + MP D W+ ++ + HG+ G A L E+ + P
Sbjct: 261 CGSLDDAVNVFRDMP-KRDTQAWSAIIVAYATHGD---GFQAISMLNEMKKEKVQPDEIT 316
Query: 483 LLSSIYA 489
L +YA
Sbjct: 317 FLGILYA 323
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 91/190 (47%), Gaps = 38/190 (20%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRR---CVDLGRQ 63
V++N +I A + N+A+ ++ + + GL + T TML++ SS +DLGR
Sbjct: 179 VAYNAIIMSLARNNRANEALALFRELQEIGL----KPTDVTMLVVLSSCALLGSLDLGRW 234
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
+H ++ K+GF YV V + L+DMYAK G + DA F ++P+
Sbjct: 235 MHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPK------------------ 276
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
+D+ +W+ +I +G +AI + EM+ E + D+ TF +L A
Sbjct: 277 -------------RDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGILYA 323
Query: 184 CGGLLALEEG 193
C +EEG
Sbjct: 324 CSHNGLVEEG 333
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 3/140 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D +W+ +I +A+HG A+ + N M K+ + ITF +L S V+
Sbjct: 274 MPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKV-QPDEITFLGILYACSHNGLVEE 332
Query: 61 GRQ-IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNI-VMYNTMITGL 118
G + HG ++G + +VD+ + G + +A + DELP K +++ T+++
Sbjct: 333 GFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSAC 392
Query: 119 LRRGLVEESRRLFRGMKDKD 138
G VE +R+ + + D
Sbjct: 393 STHGNVEMGKRVIERIFELD 412
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 239/673 (35%), Positives = 362/673 (53%), Gaps = 65/673 (9%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTML-IMSSSRRCVDLGRQIH 65
VSW LI G+A G +AV ++ M++ G+ R TM+ ++S+ + DL
Sbjct: 206 VSWTSLIGGYAKRGCYKEAVSLFFEMVEVGI----RPNSVTMVGVISACAKLQDLQ---- 257
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
+G + +L L E N +M N ++ ++ G ++
Sbjct: 258 -------------LGEQVCTCIGELEL------------EVNALMVNALVDMYMKCGAID 292
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
++R++F DK+ + + T+++ ++ GL RE + + EM G D+ T S ++AC
Sbjct: 293 KARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACS 352
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
L + GK H +++RN + V +A+++MY KC + A VF M K VSW +
Sbjct: 353 ELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNS 412
Query: 246 MLVGYGQNGCSE-------------------------------EAVKIFCNMQRNGIEPD 274
++ G+ +NG E EA+++F MQ GI D
Sbjct: 413 LIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITAD 472
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN 334
T+ V S+C L +L+ HG + + + ALV + +CG+ + + ++FN
Sbjct: 473 KVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFN 532
Query: 335 EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEK 394
+M RD +WTA + A G I+LF++ML G+KPD V + +L+A S GLVE+
Sbjct: 533 KMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQ 592
Query: 395 GRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
G H F M YGI P HY CM+D+L RAG L EA S IN M P+ + W +LL++C
Sbjct: 593 GWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAAC 652
Query: 455 RIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPG 514
R+H NV+I +AAE + ELDP +VLLS+IYAS G+WD V+++R ++EKG K PG
Sbjct: 653 RVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPG 712
Query: 515 CSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIK 574
S I+ ++ F+ D S P I L+++ ++ GYVPD+++VL DV EK
Sbjct: 713 SSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICCRLRDIGYVPDLTNVLLDVNEKEKEY 772
Query: 575 MLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFH 634
+L+ HSEKLAIAF L+ G+PIRV KNLR+CSDCH+ K +SK REI+VRD RFH
Sbjct: 773 LLSRHSEKLAIAFALISTGQGMPIRVAKNLRICSDCHSFAKLVSKSYSREIIVRDNNRFH 832
Query: 635 LFKNGECSCGDFW 647
F+ G CSCGD+W
Sbjct: 833 FFQQGFCSCGDYW 845
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 215/479 (44%), Gaps = 65/479 (13%)
Query: 12 LISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKF 71
LI G ++ G A+ V+ ++ G TF +L + + G Q+HG I+K
Sbjct: 110 LIRGFSACGLGYKAIVVFRQLMCMG-AVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKM 168
Query: 72 GFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLF 131
GF +FV + L+ Y + G I + RR+F
Sbjct: 169 GFERDMFVENSLIHFYGECGEI-------------------------------DCMRRVF 197
Query: 132 RGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALE 191
M +++ +SWT++I G + G +EA+ LF EM G+ + T V++AC L L+
Sbjct: 198 DKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQ 257
Query: 192 EGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYG 251
G+Q+ I + + N + +ALVDMY KC +I A +F KN+V + ++ Y
Sbjct: 258 LGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYV 317
Query: 252 QNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFIT 311
+ G + E + + M ++G PD T+ S +S+C+ L + G HG L GL +
Sbjct: 318 RQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDN 377
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA-------------- 357
V NA++ Y KCG E + R+F+ M + VSW +L++G+ + G
Sbjct: 378 VCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSD 437
Query: 358 -----------------NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
E I+LF M S G+ D+VT++GV SAC G ++ + +
Sbjct: 438 LVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAK-WIH 496
Query: 401 IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+K+ I T ++D+ +R G + A NKM D W + + + GN
Sbjct: 497 GYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKM-VKRDVSAWTAAIGAMAMEGN 554
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 190/371 (51%), Gaps = 5/371 (1%)
Query: 142 WTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFII 201
++++I G GL +AI +FR++ G D FTF VL+AC AL EG Q+H I+
Sbjct: 107 FSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIV 166
Query: 202 RNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVK 261
+ + ++FV ++L+ Y +C I VF M+ +NVVSWT+++ GY + GC +EAV
Sbjct: 167 KMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVS 226
Query: 262 IFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYG 321
+F M GI P+ T+ VIS+CA L L+ G Q L + NALV Y
Sbjct: 227 LFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYM 286
Query: 322 KCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIG 381
KCG I+ + ++F+E ++ V + ++S Y + G A E + + +ML HG +PD +T++
Sbjct: 287 KCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLS 346
Query: 382 VLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFP 441
+SACS V G+ + V G+ + +I++ + G+ E A ++M
Sbjct: 347 AVSACSELDDVSCGK-WCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRM-LN 404
Query: 442 PDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLR 501
+ W +L++ +G++E W S + + S+ + + + +L
Sbjct: 405 KTRVSWNSLIAGFVRNGDME-SAWKIFS--AMPDSDLVSWNTMIGALVQESMFKEAIELF 461
Query: 502 RTMREKGVRKD 512
R M+ +G+ D
Sbjct: 462 RVMQSEGITAD 472
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 165/330 (50%), Gaps = 24/330 (7%)
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC------KSIKYAESVFRTMAWKNVVS- 242
+ E KQ+H+ I +N + +L ++ C +S++YA+ N +
Sbjct: 46 MTELKQLHSQITKNGLNHHPL---SLTNLISSCTEMGTFESLEYAQKALELFIEDNGIMG 102
Query: 243 ----WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+++++ G+ G +A+ +F + G PD+FT V+S+C A+L EG Q H
Sbjct: 103 THYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVH 162
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
G + G + V N+L+ FYG+CG I+ R+F++M+ R+ VSWT+L+ GYAK G
Sbjct: 163 GAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYK 222
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
E + LF +M+ G++P+ VT++GV+SAC++ ++ G + E + +
Sbjct: 223 EAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTC-IGELELEVNALMVNAL 281
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
+D+ + G +++A+ ++ + + + T++S+ G +L+ P P
Sbjct: 282 VDMYMKCGAIDKARKIFDEC-VDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGP-RP 339
Query: 479 ASYVLLSSIYA-------SKGKWDHVSQLR 501
+LS++ A S GKW H LR
Sbjct: 340 DRITMLSAVSACSELDDVSCGKWCHGYVLR 369
>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Brachypodium distachyon]
Length = 849
