Query 006391
Match_columns 647
No_of_seqs 335 out of 625
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 23:48:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006391.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006391hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fo5_A Thioesterase, adipose a 100.0 2.1E-39 7.1E-44 332.8 14.0 208 84-313 37-248 (258)
2 3p0l_A Steroidogenic acute reg 100.0 7.3E-35 2.5E-39 290.4 20.4 188 110-313 27-216 (221)
3 2r55_A STAR-related lipid tran 100.0 4.2E-34 1.4E-38 286.2 23.9 187 112-312 41-229 (231)
4 2pso_A STAR-related lipid tran 100.0 2.6E-34 8.8E-39 291.1 21.9 183 113-316 49-232 (237)
5 1jss_A Stard4, cholesterol-reg 100.0 2.6E-34 9E-39 287.4 20.1 182 113-311 42-223 (224)
6 1em2_A MLN64 protein; beta bar 100.0 6.6E-34 2.3E-38 284.7 20.3 189 109-313 37-227 (229)
7 3qsz_A STAR-related lipid tran 100.0 9.4E-30 3.2E-34 246.6 22.2 177 113-311 2-179 (189)
8 1ln1_A PC-TP, phosphatidylchol 100.0 6.5E-29 2.2E-33 244.7 20.6 180 112-312 26-210 (214)
9 2e3n_A Lipid-transfer protein 100.0 4.6E-29 1.6E-33 253.7 19.0 194 109-312 42-247 (255)
10 3tl1_A WHIE ORF VI, polyketide 96.8 0.025 8.5E-07 53.3 14.9 143 142-312 5-147 (159)
11 1t17_A Conserved hypothetical 96.6 0.033 1.1E-06 50.6 13.6 113 141-280 3-118 (148)
12 2d4r_A Hypothetical protein TT 96.6 0.097 3.3E-06 45.7 16.2 140 141-311 3-144 (147)
13 3tvq_A Multifunctional cyclase 96.6 0.032 1.1E-06 53.1 13.8 143 142-312 5-147 (169)
14 3tfz_A Cyclase; helix-GRIP, BE 96.4 0.069 2.4E-06 50.2 14.4 147 140-311 5-159 (172)
15 2pcs_A Conserved protein; stru 95.7 0.17 5.8E-06 46.3 13.6 143 142-312 5-149 (162)
16 3ggn_A Uncharacterized protein 95.7 0.18 6.2E-06 46.4 13.7 144 140-314 4-149 (155)
17 3p9v_A Uncharacterized protein 95.5 0.28 9.6E-06 45.6 14.4 112 142-280 9-122 (161)
18 2ns9_A Hypothetical protein AP 95.0 0.83 2.9E-05 41.0 15.6 139 142-310 15-155 (157)
19 3f08_A Uncharacterized protein 94.8 0.51 1.7E-05 43.4 13.8 136 142-312 4-139 (146)
20 2le1_A Uncharacterized protein 92.3 1.4 4.9E-05 39.7 11.9 140 142-314 4-146 (151)
21 3ijt_A SMU.440, putative uncha 91.4 3.3 0.00011 38.4 13.5 36 141-178 19-54 (155)
22 3p51_A Uncharacterized protein 89.0 9.4 0.00032 35.5 14.5 138 142-312 4-143 (160)
23 2d9x_A Oxysterol binding prote 86.5 0.8 2.7E-05 40.0 5.1 32 10-41 79-110 (120)
24 3qwm_A Iqsec1, IQ motif and SE 85.6 0.69 2.4E-05 43.0 4.4 38 1-38 85-125 (140)
25 2qpv_A Uncharacterized protein 84.4 13 0.00045 34.5 12.7 35 141-177 28-62 (156)
26 1fao_A Dual adaptor of phospho 82.4 0.79 2.7E-05 40.0 3.2 32 10-41 87-118 (126)
27 1e09_A PRU AV 1; allergen, maj 81.2 22 0.00076 32.8 12.9 149 142-314 5-156 (159)
28 2da0_A 130-kDa phosphatidylino 80.8 1.1 3.7E-05 38.8 3.4 29 9-37 75-103 (114)
29 1tw0_A Pathogenesis-related cl 80.3 36 0.0012 31.3 14.2 150 142-314 5-155 (157)
30 1u5d_A SKAP55, SRC kinase-asso 80.1 1.6 5.4E-05 36.5 4.2 26 11-36 81-106 (108)
31 1v89_A Hypothetical protein KI 79.0 1.8 6.2E-05 36.8 4.3 27 9-35 86-112 (118)
32 1unq_A RAC-alpha serine/threon 78.2 1.4 4.8E-05 38.4 3.4 28 10-37 85-112 (125)
33 2dn6_A KIAA0640 protein; PH do 77.6 2.3 7.7E-05 36.2 4.5 28 10-37 78-105 (115)
34 2cod_A Centaurin-delta 1; ARF 75.1 2.3 8E-05 36.4 3.9 27 9-35 73-99 (115)
35 3kl1_A PYL2, putative uncharac 74.4 40 0.0014 32.4 12.8 116 146-280 41-158 (190)
36 1dyn_A Dynamin; signal transdu 74.2 2.1 7.1E-05 39.1 3.3 33 1-33 78-115 (125)
37 2dhk_A TBC1 domain family memb 74.2 2.8 9.5E-05 36.5 4.2 27 10-36 79-105 (119)
38 1eaz_A Tandem PH domain contai 74.0 2.7 9.1E-05 36.3 4.0 28 9-36 85-112 (125)
39 2qim_A PR10.2B; trans-zeatin, 73.9 52 0.0018 30.2 13.1 150 141-314 5-156 (158)
40 1pls_A Pleckstrin homology dom 73.9 2.7 9.2E-05 35.8 3.9 27 10-36 76-102 (113)
41 3rt2_A Abscisic acid receptor 73.7 47 0.0016 31.8 13.0 139 145-311 32-176 (183)
42 1wg7_A Dedicator of cytokinesi 71.1 4.5 0.00015 36.4 4.9 25 11-35 100-124 (150)
43 1wgq_A FYVE, rhogef and PH dom 68.2 3.3 0.00011 35.0 3.2 25 11-35 79-103 (109)
44 1icx_A Protein LLR18A, LLPR10. 67.8 42 0.0014 30.7 10.9 149 142-314 5-154 (155)
45 1upq_A PEPP1; PH domain, phosp 67.6 5 0.00017 34.5 4.3 26 10-35 84-109 (123)
46 2cof_A Protein KIAA1914; PH do 66.0 3 0.0001 35.4 2.5 26 10-35 76-101 (107)
47 2coc_A FYVE, rhogef and PH dom 65.6 3.6 0.00012 36.3 2.9 25 11-35 82-106 (112)
48 2rsg_A Collagen type IV alpha- 65.3 1.8 6.1E-05 35.8 0.8 24 10-33 69-92 (94)
49 2d9v_A Pleckstrin homology dom 65.1 4.8 0.00016 35.6 3.7 25 11-35 90-114 (130)
50 2dkp_A Pleckstrin homology dom 62.8 5.4 0.00019 34.5 3.6 26 10-35 94-119 (128)
51 1v5u_A SBF1, SET binding facto 61.6 3.2 0.00011 35.4 1.8 26 10-35 86-111 (117)
52 2d9y_A Pleckstrin homology dom 61.5 4.2 0.00014 34.6 2.6 27 9-35 83-109 (117)
53 2dtc_A RAL guanine nucleotide 60.9 6.2 0.00021 35.8 3.7 34 1-35 79-112 (126)
54 3rcp_A Pleckstrin homology dom 60.2 3.5 0.00012 34.5 1.8 26 10-35 68-93 (103)
55 1x05_A Pleckstrin; PH domain, 59.1 6.9 0.00024 34.0 3.6 24 12-35 97-120 (129)
56 2j59_M RHO-GTPase activating p 58.6 5.4 0.00019 36.7 2.9 25 11-35 87-111 (168)
57 2lul_A Tyrosine-protein kinase 57.5 7.2 0.00025 36.3 3.6 26 10-35 96-121 (164)
58 1u5f_A SRC-associated adaptor 55.4 6.9 0.00024 35.1 3.0 25 11-35 95-119 (148)
59 1wjm_A Beta-spectrin III; PH d 54.4 9.8 0.00034 32.9 3.8 25 11-35 93-117 (123)
60 3cxb_B Pleckstrin homology dom 54.4 9.7 0.00033 32.9 3.7 25 11-35 77-101 (112)
61 3jrs_A PYL1, putative uncharac 52.6 56 0.0019 32.0 9.2 139 146-312 60-205 (208)
62 2flh_A Cytokinin-specific bind 50.9 1.5E+02 0.005 27.1 15.5 145 141-312 4-153 (155)
63 1x1f_A Signal-transducing adap 49.3 14 0.00047 34.2 4.0 26 10-35 88-113 (149)
64 3k3k_A Abscisic acid receptor 48.9 1.3E+02 0.0045 29.4 11.2 107 146-280 56-172 (211)
65 2i9y_A Major latex protein-lik 47.9 1E+02 0.0036 28.5 10.0 144 141-312 18-165 (166)
66 3oqu_A Abscisic acid receptor 45.2 2.3E+02 0.0077 27.6 13.9 137 147-311 59-200 (205)
67 4a8u_A Major pollen allergen B 45.1 1.9E+02 0.0064 26.6 12.8 120 142-280 5-126 (159)
68 3tfm_A Myosin X; split PH doma 42.7 17 0.00057 35.6 3.7 27 9-35 129-155 (228)
69 1btk_A Bruton'S tyrosine kinas 41.3 19 0.00064 33.7 3.7 25 11-35 108-132 (169)
70 3rws_A MTN13 protein; zeatin, 40.1 2.3E+02 0.008 26.4 11.4 150 141-314 10-162 (168)
71 1wi1_A Calcium-dependent activ 39.3 16 0.00056 33.1 2.8 28 9-36 84-111 (126)
72 3a8p_A T-lymphoma invasion and 37.1 26 0.0009 35.2 4.2 28 10-37 99-126 (263)
73 1kz7_A Guanine nucleotide exch 36.8 30 0.001 35.9 4.7 33 10-42 300-332 (353)
74 3q6a_A Uncharacterized protein 35.9 32 0.0011 30.0 4.1 29 142-172 3-31 (135)
75 3qrz_A Abscisic acid receptor 35.3 25 0.00086 34.9 3.6 112 146-280 84-197 (223)
76 2dfk_A Collybistin II; DH doma 32.6 41 0.0014 35.5 5.0 38 2-40 331-368 (402)
77 2rgn_B RHOA/RAC/CDC42 exchange 30.8 33 0.0011 35.6 3.8 28 10-37 293-320 (354)
78 2pz1_A RHO guanine nucleotide 30.8 37 0.0013 36.5 4.4 35 2-37 408-442 (466)
79 1qqg_A IRS-1, insulin receptor 30.6 26 0.00088 35.3 2.9 26 10-35 87-112 (264)
80 2vjg_A Major allergen DAU C 1; 28.8 3.1E+02 0.011 25.0 9.8 120 141-280 5-126 (154)
81 2leq_A Uncharacterized protein 27.8 31 0.0011 29.8 2.6 30 140-171 5-34 (146)
82 2vrw_B P95VAV, VAV1, proto-onc 26.6 48 0.0016 34.8 4.3 28 10-37 310-337 (406)
83 3pu2_A Uncharacterized protein 26.6 60 0.002 29.6 4.4 31 140-172 13-43 (164)
84 2l8o_A Uncharacterized protein 25.4 24 0.00081 31.5 1.4 28 141-170 3-30 (144)
85 2lgh_A Uncharacterized protein 22.0 42 0.0015 29.8 2.4 27 142-170 3-29 (144)
86 1zc3_B Exocyst complex protein 21.0 74 0.0025 27.8 3.7 24 12-35 84-107 (113)
87 1mai_A Phospholipase C delta-1 20.3 69 0.0024 28.4 3.4 27 10-36 96-122 (131)
88 3ky9_A Proto-oncogene VAV; cal 20.2 67 0.0023 35.7 4.0 28 10-37 482-509 (587)
No 1
>3fo5_A Thioesterase, adipose associated, isoform BFIT2; orthogonal bundle, consortium, lipid transport; HET: 1PE TCE; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=332.84 Aligned_cols=208 Identities=16% Similarity=0.192 Sum_probs=177.2
Q ss_pred CCcccCCCCCCCCccCCCcCCCc--ccccccCCCCEEEEEeCCeEEEEEecCCCCCcccEEEEEEeecCCHHHHHHHHHc
Q 006391 84 ETLLRQSSDLGGSVRGEGFFEGD--IGDAIEAHEWKCVRTLNGVRIFEDVADSKSGRGVLVKAVGVIDASADTVFEVVLN 161 (647)
Q Consensus 84 ~~~~~~w~~~~~~~~~~ls~~n~--~~~~~a~sgW~l~~~kngVrVf~~~~~~~~~~~~~~Ka~~vVdaspe~Vfe~L~d 161 (647)
..+|++||++||+ ||||+|+ .+++++++||++..+++||+||+++.. ..+.+|++++|++||++||++|+|
T Consensus 37 ~p~~~~w~~~~~~---~l~~~n~~al~~l~~~~gW~~~~~~~gv~Vy~~~~~----~~l~~k~~~~v~~~~~~v~~~L~D 109 (258)
T 3fo5_A 37 VPLSVPWDPSNQV---YLSYNNVSSLKMLVAKDNWVLSSEISQVRLYTLEDD----KFLSFHMEMVVHVDAAQAFLLLSD 109 (258)
T ss_dssp SCSEEECCGGGHH---HHHHHHHHHHHHHHTCSCCEEEEEETTEEEEEEECS----SCEEEEEEEEESSCHHHHHHHHHC
T ss_pred CCcccccCcccce---ecccCCHHHHHhhhccCCCEEEecCCCeEEEEEECC----CceEEEEEEEEeCCHHHHHHHHhC
Confidence 3489999999999 8999996 699999999999999999999998642 246899999999999999999999
Q ss_pred cCCcccccccCCCCceEEEEeecCceeEEEEEecCCCCCCCCCCCeEEEEEEEEEc-CCC-eEEEEEeeccCCCCCCCCC
Q 006391 162 LERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRG-QDG-TYTILQFPAVHKKRPPKSG 239 (647)
Q Consensus 162 ~~~~~R~~WD~~~~~~evVE~iD~~tDIvY~~~~p~~lp~~vs~RDFV~LRswRr~-~dG-sYvIa~~SV~Hp~~Pp~~G 239 (647)
++. |++||+++.++++||++|++ +++|+...|.. ++++++||||++|+||+. .+| .|+|+.+||.||.+||++|
T Consensus 110 ~~~--R~~WD~~~~~~~vle~id~~-~ivY~~~~p~~-~~~v~~RDFV~lr~~r~~~~~G~~yvi~~~SV~hp~~Pp~~g 185 (258)
T 3fo5_A 110 LRQ--RPEWDKHYRSVELVQQVDED-DAIYHVTSPAL-GGHTKPQDFVILASRRKPCDNGDPYVIALRSVTLPTHRETPE 185 (258)
T ss_dssp GGG--GGGTCTTCCEEEEEEEEETT-EEEEEEEECCC-TTCSSCEEEEEEEEEECCSSTTCCEEEEEEEEECTTSCCCTT
T ss_pred chh--HhHhhhhccEEEEEEEcCCC-eEEEEEecCCc-cCCCCCCEEEEEEEEEeccCCCCEEEEEEEeccCCCCCCCCC
Confidence 876 99999999999999999999 78887766642 267999999999999874 356 5999999999999999999
Q ss_pred eeeEEEcceeEEEEecCCCCCCCCCccEEEEEEEEcCCCccccccCcccceehhhHHHHHHHHHHHHHHhhcCC
Q 006391 240 YRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFALLSQVAGLKEYIGANP 313 (647)
Q Consensus 240 ~VRAei~~sGylI~P~~~~~~~~~~~~~VT~I~qvDlkGw~~w~p~~~~~~~~~~~~~mL~~va~LRe~~~~~~ 313 (647)
||||++++|||+|+|+++ +.|+|||+.|+|+ |.+ |.|...+.+ +...+.+...+|++|+..+.
