BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006388
(647 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 920 bits (2379), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/647 (66%), Positives = 531/647 (82%), Gaps = 1/647 (0%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P DGV+WN+LI G++ G V AVK YN M++D NL+R+T TML +SSS V L
Sbjct: 98 LPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSL 157
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIHG ++K GF SY+ VGSPL+ MYA +G I DAK+ F L ++N VMYN+++ GLL
Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLA 217
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G++E++ +LFRGM +KDS+SW MI GL QNGL +EAI+ FREM+++GL MDQ+ FGSV
Sbjct: 218 CGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSV 276
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L ACGGL A+ EGKQIHA IIR + +D+++VGSAL+DMYCKCK + YA++VF M KNV
Sbjct: 277 LPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNV 336
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWTAM+VGYGQ G +EEAVKIF +MQR+GI+PD +TLG IS+CAN++SLEEG+QFHG+
Sbjct: 337 VSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGK 396
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ +GLI ++TVSN+LVT YGKCG+I+DS RLFNEMNVRD VSWTA+VS YA+FG+A ET
Sbjct: 397 AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVET 456
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
I LF+KM+ HGLKPD VTL GV+SACSRAGLVEKG+ YF++M EYGI P HY+CMID
Sbjct: 457 IQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMID 516
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+ SR+GRLEEA FIN MPFPPDAIGW TLLS+CR GN+EIGKWAAESL+ELDP++PA
Sbjct: 517 LFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAG 576
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
Y LLSSIYASKGKWD V+QLRR MREK V+K+PG SWIK+K ++H FSADD SSPY DQI
Sbjct: 577 YTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQI 636
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
YA+LE+LN K+I GY PD S V HDVE + K+KMLN+HSE+LAIAFGL+F+P G PIRV
Sbjct: 637 YAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRV 696
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCHNATK+IS +T REILVRDAVRFH FK+G CSCGDFW
Sbjct: 697 GKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 209/443 (47%), Gaps = 51/443 (11%)
Query: 55 RRCVDLG--------RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEK 106
++C+ LG + IHG+I++ F+ + +V YA + A+R FD +P+
Sbjct: 11 KQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQP 70
Query: 107 NIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR 166
N+ +N ++ + GL+ E F + D+D ++W +I G +GL A+ + M
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 167 LEGLA-MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK---- 221
+ A + + T ++L + GKQIH +I+ + + VGS L+ MY
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 222 ---------------------------CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNG 254
C I+ A +FR M K+ VSW AM+ G QNG
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNG 249
Query: 255 CSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSN 314
++EA++ F M+ G++ D + GSV+ +C L ++ EG Q H + T I V +
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 315 ALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKP 374
AL+ Y KC + + +F+ M ++ VSWTA+V GY + G+A E + +F M G+ P
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDP 369
Query: 375 DEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC----MIDILSRAGRLEE 430
D TL +SAC+ +E+G + + I HY ++ + + G +++
Sbjct: 370 DHYTLGQAISACANVSSLEEGSQFHGKAITSGLI-----HYVTVSNSLVTLYGKCGDIDD 424
Query: 431 AKSFINKMPFPPDAIGWATLLSS 453
+ N+M DA+ W ++S+
Sbjct: 425 STRLFNEMNV-RDAVSWTAMVSA 446
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 541 bits (1394), Expect = e-153, Method: Compositional matrix adjust.
Identities = 275/682 (40%), Positives = 426/682 (62%), Gaps = 36/682 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VSW +I G+ + G + A++V M+K+G+ ++ T + +L ++ RC++
Sbjct: 106 LPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGI-EPTQFTLTNVLASVAATRCMET 164
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+++H I+K G V V + L++MYAK G AK FD + ++I +N MI ++
Sbjct: 165 GKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQ 224
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAMDQFTFGS 179
G ++ + F M ++D ++W +MI+G Q G + A+D+F +M R L+ D+FT S
Sbjct: 225 VGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLAS 284
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIK------------- 226
VL+AC L L GKQIH+ I+ + V +AL+ MY +C ++
Sbjct: 285 VLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKD 344
Query: 227 --------------------YAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNM 266
A+++F ++ ++VV+WTAM+VGY Q+G EA+ +F +M
Sbjct: 345 LKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM 404
Query: 267 QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
G P+ +TL +++S ++LASL G Q HG ++ +G I ++VSNAL+T Y K GNI
Sbjct: 405 VGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNI 464
Query: 327 EDSHRLFNEMNV-RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
+ R F+ + RD VSWT+++ A+ G A E ++LFE ML GL+PD +T +GV SA
Sbjct: 465 TSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSA 524
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAI 445
C+ AGLV +GR YF++M I P HY CM+D+ RAG L+EA+ FI KMP PD +
Sbjct: 525 CTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVV 584
Query: 446 GWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMR 505
W +LLS+CR+H N+++GK AAE LL L+P N +Y L+++Y++ GKW+ +++R++M+
Sbjct: 585 TWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMK 644
Query: 506 EKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLH 565
+ V+K+ G SWI+ K +VH+F +D + P ++IY ++K+ ++ K GYVPD +SVLH
Sbjct: 645 DGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLH 704
Query: 566 DVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREI 625
D+E K ++L HHSEKLAIAFGL+ P +R++KNLRVC+DCH A K+ISK+ REI
Sbjct: 705 DLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREI 764
Query: 626 LVRDAVRFHLFKNGECSCGDFW 647
+VRD RFH FK+G CSC D+W
Sbjct: 765 IVRDTTRFHHFKDGFCSCRDYW 786
Score = 206 bits (523), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 133/473 (28%), Positives = 222/473 (46%), Gaps = 66/473 (13%)
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
+H ++K G V++ + L+++Y+K G A++ FDE+P + +NT+++ +RG
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
++ + F + +DS+SWTTMI G G +AI + +M EG+ QFT +VL +
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV------------ 231
+E GK++H+FI++ + NV V ++L++MY KC A+ V
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 232 -------------------FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-I 271
F MA +++V+W +M+ G+ Q G A+ IF M R+ +
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 272 EPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHR 331
PD FTL SV+S+CANL L G Q H + TG V NAL++ Y +CG +E + R
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 332 L---------------------------------FNEMNVRDEVSWTALVSGYAKFGKAN 358
L F + RD V+WTA++ GY + G
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYG 395
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
E I+LF M+ G +P+ TL +LS S + G+ VK I + +
Sbjct: 396 EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSV-SVSNAL 454
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL 471
I + ++AG + A + + D + W +++ + HG+ E E++L
Sbjct: 455 ITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETML 507
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 521 bits (1342), Expect = e-147, Method: Compositional matrix adjust.
Identities = 267/689 (38%), Positives = 407/689 (59%), Gaps = 56/689 (8%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTML-----IMSSSRRCVD 59
D V +N +I+G + + A+ ++ M +G TF+++L + ++CV
Sbjct: 112 DTVMYNAMITGFSHNNDGYSAINLFCKMKHEGF-KPDNFTFASVLAGLALVADDEKQCV- 169
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLG----LIYDAKRGFDELPEKNIVMYNTMI 115
Q H LK G G V + LV +Y+K L++ A++ FDE+ EK+ + TM+
Sbjct: 170 ---QFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMM 226
Query: 116 TGLLRRGLVEESRRLFRGMKDK-DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQ 174
TG ++ G + L GM D +++ MI+G + G +EA+++ R M G+ +D+
Sbjct: 227 TGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDE 286
Query: 175 FTFGSVLTACGGLLALEEGKQIHAFIIRND----HKDNVFVGSALVDMYCKCKSIKYAES 230
FT+ SV+ AC L+ GKQ+HA+++R + H DN +LV +Y KC A +
Sbjct: 287 FTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDN-----SLVSLYYKCGKFDEARA 341
Query: 231 VFRTMAWKNVVSWTAMLVGY-------------------------------GQNGCSEEA 259
+F M K++VSW A+L GY +NG EE
Sbjct: 342 IFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEG 401
Query: 260 VKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTF 319
+K+F M+R G EP D+ I SCA L + G Q+H + L G S ++ NAL+T
Sbjct: 402 LKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITM 461
Query: 320 YGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTL 379
Y KCG +E++ ++F M D VSW AL++ + G E +D++E+ML G++PD +TL
Sbjct: 462 YAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITL 521
Query: 380 IGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP 439
+ VL+ACS AGLV++GR YF+ M Y I P DHY +ID+L R+G+ +A+S I +P
Sbjct: 522 LTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLP 581
Query: 440 FPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQ 499
F P A W LLS CR+HGN+E+G AA+ L L P + +Y+LLS+++A+ G+W+ V++
Sbjct: 582 FKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVAR 641
Query: 500 LRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPD 559
+R+ MR++GV+K+ CSWI+ +++VH F DD S P ++ +Y L+ L ++M + GYVPD
Sbjct: 642 VRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPD 701
Query: 560 MSSVLHDVELS-EKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYIS 618
S VLHDVE K ML HSEK+A+AFGL+ +PPG IR+ KNLR C DCHN +++S
Sbjct: 702 TSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLS 761
Query: 619 KITQREILVRDAVRFHLFKNGECSCGDFW 647
+ QR+I++RD RFH F+NGECSCG+FW
Sbjct: 762 WVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 138/490 (28%), Positives = 219/490 (44%), Gaps = 75/490 (15%)
Query: 41 SRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF 100
+R + L + R + L R +HG+I+ FGF + + L+D+Y K + A++ F
Sbjct: 13 NRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLF 72
Query: 101 DELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKD--KDSISWTTMITGLMQNGLEREA 158
DE+ E + + TM++G G + +R +F +D++ + MITG N A
Sbjct: 73 DEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSA 132
Query: 159 IDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGK--QIHAFIIRNDHKDNVFVGSALV 216
I+LF +M+ EG D FTF SVL L+A +E + Q HA +++ V +ALV
Sbjct: 133 INLFCKMKHEGFKPDNFTFASVLAGL-ALVADDEKQCVQFHAAALKSGAGYITSVSNALV 191
Query: 217 DMYCKCKS----IKYAESVFRTMAWKNVVSWTAMLVGYGQN------------------- 253
+Y KC S + A VF + K+ SWT M+ GY +N
Sbjct: 192 SVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKL 251
Query: 254 -------------GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
G +EA+++ M +GIE D+FT SVI +CA L+ G Q H
Sbjct: 252 VAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAY 311
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY--------- 351
L SF N+LV+ Y KCG +++ +F +M +D VSW AL+SGY
Sbjct: 312 VLRREDFSF-HFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEA 370
Query: 352 ----------------------AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
A+ G E + LF M G +P + G + +C+
Sbjct: 371 KLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVL 430
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
G G+ Y ++K G +I + ++ G +EEA+ MP D++ W
Sbjct: 431 GAYCNGQQYHAQLLK-IGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNA 488
Query: 450 LLSSCRIHGN 459
L+++ HG+
Sbjct: 489 LIAALGQHGH 498
Score = 86.3 bits (212), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 120/287 (41%), Gaps = 75/287 (26%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLM---------------LKDGLGNLSRITF 45
MP D VSWN L+SG+ S G + +A ++ M ++G G F
Sbjct: 346 MPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLF 405
Query: 46 STM----------LIMSSSRRCVDL-----GRQIHGHILKFGFGSYVFVGSPLVDMYAKL 90
S M + + C L G+Q H +LK GF S + G+ L+ MYAK
Sbjct: 406 SCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKC 465
Query: 91 GLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLM 150
G++ +A++ F +P + V +N +I L
Sbjct: 466 GVVEEARQVFRTMPCLDSVSWN-------------------------------ALIAALG 494
Query: 151 QNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQ-------IHAFIIRN 203
Q+G EA+D++ EM +G+ D+ T +VLTAC +++G++ ++
Sbjct: 495 QHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGA 554
Query: 204 DHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS-WTAMLVG 249
DH + L+D+ C+ AESV ++ +K W A+L G
Sbjct: 555 DHY------ARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSG 595
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 90/215 (41%), Gaps = 35/215 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN LI+ HG +AV VY MLK G+ RIT T+L S VD
Sbjct: 478 MPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGI-RPDRITLLTVLTACSHAGLVDQ 536
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKL-------GLIYDAKRGFDELPEKNIV-MYN 112
GR+ F V+ P D YA+L G DA+ + LP K ++
Sbjct: 537 GRKY------FDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWE 590
Query: 113 TMITGLLRRGLVE----ESRRLFRGMKDKDSISWTTMITGLMQ--NGLEREAIDLFREMR 166
+++G G +E + +LF + + D T M+ M G E + + MR
Sbjct: 591 ALLSGCRVHGNMELGIIAADKLFGLIPEHDG---TYMLLSNMHAATGQWEEVARVRKLMR 647
Query: 167 LEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFII 201
G+ + AC +E Q+H F++
Sbjct: 648 DRGVKKE--------VACSW---IEMETQVHTFLV 671
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 509 bits (1312), Expect = e-143, Method: Compositional matrix adjust.
Identities = 255/641 (39%), Positives = 404/641 (63%), Gaps = 3/641 (0%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN + GHA A+K+Y M+ GL S TF +L + + G+QIHGH+
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNS-YTFPFVLKSCAKSKAFKEGQQIHGHV 160
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
LK G ++V + L+ MY + G + DA + FD+ P +++V Y +I G RG +E ++
Sbjct: 161 LKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQ 220
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
+LF + KD +SW MI+G + G +EA++LF++M + D+ T +V++AC
Sbjct: 221 KLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSG 280
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
++E G+Q+H +I + N+ + +AL+D+Y KC ++ A +F + +K+V+SW ++
Sbjct: 281 SIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIG 340
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG--RSLVTGL 306
GY +EA+ +F M R+G P+D T+ S++ +CA+L +++ G H + G+
Sbjct: 341 GYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGV 400
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
+ ++ +L+ Y KCG+IE +H++FN + + SW A++ G+A G+A+ + DLF +
Sbjct: 401 TNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSR 460
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M G++PD++T +G+LSACS +G+++ GRH F M ++Y + P +HY CMID+L +G
Sbjct: 461 MRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSG 520
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
+EA+ IN M PD + W +LL +C++HGNVE+G+ AE+L++++P NP SYVLLS+
Sbjct: 521 LFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSN 580
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IYAS G+W+ V++ R + +KG++K PGCS I+ S VH F D P + +IY LE+
Sbjct: 581 IYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEE 640
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
+ + K G+VPD S VL ++E K L HHSEKLAIAFGL+ PG + +VKNLRV
Sbjct: 641 MEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRV 700
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C +CH ATK ISKI +REI+ RD RFH F++G CSC D+W
Sbjct: 701 CRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 186/402 (46%), Gaps = 68/402 (16%)
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
+F+ +++ + + W TM G + A+ L+ M GL + +TF VL +C A
Sbjct: 90 VFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKA 149
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA---- 245
+EG+QIH +++ +++V ++L+ MY + ++ A VF ++VVS+TA
Sbjct: 150 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKG 209
Query: 246 ---------------------------MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTL 278
M+ GY + G +EA+++F +M + + PD+ T+
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
+V+S+CA S+E G Q H G S + + NAL+ Y KCG +E + LF +
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR-- 396
+D +SW L+ GY E + LF++ML G P++VT++ +L AC+ G ++ GR
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389
Query: 397 HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFIN-------------------- 436
H + I + G+ T +ID+ ++ G +E A N
Sbjct: 390 HVY-IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMH 448
Query: 437 --------------KMPFPPDAIGWATLLSSCRIHGNVEIGK 464
K+ PD I + LLS+C G +++G+
Sbjct: 449 GRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGR 490
Score = 146 bits (368), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 160/299 (53%), Gaps = 40/299 (13%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSS---RRC 57
+P D VSWN +ISG+A G+ +A++++ M+K + R STM+ + S+
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNV----RPDESTMVTVVSACAQSGS 281
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
++LGRQ+H I GFGS + + + L+D+Y+K G + A F+ LP K+++ +NT+I G
Sbjct: 282 IELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGG 341
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
+T M L +EA+ LF+EM G + T
Sbjct: 342 ------------------------YTHM-------NLYKEALLLFQEMLRSGETPNDVTM 370
Query: 178 GSVLTACGGLLALEEGKQIHAFIIR--NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
S+L AC L A++ G+ IH +I + + + ++L+DMY KC I+ A VF ++
Sbjct: 371 LSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 430
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
K++ SW AM+ G+ +G ++ + +F M++ GI+PDD T ++S+C++ L+ G
Sbjct: 431 LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLG 489
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 154/308 (50%), Gaps = 41/308 (13%)
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYC----KCKSIKYAESVFRT 234
S+L C L +L + IHA +I+ + + S L++ +C + + YA SVF+T
Sbjct: 38 SLLHNCKTLQSL---RIIHAQMIKIGLHNTNYALSKLIE-FCILSPHFEGLPYAISVFKT 93
Query: 235 MAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG 294
+ N++ W M G+ + A+K++ M G+ P+ +T V+ SCA + +EG
Sbjct: 94 IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEG 153
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL------- 347
Q HG L G + V +L++ Y + G +ED+H++F++ RD VS+TAL
Sbjct: 154 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213
Query: 348 ------------------------VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVL 383
+SGYA+ G E ++LF+ M+ ++PDE T++ V+
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273
Query: 384 SACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPD 443
SAC+++G +E GR + + ++G +ID+ S+ G LE A ++P+ D
Sbjct: 274 SACAQSGSIELGRQ-VHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY-KD 331
Query: 444 AIGWATLL 451
I W TL+
Sbjct: 332 VISWNTLI 339
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 7/171 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P+ D +SWN LI G+ +A+ ++ ML+ G + +T ++L + +D+
Sbjct: 327 LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG-ETPNDVTMLSILPACAHLGAIDI 385
Query: 61 GRQIHGHILKF--GFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
GR IH +I K G + + + L+DMYAK G I A + F+ + K++ +N MI G
Sbjct: 386 GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGF 445
Query: 119 LRRGLVEESRRLFRGMK----DKDSISWTTMITGLMQNGLEREAIDLFREM 165
G + S LF M+ D I++ +++ +G+ +FR M
Sbjct: 446 AMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTM 496
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 508 bits (1309), Expect = e-143, Method: Compositional matrix adjust.
Identities = 254/594 (42%), Positives = 374/594 (62%), Gaps = 7/594 (1%)
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKL---GLIYDAKRGFDELPEKNIVMYNTMI- 115
G +HG I++ G ++ G+ L++MYAKL G FDE+P++ + +
Sbjct: 123 FGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVK 182
Query: 116 --TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
T ++ G ++ RR+F M KD +S+ T+I G Q+G+ +A+ + REM L D
Sbjct: 183 AETCIMPFG-IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
FT SVL + + +GK+IH ++IR +V++GS+LVDMY K I+ +E VF
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 301
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE 293
+ ++ +SW +++ GY QNG EA+++F M ++P SVI +CA+LA+L
Sbjct: 302 RLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHL 361
Query: 294 GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK 353
G Q HG L G S I +++ALV Y KCGNI+ + ++F+ MNV DEVSWTA++ G+A
Sbjct: 362 GKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHAL 421
Query: 354 FGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
G +E + LFE+M G+KP++V + VL+ACS GLV++ YF M K YG+ +
Sbjct: 422 HGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELE 481
Query: 414 HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL 473
HY + D+L RAG+LEEA +FI+KM P W+TLLSSC +H N+E+ + AE + +
Sbjct: 482 HYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTV 541
Query: 474 DPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWS 533
D N +YVL+ ++YAS G+W +++LR MR+KG+RK P CSWI+ K++ H F + D S
Sbjct: 542 DSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRS 601
Query: 534 SPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIP 593
P D+I L+ + +M KEGYV D S VLHDV+ K ++L HSE+LA+AFG++
Sbjct: 602 HPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTE 661
Query: 594 PGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
PG IRV KN+R+C+DCH A K+ISKIT+REI+VRD RFH F G CSCGD+W
Sbjct: 662 PGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 196/369 (53%), Gaps = 38/369 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VS+N +I+G+A G DA+++ M L S T S++L + S V
Sbjct: 202 MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDS-FTLSSVLPIFSEYVDVIK 260
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G++IHG++++ G S V++GS LVDMYAK I D++R F L ++ + +N+++ G ++
Sbjct: 261 GKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQ 320
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G E+ RLFR M+T ++ G F SV
Sbjct: 321 NGRYNEALRLFR-----------QMVTAKVKPG--------------------AVAFSSV 349
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ AC L L GKQ+H +++R N+F+ SALVDMY KC +IK A +F M +
Sbjct: 350 IPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDE 409
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQFHG 299
VSWTA+++G+ +G EAV +F M+R G++P+ +V+++C+++ ++E F+
Sbjct: 410 VSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNS 469
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKAN 358
+ V GL + A+ G+ G +E+++ ++M V S W+ L+S + +
Sbjct: 470 MTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCS----VH 525
Query: 359 ETIDLFEKM 367
+ ++L EK+
Sbjct: 526 KNLELAEKV 534
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 174/365 (47%), Gaps = 38/365 (10%)
Query: 131 FRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLAL 190
F+ +K ++W ++I L +A+ F EMR G D F SVL +C ++ L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 191 EEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK--------------------------- 223
G+ +H FI+R +++ G+AL++MY K
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 224 ---------SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD 274
I VF M K+VVS+ ++ GY Q+G E+A+++ M ++PD
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN 334
FTL SV+ + + +G + HG + G+ S + + ++LV Y K IEDS R+F+
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 301
Query: 335 EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEK 394
+ RD +SW +LV+GY + G+ NE + LF +M++ +KP V V+ AC+ +
Sbjct: 302 RLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHL 361
Query: 395 GRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC 454
G+ +++ G + ++D+ S+ G ++ A+ ++M D + W ++
Sbjct: 362 GKQLHGYVLRG-GFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMGH 419
Query: 455 RIHGN 459
+HG+
Sbjct: 420 ALHGH 424
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 139/312 (44%), Gaps = 48/312 (15%)
Query: 192 EGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYG 251
+ KQ+HA IR + S ++ +Y K + A +F+T+ V++W +++ +
Sbjct: 23 QAKQLHAQFIRTQSLSHT-SASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFT 81
Query: 252 QNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFIT 311
+A+ F M+ +G PD SV+ SC + L G HG + G+ +
Sbjct: 82 DQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLY 141
Query: 312 VSNALVTFYGK---------CGNIEDS---------------------------HRLFNE 335
NAL+ Y K GN+ D R+F
Sbjct: 142 TGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEV 201
Query: 336 MNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKG 395
M +D VS+ +++GYA+ G + + + +M + LKPD TL VL S V KG
Sbjct: 202 MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG 261
Query: 396 RHYFEIMVKEYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
+ ++++ GI D Y + ++D+ +++ R+E+++ +++ + D I W +L++
Sbjct: 262 KEIHGYVIRK-GIDS--DVYIGSSLVDMYAKSARIEDSERVFSRL-YCRDGISWNSLVA- 316
Query: 454 CRIHGNVEIGKW 465
G V+ G++
Sbjct: 317 ----GYVQNGRY 324
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 508 bits (1308), Expect = e-143, Method: Compositional matrix adjust.
Identities = 257/647 (39%), Positives = 399/647 (61%), Gaps = 17/647 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SWN ++SG+A +G V+DA V++ M + + ++++ +L ++
Sbjct: 152 MPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK-----NDVSWNALLSAYVQNSKMEE 206
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+ + S+ + L+ + K I +A++ FD + +++V +NT+ITG +
Sbjct: 207 ACMLFKSRENWALVSW----NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQ 262
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G ++E+R+LF +D +WT M++G +QN + EA +LF +M ++ ++ ++
Sbjct: 263 SGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAM 318
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L +E K++ + NV + ++ Y +C I A+++F M ++
Sbjct: 319 LAGYVQGERMEMAKELFDVMPCR----NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDP 374
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW AM+ GY Q+G S EA+++F M+R G + + S +S+CA++ +LE G Q HGR
Sbjct: 375 VSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGR 434
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ G + V NAL+ Y KCG+IE+++ LF EM +D VSW +++GY++ G
Sbjct: 435 LVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVA 494
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ FE M GLKPD+ T++ VLSACS GLV+KGR YF M ++YG+ P HY CM+D
Sbjct: 495 LRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVD 554
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG LE+A + + MPF PDA W TLL + R+HGN E+ + AA+ + ++P N
Sbjct: 555 LLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGM 614
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS++YAS G+W V +LR MR+KGV+K PG SWI+ +++ H FS D P D+I
Sbjct: 615 YVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEI 674
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
+A LE+L+ +M K GYV S VLHDVE EK +M+ +HSE+LA+A+G++ + G PIRV
Sbjct: 675 FAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRV 734
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+KNLRVC DCHNA KY+++IT R I++RD RFH FK+G CSCGD+W
Sbjct: 735 IKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 119/508 (23%), Positives = 223/508 (43%), Gaps = 85/508 (16%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN+ IS + G N+A++V+ M + S ++++ M
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPR-----WSSVSYNGM-------------------- 101
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+ Y + G A++ FDE+PE+++V +N MI G +R + ++R
Sbjct: 102 ---------------ISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKAR 146
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
LF M ++D SW TM++G QNG +A +F M + + ++ ++L+A
Sbjct: 147 ELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSA----- 197
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVG-SALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
++ K A ++ ++ V + L+ + K K I A F +M ++VVSW ++
Sbjct: 198 YVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTII 257
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR------- 300
GY Q+G +EA ++F D FT +++S +EE + +
Sbjct: 258 TGYAQSGKIDEARQLF----DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEV 313
Query: 301 ---SLVTGLIS-----------------FITVSNALVTFYGKCGNIEDSHRLFNEMNVRD 340
+++ G + ++ N ++T Y +CG I ++ LF++M RD
Sbjct: 314 SWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRD 373
Query: 341 EVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFE 400
VSW A+++GY++ G + E + LF +M G + + + LS C+ +E G+
Sbjct: 374 PVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHG 433
Query: 401 IMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
+VK G ++ + + G +EEA +M D + W T+++ HG
Sbjct: 434 RLVKG-GYETGCFVGNALLLMYCKCGSIEEANDLFKEMA-GKDIVSWNTMIAGYSRHGFG 491
Query: 461 EIGKWAAESLLE--LDPYNPASYVLLSS 486
E+ ES+ L P + +LS+
Sbjct: 492 EVALRFFESMKREGLKPDDATMVAVLSA 519
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 504 bits (1298), Expect = e-142, Method: Compositional matrix adjust.