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 233/645 (36%), Positives = 356/645 (55%), Gaps = 34/645 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLG-NLSRITFSTMLIMSSSRRCVDLGRQIH 65
VSWN+++ G+A +G A + M + G IT ++L + S + R++H
Sbjct: 235 VSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELH 294
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
+++ G L L D ++ N +I R G +
Sbjct: 295 AFVVRRG-----------------LHLTGD-------------MVPNALIAAYGRCGCLL 324
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAMDQFTFGSVLTAC 184
+ R+F G+ K SW +I QNG AI+LFREM G D F+ GS+L AC
Sbjct: 325 HACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLAC 384
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G L L GK H FI+RN + + F+ +L+ +Y +C A +F + K+ VSW
Sbjct: 385 GNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWN 444
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQ--RNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSL 302
M+ GY QNG E++++F MQ + G P S + +C+ L ++ G + H +L
Sbjct: 445 TMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMHCFAL 504
Query: 303 VTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETID 362
L +S++++ Y KCG+++D+ F+ + +D VSWT +++GYA G+ E +
Sbjct: 505 KADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVG 564
Query: 363 LFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDIL 422
L++KM G++PD T +G+L AC AG++E G +F+ M I +HY C+I +L
Sbjct: 565 LYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLCFFQEMRNLPKIEAKLEHYACVIGML 624
Query: 423 SRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYV 482
SRAGR +A + + MP PDA +++LS+C +HG VE+GK A+ LLEL+P+ YV
Sbjct: 625 SRAGRFADAVALMEVMPEEPDAKILSSVLSACHMHGEVELGKKVADKLLELEPHKAEHYV 684
Query: 483 LLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYA 542
L S++YA +WD + ++R+ +R+ GV K+PGCSWI +V+ F A + S P ++
Sbjct: 685 LASNMYAGSRQWDEMRKVRKMLRDAGVAKEPGCSWIDIAGKVYSFVAGENSLPEMHKVRK 744
Query: 543 ELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVK 602
L K+ GY PD + +LH++E EK++ L HSEK AIAFGLL +RV K
Sbjct: 745 MWYSLEEKIRAAGYAPDTTVMLHELEEEEKVEALRWHSEKQAIAFGLLRTAGPTKVRVFK 804
Query: 603 NLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
N+R+C DCHNA K ISK+ REI+VRD RFH F++G CSCGD+W
Sbjct: 805 NIRMCKDCHNAAKLISKVADREIVVRDKKRFHHFRDGLCSCGDYW 849
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 183/391 (46%), Gaps = 50/391 (12%)
Query: 8 SWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGH 67
WN L++ + G DA+ + +L G ++ F+ + S R D GRQ+H
Sbjct: 32 QWNGLLADLSRAGRHADALAILPRLLAASDG-VAPDRFTLPPALKSCRG--DDGRQVHAV 88
Query: 68 ILKFGFGSY-VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
K G FVG+ LV MY + G + DA+
Sbjct: 89 AAKLGLADGDPFVGNSLVSMYGRCGRVDDAE----------------------------- 119
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL----AMDQFTFGSVLT 182
++F GM ++ +SW ++ + R ++LFR+ LE L A D+ T +VL
Sbjct: 120 --KVFEGMAGRNLVSWNALMAAVAD---PRRGLELFRDC-LEDLGGTAAPDEATLVTVLP 173
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM---AWKN 239
C L E G+ +H +++ V + LVDMY KC + AE F A +N
Sbjct: 174 MCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRN 233
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQ--RNGIEPDDFTLGSVISSCANLASLEEGTQF 297
VVSW ML GY +NG + A + MQ G+ D+ T+ SV+ C+ L L + +
Sbjct: 234 VVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLREL 293
Query: 298 HGRSLVTGL-ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H + GL ++ V NAL+ YG+CG + + R+F+ + + SW AL+ +A+ G+
Sbjct: 294 HAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGE 353
Query: 357 ANETIDLFEKMLSH-GLKPDEVTLIGVLSAC 386
A+ I+LF +M + G KPD ++ +L AC
Sbjct: 354 ASAAIELFREMTNACGQKPDWFSIGSLLLAC 384
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 137/275 (49%), Gaps = 18/275 (6%)
Query: 141 SWTTMITGLMQNGLEREAIDLFREMRL--EGLAMDQFTFGSVLTACGGLLALEEGKQIHA 198
W ++ L + G +A+ + + +G+A D+FT L +C G ++G+Q+HA
Sbjct: 32 QWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRG----DDGRQVHA 87
Query: 199 FIIRNDHKD-NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSE 257
+ D + FVG++LV MY +C + AE VF MA +N+VSW A++
Sbjct: 88 VAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVAD---PR 144
Query: 258 EAVKIF--CNMQRNGIE-PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSN 314
+++F C G PD+ TL +V+ CA LA E G HG ++ +G + VSN
Sbjct: 145 RGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSN 204
Query: 315 ALVTFYGKCGNIEDSHRLFNEMNV---RDEVSWTALVSGYAKFGKANETIDLFEKML--S 369
LV Y KCG + D+ F E R+ VSW ++ GYA+ G+A L +M
Sbjct: 205 VLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEE 264
Query: 370 HGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
G+ DE+T++ VL CS + K R +V+
Sbjct: 265 RGVPADEITMLSVLPVCSGLPELAKLRELHAFVVR 299
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 90/190 (47%), Gaps = 32/190 (16%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNL-SRITFSTMLIMSSSRRCVDLGRQ 63
D VSWN +I+G++ +G ++++++ M G+ S + ++ L+ S V LG++
Sbjct: 439 DEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKE 498
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
+H LK F+ S ++DMY+K G + DA+ FD L K+ V + M
Sbjct: 499 MHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVM--------- 549
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
ITG NG +EA+ L+ +M EG+ D FT+ +L A
Sbjct: 550 ----------------------ITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMA 587
Query: 184 CGGLLALEEG 193
CG LE+G
Sbjct: 588 CGHAGMLEDG 597
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/557 (39%), Positives = 327/557 (58%), Gaps = 34/557 (6%)
Query: 95 DAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGL 154
DA+R FDE+P+ N V+ M +G +R LV S LFR M DS S
Sbjct: 2 DARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSAS------------- 48
Query: 155 EREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSA 214
+D E A+ F+ + + G +L HA I + + N V +
Sbjct: 49 ---VVD-------EAAALVAFSASARVPDRGVTASL------HALIAKIGFERNAGVVNT 92
Query: 215 LVDMYCK--CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR--NG 270
++D Y K + ++ A VF TM ++VVSW +M+ Y QNG S EA+ ++ M G
Sbjct: 93 MLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGG 151
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
I+ + L +V+ +CA+ +++ G H + + GL + V ++V Y KCG +E +
Sbjct: 152 IKCNAVALSAVLLACAHAGAIQTGKHIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMAS 211
Query: 331 RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
R F ++ ++ +SW+A+++GY G+ E +++F +M GL+P+ +T I VL+ACS AG
Sbjct: 212 RAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAG 271
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATL 450
L+++GR+++ M +E+GI +HY CM+D+L RAG L+EA S I +M PDA W L
Sbjct: 272 LLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGAL 331
Query: 451 LSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVR 510
LS+CRIH NVE+ + + + L ELD N YVLLS+IYA G W V ++R ++ + +
Sbjct: 332 LSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEAGMWKDVERIRLLVKTRRIE 391
Query: 511 KDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELS 570
K PG S + K ++++F D S P +IY+ LEKL +M + GYVP+ SVLHD++
Sbjct: 392 KPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEE 451
Query: 571 EKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDA 630
EK L HSEKLA+AF L+ P I ++KNLRVCSDCH A K+I+KIT+REI++RD
Sbjct: 452 EKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITEREIIIRDL 511
Query: 631 VRFHLFKNGECSCGDFW 647
RFH FK+G CSC D+W
Sbjct: 512 QRFHHFKDGLCSCRDYW 528
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 183/358 (51%), Gaps = 41/358 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + V + SG+ + V +++++ M+ ++ + ++ S+S R D
Sbjct: 10 IPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVD-EAAALVAFSASARVPDR 68
Query: 61 G--RQIHGHILKFGFGSYVFVGSPLVDMYAKLGL--IYDAKRGFDELPEKNIVMYNTMIT 116
G +H I K GF V + ++D YAK G + A++ FD + E+++V +N+MI
Sbjct: 69 GVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIA 127
Query: 117 GLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL--EGLAMDQ 174
L+ QNG+ EAI L+ +M G+ +