T Consensus 186 ~VR~~~~~sg~~I~P~~~------~~t~VtY~~q~dp-G~l---P~~~~n~~g-~s~~~~~t~~~~~~fl~~~~ 248 (258)
T 3fo5_A 186 YRRGETLCSGFCLWREGD------QLTKVSYYNQATP-GVL---NYVTTNVAG-LSSEFYTTFKACEQFLLDNR 248 (258)
T ss_dssp SEECCCSSEEEEEEEEET------TEEEEEEEESCCG-GGH---HHHHHHHHT-SCCHHHHHHHHHHHHHHHTC
T ss_pred CEEEEEcCcEEEEEECCC------CCEEEEEEEeeCC-CCC---CceEEeccc-cchHHHHHHHHHHHHHHhcc
Confidence 999999999999999986 6899999999999 557 444433322 22234566778999988653
No 2
>3p0l_A Steroidogenic acute regulatory protein, mitochond; structural genomics consortium, SGC, start domain, cholester transport, cholesterol; 3.40A {Homo sapiens}
Probab=100.00 E-value=7.3e-35 Score=290.40 Aligned_cols=188 Identities=18% Similarity=0.260 Sum_probs=160.9
Q ss_pred cccCCCCEEEE-EeCCeEEEEEecCCCCCcccEEEEEEeecCCHHHHHHHHH-ccCCcccccccCCCCceEEEEeecCce
Q 006391 110 AIEAHEWKCVR-TLNGVRIFEDVADSKSGRGVLVKAVGVIDASADTVFEVVL-NLERHQRYEWDMLTGDLELVDSYDGHY 187 (647)
Q Consensus 110 ~~a~sgW~l~~-~kngVrVf~~~~~~~~~~~~~~Ka~~vVdaspe~Vfe~L~-d~~~~~R~~WD~~~~~~evVE~iD~~t 187 (647)
+.+..||++.. .++|++||++..+. . +.++|++++|++||++||++|+ |.+. |++||+++.++++||++|+++
T Consensus 27 ~~~~~gW~~~~~~~~gv~vy~~~~~~--~-g~~~k~~~~v~~~~~~v~~~l~~d~~~--r~~Wd~~~~~~~vle~~~~~t 101 (221)
T 3p0l_A 27 LSNQEGWKKESQQDNGDKVMSKVVPD--V-GKVFRLEVVVDQPMERLYEELVERMEA--MGEWNPNVKEIKVLQKIGKDT 101 (221)
T ss_dssp HHSCTTCEEEEECTTSCEEEEEECSS--S-CEEEEEEEEESSCHHHHHHHHTTTGGG--TTTSCTTCSEEEEEEECSSSE
T ss_pred HhCCCCCeEeeecCCCcEEEEEEcCC--C-ceEEEEEEEEcCCHHHHHHHHHhccch--hhhcCcchheEEEEEecCCCe
Confidence 33578999995 89999999997532 2 5899999999999999999984 7765 999999999999999999999
Q ss_pred eEEEEEecCCCCCCCCCCCeEEEEEEEEEcCCCeEEEEEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccE
Q 006391 188 DVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCL 267 (647)
Q Consensus 188 DIvY~~~~p~~lp~~vs~RDFV~LRswRr~~dGsYvIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~ 267 (647)
+|+|++.++. +++++++||||++|+|++. +|.|+++.+||+||.+||++|||||+++++||+|+|+++ ++++|+
T Consensus 102 ~I~y~~~~~~-~~~~v~~RDfv~~r~~~~~-~~~~vi~~~Sv~~~~~P~~~g~VR~~~~~~g~~i~p~~~----~~~~t~ 175 (221)
T 3p0l_A 102 FITHELAAEA-AGNLVGPRDFVSVRCAKRR-GSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAG----SPSKTK 175 (221)
T ss_dssp EEEEEEECC----CCSCCEEEEEEEEEEEC-SSCEEECCEECCCTTSCCCTTSEECEECSCEEEEEEETT----EEEEEE
T ss_pred EEEEEeeccc-cCCccCCceEEEEEEEEEc-CCeEEEEEEeccCCCCCCCCCeEEEeccceEEEEEECCC----CCCcEE
Confidence 9999987653 2458999999999999986 578999999999999999999999999999999999986 345899
Q ss_pred EEEEEEEcCCCccccccCcccceehhhHHHHHHHHHHHHHHhhcCC
Q 006391 268 VTQMLEIHSSGWCRWKKNSSTKFEKTTHFALLSQVAGLKEYIGANP 313 (647)
Q Consensus 268 VT~I~qvDlkGw~~w~p~~~~~~~~~~~~~mL~~va~LRe~~~~~~ 313 (647)
|||++|+|||||+ |.|+ +.+.+...|++++.+||+.++..+
T Consensus 176 vt~~~~~Dp~G~i---P~~l--vn~~~~~~~~~~~~~Lr~~~~~~~ 216 (221)
T 3p0l_A 176 LTWLLSIDLKGWL---PKSI--INQVLSQTQVDFANHLRKRLESHP 216 (221)
T ss_dssp EEEEECEECCSSC---CHHH--HHHHHHHHHHHHHHHHHHHTC---
T ss_pred EEEEEEecCCCCC---CHHH--HHHHHHHHHHHHHHHHHHHHhhch
Confidence 9999999999999 6533 345566778899999999998543
No 3
>2r55_A STAR-related lipid transfer protein 5; alpha and beta protein, cholesterol binding, structural GENO structural genomics consortium, SGC; 2.50A {Homo sapiens}
Probab=100.00 E-value=4.2e-34 Score=286.21 Aligned_cols=187 Identities=21% Similarity=0.218 Sum_probs=161.7
Q ss_pred cCCCCEEEEEeCCeEEEEEecCCCCCcccEEEEEEeecCCHHHHHHHH--HccCCcccccccCCCCceEEEEeecCceeE
Q 006391 112 EAHEWKCVRTLNGVRIFEDVADSKSGRGVLVKAVGVIDASADTVFEVV--LNLERHQRYEWDMLTGDLELVDSYDGHYDV 189 (647)
Q Consensus 112 a~sgW~l~~~kngVrVf~~~~~~~~~~~~~~Ka~~vVdaspe~Vfe~L--~d~~~~~R~~WD~~~~~~evVE~iD~~tDI 189 (647)
+..+|++..+++|++||++... +..+.++|++++|+++|++||++| +|.+. |++||.++.++++|+++|++++|
T Consensus 41 ~~~~W~~~~~~~gv~v~~~~~~--~~~~~~~k~~~~v~~~~~~v~~~l~~~d~~~--r~~Wd~~~~~~~vle~i~~~~~i 116 (231)
T 2r55_A 41 DTAGWKICREGNGVSVSWRPSV--EFPGNLYRGEGIVYGTLEEVWDCVKPAVGGL--RVKWDENVTGFEIIQSITDTLCV 116 (231)
T ss_dssp CCSSCEEEECCSSEEEEEEECS--SSSSEEEEEEEEESSCHHHHHHHHCC--CCS--HHHHCTTCSEEEEEEECSSSEEE
T ss_pred CCCCCEEEEeCCCEEEEEEccC--CCCCcEEEEEEEECCCHHHHHHHHHhhCcch--hhhhccccceeEEEEEcCCCEEE
Confidence 3579999999999999999763 235689999999999999999999 77765 99999999999999999999999
Q ss_pred EEEEecCCCCCCCCCCCeEEEEEEEEEcCCCeEEEEEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccEEE
Q 006391 190 VYGTYDPKYLTRWQSKRDFVFSRQWFRGQDGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVT 269 (647)
Q Consensus 190 vY~~~~p~~lp~~vs~RDFV~LRswRr~~dGsYvIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~VT 269 (647)
+|++..+. +++++++||||++|+|++.++|+|+|+.+||+||.+||.+|||||++.++||+|+|+++ ++++|+||
T Consensus 117 ~~~~~~~~-~~~~v~~RDfv~~r~~~~~~~g~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~----~~~~t~vt 191 (231)
T 2r55_A 117 SRTSTPSA-AMKLISPRDFVDLVLVKRYEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPG----EPTKTNLV 191 (231)
T ss_dssp EEEECCCB-TTTTBCCEEEEEEEEEEECTTSCEEEEEEECCCTTSCCCTTCEEEEECSEEEEEEECC------CCCEEEE
T ss_pred EEEEeccc-cCCccCCCeEEEEEEEEEcCCCEEEEEEEeccCCCCCCCCCCEEEEEEeeEEEEEEeCC----CCCcEEEE
Confidence 88765553 45689999999999999998899999999999999999999999999999999999974 23689999
Q ss_pred EEEEEcCCCccccccCcccceehhhHHHHHHHHHHHHHHhhcC
Q 006391 270 QMLEIHSSGWCRWKKNSSTKFEKTTHFALLSQVAGLKEYIGAN 312 (647)
Q Consensus 270 ~I~qvDlkGw~~w~p~~~~~~~~~~~~~mL~~va~LRe~~~~~ 312 (647)
|+.++|++||+ |.|+ +...+...|+..+++||+.++..
T Consensus 192 ~~~~~Dp~G~i---P~~l--vn~~~~~~~~~~~~~Lr~~~~~~ 229 (231)
T 2r55_A 192 TFFHTDLSGYL---PQNV--VDSFFPRSMTRFYANLQKAVKQF 229 (231)
T ss_dssp EEECEECCSSC---CHHH--HHHHHHHHHHHHHHHHHHHHHGG
T ss_pred EEEEeCCCCCc---cHHH--HHHHHhHhHHHHHHHHHHHHHHh
Confidence 99999999999 5533 23456667889999999998764
No 4
>2pso_A STAR-related lipid transfer protein 13; alpha and beta protein, lipid binding, helix swapping, struc genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens} SCOP: d.129.3.2
Probab=100.00 E-value=2.6e-34 Score=291.13 Aligned_cols=183 Identities=19% Similarity=0.199 Sum_probs=157.8
Q ss_pred CCCCEEEEEeCCeEEEEEecCCCCCcccEEEEEEeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCceeEEEE
Q 006391 113 AHEWKCVRTLNGVRIFEDVADSKSGRGVLVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYG 192 (647)
Q Consensus 113 ~sgW~l~~~kngVrVf~~~~~~~~~~~~~~Ka~~vVdaspe~Vfe~L~d~~~~~R~~WD~~~~~~evVE~iD~~tDIvY~ 192 (647)
..||++..+++|++||++... .++...++|++++|+++++++|..|+. .|++||+++.++++||++|++++|+|+
T Consensus 49 ~~gW~~~~~~~gi~V~~k~~~-~~~~~~~~K~~~~v~~~~~~v~~~ll~----dr~~Wd~~~~~~~vle~id~~~~I~y~ 123 (237)
T 2pso_A 49 FKGWVTCSSTDNTDLAFKKVG-DGNPLKLWKASVEVEAPPSVVLNRVLR----ERHLWDEDFVQWKVVETLDRQTEIYQY 123 (237)
T ss_dssp CCSCEEECCSSSCEEEEECCC-SSCCCCEEEEEEEESSCHHHHHHHHHH----CGGGTCTTBCCCEEEEEEETTEEEEEE
T ss_pred CCCCEEEecCCCeEEEEEEcC-CCCCcEEEEEEEEEcCChHHHHHHHHh----hhhhHHhhhceEEEEEEcCCCcEEEEE
Confidence 689999999999999999642 235667999999999999998765553 289999999999999999999999999
Q ss_pred EecCCCCCCCCCCCeEEEEEEEEEc-CCCeEEEEEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccEEEEE
Q 006391 193 TYDPKYLTRWQSKRDFVFSRQWFRG-QDGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQM 271 (647)
Q Consensus 193 ~~~p~~lp~~vs~RDFV~LRswRr~-~dGsYvIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~VT~I 271 (647)
++++.| ++++||||++|+|+++ ++|+|+|+++||.||++||+ |||||+++++||+|+|+++ ++|+|||+
T Consensus 124 ~~~~p~---p~~~RDfv~~r~~r~~~~~g~~vi~~~Sv~h~~~P~~-g~VR~~~~~~g~~i~P~~~------~~t~vt~~ 193 (237)
T 2pso_A 124 VLNSMA---PHPSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEAQLL-GGVRAVVMDSQYLIEPCGS------GKSRLTHI 193 (237)
T ss_dssp EECCSS---SCCCEEEEEEEEEESCCGGGCEEEEEEECCCTTCCCC-SSEECCEEEEEEEEEECST------TCEEEEEE
T ss_pred EecCCC---CcCCeEEEEEEEEEEECCCCEEEEEEEcccCCCCCCC-CcEEEEEeccEEEEEECCC------CCEEEEEE
Confidence 998654 7999999999999974 67999999999999999999 9999999999999999965 67999999
Q ss_pred EEEcCCCccccccCcccceehhhHHHHHHHHHHHHHHhhcCCCCC
Q 006391 272 LEIHSSGWCRWKKNSSTKFEKTTHFALLSQVAGLKEYIGANPALK 316 (647)
Q Consensus 272 ~qvDlkGw~~w~p~~~~~~~~~~~~~mL~~va~LRe~~~~~~~~~ 316 (647)
+++||+||+ |.|++.+.... +..++.+||+.|++.....