Identities = 255/642 (39%), Positives = 398/642 (61%), Gaps = 34/642 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLM-LKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIH 65
V WN+++ + + ++ +++ M +++ + N + T+ ++L ++LG QIH
Sbjct: 456 VLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN--QYTYPSILKTCIRLGDLELGEQIH 513
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
I+K F +V S L+DMYAKLG + +T L+R
Sbjct: 514 SQIIKTNFQLNAYVCSVLIDMYAKLGKL------------------DTAWDILIR----- 550
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
F G KD +SWTTMI G Q + +A+ FR+M G+ D+ + ++AC
Sbjct: 551 -----FAG---KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACA 602
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
GL AL+EG+QIHA + ++ +ALV +Y +C I+ + F + ++W A
Sbjct: 603 GLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNA 662
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
++ G+ Q+G +EEA+++F M R GI+ ++FT GS + + + A++++G Q H TG
Sbjct: 663 LVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTG 722
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
S V NAL++ Y KCG+I D+ + F E++ ++EVSW A+++ Y+K G +E +D F+
Sbjct: 723 YDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFD 782
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
+M+ ++P+ VTL+GVLSACS GLV+KG YFE M EYG+ P +HY C++D+L+RA
Sbjct: 783 QMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRA 842
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
G L AK FI +MP PDA+ W TLLS+C +H N+EIG++AA LLEL+P + A+YVLLS
Sbjct: 843 GLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLS 902
Query: 486 SIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELE 545
++YA KWD R+ M+EKGV+K+PG SWI+ K+ +H F D + P +D+I+ +
Sbjct: 903 NLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQ 962
Query: 546 KLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
L ++ + GYV D S+L++++ +K ++ HSEKLAI+FGLL +P +PI V+KNLR
Sbjct: 963 DLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLR 1022
Query: 606 VCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VC+DCH K++SK++ REI+VRDA RFH F+ G CSC D+W
Sbjct: 1023 VCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 233/459 (50%), Gaps = 36/459 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D V++N LI+G + G A++++ M DGL S T +++++ S+ +
Sbjct: 349 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSN-TLASLVVACSADGTLFR 407
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H + K GF S + L+++YAK I A F E +N+V++N M L+
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVM---LVA 464
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL+++ R FR +FR+M++E + +Q+T+ S+
Sbjct: 465 YGLLDDLRNSFR----------------------------IFRQMQIEEIVPNQYTYPSI 496
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C L LE G+QIH+ II+ + + N +V S L+DMY K + A + A K+V
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV 556
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWT M+ GY Q ++A+ F M GI D+ L + +S+CA L +L+EG Q H +
Sbjct: 557 VSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQ 616
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ V+G S + NALVT Y +CG IE+S+ F + D ++W ALVSG+ + G E
Sbjct: 617 ACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEA 676
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ +F +M G+ + T + A S +++G+ ++ K G + +I
Sbjct: 677 LRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALIS 735
Query: 421 ILSRAGRLEEA-KSFINKMPFPPDAIGWATLLSSCRIHG 458
+ ++ G + +A K F+ + + W ++++ HG
Sbjct: 736 MYAKCGSISDAEKQFLEVS--TKNEVSWNAIINAYSKHG 772
Score = 196 bits (499), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 214/457 (46%), Gaps = 34/457 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D SW +ISG + + +A++++ M G+ + FS++L +++G Q+
Sbjct: 252 DHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMP-TPYAFSSVLSACKKIESLEIGEQL 310
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG +LK GF S +V + LV +Y LG + A+
Sbjct: 311 HGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEH-------------------------- 344
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
+F M +D++++ T+I GL Q G +A++LF+ M L+GL D T S++ AC
Sbjct: 345 -----IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 399
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L G+Q+HA+ + N + AL+++Y KC I+ A F +NVV W
Sbjct: 400 SADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWN 459
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
MLV YG + +IF MQ I P+ +T S++ +C L LE G Q H + + T
Sbjct: 460 VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT 519
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
V + L+ Y K G ++ + + +D VSWT +++GY ++ ++ + F
Sbjct: 520 NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTF 579
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+ML G++ DEV L +SAC+ +++G+ G ++ + SR
Sbjct: 580 RQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYSR 638
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
G++EE+ + D I W L+S + GN E
Sbjct: 639 CGKIEESYLAFEQTE-AGDNIAWNALVSGFQQSGNNE 674
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 218/456 (47%), Gaps = 41/456 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTML-IMSSSRRCVD 59
MP +WN +I AS + + ++ M+ + + + TFS +L D
Sbjct: 146 MPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENV-TPNEGTFSGVLEACRGGSVAFD 204
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+ QIH IL G V +PL+D+Y+
Sbjct: 205 VVEQIHARILYQGLRDSTVVCNPLIDLYS------------------------------- 233
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
R G V+ +RR+F G++ KD SW MI+GL +N E EAI LF +M + G+ + F S
Sbjct: 234 RNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSS 293
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL+AC + +LE G+Q+H +++ + +V +ALV +Y ++ AE +F M+ ++
Sbjct: 294 VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRD 353
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
V++ ++ G Q G E+A+++F M +G+EPD TL S++ +C+ +L G Q H
Sbjct: 354 AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 413
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ G S + AL+ Y KC +IE + F E V + V W ++ Y
Sbjct: 414 YTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRN 473
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH-YFEIMVKEYGIRPIHDHYTC- 417
+ +F +M + P++ T +L C R G +E G + +I+ + + + Y C
Sbjct: 474 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL----NAYVCS 529
Query: 418 -MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ID+ ++ G+L+ A + + D + W T+++
Sbjct: 530 VLIDMYAKLGKLDTAWDILIRFA-GKDVVSWTTMIA 564
Score = 192 bits (487), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 114/341 (33%), Positives = 173/341 (50%), Gaps = 32/341 (9%)
Query: 58 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
+D GR++H ILK G S + L D Y G +Y A + FDE+PE+ I +N MI
Sbjct: 101 LDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKE 160
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
L R L+ E LF M E + ++ TF
Sbjct: 161 LASRNLI-------------------------------GEVFGLFVRMVSENVTPNEGTF 189
Query: 178 GSVLTAC-GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
VL AC GG +A + +QIHA I+ +D+ V + L+D+Y + + A VF +
Sbjct: 190 SGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR 249
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
K+ SW AM+ G +N C EA+++FC+M GI P + SV+S+C + SLE G Q
Sbjct: 250 LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQ 309
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
HG L G S V NALV+ Y GN+ + +F+ M+ RD V++ L++G ++ G
Sbjct: 310 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGY 369
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH 397
+ ++LF++M GL+PD TL ++ ACS G + +G+
Sbjct: 370 GEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 410
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 159/348 (45%), Gaps = 34/348 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW +I+G+ + + A+ + ML G+ + + + + + + + G+QI
Sbjct: 555 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS-DEVGLTNAVSACAGLQALKEGQQI 613
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H GF S + + LV +Y++ G I ++ F++ + + +N +++G
Sbjct: 614 HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSG------- 666
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
Q+G EA+ +F M EG+ + FTFGS + A
Sbjct: 667 ------------------------FQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAA 702
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
+++GKQ+HA I + + V +AL+ MY KC SI AE F ++ KN VSW
Sbjct: 703 SETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWN 762
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQFHGRSLV 303
A++ Y ++G EA+ F M + + P+ TL V+S+C+++ +++G F +
Sbjct: 763 AIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSE 822
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
GL +V + G + + EM ++ D + W L+S
Sbjct: 823 YGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSA 870
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 133/306 (43%), Gaps = 12/306 (3%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
+L+EG+++H+ I++ N + L D Y + A VF M + + +W M+
Sbjct: 100 SLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIK 159
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC-ANLASLEEGTQFHGRSLVTGLI 307
E +F M + P++ T V+ +C + + Q H R L GL
Sbjct: 160 ELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLR 219
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
V N L+ Y + G ++ + R+F+ + ++D SW A++SG +K E I LF M
Sbjct: 220 DSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDM 279
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC--MIDILSRA 425
G+ P VLSAC + +E G +++K G D Y C ++ +
Sbjct: 280 YVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK-LGFSS--DTYVCNALVSLYFHL 336
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESL--LELDPYNPASYVL 483
G L A+ + M DA+ + TL++ G G+ A E + LD P S L
Sbjct: 337 GNLISAEHIFSNMS-QRDAVTYNTLINGLSQCG---YGEKAMELFKRMHLDGLEPDSNTL 392
Query: 484 LSSIYA 489
S + A
Sbjct: 393 ASLVVA 398
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 500 bits (1287), Expect = e-140, Method: Compositional matrix adjust.
Identities = 254/643 (39%), Positives = 404/643 (62%), Gaps = 37/643 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V+WN +ISG+A++G +A+ ++ M + + LS +F++++ + ++ + + Q+H
Sbjct: 261 VTWNSMISGYAANGLDLEALGMFYSMRLNYV-RLSESSFASVIKLCANLKELRFTEQLHC 319
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++K+GF + + L+ Y+K + DA R F E+ G V
Sbjct: 320 SVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEI------------------GCV-- 359
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+ +SWT MI+G +QN + EA+DLF EM+ +G+ ++FT+ +LTA
Sbjct: 360 ----------GNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA--- 406
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L + ++HA +++ +++ + VG+AL+D Y K ++ A VF + K++V+W+AM
Sbjct: 407 -LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAM 465
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANL-ASLEEGTQFHGRSLVTG 305
L GY Q G +E A+K+F + + GI+P++FT S+++ CA AS+ +G QFHG ++ +
Sbjct: 466 LAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSR 525
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
L S + VS+AL+T Y K GNIE + +F +D VSW +++SGYA+ G+A + +D+F+
Sbjct: 526 LDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFK 585
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
+M +K D VT IGV +AC+ AGLVE+G YF+IMV++ I P +H +CM+D+ SRA
Sbjct: 586 EMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRA 645
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
G+LE+A I MP P + W T+L++CR+H E+G+ AAE ++ + P + A+YVLLS
Sbjct: 646 GQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLS 705
Query: 486 SIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELE 545
++YA G W +++R+ M E+ V+K+PG SWI+ K++ + F A D S P DQIY +LE
Sbjct: 706 NMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLE 765
Query: 546 KLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
L+ ++ GY PD S VL D++ K +L HSE+LAIAFGL+ P G P+ ++KNLR
Sbjct: 766 DLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLR 825
Query: 606 VCSDCHNATKYISKITQREILVRDAVRFHLF-KNGECSCGDFW 647
VC DCH K I+KI +REI+VRD+ RFH F +G CSCGDFW
Sbjct: 826 VCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/466 (28%), Positives = 228/466 (48%), Gaps = 49/466 (10%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL- 60
P D S+ L+ G + G +A +++ + + G+ + FS++L +S++ C +L
Sbjct: 54 PGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGM-EMDCSIFSSVLKVSATL-CDELF 111
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H +KFGF V VG+ LVD Y K D ++ FDE+ E+N+V + T+I+G R
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
N + E + LF M+ EG + FTF +
Sbjct: 172 -------------------------------NSMNDEVLTLFMRMQNEGTQPNSFTFAAA 200
Query: 181 LTACGGLLALE----EGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
L G+LA E G Q+H +++N + V ++L+++Y KC +++ A +F
Sbjct: 201 L----GVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTE 256
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
K+VV+W +M+ GY NG EA+ +F +M+ N + + + SVI CANL L Q
Sbjct: 257 VKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQ 316
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN-VRDEVSWTALVSGYAKFG 355
H + G + + AL+ Y KC + D+ RLF E+ V + VSWTA++SG+ +
Sbjct: 317 LHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQND 376
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
E +DLF +M G++P+E T +L+A ++ + +++ Y
Sbjct: 377 GKEEAVDLFSEMKRKGVRPNEFTYSVILTALP---VISPSEVHAQVVKTNYERSSTVG-- 431
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
T ++D + G++EEA + + D + W+ +L+ G E
Sbjct: 432 TALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAGYAQTGETE 476
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 232/465 (49%), Gaps = 48/465 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + V+W LISG+A + S+ND V + +++ + TF+ L + +
Sbjct: 154 MKERNVVTWTTLISGYARN-SMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGR 212
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+H ++K G + V + L+++Y L+
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLY-------------------------------LK 241
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G V ++R LF + K ++W +MI+G NGL+ EA+ +F MRL + + + +F SV
Sbjct: 242 CGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASV 301
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW-KN 239
+ C L L +Q+H +++ + + +AL+ Y KC ++ A +F+ + N
Sbjct: 302 IKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGN 361
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VVSWTAM+ G+ QN EEAV +F M+R G+ P++FT ++++ ++ ++ H
Sbjct: 362 VVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP----SEVHA 417
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ + T TV AL+ Y K G +E++ ++F+ ++ +D V+W+A+++GYA+ G+
Sbjct: 418 QVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEA 477
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGL-VEKGRHYFEIMVKEYGIRPIHDHYTC- 417
I +F ++ G+KP+E T +L+ C+ + +G+ + + I+ D C
Sbjct: 478 AIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQF-----HGFAIKSRLDSSLCV 532
Query: 418 ---MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
++ + ++ G +E A+ + K D + W +++S HG
Sbjct: 533 SSALLTMYAKKGNIESAEE-VFKRQREKDLVSWNSMISGYAQHGQ 576
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 161/337 (47%), Gaps = 8/337 (2%)
Query: 122 GLVEESR-----RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
G V SR LF +D S+ +++ G ++G +EA LF + G+ MD
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
F SVL L G+Q+H I+ D+V VG++LVD Y K + K VF M
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
+NVV+WT ++ GY +N ++E + +F MQ G +P+ FT + + A G Q
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H + GL I VSN+L+ Y KCGN+ + LF++ V+ V+W +++SGYA G
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
Query: 357 ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVE-KGRHYFEIMVKEYGIRPIHDHY 415
E + +F M + ++ E + V+ C A L E + V +YG +
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLC--ANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
T ++ S+ + +A ++ + + W ++S
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMIS 370
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 113/236 (47%), Gaps = 40/236 (16%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTML-IMSSSRRCVDLGRQ 63
D V+W+ +++G+A G A+K++ + K G+ + TFS++L + +++ + G+Q
Sbjct: 458 DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGI-KPNEFTFSSILNVCAATNASMGQGKQ 516
Query: 64 IHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
HG +K S + V S L+ MYAK G I A+ F EK++V +N+MI+
Sbjct: 517 FHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMIS------- 569
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
G Q+G +A+D+F+EM+ + MD TF V A
Sbjct: 570 ------------------------GYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAA 605
Query: 184 CGGLLALEEGKQIHAFIIRN----DHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
C +EEG++ ++R+ K++ S +VD+Y + ++ A V M
Sbjct: 606 CTHAGLVEEGEKYFDIMVRDCKIAPTKEH---NSCMVDLYSRAGQLEKAMKVIENM 658
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 498 bits (1283), Expect = e-140, Method: Compositional matrix adjust.
Identities = 245/605 (40%), Positives = 377/605 (62%), Gaps = 1/605 (0%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
T+ ++ + S R ++ G+++H HI GF + + + L+ MYAK G + DA++ FDE+
Sbjct: 87 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM 146
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
P +++ +N M+ G GL+EE+R+LF M +KDS SWT M+TG ++ EA+ L+
Sbjct: 147 PNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYS 206
Query: 164 EM-RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC 222
M R+ + FT + A + + GK+IH I+R + + S+L+DMY KC
Sbjct: 207 LMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKC 266
Query: 223 KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
I A ++F + K+VVSWT+M+ Y ++ E +F + + P+++T V+
Sbjct: 267 GCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVL 326
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
++CA+L + E G Q HG G + S++LV Y KCGNIE + + + D V
Sbjct: 327 NACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLV 386
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
SWT+L+ G A+ G+ +E + F+ +L G KPD VT + VLSAC+ AGLVEKG +F +
Sbjct: 387 SWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSI 446
Query: 403 VKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
+++ + DHYTC++D+L+R+GR E+ KS I++MP P WA++L C +GN+++
Sbjct: 447 TEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDL 506
Query: 463 GKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKS 522
+ AA+ L +++P NP +YV +++IYA+ GKW+ ++R+ M+E GV K PG SW + K
Sbjct: 507 AEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKR 566
Query: 523 RVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEK 582
+ H+F A D S P +QI L +L +KM +EGYVP S VLHDVE +K + L +HSEK
Sbjct: 567 KRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEK 626
Query: 583 LAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECS 642
LA+AF +L G I+V KNLR C DCH A K+IS IT+R+I VRD+ RFH F+NG+CS
Sbjct: 627 LAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCS 686
Query: 643 CGDFW 647
CGD+W
Sbjct: 687 CGDYW 691
Score = 169 bits (428), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 201/438 (45%), Gaps = 66/438 (15%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D SW +++G+ +A+ +Y+LM + + T S + +++ +C+
Sbjct: 177 MTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRR 236
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G++IHGHI++ G S + S L+DMY K G I +A+ FD++ EK++V
Sbjct: 237 GKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVV----------- 285
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SWT+MI ++ RE LF E+ +++TF V
Sbjct: 286 --------------------SWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGV 325
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L E GKQ+H ++ R F S+LVDMY KC +I+ A+ V ++
Sbjct: 326 LNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDL 385
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWT+++ G QNG +EA+K F + ++G +PD T +V+S+C + +E+G +F
Sbjct: 386 VSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEF--- 442
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
FY +I + HRL + + +T LV A+ G+ +
Sbjct: 443 ------------------FY----SITEKHRLSHTSD-----HYTCLVDLLARSGRFEQL 475
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ +M +KP + VL CS G ++ + + K P+ Y M +
Sbjct: 476 KSVISEM---PMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPV--TYVTMAN 530
Query: 421 ILSRAGRLEEAKSFINKM 438
I + AG+ EE +M
Sbjct: 531 IYAAAGKWEEEGKMRKRM 548
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 104/238 (43%), Gaps = 49/238 (20%)
Query: 258 EAVKIFCNMQ--RNGIE-------PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
EA+ + C + R ++ P T ++I C+ +LEEG + H +G +
Sbjct: 59 EAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVP 118
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
I + N L+ Y KCG++ D+ ++F+EM RD SW +V+GYA+ G E LF++M
Sbjct: 119 GIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM- 177
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRP------------------ 410
+ D + +++ + E+ + +M + RP
Sbjct: 178 ---TEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCI 234
Query: 411 -----IHDH------------YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
IH H ++ ++D+ + G ++EA++ +K+ D + W +++
Sbjct: 235 RRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI-VEKDVVSWTSMI 291
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 493 bits (1268), Expect = e-138, Method: Compositional matrix adjust.
Identities = 247/636 (38%), Positives = 393/636 (61%), Gaps = 6/636 (0%)
Query: 13 ISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFG 72
I+ S G++ +A + + L + N S F+ + ++R+ + G+Q+H ++ G
Sbjct: 20 IATLCSKGNLREAFQRFRLNI---FTNTS--LFTPFIQSCTTRQSLPSGKQLHCLLVVSG 74
Query: 73 FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFR 132
F S F+ + L+ MY+KLG A + + +KN + N +I G +R G + +R++F
Sbjct: 75 FSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFD 134
Query: 133 GMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEE 192
M D+ +W MI GL+Q E + LFREM G + D++T GSV + GL ++
Sbjct: 135 EMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSI 194
Query: 193 GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
G+QIH + I+ + ++ V S+L MY + ++ E V R+M +N+V+W +++G Q
Sbjct: 195 GQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQ 254
Query: 253 NGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITV 312
NGC E + ++ M+ +G P+ T +V+SSC++LA +G Q H ++ G S + V
Sbjct: 255 NGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAV 314
Query: 313 SNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH-G 371
++L++ Y KCG + D+ + F+E DEV W++++S Y G+ +E I+LF M
Sbjct: 315 VSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTN 374
Query: 372 LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEA 431
++ +EV + +L ACS +GL +KG F++MV++YG +P HYTC++D+L RAG L++A
Sbjct: 375 MEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQA 434
Query: 432 KSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASK 491
++ I MP D + W TLLS+C IH N E+ + + +L++DP + A YVLL++++AS
Sbjct: 435 EAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASA 494
Query: 492 GKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKM 551
+W VS++R++MR+K V+K+ G SW ++K VH F D S S +IY+ L++L +M
Sbjct: 495 KRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEM 554
Query: 552 IKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCH 611
+GY PD +SVLHD++ EK L HSEKLA+AF L+ +P G PIR++KNLRVCSDCH
Sbjct: 555 KLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCH 614
Query: 612 NATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
A KYIS I REI +RD RFH F NG+CSCGD+W
Sbjct: 615 VAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 650
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 169/372 (45%), Gaps = 37/372 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLG-NLSRITFSTMLIMSSSRRCVD 59
MP +WN +I+G + + ++ M GLG + T ++ S+ R V
Sbjct: 136 MPDRKLTTWNAMIAGLIQFEFNEEGLSLFREM--HGLGFSPDEYTLGSVFSGSAGLRSVS 193
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+G+QIHG+ +K+G + V S L MY + G + D + +P +N+V +NT+I
Sbjct: 194 IGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLI---- 249
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
G QNG + L++ M++ G ++ TF +
Sbjct: 250 ---------------------------MGNAQNGCPETVLYLYKMMKISGCRPNKITFVT 282
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
VL++C L +G+QIHA I+ V V S+L+ MY KC + A F ++
Sbjct: 283 VLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDED 342
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
V W++M+ YG +G +EA+++F M ++ +E ++ +++ +C++ ++G +
Sbjct: 343 EVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELF 402
Query: 299 GRSLVT-GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGK 356
+ G + +V G+ G ++ + + M ++ D V W L+S
Sbjct: 403 DMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKN 462
Query: 357 ANETIDLFEKML 368
A +F+++L
Sbjct: 463 AEMAQRVFKEIL 474
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 132/281 (46%), Gaps = 43/281 (15%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+WN LI G+A +G + +Y +M G ++ITF T+L S
Sbjct: 237 MPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGC-RPNKITFVTVLSSCSDLAIRGQ 295
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIH +K G S V V S L+ MY+K G + DA + F E +++ VM+++MI+
Sbjct: 296 GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGF 355
Query: 121 RGLVEESRRLFRGMKDK-----DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
G +E+ LF M ++ + +++ ++ +GL+ + ++LF M ++++
Sbjct: 356 HGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMM------VEKY 409
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
F K + + +VD+ + + AE++ R+M
Sbjct: 410 GF----------------------------KPGLKHYTCVVDLLGRAGCLDQAEAIIRSM 441
Query: 236 AWK-NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDD 275
K ++V W +L + +E A ++F + + I+P+D
Sbjct: 442 PIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ--IDPND 480
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 491 bits (1265), Expect = e-138, Method: Compositional matrix adjust.
Identities = 255/648 (39%), Positives = 382/648 (58%), Gaps = 33/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +SWN +I+G+ S+G + V+ ML G+ + T ++ + R + L
Sbjct: 256 MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGI-EIDLATIVSVFAGCADSRLISL 314
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR +H +K F + L+DMY+K G + AK
Sbjct: 315 GRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKA---------------------- 352
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+FR M D+ +S+T+MI G + GL EA+ LF EM EG++ D +T +V
Sbjct: 353 ---------VFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAV 403
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L C L+EGK++H +I ND ++FV +AL+DMY KC S++ AE VF M K++
Sbjct: 404 LNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDI 463
Query: 241 VSWTAMLVGYGQNGCSEEAVKIF-CNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+SW ++ GY +N + EA+ +F ++ PD+ T+ V+ +CA+L++ ++G + HG
Sbjct: 464 ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHG 523
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ G S V+N+LV Y KCG + +H LF+++ +D VSWT +++GY G E
Sbjct: 524 YIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKE 583
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
I LF +M G++ DE++ + +L ACS +GLV++G +F IM E I P +HY C++
Sbjct: 584 AIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIV 643
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L+R G L +A FI MP PPDA W LL CRIH +V++ + AE + EL+P N
Sbjct: 644 DMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTG 703
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
YVL+++IYA KW+ V +LR+ + ++G+RK+PGCSWI+ K RV+IF A D S+P ++
Sbjct: 704 YYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEN 763
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
I A L K+ +MI+EGY P L D E EK + L HSEKLA+A G++ G IR
Sbjct: 764 IEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIR 823
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V KNLRVC DCH K++SK+T+REI++RD+ RFH FK+G CSC FW
Sbjct: 824 VTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 219 bits (558), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 135/451 (29%), Positives = 230/451 (50%), Gaps = 35/451 (7%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN+L++ A G + ++ ++ M+ G+ + TFS + SS R V G Q+HG I
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGV-EMDSYTFSCVSKSFSSLRSVHGGEQLHGFI 221
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
LK GFG VG+ LV Y K + A++ FDE+ E++++ +N++I G +
Sbjct: 222 LKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV--------- 272
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
NGL + + +F +M + G+ +D T SV C
Sbjct: 273 ----------------------SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSR 310
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
+ G+ +H+ ++ + L+DMY KC + A++VFR M+ ++VVS+T+M+
Sbjct: 311 LISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIA 370
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
GY + G + EAVK+F M+ GI PD +T+ +V++ CA L+EG + H L
Sbjct: 371 GYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF 430
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
I VSNAL+ Y KCG+++++ +F+EM V+D +SW ++ GY+K ANE + LF +L
Sbjct: 431 DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLL 490
Query: 369 SHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
PDE T+ VL AC+ +KGR +++ H + ++D+ ++ G
Sbjct: 491 EEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS-LVDMYAKCGA 549
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
L A + + D + W +++ +HG
Sbjct: 550 LLLAHMLFDDIA-SKDLVSWTVMIAGYGMHG 579
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 216/432 (50%), Gaps = 36/432 (8%)
Query: 20 GSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFV 79
G++ +AVK L+ G ++ T ++L + + + + G+++ I GF +
Sbjct: 75 GNLENAVK---LLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNL 131
Query: 80 GSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDS 139
GS L MY G + +A R FDE+ K + +
Sbjct: 132 GSKLSLMYTNCGDLKEASRVFDEV-------------------------------KIEKA 160
Query: 140 ISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAF 199
+ W ++ L ++G +I LF++M G+ MD +TF V + L ++ G+Q+H F
Sbjct: 161 LFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGF 220
Query: 200 IIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEA 259
I+++ + VG++LV Y K + + A VF M ++V+SW +++ GY NG +E+
Sbjct: 221 ILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG 280
Query: 260 VKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTF 319
+ +F M +GIE D T+ SV + CA+ + G H + N L+
Sbjct: 281 LSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDM 340
Query: 320 YGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTL 379
Y KCG+++ + +F EM+ R VS+T++++GYA+ G A E + LFE+M G+ PD T+
Sbjct: 341 YSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 400
Query: 380 IGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP 439
VL+ C+R L+++G+ E +KE + ++D+ ++ G ++EA+ ++M
Sbjct: 401 TAVLNCCARYRLLDEGKRVHE-WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR 459
Query: 440 FPPDAIGWATLL 451
D I W T++
Sbjct: 460 V-KDIISWNTII 470
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 491 bits (1264), Expect = e-138, Method: Compositional matrix adjust.
Identities = 255/663 (38%), Positives = 391/663 (58%), Gaps = 16/663 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSWN +I +A G A+++++ M + IT +L +S L
Sbjct: 188 MSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSL 247
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H + +FVG+ LVDMYAK G++ +A F + K++V +N M+ G +
Sbjct: 248 GKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQ 307
Query: 121 RGLVEESRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 176
G E++ RLF M+++ D ++W+ I+G Q GL EA+ + R+M G+ ++ T
Sbjct: 308 IGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVT 367
Query: 177 FGSVLTACGGLLALEEGKQIHAFIIR-------NDHKDNVFVGSALVDMYCKCKSIKYAE 229
SVL+ C + AL GK+IH + I+ N H D V + L+DMY KCK + A
Sbjct: 368 LISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTAR 427
Query: 230 SVFRTMAWK--NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE--PDDFTLGSVISSC 285
++F +++ K +VV+WT M+ GY Q+G + +A+++ M + P+ FT+ + +C
Sbjct: 428 AMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVAC 487
Query: 286 ANLASLEEGTQFHGRSLVTGLISF-ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
A+LA+L G Q H +L + + VSN L+ Y KCG+I D+ +F+ M ++EV+W
Sbjct: 488 ASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTW 547
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
T+L++GY G E + +F++M G K D VTL+ VL ACS +G++++G YF M
Sbjct: 548 TSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKT 607
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
+G+ P +HY C++D+L RAGRL A I +MP P + W LS CRIHG VE+G+
Sbjct: 608 VFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGE 667
Query: 465 WAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRV 524
+AAE + EL + SY LLS++YA+ G+W V+++R MR KGV+K PGCSW++
Sbjct: 668 YAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGT 727
Query: 525 HIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLA 584
F D + P++ +IY L +++ GYVP+ LHDV+ EK +L HSEKLA
Sbjct: 728 TTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLA 787
Query: 585 IAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCG 644
+A+G+L P G IR+ KNLRVC DCH A Y+S+I +I++RD+ RFH FKNG CSC
Sbjct: 788 LAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCK 847
Query: 645 DFW 647
+W
Sbjct: 848 GYW 850
Score = 186 bits (471), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 134/502 (26%), Positives = 222/502 (44%), Gaps = 90/502 (17%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN LI + +G N + ++ LM TF + V G H
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSW-TPDNYTFPFVFKACGEISSVRCGESAHALS 153
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
L GF S VFVG+ LV MY++ + DA++ FDE+ ++V
Sbjct: 154 LVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVV------------------- 194
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE-GLAMDQFTFGSVLTACGGL 187
SW ++I + G + A+++F M E G D T +VL C L
Sbjct: 195 ------------SWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASL 242
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
GKQ+H F + ++ N+FVG+ LVDMY KC + A +VF M+ K+VVSW AM+
Sbjct: 243 GTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMV 302
Query: 248 VGYGQNGCSEEAVKIFCNMQR-----------------------------------NGIE 272
GY Q G E+AV++F MQ +GI+
Sbjct: 303 AGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIK 362
Query: 273 PDDFTLGSVISSCANLASLEEGTQFHGRSL-------VTGLISFITVSNALVTFYGKCGN 325
P++ TL SV+S CA++ +L G + H ++ G V N L+ Y KC
Sbjct: 363 PNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKK 422
Query: 326 IEDSHRLFNEMNV--RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGL--KPDEVTLIG 381
++ + +F+ ++ RD V+WT ++ GY++ G AN+ ++L +M +P+ T+
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISC 482
Query: 382 VLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY-----TCMIDILSRAGRLEEAKSFIN 436
L AC+ + G+ + Y +R + C+ID+ ++ G + +A+ +
Sbjct: 483 ALVACASLAALRIGKQ-----IHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFD 537
Query: 437 KMPFPPDAIGWATLLSSCRIHG 458
M + + W +L++ +HG
Sbjct: 538 NM-MAKNEVTWTSLMTGYGMHG 558
Score = 179 bits (454), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 207/441 (46%), Gaps = 53/441 (12%)
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDS--ISWTTMITGLMQNGLEREAIDLFREMRLEGLA 171
+I+ + G + + L R D+ W ++I NG + + LF M
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
D +TF V ACG + ++ G+ HA + NVFVG+ALV MY +C+S+ A V
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN-GIEPDDFTLGSVISSCANLAS 290
F M+ +VVSW +++ Y + G + A+++F M G PD+ TL +V+ CA+L +
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
G Q H ++ + +I + V N LV Y KCG +++++ +F+ M+V+D VSW A+V+G
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAG 304
Query: 351 YAKFGKANETIDLFEK-----------------------------------MLSHGLKPD 375
Y++ G+ + + LFEK MLS G+KP+
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364
Query: 376 EVTLIGVLSACSRAGLVEKGRHY------FEIMVKEYGIRPIHDHYTCMIDILSRAGRLE 429
EVTLI VLS C+ G + G+ + I +++ G + +ID+ ++ +++
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVD 424
Query: 430 EAKSFINKM-PFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD-PYNPASYVLLSSI 487
A++ + + P D + W ++ HG+ + E D P ++ + ++
Sbjct: 425 TARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCAL 484
Query: 488 YASK-------GKWDHVSQLR 501
A GK H LR
Sbjct: 485 VACASLAALRIGKQIHAYALR 505
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 134/256 (52%), Gaps = 10/256 (3%)
Query: 213 SALVDMYCKCKSIKYAESVFRTMAWKN--VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
S L+ Y + +A S+ R + V W +++ YG NGC+ + + +F M
Sbjct: 63 SHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLS 122
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
PD++T V +C ++S+ G H SLVTG IS + V NALV Y +C ++ D+
Sbjct: 123 WTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDAR 182
Query: 331 RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSH-GLKPDEVTLIGVLSACSRA 389
++F+EM+V D VSW +++ YAK GK +++F +M + G +PD +TL+ VL C+
Sbjct: 183 KVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASL 242
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
G G+ V I+ + C++D+ ++ G ++EA + + M D + W
Sbjct: 243 GTHSLGKQLHCFAVTSEMIQNMFVG-NCLVDMYAKCGMMDEANTVFSNMSV-KDVVSWNA 300
Query: 450 LLSSCRIHGNVEIGKW 465
+++ G +IG++
Sbjct: 301 MVA-----GYSQIGRF 311
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 486 bits (1250), Expect = e-136, Method: Compositional matrix adjust.