Sbjct: 128 -------------LY------------------AQNGMSAEAIGLYSKMLNVGGGIKCNA 156
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRT 234
+VL AC A++ GK IH ++R ++NV+VG+++VDMY KC ++ A FR
Sbjct: 157 VALSAVLLACAHAGAIQTGKHIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRK 216
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
+ KN++SW+AM+ GYG +G +EA++IF M+R+G+ P+ T SV+++C++ L+EG
Sbjct: 217 IKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEG 276
Query: 295 TQ-FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
++ G+ + + +V G+ G +++++ L EM V+ D W AL+S
Sbjct: 277 RYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSA 334
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 233/683 (34%), Positives = 360/683 (52%), Gaps = 69/683 (10%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P + + +N L+ + G + Y + G G RI+F +L S + G
Sbjct: 75 PLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVG-GRFDRISFPPILKAVSKVSALFEG 133
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
++HG K S FV + L+DMYA G I A+ FDE
Sbjct: 134 MELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDE------------------- 174
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
M +D ++W TMI + GL EA LF EM+ + D+ +++
Sbjct: 175 ------------MSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIV 222
Query: 182 TACGGLLALEEGKQIHAFIIRNDHK-------------------------------DNVF 210
+ACG + + I+ F+I ND + N+F
Sbjct: 223 SACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLF 282
Query: 211 VGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
V +A+V Y K + A +F K++V WT M+ Y ++ +EA+++F M +G
Sbjct: 283 VSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSG 342
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
I+PD T+ SVIS+C NL +L++ H + + GL S + + NAL+ Y KCG ++ +
Sbjct: 343 IKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAAR 402
Query: 331 RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
+F +M R+ VSW+++++ +A G+A++++ LF +M ++P+EVT +GVL CS +G
Sbjct: 403 DVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSG 462
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATL 450
LVE+G+ F M EY I P +HY CM+D+ RA L EA I MP P+ + W +L
Sbjct: 463 LVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSL 522
Query: 451 LSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVR 510
+S+CR+HG +E+G+ AA+ +L+L+P + + VL+S+IYA + +WD+V +R M +K V
Sbjct: 523 MSACRVHGELELGELAAKRILKLEPDHDGALVLMSNIYAREYRWDYVRIIRWIMEKKKVF 582
Query: 511 KDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELS 570
K+ G S I + H F D S++IY +L ++ K+ GYVPD SVL DVE
Sbjct: 583 KEKGLSRIDLNGKSHEFLIGDKRHKQSNEIYTKLYEVVSKLKLAGYVPDGGSVLVDVEEE 642
Query: 571 EKIKMLNHHSEKLAIAFGLLFIPPGLP------IRVVKNLRVCSDCHNATKYISKITQRE 624
EK ++ HSEKLA+ FGL+ IR+VKNLRVC DCH K +SK+ + E
Sbjct: 643 EKKDLVLWHSEKLALCFGLMNKEKEEEKGSCGVIRIVKNLRVCEDCHAFFKLVSKVYELE 702
Query: 625 ILVRDAVRFHLFKNGECSCGDFW 647
I+VRD RFH +K+G CSC D+W
Sbjct: 703 IIVRDRTRFHRYKDGLCSCRDYW 725
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 72/144 (50%), Gaps = 7/144 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW+ +I+ A HG +D++ ++ M ++ + + +TF +L S V+
Sbjct: 408 MPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENV-EPNEVTFVGVLYGCSHSGLVEE 466
Query: 61 GRQIHGHIL-KFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP-EKNIVMYNTMITGL 118
G++I + ++ + +VD++ + L+ +A + +P N+V++ ++++
Sbjct: 467 GKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSAC 526
Query: 119 LRRGLVE----ESRRLFRGMKDKD 138
G +E ++R+ + D D
Sbjct: 527 RVHGELELGELAAKRILKLEPDHD 550
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/618 (35%), Positives = 352/618 (56%), Gaps = 42/618 (6%)
Query: 23 NDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSP 82
++ V++ M GL S + + + + +G+QIH G FV
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHV-LPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGS 156
Query: 83 LVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMK----DKD 138
+ MY + G + DA++ FD + +K++V + ++ R+G +EE R+ M+ + +
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 139 SISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHA 198
+SW +++G ++G +EA+ +F+++ G DQ T SVL + G L G+ IH
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHG 276
Query: 199 FIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF-------------------------- 232
++I+ + V SA++DMY K + S+F
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDK 336
Query: 233 ----------RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
+TM NVVSWT+++ G QNG EA+++F MQ G++P+ T+ S++
Sbjct: 337 ALEMFELFKEQTMEL-NVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
+C N+A+L G HG ++ L+ + V +AL+ Y KCG I S +FN M ++ V
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV 455
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
W +L++G++ GKA E + +FE ++ LKPD ++ +LSAC + GL ++G YF++M
Sbjct: 456 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Query: 403 VKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
+EYGI+P +HY+CM+++L RAG+L+EA I +MPF PD+ W LL+SCR+ NV++
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 575
Query: 463 GKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKS 522
+ AAE L L+P NP +YVLLS+IYA+KG W V +R M G++K+PGCSWI+ K+
Sbjct: 576 AEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKN 635
Query: 523 RVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEK 582
RV+ A D S P DQI ++++++++M K G+ P++ LHDVE E+ +ML HSEK
Sbjct: 636 RVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEK 695
Query: 583 LAIAFGLLFIPPGLPIRV 600
LA+ FGLL P G P++V
Sbjct: 696 LAVVFGLLNTPDGTPLQV 713
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 193/349 (55%), Gaps = 7/349 (2%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSWN ++SG G +AV ++ + G ++T S++L +++GR IHG
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCP-DQVTVSSVLPSVGDSEMLNMGRLIHG 276
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+++K G V S ++DMY K G +Y F++ + N ITGL R GLV++
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDK 336
Query: 127 SRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
+ +F K++ + +SWT++I G QNG + EA++LFREM++ G+ + T S+L
Sbjct: 337 ALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLP 396
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
ACG + AL G+ H F +R DNV VGSAL+DMY KC I ++ VF M KN+V
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVC 456
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHGRS 301
W +++ G+ +G ++E + IF ++ R ++PD + S++S+C + +EG + F S
Sbjct: 457 WNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMS 516
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVS 349
G+ + + +V G+ G +++++ L EM D W AL++
Sbjct: 517 EEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLN 565
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 114/479 (23%), Positives = 193/479 (40%), Gaps = 103/479 (21%)
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
Q H ILK G + ++ + L+ Y+ DA +P+ I ++++I L +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
L +S I +F M GL D ++
Sbjct: 96 LFTQS-------------------------------IGVFSRMFSHGLIPDSHVLPNLFK 124
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
C L A + GKQIH + + FV ++ MY +C + A VF M+ K+VV+
Sbjct: 125 VCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVT 184
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIE------------------------------ 272
+A+L Y + GC EE V+I M+ +GIE
Sbjct: 185 CSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIH 244
Query: 273 -----PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIE 327
PD T+ SV+ S + L G HG + GL+ V +A++ YGK G++
Sbjct: 245 HLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVY 304
Query: 328 DSHRLFNEMNVRDE-----------------------------------VSWTALVSGYA 352
LFN+ + + VSWT++++G A
Sbjct: 305 GIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCA 364
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
+ GK E ++LF +M G+KP+ VT+ +L AC + GR V+ + + +H
Sbjct: 365 QNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVH 424