T Consensus 194 ~~~Dp~G~i---P~~ln~~~~~~---~~~~l~~LR~~~~~~~~~~ 232 (237)
T 2pso_A 194 CRIDLKGHS---PEWYSKGFGHL---CAAEVARIRNSFQPLIAEG 232 (237)
T ss_dssp EEECCSSSC---TTTTTTHHHHH---HHHHHHHHHHTTSCC----
T ss_pred EEeCCCCCc---hHHHHHHHHHH---HHHHHHHHHHHHHhhcCCC
Confidence 999999999 88775544444 4568999999999875533
No 5
>1jss_A Stard4, cholesterol-regulated start protein 4; start domain, structural genomics, PSI, protein structure initiative; 2.20A {Mus musculus} SCOP: d.129.3.2
Probab=100.00 E-value=2.6e-34 Score=287.43 Aligned_cols=182 Identities=18% Similarity=0.275 Sum_probs=159.5
Q ss_pred CCCCEEEEEeCCeEEEEEecCCCCCcccEEEEEEeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCceeEEEE
Q 006391 113 AHEWKCVRTLNGVRIFEDVADSKSGRGVLVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYG 192 (647)
Q Consensus 113 ~sgW~l~~~kngVrVf~~~~~~~~~~~~~~Ka~~vVdaspe~Vfe~L~d~~~~~R~~WD~~~~~~evVE~iD~~tDIvY~ 192 (647)
..||++..+++||+||++... +..+.++|++++|++||++||++|+|... |++||+++.++++||++|++++|+|+
T Consensus 42 ~~~W~~~~~~~gv~vy~~~~~--~~~~~~~k~~~~v~~~~~~v~~~l~d~~~--r~~Wd~~~~~~~vle~id~~~~I~y~ 117 (224)
T 1jss_A 42 EDEWRVAKKAKDVTVWRKPSE--EFNGYLYKAQGVMDDVVNNVIDHIRPGPW--RLDWDRLMTSLDVLEHFEENCCVMRY 117 (224)
T ss_dssp GGGCEEEEEETTEEEEEEECS--SSSSEEEEEEEEESSCHHHHHHHHSSSTT--HHHHCSSEEEEEEEEECSTTEEEEEE
T ss_pred CCCCEEEEECCCEEEEEEecc--CCCceEEEEEEEEeCCHHHHHHHHhCccc--ccccccceeeEEEEEEcCCCeEEEEE
Confidence 679999999999999999543 24568999999999999999999999876 99999999999999999999999999
Q ss_pred EecCCCCCCCCCCCeEEEEEEEEEcCCCeEEEEEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccEEEEEE
Q 006391 193 TYDPKYLTRWQSKRDFVFSRQWFRGQDGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQML 272 (647)
Q Consensus 193 ~~~p~~lp~~vs~RDFV~LRswRr~~dGsYvIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~VT~I~ 272 (647)
++++.+ ++++++||||++|+|++.+|| |+++++||+||.+| +|||||+++++||+|+|+++ ++++|+|||++
T Consensus 118 ~~~~~~-~~~v~~RDfv~~r~~~~~~~~-~vi~~~Sv~hp~~~--~g~VR~~~~~~g~~i~p~~~----~~~~t~vt~~~ 189 (224)
T 1jss_A 118 TTAGQL-LNIISPREFVDFSYTVGYEEG-LLSCGVSVEWSETR--PEFVRGYNHPCGWFCVPLKD----SPSQSLLTGYI 189 (224)
T ss_dssp EECCBT-TTTBCCEEEEEEEEEEEETTE-EEEEEEECCCCCCC--TTSEECEECSEEEEEEEETT----EEEEEEEEEEE
T ss_pred Eccccc-CCCCCCCeEEEEEEEEEcCCe-EEEEEeeeecCCCC--CCCEEEEecccEEEEEEcCC----CCCceEEEEEE
Confidence 998754 345999999999999998776 88899999999995 49999999999999999975 34689999999
Q ss_pred EEcCCCccccccCcccceehhhHHHHHHHHHHHHHHhhc
Q 006391 273 EIHSSGWCRWKKNSSTKFEKTTHFALLSQVAGLKEYIGA 311 (647)
Q Consensus 273 qvDlkGw~~w~p~~~~~~~~~~~~~mL~~va~LRe~~~~ 311 (647)
++|||||+ |.|. +.+.+...|+.++.+||+.++.
T Consensus 190 ~~Dp~G~i---P~~l--vn~~~~~~~~~~~~~Lr~~~~~ 223 (224)
T 1jss_A 190 QTDLRGMI---PQSA--VDTAMASTLANFYSDLRKGLRK 223 (224)
T ss_dssp CEECCSCC---CHHH--HHHHHHHHHHHHHHHHHHHTC-
T ss_pred EeCCCCCc---cHHH--HHHHHHHhHHHHHHHHHHHHhh
Confidence 99999999 6533 3455677788999999998864
No 6
>1em2_A MLN64 protein; beta barrel, lipid binding protein; HET: TAR; 2.20A {Homo sapiens} SCOP: d.129.3.2
Probab=100.00 E-value=6.6e-34 Score=284.68 Aligned_cols=189 Identities=17% Similarity=0.224 Sum_probs=161.9
Q ss_pred ccccCCCCEEEEEe-CCeEEEEEecCCCCCcccEEEEEEeecCCHHHHH-HHHHccCCcccccccCCCCceEEEEeecCc
Q 006391 109 DAIEAHEWKCVRTL-NGVRIFEDVADSKSGRGVLVKAVGVIDASADTVF-EVVLNLERHQRYEWDMLTGDLELVDSYDGH 186 (647)
Q Consensus 109 ~~~a~sgW~l~~~k-ngVrVf~~~~~~~~~~~~~~Ka~~vVdaspe~Vf-e~L~d~~~~~R~~WD~~~~~~evVE~iD~~ 186 (647)
.+.+..||++.... ||++||++..+ ..+.++|++++|+++|++|| +++.|.+. |++||+++.++++|+++|++
T Consensus 37 ~l~~~~~W~~~~~~~~g~~vy~~~~~---~~g~~~k~~~~v~~~~~~v~~~~~~d~~~--r~~Wd~~~~~~~vle~~~~~ 111 (229)
T 1em2_A 37 ILAQEENWKFEKNNEYGDTVYTIEVP---FHGKTFILKTFLPCPAELVYQEVILQPER--MVLWNKTVTACQILQRVEDN 111 (229)
T ss_dssp HHTTGGGCEEEEECTTCCEEEEEEET---TTEEEEEEEEEESSCHHHHHHHTTTCHHH--HTTTCTTEEEEEEEEEETTT
T ss_pred HhhCCCCCEEEEecCCCCEEEEEecC---CCCceEEEEEEecCCHHHHHHHHHhCccc--hhhcccccceEEEEEecCCC
Confidence 34446799999997 89999999664 23468999999999999999 77777765 99999999999999999999
Q ss_pred eeEEEEEecCCCCCCCCCCCeEEEEEEEEEcCCCeEEEEEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCcc
Q 006391 187 YDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKC 266 (647)
Q Consensus 187 tDIvY~~~~p~~lp~~vs~RDFV~LRswRr~~dGsYvIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~ 266 (647)
++|+|++.+|. +++++++||||++|+|++.+ +.|+|+.+||.||.+||++|||||+++++||+|+|+++ ++++|
T Consensus 112 t~I~~~~~~p~-~~~~~~~RDfv~~r~~~~~~-~~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~----~~~~t 185 (229)
T 1em2_A 112 TLISYDVSAGA-AGGVVSPRDFVNVRRIERRR-DRYLSSGIATSHSAKPPTHKYVRGENGPGGMIVLKSAS----NPRVC 185 (229)
T ss_dssp EEEEEEEECCB-TTTTBCCEEEEEEEEEEECS-SEEEEEEEECCCTTSCCCTTSEECEECSEEEEEEECSS----CTTCE
T ss_pred eEEEEEEecCc-CCCCcCCCeeEEEEEEEEcC-CEEEEEEecccCCCCCCCCCCEeeeecccEEEEEecCC----CCCcE
Confidence 99988877663 23579999999999999974 56999999999999999999999999999999999975 34689
Q ss_pred EEEEEEEEcCCCccccccCcccceehhhHHHHHHHHHHHHHHhhcCC
Q 006391 267 LVTQMLEIHSSGWCRWKKNSSTKFEKTTHFALLSQVAGLKEYIGANP 313 (647)
Q Consensus 267 ~VT~I~qvDlkGw~~w~p~~~~~~~~~~~~~mL~~va~LRe~~~~~~ 313 (647)
+|||++++|++||+ |.|. +...+...|+.++.+||++++...
T Consensus 186 ~vt~~~~~Dp~G~i---P~~l--~n~~~~~~~~~~~~~Lr~~~~~~~ 227 (229)
T 1em2_A 186 TFVWILNTDLKGRL---PRYL--IHQSLAATMFEFAFHLRQRISELG 227 (229)
T ss_dssp EEEEEECEECCSSS---CHHH--HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEEEEECCCCCC---CHHH--HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999 6543 334556678899999999998753
No 7
>3qsz_A STAR-related lipid transfer protein; structural genomics, PSI-biology; 2.39A {Xanthomonas axonopodis PV}
Probab=99.97 E-value=9.4e-30 Score=246.64 Aligned_cols=177 Identities=15% Similarity=0.176 Sum_probs=153.2
Q ss_pred CCCCEEEEEeCCeEEEEEecCCCCCcccEEEEEEeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCceeEEEE
Q 006391 113 AHEWKCVRTLNGVRIFEDVADSKSGRGVLVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYG 192 (647)
Q Consensus 113 ~sgW~l~~~kngVrVf~~~~~~~~~~~~~~Ka~~vVdaspe~Vfe~L~d~~~~~R~~WD~~~~~~evVE~iD~~tDIvY~ 192 (647)
++||++..+++|++||++..+ +.....+|++++|++||+++|++|.|.+. |++||+.+.++++|++ +++++|+|+
T Consensus 2 ~~~W~~~~~~~gv~v~~~~~~--~~~~~~~k~~~~v~~s~~~v~~~l~D~~~--~~~W~~~~~~~~vle~-~~~~~i~y~ 76 (189)
T 3qsz_A 2 QDGWSLAKDAEGIKVYVRNVE--GSPLREFRGEVRLKAAADDVVKVLRDANA--FRQWMPDVAASELLKA-TDTEQYHYL 76 (189)
T ss_dssp -CCCEEEEEETTEEEEEECCT--TCSSCEEEEEEEESSCHHHHHHHHHCGGG--GGGTSTTEEEEEEEEE-CSSEEEEEE
T ss_pred CCCCEEEEcCCCEEEEEEeCC--CCCeEEEEEEEEEECCHHHHHHHHHhHHH--hhhHHHhcCEEEEEee-cCCceEEEE
Confidence 579999999999999999754 23457899999999999999999999986 9999999999999999 999999999
Q ss_pred EecCCCCCCCCCCCeEEEEEEEEEcCCCeEEEEEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccEEEEEE
Q 006391 193 TYDPKYLTRWQSKRDFVFSRQWFRGQDGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQML 272 (647)
Q Consensus 193 ~~~p~~lp~~vs~RDFV~LRswRr~~dGsYvIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~VT~I~ 272 (647)
.++.. +++++||||++|+|++..+|+|+|...| .||.+||++||||+.+..|||+|+| ++ ++|+|||++
T Consensus 77 ~~~~p---~p~~~RD~v~~~~~~~~~~g~~~i~~~~-~~~~~P~~~~~VR~~~~~~~~~i~p-~~------~~t~vt~~~ 145 (189)
T 3qsz_A 77 DNSAP---WPVSNRDGVYHFTYEKAGDGAITVRVEA-VPDYLPLRKGKVRIPRAKGQWTLVP-DA------DGVDVTYQM 145 (189)
T ss_dssp EECCS---SSCCCEEEEEEEEEEECTTSCEEEEEEE-CTTSSCCCTTSEECCCEEEEEEEEE-CS------SSEEEEEEE
T ss_pred EeecC---CCcCCcceEEEEEEEECCCCeEEEEEEc-CCCccCCCCCeEEeeEeeEEEEEEE-CC------CeEEEEEEE
Confidence 98854 4799999999999999877888887776 7999999999999999999999999 54 579999999
Q ss_pred EEcCCCccccccCcc-cceehhhHHHHHHHHHHHHHHhhc
Q 006391 273 EIHSSGWCRWKKNSS-TKFEKTTHFALLSQVAGLKEYIGA 311 (647)
Q Consensus 273 qvDlkGw~~w~p~~~-~~~~~~~~~~mL~~va~LRe~~~~ 311 (647)
++|++||+ |.|+ +.+.+ ..+...+.+||+.++.