Identities = 250/647 (38%), Positives = 382/647 (59%), Gaps = 32/647 (4%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D +SWN +I+G A +G +AV ++ +L+ GL S + SS + L
Sbjct: 376 MSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSL 435
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+Q+H H +K S FV + L+D Y+ R
Sbjct: 436 SKQVHVHAIKINNVSDSFVSTALIDAYS-------------------------------R 464
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
++E+ LF + D ++W M+ G Q+ + + LF M +G D FT +V
Sbjct: 465 NRCMKEAEILFE-RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATV 523
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
CG L A+ +GKQ+HA+ I++ + +++V S ++DMY KC + A+ F ++ +
Sbjct: 524 FKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDD 583
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+WT M+ G +NG E A +F M+ G+ PD+FT+ ++ + + L +LE+G Q H
Sbjct: 584 VAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHAN 643
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+L + V +LV Y KCG+I+D++ LF + + + +W A++ G A+ G+ ET
Sbjct: 644 ALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKET 703
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LF++M S G+KPD+VT IGVLSACS +GLV + + M +YGI+P +HY+C+ D
Sbjct: 704 LQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLAD 763
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
L RAG +++A++ I M A + TLL++CR+ G+ E GK A LLEL+P + ++
Sbjct: 764 ALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSA 823
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS++YA+ KWD + R M+ V+KDPG SWI+ K+++HIF DD S+ ++ I
Sbjct: 824 YVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELI 883
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y +++ + R + +EGYVP+ L DVE EK + L +HSEKLA+AFGLL PP PIRV
Sbjct: 884 YRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRV 943
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+KNLRVC DCHNA KYI+K+ REI++RDA RFH FK+G CSCGD+W
Sbjct: 944 IKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 192/459 (41%), Gaps = 75/459 (16%)
Query: 1 MPFHDGVSWNLLISGHASHG-----SVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSR 55
MP D VSWN +++ +A ++ A ++ ++ +D + SR+T S ML +
Sbjct: 100 MPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYT-SRMTLSPMLKLCLHS 158
Query: 56 RCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
V HG+ K G FV LV++Y
Sbjct: 159 GYVWASESFHGYACKIGLDGDEFVAGALVNIY---------------------------- 190
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
L+ G V+E + LF M +D + W M+ ++ G + EAIDL GL ++
Sbjct: 191 ---LKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEI 247
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
T + G + Q+ +F ND + +E +FR
Sbjct: 248 TLRLLARISGDD---SDAGQVKSFANGND-------------------ASSVSEIIFRNK 285
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
L Y +G +K F +M + +E D T ++++ + SL G
Sbjct: 286 G----------LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQ 335
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
Q H +L GL +TVSN+L+ Y K + +F+ M+ RD +SW ++++G A+ G
Sbjct: 336 QVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNG 395
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
E + LF ++L GLKPD+ T+ VL A S L E ++ V I + D +
Sbjct: 396 LEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS--SLPEGLSLSKQVHVHAIKINNVSDSF 453
Query: 416 --TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
T +ID SR ++EA+ + F D + W +++
Sbjct: 454 VSTALIDAYSRNRCMKEAEILFERHNF--DLVAWNAMMA 490
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 96/192 (50%), Gaps = 5/192 (2%)
Query: 193 GKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQ 252
GK HA I+ + F+ + L+ MY KC S+ YA VF M +++VSW ++L Y Q
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 253 NG-CSEEAVK----IFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
+ C E ++ +F ++++ + TL ++ C + + FHG + GL
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLD 177
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
V+ ALV Y K G +++ LF EM RD V W ++ Y + G E IDL
Sbjct: 178 GDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAF 237
Query: 368 LSHGLKPDEVTL 379
S GL P+E+TL
Sbjct: 238 HSSGLNPNEITL 249
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 94/184 (51%), Gaps = 7/184 (3%)
Query: 100 FDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNG---LE- 155
F+E PE+ ++ N +I+ + G + +RR+F M D+D +SW +++ Q+ +E
Sbjct: 68 FEENPERFLI--NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVEN 125
Query: 156 -REAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSA 214
++A LFR +R + + + T +L C + + H + + + FV A
Sbjct: 126 IQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGA 185
Query: 215 LVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD 274
LV++Y K +K + +F M +++VV W ML Y + G EEA+ + +G+ P+
Sbjct: 186 LVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPN 245
Query: 275 DFTL 278
+ TL
Sbjct: 246 EITL 249
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 481 bits (1238), Expect = e-135, Method: Compositional matrix adjust.
Identities = 246/665 (36%), Positives = 386/665 (58%), Gaps = 42/665 (6%)
Query: 23 NDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSP 82
++ V++ M GL S + + + + +G+QIH G FV
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHV-LPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGS 156
Query: 83 LVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMK----DKD 138
+ MY + G + DA++ FD + +K++V + ++ R+G +EE R+ M+ + +
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 139 SISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHA 198
+SW +++G ++G +EA+ +F+++ G DQ T SVL + G L G+ IH
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHG 276
Query: 199 FIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF-------------------------- 232
++I+ + V SA++DMY K + S+F
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDK 336
Query: 233 ----------RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
+TM NVVSWT+++ G QNG EA+++F MQ G++P+ T+ S++
Sbjct: 337 ALEMFELFKEQTMEL-NVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
+C N+A+L G HG ++ L+ + V +AL+ Y KCG I S +FN M ++ V
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV 455
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
W +L++G++ GKA E + +FE ++ LKPD ++ +LSAC + GL ++G YF++M
Sbjct: 456 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Query: 403 VKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
+EYGI+P +HY+CM+++L RAG+L+EA I +MPF PD+ W LL+SCR+ NV++
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 575
Query: 463 GKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKS 522
+ AAE L L+P NP +YVLLS+IYA+KG W V +R M G++K+PGCSWI+ K+
Sbjct: 576 AEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKN 635
Query: 523 RVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEK 582
RV+ A D S P DQI ++++++++M K G+ P++ LHDVE E+ +ML HSEK
Sbjct: 636 RVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEK 695
Query: 583 LAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECS 642
LA+ FGLL P G P++V+KNLR+C DCH K+IS REI +RD RFH FK+G CS
Sbjct: 696 LAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICS 755
Query: 643 CGDFW 647
CGDFW
Sbjct: 756 CGDFW 760
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 193/349 (55%), Gaps = 7/349 (2%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
VSWN ++SG G +AV ++ + G ++T S++L +++GR IHG
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCP-DQVTVSSVLPSVGDSEMLNMGRLIHG 276
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
+++K G V S ++DMY K G +Y F++ + N ITGL R GLV++
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDK 336
Query: 127 SRRLFRGMKDK----DSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
+ +F K++ + +SWT++I G QNG + EA++LFREM++ G+ + T S+L
Sbjct: 337 ALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLP 396
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
ACG + AL G+ H F +R DNV VGSAL+DMY KC I ++ VF M KN+V
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVC 456
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHGRS 301
W +++ G+ +G ++E + IF ++ R ++PD + S++S+C + +EG + F S
Sbjct: 457 WNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMS 516
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVS 349
G+ + + +V G+ G +++++ L EM D W AL++
Sbjct: 517 EEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLN 565
Score = 142 bits (358), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 114/479 (23%), Positives = 193/479 (40%), Gaps = 103/479 (21%)
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
Q H ILK G + ++ + L+ Y+ DA +P+ I ++++I L +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
L +S I +F M GL D ++
Sbjct: 96 LFTQS-------------------------------IGVFSRMFSHGLIPDSHVLPNLFK 124
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
C L A + GKQIH + + FV ++ MY +C + A VF M+ K+VV+
Sbjct: 125 VCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVT 184
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIE------------------------------ 272
+A+L Y + GC EE V+I M+ +GIE
Sbjct: 185 CSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIH 244
Query: 273 -----PDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIE 327
PD T+ SV+ S + L G HG + GL+ V +A++ YGK G++
Sbjct: 245 HLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVY 304
Query: 328 DSHRLFNEMNVRDE-----------------------------------VSWTALVSGYA 352
LFN+ + + VSWT++++G A
Sbjct: 305 GIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCA 364
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
+ GK E ++LF +M G+KP+ VT+ +L AC + GR V+ + + +H
Sbjct: 365 QNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVH 424
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL 471
+ +ID+ ++ GR+ ++ N MP + + W +L++ +HG + ESL+
Sbjct: 425 VG-SALIDMYAKCGRINLSQIVFNMMP-TKNLVCWNSLMNGFSMHGKAKEVMSIFESLM 481
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/420 (20%), Positives = 176/420 (41%), Gaps = 61/420 (14%)
Query: 195 QIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNG 254
Q HA I+++ +++ ++ + L+ Y A+ V +++ + S+++++ +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 255 CSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSN 314
+++ +F M +G+ PD L ++ CA L++ + G Q H S V+GL V
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 315 ALVTFYGKCGNIEDSHRLFNEMNVRDE--------------------------------- 341
++ Y +CG + D+ ++F+ M+ +D
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 342 --VSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
VSW ++SG+ + G E + +F+K+ G PD+VT+ VL + + ++ GR
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 400 EIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCR---I 456
++K+ G+ + MID+ ++G + S N+ + A + R +
Sbjct: 276 GYVIKQ-GLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 457 HGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKD---- 512
+E+ + E +EL N S+ + + A GK +L R M+ GV+ +
Sbjct: 335 DKALEMFELFKEQTMEL---NVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391
Query: 513 ----PGCSWIK----------YKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVP 558
P C I + RVH+ S D +YA+ ++N I +P
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALID-MYAKCGRINLSQIVFNMMP 450
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 68/167 (40%), Gaps = 2/167 (1%)
Query: 295 TQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
TQ H R L +G + +S L+ Y D+ + + S+++L+ K
Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKA 94
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
++I +F +M SHGL PD L + C+ + G+ + G+
Sbjct: 95 KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVS-GLDMDAFV 153
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
M + R GR+ +A+ ++M D + + LL + G +E
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMS-DKDVVTCSALLCAYARKGCLE 199
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 477 bits (1227), Expect = e-133, Method: Compositional matrix adjust.
Identities = 237/569 (41%), Positives = 356/569 (62%), Gaps = 4/569 (0%)
Query: 83 LVDMYAKLGLIYDAKRGFDELP----EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKD 138
++ + A+ G + +AK ++ E ++ + N +I + G VE +R++F GM ++
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 139 SISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHA 198
+SW TMI +N +E EA+D+F EMR EG +FT SVL+ACG E K++H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 199 FIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEE 258
++ N++VG+AL+D+Y KC IK A VF +M K+ V+W++M+ GY QN EE
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 259 AVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVT 318
A+ ++ QR +E + FTL SVI +C+NLA+L EG Q H +G S + V+++ V
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306
Query: 319 FYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVT 378
Y KCG++ +S+ +F+E+ ++ W ++SG+AK + E + LFEKM G+ P+EVT
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366
Query: 379 LIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
+LS C GLVE+GR +F++M YG+ P HY+CM+DIL RAG L EA I +
Sbjct: 367 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 426
Query: 439 PFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVS 498
PF P A W +LL+SCR++ N+E+ + AAE L EL+P N ++VLLS+IYA+ +W+ ++
Sbjct: 427 PFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIA 486
Query: 499 QLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVP 558
+ R+ +R+ V+K G SWI K +VH FS + P +I + L+ L K K GY P
Sbjct: 487 KSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKP 546
Query: 559 DMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYIS 618
+ LHDVE+ +K ++L HSEKLA+ FGL+ +P P+R++KNLR+C DCH K S
Sbjct: 547 SVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAAS 606
Query: 619 KITQREILVRDAVRFHLFKNGECSCGDFW 647
T+R I+VRD RFH F +G CSCGDFW
Sbjct: 607 MATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 145 bits (367), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 174/347 (50%), Gaps = 36/347 (10%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG-RQIH 65
VSWN +I + + ++A+ ++ M +G S T S++L + C L +++H
Sbjct: 128 VSWNTMIGLYTRNRMESEALDIFLEMRNEGF-KFSEFTISSVL-SACGVNCDALECKKLH 185
Query: 66 GHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
+K ++VG+ L+D+YAK G+I DA + F+ + +K+ V +++M+ G +
Sbjct: 186 CLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYV------ 239
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
QN EA+ L+R + L +QFT SV+ AC
Sbjct: 240 -------------------------QNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACS 274
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
L AL EGKQ+HA I ++ NVFV S+ VDMY KC S++ + +F + KN+ W
Sbjct: 275 NLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNT 334
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT- 304
++ G+ ++ +E + +F MQ++G+ P++ T S++S C + +EEG +F T
Sbjct: 335 IISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTY 394
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSG 350
GL + + +V G+ G + +++ L + S W +L++
Sbjct: 395 GLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 441
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 122/250 (48%), Gaps = 36/250 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M V+W+ +++G+ + + +A+ +Y + L ++ T S+++ S+ +
Sbjct: 223 MQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQ-NQFTLSSVICACSNLAALIE 281
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H I K GFGS VFV S VDMYAK G + ++ F E+ EKN+ ++NT+I+G +
Sbjct: 282 GKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAK 341
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ +E + LF +M+ +G+ ++ TF S+
Sbjct: 342 -------------------------------HARPKEVMILFEKMQQDGMHPNEVTFSSL 370
Query: 181 LTACGGLLALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
L+ CG +EEG++ ++R + NV S +VD+ + + A + +++ +
Sbjct: 371 LSVCGHTGLVEEGRRFFK-LMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFD 429
Query: 239 NVVS-WTAML 247
S W ++L
Sbjct: 430 PTASIWGSLL 439
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 476 bits (1226), Expect = e-133, Method: Compositional matrix adjust.
Identities = 259/647 (40%), Positives = 376/647 (58%), Gaps = 33/647 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN +++G++ +G A+++ M ++ L S IT ++L S+ R + +
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENL-KPSFITIVSVLPAVSALRLISV 254
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G++IHG+ ++ GF S V + + LVDMYAK G +
Sbjct: 255 GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSL--------------------------- 287
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
E +R+LF GM +++ +SW +MI +QN +EA+ +F++M EG+ +
Sbjct: 288 ----ETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGA 343
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L LE G+ IH + NV V ++L+ MYCKCK + A S+F + + +
Sbjct: 344 LHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL 403
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW AM++G+ QNG +A+ F M+ ++PD FT SVI++ A L+ HG
Sbjct: 404 VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGV 463
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ + L + V+ ALV Y KCG I + +F+ M+ R +W A++ GY G
Sbjct: 464 VMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAA 523
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++LFE+M +KP+ VT + V+SACS +GLVE G F +M + Y I DHY M+D
Sbjct: 524 LELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVD 583
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAGRL EA FI +MP P + +L +C+IH NV + AAE L EL+P +
Sbjct: 584 LLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGY 643
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
+VLL++IY + W+ V Q+R +M +G+RK PGCS ++ K+ VH F + + P S +I
Sbjct: 644 HVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKI 703
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
YA LEKL + + GYVPD + VL VE K ++L+ HSEKLAI+FGLL G I V
Sbjct: 704 YAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHV 762
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC+DCHNATKYIS +T REI+VRD RFH FKNG CSCGD+W
Sbjct: 763 RKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/485 (27%), Positives = 237/485 (48%), Gaps = 39/485 (8%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V ++ ++ G A ++ A++ + M D + + F+ +L + + +G++IHG
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVV-YNFTYLLKVCGDEAELRVGKEIHG 159
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++K GF +F + L +MYAK R+ V E
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKC-----------------------------RQ--VNE 188
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+R++F M ++D +SW T++ G QNG+ R A+++ + M E L T SVL A
Sbjct: 189 ARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSA 248
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
L + GK+IH + +R+ V + +ALVDMY KC S++ A +F M +NVVSW +M
Sbjct: 249 LRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSM 308
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ Y QN +EA+ IF M G++P D ++ + +CA+L LE G H S+ GL
Sbjct: 309 IDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGL 368
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
++V N+L++ Y KC ++ + +F ++ R VSW A++ G+A+ G+ + ++ F +
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQ 428
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M S +KPD T + V++A + + + ++++ + + T ++D+ ++ G
Sbjct: 429 MRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFV-TTALVDMYAKCG 487
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD--PYNPASYVLL 484
+ A+ + M W ++ HG GK A E E+ P L
Sbjct: 488 AIMIARLIFDMMS-ERHVTTWNAMIDGYGTHG---FGKAALELFEEMQKGTIKPNGVTFL 543
Query: 485 SSIYA 489
S I A
Sbjct: 544 SVISA 548
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 176/325 (54%), Gaps = 1/325 (0%)
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMD 173
+++ R G V+E+ R+F + K ++ + TM+ G + +A+ F MR + +
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPV 134
Query: 174 QFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFR 233
+ F +L CG L GK+IH ++++ ++F + L +MY KC+ + A VF
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFD 194
Query: 234 TMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEE 293
M +++VSW ++ GY QNG + A+++ +M ++P T+ SV+ + + L +
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV 254
Query: 294 GTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAK 353
G + HG ++ +G S + +S ALV Y KCG++E + +LF+ M R+ VSW +++ Y +
Sbjct: 255 GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 354 FGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHD 413
E + +F+KML G+KP +V+++G L AC+ G +E+GR ++ V E G+
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSV-ELGLDRNVS 373
Query: 414 HYTCMIDILSRAGRLEEAKSFINKM 438
+I + + ++ A S K+
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKL 398
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 131/265 (49%), Gaps = 2/265 (0%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
+L+E +QI + +N F + LV ++C+ S+ A VF + K V + ML
Sbjct: 49 SLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLK 108
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
G+ + ++A++ F M+ + +EP + ++ C + A L G + HG + +G
Sbjct: 109 GFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSL 168
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
+ L Y KC + ++ ++F+ M RD VSW +V+GY++ G A +++ + M
Sbjct: 169 DLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMC 228
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
LKP +T++ VL A S L+ G+ ++ G + + T ++D+ ++ G L
Sbjct: 229 EENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRS-GFDSLVNISTALVDMYAKCGSL 287
Query: 429 EEAKSFINKMPFPPDAIGWATLLSS 453
E A+ + M + + W +++ +
Sbjct: 288 ETARQLFDGM-LERNVVSWNSMIDA 311
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/201 (18%), Positives = 90/201 (44%), Gaps = 3/201 (1%)
Query: 289 ASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALV 348
+SL+E Q GL LV+ + + G+++++ R+F ++ + V + ++
Sbjct: 48 SSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTML 107
Query: 349 SGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGI 408
G+AK ++ + F +M ++P +L C + G+ ++VK G
Sbjct: 108 KGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKS-GF 166
Query: 409 RPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
T + ++ ++ ++ EA+ ++MP D + W T+++ +G + +
Sbjct: 167 SLDLFAMTGLENMYAKCRQVNEARKVFDRMP-ERDLVSWNTIVAGYSQNGMARMALEMVK 225
Query: 469 SLLELDPYNPASYVLLSSIYA 489
S+ E + P+ ++S + A
Sbjct: 226 SMCE-ENLKPSFITIVSVLPA 245
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 476 bits (1225), Expect = e-133, Method: Compositional matrix adjust.
Identities = 241/648 (37%), Positives = 372/648 (57%), Gaps = 33/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D V++N LI+G+ G +++ ++ M + G S TFS +L L
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSG-HQPSDFTFSGVLKAVVGLHDFAL 268
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+Q+H + GF VG+ ++D Y+K
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSK------------------------------- 297
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
V E+R LF M + D +S+ +I+ Q ++ FREM+ G F F ++
Sbjct: 298 HDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATM 357
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+ L +L+ G+Q+H + + VG++LVDMY KC+ + AE +F+++ +
Sbjct: 358 LSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTT 417
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSWTA++ GY Q G +K+F M+ + + D T +V+ + A+ ASL G Q H
Sbjct: 418 VSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAF 477
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ +G + + + LV Y KCG+I+D+ ++F EM R+ VSW AL+S +A G
Sbjct: 478 IIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAA 537
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
I F KM+ GL+PD V+++GVL+ACS G VE+G YF+ M YGI P HY CM+D
Sbjct: 538 IGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLD 597
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPY-NPA 479
+L R GR EA+ +++MPF PD I W+++L++CRIH N + + AAE L ++ + A
Sbjct: 598 LLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAA 657
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
+YV +S+IYA+ G+W+ V +++ MRE+G++K P SW++ ++H+FS++D + P D+
Sbjct: 658 AYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDE 717
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
I ++ +L ++ +EGY PD SSV+ DV+ KI+ L +HSE+LA+AF L+ P G PI
Sbjct: 718 IVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIV 777
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V+KNLR C DCH A K ISKI +REI VRD RFH F G CSCGD+W
Sbjct: 778 VMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 185 bits (470), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 133/481 (27%), Positives = 228/481 (47%), Gaps = 40/481 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNL-SRITFSTMLIMSSSRRCVD 59
MP V+W +L+ +A + ++A K++ M + L +TF+T+L + +
Sbjct: 105 MPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQN 164
Query: 60 LGRQIHGHILKFGFGSYVF--VGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITG 117
Q+H +K GF + F V + L+ Y ++ + A F+E+PEK
Sbjct: 165 AVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEK----------- 213
Query: 118 LLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTF 177
DS+++ T+ITG ++GL E+I LF +MR G FTF
Sbjct: 214 --------------------DSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTF 253
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
VL A GL G+Q+HA + + VG+ ++D Y K + +F M
Sbjct: 254 SGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPE 313
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
+ VS+ ++ Y Q E ++ F MQ G + +F +++S ANL+SL+ G Q
Sbjct: 314 LDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQL 373
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H ++L+ S + V N+LV Y KC E++ +F + R VSWTAL+SGY + G
Sbjct: 374 HCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLH 433
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
+ LF KM L+ D+ T VL A + + G+ +++ + + +
Sbjct: 434 GAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSG-SG 492
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE--IGKWAA--ESLLEL 473
++D+ ++ G +++A +MP +A+ W L+S+ +G+ E IG +A ES L+
Sbjct: 493 LVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQP 551
Query: 474 D 474
D
Sbjct: 552 D 552
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 193/397 (48%), Gaps = 10/397 (2%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
R++ I+K GF + + +V+ + G + A++ +DE+P KN V NTMI+G ++
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAM-DQFTFGS 179
G V +R LF M D+ ++WT ++ +N EA LFR+M R + D TF +
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVF--VGSALVDMYCKCKSIKYAESVFRTMAW 237
+L C + Q+HAF ++ N F V + L+ YC+ + + A +F +
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
K+ V++ ++ GY ++G E++ +F M+++G +P DFT V+ + L G Q
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL 272
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H S+ TG +V N ++ FY K + ++ LF+EM D VS+ ++S Y++ +
Sbjct: 273 HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQY 332
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR--HYFEIMVKEYGIRPIHDHY 415
++ F +M G +LS + ++ GR H ++ I + +
Sbjct: 333 EASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGN-- 390
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
++D+ ++ EEA+ +P + W L+S
Sbjct: 391 -SLVDMYAKCEMFEEAELIFKSLP-QRTTVSWTALIS 425
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 473 bits (1217), Expect = e-132, Method: Compositional matrix adjust.