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL 471
+ +ID+ ++ GR+ ++ N MP + + W +L++ +HG + ESL+
Sbjct: 425 VG-SALIDMYAKCGRINLSQIVFNMMP-TKNLVCWNSLMNGFSMHGKAKEVMSIFESLM 481
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 88/420 (20%), Positives = 176/420 (41%), Gaps = 61/420 (14%)
Query: 195 QIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNG 254
Q HA I+++ +++ ++ + L+ Y A+ V +++ + S+++++ +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 255 CSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSN 314
+++ +F M +G+ PD L ++ CA L++ + G Q H S V+GL V
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 315 ALVTFYGKCGNIEDSHRLFNEMNVRDE--------------------------------- 341
++ Y +CG + D+ ++F+ M+ +D
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 342 --VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
VSW ++SG+ + G E + +F+K+ G PD+VT+ VL + + ++ GR
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 400 EIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCR---I 456
++K+ G+ + MID+ ++G + S N+ + A + R +
Sbjct: 276 GYVIKQ-GLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 457 HGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKD---- 512
+E+ + E +EL N S+ + + A GK +L R M+ GV+ +
Sbjct: 335 DKALEMFELFKEQTMEL---NVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391
Query: 513 ----PGCSWIK----------YKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVP 558
P C I + RVH+ S D +YA+ ++N I +P
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALID-MYAKCGRINLSQIVFNMMP 450
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 68/167 (40%), Gaps = 2/167 (1%)
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
TQ H R L +G + +S L+ Y D+ + + S+++L+ K
Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKA 94
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
++I +F +M SHGL PD L + C+ + G+ + G+
Sbjct: 95 KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVS-GLDMDAFV 153
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
M + R GR+ +A+ ++M D + + LL + G +E
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMS-DKDVVTCSALLCAYARKGCLE 199
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/640 (35%), Positives = 352/640 (55%), Gaps = 41/640 (6%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
+N LI +S + +A+ +Y+ ML+ GL +T+ ++ + G +H H+
Sbjct: 163 YNSLIRALSSSKTPLEALPLYHTMLQSGL-KPDHMTYPFVIKACNESSVTWFGLLVHTHV 221
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+K GF ++ S L+ +YA + AK+ F+ +++V +N MI G ++ + +R
Sbjct: 222 VKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHAR 281
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
+F M +D ISW TMI G G EA LF EM
Sbjct: 282 MVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMP---------------------- 319
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
+ N+ ++++ + KC +++ A +F M ++VVSW +ML
Sbjct: 320 -----------------ERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLA 362
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
Y Q G EA+ +F M+ G++P + T+ S++S+CA+L +L++G H +
Sbjct: 363 CYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEV 422
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
V ALV Y KCG I + ++FN M +D ++W +++G A G E LF++M
Sbjct: 423 NSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMK 482
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
G++P+++T + +LSACS AG+V++G+ + M YGI P +HY C+ID+L+RAG L
Sbjct: 483 EAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFL 542
Query: 429 EEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIY 488
EEA I MP P+ LL CRIHGN E+G+ + L+ L P + Y+LLS+IY
Sbjct: 543 EEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIY 602
Query: 489 ASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLN 548
A+ KWD ++R M+ G+ K PG S I+ K VH F A DWS P S++IY +L +++
Sbjct: 603 AAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIH 662
Query: 549 RKMIKE-GYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVC 607
++ GY D +VL D+E +K L HSEKLAIA+GLL + IR+VKNLRVC
Sbjct: 663 TRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVC 722
Query: 608 SDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
DCH+ K ISK+ REI+VRD RFH F++GECSC DFW
Sbjct: 723 RDCHHVIKLISKVYGREIIVRDRNRFHHFEDGECSCLDFW 762
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 195/380 (51%), Gaps = 13/380 (3%)
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
++ +F +++ + ++I L + EA+ L+ M GL D T+ V+ AC
Sbjct: 148 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 207
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
G +H ++++ + + ++ S+L+ +Y K + A+ +F + ++VVSW AM
Sbjct: 208 SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAM 267
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ GY ++ A +F M + D + ++I+ A + ++E + L
Sbjct: 268 IDGYVKHVEMGHARMVFDRM----VCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNL 323
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+S+ N+++ + KCGN+ED+ LF+EM RD VSW ++++ YA+ GK NE + LF++
Sbjct: 324 VSW----NSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQ 379
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M + G+KP E T++ +LSAC+ G ++KG H + + I T ++D+ ++ G
Sbjct: 380 MRAVGVKPTEATVVSLLSACAHLGALDKGLH-LHTYINDNRIEVNSIVGTALVDMYAKCG 438
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLE--LDPYNPASYVLL 484
++ A N M D + W T+++ IHGNV+ + + + E ++P N ++V +
Sbjct: 439 KISLATQVFNAME-SKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEP-NDITFVAI 496
Query: 485 SSIYASKGKWDHVSQLRRTM 504
S + G D +L M
Sbjct: 497 LSACSHAGMVDEGQKLLDCM 516
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 89/169 (52%), Gaps = 5/169 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN +++ +A G N+A+ +++ M G+ + T ++L + +D
Sbjct: 349 MPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGV-KPTEATVVSLLSACAHLGALDK 407
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +H +I VG+ LVDMYAK G I A + F+ + K+++ +NT+I G+
Sbjct: 408 GLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAI 467
Query: 121 RGLVEESRRLFRGMK----DKDSISWTTMITGLMQNGLEREAIDLFREM 165
G V+E+++LF+ MK + + I++ +++ G+ E L M
Sbjct: 468 HGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCM 516
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 252/656 (38%), Positives = 353/656 (53%), Gaps = 64/656 (9%)
Query: 24 DAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPL 83
DAV Y ML G TF +L + R +H H++KFG G V + L
Sbjct: 26 DAVAGYARMLARG-AMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSL 84
Query: 84 VDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWT 143
V YA G A+ E V++N +I+G R RR
Sbjct: 85 VTAYAAGGDGAAARALLSERERDTPVVWNALISGHNR------CRRF------------- 125
Query: 144 TMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG-GLLALEEGKQIHAFIIR 202
EA F +M G A T+ SVL+ACG G + G Q+H ++
Sbjct: 126 ------------GEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVVG 173
Query: 203 NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM------AW------------------- 237
+ ++ V +ALVDMY +C ++ A +F M +W
Sbjct: 174 SGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDL 233
Query: 238 ------KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASL 291
++ VSWTAM+ GY Q EA+++F MQ + + D+FT+ SVI++CA L +L
Sbjct: 234 FGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGAL 293
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
E G G+ V NAL+ Y KCG+IE + +F +M+ RD+ +WTA++ G
Sbjct: 294 EMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGL 353
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
A G E I++F +M+ PDEVT IGVL+AC+ AGLV+KGR +F M + Y I P
Sbjct: 354 AVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPN 413
Query: 412 HDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL 471
HY C+ID+ RAG++ EA I++MP P++ W TLL++CR+HGN EIG+ E LL
Sbjct: 414 VVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVTERLL 473
Query: 472 ELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADD 531
++DP N Y LLS+IYA +W+ V +LR T+ EKG++K+PGCS I+ +H F A D