T Consensus 146 ~~dp~G~i---P~~lvn~~~~---~~~~~~l~~L~k~~~~ 179 (189)
T 3qsz_A 146 HASPGGSI---PSWLANQTVV---ETPFGTLKALRSHLRQ 179 (189)
T ss_dssp EECSCSSS---CHHHHHHTTT---HHHHHHHHHHHHHHTC
T ss_pred EeCCCCCC---CHHHHHHHHH---HHHHHHHHHHHHHhhh
Confidence 99999999 5533 23333 3455688899988864
No 8
>1ln1_A PC-TP, phosphatidylcholine transfer protein; start domain, lipid binding protein; HET: DLP; 2.40A {Homo sapiens} SCOP: d.129.3.2 PDB: 1ln2_A* 1ln3_A*
Probab=99.96 E-value=6.5e-29 Score=244.68 Aligned_cols=180 Identities=18% Similarity=0.187 Sum_probs=151.8
Q ss_pred cCCCCEEEEEeCCeEEEEEecCCCCCcccEEEEEEeec-CCHHHHHHHHHccCCcccccccCCCCceEEEEeecCceeEE
Q 006391 112 EAHEWKCVRTLNGVRIFEDVADSKSGRGVLVKAVGVID-ASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVV 190 (647)
Q Consensus 112 a~sgW~l~~~kngVrVf~~~~~~~~~~~~~~Ka~~vVd-aspe~Vfe~L~d~~~~~R~~WD~~~~~~evVE~iD~~tDIv 190 (647)
+..+|+++.+++|++||++..+ +...+.+|++++|+ ++|++||++|+|.+. |++||+++.++++|+. ++ ++|+
T Consensus 26 ~~~~W~~~~~~~~v~v~~~~~~--~~~~~~~k~~~~i~~~~~~~v~~~l~d~~~--r~~Wd~~~~~~~vle~-~~-~~i~ 99 (214)
T 1ln1_A 26 AGADWQLLVETSGISIYRLLDK--KTGLYEYKVFGVLEDCSPTLLADIYMDSDY--RKQWDQYVKELYEQEC-NG-ETVV 99 (214)
T ss_dssp TTTTCEEEEEETTEEEEEEEET--TTTEEEEEEEEEETTSCHHHHHHHHHCHHH--HHHHCTTEEEEEEEEE-TT-EEEE
T ss_pred CCCCcEEEEECCCeEEEEeccC--CCCcEEEEEEEEECCCCHHHHHHHHcCHHH--HHHHHHHHhhEEEecc-CC-CEEE
Confidence 4679999999999999999653 24457899999995 999999999999865 9999999999999998 55 7899
Q ss_pred EEEecCCCCCCCCCCCeEEEEEEEEEc-CCC--eEEEEEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccE
Q 006391 191 YGTYDPKYLTRWQSKRDFVFSRQWFRG-QDG--TYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCL 267 (647)
Q Consensus 191 Y~~~~p~~lp~~vs~RDFV~LRswRr~-~dG--sYvIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~ 267 (647)
|++++.. +++++||||++|+|++. ++| .|+++.+||.||++|+++|||||++..+||+|+|+++ ++|+
T Consensus 100 ~~~~~~p---~p~~~RD~v~~~~~~~~~~~g~~~~~i~~~Sv~~p~~P~~~~~VR~~~~~~~~~i~p~~~------~~t~ 170 (214)
T 1ln1_A 100 YWEVKYP---FPMSNRDYVYLRQRRDLDMEGRKIHVILARSTSMPQLGERSGVIRVKQYKQSLAIESDGK------KGSK 170 (214)
T ss_dssp EEEECCC---TTSCCEEEEEEEEEEEECSTTCCEEEEEEEECCBTTBCCCTTSEEECCEEEEEEEEECSS------SSEE
T ss_pred EEEEEcC---CCCCCceEEEEEEEEecccCCCeEEEEEEecccCCCCCCCCCcEEEEEEEEEEEEecCCC------CceE
Confidence 9999854 46899999999999875 366 4789999999999999999999999999999999864 5799
Q ss_pred EEEEEEEcCCCccccccCcc-cceehhhHHHHHHHHHHHHHHhhcC
Q 006391 268 VTQMLEIHSSGWCRWKKNSS-TKFEKTTHFALLSQVAGLKEYIGAN 312 (647)
Q Consensus 268 VT~I~qvDlkGw~~w~p~~~-~~~~~~~~~~mL~~va~LRe~~~~~ 312 (647)
|||+.++|++||+ |.|+ +.+.+.. +...+.+||+.+..-
T Consensus 171 v~~~~~~Dp~G~i---P~~l~n~~~~~~---~~~~l~~l~k~~~~y 210 (214)
T 1ln1_A 171 VFMYYFDNPGGQI---PSWLINWAAKNG---VPNFLKDMARACQNY 210 (214)
T ss_dssp EEEEEEECCSSCC---CHHHHHHHHHTH---HHHHHHHHHHHHHTC
T ss_pred EEEEEEECCCCcc---cHHHHHHHHHHH---hHHHHHHHHHHHHhc
Confidence 9999999999999 5543 3333333 445778888877643
No 9
>2e3n_A Lipid-transfer protein CERT; ceramide transfer, lipid transport; HET: 6CM; 1.40A {Homo sapiens} PDB: 2e3m_A* 2e3o_A* 2e3p_A* 2e3q_A* 2e3r_A* 2e3s_A 2z9y_A* 3h3q_A* 3h3r_A* 3h3s_A* 3h3t_A* 2z9z_A*
Probab=99.96 E-value=4.6e-29 Score=253.67 Aligned_cols=194 Identities=14% Similarity=0.242 Sum_probs=153.3
Q ss_pred ccccCCCCEEEEEeCCeEEEEEecCCCCCcccEEEEEEeec-CCHHHHHHHHHccCCcccccccCCCCceEEEEeecCce
Q 006391 109 DAIEAHEWKCVRTLNGVRIFEDVADSKSGRGVLVKAVGVID-ASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHY 187 (647)
Q Consensus 109 ~~~a~sgW~l~~~kngVrVf~~~~~~~~~~~~~~Ka~~vVd-aspe~Vfe~L~d~~~~~R~~WD~~~~~~evVE~iD~~t 187 (647)
.+.+..+|+++.+++|++||++..+..+.....+|+++++. ++|++||++|+|.+. |++||+++.++++||++|+++
T Consensus 42 ~~~~~~~W~~~~~~~gv~vy~~~~~~~g~~~~~~K~~~~~~~~~~~~v~~~l~d~~~--r~~Wd~~~~~~~vle~i~~~~ 119 (255)
T 2e3n_A 42 DVGGDANWQLVVEEGEMKVYRREVEENGIVLDPLKATHAVKGVTGHEVCNYFWNVDV--RNDWETTIENFHVVETLADNA 119 (255)
T ss_dssp CCTTCTTEEEEEEETTEEEEEECCEETTEECCCEEEEEEEETCCHHHHHHHHHCGGG--HHHHCCSEEEEEEEEEEETTE
T ss_pred hcCCCCCcEEEEeCCCEEEEEEEcCCCCceeeeEEEEEEEcCCCHHHHHHHHhCcch--HhhhhhhcceeEEEEEcCCCC
Confidence 34456899999999999999996432221112589999875 899999999999876 999999999999999999999
Q ss_pred eEEEEEecCCCCCCCCCCCeEEEEEEEEEc----CC--CeEEEEEeeccCCCCCCCCCeeeEE---EcceeEEEEecCCC
Q 006391 188 DVVYGTYDPKYLTRWQSKRDFVFSRQWFRG----QD--GTYTILQFPAVHKKRPPKSGYRRTK---INPSTWEIRSLNLP 258 (647)
Q Consensus 188 DIvY~~~~p~~lp~~vs~RDFV~LRswRr~----~d--GsYvIa~~SV~Hp~~Pp~~G~VRAe---i~~sGylI~P~~~~ 258 (647)
+|+|++++.. +++++||||++|+|++. ++ +.|+++.+|+.||.+|+++|||||+ ++++||+|+|..+.
T Consensus 120 ~i~y~~~~~p---~p~s~RDfV~~r~~~~~~~~~~~g~~~~~i~~~Sv~~~~~P~~~g~VR~~~~~~~~~~~~i~~~~g~ 196 (255)
T 2e3n_A 120 IIIYQTHKRV---WPASQRDVLYLSVIRKIPALTENDPETWIVCNFSVDHDSAPLNNRCVRAKINVAMICQTLVSPPEGN 196 (255)
T ss_dssp EEEEEEECCC---TTSCCEEEEEEEEEEEECCSSTTSCCEEEEEEEECCCTTSCCCSSSEECEEEEEEEEEEEEC---CC
T ss_pred EEEEEEeecC---CCcCCceeEEEEEEEeccccccCCCCEEEEEEeccCCCCCCCCCCCEEEEEEeeeeeeeEeccCCCC
Confidence 9999998854 47899999999999986 23 4899999999999999999999999 57899999997321
Q ss_pred C--CCCCCccEEEEEEEEcCCCccccccCcccceehhhHHHHHHHHHHHHHHhhcC
Q 006391 259 M--GSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFALLSQVAGLKEYIGAN 312 (647)
Q Consensus 259 ~--~~~~~~~~VT~I~qvDlkGw~~w~p~~~~~~~~~~~~~mL~~va~LRe~~~~~ 312 (647)
. ..++++|+|||++++|++||+ |.|+.. ..+...+...+.+||+++..+
T Consensus 197 ~~l~~~~~~t~vt~~~~~Dp~G~i---P~~lvn--~~~~~~~~~~l~~L~k~v~~~ 247 (255)
T 2e3n_A 197 QEISRDNILCKITYVANVNPGGWA---PASVLR--AVAKREYPKFLKRFTSYVQEK 247 (255)
T ss_dssp CCCCGGGEEEEEEEEEEEECSSCC---CHHHHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCcEEEEEEEEeCCCCcc---CHHHHH--HHHhccccHHHHHHHHHHHHh
Confidence 0 002358999999999999999 554422 122233456788888887643
No 10
>3tl1_A WHIE ORF VI, polyketide cyclase; helix-GRIP fold, polyketide C9-C14 aromatase/cyclase, linear beta-ketone intermediate; HET: JRO; 1.80A {Streptomyces coelicolor} PDB: 3tvr_A 2kf2_A
Probab=96.84 E-value=0.025 Score=53.31 Aligned_cols=143 Identities=12% Similarity=0.027 Sum_probs=90.0
Q ss_pred EEEEEeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCceeEEEEEecCCCCCCCCCCCeEEEEEEEEEcCCCe
Q 006391 142 VKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDGT 221 (647)
Q Consensus 142 ~Ka~~vVdaspe~Vfe~L~d~~~~~R~~WD~~~~~~evVE~iD~~tDIvY~~~~p~~lp~~vs~RDFV~LRswRr~~dGs 221 (647)
+.....|++||++||++|.|.+. -++|-+.+..+++++. +++...+...+.... ++ ..+.|+..+.+ +.++
T Consensus 5 v~~si~I~a~~~~V~~lV~Dve~--yP~~~p~~~~~~vl~~-~~~~~~~rl~~~~~~--~G-~~~~~ts~~~~--d~~~- 75 (159)
T 3tl1_A 5 TDNEITIAAPMELVWNMTNDIEK--WPGLFSEYASVEVLGR-DDDKVTFRLTMHPDA--DG-KVWSWVSERVA--DPVT- 75 (159)
T ss_dssp EEEEEEESSCHHHHHHHHTCGGG--HHHHCSSEEEEEEEEE-CSSEEEEEEEECCCT--TS-CCCEEEEEEEE--ETTT-
T ss_pred eEEEEEecCCHHHHHHHHHhHHH--hhhhhhCceEEEEEec-CCCEEEEEEEEEecc--Cc-eEEEEEEEEEE--cCCC-
Confidence 45667899999999999999975 7899999999999988 455455554322221 12 24567655543 2223
Q ss_pred EEEEEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccEEEEEEEEcCCCccccccCcccceehhhHHHHHHH
Q 006391 222 YTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFALLSQ 301 (647)
Q Consensus 222 YvIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~VT~I~qvDlkGw~~w~p~~~~~~~~~~~~~mL~~ 301 (647)
-.|..+.+. +. | ++ .+-+.|.++|++. .|+|++......++-. |.-...+...+-..+-..
T Consensus 76 ~~I~~~~~~-~g--P----f~--~l~g~W~f~p~~~-------gt~V~~~~df~~~~~~---p~~~~~~~~~~~~~~~~~ 136 (159)
T 3tl1_A 76 RTVRAQRVE-TG--P----FQ--YMNIVWEYAETAE-------GTVMRWTQDFAMKPDA---PVDDAWMTDNINRNSRTQ 136 (159)
T ss_dssp TEEEEEESS-CT--T----EE--EEEEEEEEEEETT-------EEEEEEEEEEEECTTC---SSCHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcc-CC--C----hh--hccCEEEEEECCC-------CEEEEEEEEEEecCCC---CCCHHHHHHHHHhhHHHH
Confidence 123334332 11 2 22 3457899999863 5999999999888766 421111223333344456
Q ss_pred HHHHHHHhhcC
Q 006391 302 VAGLKEYIGAN 312 (647)
Q Consensus 302 va~LRe~~~~~ 312 (647)
+++||+.+++.
T Consensus 137 L~~lK~~~E~~ 147 (159)
T 3tl1_A 137 MALIRDRIEQA 147 (159)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhhh
Confidence 78888877653
No 11
>1t17_A Conserved hypothetical protein; beta-alpha-beta-BETA-beta-BETA-beta-BETA-helix, structural G protein structure initiative, PSI, NESG; NMR {Caulobacter crescentus} SCOP: d.129.3.6
Probab=96.61 E-value=0.033 Score=50.62 Aligned_cols=113 Identities=12% Similarity=0.057 Sum_probs=77.9
Q ss_pred EEEEEEeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecC---ceeEEEEEecCCCCCCCCCCCeEEEEEEEEEc
Q 006391 141 LVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDG---HYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRG 217 (647)
Q Consensus 141 ~~Ka~~vVdaspe~Vfe~L~d~~~~~R~~WD~~~~~~evVE~iD~---~tDIvY~~~~p~~lp~~vs~RDFV~LRswRr~ 217 (647)
.+..+..|++||++||+++.|.+. .++|-+.+.+.++++.-++ +......... + +++ .+.|..-..+ .