Identities = 250/656 (38%), Positives = 380/656 (57%), Gaps = 44/656 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+WN ++S + + +A++ M+ +G+ T S++L S + G+++
Sbjct: 266 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV-EPDEFTISSVLPACSHLEMLRTGKEL 324
Query: 65 HGHILKFG-FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
H + LK G FVGS LVDMY + +R FD + ++ I ++N MI G +
Sbjct: 325 HAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEH 384
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
+E+ LF GM++ GL + T V+ A
Sbjct: 385 DKEALLLFIGMEES------------------------------AGLLANSTTMAGVVPA 414
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
C A + IH F+++ + FV + L+DMY + I A +F M +++V+W
Sbjct: 415 CVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTW 474
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQ-----------RNGIEPDDFTLGSVISSCANLASLE 292
M+ GY + E+A+ + MQ R ++P+ TL +++ SCA L++L
Sbjct: 475 NTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALA 534
Query: 293 EGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYA 352
+G + H ++ L + + V +ALV Y KCG ++ S ++F+++ ++ ++W ++ Y
Sbjct: 535 KGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYG 594
Query: 353 KFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH 412
G E IDL M+ G+KP+EVT I V +ACS +G+V++G F +M +YG+ P
Sbjct: 595 MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSS 654
Query: 413 DHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIG-WATLLSSCRIHGNVEIGKWAAESLL 471
DHY C++D+L RAGR++EA +N MP + G W++LL + RIH N+EIG+ AA++L+
Sbjct: 655 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLI 714
Query: 472 ELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADD 531
+L+P + YVLL++IY+S G WD +++RR M+E+GVRK+PGCSWI++ VH F A D
Sbjct: 715 QLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGD 774
Query: 532 WSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLF 591
S P S+++ LE L +M KEGYVPD S VLH+VE EK +L HSEKLAIAFG+L
Sbjct: 775 SSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILN 834
Query: 592 IPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
PG IRV KNLRVC+DCH ATK+ISKI REI++RD RFH FKNG CSCGD+W
Sbjct: 835 TSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 193 bits (490), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 133/473 (28%), Positives = 228/473 (48%), Gaps = 55/473 (11%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRC-----VD 59
+ VSWN LIS S A++ + ML + N+ +F+ + ++++ +
Sbjct: 163 NQVSWNSLISSLCSFEKWEMALEAFRCMLDE---NVEPSSFTLVSVVTACSNLPMPEGLM 219
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+G+Q+H + L+ G + F+ + LV MY KLG +
Sbjct: 220 MGKQVHAYGLRKGELNS-FIINTLVAMYGKLGKL-------------------------- 252
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
S+ L +D ++W T+++ L QN EA++ REM LEG+ D+FT S
Sbjct: 253 -----ASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISS 307
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
VL AC L L GK++HA+ ++N D N FVGSALVDMYC CK + VF M +
Sbjct: 308 VLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDR 367
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN-GIEPDDFTLGSVISSCANLASLEEGTQF 297
+ W AM+ GY QN +EA+ +F M+ + G+ + T+ V+ +C +
Sbjct: 368 KIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAI 427
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
HG + GL V N L+ Y + G I+ + R+F +M RD V+W +++GY
Sbjct: 428 HGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHH 487
Query: 358 NETIDLFEKM------LSHG-----LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEY 406
+ + L KM +S G LKP+ +TL+ +L +C+ + KG+ +K
Sbjct: 488 EDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNN 547
Query: 407 GIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
+ + ++D+ ++ G L+ ++ +++P + I W ++ + +HGN
Sbjct: 548 LATDVAVG-SALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 208/452 (46%), Gaps = 45/452 (9%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
W L+ + +AV Y M+ G+ F +L + + ++LG+QIH H+
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGI-KPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 69 LKFGFG-SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEES 127
KFG+G V V + LV++Y K G + FD + E+N
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERN-------------------- 163
Query: 128 RRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGL 187
+SW ++I+ L A++ FR M E + FT SV+TAC L
Sbjct: 164 -----------QVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 212
Query: 188 L---ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L GKQ+HA+ +R N F+ + LV MY K + ++ + + +++V+W
Sbjct: 213 PMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWN 271
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
+L QN EA++ M G+EPD+FT+ SV+ +C++L L G + H +L
Sbjct: 272 TVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKN 331
Query: 305 GLI---SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
G + SF V +ALV Y C + R+F+ M R W A+++GY++ E +
Sbjct: 332 GSLDENSF--VGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEAL 389
Query: 362 DLFEKM-LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
LF M S GL + T+ GV+ AC R+G + +VK G+ ++D
Sbjct: 390 LLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR-GLDRDRFVQNTLMD 448
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ SR G+++ A KM D + W T+++
Sbjct: 449 MYSRLGKIDIAMRIFGKME-DRDLVTWNTMIT 479
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 127/261 (48%), Gaps = 23/261 (8%)
Query: 224 SIKYAESVF----RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLG 279
++ A S+F R+ W W +L ++ EAV + +M GI+PD++
Sbjct: 47 AVSGAPSIFISQSRSPEW-----WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFP 101
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGL-ISFITVSNALVTFYGKCGNIEDSHRLFNEMNV 338
+++ + A+L +E G Q H G + +TV+N LV Y KCG+ +++F+ ++
Sbjct: 102 ALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISE 161
Query: 339 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVE---KG 395
R++VSW +L+S F K ++ F ML ++P TL+ V++ACS + E G
Sbjct: 162 RNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMG 221
Query: 396 RHYFEIMVKEYGIRPIHDH---YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+ V YG+R + ++ + + G+L +K + D + W T+LS
Sbjct: 222 KQ-----VHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFG-GRDLVTWNTVLS 275
Query: 453 S-CRIHGNVEIGKWAAESLLE 472
S C+ +E ++ E +LE
Sbjct: 276 SLCQNEQLLEALEYLREMVLE 296
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 125/261 (47%), Gaps = 46/261 (17%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAV----KVYNLMLKDGLG------NLSRITFSTMLI 50
M D V+WN +I+G+ DA+ K+ NL K G + IT T+L
Sbjct: 466 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 525
Query: 51 MSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVM 110
++ + G++IH + +K + V VGS LVDMYAK G + +++ FD++P+KN++
Sbjct: 526 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT 585
Query: 111 YNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL 170
+N +I M G+ NG +EAIDL R M ++G+
Sbjct: 586 WNVII-----------------------------MAYGMHGNG--QEAIDLLRMMMVQGV 614
Query: 171 AMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYA 228
++ TF SV AC ++EG +I ++++ D+ + + + +VD+ + IK A
Sbjct: 615 KPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEA 673
Query: 229 ESVFRTMA--WKNVVSWTAML 247
+ M + +W+++L
Sbjct: 674 YQLMNMMPRDFNKAGAWSSLL 694
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 471 bits (1213), Expect = e-132, Method: Compositional matrix adjust.
Identities = 248/647 (38%), Positives = 378/647 (58%), Gaps = 37/647 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V+W L+I+ G +A++ + M+ G + + T S++ + + LG+Q+H
Sbjct: 235 VTWTLMITRCMQMGFPREAIRFFLDMVLSGFES-DKFTLSSVFSACAELENLSLGKQLHS 293
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
++ G V LVDMYAK G V++
Sbjct: 294 WAIRSGLVDDV--ECSLVDMYAKCSA----------------------------DGSVDD 323
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQN-GLEREAIDLFREMRLEG-LAMDQFTFGSVLTAC 184
R++F M+D +SWT +ITG M+N L EAI+LF EM +G + + FTF S AC
Sbjct: 324 CRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC 383
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G L GKQ+ + N V ++++ M+ K ++ A+ F +++ KN+VS+
Sbjct: 384 GNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYN 443
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
L G +N E+A K+ + + FT S++S AN+ S+ +G Q H + +
Sbjct: 444 TFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKL 503
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
GL V NAL++ Y KCG+I+ + R+FN M R+ +SWT++++G+AK G A ++ F
Sbjct: 504 GLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETF 563
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+M+ G+KP+EVT + +LSACS GLV +G +F M +++ I+P +HY CM+D+L R
Sbjct: 564 NQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCR 623
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
AG L +A FIN MPF D + W T L +CR+H N E+GK AA +LELDP PA+Y+ L
Sbjct: 624 AGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQL 683
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S+IYA GKW+ +++RR M+E+ + K+ GCSWI+ ++H F D + P + QIY EL
Sbjct: 684 SNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDEL 743
Query: 545 EKLNRKMIKEGYVPDMSSVLHDV----ELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
++L ++ + GYVPD VLH + + +EK ++L HSEK+A+AFGL+ P+RV
Sbjct: 744 DRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRV 803
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLRVC DCHNA KYIS ++ REI++RD RFH FK+G+CSC D+W
Sbjct: 804 FKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 136/461 (29%), Positives = 221/461 (47%), Gaps = 43/461 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSW+ +++ + ++G DA+KV+ L+ GL + ++ ++ S+ V +GR
Sbjct: 130 DVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP-NDYCYTAVIRACSNSDFVGVGRVT 188
Query: 65 HGHILKFG-FGSYVFVGSPLVDMYAK-LGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
G ++K G F S V VG L+DM+ K +A + FD++ E N+V
Sbjct: 189 LGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVV------------- 235
Query: 123 LVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLT 182
+WT MIT MQ G REAI F +M L G D+FT SV +
Sbjct: 236 ------------------TWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFS 277
Query: 183 ACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK---SIKYAESVFRTMAWKN 239
AC L L GKQ+H++ IR+ D+ V +LVDMY KC S+ VF M +
Sbjct: 278 ACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHS 335
Query: 240 VVSWTAMLVGYGQN-GCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQF 297
V+SWTA++ GY +N + EA+ +F M G +EP+ FT S +C NL+ G Q
Sbjct: 336 VMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQV 395
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
G++ GL S +V+N++++ + K +ED+ R F ++ ++ VS+ + G +
Sbjct: 396 LGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF 455
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
+ L ++ L T +LS + G + KG +VK G+
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVK-LGLSCNQPVCNA 514
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+I + S+ G ++ A N M + I W ++++ HG
Sbjct: 515 LISMYSKCGSIDTASRVFNFME-NRNVISWTSMITGFAKHG 554
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 219/455 (48%), Gaps = 46/455 (10%)
Query: 12 LISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILKF 71
LI H + G + AV +LM +DG+ + +TFS++L R LG+ +H +++F
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 72 GFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLF 131
E + V+YN++I+ + G ++ +F
Sbjct: 92 DI-------------------------------EPDSVLYNSLISLYSKSGDSAKAEDVF 120
Query: 132 RGMK---DKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
M+ +D +SW+ M+ NG E +AI +F E GL + + + +V+ AC
Sbjct: 121 ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSD 180
Query: 189 ALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCK-SIKYAESVFRTMAWKNVVSWTAM 246
+ G+ F+++ H + +V VG +L+DM+ K + S + A VF M+ NVV+WT M
Sbjct: 181 FVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLM 240
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ Q G EA++ F +M +G E D FTL SV S+CA L +L G Q H ++ +GL
Sbjct: 241 ITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL 300
Query: 307 ISFITVSNALVTFYGKC---GNIEDSHRLFNEMNVRDEVSWTALVSGYAK-FGKANETID 362
+ + S LV Y KC G+++D ++F+ M +SWTAL++GY K A E I+
Sbjct: 301 VDDVECS--LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAIN 358
Query: 363 LFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
LF +M++ G ++P+ T AC G+ K G+ +I +
Sbjct: 359 LFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR-GLASNSSVANSVISM 417
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLS-SCR 455
++ R+E+A+ + + + + T L +CR
Sbjct: 418 FVKSDRMEDAQRAFESLS-EKNLVSYNTFLDGTCR 451
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/475 (22%), Positives = 206/475 (43%), Gaps = 76/475 (16%)
Query: 1 MPFHDGVSWNLLISGHASHGSV-NDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD 59
M H +SW LI+G+ + ++ +A+ +++ M+ G + TFS+ +
Sbjct: 331 MEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPR 390
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
+G+Q+ G K G S N + N++I+ +
Sbjct: 391 VGKQVLGQAFKRGLAS-------------------------------NSSVANSVISMFV 419
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
+ +E+++R F + +K+ +S+ T + G +N +A L E+ L + FTF S
Sbjct: 420 KSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFAS 479
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+L+ + ++ +G+QIH+ +++ N V +AL+ MY KC SI A VF M +N
Sbjct: 480 LLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRN 539
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
V+SWT+M+ G+ ++G + ++ F M G++P++ T +++S+C+++ + EG +
Sbjct: 540 VISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFN 599
Query: 300 R------------------------SLVTGLISFITV----SNALV--TFYGKC---GNI 326
L+T FI ++ LV TF G C N
Sbjct: 600 SMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNT 659
Query: 327 E---DSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVL 383
E + R E++ + ++ L + YA GK E+ ++ KM L +
Sbjct: 660 ELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKE-------- 711
Query: 384 SACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
CS + +K ++ I+D +I + R G + + ++K+
Sbjct: 712 GGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKL 766
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 468 bits (1205), Expect = e-131, Method: Compositional matrix adjust.
Identities = 252/656 (38%), Positives = 380/656 (57%), Gaps = 43/656 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P D VS+N LISG+A A+ ++ M K G + T S ++ R VDL
Sbjct: 100 IPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGF-EVDGFTLSGLIAACCDR--VDL 156
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+Q+H + GF SY V + V Y+K
Sbjct: 157 IKQLHCFSVSGGFDSYSSVNNAFVTYYSK------------------------------- 185
Query: 121 RGLVEESRRLFRGMKD-KDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
GL+ E+ +F GM + +D +SW +MI Q+ +A+ L++EM +G +D FT S
Sbjct: 186 GGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLAS 245
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC---KSIKYAESVFRTMA 236
VL A L L G+Q H +I+ N VGS L+D Y KC + +E VF+ +
Sbjct: 246 VLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEIL 305
Query: 237 WKNVVSWTAMLVGYGQNG-CSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
++V W M+ GY N SEEAVK F MQR G PDD + V S+C+NL+S +
Sbjct: 306 SPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCK 365
Query: 296 QFHGRSLVTGLIS-FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
Q HG ++ + + S I+V+NAL++ Y K GN++D+ +F+ M + VS+ ++ GYA+
Sbjct: 366 QIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQH 425
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G E + L+++ML G+ P+++T + VLSAC+ G V++G+ YF M + + I P +H
Sbjct: 426 GHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEH 485
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
Y+CMID+L RAG+LEEA+ FI+ MP+ P ++ WA LL +CR H N+ + + AA L+ +
Sbjct: 486 YSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQ 545
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS 534
P YV+L+++YA KW+ ++ +R++MR K +RK PGCSWI+ K + H+F A+DWS
Sbjct: 546 PLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSH 605
Query: 535 PYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKM---LNHHSEKLAIAFGLLF 591
P ++ LE++ +KM K GYV D + + + + L HHSEKLA+AFGL+
Sbjct: 606 PMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMS 665
Query: 592 IPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G + VVKNLR+C DCHNA K++S + REI+VRD +RFH FK+G+CSCGD+W
Sbjct: 666 TRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 229/470 (48%), Gaps = 11/470 (2%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
TF +L+ S + R + G+ +H +K S ++ + V++Y+K G + A+ F
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
E N+ YN ++ + + +R+LF + D++S+ T+I+G A+ LF+
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
MR G +D FT ++ AC + L KQ+H F + V +A V Y K
Sbjct: 130 RMRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGG 187
Query: 224 SIKYAESVFRTM-AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
++ A SVF M ++ VSW +M+V YGQ+ +A+ ++ M G + D FTL SV+
Sbjct: 188 LLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIE---DSHRLFNEMNVR 339
++ +L L G QFHG+ + G V + L+ FY KCG + DS ++F E+
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSP 307
Query: 340 DEVSWTALVSGYAKFGK-ANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHY 398
D V W ++SGY+ + + E + F +M G +PD+ + + V SACS + +
Sbjct: 308 DLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQI 367
Query: 399 FEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ +K + +I + ++G L++A+ ++MP +A+ + ++ HG
Sbjct: 368 HGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP-ELNAVSFNCMIKGYAQHG 426
Query: 459 NVEIGKWAAESLLE--LDPYNPASYVLLSSIYASKGKWDHVSQLRRTMRE 506
+ + +L+ + P N ++V + S A GK D + TM+E
Sbjct: 427 HGTEALLLYQRMLDSGIAP-NKITFVAVLSACAHCGKVDEGQEYFNTMKE 475
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 468 bits (1203), Expect = e-131, Method: Compositional matrix adjust.
Identities = 245/634 (38%), Positives = 369/634 (58%), Gaps = 66/634 (10%)
Query: 49 LIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNI 108
L + + R + + +H HI+K G + + LV++Y K G A + FDE+P +
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHR-- 67
Query: 109 VMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE 168
D I+W +++T L Q L + + +F +
Sbjct: 68 -----------------------------DHIAWASVLTALNQANLSGKTLSVFSSVGSS 98
Query: 169 G-LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY 227
L D F F +++ AC L +++ G+Q+H I +++ ++ V S+LVDMY KC +
Sbjct: 99 SGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNS 158
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVK-------------------------- 261
A++VF ++ KN +SWTAM+ GY ++G EEA++
Sbjct: 159 AKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKG 218
Query: 262 -----IFCNMQRNGIEP-DDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNA 315
+F M+R ++ D L S++ +CANLA+ G Q HG + G S + +SNA
Sbjct: 219 LEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNA 278
Query: 316 LVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPD 375
L+ Y KC ++ + +F+ M RD VSWT+L+ G A+ G+A + + L++ M+SHG+KP+
Sbjct: 279 LIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPN 338
Query: 376 EVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFI 435
EVT +G++ ACS G VEKGR F+ M K+YGIRP HYTC++D+L R+G L+EA++ I
Sbjct: 339 EVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLI 398
Query: 436 NKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLL-ELDPYNPASYVLLSSIYASKGKW 494
+ MPFPPD WA LLS+C+ G ++G A+ L+ +P++Y+LLS+IYAS W
Sbjct: 399 HTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLW 458
Query: 495 DHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKM-IK 553
VS+ RR + E VRKDPG S ++ + +F A + S P + I+ L+KL +M I+
Sbjct: 459 GKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIR 518
Query: 554 EGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNA 613
GYVPD S +LHD++ EK K+L HSE+ A+A+GLL PG PIR+VKNLRVC DCH
Sbjct: 519 NGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVV 578
Query: 614 TKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
K+IS+IT+REI+VRDA R+H FK G+CSC DFW
Sbjct: 579 LKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 196 bits (497), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 210/402 (52%), Gaps = 6/402 (1%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D ++W +++ + V++ + FS ++ ++ +D
Sbjct: 64 MPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDH 123
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQ+H H + + + V S LVDMYAK GL+ AK FD + KN + + M++G +
Sbjct: 124 GRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAK 183
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL-AMDQFTFGS 179
G EE+ LFR + K+ SWT +I+G +Q+G EA +F EMR E + +D S
Sbjct: 184 SGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSS 243
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
++ AC L A G+Q+H +I VF+ +AL+DMY KC + A+ +F M ++
Sbjct: 244 IVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRD 303
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FH 298
VVSWT+++VG Q+G +E+A+ ++ +M +G++P++ T +I +C+++ +E+G + F
Sbjct: 304 VVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQ 363
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNV-RDEVSWTALVSGYAKFGKA 357
+ G+ + L+ G+ G ++++ L + M DE +W AL+S + G+
Sbjct: 364 SMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRG 423
Query: 358 NETIDLFEKMLSHGLKPDEVTLI---GVLSACSRAGLVEKGR 396
I + + ++S D T I + ++ S G V + R
Sbjct: 424 QMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEAR 465
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 466 bits (1198), Expect = e-130, Method: Compositional matrix adjust.
Identities = 249/649 (38%), Positives = 370/649 (57%), Gaps = 38/649 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D SWN +ISG+ G+ +A L L +GL + +T ++L + +
Sbjct: 211 MPVRDMGSWNAMISGYCQSGNAKEA-----LTLSNGLRAMDSVTVVSLLSACTEAGDFNR 265
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G IH + +K G S +FV + L+D+YA+ G + D ++ FD
Sbjct: 266 GVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDR------------------ 307
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
M +D ISW ++I N AI LF+EMRL + D T S+
Sbjct: 308 -------------MYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISL 354
Query: 181 LTACGGLLALEEGKQIHAFIIRND-HKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
+ L + + + F +R +++ +G+A+V MY K + A +VF + +
Sbjct: 355 ASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTD 414
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQFH 298
V+SW ++ GY QNG + EA++++ M+ G I + T SV+ +C+ +L +G + H
Sbjct: 415 VISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLH 474
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
GR L GL + V +L YGKCG +ED+ LF ++ + V W L++ + G
Sbjct: 475 GRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGE 534
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCM 418
+ + LF++ML G+KPD +T + +LSACS +GLV++G+ FE+M +YGI P HY CM
Sbjct: 535 KAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCM 594
Query: 419 IDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
+D+ RAG+LE A FI M PDA W LLS+CR+HGNV++GK A+E L E++P +
Sbjct: 595 VDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHV 654
Query: 479 ASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSD 538
+VLLS++YAS GKW+ V ++R KG+RK PG S ++ ++V +F + + P +
Sbjct: 655 GYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYE 714
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
++Y EL L K+ GYVPD VL DVE EK +L HSE+LAIAF L+ P I
Sbjct: 715 EMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTI 774
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
R+ KNLRVC DCH+ TK+ISKIT+REI+VRD+ RFH FKNG CSCGD+W
Sbjct: 775 RIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 175/349 (50%), Gaps = 11/349 (3%)
Query: 106 KNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM 165
+N+ + ++ G V +R F ++++D +W MI+G + G E I F
Sbjct: 84 QNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF 143
Query: 166 RL-EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
L GL D TF SVL AC ++ +G +IH ++ +V+V ++L+ +Y + K+
Sbjct: 144 MLSSGLTPDYRTFPSVLKACRTVI---DGNKIHCLALKFGFMWDVYVAASLIHLYSRYKA 200
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEP-DDFTLGSVIS 283
+ A +F M +++ SW AM+ GY Q+G ++EA+ + NG+ D T+ S++S
Sbjct: 201 VGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLS 255
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+C G H S+ GL S + VSN L+ Y + G + D ++F+ M VRD +S
Sbjct: 256 ACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLIS 315
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
W +++ Y + I LF++M ++PD +TLI + S S+ G + R +
Sbjct: 316 WNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTL 375
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
++ ++ + ++ G ++ A++ N +P D I W T++S
Sbjct: 376 RKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP-NTDVISWNTIIS 423
Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 141/266 (53%), Gaps = 12/266 (4%)
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
L+ K +HA ++ + NV + + LV++YC ++ A F + ++V +W M+ G
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 250 YGQNGCSEEAVKIFC-NMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
YG+ G S E ++ F M +G+ PD T SV+ +C + +G + H +L G +
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVI---DGNKIHCLALKFGFMW 183
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
+ V+ +L+ Y + + ++ LF+EM VRD SW A++SGY + G A E + L
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL-----TL 238
Query: 369 SHGLKP-DEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
S+GL+ D VT++ +LSAC+ AG +G +K +G+ +ID+ + GR
Sbjct: 239 SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIK-HGLESELFVSNKLIDLYAEFGR 297
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSS 453
L + + ++M + D I W +++ +
Sbjct: 298 LRDCQKVFDRM-YVRDLISWNSIIKA 322
Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 98/223 (43%), Gaps = 16/223 (7%)
Query: 268 RNGIEPDDFT-LGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNI 326
+NG E + + ++ C NL S H R +V+ I + +S LV Y GN+
Sbjct: 46 KNGNESKEIDDVHTLFRYCTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNV 102
Query: 327 EDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK-MLSHGLKPDEVTLIGVLSA 385
+ F+ + RD +W ++SGY + G ++E I F MLS GL PD T VL A
Sbjct: 103 ALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKA 162
Query: 386 CSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC--MIDILSRAGRLEEAKSFINKMPFPPD 443
C V G + +K +G + D Y +I + SR + A+ ++MP D
Sbjct: 163 CRT---VIDGNKIHCLALK-FGF--MWDVYVAASLIHLYSRYKAVGNARILFDEMPV-RD 215
Query: 444 AIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
W ++S GN + + L +D S LLS+
Sbjct: 216 MGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVS--LLSA 256
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 465 bits (1197), Expect = e-130, Method: Compositional matrix adjust.
Identities = 246/647 (38%), Positives = 372/647 (57%), Gaps = 42/647 (6%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
+S N LI G + A++V + + S+ T+ +++ R + ++H
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQE-----SSPSQQTYELLILCCGHRSSLSDALRVHR 101
Query: 67 HILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEE 126
HIL G F+ + L+ MY+ LG + A++ FD+ ++ I +
Sbjct: 102 HILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYV---------------- 145
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
W + L G E + L+ +M G+ D+FT+ VL AC
Sbjct: 146 ---------------WNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVA 190
Query: 187 ----LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVS 242
+ L +GK+IHA + R + +V++ + LVDMY + + YA VF M +NVVS
Sbjct: 191 SECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVS 250
Query: 243 WTAMLVGYGQNGCSEEAVKIFCNMQRNGIE--PDDFTLGSVISSCANLASLEEGTQFHGR 300
W+AM+ Y +NG + EA++ F M R + P+ T+ SV+ +CA+LA+LE+G HG
Sbjct: 251 WSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGY 310
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
L GL S + V +ALVT YG+CG +E R+F+ M+ RD VSW +L+S Y G +
Sbjct: 311 ILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKA 370
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
I +FE+ML++G P VT + VL ACS GLVE+G+ FE M +++GI+P +HY CM+D
Sbjct: 371 IQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVD 430
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RA RL+EA + M P W +LL SCRIHGNVE+ + A+ L L+P N +
Sbjct: 431 LLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGN 490
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLL+ IYA WD V ++++ + +G++K PG W++ + +++ F + D +P +QI
Sbjct: 491 YVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQI 550
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
+A L KL M ++GY+P VL+++E EK +++ HSEKLA+AFGL+ G PIR+
Sbjct: 551 HAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRI 610
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLR+C DCH TK+ISK ++EILVRD RFH FKNG CSCGD+W
Sbjct: 611 TKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 82.8 bits (203), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 114/238 (47%), Gaps = 35/238 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGL-GNLSRITFSTMLIMSSSRRCVD 59
MP + VSW+ +I+ +A +G +A++ + M+++ + + +T ++L +S ++
Sbjct: 243 MPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALE 302
Query: 60 LGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLL 119
G+ IHG+IL+ G S + V S LV MY + G + +R FD + ++++V
Sbjct: 303 QGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVV---------- 352
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
SW ++I+ +G ++AI +F EM G + TF S
Sbjct: 353 ---------------------SWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVS 391
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
VL AC +EEGK++ + R DH K + + +VD+ + + A + + M
Sbjct: 392 VLGACSHEGLVEEGKRLFETMWR-DHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDM 448
Score = 37.7 bits (86), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D VSWN LIS + HG A++++ ML +G + + +TF ++L S V+ G+++
Sbjct: 350 DVVSWNSLISSYGVHGYGKKAIQIFEEMLANG-ASPTPVTFVSVLGACSHEGLVEEGKRL 408
Query: 65 HGHILK-FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL-PEKNIVMYNTMITGLLRRG 122
+ + G + + +VD+ + + +A + ++ E ++ +++ G
Sbjct: 409 FETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHG 468
Query: 123 LVE----ESRRLF 131
VE SRRLF
Sbjct: 469 NVELAERASRRLF 481
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 462 bits (1190), Expect = e-129, Method: Compositional matrix adjust.
Identities = 248/647 (38%), Positives = 373/647 (57%), Gaps = 46/647 (7%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
+ VS +IS +A G ++ AV +++ ML G S + ++T+L + R +D GRQI
Sbjct: 148 NAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSM-YTTLLKSLVNPRALDFGRQI 206
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H H+++ G S + + +V+MY K G + AKR FD+
Sbjct: 207 HAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQ---------------------- 244
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
M K ++ T ++ G Q G R+A+ LF ++ EG+ D F F VL AC
Sbjct: 245 ---------MAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKAC 295
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L L GKQIHA + + + V VG+ LVD Y KC S + A F+ + N VSW+
Sbjct: 296 ASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWS 355
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQ-RNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
A++ GY Q EEAVK F +++ +N + FT S+ +C+ LA G Q H ++
Sbjct: 356 AIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIK 415
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
LI +AL+T Y KCG ++D++ +F M+ D V+WTA +SG+A +G A+E + L
Sbjct: 416 RSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRL 475
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILS 423
FEKM+S G+KP+ VT I VL+ACS AGLVE+G+H + M+++Y + P DHY CMIDI +
Sbjct: 476 FEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYA 535
Query: 424 RAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVL 483
R+G L+EA F+ MPF PDA+ W LS C H N+E+G+ A E L +LDP + A YVL
Sbjct: 536 RSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVL 595
Query: 484 LSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAE 543
++Y GKW+ +++ + M E+ ++K+ CSWI+ K ++H F D P + +IY +
Sbjct: 596 PFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEK 655
Query: 544 LEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFI---PPGLPIRV 600
L++ + G+ M + ++E+ + L HSE+LAIAFGL+ + P PI+V
Sbjct: 656 LKEFD------GF---MEGDMFQCNMTERREQLLDHSERLAIAFGLISVHGNAPA-PIKV 705
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
KNLR C DCH K++S +T EI++RD+ RFH FK G+CSC D+W
Sbjct: 706 FKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 204/452 (45%), Gaps = 35/452 (7%)
Query: 10 NLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHIL 69
NL + + H +N+A + M K G+ ++S ++ + R + GR +H +
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMDKAGV-SVSSYSYQCLFEACRELRSLSHGRLLHDRMR 110
Query: 70 KFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRR 129
V + + ++ MY + + DA + FDE+ E N
Sbjct: 111 MGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELN---------------------- 148
Query: 130 LFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLA 189
++S TTMI+ + G+ +A+ LF M G + ++L + A
Sbjct: 149 ---------AVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRA 199
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVG 249
L+ G+QIHA +IR N + + +V+MY KC + A+ VF MA K V+ T ++VG
Sbjct: 200 LDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVG 259
Query: 250 YGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISF 309
Y Q G + +A+K+F ++ G+E D F V+ +CA+L L G Q H GL S
Sbjct: 260 YTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESE 319
Query: 310 ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS 369
++V LV FY KC + E + R F E+ ++VSW+A++SGY + + E + F+ + S
Sbjct: 320 VSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRS 379
Query: 370 HGLKP-DEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
+ T + ACS G +K I + + +I + S+ G L
Sbjct: 380 KNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGE-SALITMYSKCGCL 438
Query: 429 EEAKSFINKMPFPPDAIGWATLLSSCRIHGNV 460
++A M PD + W +S +GN
Sbjct: 439 DDANEVFESMD-NPDIVAWTAFISGHAYYGNA 469
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 462 bits (1190), Expect = e-129, Method: Compositional matrix adjust.