Sbjct: 474 QMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKGIKKEPGCSLIEMNGIIHEFVAGD 533
Query: 532 WSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLF 591
S P S +IY +LE + + GY PD++ V +V EK K+L HSEKLAIAF LL
Sbjct: 534 QSHPMSKEIYCKLESIINDLNNVGYFPDVTEVFVEVAEEEKQKVLFWHSEKLAIAFALLS 593
Query: 592 IPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
P IR+VKNLR+C DCHNA K IS++ RE++VRD RFH F++G CSC D+W
Sbjct: 594 SEPNTVIRIVKNLRMCLDCHNAIKLISRLYGREVVVRDRTRFHHFRHGFCSCKDYW 649
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 128/409 (31%), Positives = 216/409 (52%), Gaps = 12/409 (2%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V WN LISGH +A + M + G S + V LG Q+HG
Sbjct: 110 VVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHG 169
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++ G + V + LVDMYA+ + A + FD + +++V + ++++GL R G V+E
Sbjct: 170 RVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDE 229
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+R LF M ++D++SWT MI G +Q REA+++FREM+ ++ D+FT SV+TAC
Sbjct: 230 ARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQ 289
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L ALE G+ + ++ R K + FVG+AL+DMY KC SI+ A VF+ M ++ +WTA+
Sbjct: 290 LGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAI 349
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
++G NG EEA+++F M PD+ T V+++C + +++G +F T
Sbjct: 350 ILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYN 409
Query: 307 ISFITVS-NALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKANETIDLF 364
I+ V ++ +G+ G I ++ ++M + + W L++ G + +
Sbjct: 410 IAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVT 469
Query: 365 EKMLSHGLKPDEVTLIGVLS----ACSRAGLVEKGRHYFEIMVKEYGIR 409
E++L + P+ T+ +LS C+R V + RH + E GI+
Sbjct: 470 ERLLQ--MDPENSTVYTLLSNIYAKCNRWEDVRRLRH----TIMEKGIK 512
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 118/294 (40%), Gaps = 45/294 (15%)
Query: 257 EEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNAL 316
E+AV + M G PD +T ++ + A +S H + G+ V+ +L
Sbjct: 25 EDAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSL 84
Query: 317 VTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDE 376
VT Y G+ + L +E V W AL+SG+ + + E F M G P
Sbjct: 85 VTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTP 144
Query: 377 VTLIGVLSACSRA------GLVEKGR------------------HYFEIMVKEYG----- 407
VT + VLSAC + G+ GR Y E E
Sbjct: 145 VTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFD 204
Query: 408 ---IRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
+R + +T ++ L+R GR++EA+ +MP D + W + I G V+ +
Sbjct: 205 GMQVRSVVS-WTSLLSGLTRLGRVDEARDLFGRMP-ERDTVSWTAM-----IDGYVQAAR 257
Query: 465 W--AAESLLELDPYNPAS--YVLLSSIYASK--GKWDHVSQLRRTMREKGVRKD 512
+ A E E+ N ++ + ++S I A G + +R M +G++ D
Sbjct: 258 FREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMD 311
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/523 (39%), Positives = 310/523 (59%), Gaps = 2/523 (0%)
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
S ++F + + MI + + L+REMR G+ + + V+ +C
Sbjct: 121 SSQVFSQIMKPSGSQYNVMIRAYSMSHSPEQGFYLYREMRRRGVPPNPLSSSFVMKSCIR 180
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+ +L G QIHA I+R+ H+ + + + L+D+Y C + A VF + + VSW +
Sbjct: 181 ISSLMGGLQIHARILRDGHQSDNLLLTTLMDLYSCCDKFEEACKVFDEIPQWDTVSWNVL 240
Query: 247 LVGYGQNGCSEEAVKIFCNMQR--NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
+ N + +A+++F MQ +G EPDD T ++ +CANL +LE G + H
Sbjct: 241 ISCCIHNRRTRDALRMFDIMQSTADGFEPDDVTCLLLLQACANLGALEFGERVHNYIEEH 300
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G + + N+L+T Y +CG +E ++ +F M+ R+ VSW+A++SG+A G E I+ F
Sbjct: 301 GYDGALNLCNSLITMYSRCGRLEKAYSIFKRMDERNVVSWSAMISGFAMHGYGREAIEAF 360
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
E+M G+ PD+ TL GVLSACS GLV+ G +F+ M K +GI P HY CM+D+L R
Sbjct: 361 EQMQQLGVSPDDQTLTGVLSACSHCGLVDDGLMFFDRMSKVFGIEPNIHHYGCMVDLLGR 420
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG L++A I M PD+ W TLL +CRIH + +G+ L+EL YVLL
Sbjct: 421 AGLLDQAYQLIMSMVIKPDSTLWRTLLGACRIHRHATLGERVIGHLIELKAQEAGDYVLL 480
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
+IY+S G WD V+ LR+ M+EKG++ PGCS I+ K +VH F DD P +D+IY L
Sbjct: 481 LNIYSSVGNWDKVTDLRKFMKEKGIQTSPGCSTIELKGKVHEFVVDDILHPRTDEIYEML 540
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
+++ +++ GYV ++SS LH++ EK L++HSEKLAIAFG+L PPG IRV KNL
Sbjct: 541 DEIGKQLKIAGYVAELSSELHNLGAEEKGNRLSYHSEKLAIAFGVLATPPGTTIRVAKNL 600
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R+C DCHN K +S RE+++RD RFH F+ G+CSC +W
Sbjct: 601 RICVDCHNFAKVLSGAYNREVVIRDRTRFHHFREGQCSCNGYW 643
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 169/349 (48%), Gaps = 40/349 (11%)
Query: 6 GVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL--GRQ 63
G +N++I ++ S +Y M + G+ S+ +M S R L G Q
Sbjct: 133 GSQYNVMIRAYSMSHSPEQGFYLYREMRRRGV---PPNPLSSSFVMKSCIRISSLMGGLQ 189
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
IH IL+ G S + + L+D+Y+ +A + FDE+P+ + V
Sbjct: 190 IHARILRDGHQSDNLLLTTLMDLYSCCDKFEEACKVFDEIPQWDTV-------------- 235
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR--LEGLAMDQFTFGSVL 181
SW +I+ + N R+A+ +F M+ +G D T +L
Sbjct: 236 -----------------SWNVLISCCIHNRRTRDALRMFDIMQSTADGFEPDDVTCLLLL 278
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
AC L ALE G+++H +I + + + + ++L+ MY +C ++ A S+F+ M +NVV
Sbjct: 279 QACANLGALEFGERVHNYIEEHGYDGALNLCNSLITMYSRCGRLEKAYSIFKRMDERNVV 338
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR- 300
SW+AM+ G+ +G EA++ F MQ+ G+ PDD TL V+S+C++ +++G F R
Sbjct: 339 SWSAMISGFAMHGYGREAIEAFEQMQQLGVSPDDQTLTGVLSACSHCGLVDDGLMFFDRM 398
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALV 348
S V G+ I +V G+ G ++ +++L M ++ D W L+
Sbjct: 399 SKVFGIEPNIHHYGCMVDLLGRAGLLDQAYQLIMSMVIKPDSTLWRTLL 447
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 134/283 (47%), Gaps = 9/283 (3%)
Query: 195 QIHAFIIRNDHKDNVFVGSALVD--MYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
QIHA IIR N F+ + + + Y+ VF + + + M+ Y
Sbjct: 86 QIHAHIIRTSLIQNHFISLQFLSRAALSPSRDMGYSSQVFSQIMKPSGSQYNVMIRAYSM 145
Query: 253 NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITV 312
+ E+ ++ M+R G+ P+ + V+ SC ++SL G Q H R L G S +
Sbjct: 146 SHSPEQGFYLYREMRRRGVPPNPLSSSFVMKSCIRISSLMGGLQIHARILRDGHQSDNLL 205
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS--H 370
L+ Y C E++ ++F+E+ D VSW L+S + + + +F+ M S
Sbjct: 206 LTTLMDLYSCCDKFEEACKVFDEIPQWDTVSWNVLISCCIHNRRTRDALRMFDIMQSTAD 265
Query: 371 GLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEE 430
G +PD+VT + +L AC+ G +E G ++E+G + +I + SR GRLE+
Sbjct: 266 GFEPDDVTCLLLLQACANLGALEFGERVHN-YIEEHGYDGALNLCNSLITMYSRCGRLEK 324
Query: 431 AKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL 473
A S +M + + W+ ++S +HG G+ A E+ ++
Sbjct: 325 AYSIFKRMD-ERNVVSWSAMISGFAMHG---YGREAIEAFEQM 363
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 93/194 (47%), Gaps = 32/194 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLG-NLSRITFSTMLIMSSSRRCVD 59
+P D VSWN+LIS + DA++++++M G +T +L ++ ++
Sbjct: 229 IPQWDTVSWNVLISCCIHNRRTRDALRMFDIMQSTADGFEPDDVTCLLLLQACANLGALE 288
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G ++H +I + G+ + + + L+ MY++ G +
Sbjct: 289 FGERVHNYIEEHGYDGALNLCNSLITMYSRCGRL-------------------------- 322
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
E++ +F+ M +++ +SW+ MI+G +G REAI+ F +M+ G++ D T
Sbjct: 323 -----EKAYSIFKRMDERNVVSWSAMISGFAMHGYGREAIEAFEQMQQLGVSPDDQTLTG 377
Query: 180 VLTACGGLLALEEG 193
VL+AC +++G
Sbjct: 378 VLSACSHCGLVDDG 391
>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 238/689 (34%), Positives = 366/689 (53%), Gaps = 80/689 (11%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW L+SG+A +G ++ V+ ML DG+ + +L SS +
Sbjct: 302 DVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGI-QPDAVAVVKILAASSELGIFQQALCL 360
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG++++ GF S VFVG+ L+++Y+K G + DA +
Sbjct: 361 HGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVK-------------------------- 394