T Consensus 3 ~~~~s~~i~ap~~~v~~~v~D~~~--~p~~~p~~~~~~v~~~~~~~g~~~~~~~~~~~--~--~~~-~~~~~~~v~~--~ 73 (148)
T 1t17_A 3 RHVVTKVLPYTPDQLFELVGDVDA--YPKFVPWITGMRTWNGRVDGAVSTVDAEAQVG--F--SFL-REKFATRVRR--D 73 (148)
T ss_dssp EEEEEEEESSCTHHHHHHHTTTTC--CSSCCSSCCCCCEEEEEEETTEEEEEEEEECS--T--TSS-CCEEEEEEEE--E
T ss_pred EEEEEEEecCCHHHHHHHHHHHhh--HHhhCCCcCeeEEEEecCCCCCceEEEEEEEE--e--cce-eEEEEEEEEE--c
Confidence 467788999999999999999986 8999999999999987652 2223333322 1 122 3446543332 2
Q ss_pred CCCeEEEEEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccEEEEEEEEcCCCcc
Q 006391 218 QDGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWC 280 (647)
Q Consensus 218 ~dGsYvIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~VT~I~qvDlkGw~ 280 (647)
.. .+.|..+++.- |-+. +-+.|.++|.++ + |+|++.+..+++|.+
T Consensus 74 ~~-~~~i~~~~~~G----~f~~------~~g~w~f~~~~~------g-t~v~~~~~~~~~~~l 118 (148)
T 1t17_A 74 KD-ARSIDVSLLYG----PFKR------LNNGWRFMPEGD------A-TRVEFVIEFAFKSAL 118 (148)
T ss_dssp TT-TCEEEEEESST----TSSC------EEEEEEEEEETT------E-EEEEEEEEECCSCHH
T ss_pred CC-CcEEEEEECCC----Chhc------cEEEEEEEECCC------C-eEEEEEEEEEECcHH
Confidence 22 25677777652 2211 356899999874 3 999999999999876
No 12
>2d4r_A Hypothetical protein TTHA0849; start domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.40A {Thermus thermophilus} SCOP: d.129.3.6
Probab=96.60 E-value=0.097 Score=45.70 Aligned_cols=140 Identities=16% Similarity=0.037 Sum_probs=79.1
Q ss_pred EEEEEEeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCceeEEEEEecCCCCCCCCCCCeEEEEEEEEEcCCC
Q 006391 141 LVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDG 220 (647)
Q Consensus 141 ~~Ka~~vVdaspe~Vfe~L~d~~~~~R~~WD~~~~~~evVE~iD~~tDIvY~~~~p~~lp~~vs~RDFV~LRswRr~~dG 220 (647)
.+..+..|++|+++||++|.|... .++|.+.+.+.++++.-++. ...+..+.. + +.. ..|. .+.. ..+.+
T Consensus 3 ~~~~~~~i~ap~~~V~~~l~d~~~--~~~w~p~~~~~~~~~~~~~g-~~~~~~~~~---~-g~~-~~~~-~~~~-~~~~~ 72 (147)
T 2d4r_A 3 EVRAERYIPAPPERVYRLAKDLEG--LKPYLKEVESLEVVAREGAR-TRSRWVAVA---M-GKK-VRWL-EEEE-WDDEN 72 (147)
T ss_dssp EEEEEEEESSCHHHHHHHHHCHHH--HGGGCTTEEEEEEEEEETTE-EEEEEEEEE---T-TEE-EEEE-EEEE-EETTT
T ss_pred eEEEEEEeCCCHHHHHHHHhChhh--hhhhcccccEEEEEEeCCCc-cEEEEEEEe---C-Cce-EEEE-EEEE-EcCCC
Confidence 467788999999999999999865 78999988888887765433 334443331 1 111 1122 1111 12223
Q ss_pred eEEEEEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccEEEEEEEEcCCCccccccCc-cccee-hhhHHHH
Q 006391 221 TYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNS-STKFE-KTTHFAL 298 (647)
Q Consensus 221 sYvIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~VT~I~qvDlkGw~~w~p~~-~~~~~-~~~~~~m 298 (647)
.. |..+.+.- |. + ...+.|.++|.++ + |+|++....+++|.+ +.. ...+. ..+-..+
T Consensus 73 ~~-i~~~~~~g---~~-----~--~~~~~~~~~~~~~------g-T~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 131 (147)
T 2d4r_A 73 LR-NRFFSPEG---DF-----D--RYEGTWVFLPEGE------G-TRVVLTLTYELTIPI---FGGLLRKLVQKLMQENV 131 (147)
T ss_dssp TE-EEEEEEEE---SC-----S--EEEEEEEEEECSS------S-EEEEEEEEEECCCTT---TTTTTHHHHHHHHHHHH
T ss_pred cE-EEEEeccC---Ch-----h--heEEEEEEEECCC------C-cEEEEEEEEecCCcc---HHHHHHHHHHHHHHHHH
Confidence 22 22233321 11 1 1234688899763 3 999999999999865 332 12111 1111223
Q ss_pred HHHHHHHHHHhhc
Q 006391 299 LSQVAGLKEYIGA 311 (647)
Q Consensus 299 L~~va~LRe~~~~ 311 (647)
-..+.+|++..++
T Consensus 132 ~~~l~~lk~~~e~ 144 (147)
T 2d4r_A 132 ESLLKGLEERVLA 144 (147)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 3456666666654
No 13
>3tvq_A Multifunctional cyclase-dehydratase-3-O-methyl TR TCMN; tetracenomycin, aromatase, taxifolin, dihyroquercet helix-GRIP fold; HET: DQH; 1.67A {Streptomyces glaucescens} PDB: 2rer_A 2res_A 2rez_A
Probab=96.59 E-value=0.032 Score=53.12 Aligned_cols=143 Identities=12% Similarity=0.041 Sum_probs=85.5
Q ss_pred EEEEEeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCceeEEEEEecCCCCCCCCCCCeEEEEEEEEEcCCCe
Q 006391 142 VKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDGT 221 (647)
Q Consensus 142 ~Ka~~vVdaspe~Vfe~L~d~~~~~R~~WD~~~~~~evVE~iD~~tDIvY~~~~p~~lp~~vs~RDFV~LRswRr~~dGs 221 (647)
+.....|++||++||++|.|.+. -++|.+.+..+++++.-+ +...+...+.... ++ ..+.|...+.. +.++
T Consensus 5 v~~si~I~a~~~~v~~lv~Dv~~--~p~w~p~~~~~~~~~~~~-~~~~~~l~~~~~~--~G-~~~~~ts~~~~--d~~~- 75 (169)
T 3tvq_A 5 TDNSIVVNAPFELVWDVTNDIEA--WPELFSEYAEAEILRQDG-DGFDFRLKTRPDA--NG-RVWEWVSHRVP--DKGS- 75 (169)
T ss_dssp EEEEEEESSCHHHHHHHHTCGGG--HHHHCTTEEEEEEEEEET-TEEEEEEEECCCT--TS-CCCEEEEEEEE--EGGG-
T ss_pred EEEEEEecCCHHHHHHHHHhhhH--HHHHHhheeEEEEEecCC-CEEEEEEEEEecC--CC-eEEEEEEEEEE--cCCC-
Confidence 45667899999999999999975 789999999999999843 3222222112221 12 24456544432 2222
Q ss_pred EEEEEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccEEEEEEEEcCCCccccccCcccceehhhHHHHHHH
Q 006391 222 YTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFALLSQ 301 (647)
Q Consensus 222 YvIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~VT~I~qvDlkGw~~w~p~~~~~~~~~~~~~mL~~ 301 (647)
-.|.++.+.- +| ++ .+-+.|.++|.+. + |+|++......++-. |.-...+...+-..+-..
T Consensus 76 ~~I~~~~l~~---gP----f~--~~~g~W~f~p~~~------g-t~V~~~~df~~~~~~---p~~~~~~~~av~~~~~~~ 136 (169)
T 3tvq_A 76 RTVRAHRVET---GP----FA--YMNLHWTYRAVAG------G-TEMRWVQEFDMKPGA---PFDNAHMTAHLNTTTRAN 136 (169)
T ss_dssp TEEEEEESSC---TT----EE--EEEEEEEEEEETT------E-EEEEEEEEEEECTTC---SSCHHHHHHHHHHHHHHH
T ss_pred cEEEEEEcCC---CC----hh--heeeEEEEEECCC------C-EEEEEEEEEEecCCC---cccHHHHHHHHHhhHHHH
Confidence 2233333322 12 22 2456899999874 4 999999999887655 321111222333333456
Q ss_pred HHHHHHHhhcC
Q 006391 302 VAGLKEYIGAN 312 (647)
Q Consensus 302 va~LRe~~~~~ 312 (647)
+++||+.+++.
T Consensus 137 L~~LK~~aE~~ 147 (169)
T 3tvq_A 137 MERIKKIIEDR 147 (169)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhhh
Confidence 77888777653
No 14
>3tfz_A Cyclase; helix-GRIP, BET V1-like superfamily, biosynthetic protein; HET: CXS; 2.39A {Streptomyces SP}
Probab=96.35 E-value=0.069 Score=50.21 Aligned_cols=147 Identities=13% Similarity=0.056 Sum_probs=86.2
Q ss_pred cEEEEEEeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCceeEEEEEecCCCCCCCCCCCeEEEEEEEEEcCC
Q 006391 140 VLVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQD 219 (647)
Q Consensus 140 ~~~Ka~~vVdaspe~Vfe~L~d~~~~~R~~WD~~~~~~evVE~iD~~tDIvY~~~~p~~lp~~vs~RDFV~LRswRr~~d 219 (647)
..+.....|++||++||++|.|.+. -++|-+.+.++++++.-++. ..+...... ++. .+-|...+. .+..
T Consensus 5 ~~v~~si~I~ap~~~V~~~v~D~~~--~p~~~P~~~~~~v~~~~~~~-~~~~~~~~~----~G~-~~~~~s~~~--~~~~ 74 (172)
T 3tfz_A 5 RHVEHTVTVAAPADLVWEVLADVLG--YADIFPPTEKVEILEEGQGY-QVVRLHVDV----AGE-INTWTSRRD--LDPA 74 (172)
T ss_dssp EEEEEEEEESSCHHHHHHHHHCGGG--HHHHCSSEEEEEEEEEETTE-EEEEEEEEE----TTE-EEEEEEEEE--EETT
T ss_pred cEEEEEEEeCCCHHHHHHHHHhHHH--HHhhCcccceEEEEecCCCE-EEEEEEEec----CCE-EEEEEEEEE--EeCC
Confidence 3567778899999999999999976 88999999999999875433 334433321 111 122332222 2232
Q ss_pred CeEEEEEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccEEEEEEEEcCCCcc--ccccCccc-c-----ee
Q 006391 220 GTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWC--RWKKNSST-K-----FE 291 (647)
Q Consensus 220 GsYvIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~VT~I~qvDlkGw~--~w~p~~~~-~-----~~ 291 (647)
+ -.|..+++..+ |-++. +.+-|.++|.++ ++|+|++.+..++++-. ..+-.... . +.
T Consensus 75 ~-~~i~~~~~~~~------gpf~~--~~g~w~f~~~~~------~~t~V~~~~~~~~~~~~l~~~lg~~~~~~~~~~~~~ 139 (172)
T 3tfz_A 75 R-RVIAYRQLETA------PIVGH--MSGEWRAFTLDA------ERTQLVLTHDFVTRAAGDDGLVAGKLTPDEAREMLE 139 (172)
T ss_dssp T-TEEEEEEEECC------TTEEE--EEEEEEEEEEET------TEEEEEEEEEEEECCCCTTSSBTTTBCHHHHHHHHH
T ss_pred C-CEEEEEEeeCC------CChhh--cEEEEEEEECCC------CcEEEEEEEEEEEcChhHHHhhccccCchhhHHHHH
Confidence 3 23445555321 22222 345788999864 57999999998876543 11100000 0 11
Q ss_pred hhhHHHHHHHHHHHHHHhhc
Q 006391 292 KTTHFALLSQVAGLKEYIGA 311 (647)
Q Consensus 292 ~~~~~~mL~~va~LRe~~~~ 311 (647)
+.+--.+...+++||++.++
T Consensus 140 ~~l~~~~~~~L~~lk~~aE~ 159 (172)
T 3tfz_A 140 AVVERNSVADLNAVLGEAER 159 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcccHHHHHHHHHHHHH
Confidence 12222334578888888865
No 15
>2pcs_A Conserved protein; structural genomics, unknown function, ligand binding, PSI-2 structure initiative; HET: UNL; 2.40A {Geobacillus kaustophilus} SCOP: d.129.3.10
Probab=95.73 E-value=0.17 Score=46.30 Aligned_cols=143 Identities=8% Similarity=-0.039 Sum_probs=80.0
Q ss_pred EEEEEeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCceeEEEEEecCCCCCCCCCCCeEEE-EEEEEEcCCC
Q 006391 142 VKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVF-SRQWFRGQDG 220 (647)
Q Consensus 142 ~Ka~~vVdaspe~Vfe~L~d~~~~~R~~WD~~~~~~evVE~iD~~tDIvY~~~~p~~lp~~vs~RDFV~-LRswRr~~dG 220 (647)
+..+..|++||++||+.|.|.+. .++|.+.+.+. +.+++..-..-...+ . +++ ...|.. .+....+...