Identities = 250/648 (38%), Positives = 366/648 (56%), Gaps = 34/648 (5%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P + VSW LISG A +G + A+ + M ++G+ + TF +S R G
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVP-NDFTFPCAFKAVASLRLPVTG 127
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+QIH +K G VFVG DMY K L DA++ FDE+PE
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPE---------------- 171
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
++ +W I+ + +G REAI+ F E R + TF + L
Sbjct: 172 ---------------RNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFL 216
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
AC L L G Q+H ++R+ +V V + L+D Y KCK I+ +E +F M KN V
Sbjct: 217 NACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAV 276
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW +++ Y QN E+A ++ +++ +E DF + SV+S+CA +A LE G H +
Sbjct: 277 SWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHA 336
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
+ + I V +ALV YGKCG IEDS + F+EM ++ V+ +L+ GYA G+ + +
Sbjct: 337 VKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMAL 396
Query: 362 DLFEKMLSHGL--KPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
LFE+M G P+ +T + +LSACSRAG VE G F+ M YGI P +HY+C++
Sbjct: 397 ALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIV 456
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L RAG +E A FI KMP P W L ++CR+HG ++G AAE+L +LDP +
Sbjct: 457 DMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSG 516
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQ 539
++VLLS+ +A+ G+W + +R ++ G++K G SWI K++VH F A D S + +
Sbjct: 517 NHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKE 576
Query: 540 IYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
I L KL +M GY PD+ L+D+E EK ++HHSEKLA+AFGLL +P +PIR
Sbjct: 577 IQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIR 636
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ KNLR+C DCH+ K++S +REI+VRD RFH FK+G CSC D+W
Sbjct: 637 ITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 195/411 (47%), Gaps = 41/411 (9%)
Query: 30 NLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHILK-FGFGSYVFVGSPLVDMYA 88
+L+ D LG L + S +SS R LGR +H I+K F+ + L++MY+
Sbjct: 2 SLLSADALGLLLKNAIS-----ASSMR---LGRVVHARIVKTLDSPPPPFLANYLINMYS 53
Query: 89 KLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITG 148
KL + PE +R + R ++ +SWT++I+G
Sbjct: 54 KL-----------DHPES--------------------ARLVLRLTPARNVVSWTSLISG 82
Query: 149 LMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDN 208
L QNG A+ F EMR EG+ + FTF A L GKQIHA ++ +
Sbjct: 83 LAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILD 142
Query: 209 VFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR 268
VFVG + DMYCK + A +F + +N+ +W A + +G EA++ F +R
Sbjct: 143 VFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRR 202
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIED 328
P+ T + +++C++ L G Q HG L +G + ++V N L+ FYGKC I
Sbjct: 203 IDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRS 262
Query: 329 SHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
S +F EM ++ VSW +LV+ Y + + + L+ + ++ + + VLSAC+
Sbjct: 263 SEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAG 322
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP 439
+E GR VK R I + ++D+ + G +E+++ ++MP
Sbjct: 323 MAGLELGRSIHAHAVKACVERTIFVG-SALVDMYGKCGCIEDSEQAFDEMP 372
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSR-ITFSTMLIMSSSRRCVD 59
MP + V+ N LI G+A G V+ A+ ++ M G G +TF ++L S V+
Sbjct: 371 MPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVE 430
Query: 60 LGRQIHGHILK-FGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
G +I + +G S +VDM + G++ A ++P
Sbjct: 431 NGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMP 476
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 460 bits (1183), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/605 (38%), Positives = 361/605 (59%), Gaps = 33/605 (5%)
Query: 45 FSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
+ +L +R + G+++H H++K + ++ + L+ Y K + DA++ DE+P
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
E K+ +SWT MI+ Q G EA+ +F E
Sbjct: 115 E-------------------------------KNVVSWTAMISRYSQTGHSSEALTVFAE 143
Query: 165 MRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
M ++FTF +VLT+C L GKQIH I++ ++ ++FVGS+L+DMY K
Sbjct: 144 MMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQ 203
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
IK A +F + ++VVS TA++ GY Q G EEA+++F + G+ P+ T S++++
Sbjct: 204 IKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTA 263
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
+ LA L+ G Q H L L + + N+L+ Y KCGN+ + RLF+ M R +SW
Sbjct: 264 LSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISW 323
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHG-LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
A++ GY+K G E ++LF M +KPD VTL+ VLS CS + + G + F+ MV
Sbjct: 324 NAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMV 383
Query: 404 K-EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
EYG +P +HY C++D+L RAGR++EA FI +MP P A +LL +CR+H +V+I
Sbjct: 384 AGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDI 443
Query: 463 GKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKS 522
G+ L+E++P N +YV+LS++YAS G+W V+ +R M +K V K+PG SWI+++
Sbjct: 444 GESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQ 503
Query: 523 RVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEK 582
+H F A+D + P +++ A++++++ KM + GYVPD+S VL+DV+ +K KML HSEK
Sbjct: 504 TLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEK 563
Query: 583 LAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECS 642
LA+ FGL+ G+PIRV KNLR+C DCHN K SK+ +RE+ +RD RFH +G CS
Sbjct: 564 LALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICS 623
Query: 643 CGDFW 647
CGD+W
Sbjct: 624 CGDYW 628
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 169/314 (53%), Gaps = 7/314 (2%)
Query: 146 ITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH 205
I+ L NG +EA+ EM + G M + ++L AC AL +G+++HA +I+ +
Sbjct: 27 ISQLCSNGRLQEAL---LEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRY 83
Query: 206 KDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCN 265
++ + L+ Y KC ++ A V M KNVVSWTAM+ Y Q G S EA+ +F
Sbjct: 84 LPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAE 143
Query: 266 MQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGN 325
M R+ +P++FT +V++SC + L G Q HG + S I V ++L+ Y K G
Sbjct: 144 MMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQ 203
Query: 326 IEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSA 385
I+++ +F + RD VS TA+++GYA+ G E +++F ++ S G+ P+ VT +L+A
Sbjct: 204 IKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTA 263
Query: 386 CSRAGLVEKGRH-YFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDA 444
S L++ G+ + ++ +E + + +ID+ S+ G L A+ + MP A
Sbjct: 264 LSGLALLDHGKQAHCHVLRRELPFYAVLQN--SLIDMYSKCGNLSYARRLFDNMP-ERTA 320
Query: 445 IGWATLLSSCRIHG 458
I W +L HG
Sbjct: 321 ISWNAMLVGYSKHG 334
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 459 bits (1180), Expect = e-128, Method: Compositional matrix adjust.
Identities = 253/650 (38%), Positives = 367/650 (56%), Gaps = 47/650 (7%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN +ISG G +N AVK++ D + S ++++ M
Sbjct: 92 MPVRDVVSWNSMISGCVECGDMNTAVKLF-----DEMPERSVVSWTAM------------ 134
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
V+ + G + A+R F ++P K+ +N+M+ G L+
Sbjct: 135 -----------------------VNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQ 171
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G V+++ +LF+ M K+ ISWTTMI GL QN EA+DLF+ M + F V
Sbjct: 172 FGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCV 231
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+TAC A G Q+H II+ +V ++L+ Y CK I + VF + V
Sbjct: 232 ITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQV 291
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
WTA+L GY N E+A+ IF M RN I P+ T S ++SC+ L +L+ G + HG
Sbjct: 292 AVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGV 351
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
++ GL + V N+LV Y GN+ D+ +F ++ + VSW +++ G A+ G+
Sbjct: 352 AVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWA 411
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIH---DHYTC 417
+F +M+ +PDE+T G+LSACS G +EKGR F M GI I HYTC
Sbjct: 412 FVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYM--SSGINHIDRKIQHYTC 469
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
M+DIL R G+L+EA+ I +M P+ + W LLS+CR+H +V+ G+ AA ++ LD +
Sbjct: 470 MVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKS 529
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYS 537
A+YVLLS+IYAS G+W +VS+LR M++ G+ K PG SW+ + + H F + D P+
Sbjct: 530 SAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGD--QPHC 587
Query: 538 DQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP 597
+IY +LE L K+ + GY PD S LHDVE +K +ML +HSE+LAIAFGL+ G
Sbjct: 588 SRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSA 647
Query: 598 IRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ V+KNLRVC DCH K IS + REI++RD +RFH FKNG CSCGD+W
Sbjct: 648 VTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 190/377 (50%), Gaps = 19/377 (5%)
Query: 93 IYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQN 152
I +A+ F+++P ++ +Y MITG R + ++ LF M +D +SW +MI+G ++
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVEC 110
Query: 153 GLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGK--QIHAFIIRNDHKDNVF 210
G A+ LF EM + ++ +++ C GK Q + KD
Sbjct: 111 GDMNTAVKLFDEMPERSVV----SWTAMVNGC-----FRSGKVDQAERLFYQMPVKDTA- 160
Query: 211 VGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
+++V Y + + A +F+ M KNV+SWT M+ G QN S EA+ +F NM R
Sbjct: 161 AWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCC 220
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
I+ VI++CAN + G Q HG + G + VS +L+TFY C I DS
Sbjct: 221 IKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSR 280
Query: 331 RLFNEMNVRDEVS-WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
++F+E V ++V+ WTAL+SGY+ K + + +F ML + + P++ T L++CS
Sbjct: 281 KVFDE-KVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSAL 339
Query: 390 GLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWAT 449
G ++ G+ + VK G+ ++ + S +G + +A S K+ F + W +
Sbjct: 340 GTLDWGKEMHGVAVK-LGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNS 397
Query: 450 LLSSCRIHGNVEIGKWA 466
++ C HG GKWA
Sbjct: 398 IIVGCAQHGR---GKWA 411
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 450 bits (1157), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/608 (37%), Positives = 363/608 (59%), Gaps = 36/608 (5%)
Query: 42 RITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFD 101
R ++T+L + + + GR +H HIL+ F + +G+ L++MYAK
Sbjct: 60 RRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC----------- 108
Query: 102 ELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDL 161
G +EE+R++F M +D ++WTT+I+G Q+ +A+
Sbjct: 109 --------------------GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLF 148
Query: 162 FREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK 221
F +M G + ++FT SV+ A G Q+H F ++ NV VGSAL+D+Y +
Sbjct: 149 FNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTR 208
Query: 222 CKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
+ A+ VF + +N VSW A++ G+ + +E+A+++F M R+G P F+ S+
Sbjct: 209 YGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASL 268
Query: 282 ISSCANLASLEEGTQFHGRSLVTG--LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
+C++ LE+G H + +G L++F N L+ Y K G+I D+ ++F+ + R
Sbjct: 269 FGACSSTGFLEQGKWVHAYMIKSGEKLVAF--AGNTLLDMYAKSGSIHDARKIFDRLAKR 326
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
D VSW +L++ YA+ G E + FE+M G++P+E++ + VL+ACS +GL+++G HY+
Sbjct: 327 DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYY 386
Query: 400 EIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN 459
E+M K+ GI P HY ++D+L RAG L A FI +MP P A W LL++CR+H N
Sbjct: 387 ELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKN 445
Query: 460 VEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIK 519
E+G +AAE + ELDP +P +V+L +IYAS G+W+ +++R+ M+E GV+K+P CSW++
Sbjct: 446 TELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVE 505
Query: 520 YKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHH 579
++ +H+F A+D P ++I + E++ K+ + GYVPD S V+ V+ E+ L +H
Sbjct: 506 IENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYH 565
Query: 580 SEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNG 639
SEK+A+AF LL PPG I + KN+RVC DCH A K SK+ REI+VRD RFH FK+G
Sbjct: 566 SEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDG 625
Query: 640 ECSCGDFW 647
CSC D+W
Sbjct: 626 NCSCKDYW 633
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 181/351 (51%), Gaps = 33/351 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V+W LISG++ H DA+ +N ML+ G + T S+++ +++ R
Sbjct: 121 MPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSP-NEFTLSSVIKAAAAERRGCC 179
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+HG +K GF S V VGS L+D+Y R
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYT-------------------------------R 208
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
GL+++++ +F ++ ++ +SW +I G + +A++LF+ M +G F++ S+
Sbjct: 209 YGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASL 268
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
AC LE+GK +HA++I++ K F G+ L+DMY K SI A +F +A ++V
Sbjct: 269 FGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDV 328
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW ++L Y Q+G +EAV F M+R GI P++ + SV+++C++ L+EG ++
Sbjct: 329 VSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYEL 388
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSG 350
G++ +V G+ G++ + R EM + + W AL++
Sbjct: 389 MKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 439
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 167/306 (54%), Gaps = 4/306 (1%)
Query: 167 LEG--LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS 224
LEG + D+ + ++L C L +G+ +HA I+++ + ++ +G+ L++MY KC S
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
++ A VF M ++ V+WT ++ GY Q+ +A+ F M R G P++FTL SVI +
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
A G Q HG + G S + V +AL+ Y + G ++D+ +F+ + R++VSW
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
AL++G+A+ + ++LF+ ML G +P + + ACS G +E+G+ M+K
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGK 464
G + + ++D+ +++G + +A+ +++ D + W +LL++ HG +
Sbjct: 291 S-GEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQHGFGKEAV 348
Query: 465 WAAESL 470
W E +
Sbjct: 349 WWFEEM 354
Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 113/246 (45%), Gaps = 14/246 (5%)
Query: 265 NMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCG 324
+++ + I D +++ C L +G H L + I + N L+ Y KCG
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 325 NIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVL- 383
++E++ ++F +M RD V+WT L+SGY++ + + + F +ML G P+E TL V+
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169
Query: 384 -SACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPP 442
+A R G H F + G + ++D+ +R G +++A+ + +
Sbjct: 170 AAAAERRGCCGHQLHGFCVKC---GFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRN 226
Query: 443 DAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA--SYVLL-----SSIYASKGKWD 495
D + W L++ E + +L D + P+ SY L S+ + +GKW
Sbjct: 227 D-VSWNALIAGHARRSGTEKALELFQGMLR-DGFRPSHFSYASLFGACSSTGFLEQGKWV 284
Query: 496 HVSQLR 501
H ++
Sbjct: 285 HAYMIK 290
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 449 bits (1156), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/604 (37%), Positives = 361/604 (59%), Gaps = 36/604 (5%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
T+S ++ S R V G I H+ G +F+ + L++MY K L+ DA
Sbjct: 63 TYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDA------- 115
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
+LF M ++ ISWTTMI+ + + ++A++L
Sbjct: 116 ------------------------HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLV 151
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCK 223
M + + + +T+ SVL +C G+ + + +H II+ + +VFV SAL+D++ K
Sbjct: 152 LMLRDNVRPNVYTYSSVLRSCNGM---SDVRMLHCGIIKEGLESDVFVRSALIDVFAKLG 208
Query: 224 SIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVIS 283
+ A SVF M + + W +++ G+ QN S+ A+++F M+R G + TL SV+
Sbjct: 209 EPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLR 268
Query: 284 SCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
+C LA LE G Q H + + ++NALV Y KCG++ED+ R+FN+M RD ++
Sbjct: 269 ACTGLALLELGMQAHVH--IVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVIT 326
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
W+ ++SG A+ G + E + LFE+M S G KP+ +T++GVL ACS AGL+E G +YF M
Sbjct: 327 WSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMK 386
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
K YGI P+ +HY CMID+L +AG+L++A +N+M PDA+ W TLL +CR+ N+ +
Sbjct: 387 KLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLA 446
Query: 464 KWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSR 523
++AA+ ++ LDP + +Y LLS+IYA+ KWD V ++R MR++G++K+PGCSWI+ +
Sbjct: 447 EYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQ 506
Query: 524 VHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKL 583
+H F D S P ++ +L +L ++ GYVP+ + VL D+E + L HHSEKL
Sbjct: 507 IHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKL 566
Query: 584 AIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSC 643
A+AFGL+ +P IR+ KNLR+C DCH K SK+ R I++RD +R+H F++G+CSC
Sbjct: 567 ALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSC 626
Query: 644 GDFW 647
GD+W
Sbjct: 627 GDYW 630
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 181/354 (51%), Gaps = 43/354 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +SW +IS ++ A+++ LML+D + + T+S++L R C +
Sbjct: 122 MPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNV-RPNVYTYSSVL-----RSCNGM 175
Query: 61 G--RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
R +H I+K G S VFV S L+D++AKLG DA FDE+ + +++N+
Sbjct: 176 SDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNS----- 230
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
+I G QN A++LF+ M+ G +Q T
Sbjct: 231 --------------------------IIGGFAQNSRSDVALELFKRMKRAGFIAEQATLT 264
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
SVL AC GL LE G Q H I++ D ++ + +ALVDMYCKC S++ A VF M +
Sbjct: 265 SVLRACTGLALLELGMQAHVHIVKYDQ--DLILNNALVDMYCKCGSLEDALRVFNQMKER 322
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEG-TQF 297
+V++W+ M+ G QNG S+EA+K+F M+ +G +P+ T+ V+ +C++ LE+G F
Sbjct: 323 DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYF 382
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
+ G+ ++ GK G ++D+ +L NEM D V+W L+
Sbjct: 383 RSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 156/302 (51%), Gaps = 8/302 (2%)
Query: 151 QNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVF 210
Q L R A+ ++ GL D T+ ++ C A+ EG I + N H+ +F
Sbjct: 39 QRDLPR-AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMF 97
Query: 211 VGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNG 270
+ + L++MY K + A +F M +NV+SWT M+ Y + ++A+++ M R+
Sbjct: 98 LVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN 157
Query: 271 IEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSH 330
+ P+ +T SV+ SC ++ + H + GL S + V +AL+ + K G ED+
Sbjct: 158 VRPNVYTYSSVLRSCNGMSDVR---MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDAL 214
Query: 331 RLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAG 390
+F+EM D + W +++ G+A+ +++ ++LF++M G ++ TL VL AC+
Sbjct: 215 SVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLA 274
Query: 391 LVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATL 450
L+E G +VK Y I ++ ++D+ + G LE+A N+M D I W+T+
Sbjct: 275 LLELGMQAHVHIVK-YDQDLILNN--ALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTM 330
Query: 451 LS 452
+S
Sbjct: 331 IS 332
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 449 bits (1155), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/647 (36%), Positives = 359/647 (55%), Gaps = 34/647 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D + WN +ISG+ + ++++V+ ++ + L T +L + + + L
Sbjct: 180 MPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRL 239
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G QIH K G S+ +V + + +Y+K G I K G
Sbjct: 240 GMQIHSLATKTGCYSHDYVLTGFISLYSKCGKI---KMG--------------------- 275
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
LFR + D +++ MI G NG ++ LF+E+ L G + T S+
Sbjct: 276 -------SALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSL 328
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+ G L+ + IH + ++++ + V +AL +Y K I+ A +F K++
Sbjct: 329 VPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSL 385
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
SW AM+ GY QNG +E+A+ +F MQ++ P+ T+ ++S+CA L +L G H
Sbjct: 386 PSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDL 445
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
T S I VS AL+ Y KCG+I ++ RLF+ M ++EV+W ++SGY G+ E
Sbjct: 446 VRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEA 505
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+++F +ML+ G+ P VT + VL ACS AGLV++G F M+ YG P HY CM+D
Sbjct: 506 LNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVD 565
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
IL RAG L+ A FI M P + W TLL +CRIH + + + +E L ELDP N
Sbjct: 566 ILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGY 625
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
+VLLS+I+++ + + +R+T +++ + K PG + I+ H+F++ D S P +I
Sbjct: 626 HVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEI 685
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRV 600
Y +LEKL KM + GY P+ LHDVE E+ M+ HSE+LAIAFGL+ PG IR+
Sbjct: 686 YEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRI 745
Query: 601 VKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+KNLRVC DCH TK ISKIT+R I+VRDA RFH FK+G CSCGD+W
Sbjct: 746 IKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 128/483 (26%), Positives = 223/483 (46%), Gaps = 40/483 (8%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
+N+L+ G + + S + ++ V+ + K + T++ + +S R GR IHG
Sbjct: 86 FNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQA 145
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+ G S + +GS +V MY K + DA++ FD +PEK+ +++NTMI+G + + ES
Sbjct: 146 VVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESI 205
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
++FR DL E +D T +L A L
Sbjct: 206 QVFR---------------------------DLINE---SCTRLDTTTLLDILPAVAELQ 235
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
L G QIH+ + + +V + + +Y KC IK ++FR ++V++ AM+
Sbjct: 236 ELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIH 295
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
GY NG +E ++ +F + +G TL S++ +L + HG L + +S
Sbjct: 296 GYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLS 352
Query: 309 FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKML 368
+VS AL T Y K IE + +LF+E + SW A++SGY + G + I LF +M
Sbjct: 353 HASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQ 412
Query: 369 SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRL 428
P+ VT+ +LSAC++ G + G+ + +V+ T +I + ++ G +
Sbjct: 413 KSEFSPNPVTITCILSACAQLGALSLGK-WVHDLVRSTDFESSIYVSTALIGMYAKCGSI 471
Query: 429 EEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLEL--DPYNPASYVLLSS 486
EA+ + M + + W T++S +HG G+ A E+ P L
Sbjct: 472 AEARRLFDLMT-KKNEVTWNTMISGYGLHGQ---GQEALNIFYEMLNSGITPTPVTFLCV 527
Query: 487 IYA 489
+YA
Sbjct: 528 LYA 530
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 128/273 (46%), Gaps = 10/273 (3%)
Query: 195 QIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNG 254
Q HA II + ++++ + + L +I YA +F ++ +V + ++ G+ N
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 255 CSEEAVKIFCNMQRN-GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVS 313
++ +F +++++ ++P+ T IS+ + G HG+++V G S + +
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 314 NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG-L 372
+ +V Y K +ED+ ++F+ M +D + W ++SGY K E+I +F +++
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 373 KPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKE--YGIRPIHDH-YTCMIDILSRAGRLE 429
+ D TL+ +L A + + G + K Y HD+ T I + S+ G+++
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYS----HDYVLTGFISLYSKCGKIK 273
Query: 430 EAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
+ + PD + + ++ +G E+
Sbjct: 274 MGSALFREFR-KPDIVAYNAMIHGYTSNGETEL 305
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 449 bits (1155), Expect = e-125, Method: Compositional matrix adjust.
Identities = 245/640 (38%), Positives = 375/640 (58%), Gaps = 50/640 (7%)
Query: 10 NLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHIL 69
N +I+ G ++ A++V++ G+ + IT++++LI S D R + H L
Sbjct: 65 NKIIARCVRSGDIDGALRVFH-----GMRAKNTITWNSLLIGISK----DPSRMMEAHQL 115
Query: 70 KFGFGSY-VFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
F + ++ Y + A+ FD +P K+ +NTMITG RRG +E++R
Sbjct: 116 FDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKAR 175
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
LF M +K+ +SW MI+G ++ G +A F+ + G
Sbjct: 176 ELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRG------------------- 216
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW-KNVVSWTAML 247
V +A++ Y K K ++ AE++F+ M KN+V+W AM+
Sbjct: 217 --------------------VVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMI 256
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
GY +N E+ +K+F M GI P+ L S + C+ L++L+ G Q H + L
Sbjct: 257 SGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLC 316
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKM 367
+ +T +L++ Y KCG + D+ +LF M +D V+W A++SGYA+ G A++ + LF +M
Sbjct: 317 NDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREM 376
Query: 368 LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGR 427
+ + ++PD +T + VL AC+ AGLV G YFE MV++Y + P DHYTCM+D+L RAG+
Sbjct: 377 IDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGK 436
Query: 428 LEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSI 487
LEEA I MPF P A + TLL +CR+H NVE+ ++AAE LL+L+ N A YV L++I
Sbjct: 437 LEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANI 496
Query: 488 YASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKL 547
YASK +W+ V+++R+ M+E V K PG SWI+ +++VH F + D P D I+ +L++L
Sbjct: 497 YASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKEL 556
Query: 548 NRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVC 607
+KM GY P++ LH+VE +K K+L HSEKLA+AFG + +P G I+V KNLR+C
Sbjct: 557 EKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRIC 616
Query: 608 SDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
DCH A K+IS+I +REI+VRD RFH FK+G CSCGD+W
Sbjct: 617 GDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 173/373 (46%), Gaps = 45/373 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MPF D SWN +I+G+A G + A +++ M++ + ++++ M+ S C DL
Sbjct: 150 MPFKDAASWNTMITGYARRGEMEKARELFYSMMEK-----NEVSWNAMI--SGYIECGDL 202
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+ H F P + +V + MITG ++
Sbjct: 203 EKASH---------------------------------FFKVAPVRGVVAWTAMITGYMK 229
Query: 121 RGLVEESRRLFRGMK-DKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
VE + +F+ M +K+ ++W MI+G ++N + + LFR M EG+ + S
Sbjct: 230 AKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSS 289
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKN 239
L C L AL+ G+QIH + ++ ++V ++L+ MYCKC + A +F M K+
Sbjct: 290 ALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKD 349
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
VV+W AM+ GY Q+G +++A+ +F M N I PD T +V+ +C N A L +
Sbjct: 350 VVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLAC-NHAGLVNIGMAYF 408
Query: 300 RSLVTGLISFITVSN--ALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
S+V + +V G+ G +E++ +L M R + + G + K
Sbjct: 409 ESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKN 468
Query: 358 NETIDL-FEKMLS 369
E + EK+L
Sbjct: 469 VELAEFAAEKLLQ 481
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 128/323 (39%), Gaps = 66/323 (20%)
Query: 199 FIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCS-E 257
++ + +D +F + ++ + I A VF M KN ++W ++L+G ++
Sbjct: 51 YLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMM 110
Query: 258 EAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR----------SLVTG-- 305
EA ++F + EPD F+ ++S + E+ F R +++TG
Sbjct: 111 EAHQLFDEIP----EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYA 166
Query: 306 --------------LISFITVS-NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSG 350
++ VS NA+++ Y +CG++E + F VR V+WTA+++G
Sbjct: 167 RRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITG 226
Query: 351 YAKFGKA--------------------------------NETIDLFEKMLSHGLKPDEVT 378
Y K K + + LF ML G++P+
Sbjct: 227 YMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSG 286
Query: 379 LIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
L L CS ++ GR +I+ K + T +I + + G L +A M
Sbjct: 287 LSSALLGCSELSALQLGRQIHQIVSKSTLCNDV-TALTSLISMYCKCGELGDAWKLFEVM 345
Query: 439 PFPPDAIGWATLLSSCRIHGNVE 461
D + W ++S HGN +
Sbjct: 346 K-KKDVVAWNAMISGYAQHGNAD 367
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 447 bits (1150), Expect = e-124, Method: Compositional matrix adjust.
Identities = 243/680 (35%), Positives = 369/680 (54%), Gaps = 64/680 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + +WN LI +AS ++ + M+ + ++ TF ++ ++ + L
Sbjct: 90 IPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSL 149
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +HG +K GS VFV + L+ Y G +
Sbjct: 150 GQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDL--------------------------- 182
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+ + ++F +K+KD +SW +MI G +Q G +A++LF++M E + T V
Sbjct: 183 ----DSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGV 238
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L+AC + LE G+Q+ ++I N N+ + +A++DMY KC SI+ A+ +F M K+
Sbjct: 239 LSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDN 298
Query: 241 VSWTAMLVGYG-------------------------------QNGCSEEAVKIFCNMQ-R 268
V+WT ML GY QNG EA+ +F +Q +
Sbjct: 299 VTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQ 358
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIED 328
++ + TL S +S+CA + +LE G H G+ V++AL+ Y KCG++E
Sbjct: 359 KNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEK 418
Query: 329 SHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
S +FN + RD W+A++ G A G NE +D+F KM +KP+ VT V ACS
Sbjct: 419 SREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSH 478
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
GLV++ F M YGI P HY C++D+L R+G LE+A FI MP PP W
Sbjct: 479 TGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWG 538
Query: 449 TLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
LL +C+IH N+ + + A LLEL+P N ++VLLS+IYA GKW++VS+LR+ MR G
Sbjct: 539 ALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTG 598
Query: 509 VRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVE 568
++K+PGCS I+ +H F + D + P S+++Y +L ++ K+ GY P++S VL +E
Sbjct: 599 LKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIE 658
Query: 569 LSE-KIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILV 627
E K + LN HSEKLAI +GL+ IRV+KNLRVC DCH+ K IS++ REI+V
Sbjct: 659 EEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIV 718
Query: 628 RDAVRFHLFKNGECSCGDFW 647
RD RFH F+NG+CSC DFW
Sbjct: 719 RDRYRFHHFRNGQCSCNDFW 738
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 210/440 (47%), Gaps = 68/440 (15%)
Query: 55 RRCVDLG--RQIHGHILKFGFGSYVFVGSPLVDMYA--KLGLIYDAKRGFDELPEKNIVM 110
RCV L +Q HGH+++ G S + S L M A + A++ FDE+P+ N
Sbjct: 38 ERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFA 97
Query: 111 YNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGL 170
+NT+I R + D W + D+ E +
Sbjct: 98 WNTLI-------------RAYASGPDPVLSIWAFL--------------DMVSESQCYP- 129
Query: 171 AMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAES 230
+++TF ++ A + +L G+ +H +++ +VFV ++L+ Y C + A
Sbjct: 130 --NKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACK 187
Query: 231 VFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLAS 290
VF T+ K+VVSW +M+ G+ Q G ++A+++F M+ ++ T+ V+S+CA + +
Sbjct: 188 VFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRN 247
Query: 291 LEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWT----- 345
LE G Q + +T++NA++ Y KCG+IED+ RLF+ M +D V+WT
Sbjct: 248 LEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDG 307
Query: 346 --------------------------ALVSGYAKFGKANETIDLFEKM-LSHGLKPDEVT 378
AL+S Y + GK NE + +F ++ L +K +++T
Sbjct: 308 YAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQIT 367
Query: 379 LIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKM 438
L+ LSAC++ G +E GR + +K++GIR + +I + S+ G LE+++ N +
Sbjct: 368 LVSTLSACAQVGALELGR-WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV 426
Query: 439 PFPPDAIGWATLLSSCRIHG 458
D W+ ++ +HG
Sbjct: 427 E-KRDVFVWSAMIGGLAMHG 445
Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 161/327 (49%), Gaps = 14/327 (4%)
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYC--KCKSIKYAESVFRTMAWKNVVSWTA 245
++L + KQ H +IR + + S L M S++YA VF + N +W
Sbjct: 41 VSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNT 100
Query: 246 MLVGYGQNGCSEEAVKIFCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++ Y ++ F +M + P+ +T +I + A ++SL G HG ++ +
Sbjct: 101 LIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKS 160
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
+ S + V+N+L+ Y CG+++ + ++F + +D VSW ++++G+ + G ++ ++LF
Sbjct: 161 AVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELF 220
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+KM S +K VT++GVLSAC++ +E GR ++E + M+D+ ++
Sbjct: 221 KKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCS-YIEENRVNVNLTLANAMLDMYTK 279
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
G +E+AK + M D + W T+L I + E + S+ + D ++ L
Sbjct: 280 CGSIEDAKRLFDAME-EKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKD---IVAWNAL 335
Query: 485 SSIYASKGKWD------HVSQLRRTMR 505
S Y GK + H QL++ M+
Sbjct: 336 ISAYEQNGKPNEALIVFHELQLQKNMK 362
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 447 bits (1149), Expect = e-124, Method: Compositional matrix adjust.