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM--RLEGLA-------MDQF 175
LF+GM +D + W++MI +G EA+++F +M ++G+ Q
Sbjct: 395 -----LFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQGITSCYQISMQPQV 449
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIR---------------------NDHKDNVFVGSA 214
+T+C LA ++ AF +R + K N+F
Sbjct: 450 QPPLAITSC--TLATHIPWKVKAFYMRAHFRWLGHFWEIFPTYPFQAADMSKSNIFAYGL 507
Query: 215 LVD---------MYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCN 265
D MY I A VF + W M+ G+ +G +++++
Sbjct: 508 QYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSK 567
Query: 266 MQRNGIEPDD-------FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVT 318
M G++PD+ ++ SV+ +C NL +L +G FH + TG I V+ A++
Sbjct: 568 MMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMD 627
Query: 319 FYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVT 378
Y KCG+++ + LF+E +D V W+A+++ Y G + IDLF++M+ G++P VT
Sbjct: 628 MYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVT 687
Query: 379 LIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
VLSACS +GL+E+G+ YF++M +E+ I +Y CM+D+L RAG+L EA I M
Sbjct: 688 FTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENM 747
Query: 439 PFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVS 498
P PDA W +LL +CRIH N+++ + A+ L LDP + +VLLS+IYA+K +W+ V
Sbjct: 748 PVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVE 807
Query: 499 QLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVP 558
++R+ M +G K G S ++Y ++VH F D S P +++YA+LE+L M GYVP
Sbjct: 808 KVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVP 867
Query: 559 DMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYIS 618
VLHD+E K L++HSE+LAIAFGL+ PG +R+ KNLR+C DCHNA K IS
Sbjct: 868 LTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLIS 927
Query: 619 KITQREILVRDAVRFHLFKNGECSCGDFW 647
KI R ILVRD RFH F++G CSCGD+W
Sbjct: 928 KIVNRVILVRDMHRFHRFEDGVCSCGDYW 956
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 182/398 (45%), Gaps = 72/398 (18%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN + + + +++++LM+ T L + R ++LG+ IHG
Sbjct: 70 WNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFA 129
Query: 69 LKFG-FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
K GS +FVGS LV++Y+K G + +A + F+E + V++ +M+TG + EE+
Sbjct: 130 KKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEA 189
Query: 128 ------------------------------------RRLFRGMKDKDSISWTTMITGLMQ 151
LF M +KD ISW+TMI
Sbjct: 190 LALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYAN 249
Query: 152 NGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFV 211
N EA++LF EM + + T S L AC LEEGK+IH
Sbjct: 250 NEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIH-------------- 295
Query: 212 GSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGI 271
+ WK+VVSW A+L GY QNG + +++ +F NM +GI
Sbjct: 296 ---------------------KIAVWKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGI 334
Query: 272 EPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHR 331
+PD + ++++ + L ++ HG + +G S + V +L+ Y KCG++ D+ +
Sbjct: 335 QPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVK 394
Query: 332 LFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
LF M VRD V W+++++ Y G+ E +++F++M+
Sbjct: 395 LFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQ 432
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 163/363 (44%), Gaps = 74/363 (20%)
Query: 51 MSSSRRCVDL------GR---QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFD 101
M S + VDL GR Q+H + K G F + L +YAK + A++ FD
Sbjct: 1 MRSRQVLVDLFQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFD 60
Query: 102 ELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDL 161
E P N+ ++N+ + R EE+ RLF M
Sbjct: 61 ETPHPNVHLWNSTLRSYCREKQWEETLRLFHLM--------------------------- 93
Query: 162 FREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYC 220
+ G A D FT L AC GL LE GK IH F +ND ++FVGSALV++Y
Sbjct: 94 ---ICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYS 150
Query: 221 KCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGS 280
KC + A VF + V WT+M+ GY QN EEA+ +F M
Sbjct: 151 KCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQM-------------- 196
Query: 281 VISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRD 340
V+ C F G + + N+L+ Y K G + + LF++M +D
Sbjct: 197 VMMDC-----------FDGD---------LPLVNSLLNLYAKTGCEKIAANLFSKMPEKD 236
Query: 341 EVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
+SW+ +++ YA ANE ++LF +M+ +P+ VT++ L AC+ + +E+G+ +
Sbjct: 237 VISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHK 296
Query: 401 IMV 403
I V
Sbjct: 297 IAV 299
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 199/430 (46%), Gaps = 52/430 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLK--DGLGNLSRITFSTMLIMSSSRRCV 58
M D V W+ +I+ + HG +A+++++ M++ G+ + +I+ + +
Sbjct: 399 MIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQGITSCYQISMQPQVQPPLAITSC 458
Query: 59 DLGRQIHGHILKFG--------------FGSYVFVGSPLV--DMYAKLGLIYDAKRGFDE 102
L I + F F +Y F + + +++A GL YD++
Sbjct: 459 TLATHIPWKVKAFYMRAHFRWLGHFWEIFPTYPFQAADMSKSNIFA-YGLQYDSR----- 512
Query: 103 LPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLF 162
+ K +MY + ++ + +F + + S W MI G +G +++L+
Sbjct: 513 ILTKFAIMYVSF-------NRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELY 565
Query: 163 REMRLEGLAMD-------QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSAL 215
+M +GL D + + SVL ACG L AL +G+ H+++I+ + ++ V +A+
Sbjct: 566 SKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAI 625
Query: 216 VDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDD 275
+DMY KC S+ A +F A K++V W+AM+ YG +G +A+ +F M + G+ P
Sbjct: 626 MDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSH 685
Query: 276 FTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSN--ALVTFYGKCGNIEDSHRLF 333
T V+S+C++ LEEG + + + + +SN +V G+ G + ++ L
Sbjct: 686 VTFTCVLSACSHSGLLEEGKMYF-QLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLI 744
Query: 334 NEMNVRDEVS-WTALVSGYAKFGKANETIDLFEKMLSHGLKPD------EVTLIGVLSAC 386
M V + S W +L+ + + +DL EK+ H D V L + +A
Sbjct: 745 ENMPVEPDASIWGSLLGA----CRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAK 800
Query: 387 SRAGLVEKGR 396
SR VEK R
Sbjct: 801 SRWNEVEKVR 810
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 14/324 (4%)
Query: 195 QIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNG 254
Q+H+ + + + F + L +Y KC S++ A VF NV W + L Y +
Sbjct: 22 QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81
Query: 255 CSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI-SFITV 312
EE +++F M G PD+FT+ + +CA L LE G HG + I S + V
Sbjct: 82 QWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFV 141
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGL 372
+ALV Y KCG + ++ ++F E D V WT++V+GY + E + LF +M+
Sbjct: 142 GSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDC 201
Query: 373 KPDEVTLIG-VLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEA 431
++ L+ +L+ ++ G + + F M ++ I ++ MI + EA
Sbjct: 202 FDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVIS-----WSTMIACYANNEAANEA 256
Query: 432 KSFINKM---PFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIY 488
+ ++M F P+++ + L +C + N+E GK + + D S+V L S Y
Sbjct: 257 LNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKD---VVSWVALLSGY 313
Query: 489 ASKGKWDHVSQLRRTMREKGVRKD 512
A G + R M G++ D
Sbjct: 314 AQNGMAYKSMGVFRNMLSDGIQPD 337
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 110/241 (45%), Gaps = 17/241 (7%)
Query: 277 TLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
L + +C N S+ +Q H + TG++ + L + Y KC +++ + ++F+E
Sbjct: 6 VLVDLFQACNNGRSV---SQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDET 62
Query: 337 NVRDEVSWTALVSGYAKFGKANETIDLFEKML-SHGLKPDEVTLIGVLSACSRAGLVEKG 395
+ W + + Y + + ET+ LF M+ + G PD T+ L AC+ ++E G
Sbjct: 63 PHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELG 122
Query: 396 R--HYFEIMVKEYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
+ H F E G D + + ++++ S+ G++ EA + PD + W +++