T Consensus 5 i~~~~~i~ap~e~Vw~~l~D~e~--~~~w~p~~~~~---~~~~~~~~~~~~~~~--~--g~~-~~~~~~~~~~~~~~~~~ 74 (162)
T 2pcs_A 5 GNGSIELKGTVEEVWSKLMDPSI--LSKCIMGCKSL---ELIGEDKYKADLQIG--I--AAV-KGKYDAIIEVTDIKPPY 74 (162)
T ss_dssp EEEEEEEESCHHHHHHHHTCHHH--HHHHSTTEEEE---EEEETTEEEEEEEEC--C--GGG-CEEEEEEEEEEEEETTT
T ss_pred EeeEEEecCCHHHHHHHhcCHHH--HHhhCCCceEe---EEeCCCeEEEEEEEE--e--eeE-EEEEEEEEEEEecCCCc
Confidence 55667899999999999999865 77898765444 444444321111112 1 112 123432 2222334444
Q ss_pred eEEEEEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccEEEEEEEEcCCCccccccCcccceehhhHHHH-H
Q 006391 221 TYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFAL-L 299 (647)
Q Consensus 221 sYvIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~VT~I~qvDlkGw~~w~p~~~~~~~~~~~~~m-L 299 (647)
.+.+...+..- ++.+++ .+-|.++|..+ +.|+|+|-...+.+|.+. .....+.......+ -
T Consensus 75 ~~~~~~~~~~~------~~~~~~---~~~~~l~~~~~------~gT~v~~~~~~~~~g~l~---~~~~~l~~~~~~~~~~ 136 (162)
T 2pcs_A 75 HYKLLVNGEGG------PGFVNA---EGVIDLTPIND------ECTQLTYTYSAEVGGKVA---AIGQRMLGGVAKLLIS 136 (162)
T ss_dssp EEEEEEEEEET------TEEEEE---EEEEEEEESSS------SEEEEEEEEEEEEESGGG---GGCHHHHHHHHHHHHH
T ss_pred EEEEEEEecCC------CccEEE---EEEEEEEecCC------CcEEEEEEEEEEECCCHH---HhhHHHHHHHHHHHHH
Confidence 55554443211 233443 35788898654 479999999999999872 21121222222222 3
Q ss_pred HHHHHHHHHhhcC
Q 006391 300 SQVAGLKEYIGAN 312 (647)
Q Consensus 300 ~~va~LRe~~~~~ 312 (647)
..+.+|++.++++
T Consensus 137 ~~~~~lk~~~e~~ 149 (162)
T 2pcs_A 137 DFFKKIQKEIAKS 149 (162)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHhccc
Confidence 4667787777754
No 16
>3ggn_A Uncharacterized protein DR_A0006; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Deinococcus radiodurans R1} PDB: 2kcz_A
Probab=95.69 E-value=0.18 Score=46.37 Aligned_cols=144 Identities=11% Similarity=-0.019 Sum_probs=78.6
Q ss_pred cEEEEEEeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCceeEEEEEecCCCCCCCCCCCeEEEEEEEEEcCC
Q 006391 140 VLVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQD 219 (647)
Q Consensus 140 ~~~Ka~~vVdaspe~Vfe~L~d~~~~~R~~WD~~~~~~evVE~iD~~tDIvY~~~~p~~lp~~vs~RDFV~LRswRr~~d 219 (647)
..+..+..|++|+++||+++.|.+. -++|.+.+.+++++ ++. ....+.+. +.+.....|. .+.....+
T Consensus 4 ~~v~~s~~I~ap~e~V~~~~~D~e~--~p~w~p~~~~v~~~---~~~--~~~~~~~~---~~G~~~~~~~-~~v~e~~p- 71 (155)
T 3ggn_A 4 TVVRDAVTIGKPAEQLYAVWRDLPG--LPLLMTHLRSVEVL---DDK--RSRWTVEA---PAPLGTVSWE-AELTADEP- 71 (155)
T ss_dssp CEEEEEEEESSCHHHHHHHHHCGGG--HHHHSTTCCEEEEC---SSS--EEEEEEEC---CTTTCEEEEE-EEEEEEET-
T ss_pred cEEEEEEEEcCCHHHHHHHHhCHHH--hHHHhhhceEEEEe---cCC--eeEEEEEe---cCCcceEEEE-EEEEEecC-
Confidence 3567788999999999999999976 88999988776665 332 23333332 2111223332 12222222
Q ss_pred CeEEEEEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccEEEEEEEEcCCC-ccccccCcccceehhhHHHH
Q 006391 220 GTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSG-WCRWKKNSSTKFEKTTHFAL 298 (647)
Q Consensus 220 GsYvIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~VT~I~qvDlkG-w~~w~p~~~~~~~~~~~~~m 298 (647)
+.. |..+++.-|. . . ..+.|.++|.++ +++|+|++.+..++.| .+. .....+.+.+..++
T Consensus 72 ~~~-i~~~~~~g~~---~--~-----~~g~~~F~~~~~-----~~gT~V~~~~~~~~~~~~l~---~~~~~~~~~~~~~~ 132 (155)
T 3ggn_A 72 GKR-IAWRSLPGAR---I--E-----NSGEVLFRPAPG-----ARGTEVVVRLTYRPPGGSAG---AVIARMFNQEPSQQ 132 (155)
T ss_dssp TTE-EEEEECTTCS---S--C-----EEEEEEEEECSS-----SSCEEEEEEEEEC-------------------CHHHH
T ss_pred CCE-EEEEECCCCC---c--c-----eEEEEEEEECCC-----CCceEEEEEEEEECCCcHHH---HHHHHHhhhhHHHH
Confidence 323 4556654431 1 1 234678889842 1479999999999876 441 11122223233333
Q ss_pred -HHHHHHHHHHhhcCCC
Q 006391 299 -LSQVAGLKEYIGANPA 314 (647)
Q Consensus 299 -L~~va~LRe~~~~~~~ 314 (647)
-..+.++++++++--+
T Consensus 133 v~~~l~r~k~~~e~~~~ 149 (155)
T 3ggn_A 133 LRDDLMRFKREQELGLE 149 (155)
T ss_dssp HHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHhhhh
Confidence 3578889998887543
No 17
>3p9v_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.78A {Marinobacter aquaeolei}
Probab=95.51 E-value=0.28 Score=45.59 Aligned_cols=112 Identities=9% Similarity=0.022 Sum_probs=70.7
Q ss_pred EEEEEeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCceeEEEEEe-cCCCCCCCCC-CCeEEEEEEEEEcCC
Q 006391 142 VKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTY-DPKYLTRWQS-KRDFVFSRQWFRGQD 219 (647)
Q Consensus 142 ~Ka~~vVdaspe~Vfe~L~d~~~~~R~~WD~~~~~~evVE~iD~~tDIvY~~~-~p~~lp~~vs-~RDFV~LRswRr~~d 219 (647)
+..+..|++||++||++|.|.+ + |-..+.+....+..+++ ...... +-.. +... ..-|..-..+. .+
T Consensus 9 v~~s~~I~ap~e~v~~lv~Dve---~--w~~~yp~~~p~~~~~~~--~~~~~~a~l~v--g~~~~~~~~~s~~~~~--~~ 77 (161)
T 3p9v_A 9 LNRDLEIPASYDEVFDLLADVP---K--SASHFPKVDKLVDLGNN--AYRWEMEKVGV--DKHAIQSVYACTYHAD--KE 77 (161)
T ss_dssp EEEEEEESSCHHHHHHHHTCHH---H--HHTTSTTEEEEEEEETT--EEEEEECCBSS--GGGCBCCEEEEEEEEE--TT
T ss_pred EEEEEEEcCCHHHHHHHHhChh---h--hHhhCCCeEEEEEcCCC--ceEEEEEEEee--eeEEEEEEEEEEEEEc--CC
Confidence 4555689999999999999873 3 88889999888888776 223333 2111 1222 23455433332 22
Q ss_pred CeEEEEEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccEEEEEEEEcCCCcc
Q 006391 220 GTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWC 280 (647)
Q Consensus 220 GsYvIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~VT~I~qvDlkGw~ 280 (647)
+. .|..+++..| -. + .+-+.|.++|.++ +.|+|++.+..++++.+
T Consensus 78 ~~-~I~~~~~~g~---~~----~--~l~g~w~f~p~~~------g~t~V~~~~~~e~~~pl 122 (161)
T 3p9v_A 78 AG-KITWSPIKGE---GN----G--VVSGSWTLSAKGD------NATAVKFQTSAELTVPL 122 (161)
T ss_dssp TT-EEEEEECTTS---TT----E--EEEEEEEEEESSS------SCEEEEEEEEEEEEECS
T ss_pred CC-EEEEEEecCc---cc----e--eEEEEEEEEECCC------CeEEEEEEEEEEEcCcc
Confidence 22 3455555321 11 1 2346899999875 57999999999999666
No 18
>2ns9_A Hypothetical protein APE2225; uncharacterized conserved protein, structural genomics, PSI, structure initiative; 1.80A {Aeropyrum pernix} SCOP: d.129.3.10
Probab=95.01 E-value=0.83 Score=41.00 Aligned_cols=139 Identities=9% Similarity=-0.038 Sum_probs=73.0
Q ss_pred EEEEEeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCceeEEEEEecCCCCCCCCCCCeEEE-EEEEEEcCCC
Q 006391 142 VKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVF-SRQWFRGQDG 220 (647)
Q Consensus 142 ~Ka~~vVdaspe~Vfe~L~d~~~~~R~~WD~~~~~~evVE~iD~~tDIvY~~~~p~~lp~~vs~RDFV~-LRswRr~~dG 220 (647)
+..+..|++||++||+.|.|.+. -++|.+.+ .-++ ++++.-.+....+. ++.+ ..|-. ++....++..
T Consensus 15 i~~~~~i~ap~e~Vw~~l~D~~~--~~~w~p~~---~~~~-~~~~~~~~~~~~~~----g~~~-~~~~~~~~~~~~~~~~ 83 (157)
T 2ns9_A 15 YEGSFEVSKTPEEVFEFLTDPKR--FSRAFPGF---KSVE-VEDGSFTIELRLSL----GPLR-GDARVRASFEDLEKPS 83 (157)
T ss_dssp EEEEEEESSCHHHHHHHHTCHHH--HGGGSTTE---EEEE-EETTEEEEEEEEES----SSSE-EEEEEEEEEEEEETTT
T ss_pred EeeEEEEcCCHHHHHHHHcCHHH--HHhhCCCc---eEEE-ECCCEEEEEEEEEE----ccee-EEEEEEEEEEecCCCc
Confidence 56667899999999999999865 67898764 4444 55553222222111 1221 12321 1211223333
Q ss_pred eEEEEEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccEEEEEEEEcCCCccccccCcccceehhhHHHH-H
Q 006391 221 TYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFAL-L 299 (647)
Q Consensus 221 sYvIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~VT~I~qvDlkGw~~w~p~~~~~~~~~~~~~m-L 299 (647)
.+.+...... .+ +-++ ..+-|.++|.+ ++|+|++-...+.+|.+ ......+...+..++ -
T Consensus 84 ~i~~~~~~~~---~~---~~~~---~~~~~~l~~~~-------~gT~v~~~~~~~~~g~l---~~~~~~~~~~~~~~~~~ 144 (157)
T 2ns9_A 84 KATVKGSGRG---AG---STLD---FTLRFAVEPSG-------GGSRVSWVFEGNVGGLA---ASMGGRVLDSLARRMIN 144 (157)
T ss_dssp EEEEEEEEEC---SS---EEEE---EEEEEEEEEET-------TEEEEEEEEEEEEEEGG---GGSCHHHHHHHHHHHHH
T ss_pred EEEEEEEecC---CC---ccEE---EEEEEEEEeCC-------CcEEEEEEEEEEECcCH---HHhhHHHHHHHHHHHHH
Confidence 4433222211 00 1122 23568888865 36999999999998876 221121222222222 2
Q ss_pred HHHHHHHHHhh
Q 006391 300 SQVAGLKEYIG 310 (647)
Q Consensus 300 ~~va~LRe~~~ 310 (647)
..+.+|++.++
T Consensus 145 ~~~~~lk~~~e 155 (157)
T 2ns9_A 145 DVISGVKRELG 155 (157)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 45566666654
No 19
>3f08_A Uncharacterized protein Q6HG14; NESG Q6HG14_bachk Q6HG14 BUR153, structural genomics, PSI-2; 2.20A {Bacillus thuringiensis serovar konkukiorganism_taxid} SCOP: d.129.3.8 PDB: 3cnw_A
Probab=94.84 E-value=0.51 Score=43.38 Aligned_cols=136 Identities=11% Similarity=-0.014 Sum_probs=79.6
Q ss_pred EEEEEeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCceeEEEEEecCCCCCCCCCCCeEEEEEEEEEcCCCe
Q 006391 142 VKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDGT 221 (647)
Q Consensus 142 ~Ka~~vVdaspe~Vfe~L~d~~~~~R~~WD~~~~~~evVE~iD~~tDIvY~~~~p~~lp~~vs~RDFV~LRswRr~~dGs 221 (647)
+..+.+|+|||++||++|.|... -++|.+.+.++++++ ++. |-...+.. + . .+.-|-...++++
T Consensus 4 v~~si~I~Ap~~~VW~~l~d~~~--~~~w~p~v~~~~~~~--GG~--vR~~~~~~----G-~----~~~Erl~~~D~~~- 67 (146)
T 3f08_A 4 TTTSMEIFGSTEQVWQLIGGFNS--LPDWLPYIPSSKLTE--GGR--VRHLANPD----G-E----TIIERLEVFNDKE- 67 (146)
T ss_dssp EEEEEEESSCHHHHHHHHCSTTC--HHHHCTTCCEEEEEG--GGT--EEEEECTT----S-C----EEEEEEEEEETTT-
T ss_pred EEEEEEEeCCHHHHHHHHhcccc--HHHhCCCeEEEEEeC--CCe--EEEEEeCC----C-C----EEEEEEEEEeCCC-
Confidence 56677899999999999999875 678999999998875 232 33333221 1 1 2222222223322
Q ss_pred EEEEEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccEEEEEEEEcCCCccccccCcccceehhhHHHHHHH
Q 006391 222 YTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFALLSQ 301 (647)
Q Consensus 222 YvIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~VT~I~qvDlkGw~~w~p~~~~~~~~~~~~~mL~~ 301 (647)
..+.++=++- ..| + ....+-|-+.|... +++|.|+|....++.|... . .+...+-..+-..
T Consensus 68 ~~~~y~iv~g-~~~-----~--~~~~~~~~v~p~~~-----~~gt~v~w~~~~~p~g~~~---~---~~~~~~~~~~~~~ 128 (146)
T 3f08_A 68 RYYTYSIMNA-PFP-----V--TNYLSTIQVKEGTE-----SNTSLVEWSGTFTPVAVSD---E---EAINLVHGIYSDG 128 (146)
T ss_dssp TEEEEEEEEC-SSS-----E--EEEEEEEEEEECSS-----TTCEEEEEEEEEEESSSCH---H---HHHHHHHHHHHHH
T ss_pred CEEEEEEecC-CCc-----e--eEEEEEEEEEEecC-----CCcEEEEEEEEEEeCCCCH---H---HHHHHHHHHHHHH
Confidence 2223322221 122 2 34456788888422 2579999999999977662 1 1122222333467
Q ss_pred HHHHHHHhhcC
Q 006391 302 VAGLKEYIGAN 312 (647)
Q Consensus 302 va~LRe~~~~~ 312 (647)
+++|++.++..