Identities = 258/655 (39%), Positives = 379/655 (57%), Gaps = 42/655 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VSWN +I+G +G +AV+ Y M + + S T + L +S + L
Sbjct: 375 MTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGS-FTLISSLSSCASLKWAKL 433
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+QIHG LK G V V + L+ +YA+ G +
Sbjct: 434 GQQIHGESLKLGIDLNVSVSNALMTLYAETGYL--------------------------- 466
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLER---EAIDLFREMRLEGLAMDQFTF 177
E R++F M + D +SW ++I L ++ ER EA+ F + G +++ TF
Sbjct: 467 ----NECRKIFSSMPEHDQVSWNSIIGALARS--ERSLPEAVVCFLNAQRAGQKLNRITF 520
Query: 178 GSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMA- 236
SVL+A L E GKQIH ++N+ D +AL+ Y KC + E +F MA
Sbjct: 521 SSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAE 580
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
++ V+W +M+ GY N +A+ + M + G D F +V+S+ A++A+LE G +
Sbjct: 581 RRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGME 640
Query: 297 FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGK 356
H S+ L S + V +ALV Y KCG ++ + R FN M VR+ SW +++SGYA+ G+
Sbjct: 641 VHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQ 700
Query: 357 ANETIDLFEKM-LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
E + LFE M L PD VT +GVLSACS AGL+E+G +FE M YG+ P +H+
Sbjct: 701 GEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHF 760
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSC-RIHG-NVEIGKWAAESLLEL 473
+CM D+L RAG L++ + FI KMP P+ + W T+L +C R +G E+GK AAE L +L
Sbjct: 761 SCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQL 820
Query: 474 DPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWS 533
+P N +YVLL ++YA+ G+W+ + + R+ M++ V+K+ G SW+ K VH+F A D S
Sbjct: 821 EPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKS 880
Query: 534 SPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFI- 592
P +D IY +L++LNRKM GYVP L+D+E K ++L++HSEKLA+AF L
Sbjct: 881 HPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQR 940
Query: 593 PPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LPIR++KNLRVC DCH+A KYISKI R+I++RD+ RFH F++G CSC DFW
Sbjct: 941 SSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 136/458 (29%), Positives = 225/458 (49%), Gaps = 45/458 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVD--LGR 62
+ VSWN +IS ++ G A ++++ M DG + TF +++ + S D L
Sbjct: 170 NSVSWNSIISVYSQAGDQRSAFRIFSSMQYDG-SRPTEYTFGSLVTTACSLTEPDVRLLE 228
Query: 63 QIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRG 122
QI I K G + +FVGS LV +AK G + A++ F+++ +N V N ++ GL+R+
Sbjct: 229 QIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQK 288
Query: 123 LVEESRRLFRGMK---DKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
EE+ +LF M D S+ +++ + L E
Sbjct: 289 WGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEE---------------------- 326
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKD-NVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
+ L++G+++H +I D V +G+ LV+MY KC SI A VF M K
Sbjct: 327 --------VGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDK 378
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+ VSW +M+ G QNGC EAV+ + +M+R+ I P FTL S +SSCA+L + G Q H
Sbjct: 379 DSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIH 438
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA- 357
G SL G+ ++VSNAL+T Y + G + + ++F+ M D+VSW +++ A+ ++
Sbjct: 439 GESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSL 498
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYT- 416
E + F G K + +T VLSA S E G+ + +K I D T
Sbjct: 499 PEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKN----NIADEATT 554
Query: 417 --CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
+I + G ++ + ++M D + W +++S
Sbjct: 555 ENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMIS 592
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 126/470 (26%), Positives = 222/470 (47%), Gaps = 58/470 (12%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW ++SG++ +G +A+ M+K+G+ + ++ F ++L R C ++
Sbjct: 62 MPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFS-NQYAFVSVL-----RACQEI 115
Query: 61 -------GRQIHGHILKFGFGSYVFVGSPLVDMYAK-LGLIYDAKRGFDELPEKNIVMYN 112
GRQIHG + K + V + L+ MY K +G + A F ++ KN V +N
Sbjct: 116 GSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWN 175
Query: 113 TMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM 172
++I+ Q G +R A +F M+ +G
Sbjct: 176 -------------------------------SIISVYSQAGDQRSAFRIFSSMQYDGSRP 204
Query: 173 DQFTFGSVLTACGGLLA--LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAES 230
++TFGS++T L + +QI I ++ ++FVGS LV + K S+ YA
Sbjct: 205 TEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARK 264
Query: 231 VFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRN-GIEPDDFTLGSVIS-----S 284
VF M +N V+ ++VG + EEA K+F +M + P+ + + ++S S
Sbjct: 265 VFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI--LLSSFPEYS 322
Query: 285 CANLASLEEGTQFHGRSLVTGLISF-ITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS 343
A L++G + HG + TGL+ F + + N LV Y KCG+I D+ R+F M +D VS
Sbjct: 323 LAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVS 382
Query: 344 WTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMV 403
W ++++G + G E ++ ++ M H + P TLI LS+C+ + G+ +
Sbjct: 383 WNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESL 442
Query: 404 KEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
K GI ++ + + G L E + + MP D + W +++ +
Sbjct: 443 K-LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 203/417 (48%), Gaps = 36/417 (8%)
Query: 105 EKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFRE 164
+K++ + N +I L G +R++F M ++ +SW +++G +NG +EA+ R+
Sbjct: 33 DKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRD 92
Query: 165 MRLEGLAMDQFTFGSVLTACG--GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC 222
M EG+ +Q+ F SVL AC G + + G+QIH + + + + V + L+ MY KC
Sbjct: 93 MVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKC 152
Query: 223 -KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSV 281
S+ YA F + KN VSW +++ Y Q G A +IF +MQ +G P ++T GS+
Sbjct: 153 IGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSL 212
Query: 282 ISSCANLASLEEGTQFHGRSLVT----GLISFITVSNALVTFYGKCGNIEDSHRLFNEMN 337
+++ +L E + + + T GL++ + V + LV+ + K G++ + ++FN+M
Sbjct: 213 VTTACSLT--EPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQME 270
Query: 338 VRDEVSWTALVSGYAKFGKANETIDLFEKMLSH-GLKPDEVTLIGVLSACSRAGLVEKGR 396
R+ V+ L+ G + E LF M S + P+ ++ LS+ L E
Sbjct: 271 TRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVIL--LSSFPEYSLAE--- 325
Query: 397 HYFEIMVKEYGIRPIHDHYTC-------------MIDILSRAGRLEEAKSFINKMPFPPD 443
E+ +K+ R +H H ++++ ++ G + +A+ M D
Sbjct: 326 ---EVGLKKG--REVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT-DKD 379
Query: 444 AIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKG-KWDHVSQ 499
++ W ++++ +G +S+ D P S+ L+SS+ + KW + Q
Sbjct: 380 SVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL-PGSFTLISSLSSCASLKWAKLGQ 435
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 120/250 (48%), Gaps = 10/250 (4%)
Query: 196 IHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGC 255
H+ + +N +V++ + L++ Y + A VF M +N VSW ++ GY +NG
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 256 SEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE--EGTQFHGRSLVTGLISFITVS 313
+EA+ +M + GI + + SV+ +C + S+ G Q HG VS
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 314 NALVTFYGKC-GNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGL 372
N L++ Y KC G++ + F ++ V++ VSW +++S Y++ G +F M G
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 373 KPDEVTLIG-VLSACSRAGLVEKGRHYFE-IM--VKEYGIRPIHDHYTCMIDILSRAGRL 428
+P E T V +ACS L E E IM +++ G+ + ++ +++G L
Sbjct: 203 RPTEYTFGSLVTTACS---LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259
Query: 429 EEAKSFINKM 438
A+ N+M
Sbjct: 260 SYARKVFNQM 269
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 446 bits (1146), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/592 (38%), Positives = 346/592 (58%), Gaps = 70/592 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D +WN ++SG A H +A+ + +M K+G L+ +F+++L S ++
Sbjct: 112 MPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFV-LNEYSFASVLSACSGLNDMNK 170
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+H I K F S V++GS LVDMY+K G + DA+R FDE
Sbjct: 171 GVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDE------------------ 212
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
M D++ +SW ++IT QNG EA+D+F+ M + D+ T SV
Sbjct: 213 -------------MGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASV 259
Query: 181 LTACGGLLALEEGKQIHAFIIRNDH-KDNVFVGSALVDMYCKCKSIKYAESVFRTM---- 235
++AC L A++ G+++H +++ND ++++ + +A VDMY KC IK A +F +M
Sbjct: 260 ISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRN 319
Query: 236 ---------------------------AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQR 268
A +NVVSW A++ GY QNG +EEA+ +FC ++R
Sbjct: 320 VIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKR 379
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFH------GRSLVTGLISFITVSNALVTFYGK 322
+ P ++ +++ +CA+LA L G Q H G +G I V N+L+ Y K
Sbjct: 380 ESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVK 439
Query: 323 CGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGV 382
CG +E+ + +F +M RD VSW A++ G+A+ G NE ++LF +ML G KPD +T+IGV
Sbjct: 440 CGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGV 499
Query: 383 LSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPP 442
LSAC AG VE+GRHYF M +++G+ P+ DHYTCM+D+L RAG LEEAKS I +MP P
Sbjct: 500 LSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQP 559
Query: 443 DAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRR 502
D++ W +LL++C++H N+ +GK+ AE LLE++P N YVLLS++YA GKW+ V +R+
Sbjct: 560 DSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRK 619
Query: 503 TMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKE 554
+MR++GV K PGCSWIK + H+F D S P QI++ L+ L +M E
Sbjct: 620 SMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPE 671
Score = 250 bits (638), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 134/430 (31%), Positives = 234/430 (54%), Gaps = 44/430 (10%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
R +H ++K GF + +F+ + L+D Y+K G + D ++ FD++P++NI +N+++TGL +
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G ++E+ LFR M ++D +W +M++G Q+ EA+ F M EG +++++F SVL
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
+AC GL + +G Q+H+ I ++ +V++GSALVDMY KC ++ A+ VF M +NVV
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
SW +++ + QNG + EA+ +F M + +EPD+ TL SVIS+CA+L++++ G + HGR
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 302 LVTG-LISFITVSNALVTFYGKCGNIEDSHRLFNEMNV---------------------- 338
+ L + I +SNA V Y KC I+++ +F+ M +
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAA 339
Query: 339 ---------RDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRA 389
R+ VSW AL++GY + G+ E + LF + + P + +L AC+
Sbjct: 340 RLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADL 399
Query: 390 GLVEKG--------RHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFP 441
+ G +H F+ E + + +ID+ + G +EE KM
Sbjct: 400 AELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNS---LIDMYVKCGCVEEGYLVFRKM-ME 455
Query: 442 PDAIGWATLL 451
D + W ++
Sbjct: 456 RDCVSWNAMI 465
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 445 bits (1145), Expect = e-124, Method: Compositional matrix adjust.
Identities = 243/657 (36%), Positives = 374/657 (56%), Gaps = 44/657 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VSW+ L+SGH +G + ++ +++ M + G+ + TFST L ++
Sbjct: 67 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGI-YPNEFTFSTNLKACGLLNALEK 125
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G QIHG LK GF V VG+ LVDMY+K G I
Sbjct: 126 GLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI--------------------------- 158
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAM--DQFTFG 178
E+ ++FR + D+ ISW MI G + G +A+D F M+ + D+FT
Sbjct: 159 ----NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLT 214
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDH--KDNVFVGSALVDMYCKCKSIKYAESVFRTMA 236
S+L AC + GKQIH F++R+ + + +LVD+Y KC + A F +
Sbjct: 215 SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK 274
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 296
K ++SW+++++GY Q G EA+ +F +Q + D F L S+I A+ A L +G Q
Sbjct: 275 EKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQ 334
Query: 297 FHGRS--LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKF 354
+ L +GL + +V N++V Y KCG ++++ + F EM ++D +SWT +++GY K
Sbjct: 335 MQALAVKLPSGLET--SVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKH 392
Query: 355 GKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDH 414
G +++ +F +ML H ++PDEV + VLSACS +G++++G F +++ +GI+P +H
Sbjct: 393 GLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEH 452
Query: 415 YTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELD 474
Y C++D+L RAGRL+EAK I+ MP P+ W TLLS CR+HG++E+GK + LL +D
Sbjct: 453 YACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRID 512
Query: 475 PYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS 534
NPA+YV++S++Y G W+ R KG++K+ G SW++ + VH F + + S
Sbjct: 513 AKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSH 572
Query: 535 PYSDQIYAELEKLNRKMIKE-GYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLL--- 590
P + I L++ R++ +E GYV + LHD++ K + L HSEKLAI L
Sbjct: 573 PLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGG 632
Query: 591 FIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
G IRV KNLRVC DCH K +SKIT+ +VRDAVRFH F++G CSCGD+W
Sbjct: 633 LNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/442 (28%), Positives = 224/442 (50%), Gaps = 42/442 (9%)
Query: 41 SRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF 100
R ++L + + + D G Q+H ++LK G G + + L+DMY K A + F
Sbjct: 5 QRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVF 64
Query: 101 DELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAID 160
D +PE+N+V SW+ +++G + NG + ++
Sbjct: 65 DSMPERNVV-------------------------------SWSALMSGHVLNGDLKGSLS 93
Query: 161 LFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYC 220
LF EM +G+ ++FTF + L ACG L ALE+G QIH F ++ + V VG++LVDMY
Sbjct: 94 LFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYS 153
Query: 221 KCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIE--PDDFTL 278
KC I AE VFR + ++++SW AM+ G+ G +A+ F MQ I+ PD+FTL
Sbjct: 154 KCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTL 213
Query: 279 GSVISSCANLASLEEGTQFHGRSLVTGL--ISFITVSNALVTFYGKCGNIEDSHRLFNEM 336
S++ +C++ + G Q HG + +G S T++ +LV Y KCG + + + F+++
Sbjct: 214 TSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQI 273
Query: 337 NVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR 396
+ +SW++L+ GYA+ G+ E + LF+++ + D L ++ + L+ +G+
Sbjct: 274 KEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGK 333
Query: 397 HYFEIMVK-EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCR 455
+ VK G+ ++D+ + G ++EA+ +M D I W +++
Sbjct: 334 QMQALAVKLPSGLET--SVLNSVVDMYLKCGLVDEAEKCFAEMQL-KDVISWTVVITGYG 390
Query: 456 IHGNVEIGKWAAESLLELDPYN 477
HG +GK + E+ +N
Sbjct: 391 KHG---LGKKSVRIFYEMLRHN 409
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 444 bits (1141), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/649 (36%), Positives = 386/649 (59%), Gaps = 19/649 (2%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + +SWN L+SG+ +G +++A KV++LM + + ++++ ++ VD+
Sbjct: 74 MPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNV-----VSWTALVKGYVHNGKVDV 128
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+ + + S+ ++ + + G I DA + ++ +P+K+ + +MI GL +
Sbjct: 129 AESLFWKMPEKNKVSWTV----MLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCK 184
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G V+E+R +F M ++ I+WTTM+TG QN +A +F M + + ++ S+
Sbjct: 185 EGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSM 240
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L +E+ +++ + V +A++ + I A VF +M +N
Sbjct: 241 LMGYVQNGRIEDAEELFEVMPVKP----VIACNAMISGLGQKGEIAKARRVFDSMKERND 296
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
SW ++ + +NG EA+ +F MQ+ G+ P TL S++S CA+LASL G Q H +
Sbjct: 297 ASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQ 356
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ + V++ L+T Y KCG + S +F+ +D + W +++SGYA G E
Sbjct: 357 LVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEA 416
Query: 361 IDLFEKM-LSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ +F +M LS KP+EVT + LSACS AG+VE+G +E M +G++PI HY CM+
Sbjct: 417 LKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMV 476
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPA 479
D+L RAGR EA I+ M PDA W +LL +CR H +++ ++ A+ L+E++P N
Sbjct: 477 DMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSG 536
Query: 480 SYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS-PYSD 538
+Y+LLS++YAS+G+W V++LR+ M+ + VRK PGCSW + +++VH F+ +S P +
Sbjct: 537 TYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQE 596
Query: 539 QIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 598
I L++L+ + + GY PD S LHDV+ EK+ L +HSE+LA+A+ LL + G+PI
Sbjct: 597 SILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPI 656
Query: 599 RVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RV+KNLRVCSDCH A K ISK+ +REI++RDA RFH F+NGECSC D+W
Sbjct: 657 RVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 142 bits (359), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 191/367 (52%), Gaps = 24/367 (6%)
Query: 95 DAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGL 154
DA++ FDE+P++NI+ +N +++G ++ G ++E+R++F M +++ +SWT ++ G + NG
Sbjct: 66 DARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGK 125
Query: 155 EREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSA 214
A LF +M + ++ ++ +L +++ +++ I KDN+ ++
Sbjct: 126 VDVAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDACKLYEMI---PDKDNI-ARTS 177
Query: 215 LVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD 274
++ CK + A +F M+ ++V++WT M+ GYGQN ++A KIF M E
Sbjct: 178 MIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP----EKT 233
Query: 275 DFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFN 334
+ + S++ +E+ + V +I+ NA+++ G+ G I + R+F+
Sbjct: 234 EVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIA----CNAMISGLGQKGEIAKARRVFD 289
Query: 335 EMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEK 394
M R++ SW ++ + + G E +DLF M G++P TLI +LS C+ +
Sbjct: 290 SMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHH 349
Query: 395 GRHYFEIMVK-EYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
G+ +V+ ++ + D Y + ++ + + G L ++K ++ P D I W +++
Sbjct: 350 GKQVHAQLVRCQFDV----DVYVASVLMTMYIKCGELVKSKLIFDRFP-SKDIIMWNSII 404
Query: 452 SSCRIHG 458
S HG
Sbjct: 405 SGYASHG 411
Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 168/363 (46%), Gaps = 28/363 (7%)
Query: 112 NTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLA 171
N IT L R G + E+R+LF K SW +M+ G N + R+A LF EM +
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI- 79
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
++ +++ ++E +++ + + NV +ALV Y + AES+
Sbjct: 80 ---ISWNGLVSGYMKNGEIDEARKVFDLM----PERNVVSWTALVKGYVHNGKVDVAESL 132
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASL 291
F M KN VSWT ML+G+ Q+G ++A K++ + + D+ S+I +
Sbjct: 133 FWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIP----DKDNIARTSMIHGLCKEGRV 188
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
+E + +I++ T +VT YG+ ++D+ ++F+ M + EVSWT+++ GY
Sbjct: 189 DEAREIFDEMSERSVITWTT----MVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGY 244
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPI 411
+ G+ + +LFE M +KP + ++S + G + K R F+ M KE
Sbjct: 245 VQNGRIEDAEELFEVM---PVKP-VIACNAMISGLGQKGEIAKARRVFDSM-KERN---- 295
Query: 412 HDHYTCMIDILSRAG-RLEEAKSFI--NKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
+ +I I R G LE FI K P ++LS C ++ GK
Sbjct: 296 DASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHA 355
Query: 469 SLL 471
L+
Sbjct: 356 QLV 358
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 67/140 (47%), Gaps = 10/140 (7%)
Query: 312 VSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHG 371
+N +T + G I ++ +LF+ + + SW ++V+GY + LF++M
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRN 78
Query: 372 LKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEA 431
+ ++ G++S + G +++ R F++M + + +T ++ G+++ A
Sbjct: 79 I----ISWNGLVSGYMKNGEIDEARKVFDLMPERNVV-----SWTALVKGYVHNGKVDVA 129
Query: 432 KSFINKMPFPPDAIGWATLL 451
+S KMP + + W +L
Sbjct: 130 ESLFWKMP-EKNKVSWTVML 148
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 440 bits (1132), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/644 (36%), Positives = 381/644 (59%), Gaps = 34/644 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V+WN LI G+ + +A++ ++ M+ G + ++ ++++ S + G ++
Sbjct: 350 DVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKS-DEVSMTSIIAASGRLSNLLAGMEL 408
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +++K G+ S + VG+ L+DMY+K L T G
Sbjct: 409 HAYVIKHGWDSNLQVGNTLIDMYSKCNL--------------------TCYMG------- 441
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
R F M DKD ISWTT+I G QN EA++LFR++ + + +D+ GS+L A
Sbjct: 442 ----RAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRAS 497
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L ++ K+IH I+R D V + + LVD+Y KC+++ YA VF ++ K+VVSWT
Sbjct: 498 SVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWT 556
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
+M+ NG EAV++F M G+ D L ++S+ A+L++L +G + H L
Sbjct: 557 SMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRK 616
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
G +++ A+V Y CG+++ + +F+ + + + +T++++ Y G ++LF
Sbjct: 617 GFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELF 676
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+KM + PD ++ + +L ACS AGL+++GR + +IM EY + P +HY C++D+L R
Sbjct: 677 DKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGR 736
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
A + EA F+ M P A W LL++CR H EIG+ AA+ LLEL+P NP + VL+
Sbjct: 737 ANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLV 796
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S+++A +G+W+ V ++R M+ G+ K PGCSWI+ +VH F+A D S P S +IY +L
Sbjct: 797 SNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKL 856
Query: 545 EKLNRKMIKE-GYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 603
++ RK+ +E GYV D VLH+V+ EK++ML+ HSE++AIA+GLL P +R+ KN
Sbjct: 857 SEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKN 916
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LRVC DCH K +SK+ +R+I++RDA RFH F++G CSCGD W
Sbjct: 917 LRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 143/517 (27%), Positives = 247/517 (47%), Gaps = 71/517 (13%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V WN ++S +++ G + ++++ M G S T + L LG++I
Sbjct: 248 DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNS-YTIVSALTACDGFSYAKLGKEI 306
Query: 65 HGHILKFG-FGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGL 123
H +LK S ++V + L+ MY + G ++P+
Sbjct: 307 HASVLKSSTHSSELYVCNALIAMYTRCG----------KMPQ------------------ 338
Query: 124 VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTA 183
+ R+ R M + D ++W ++I G +QN + +EA++ F +M G D+ + S++ A
Sbjct: 339 ---AERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Query: 184 CGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSW 243
G L L G ++HA++I++ N+ VG+ L+DMY KC Y F M K+++SW
Sbjct: 396 SGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISW 455
Query: 244 TAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLV 303
T ++ GY QN C EA+++F ++ + +E D+ LGS++ + + L S+ + H L
Sbjct: 456 TTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILR 515
Query: 304 TGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDL 363
GL+ + + N LV YGKC N+ + R+F + +D VSWT+++S A G +E ++L
Sbjct: 516 KGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVEL 574
Query: 364 FEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRH-YFEIMVKEYGIR-----PIHDHYTC 417
F +M+ GL D V L+ +LSA + + KGR + ++ K + + + D Y C
Sbjct: 575 FRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYAC 634
Query: 418 ---------MIDILSRAGRLE---------------EAKSFINKM---PFPPDAIGWATL 450
+ D + R G L+ A +KM PD I + L
Sbjct: 635 CGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLAL 694
Query: 451 LSSCRIHGNVEIGKW---AAESLLELDPYNPASYVLL 484
L +C G ++ G+ E EL+P+ P YV L
Sbjct: 695 LYACSHAGLLDEGRGFLKIMEHEYELEPW-PEHYVCL 730
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/482 (27%), Positives = 239/482 (49%), Gaps = 45/482 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP +WN +I + S+G A+ +Y M +G+ L +F +L + R +
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVP-LGLSSFPALLKACAKLRDIRS 200
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEK-NIVMYNTMITGLL 119
G ++H ++K G+ S F+ + LV MYAK + A+R FD EK + V++N++++
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILS--- 257
Query: 120 RRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGS 179
S++T +G E ++LFREM + G A + +T S
Sbjct: 258 ---------------------SYST-------SGKSLETLELFREMHMTGPAPNSYTIVS 289
Query: 180 VLTACGGLLALEEGKQIHAFIIRND-HKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
LTAC G + GK+IHA ++++ H ++V +AL+ MY +C + AE + R M
Sbjct: 290 ALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNA 349
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFH 298
+VV+W +++ GY QN +EA++ F +M G + D+ ++ S+I++ L++L G + H
Sbjct: 350 DVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELH 409
Query: 299 GRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN 358
+ G S + V N L+ Y KC R F M+ +D +SWT +++GYA+
Sbjct: 410 AYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHV 469
Query: 359 ETIDLFEKMLSHGLKPDEVTLIGVLSACS--RAGLVEKGRHYFEIMVKEYGIRPIHDHYT 416
E ++LF + ++ DE+ L +L A S ++ L+ K H I+ K I +
Sbjct: 470 EALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIH-CHILRKGLLDTVIQNE-- 526
Query: 417 CMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGN----VEIGKWAAESLLE 472
++D+ + + A + D + W +++SS ++GN VE+ + E+ L
Sbjct: 527 -LVDVYGKCRNMGYATRVFESIK-GKDVVSWTSMISSSALNGNESEAVELFRRMVETGLS 584
Query: 473 LD 474
D
Sbjct: 585 AD 586
Score = 175 bits (444), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 152/609 (24%), Positives = 271/609 (44%), Gaps = 62/609 (10%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYV--FVGSPLVDMYAKLGLIYDAKRGFD 101
F+ +L + RR V GRQ+H I K F S+ F+ LV MY K G + DA++ FD
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFK-TFPSFELDFLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 102 ELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDL 161
E+P D+ + +W TMI + NG A+ L
Sbjct: 141 EMP-------------------------------DRTAFAWNTMIGAYVSNGEPASALAL 169
Query: 162 FREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCK 221
+ MR+EG+ + +F ++L AC L + G ++H+ +++ + F+ +ALV MY K
Sbjct: 170 YWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAK 229
Query: 222 CKSIKYAESVFRTMAWK-NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGS 280
+ A +F K + V W ++L Y +G S E +++F M G P+ +T+ S
Sbjct: 230 NDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVS 289
Query: 281 VISSCANLASLEEGTQFHGRSLVTGL-ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
+++C + + G + H L + S + V NAL+ Y +CG + + R+ +MN
Sbjct: 290 ALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNA 349
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
D V+W +L+ GY + E ++ F M++ G K DEV++ +++A R + G
Sbjct: 350 DVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELH 409
Query: 400 EIMVKEYGIRPIHDHYTCMIDILSRAG-RLEEAKSFINKMPFPPDAIGWATLLS-----S 453
++K +G +ID+ S+ ++F+ D I W T+++
Sbjct: 410 AYVIK-HGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRM--HDKDLISWTTVIAGYAQND 466
Query: 454 CRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASK--GKWDHVSQLRRTMREKGVRK 511
C + +E+ + A+ +E+D S + SS+ S K H LR+ + + ++
Sbjct: 467 CHVEA-LELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQN 525
Query: 512 D-----PGCSWIKYKSRV--HIFSAD--DWSSPYSDQIY----AELEKLNRKMIKEGYVP 558
+ C + Y +RV I D W+S S +E +L R+M++ G
Sbjct: 526 ELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSA 585
Query: 559 DMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG-LPIRVVKNLRVCSDCHNATKYI 617
D ++L + + + LN E F G + + VV C D +A
Sbjct: 586 DSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVF 645
Query: 618 SKITQREIL 626
+I ++ +L
Sbjct: 646 DRIERKGLL 654
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 437 bits (1123), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/644 (35%), Positives = 367/644 (56%), Gaps = 33/644 (5%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V W ++S + +G D++K+ + M G + TF T L S D + +
Sbjct: 211 DIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMP-NNYTFDTALKASIGLGAFDFAKGV 269
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG ILK + VG L+ +Y +LG + DA + F+E+P+ ++V ++ MI +
Sbjct: 270 HGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQ---- 325
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
NG EA+DLF MR + ++FT S+L C
Sbjct: 326 ---------------------------NGFCNEAVDLFIRMREAFVVPNEFTLSSILNGC 358
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
G+Q+H +++ +++V +AL+D+Y KC+ + A +F ++ KN VSW
Sbjct: 359 AIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWN 418
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
++VGY G +A +F RN + + T S + +CA+LAS++ G Q HG ++ T
Sbjct: 419 TVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKT 478
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
+ VSN+L+ Y KCG+I+ + +FNEM D SW AL+SGY+ G + + +
Sbjct: 479 NNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRIL 538
Query: 365 EKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+ M KP+ +T +GVLS CS AGL+++G+ FE M++++GI P +HYTCM+ +L R
Sbjct: 539 DIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGR 598
Query: 425 AGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLL 484
+G+L++A I +P+ P + W +LS+ N E + +AE +L+++P + A+YVL+
Sbjct: 599 SGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLV 658
Query: 485 SSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAEL 544
S++YA +W +V+ +R++M+E GV+K+PG SWI+++ VH FS P I L
Sbjct: 659 SNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGML 718
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLP-IRVVKN 603
E LN K + GYVPD ++VL D++ EK K L HSE+LA+A+GL+ +P I ++KN
Sbjct: 719 EWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKN 778
Query: 604 LRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
LR+CSDCH+A K IS I QR++++RD RFH F G CSCGD W
Sbjct: 779 LRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 179 bits (453), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 217/458 (47%), Gaps = 38/458 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + VS+ L G+A D + +Y+ + ++G L+ F++ L + S ++
Sbjct: 110 MPERNNVSFVTLAQGYACQ----DPIGLYSRLHREG-HELNPHVFTSFLKLFVSLDKAEI 164
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+H I+K G+ S FVG+ L++ Y+ G + A+ F+ + K+IV++ +++ +
Sbjct: 165 CPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVE 224
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G E+S +L MR+ G + +TF +
Sbjct: 225 NGYFEDSLKLLSC-------------------------------MRMAGFMPNNYTFDTA 253
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A GL A + K +H I++ + + VG L+ +Y + + A VF M +V
Sbjct: 254 LKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDV 313
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V W+ M+ + QNG EAV +F M+ + P++FTL S+++ CA G Q HG
Sbjct: 314 VPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGL 373
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ G I VSNAL+ Y KC ++ + +LF E++ ++EVSW ++ GY G+ +
Sbjct: 374 VVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKA 433
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+F + L + + EVT L AC+ ++ G + +K + + + +ID
Sbjct: 434 FSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNS-LID 492
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
+ ++ G ++ A+S N+M D W L+S HG
Sbjct: 493 MYAKCGDIKFAQSVFNEME-TIDVASWNALISGYSTHG 529
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 175/361 (48%), Gaps = 36/361 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP +D V W+ +I+ +G N+AV ++ + +++ + T S++L + +C L
Sbjct: 308 MPKNDVVPWSFMIARFCQNGFCNEAVDLF-IRMREAFVVPNEFTLSSILNGCAIGKCSGL 366
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G Q+HG ++K GF ++V + L+D+YAK + A + F EL KN
Sbjct: 367 GEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKN------------- 413
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+SW T+I G G +A +FRE +++ + TF S
Sbjct: 414 ------------------EVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSA 455
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC L +++ G Q+H I+ ++ V V ++L+DMY KC IK+A+SVF M +V
Sbjct: 456 LGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDV 515
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-FHG 299
SW A++ GY +G +A++I M+ +P+ T V+S C+N +++G + F
Sbjct: 516 ASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFES 575
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKAN 358
G+ + +V G+ G ++ + +L + V W A++S A + N
Sbjct: 576 MIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLS--ASMNQNN 633
Query: 359 E 359
E
Sbjct: 634 E 634
Score = 142 bits (359), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 182/402 (45%), Gaps = 42/402 (10%)
Query: 55 RRCVDL-----GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIV 109
RRC+ + IH ILK G +F + L++ Y K G DA FDE+PE+N V
Sbjct: 57 RRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNV 116
Query: 110 MYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG 169
+ T+ G ++ I L+ + EG
Sbjct: 117 SFVTLAQGYAC-----------------------------------QDPIGLYSRLHREG 141
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
++ F S L L E +H+ I++ + N FVG+AL++ Y C S+ A
Sbjct: 142 HELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSAR 201
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
+VF + K++V W ++ Y +NG E+++K+ M+ G P+++T + + + L
Sbjct: 202 TVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLG 261
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
+ + HG+ L T + V L+ Y + G++ D+ ++FNEM D V W+ +++
Sbjct: 262 AFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIA 321
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
+ + G NE +DLF +M + P+E TL +L+ C+ G ++VK
Sbjct: 322 RFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDL 381
Query: 410 PIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLL 451
I+ +ID+ ++ +++ A ++ + + W T++
Sbjct: 382 DIYVS-NALIDVYAKCEKMDTAVKLFAELS-SKNEVSWNTVI 421
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 122/283 (43%), Gaps = 10/283 (3%)
Query: 172 MDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESV 231
+D +G++L C K IH I++ ++F + L++ Y K K A ++
Sbjct: 47 LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 232 FRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASL 291
F M +N VS+ + GY ++ + ++ + R G E + S + +L
Sbjct: 107 FDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKA 162
Query: 292 EEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGY 351
E H + G S V AL+ Y CG+++ + +F + +D V W +VS Y
Sbjct: 163 EICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCY 222
Query: 352 AKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVE--KGRHYFEIMVKEYGIR 409
+ G +++ L M G P+ T L A G + KG H +I+ Y +
Sbjct: 223 VENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHG-QILKTCYVLD 281
Query: 410 PIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
P ++ + ++ G + +A N+MP D + W+ +++
Sbjct: 282 PRVG--VGLLQLYTQLGDMSDAFKVFNEMP-KNDVVPWSFMIA 321
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 436 bits (1121), Expect = e-121, Method: Compositional matrix adjust.