Sbjct: 123 KVIHGFAKKNDEIG----SDMFVGSALVELYSKCGQMGEALKVFEEFQ-RPDTVLWTSMV 177
Query: 452 SSCRIHGNVEIGKWAAESLLELDPYN---PASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
+ + + + E ++ +D ++ P LL ++YA G + L M EK
Sbjct: 178 TGYQQNNDPEEALALFSQMVMMDCFDGDLPLVNSLL-NLYAKTGCEKIAANLFSKMPEKD 236
Query: 509 V 509
V
Sbjct: 237 V 237
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 228/628 (36%), Positives = 344/628 (54%), Gaps = 68/628 (10%)
Query: 57 CVDLG--RQIHGHILKFGFGSYVFVGSPL----VDMYAKLGLIYDAKRGFDELPEKNIVM 110
C DL + IH ++++ VF S L VD + LI A R F ++ N+ +
Sbjct: 27 CSDLTHLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFI 86
Query: 111 YNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL 170
+N MI G G K+ D +A + + + +GL
Sbjct: 87 FNAMIRG-------------HSGSKNPD------------------QAFHFYVQSQRQGL 115
Query: 171 AMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYC---------- 220
D TF ++ +C L + G Q H II++ + +V+V ++LV MY
Sbjct: 116 LPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATL 175
Query: 221 ---------------------KCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEA 259
KC ++ A +F M KN+V+W+ M+ GY QN ++A
Sbjct: 176 IFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKA 235
Query: 260 VKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTF 319
V++F +Q G+ ++ + SVISSCA+L +LE G + H + G+ + + ALV
Sbjct: 236 VELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDM 295
Query: 320 YGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTL 379
Y +CG+I+ + +F ++ RD +SWTAL++G A G + ++ F M+ GL P ++T
Sbjct: 296 YARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITF 355
Query: 380 IGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP 439
VLSACS GLVE+G FE M +++ + P +HY CM+D+L RAG+LEEA+ F+ KMP
Sbjct: 356 TAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMP 415
Query: 440 FPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQ 499
P+A W LL +CRIH N EIG+ + L++L P + YVLLS+IYA+ +W+ V++
Sbjct: 416 VKPNAPVWGALLGACRIHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTE 475
Query: 500 LRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPD 559
+R+ M+ KG++K PG S I+ RVH F+ D S P D+I E++ ++ GY +
Sbjct: 476 MRQMMKAKGLKKPPGHSLIELDGRVHKFTIGDSSHPEMDKIERMWEEILMRIRAAGYRGN 535
Query: 560 MSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISK 619
+ L D++ EK L+ HSEKLAIAFG++ G PIR+VKNLRVC DCH ATK ISK
Sbjct: 536 TADALFDIDEEEKESALHRHSEKLAIAFGMMRSEAGTPIRIVKNLRVCEDCHTATKLISK 595
Query: 620 ITQREILVRDAVRFHLFKNGECSCGDFW 647
+ RE++VRD RFH F+ G CSC D+W
Sbjct: 596 VFGRELIVRDRNRFHHFRQGLCSCMDYW 623
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 195/362 (53%), Gaps = 4/362 (1%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
+N +I GH+ + + A Y + GL +TF ++ + C+ +G Q HGHI
Sbjct: 87 FNAMIRGHSGSKNPDQAFHFYVQSQRQGLLP-DNLTFPFLVKSCTKLHCISMGSQAHGHI 145
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+K GF V+V + LV MYA G A F + ++V + +MI G + G VE +R
Sbjct: 146 IKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESAR 205
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
+LF M +K+ ++W+TMI+G QN +A++LF+ ++ +G+ ++ SV+++C L
Sbjct: 206 KLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLG 265
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
ALE G++ H ++++N N+ +G+ALVDMY +C SI A VF + ++ +SWTA++
Sbjct: 266 ALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIA 325
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHGRSLVTGLI 307
G +G SE ++K F M G+ P D T +V+S+C++ +E G Q F +
Sbjct: 326 GLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVE 385
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKANETIDLFEK 366
+ +V G+ G +E++ R +M V+ W AL+ G + K E + K
Sbjct: 386 PRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALL-GACRIHKNAEIGERVGK 444
Query: 367 ML 368
+L
Sbjct: 445 IL 446
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 142/316 (44%), Gaps = 40/316 (12%)
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSAL----VDMYCKCKSIKYAESVFRTMA 236
L C L L K IHA++IR +VF S L VD I YA +F +
Sbjct: 24 LETCSDLTHL---KIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQ 80
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
N+ + AM+ G+ + ++A + QR G+ PD+ T ++ SC L + G+Q
Sbjct: 81 NPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQ 140
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTA---------- 346
HG + G + V N+LV Y G+ E + +F M D VSWT+
Sbjct: 141 AHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGD 200
Query: 347 ---------------------LVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
++SGYA+ ++ ++LF+ + S G++ +E ++ V+S+
Sbjct: 201 VESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISS 260
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
C+ G +E G + +VK G+ T ++D+ +R G +++A +P D +
Sbjct: 261 CAHLGALELGERAHDYVVKN-GMTLNLILGTALVDMYARCGSIDKAVWVFEDLP-ERDTL 318
Query: 446 GWATLLSSCRIHGNVE 461
W L++ +HG E
Sbjct: 319 SWTALIAGLAMHGYSE 334
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 118/237 (49%), Gaps = 18/237 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRR--CV 58
MP + V+W+ +ISG+A + + AV+++ ++ G+ + S ++SS +
Sbjct: 211 MPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVS---VISSCAHLGAL 267
Query: 59 DLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
+LG + H +++K G + +G+ LVDMYA+ G I A F++LPE++ + + +I GL
Sbjct: 268 ELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGL 327
Query: 119 LRRGLVEESRRLF-----RGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
G E S + F G+ +D I++T +++ GL +F M+ +
Sbjct: 328 AMHGYSERSLKYFATMVEAGLTPRD-ITFTAVLSACSHGGLVERGFQIFESMKRDHRVEP 386
Query: 174 QFT-FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
+ +G ++ G LEE ++ F+++ K N V AL+ C+ K AE
Sbjct: 387 RLEHYGCMVDLLGRAGKLEEAER---FVLKMPVKPNAPVWGALLG---ACRIHKNAE 437
>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
Length = 772
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 244/638 (38%), Positives = 364/638 (57%), Gaps = 42/638 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSWN +I+G +G +AV+ Y M + + S T + L +S + LG+QI
Sbjct: 99 DSVSWNSMITGLDQNGCFIEAVERYQSMRRHEILPGS-FTLISSLSSCASLKWAKLGQQI 157
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG LK G V V + L+ +YA+ G +
Sbjct: 158 HGESLKLGIDLNVSVSNALMTLYAETGYL------------------------------- 186
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLER---EAIDLFREMRLEGLAMDQFTFGSVL 181
E R++F M + D +SW ++I L + ER EA+ F G +++ TF SVL
Sbjct: 187 NECRKIFSSMPEHDQVSWNSIIGALASS--ERSLPEAVACFLNALRAGQKLNRITFSSVL 244
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA-WKNV 240
+A L E GKQIH ++ + D +AL+ Y KC + E +F M+ ++
Sbjct: 245 SAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDD 304
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+W +M+ GY N +A+ + M + G D F +V+S+ A++A+LE G + H
Sbjct: 305 VTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHAC 364
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
S+ L S + V +ALV Y KCG ++ + R FN M VR+ SW +++SGYA+ G+ E
Sbjct: 365 SVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEA 424
Query: 361 IDLFEKM-LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ LF M L PD VT +GVLSACS AGL+E+G +FE M YG+ P +H++CM
Sbjct: 425 LKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMA 484
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC-RIHG-NVEIGKWAAESLLELDPYN 477
D+L RAG L++ + FI+KMP P+ + W T+L +C R +G E+GK AAE L +L+P N
Sbjct: 485 DLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPEN 544
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
+YVLL ++YA+ G+W+ + + R+ M++ V+K+ G SW+ K VH+F A D S P +
Sbjct: 545 AVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDT 604
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFI-PPGL 596
D IY +L++LNRKM GYVP L+D+E K ++L++HSEKLA+AF L L
Sbjct: 605 DVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTL 664
Query: 597 PIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFH 634
PIR++KNLRVC DCH+A KYISKI R+I++RD+ R+