T Consensus 129 L~~Lk~~~e~~ 139 (146)
T 3f08_A 129 LKALQHAFLDL 139 (146)
T ss_dssp HHHHHHHTTC-
T ss_pred HHHHHHHHhhh
Confidence 77888777654
No 20
>2le1_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative, unknown function; NMR {Thermobifida fusca}
Probab=92.28 E-value=1.4 Score=39.69 Aligned_cols=140 Identities=11% Similarity=0.027 Sum_probs=76.9
Q ss_pred EEEEEeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCce-eEEEEEecCCCCCCCCCCCeEEEEEEEEEcCCC
Q 006391 142 VKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHY-DVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDG 220 (647)
Q Consensus 142 ~Ka~~vVdaspe~Vfe~L~d~~~~~R~~WD~~~~~~evVE~iD~~t-DIvY~~~~p~~lp~~vs~RDFV~LRswRr~~dG 220 (647)
+..+..|++||++||++|.|... -++|.+.+.++++++.=++.. .+....++ .+. .+.-+-...++.+
T Consensus 4 v~~si~I~ap~e~Vw~~l~d~~~--~~~w~p~v~~~~~~~g~~~~~G~~r~~~~~-----~G~----~~~e~i~~~d~~~ 72 (151)
T 2le1_A 4 LRRSVEVAAPAADVWTLVGDFSA--IHRWHPQVSAPTLRGASPHTPGAERVFGAG-----TEE----ELVERLVERDESA 72 (151)
T ss_dssp EEEEEEESSCHHHHHHHHTTSGG--GGGTCTTCCCEEEESSCTTSTTCEEEESSS-----SSS----CEEEEEEEEETTT
T ss_pred EEEEEEecCCHHHHHHHHhCcCc--HHHhcCCceEEEEECCCCCCCCeEEEEEeC-----CCC----EEEEEEEEEeCCC
Confidence 56778899999999999999865 679999988888765321111 12222211 111 2222222223322
Q ss_pred eEEEEEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccEEEEEEEEcC--CCccccccCcccceehhhHHHH
Q 006391 221 TYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHS--SGWCRWKKNSSTKFEKTTHFAL 298 (647)
Q Consensus 221 sYvIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~VT~I~qvDl--kGw~~w~p~~~~~~~~~~~~~m 298 (647)
..+.++-+.-+ . | ++. ..+-|.++|.++ ++|+|+|-...++ .|-.... .. +.+.. +
T Consensus 73 -~~~~~~~~~g~-~-~----~~~--~~~~~~l~~~~~------~gt~v~w~~~f~~~p~~~~~~~---~~-~~~~~---~ 130 (151)
T 2le1_A 73 -RRLVYTMPDPP-F-P----ITN--HRAVLEVVPRDD------RHCTVVWTAMFDCSPETARELE---SV-IGDGV---F 130 (151)
T ss_dssp -TEEEEEEEECS-S-S----EEE--EEEEEEEEESSS------SCEEEEEEEEEEECHHHHHHHH---HH-TTTTH---H
T ss_pred -CEEEEEEecCC-C-C----cee--EEEEEEEEECCC------CcEEEEEEEEEEecCCCCCHHH---HH-HHHHH---H
Confidence 22333333211 1 1 222 245688888543 4699999999987 4332110 01 11222 3
Q ss_pred HHHHHHHHHHhhcCCC
Q 006391 299 LSQVAGLKEYIGANPA 314 (647)
Q Consensus 299 L~~va~LRe~~~~~~~ 314 (647)
-..+++|+..++.+..
T Consensus 131 ~~~L~~Lk~~~e~~~~ 146 (151)
T 2le1_A 131 AVGLNALAERYGRLEH 146 (151)
T ss_dssp HHHHHHHHHHTTTTSC
T ss_pred HHHHHHHHHHhhcccc
Confidence 3577888888876543
No 21
>3ijt_A SMU.440, putative uncharacterized protein; hypothetical protein, unknown function; 2.38A {Streptococcus mutans} SCOP: d.129.3.9 PDB: 2b79_A
Probab=91.40 E-value=3.3 Score=38.42 Aligned_cols=36 Identities=3% Similarity=0.140 Sum_probs=29.9
Q ss_pred EEEEEEeecCCHHHHHHHHHccCCcccccccCCCCceE
Q 006391 141 LVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLE 178 (647)
Q Consensus 141 ~~Ka~~vVdaspe~Vfe~L~d~~~~~R~~WD~~~~~~e 178 (647)
.+..+..|+|||++|+++|.|... -++|++.+.+++
T Consensus 19 ~i~~si~I~Appe~VW~~ltD~~~--~~~W~p~v~~~~ 54 (155)
T 3ijt_A 19 KFSFELAVNTKKEDAWTYYSQVNQ--WFVWEGDLEQIS 54 (155)
T ss_dssp EEEEEEEESSCHHHHHHHHHCGGG--GGGTSTTEEEEE
T ss_pred EEEEEEEEcCCHHHHHHHHhCccc--ccccchhhEeee
Confidence 556677899999999999999865 779999876554
No 22
>3p51_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 2.06A {Nitrosospira multiformis}
Probab=89.02 E-value=9.4 Score=35.52 Aligned_cols=138 Identities=13% Similarity=0.018 Sum_probs=78.1
Q ss_pred EEEEEeecCCHHHHHHHHHccCCcccccccCCCCce-EEEEeecCc-eeEEEEEecCCCCCCCCCCCeEEEEEEEEEcCC
Q 006391 142 VKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDL-ELVDSYDGH-YDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQD 219 (647)
Q Consensus 142 ~Ka~~vVdaspe~Vfe~L~d~~~~~R~~WD~~~~~~-evVE~iD~~-tDIvY~~~~p~~lp~~vs~RDFV~LRswRr~~d 219 (647)
+..+.+|+|||++||.+|.|... - .|.+.+.++ ++++--+++ ..-+... . + .+.=|--..+++
T Consensus 4 v~~si~I~Ap~~~VW~~v~Df~~--~-~w~P~v~~s~e~~eg~~~~~vGsvR~~-g-----g------~v~Erl~~~D~~ 68 (160)
T 3p51_A 4 VYNSIVVDAPVERVWSRIRNFHD--F-SWAPSLIKSCKKVGGGGGYSVGARRLL-N-----G------EFLDTLIAYSEI 68 (160)
T ss_dssp EEEEEEESSCHHHHHHHHCCTTC--C-TTCTTTCCCEEEESSCCTTCTTCEEEE-T-----T------TEEEEEEEEETT
T ss_pred EEEEEEECCCHHHHHHHHhCcCC--C-eEccCceEEEEEEecCCCCCCCCEEEE-C-----C------EEEEEEEEEcCC
Confidence 56677899999999999999876 5 999999888 776543211 1112221 1 1 121111112332
Q ss_pred CeEEEEEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccEEEEEEEEcCCCccccccCcccceehhhHHHHH
Q 006391 220 GTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFALL 299 (647)
Q Consensus 220 GsYvIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~VT~I~qvDlkGw~~w~p~~~~~~~~~~~~~mL 299 (647)
+ ..+.++=++- ..|..++.++. ..+-+-+.|.+. .++|.|+|.+..++.+-. . . ..+-..+-
T Consensus 69 ~-~~~sY~ii~g-~l~~~~~~~~~--y~~~~~v~p~~~-----~ggt~V~w~~~~~~~~~~--~----~---~~~~~~~~ 130 (160)
T 3p51_A 69 E-RRIMYSMDEG-PSPVSSGEIYN--YVGNLHLLPVTI-----DDTTFVEWSGSWESASTE--A----V---EYMNTVYR 130 (160)
T ss_dssp T-TEEEEEEEEC-STTSSTTTEEE--EEEEEEEEEETT-----TTEEEEEEEEEEEESCSH--H----H---HHHHHHHH
T ss_pred C-cEEEEEEecC-CCcccccceeE--EEEEEEEEEecC-----CCCEEEEEEEEEEeCHHH--H----H---HHHHHHHH
Confidence 2 2222222221 23322223443 356788899863 257999999999997521 1 1 22222334
Q ss_pred HHHHHHHHHhhcC
Q 006391 300 SQVAGLKEYIGAN 312 (647)
Q Consensus 300 ~~va~LRe~~~~~ 312 (647)
..+++|++.++..
T Consensus 131 ~~L~~Lk~~~e~~ 143 (160)
T 3p51_A 131 SLLADLAAEFTSE 143 (160)
T ss_dssp HHHHHHHHHSCTT
T ss_pred HHHHHHHHHHhhc
Confidence 5778888888764
No 23
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.49 E-value=0.8 Score=39.97 Aligned_cols=32 Identities=13% Similarity=0.323 Sum_probs=26.5
Q ss_pred CcceeecccCHHHHHHHHHHHHHHHHHHHHHH
Q 006391 10 SKKGEIACATAGEARKWMEAFDQAKQQAEVEL 41 (647)
Q Consensus 10 ~~~~~~~~~~~eea~~w~~~~~~~~~~~~~~~ 41 (647)
.+...|.|.|.+|+..|+++|+.|+.......
T Consensus 79 ~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~~ 110 (120)
T 2d9x_A 79 GEQYKLRATDAKERQHWVSRLQICTQHHTEAI 110 (120)
T ss_dssp SCCEEECCSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCHHHHHHHHHHHHHHHHHhhhhh
Confidence 36788999999999999999999998544333
No 24
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=85.64 E-value=0.69 Score=43.04 Aligned_cols=38 Identities=8% Similarity=0.191 Sum_probs=30.0
Q ss_pred CeeecCCC---CCcceeecccCHHHHHHHHHHHHHHHHHHH
Q 006391 1 MRLYNRLD---ESKKGEIACATAGEARKWMEAFDQAKQQAE 38 (647)
Q Consensus 1 ~~~yn~~~---~~~~~~~~~~~~eea~~w~~~~~~~~~~~~ 38 (647)
|+||+..+ +..-|.++|.|.+|-.+|+++|.+||++..
T Consensus 85 ~~l~s~~~G~~~k~~i~~~A~s~~ER~rwi~dL~esI~e~~ 125 (140)
T 3qwm_A 85 IRLTSSVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQ 125 (140)
T ss_dssp EEEEECCTTSCCEEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCCcceEEEEEECCCHHHHHHHHHHHHHHHHHHH
Confidence 46776652 233489999999999999999999999544
No 25
>2qpv_A Uncharacterized protein ATU1531; structural genomics, PSI protein structure initiative, midwest center for structural genomics; 2.35A {Agrobacterium tumefaciens str} SCOP: d.129.3.8
Probab=84.44 E-value=13 Score=34.50 Aligned_cols=35 Identities=9% Similarity=-0.017 Sum_probs=30.8
Q ss_pred EEEEEEeecCCHHHHHHHHHccCCcccccccCCCCce
Q 006391 141 LVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDL 177 (647)
Q Consensus 141 ~~Ka~~vVdaspe~Vfe~L~d~~~~~R~~WD~~~~~~ 177 (647)
.......|++||++||+++.|++. -++|-..+.+.
T Consensus 28 ~~~~si~I~ap~eeVy~~~~D~e~--lP~W~~~l~~~ 62 (156)
T 2qpv_A 28 SRIIHLSVEKPWAEVYDFAANPGN--MPRWAAGLAGG 62 (156)
T ss_dssp EEEEEEEESSCHHHHHHHHHCGGG--GGGTCGGGTTC
T ss_pred ceEEEEEEcCCHHHHHHHHHChhh--HHHHHHhhhhh
Confidence 346677899999999999999986 89999999885
No 26
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=82.38 E-value=0.79 Score=40.03 Aligned_cols=32 Identities=19% Similarity=0.233 Sum_probs=25.3
Q ss_pred CcceeecccCHHHHHHHHHHHHHHHHHHHHHH
Q 006391 10 SKKGEIACATAGEARKWMEAFDQAKQQAEVEL 41 (647)
Q Consensus 10 ~~~~~~~~~~~eea~~w~~~~~~~~~~~~~~~ 41 (647)
.+...|.|.|.+|+..|+++|+.|+.+...++
T Consensus 87 ~r~~~l~a~s~~e~~~Wi~al~~~i~~~~~~~ 118 (126)
T 1fao_A 87 FRTFYLCAKTGVEADEWIKILRWKLSQIRKQL 118 (126)
T ss_dssp TEEEEEECSSHHHHHHHHHHHHHHHHTC----
T ss_pred CcEEEEECCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 56688999999999999999999999654444
No 27
>1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A 2lpx_A
Probab=81.20 E-value=22 Score=32.76 Aligned_cols=149 Identities=8% Similarity=0.026 Sum_probs=85.3
Q ss_pred EEEEEeecCCHHHHHHHHH-ccCCcccccccC-CCCceEEEEeecC-ceeEEEEEecCCCCCCCCCCCeEEEEEEEEEcC
Q 006391 142 VKAVGVIDASADTVFEVVL-NLERHQRYEWDM-LTGDLELVDSYDG-HYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQ 218 (647)
Q Consensus 142 ~Ka~~vVdaspe~Vfe~L~-d~~~~~R~~WD~-~~~~~evVE~iD~-~tDIvY~~~~p~~lp~~vs~RDFV~LRswRr~~ 218 (647)
+..+..|++||+++|.++. |... ..+.|-+ .+.+++++|- |+ .-.|.+..+.+. ... -++.-|--..+
T Consensus 5 ~~~e~~i~ap~~~vw~~~~~d~~~-~~pk~~P~~i~s~~~~eG-dgg~Gsvr~~~~~~G-----~~~-~~~kErl~~~D- 75 (159)
T 1e09_A 5 YESEFTSEIPPPRLFKAFVLDADN-LVPKIAPQAIKHSEILEG-DGGPGTIKKITFGEG-----SQY-GYVKHKIDSID- 75 (159)
T ss_dssp EEEEEEESSCHHHHHHHHTTTHHH-HHHHHCTTTEEEEEEEES-SSSTTCEEEEEECCS-----SSC-EEEEEEEEEEE-
T ss_pred EEEEEEecCCHHHHHHHHhcCccc-cchhhChhhccEEEEEeC-CCCCceEEEEEecCC-----CCc-eEEEEEEEEEc-
Confidence 4566789999999999998 7753 3589998 5688888886 33 223555555431 111 12322222223
Q ss_pred CCeEEEEEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccEEEEEEEEcCCCccccccCcccceehhhHHHH
Q 006391 219 DGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFAL 298 (647)
Q Consensus 219 dGsYvIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~VT~I~qvDlkGw~~w~p~~~~~~~~~~~~~m 298 (647)
+....+.++-++-+-.+ .- -+...+-+-+.|.+. +.|.++|.+..+.+|-.. +. ..-.......+
T Consensus 76 ~~~~~~~y~iieG~~~~---~~--~~~~~~~~~v~~~~~------~gs~v~wt~~y~~~~~~~--~~--~~~~~~~~~~~ 140 (159)
T 1e09_A 76 KENYSYSYTLIEGDALG---DT--LEKISYETKLVASPS------GGSIIKSTSHYHTKGNVE--IK--EEHVKAGKEKA 140 (159)
T ss_dssp TTTTEEEEEECCCTTTG---GG--EEEEEEEEEECCCTT------SSEEEEEEEEEEECSSCC--CC--HHHHHHHHHHH
T ss_pred CCCCEEEEEEEecccCc---cc--ceEEEEEEEEEecCC------CCEEEEEEEEEEECCCCC--CC--HHHHHHHHHHH
Confidence 33455555555443221 00 123345566667543 359999999999876541 22 11111223334
Q ss_pred HHHHHHHHHHhhcCCC
Q 006391 299 LSQVAGLKEYIGANPA 314 (647)
Q Consensus 299 L~~va~LRe~~~~~~~ 314 (647)
.....+|.+|+.+++.