Identities = 241/679 (35%), Positives = 371/679 (54%), Gaps = 63/679 (9%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + VSW +I G+A DAV ++ M++D + +T ++ + ++
Sbjct: 195 MSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET 254
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G +++ I G + S LVDMY K I AKR FDE N+ + N M + +R
Sbjct: 255 GEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR 314
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+GL REA+ +F M G+ D+ + S
Sbjct: 315 QGLT-------------------------------REALGVFNLMMDSGVRPDRISMLSA 343
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
+++C L + GK H +++RN + + +AL+DMY KC A +F M+ K V
Sbjct: 344 ISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTV 403
Query: 241 VSWTAMLVGYGQNG-------------------------------CSEEAVKIFCNMQ-R 268
V+W +++ GY +NG EEA+++FC+MQ +
Sbjct: 404 VTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQ 463
Query: 269 NGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIED 328
G+ D T+ S+ S+C +L +L+ + G+ + + LV + +CG+ E
Sbjct: 464 EGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPES 523
Query: 329 SHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSR 388
+ +FN + RD +WTA + A G A I+LF+ M+ GLKPD V +G L+ACS
Sbjct: 524 AMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSH 583
Query: 389 AGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWA 448
GLV++G+ F M+K +G+ P HY CM+D+L RAG LEEA I MP P+ + W
Sbjct: 584 GGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWN 643
Query: 449 TLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKG 508
+LL++CR+ GNVE+ +AAE + L P SYVLLS++YAS G+W+ ++++R +M+EKG
Sbjct: 644 SLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKG 703
Query: 509 VRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVE 568
+RK PG S I+ + + H F++ D S P I A L++++++ G+VPD+S+VL DV+
Sbjct: 704 LRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVD 763
Query: 569 LSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVR 628
EKI ML+ HSEKLA+A+GL+ G IR+VKNLRVCSDCH+ K+ SK+ REI++R
Sbjct: 764 EKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILR 823
Query: 629 DAVRFHLFKNGECSCGDFW 647
D RFH + G+CSCGDFW
Sbjct: 824 DNNRFHYIRQGKCSCGDFW 842
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 146/539 (27%), Positives = 245/539 (45%), Gaps = 104/539 (19%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
+N LI G+AS G N+A+ ++ M+ G+ + TF L + R G QIHG I
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISP-DKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+K G+ +FV + LV YA+ G + + +R
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGEL-------------------------------DSAR 189
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDL-FREMRLEGLAMDQFTFGSVLTACGGL 187
++F M +++ +SWT+MI G + ++A+DL FR +R E + + T V++AC L
Sbjct: 190 KVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKL 249
Query: 188 LALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAML 247
LE G++++AFI + + N + SALVDMY KC +I A+ +F N+ AM
Sbjct: 250 EDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMA 309
Query: 248 VGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
Y + G + EA+ +F M +G+ PD ++ S ISSC+ L ++ G HG L G
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFE 369
Query: 308 SFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKAN--------- 358
S+ + NAL+ Y KC + + R+F+ M+ + V+W ++V+GY + G+ +
Sbjct: 370 SWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM 429
Query: 359 ----------------------ETIDLFEKMLSH-GLKPDEVTLIGVLSACSRAGLVEKG 395
E I++F M S G+ D VT++ + SAC G ++
Sbjct: 430 PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLA 489
Query: 396 R--HYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP-------------- 439
+ +Y+ +++ GI+ T ++D+ SR G E A S N +
Sbjct: 490 KWIYYY---IEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAM 546
Query: 440 --------------------FPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNP 478
PD + + L++C G V+ GK S+L+L +P
Sbjct: 547 AMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSP 605
Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 136/253 (53%), Gaps = 6/253 (2%)
Query: 190 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC---KSIKYAESVFR-TMAWKNVVSWTA 245
++E K H + + ++V + LV C+ +S+ +A+ VF + ++ + +
Sbjct: 45 IDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNS 104
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
++ GY +G EA+ +F M +GI PD +T +S+CA + G Q HG + G
Sbjct: 105 LIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMG 164
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
+ V N+LV FY +CG ++ + ++F+EM+ R+ VSWT+++ GYA+ A + +DLF
Sbjct: 165 YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFF 224
Query: 366 KML-SHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSR 424
+M+ + P+ VT++ V+SAC++ +E G + ++ GI + ++D+ +
Sbjct: 225 RMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAF-IRNSGIEVNDLMVSALVDMYMK 283
Query: 425 AGRLEEAKSFINK 437
++ AK ++
Sbjct: 284 CNAIDVAKRLFDE 296
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 436 bits (1120), Expect = e-121, Method: Compositional matrix adjust.
Identities = 213/522 (40%), Positives = 325/522 (62%), Gaps = 1/522 (0%)
Query: 127 SRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGG 186
+R LF M + D + + +M G + E LF E+ +G+ D +TF S+L AC
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 187 LLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAM 246
ALEEG+Q+H ++ DNV+V L++MY +C+ + A VF + VV + AM
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 247 LVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGL 306
+ GY + EA+ +F MQ ++P++ TL SV+SSCA L SL+ G H +
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
++ V+ AL+ + KCG+++D+ +F +M +D +W+A++ YA GKA +++ +FE+
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFER 321
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
M S ++PDE+T +G+L+ACS G VE+GR YF MV ++GI P HY M+D+LSRAG
Sbjct: 322 MRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAG 381
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
LE+A FI+K+P P + W LL++C H N+++ + +E + ELD + YV+LS+
Sbjct: 382 NLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSN 441
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
+YA KW++V LR+ M+++ K PGCS I+ + VH F + D + +++ L++
Sbjct: 442 LYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDE 501
Query: 547 LNRKMIKEGYVPDMSSVLH-DVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLR 605
+ +++ GYVPD S V+H ++ EK L +HSEKLAI FGLL PPG IRVVKNLR
Sbjct: 502 MVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLR 561
Query: 606 VCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
VC DCHNA K IS I R++++RD RFH F++G+CSCGDFW
Sbjct: 562 VCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 185/365 (50%), Gaps = 38/365 (10%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V +N + G++ + + ++ +L+DG+ TF ++L + + ++ GRQ+
Sbjct: 93 DIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILP-DNYTFPSLLKACAVAKALEEGRQL 151
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H +K G V+V L++MY + + A+ FD + E +V YN MI
Sbjct: 152 HCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMI--------- 202
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
TG + EA+ LFREM+ + L ++ T SVL++C
Sbjct: 203 ----------------------TGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSC 240
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L +L+ GK IH + ++ V V +AL+DM+ KC S+ A S+F M +K+ +W+
Sbjct: 241 ALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWS 300
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
AM+V Y +G +E+++ +F M+ ++PD+ T ++++C++ +EEG ++ + +
Sbjct: 301 AMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSK 360
Query: 305 -GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSGYAKFGKANETID 362
G++ I ++V + GN+ED++ +++ + + W L++ + ++ +D
Sbjct: 361 FGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACS----SHNNLD 416
Query: 363 LFEKM 367
L EK+
Sbjct: 417 LAEKV 421
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 146/276 (52%), Gaps = 6/276 (2%)
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC---KSIKYAESVFRTMAWKNVVSWTA 245
+L E QI A+ I++ +D FV L++ + S+ YA +F M+ ++V + +
Sbjct: 41 SLRELMQIQAYAIKSHIEDVSFVAK-LINFCTESPTESSMSYARHLFEAMSEPDIVIFNS 99
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
M GY + E +F + +GI PD++T S++ +CA +LEEG Q H S+ G
Sbjct: 100 MARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLG 159
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
L + V L+ Y +C +++ + +F+ + V + A+++GYA+ + NE + LF
Sbjct: 160 LDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFR 219
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
+M LKP+E+TL+ VLS+C+ G ++ G+ + K++ T +ID+ ++
Sbjct: 220 EMQGKYLKPNEITLLSVLSSCALLGSLDLGK-WIHKYAKKHSFCKYVKVNTALIDMFAKC 278
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVE 461
G L++A S KM + D W+ ++ + HG E
Sbjct: 279 GSLDDAVSIFEKMRY-KDTQAWSAMIVAYANHGKAE 313
Score = 40.0 bits (92), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + D +W+ +I +A+HG ++ ++ M + + ITF +L S V+
Sbjct: 291 MRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENV-QPDEITFLGLLNACSHTGRVEE 349
Query: 61 GRQIHGHIL-KFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELP 104
GR+ ++ KFG + +VD+ ++ G + DA D+LP
Sbjct: 350 GRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLP 394
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 436 bits (1120), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/652 (34%), Positives = 363/652 (55%), Gaps = 41/652 (6%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRI-----TFSTMLIMSSSR 55
+P WN +I G++ + DA+ +Y+ M L+R+ TF +L S
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNM------QLARVSPDSFTFPHLLKACSGL 132
Query: 56 RCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMI 115
+ +GR +H + + GF + VFV + L+ +YAK + A+ F+ LP
Sbjct: 133 SHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLP----------- 181
Query: 116 TGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQF 175
+ ++ +SWT +++ QNG EA+++F +MR + D
Sbjct: 182 ------------------LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWV 223
Query: 176 TFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTM 235
SVL A L L++G+ IHA +++ + + +L MY KC + A+ +F M
Sbjct: 224 ALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKM 283
Query: 236 AWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGT 295
N++ W AM+ GY +NG + EA+ +F M + PD ++ S IS+CA + SLE+
Sbjct: 284 KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQAR 343
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
+ + + +S+AL+ + KCG++E + +F+ RD V W+A++ GY G
Sbjct: 344 SMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHG 403
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
+A E I L+ M G+ P++VT +G+L AC+ +G+V +G +F M ++ I P HY
Sbjct: 404 RAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHY 462
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
C+ID+L RAG L++A I MP P W LLS+C+ H +VE+G++AA+ L +DP
Sbjct: 463 ACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDP 522
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSP 535
N YV LS++YA+ WD V+++R M+EKG+ KD GCSW++ + R+ F D S P
Sbjct: 523 SNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHP 582
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
++I ++E + ++ + G+V + + LHD+ E + L HSE++AIA+GL+ P G
Sbjct: 583 RYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQG 642
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
P+R+ KNLR C +CH ATK ISK+ REI+VRD RFH FK+G CSCGD+W
Sbjct: 643 TPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 193 bits (491), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 201/399 (50%), Gaps = 35/399 (8%)
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
+QIH +L G F+ + L+ + G I A++ FD+LP I
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQI------------- 84
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
W +I G +N ++A+ ++ M+L ++ D FTF +L
Sbjct: 85 ------------------FPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW--KN 239
AC GL L+ G+ +HA + R +VFV + L+ +Y KC+ + A +VF + +
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT 186
Query: 240 VVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHG 299
+VSWTA++ Y QNG EA++IF M++ ++PD L SV+++ L L++G H
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ GL + +L T Y KCG + + LF++M + + W A++SGYAK G A E
Sbjct: 247 SVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYARE 306
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
ID+F +M++ ++PD +++ +SAC++ G +E+ R +E V R + +I
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYE-YVGRSDYRDDVFISSALI 365
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHG 458
D+ ++ G +E A+ ++ D + W+ ++ +HG
Sbjct: 366 DMFAKCGSVEGARLVFDRT-LDRDVVVWSAMIVGYGLHG 403
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 435 bits (1119), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/641 (36%), Positives = 364/641 (56%), Gaps = 36/641 (5%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
+N LI+G ++ ++ + ++ + K GL L TF +L + LG +H +
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKHGL-YLHGFTFPLVLKACTRASSRKLGIDLHSLV 137
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+K GF V + L+ +Y+ G + DA + FDE+P++++
Sbjct: 138 VKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSV-------------------- 177
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
++WT + +G +G REAIDLF++M G+ D + VL+AC +
Sbjct: 178 -----------VTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVG 226
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
L+ G+ I ++ + + N FV + LV++Y KC ++ A SVF +M K++V+W+ M+
Sbjct: 227 DLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQ 286
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT--GL 306
GY N +E +++F M + ++PD F++ +SSCA+L +L+ G G SL+
Sbjct: 287 GYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEW--GISLIDRHEF 344
Query: 307 ISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEK 366
++ + ++NAL+ Y KCG + +F EM +D V A +SG AK G + +F +
Sbjct: 345 LTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQ 404
Query: 367 MLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAG 426
G+ PD T +G+L C AGL++ G +F + Y ++ +HY CM+D+ RAG
Sbjct: 405 TEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAG 464
Query: 427 RLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSS 486
L++A I MP P+AI W LLS CR+ + ++ + + L+ L+P+N +YV LS+
Sbjct: 465 MLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSN 524
Query: 487 IYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEK 546
IY+ G+WD +++R M +KG++K PG SWI+ + +VH F ADD S P SD+IYA+LE
Sbjct: 525 IYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLED 584
Query: 547 LNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRV 606
L +M G+VP V DVE EK ++L +HSEKLA+A GL+ G IRVVKNLRV
Sbjct: 585 LGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRV 644
Query: 607 CSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
C DCH K ISKIT+REI+VRD RFH F NG CSC D+W
Sbjct: 645 CGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 152 bits (383), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 164/337 (48%), Gaps = 21/337 (6%)
Query: 114 MITGLLRRGL----VEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG 169
++ LL+R L + S LF + + + ++I G + N L E +DLF +R G
Sbjct: 47 LVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHG 106
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
L + FTF VL AC + + G +H+ +++ +V ++L+ +Y + A
Sbjct: 107 LYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAH 166
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
+F + ++VV+WTA+ GY +G EA+ +F M G++PD + + V+S+C ++
Sbjct: 167 KLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVG 226
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
L+ G + V LV Y KCG +E + +F+ M +D V+W+ ++
Sbjct: 227 DLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQ 286
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIR 409
GYA E I+LF +ML LKPD+ +++G LS+C+ G ++ G E+GI
Sbjct: 287 GYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLG---------EWGIS 337
Query: 410 PIHDH--------YTCMIDILSRAGRLEEAKSFINKM 438
I H +ID+ ++ G + +M
Sbjct: 338 LIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM 374
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 175/354 (49%), Gaps = 38/354 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P V+W L SG+ + G +A+ ++ M++ G+ S + + ++S+ DL
Sbjct: 172 IPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDS---YFIVQVLSACVHVGDL 228
Query: 61 --GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGL 118
G I ++ + FV + LV++YAK G +
Sbjct: 229 DSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKM------------------------- 263
Query: 119 LRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFG 178
E++R +F M +KD ++W+TMI G N +E I+LF +M E L DQF+
Sbjct: 264 ------EKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIV 317
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWK 238
L++C L AL+ G+ + I R++ N+F+ +AL+DMY KC ++ VF+ M K
Sbjct: 318 GFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEK 377
Query: 239 NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ-F 297
++V A + G +NG + + +F ++ GI PD T ++ C + +++G + F
Sbjct: 378 DIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFF 437
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
+ S V L + +V +G+ G ++D++RL +M +R + + W AL+SG
Sbjct: 438 NAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 165/352 (46%), Gaps = 38/352 (10%)
Query: 194 KQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQN 253
KQIH +I + + F+ + L+ + KY+ +F + N+ + +++ G+ N
Sbjct: 30 KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNN 89
Query: 254 GCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVS 313
E + +F +++++G+ FT V+ +C +S + G H + G +
Sbjct: 90 HLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAM 149
Query: 314 NALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLK 373
+L++ Y G + D+H+LF+E+ R V+WTAL SGY G+ E IDLF+KM+ G+K
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVK 209
Query: 374 PDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKS 433
PD ++ VLSAC G ++ G + M +E ++ T ++++ ++ G++E+A+S
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKYM-EEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268
Query: 434 FINKM------------------PFP----------------PDAIGWATLLSSCRIHGN 459
+ M FP PD LSSC G
Sbjct: 269 VFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGA 328
Query: 460 VEIGKWAAESLLELDPYNPASYV--LLSSIYASKGKWDHVSQLRRTMREKGV 509
+++G+W SL++ + ++ L +YA G ++ + M+EK +
Sbjct: 329 LDLGEWGI-SLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDI 379
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 431 bits (1108), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/648 (36%), Positives = 372/648 (57%), Gaps = 34/648 (5%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M D VS+N +I G+ V ++V+++ L +L +T S++L R + L
Sbjct: 268 MDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDL--LTVSSVLRACGHLRDLSL 325
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+ I+ ++LK GF V + L+D+YAK G MIT
Sbjct: 326 AKYIYNYMLKAGFVLESTVRNILIDVYAKCG---------------------DMIT---- 360
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+R +F M+ KD++SW ++I+G +Q+G EA+ LF+ M + D T+ +
Sbjct: 361 ------ARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLML 414
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
++ L L+ GK +H+ I++ ++ V +AL+DMY KC + + +F +M +
Sbjct: 415 ISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDT 474
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
V+W ++ + G +++ M+++ + PD T + CA+LA+ G + H
Sbjct: 475 VTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCC 534
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
L G S + + NAL+ Y KCG +E+S R+F M+ RD V+WT ++ Y +G+ +
Sbjct: 535 LLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKA 594
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
++ F M G+ PD V I ++ ACS +GLV++G FE M Y I P+ +HY C++D
Sbjct: 595 LETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVD 654
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+LSR+ ++ +A+ FI MP PDA WA++L +CR G++E + + ++EL+P +P
Sbjct: 655 LLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGY 714
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
+L S+ YA+ KWD VS +R+++++K + K+PG SWI+ VH+FS+ D S+P S+ I
Sbjct: 715 SILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAI 774
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDV-ELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIR 599
Y LE L M KEGY+PD V ++ E EK +++ HSE+LAIAFGLL PG P++
Sbjct: 775 YKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQ 834
Query: 600 VVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
V+KNLRVC DCH TK ISKI REILVRDA RFHLFK+G CSC D W
Sbjct: 835 VMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 149/491 (30%), Positives = 236/491 (48%), Gaps = 40/491 (8%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D VSWN LISG++SHG +A+++Y+ LK+ T S++L + V
Sbjct: 167 MPVRDLVSWNSLISGYSSHGYYEEALEIYH-ELKNSWIVPDSFTVSSVLPAFGNLLVVKQ 225
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+ +HG LK G S V V + LV MY K DA+R FDE+ ++ V YNTMI G L+
Sbjct: 226 GQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLK 285
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
+VEES R+F E +D F+ D T SV
Sbjct: 286 LEMVEESVRMF------------------------LENLDQFKP--------DLLTVSSV 313
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L ACG L L K I+ ++++ V + L+D+Y KC + A VF +M K+
Sbjct: 314 LRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDT 373
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW +++ GY Q+G EA+K+F M + D T +IS LA L+ G H
Sbjct: 374 VSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSN 433
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
+ +G+ ++VSNAL+ Y KCG + DS ++F+ M D V+W ++S +FG
Sbjct: 434 GIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATG 493
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ + +M + PD T + L C+ G+ +++ +G +I+
Sbjct: 494 LQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQIGNALIE 552
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN--P 478
+ S+ G LE + +M D + W ++ + ++G G+ A E+ +++ P
Sbjct: 553 MYSKCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGE---GEKALETFADMEKSGIVP 608
Query: 479 ASYVLLSSIYA 489
S V ++ IYA
Sbjct: 609 DSVVFIAIIYA 619
Score = 189 bits (480), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 229/462 (49%), Gaps = 35/462 (7%)
Query: 2 PFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLG 61
P + WN +I + +G +A++ Y L++ + + TF +++ + ++G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYG-KLRESKVSPDKYTFPSVIKACAGLFDAEMG 125
Query: 62 RQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRR 121
++ IL GF S +FVG+ LVDMY+++GL+ A++ FDE+P +++V +N++I+G
Sbjct: 126 DLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSH 185
Query: 122 GLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVL 181
G E EA++++ E++ + D FT SVL
Sbjct: 186 GYYE-------------------------------EALEIYHELKNSWIVPDSFTVSSVL 214
Query: 182 TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVV 241
A G LL +++G+ +H F +++ V V + LV MY K + A VF M ++ V
Sbjct: 215 PAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSV 274
Query: 242 SWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRS 301
S+ M+ GY + EE+V++F + +PD T+ SV+ +C +L L +
Sbjct: 275 SYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYM 333
Query: 302 LVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETI 361
L G + TV N L+ Y KCG++ + +FN M +D VSW +++SGY + G E +
Sbjct: 334 LKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAM 393
Query: 362 DLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDI 421
LF+ M+ + D +T + ++S +R ++ G+ +K GI +ID+
Sbjct: 394 KLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKS-GICIDLSVSNALIDM 452
Query: 422 LSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIG 463
++ G + ++ + M D + W T++S+C G+ G
Sbjct: 453 YAKCGEVGDSLKIFSSMG-TGDTVTWNTVISACVRFGDFATG 493
Score = 176 bits (446), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 205/408 (50%), Gaps = 46/408 (11%)
Query: 51 MSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL-PEKNIV 109
+SSS +L R+IH ++ G S F L+D Y+ + F + P KN+
Sbjct: 14 LSSSSNLNEL-RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVY 72
Query: 110 MYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEG 169
+ W ++I +NGL EA++ + ++R
Sbjct: 73 L-------------------------------WNSIIRAFSKNGLFPEALEFYGKLRESK 101
Query: 170 LAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAE 229
++ D++TF SV+ AC GL E G ++ I+ + ++FVG+ALVDMY + + A
Sbjct: 102 VSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRAR 161
Query: 230 SVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLA 289
VF M +++VSW +++ GY +G EEA++I+ ++ + I PD FT+ SV+ + NL
Sbjct: 162 QVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLL 221
Query: 290 SLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVS 349
+++G HG +L +G+ S + V+N LV Y K D+ R+F+EM+VRD VS+ ++
Sbjct: 222 VVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMIC 281
Query: 350 GYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK----- 404
GY K E++ +F + L KPD +T+ VL AC + ++ + M+K
Sbjct: 282 GYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVL 340
Query: 405 EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLS 452
E +R I +ID+ ++ G + A+ N M D + W +++S
Sbjct: 341 ESTVRNI------LIDVYAKCGDMITARDVFNSMEC-KDTVSWNSIIS 381
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/508 (41%), Positives = 322/508 (63%), Gaps = 2/508 (0%)
Query: 142 WTTMITGLMQNGLEREAIDLFREMRLEGLA-MDQFTFGSVLTACGGLLALEEGKQIHAFI 200
W T+I G + G A L+REMR+ GL D T+ ++ A + + G+ IH+ +
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 201 IRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAV 260
IR+ ++V ++L+ +Y C + A VF M K++V+W +++ G+ +NG EEA+
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 261 KIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFY 320
++ M GI+PD FT+ S++S+CA + +L G + H + GL + SN L+ Y
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267
Query: 321 GKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLS-HGLKPDEVTL 379
+CG +E++ LF+EM ++ VSWT+L+ G A G E I+LF+ M S GL P E+T
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 327
Query: 380 IGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP 439
+G+L ACS G+V++G YF M +EY I P +H+ CM+D+L+RAG++++A +I MP
Sbjct: 328 VGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP 387
Query: 440 FPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQ 499
P+ + W TLL +C +HG+ ++ ++A +L+L+P + YVLLS++YAS+ +W V +
Sbjct: 388 MQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQK 447
Query: 500 LRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPD 559
+R+ M GV+K PG S ++ +RVH F D S P SD IYA+L+++ ++ EGYVP
Sbjct: 448 IRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQ 507
Query: 560 MSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISK 619
+S+V DVE EK + +HSEK+AIAF L+ P PI VVKNLRVC+DCH A K +SK
Sbjct: 508 ISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSK 567
Query: 620 ITQREILVRDAVRFHLFKNGECSCGDFW 647
+ REI+VRD RFH FKNG CSC D+W
Sbjct: 568 VYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 191/395 (48%), Gaps = 40/395 (10%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN LI G+A G+ A +Y M GL T+ ++ ++ V LG IH +
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
++ GFGS ++V + L+ +YA G + A + FD++PE