Sbjct: 665 PIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRYE 702
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 132/442 (29%), Positives = 215/442 (48%), Gaps = 55/442 (12%)
Query: 61 GRQIHGHILKFGFGSY-VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
GR++HGH++ G + V +G+ LV+MYAK G I DA
Sbjct: 52 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADA----------------------- 88
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
RR+F M +KDS+SW +MITGL QNG EA++ ++ MR + FT S
Sbjct: 89 --------RRVFCFMMEKDSVSWNSMITGLDQNGCFIEAVERYQSMRRHEILPGSFTLIS 140
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
L++C L + G+QIH ++ NV V +AL+ +Y + + +F +M +
Sbjct: 141 SLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHD 200
Query: 240 VVSWTAMLVGYGQNGCS-EEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
VSW +++ + S EAV F N R G + + T SV+S+ ++L+ E G Q H
Sbjct: 201 QVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIH 260
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALVSGYAKFGKA 357
G +L + T NAL+ YGKCG ++ ++F+ M+ RD+V+W +++SGY
Sbjct: 261 GLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELL 320
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY-- 415
+ +DL ML G + D VLSA + +E+G + V +R +
Sbjct: 321 AKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERG-----MEVHACSVRACLESDVV 375
Query: 416 --TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL--- 470
+ ++D+ S+ GRL+ A F N MP ++ W +++S HG E E+L
Sbjct: 376 VGSALVDMYSKCGRLDYALRFFNTMPV-RNSYSWNSMISGYARHGQGE------EALKLF 428
Query: 471 --LELDPYNPASYVLLSSIYAS 490
++LD P +V + ++
Sbjct: 429 ANMKLDGQTPPDHVTFVGVLSA 450
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 172/345 (49%), Gaps = 34/345 (9%)
Query: 1 MPFHDGVSWNLLISGHA-SHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
MP HD VSWN +I A S S+ +AV + L+ G L+RITFS++L SS +
Sbjct: 196 MPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAG-QKLNRITFSSVLSAVSSLSFGE 254
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
LG+QIHG LK+ + L+ Y K G + ++ F + E+
Sbjct: 255 LGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSER------------- 301
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+D ++W +MI+G + N L +A+DL M G +D F + +
Sbjct: 302 -----------------RDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYAT 344
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL+A + LE G ++HA +R + +V VGSALVDMY KC + YA F TM +N
Sbjct: 345 VLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRN 404
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEG-TQF 297
SW +M+ GY ++G EEA+K+F NM+ +G PD T V+S+C++ LEEG F
Sbjct: 405 SYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHF 464
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
S GL I + + G+ G ++ ++M V+ V
Sbjct: 465 ESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNV 509
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 143/267 (53%), Gaps = 3/267 (1%)
Query: 188 LALEEGKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
+ L++G+++H +I D V +G+ LV+MY KC SI A VF M K+ VSW +M
Sbjct: 47 VGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSM 106
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ G QNGC EAV+ + +M+R+ I P FTL S +SSCA+L + G Q HG SL G+
Sbjct: 107 ITGLDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGI 166
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA-NETIDLFE 365
++VSNAL+T Y + G + + ++F+ M D+VSW +++ A ++ E + F
Sbjct: 167 DLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFL 226
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
L G K + +T VLSA S E G+ + +K Y I +I +
Sbjct: 227 NALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALK-YNIADEATTENALIACYGKC 285
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLS 452
G ++ + ++M D + W +++S
Sbjct: 286 GEMDGCEKIFSRMSERRDDVTWNSMIS 312
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 7/212 (3%)
Query: 247 LVGYGQNGCSEEAVKIFCNMQRN-GIEPDDFT--LGSVIS-SCANLASLEEGTQFHGRSL 302
+VG + EEA K+F +M + P+ + L S S A L++G + HG +
Sbjct: 1 MVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEQVGLKKGREVHGHVI 60
Query: 303 VTGLISF-ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
TGL+ F + + N LV Y KCG+I D+ R+F M +D VSW ++++G + G E +
Sbjct: 61 TTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAV 120
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
+ ++ M H + P TLI LS+C+ + G+ +K GI ++ +
Sbjct: 121 ERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLK-LGIDLNVSVSNALMTL 179
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+ G L E + + MP D + W +++ +
Sbjct: 180 YAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 210
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + SWN +ISG+A HG +A+K++ M DG +TF +L S ++
Sbjct: 400 MPVRNSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEE 459
Query: 61 G-RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEK-NIVMYNTMITGL 118
G + +G + S + D+ + G + + D++P K N++++ T++
Sbjct: 460 GFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGAC 519
Query: 119 LR 120
R
Sbjct: 520 CR 521
>gi|302776458|ref|XP_002971391.1| hypothetical protein SELMODRAFT_95540 [Selaginella moellendorffii]
gi|300160523|gb|EFJ27140.1| hypothetical protein SELMODRAFT_95540 [Selaginella moellendorffii]
Length = 598
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/605 (36%), Positives = 344/605 (56%), Gaps = 36/605 (5%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
++ +L ++ R + G+++H H+ ++G+ + F+G+ LV MY K I DA FD +
Sbjct: 29 AYAALLRRCANERNLVDGKRVHEHLRRYGYENETFLGNLLVQMYGKCSSIDDAALAFDSI 88
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
+ KD SW MI +NG A+ +F
Sbjct: 89 -------------------------------RKKDLFSWNIMIAAFAENGCLDRAVGVFE 117
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
M + ++ TF +VL A L LE+GK+IH + + + N V +AL+ MY C
Sbjct: 118 LMEPARIKRNRGTFVAVLAAG---LDLEQGKKIHDSVHSSGLERNEMVATALLSMYGACG 174
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
S A VF + ++V W AM+ Y QN EA++IF ++ G++ ++ T + +
Sbjct: 175 STDDARQVFEQVPKLDLVCWNAMITAYVQNDRGREALEIFHRLEMEGVKCNEVTYLAALD 234
Query: 284 SCANLASLEEGTQFHGRSLVTGLI-SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
+CA LA EG H R GL+ + V+N+L+ YGK GN+E + +F M RD
Sbjct: 235 ACACLAVQSEGRSLHKRVSEAGLLLTSFKVANSLINMYGKSGNLEAAEEIFESMPSRDIS 294
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
SW L++ Y G + +D F + G +PD +T + VL ACS AGL++ G +
Sbjct: 295 SWNVLLTVYGHNGLGDLAVDRFTESCLEGFEPDSITFLAVLQACSHAGLLDTGVELLVSI 354
Query: 403 VKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
+++GI P HY C++D+L R+G L A++ IN MPF P+ W +LL CR++ +V
Sbjct: 355 QEDWGIDPTQYHYLCVVDLLGRSGELVRAEALINSMPFEPEEGAWRSLLGGCRVNSDVGR 414
Query: 463 GKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKS 522
G+ A + LL + + + YVL+++IYAS +D +LR M ++ V+K PG SWI+ +
Sbjct: 415 GERATQRLLVMSE-DSSPYVLMANIYASIRNFDLAERLRSVMADRNVKKQPGLSWIEVRG 473
Query: 523 RVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEK 582
R+H F+A+D ++IYA L++L ++ +EGY PD L+DVE +K++ML HHSEK
Sbjct: 474 RIHTFAANDKLHARKEEIYAGLDRLFVELQREGYRPDTRVALYDVEEEKKVRMLLHHSEK 533
Query: 583 LAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECS 642
LAI FGL+ P G P+ V+KNLRVC+DCH ATK I+KIT+R+I++RDA RFH F+NG+CS
Sbjct: 534 LAIMFGLMSTPDGSPLFVLKNLRVCADCHAATKIIAKITKRKIVMRDASRFHHFENGKCS 593
Query: 643 CGDFW 647
C D+W
Sbjct: 594 CCDYW 598
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.138 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,139,899,372
Number of Sequences: 23463169
Number of extensions: 416038684
Number of successful extensions: 1160564
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9382
Number of HSP's successfully gapped in prelim test: 2589
Number of HSP's that attempted gapping in prelim test: 945161
Number of HSP's gapped (non-prelim): 66417
length of query: 647
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 498
effective length of database: 8,863,183,186
effective search space: 4413865226628
effective search space used: 4413865226628
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)