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE----------------------- 184
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
KD ++W ++I G +NG EA+ L+ EM +G+ D FT S+L+AC +
Sbjct: 185 --------KDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIG 236
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
AL GK++H ++I+ N+ + L+D+Y +C ++ A+++F M KN VSWT+++V
Sbjct: 237 ALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIV 296
Query: 249 GYGQNGCSEEAVKIFCNMQRN-GIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLI 307
G NG +EA+++F M+ G+ P + T ++ +C++ ++EG ++ R I
Sbjct: 297 GLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKI 356
Query: 308 S-FITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYAKFGKANETIDLFE 365
I +V + G ++ ++ M ++ V W L+ G ++ + F
Sbjct: 357 EPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFA 414
Query: 366 KMLSHGLKP----DEVTLIGVLSACSRAGLVEKGR 396
++ L+P D V L + ++ R V+K R
Sbjct: 415 RIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIR 449
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 157/289 (54%), Gaps = 11/289 (3%)
Query: 186 GLLALEEGKQIHAFIIRNDHK-DNVFVGSALVDMYCKCKS---IKYAESVFRTMAWK-NV 240
G+ ++ + +QIHAF IR+ + +G L+ S + YA VF + NV
Sbjct: 26 GVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINV 85
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNG-IEPDDFTLGSVISSCANLASLEEGTQFHG 299
W ++ GY + G S A ++ M+ +G +EPD T +I + +A + G H
Sbjct: 86 FIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHS 145
Query: 300 RSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANE 359
+ +G S I V N+L+ Y CG++ ++++F++M +D V+W ++++G+A+ GK E
Sbjct: 146 VVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEE 205
Query: 360 TIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMI 419
+ L+ +M S G+KPD T++ +LSAC++ G + G+ M+K R +H ++
Sbjct: 206 ALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS-NVLL 264
Query: 420 DILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAE 468
D+ +R GR+EEAK+ ++M +++ W +L+ ++G GK A E
Sbjct: 265 DLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNG---FGKEAIE 309
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 133/287 (46%), Gaps = 42/287 (14%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP D V+WN +I+G A +G +A+ +Y M G+ T ++L + + L
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGI-KPDGFTIVSLLSACAKIGALTL 240
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
G+++H +++K G + + L+D+YA+ G + +AK FDE+ +KN V + ++I GL
Sbjct: 241 GKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAV 300
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMR-LEGLAMDQFTFGS 179
G +EAI+LF+ M EGL + TF
Sbjct: 301 NG-------------------------------FGKEAIELFKYMESTEGLLPCEITFVG 329
Query: 180 VLTACGGLLALEEGKQIHAFIIRNDHKDNVFVG--SALVDMYCKCKSIKYAESVFRTMAW 237
+L AC ++EG + + +R ++K + +VD+ + +K A ++M
Sbjct: 330 ILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPM 388
Query: 238 K-NVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPD---DFTLGS 280
+ NVV W +L +G S+ A F +Q +EP+ D+ L S
Sbjct: 389 QPNVVIWRTLLGACTVHGDSDLAE--FARIQILQLEPNHSGDYVLLS 433
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 430 bits (1106), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/652 (36%), Positives = 368/652 (56%), Gaps = 41/652 (6%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D SWN +I+ A G +A+ ++ M K L +R +F + SS + G+Q
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYP-TRSSFPCAIKACSSLFDIFSGKQT 98
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
H FG+ S +FV S L IVMY+T G +
Sbjct: 99 HQQAFVFGYQSDIFVSSAL------------------------IVMYSTC-------GKL 127
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLE------GLAMDQFTFG 178
E++R++F + ++ +SWT+MI G NG +A+ LF+++ ++ + +D
Sbjct: 128 EDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLV 187
Query: 179 SVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKS--IKYAESVFRTMA 236
SV++AC + A + IH+F+I+ V VG+ L+D Y K + A +F +
Sbjct: 188 SVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIV 247
Query: 237 WKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEP-DDFTLGSVISSCANLASLEEGT 295
K+ VS+ +++ Y Q+G S EA ++F + +N + + TL +V+ + ++ +L G
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGK 307
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFG 355
H + + GL + V +++ Y KCG +E + + F+ M ++ SWTA+++GY G
Sbjct: 308 CIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHG 367
Query: 356 KANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY 415
A + ++LF M+ G++P+ +T + VL+ACS AGL +G +F M +G+ P +HY
Sbjct: 368 HAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHY 427
Query: 416 TCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDP 475
CM+D+L RAG L++A I +M PD+I W++LL++CRIH NVE+ + + L ELD
Sbjct: 428 GCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDS 487
Query: 476 YNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSP 535
N Y+LLS IYA G+W V ++R M+ +G+ K PG S ++ VH+F D P
Sbjct: 488 SNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHP 547
Query: 536 YSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPG 595
++IY L +LNRK+++ GYV + SSV HDV+ EK L HSEKLAIAFG++ PG
Sbjct: 548 QREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPG 607
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
+ VVKNLRVCSDCHN K ISKI RE +VRDA RFH FK+G CSCGD+W
Sbjct: 608 STVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 181/360 (50%), Gaps = 41/360 (11%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCV-- 58
+P + VSW +I G+ +G+ DAV ++ +L D + + +M ++S C
Sbjct: 137 IPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRV 196
Query: 59 ---DLGRQIHGHILKFGFGSYVFVGSPLVDMYAK--LGLIYDAKRGFDELPEKNIVMYNT 113
L IH ++K GF V VG+ L+D YAK G + A++ FD++ +K+ V YN
Sbjct: 197 PAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYN- 255
Query: 114 MITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM-RLEGLAM 172
++++ Q+G+ EA ++FR + + + +
Sbjct: 256 ------------------------------SIMSVYAQSGMSNEAFEVFRRLVKNKVVTF 285
Query: 173 DQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVF 232
+ T +VL A AL GK IH +IR +D+V VG++++DMYCKC ++ A F
Sbjct: 286 NAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAF 345
Query: 233 RTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLE 292
M KNV SWTAM+ GYG +G + +A+++F M +G+ P+ T SV+++C++
Sbjct: 346 DRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHV 405
Query: 293 EGTQ-FHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR-DEVSWTALVSG 350
EG + F+ G+ + +V G+ G ++ ++ L M ++ D + W++L++
Sbjct: 406 EGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust.
Identities = 236/652 (36%), Positives = 347/652 (53%), Gaps = 70/652 (10%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
+P + + N++I + ++G + VKV+ M + TF +L S + +
Sbjct: 100 IPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNV-RPDHYTFPCVLKACSCSGTIVI 158
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GR+IHG K G S +FVG+ LV MY K G + +A+ DE+
Sbjct: 159 GRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEM----------------- 201
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
SRR D +SW +++ G QN +A+++ REM ++ D T S+
Sbjct: 202 ------SRR--------DVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASL 247
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L A + N +NV Y + +F M K++
Sbjct: 248 LPA-----------------VSNTTTENVM----------------YVKDMFFKMGKKSL 274
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGR 300
VSW M+ Y +N EAV+++ M+ +G EPD ++ SV+ +C + ++L G + HG
Sbjct: 275 VSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGY 334
Query: 301 SLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANET 360
LI + + NAL+ Y KCG +E + +F M RD VSWTA++S Y G+ +
Sbjct: 335 IERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDA 394
Query: 361 IDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMID 420
+ LF K+ GL PD + + L+ACS AGL+E+GR F++M Y I P +H CM+D
Sbjct: 395 VALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVD 454
Query: 421 ILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPAS 480
+L RAG+++EA FI M P+ W LL +CR+H + +IG AA+ L +L P
Sbjct: 455 LLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGY 514
Query: 481 YVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSSPYSDQI 540
YVLLS+IYA G+W+ V+ +R M+ KG++K+PG S ++ +H F D S P SD+I
Sbjct: 515 YVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEI 574
Query: 541 YAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIP-----PG 595
Y EL+ L +KM + GYVPD S LHDVE +K L HSEKLAI F L+
Sbjct: 575 YRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSN 634
Query: 596 LPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
IR+ KNLR+C DCH A K IS+IT REI++RD RFH+F+ G CSCGD+W
Sbjct: 635 NTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 152/326 (46%), Gaps = 26/326 (7%)
Query: 167 LEGLAMDQ-------FTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMY 219
L L +DQ F G VL + L + +H+ II D + N +G L+ Y
Sbjct: 28 LPKLELDQKSPQETVFLLGQVLDTYPDIRTL---RTVHSRIILEDLRCNSSLGVKLMRAY 84
Query: 220 CKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLG 279
K + A VF + +NV+ M+ Y NG E VK+F M + PD +T
Sbjct: 85 ASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFP 144
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
V+ +C+ ++ G + HG + GL S + V N LV+ YGKCG + ++ + +EM+ R
Sbjct: 145 CVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR 204
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
D VSW +LV GYA+ + ++ +++ +M S + D T+ +L A S + Y
Sbjct: 205 DVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TTENVMYV 262
Query: 400 EIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMP---FPPDAIGWATLLSSC-- 454
+ M + G + + + MI + + EA ++M F PDA+ ++L +C
Sbjct: 263 KDMFFKMGKKSLVS-WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGD 321
Query: 455 --------RIHGNVEIGKWAAESLLE 472
+IHG +E K LLE
Sbjct: 322 TSALSLGKKIHGYIERKKLIPNLLLE 347
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 429 bits (1102), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/651 (36%), Positives = 369/651 (56%), Gaps = 24/651 (3%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
M + VSWN L+SG+ + + +A V+ LM + + ++++ M+ V
Sbjct: 74 MSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNV-----VSWTAMVKGYMQEGMVGE 128
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
+ + + S+ + L+D G I A++ +D +P K++V MI GL R
Sbjct: 129 AESLFWRMPERNEVSWTVMFGGLIDD----GRIDKARKLYDMMPVKDVVASTNMIGGLCR 184
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
G V+E+R +F M++++ ++WTTMITG QN A LF M + + ++ S+
Sbjct: 185 EGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK----TEVSWTSM 240
Query: 181 L---TACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAW 237
L T G + EE ++ V +A++ + + I A VF M
Sbjct: 241 LLGYTLSGRIEDAEEFFEVMPM-------KPVIACNAMIVGFGEVGEISKARRVFDLMED 293
Query: 238 KNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQF 297
++ +W M+ Y + G EA+ +F MQ+ G+ P +L S++S CA LASL+ G Q
Sbjct: 294 RDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQV 353
Query: 298 HGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKA 357
H + + V++ L+T Y KCG + + +F+ + +D + W +++SGYA G
Sbjct: 354 HAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLG 413
Query: 358 NETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTC 417
E + +F +M S G P++VTLI +L+ACS AG +E+G FE M ++ + P +HY+C
Sbjct: 414 EEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSC 473
Query: 418 MIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYN 477
+D+L RAG++++A I M PDA W LL +C+ H +++ + AA+ L E +P N
Sbjct: 474 TVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDN 533
Query: 478 PASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADDWSS-PY 536
+YVLLSSI AS+ KW V+ +R+ MR V K PGCSWI+ +VH+F+ + P
Sbjct: 534 AGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPE 593
Query: 537 SDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGL 596
I LEK + + + GY PD S VLHDV+ EK+ L+ HSE+LA+A+GLL +P G+
Sbjct: 594 QAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGV 653
Query: 597 PIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
PIRV+KNLRVC DCH A K ISK+T+REI++RDA RFH F NGECSC D+W
Sbjct: 654 PIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 145 bits (366), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 186/379 (49%), Gaps = 24/379 (6%)
Query: 83 LVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISW 142
+V Y GL +A++ FDE+ E+N+V +N +++G ++ ++ E+R +F M +++ +SW
Sbjct: 54 IVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSW 113
Query: 143 TTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIR 202
T M+ G MQ G+ EA LF M FG ++ +++ ++++ +
Sbjct: 114 TAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDG----RIDKARKLYDMMPV 169
Query: 203 NDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKI 262
D V + ++ C+ + A +F M +NVV+WT M+ GY QN + A K+
Sbjct: 170 KD----VVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKL 225
Query: 263 FCNM-QRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYG 321
F M ++ + LG +S +E+ +F + +I+ NA++ +G
Sbjct: 226 FEVMPEKTEVSWTSMLLGYTLS-----GRIEDAEEFFEVMPMKPVIA----CNAMIVGFG 276
Query: 322 KCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIG 381
+ G I + R+F+ M RD +W ++ Y + G E +DLF +M G++P +LI
Sbjct: 277 EVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLIS 336
Query: 382 VLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHY--TCMIDILSRAGRLEEAKSFINKMP 439
+LS C+ ++ GR +V+ + D Y + ++ + + G L +AK ++
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVR---CQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFS 393
Query: 440 FPPDAIGWATLLSSCRIHG 458
D I W +++S HG
Sbjct: 394 -SKDIIMWNSIISGYASHG 411
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 109/253 (43%), Gaps = 57/253 (22%)
Query: 225 IKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISS 284
I A F ++ +K + SW +++ GY NG +EA ++F D+ + +V+S
Sbjct: 33 INEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLF----------DEMSERNVVS- 81
Query: 285 CANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSW 344
N LV+ Y K I ++ +F M R+ VSW
Sbjct: 82 ----------------------------WNGLVSGYIKNRMIVEARNVFELMPERNVVSW 113
Query: 345 TALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVK 404
TA+V GY + G E LF +M +EV+ + G ++K R +++M
Sbjct: 114 TAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDKARKLYDMM-- 167
Query: 405 EYGIRPIHD--HYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEI 462
P+ D T MI L R GR++EA+ ++M + + W T+++ R + V++
Sbjct: 168 -----PVKDVVASTNMIGGLCREGRVDEARLIFDEMR-ERNVVTWTTMITGYRQNNRVDV 221
Query: 463 GKWAAESLLELDP 475
A L E+ P
Sbjct: 222 ----ARKLFEVMP 230
>sp|Q9LTF4|PP429_ARATH Putative pentatricopeptide repeat-containing protein At5g52630
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 588
Score = 428 bits (1100), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/600 (38%), Positives = 353/600 (58%), Gaps = 33/600 (5%)
Query: 49 LIMSSSR-RCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKN 107
L++SS+R R G Q+HG+++K G V + L++ Y+K L +D
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFD------------ 68
Query: 108 IVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRL 167
SRR F K S +W+++I+ QN L +++ ++M
Sbjct: 69 -------------------SRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMA 109
Query: 168 EGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKY 227
L D S +C L + G+ +H ++ + +VFVGS+LVDMY KC I Y
Sbjct: 110 GNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVY 169
Query: 228 AESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCAN 287
A +F M +NVV+W+ M+ GY Q G +EEA+ +F + +D++ SVIS CAN
Sbjct: 170 ARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCAN 229
Query: 288 LASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
LE G Q HG S+ + S V ++LV+ Y KCG E ++++FNE+ V++ W A+
Sbjct: 230 STLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAM 289
Query: 348 VSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYG 407
+ YA+ + I+LF++M G+KP+ +T + VL+ACS AGLV++GR+YF+ M KE
Sbjct: 290 LKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM-KESR 348
Query: 408 IRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAA 467
I P HY ++D+L RAGRL+EA I MP P W LL+SC +H N E+ +AA
Sbjct: 349 IEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAA 408
Query: 468 ESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIF 527
+ + EL P + ++ LS+ YA+ G+++ ++ R+ +R++G +K+ G SW++ +++VH F
Sbjct: 409 DKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTF 468
Query: 528 SADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAF 587
+A + S +IY +L +L +M K GY+ D S VL +V+ EK + + +HSE+LAIAF
Sbjct: 469 AAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAF 528
Query: 588 GLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
GL+ P PIRV+KNLRVC DCHNA K++S T+R I+VRD RFH F++G+CSC D+W
Sbjct: 529 GLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 155/352 (44%), Gaps = 77/352 (21%)
Query: 1 MPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDL 60
MP + V+W+ ++ G+A G +A+ ++ L + L ++ +FS+++ + ++ ++L
Sbjct: 177 MPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLA-VNDYSFSSVISVCANSTLLEL 235
Query: 61 GRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLR 120
GRQIHG +K F S FVGS LV +Y+K G+ A + F+E+P KN+ ++N
Sbjct: 236 GRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWN-------- 287
Query: 121 RGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSV 180
M+ Q+ ++ I+LF+ M+L G+ + TF +V
Sbjct: 288 -----------------------AMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNV 324
Query: 181 LTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNV 240
L AC ++EG+ + + + ++LVDM
Sbjct: 325 LNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDM---------------------- 362
Query: 241 VSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSC-----ANLASLEEGT 295
G+ G +EA+++ NM I+P + G++++SC LA+
Sbjct: 363 ---------LGRAGRLQEALEVITNMP---IDPTESVWGALLTSCTVHKNTELAAFAADK 410
Query: 296 QFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTAL 347
F + +G+ I++SNA Y G ED+ + + R E T L
Sbjct: 411 VFELGPVSSGM--HISLSNA----YAADGRFEDAAKARKLLRDRGEKKETGL 456
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570
OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 426 bits (1095), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/643 (36%), Positives = 367/643 (57%), Gaps = 37/643 (5%)
Query: 7 VSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHG 66
V+WN LI+ H +AV++Y LM+ + + T S++ S ++ HG
Sbjct: 131 VTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLP-DEYTLSSVFKAFSDLSLEKEAQRSHG 189
Query: 67 HILKFGFG-SYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVE 125
+ G S VFVGS LVDMY K G +AK D + EK++V+
Sbjct: 190 LAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLI-------------- 235
Query: 126 ESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACG 185
T +I G Q G + EA+ F+ M +E + +++T+ SVL +CG
Sbjct: 236 -----------------TALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCG 278
Query: 186 GLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTA 245
L + GK IH ++++ + + ++L+ MY +C + + VF+ + + N VSWT+
Sbjct: 279 NLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTS 338
Query: 246 MLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTG 305
++ G QNG E A+ F M R+ I+P+ FTL S + C+NLA EEG Q HG G
Sbjct: 339 LISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYG 398
Query: 306 LISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLFE 365
+ L+ YGKCG + + +F+ ++ D +S ++ YA+ G E +DLFE
Sbjct: 399 FDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFE 458
Query: 366 KMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIMVKEYGIRPIHDHYTCMIDILSRA 425
+M++ GL+P++VT++ VL AC+ + LVE+G F+ K+ I +DHY CM+D+L RA
Sbjct: 459 RMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRA 517
Query: 426 GRLEEAKSFINKMPFPPDAIGWATLLSSCRIHGNVEIGKWAAESLLELDPYNPASYVLLS 485
GRLEEA+ ++ PD + W TLLS+C++H VE+ + +LE++P + + +L+S
Sbjct: 518 GRLEEAEMLTTEV-INPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMS 576
Query: 486 SIYASKGKWDHVSQLRRTMREKGVRKDPGCSWIKYKSRVHIFSADD-WSSPYSDQIYAEL 544
++YAS GKW+ V +++ M++ ++K+P SW++ H F A D +S P S+QI L
Sbjct: 577 NLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENL 636
Query: 545 EKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNL 604
E+L +K GYV D S V D+E + K + L+ HSEKLAIAF ++ G IR++KNL
Sbjct: 637 EELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFA-VWRNVGGSIRILKNL 695
Query: 605 RVCSDCHNATKYISKITQREILVRDAVRFHLFKNGECSCGDFW 647
RVC DCH+ K +S++ +REI+ RD+ RFH F++G CSCGD+W
Sbjct: 696 RVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 201/411 (48%), Gaps = 35/411 (8%)
Query: 44 TFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDEL 103
FS +L R + + I H+LK GF + + GS LVD K G I
Sbjct: 67 NFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEI-SGSKLVDASLKCGDI---------- 115
Query: 104 PEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFR 163
+ +R++F GM ++ ++W ++I L+++ +EA++++R
Sbjct: 116 ---------------------DYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYR 154
Query: 164 EMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAF-IIRNDHKDNVFVGSALVDMYCKC 222
M + D++T SV A L +E ++ H +I NVFVGSALVDMY K
Sbjct: 155 LMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKF 214
Query: 223 KSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVI 282
+ A+ V + K+VV TA++VGY Q G EAVK F +M ++P+++T SV+
Sbjct: 215 GKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVL 274
Query: 283 SSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEV 342
SC NL + G HG + +G S + +L+T Y +C ++DS R+F + ++V
Sbjct: 275 ISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQV 334
Query: 343 SWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYFEIM 402
SWT+L+SG + G+ + F KM+ +KP+ TL L CS + E+GR I+
Sbjct: 335 SWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIV 394
Query: 403 VKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSS 453
K YG + +ID+ + G + A+ + + D I T++ S
Sbjct: 395 TK-YGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLS-EVDVISLNTMIYS 443
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 183/377 (48%), Gaps = 35/377 (9%)
Query: 5 DGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQI 64
D V LI G++ G +AVK + ML + + + T++++LI + + + G+ I
Sbjct: 231 DVVLITALIVGYSQKGEDTEAVKAFQSMLVEKV-QPNEYTYASVLISCGNLKDIGNGKLI 289
Query: 65 HGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLV 124
HG ++K GF S + + L+ MY LR LV
Sbjct: 290 HGLMVKSGFESALASQTSLLTMY-------------------------------LRCSLV 318
Query: 125 EESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTAC 184
++S R+F+ ++ + +SWT++I+GL+QNG E A+ FR+M + + + FT S L C
Sbjct: 319 DDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGC 378
Query: 185 GGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWT 244
L EEG+QIH + + + + GS L+D+Y KC A VF T++ +V+S
Sbjct: 379 SNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLN 438
Query: 245 AMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVT 304
M+ Y QNG EA+ +F M G++P+D T+ SV+ +C N +EEG +
Sbjct: 439 TMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD 498
Query: 305 GLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVRDEVSWTALVSGYAKFGKANETIDLF 364
++ +V G+ G +E++ L E+ D V W L+S K +
Sbjct: 499 KIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVEMAERIT 558
Query: 365 EKMLSHGLKP-DEVTLI 380
K+L ++P DE TLI
Sbjct: 559 RKILE--IEPGDEGTLI 573
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 234/610 (38%), Positives = 353/610 (57%), Gaps = 35/610 (5%)
Query: 40 LSRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRG 99
L++ S +L SSS+ ++IH +L+ GF + + L++ +G + A++
Sbjct: 8 LTKQMLSELLRASSSKP--KQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQV 65
Query: 100 FDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAI 159
FDE+ + I ++NT+ G +R N L E++
Sbjct: 66 FDEMHKPRIFLWNTLFKGYVR-------------------------------NQLPFESL 94
Query: 160 DLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMY 219
L+++MR G+ D+FT+ V+ A L G +HA +++ V + LV MY
Sbjct: 95 LLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMY 154
Query: 220 CKCKSIKYAESVFRTMAWKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLG 279
K + AE +F +M K++V+W A L Q G S A++ F M + ++ D FT+
Sbjct: 155 MKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVV 214
Query: 280 SVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMNVR 339
S++S+C L SLE G + + R+ + I V NA + + KCGN E + LF EM R
Sbjct: 215 SMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQR 274
Query: 340 DEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGRHYF 399
+ VSW+ ++ GYA G + E + LF M + GL+P+ VT +GVLSACS AGLV +G+ YF
Sbjct: 275 NVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYF 334
Query: 400 EIMVK--EYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDAIGWATLLSSCRIH 457
+MV+ + + P +HY CM+D+L R+G LEEA FI KMP PD W LL +C +H
Sbjct: 335 SLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVH 394
Query: 458 GNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVRKDPGCSW 517
++ +G+ A+ L+E P + +VLLS+IYA+ GKWD V ++R MR+ G +K S
Sbjct: 395 RDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSS 454
Query: 518 IKYKSRVHIFSADDWSSPYSDQIYAELEKLNRKMIKEGYVPDMSSVLHDVELSEKIKMLN 577
++++ ++H F+ D S P S IY +L+++ +K+ K GYVPD SV HDVE+ EK L+
Sbjct: 455 VEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLS 514
Query: 578 HHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITQREILVRDAVRFHLFK 637
HHSEKLAIAFGL+ PG PIRV+KNLR C DCH +K++S +T EI++RD RFH F+
Sbjct: 515 HHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFR 574
Query: 638 NGECSCGDFW 647
NG CSC +FW
Sbjct: 575 NGVCSCKEFW 584
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 162/357 (45%), Gaps = 54/357 (15%)
Query: 9 WNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITFSTMLIMSSSRRCVDLGRQIHGHI 68
WN L G+ + +++ +Y M G+ T+ ++ S G +H H+
Sbjct: 77 WNTLFKGYVRNQLPFESLLLYKKMRDLGV-RPDEFTYPFVVKAISQLGDFSCGFALHAHV 135
Query: 69 LKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESR 128
+K+GFG V + LV MY K G + A+
Sbjct: 136 VKYGFGCLGIVATELVMMYMKFGELSSAEF------------------------------ 165
Query: 129 RLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLL 188
LF M+ KD ++W + +Q G A++ F +M + + D FT S+L+ACG L
Sbjct: 166 -LFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLG 224
Query: 189 ALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRTMAWKNVVSWTAMLV 248
+LE G++I+ + + N+ V +A +DM+ KC + + A +F M +NVVSW+ M+V
Sbjct: 225 SLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIV 284
Query: 249 GYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQFHGRSLVTGLIS 308
GY NG S EA+ +F MQ G+ P+ T V+S+C++ + EG ++ S
Sbjct: 285 GYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRY---------FS 335
Query: 309 FITVSN------------ALVTFYGKCGNIEDSHRLFNEMNVRDEVS-WTALVSGYA 352
+ SN +V G+ G +E+++ +M V + W AL+ A
Sbjct: 336 LMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACA 392
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 240,721,507
Number of Sequences: 539616
Number of extensions: 9975171
Number of successful extensions: 32906
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 379
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 23760
Number of HSP's gapped (non-prelim): 2415
length of query: 647
length of database: 191,569,459
effective HSP length: 124
effective length of query: 523
effective length of database: 124,657,075
effective search space: 65195650225
effective search space used: 65195650225
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)