T Consensus 141 ~~~~k~ie~yll~~~~ 156 (159)
T 1e09_A 141 SNLFKLIETYLKGHPD 156 (159)
T ss_dssp HHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHhChh
Confidence 4567788888887765
No 28
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=80.83 E-value=1.1 Score=38.81 Aligned_cols=29 Identities=10% Similarity=0.331 Sum_probs=25.5
Q ss_pred CCcceeecccCHHHHHHHHHHHHHHHHHH
Q 006391 9 ESKKGEIACATAGEARKWMEAFDQAKQQA 37 (647)
Q Consensus 9 ~~~~~~~~~~~~eea~~w~~~~~~~~~~~ 37 (647)
..+...|.|.|.+|+..|+++|+.|+.++
T Consensus 75 ~~r~~~l~a~s~~e~~~Wi~al~~~~~~~ 103 (114)
T 2da0_A 75 HNRTYHFQAEDEQDYVAWISVLTNSKEEA 103 (114)
T ss_dssp TTEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 35677899999999999999999999854
No 29
>1tw0_A Pathogenesis-related class 10 protein SPE-16; seven antiparallel beta-sheet, plant protein; 2.20A {Pachyrhizus erosus} SCOP: d.129.3.1 PDB: 1txc_A*
Probab=80.27 E-value=36 Score=31.29 Aligned_cols=150 Identities=11% Similarity=0.055 Sum_probs=82.8
Q ss_pred EEEEEeecCCHHHHHHHHH-ccCCcccccccCCCCceEEEEeecCceeEEEEEecCCCCCCCCCCCeEEEEEEEEEcCCC
Q 006391 142 VKAVGVIDASADTVFEVVL-NLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDG 220 (647)
Q Consensus 142 ~Ka~~vVdaspe~Vfe~L~-d~~~~~R~~WD~~~~~~evVE~iD~~tDIvY~~~~p~~lp~~vs~RDFV~LRswRr~~dG 220 (647)
+..+..|++||+++|.++. |... ..+.|=+.+.+++++|-=.+.-.|.+..+.+. .+. -++.-|--..+ +.
T Consensus 5 ~~~e~~i~a~a~kvw~~~~~d~~~-~~pk~~~~i~s~~i~eG~g~~Gsir~~~~~~G-----~~~-~~~kErl~~~D-~~ 76 (157)
T 1tw0_A 5 FRDETSSSVAPAKLYKALTKDSDT-IAQKIDGPIQSIELVEGNGGVGTIKKITANEG-----DKT-SFVLQKVDAID-EA 76 (157)
T ss_dssp EEEEEEESSCHHHHHHHHHHTGGG-GGGGSCSSEEEEEEEESSSSTTCEEEEEEEET-----TEE-EEEEEEEEEEE-TT
T ss_pred EEEEEEecCCHHHHHHHHhcCcch-hhhhHHhhccEEEEEeCCCCCCeEEEEEeeCC-----Ccc-ceEEEEEEEEe-cc
Confidence 4566789999999999988 8764 36788788888888886222223555544421 110 12222221122 33
Q ss_pred eEEEEEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccEEEEEEEEcCCCccccccCcccceehhhHHHHHH
Q 006391 221 TYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFALLS 300 (647)
Q Consensus 221 sYvIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~VT~I~qvDlkGw~~w~p~~~~~~~~~~~~~mL~ 300 (647)
...+.++-++-+-.| . + + +...+-+-+.|.+. +.|.++|.+..+.+|-.. +. ....+.+...+..
T Consensus 77 ~~~~~y~iieGd~~~-~-~-~--~~~~~~~~v~~~~~------~gs~v~w~~~y~~~~~~~--~~--~~~~~~~~~~~~~ 141 (157)
T 1tw0_A 77 NLGYDYSIVGGTGLP-E-S-L--EKLSFETKVVAGSG------GGSISKVTLKFHTKGDAP--LS--DAVRDDALAKGAG 141 (157)
T ss_dssp TTEEEEEEEECTTSC-T-T-E--EEEEEEEEEEECSS------SSEEEEEEEEEEESTTCC--CC--HHHHHHHHHHHHH
T ss_pred CCEEEEEEEecCCCc-c-c-e--EEEEEEEEEEecCC------CCEEEEEEEEEEECCCCC--CC--HHHHHHHHHHHHH
Confidence 344444444433222 1 2 1 23345667778543 359999999999886541 11 1111111223344
Q ss_pred HHHHHHHHhhcCCC
Q 006391 301 QVAGLKEYIGANPA 314 (647)
Q Consensus 301 ~va~LRe~~~~~~~ 314 (647)
-..+|.+|+.++|.
T Consensus 142 ~~k~ie~yll~~p~ 155 (157)
T 1tw0_A 142 FFKAIEGYVLANPA 155 (157)
T ss_dssp HHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHhCcc
Confidence 56777788877653
No 30
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=80.12 E-value=1.6 Score=36.50 Aligned_cols=26 Identities=19% Similarity=0.449 Sum_probs=23.8
Q ss_pred cceeecccCHHHHHHHHHHHHHHHHH
Q 006391 11 KKGEIACATAGEARKWMEAFDQAKQQ 36 (647)
Q Consensus 11 ~~~~~~~~~~eea~~w~~~~~~~~~~ 36 (647)
+...|.|.|.+|+..|+++|+.|+..
T Consensus 81 r~~~l~a~s~~e~~~Wi~ai~~~i~~ 106 (108)
T 1u5d_A 81 RTYEFTATSPAEARDWVDQISFLLKD 106 (108)
T ss_dssp CCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 66889999999999999999999873
No 31
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=79.02 E-value=1.8 Score=36.80 Aligned_cols=27 Identities=7% Similarity=0.257 Sum_probs=24.8
Q ss_pred CCcceeecccCHHHHHHHHHHHHHHHH
Q 006391 9 ESKKGEIACATAGEARKWMEAFDQAKQ 35 (647)
Q Consensus 9 ~~~~~~~~~~~~eea~~w~~~~~~~~~ 35 (647)
..+...|.|.|.+|+..|+++|+.|+.
T Consensus 86 ~~~~~~l~a~s~~e~~~Wi~al~~~~~ 112 (118)
T 1v89_A 86 GQDSYVLMASSQAEMEEWVKFLRRVAG 112 (118)
T ss_dssp SCCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCHHHHHHHHHHHHHHHc
Confidence 566788999999999999999999987
No 32
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=78.22 E-value=1.4 Score=38.41 Aligned_cols=28 Identities=14% Similarity=0.240 Sum_probs=24.1
Q ss_pred CcceeecccCHHHHHHHHHHHHHHHHHH
Q 006391 10 SKKGEIACATAGEARKWMEAFDQAKQQA 37 (647)
Q Consensus 10 ~~~~~~~~~~~eea~~w~~~~~~~~~~~ 37 (647)
.....|.|.|.+|+..|+++|+.|+.+.
T Consensus 85 ~~~~~~~a~s~~e~~~Wi~al~~~~~~~ 112 (125)
T 1unq_A 85 VIERTFHVETPEEREEWTTAIQTVADGL 112 (125)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred ceeEEEEeCCHHHHHHHHHHHHHHHhhc
Confidence 3456799999999999999999999843
No 33
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=77.60 E-value=2.3 Score=36.18 Aligned_cols=28 Identities=18% Similarity=0.361 Sum_probs=24.8
Q ss_pred CcceeecccCHHHHHHHHHHHHHHHHHH
Q 006391 10 SKKGEIACATAGEARKWMEAFDQAKQQA 37 (647)
Q Consensus 10 ~~~~~~~~~~~eea~~w~~~~~~~~~~~ 37 (647)
.+...|.|.|.+|+..|+++|+.|+.+.
T Consensus 78 ~r~~~l~a~s~~e~~~Wi~ai~~~~~~~ 105 (115)
T 2dn6_A 78 DKTFEISASDKKKKQEWIQAIHSTIHLL 105 (115)
T ss_dssp SCEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 4568899999999999999999999843
No 34
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=75.10 E-value=2.3 Score=36.39 Aligned_cols=27 Identities=11% Similarity=0.198 Sum_probs=24.5
Q ss_pred CCcceeecccCHHHHHHHHHHHHHHHH
Q 006391 9 ESKKGEIACATAGEARKWMEAFDQAKQ 35 (647)
Q Consensus 9 ~~~~~~~~~~~~eea~~w~~~~~~~~~ 35 (647)
..+...|.|.|.+|+..|+++|+.|+.
T Consensus 73 ~~r~~~l~a~s~~e~~~Wi~~l~~~~~ 99 (115)
T 2cod_A 73 TQRTFVFRVEKEEERNDWISILLNALK 99 (115)
T ss_dssp SSCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 456788999999999999999999986
No 35
>3kl1_A PYL2, putative uncharacterized protein AT2G26040; abscisic acid receptor, crystal, high resolution, PP2C, HORM receptor; 1.55A {Arabidopsis thaliana} PDB: 3kdi_A* 3kdh_A 3nr4_A* 3ns2_A* 3nj0_A* 3nj1_A* 3nmh_A* 3kaz_A 3kb0_A* 3kb3_A* 3ujl_A* 3nmp_A* 3nmt_A* 3nmv_A*
Probab=74.39 E-value=40 Score=32.43 Aligned_cols=116 Identities=11% Similarity=0.034 Sum_probs=64.7
Q ss_pred EeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCceeEEEEEecCCCCCCCCCCCeEEEEEEEEE-cCCCeEEE
Q 006391 146 GVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFR-GQDGTYTI 224 (647)
Q Consensus 146 ~vVdaspe~Vfe~L~d~~~~~R~~WD~~~~~~evVE~iD~~tDIvY~~~~p~~lp~~vs~RDFV~LRswRr-~~dGsYvI 224 (647)
..|++|+++++.++.|... -..|=+.+.++++++-=++--.|-+..+... .| +-.++..-. .++..+.+
T Consensus 41 ~~I~Apa~~vW~lv~df~~--~~~w~p~I~s~e~~eGdg~vGsVR~~t~~~G-~p-------~~~vkErL~~iD~~~~~~ 110 (190)
T 3kl1_A 41 QRIHAPASVVWPLIRRFDN--PERYKHFVKRCRLISGDGDVGSVREVTVISG-LP-------ASTSTERLEFVDDDHRVL 110 (190)
T ss_dssp EEESSCHHHHHHHHHCTTC--GGGTCSSEEEEEEEESSSSTTCEEEEEECSS-SS-------CEEEEEEEEEEETTTTEE
T ss_pred EEecCCHHHHHHHHhCCCC--hhHcccccCEEEEEcCCCCCCeEEEEEecCC-Cc-------cceEEEEEEEEeccCCEE
Confidence 4799999999999999865 5689889999988764332234655555432 11 223333221 12222222
Q ss_pred EEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccEEEEEEEEc-CCCcc
Q 006391 225 LQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIH-SSGWC 280 (647)
Q Consensus 225 a~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~VT~I~qvD-lkGw~ 280 (647)
.++=++- .. |... .++.+ .+.|..+.+ .+.++|.|+|....| +.|+.
T Consensus 111 sY~iieG-~~-~~~~-Y~s~~-----~v~~~~~~~-~~~~gt~V~Ws~~f~~p~g~~ 158 (190)
T 3kl1_A 111 SFRVVGG-EH-RLKN-YKSVT-----SVNEFLNQD-SGKVYTVVLESYTVDIPEGNT 158 (190)
T ss_dssp EEEEEEE-SS-SCCS-CEEEE-----EEEEEEC-C-CCCEEEEEEEEEEEECCTTCC
T ss_pred EEEEEec-CC-cccc-EEEEE-----EEEeccccc-CCCCcEEEEEEEEEEcCCCCC
Confidence 2222221 12 2333 23333 234442100 123689999999999 88887
No 36
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=74.16 E-value=2.1 Score=39.10 Aligned_cols=33 Identities=30% Similarity=0.591 Sum_probs=27.0
Q ss_pred CeeecCCC-----CCcceeecccCHHHHHHHHHHHHHH
Q 006391 1 MRLYNRLD-----ESKKGEIACATAGEARKWMEAFDQA 33 (647)
Q Consensus 1 ~~~yn~~~-----~~~~~~~~~~~~eea~~w~~~~~~~ 33 (647)
|.|||... ..++.+|+|.|.||...|+.||..|
T Consensus 78 F~l~~~d~r~v~~~h~~y~LsA~t~ee~~~Wi~s~~ra 115 (125)
T 1dyn_A 78 FALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLRA 115 (125)
T ss_dssp EEEEETTSSCSSTTCSSEEEEESSHHHHHHHHHHHHHT
T ss_pred EEEECCCCccccccceEEEEeCCCHHHHHHHHHHHHhC
Confidence 56777532 3468999999999999999999877
No 37
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.16 E-value=2.8 Score=36.50 Aligned_cols=27 Identities=15% Similarity=0.270 Sum_probs=24.1
Q ss_pred CcceeecccCHHHHHHHHHHHHHHHHH
Q 006391 10 SKKGEIACATAGEARKWMEAFDQAKQQ 36 (647)
Q Consensus 10 ~~~~~~~~~~~eea~~w~~~~~~~~~~ 36 (647)
.+...|.|.|.+|+..|+++|+.|+.+
T Consensus 79 ~r~~~l~a~s~~e~~~Wi~al~~~~~~ 105 (119)
T 2dhk_A 79 SRVITLKAATKQAMLYWLQQLQMKRWE 105 (119)
T ss_dssp SCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 566789999999999999999999873
No 38
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=74.02 E-value=2.7 Score=36.30 Aligned_cols=28 Identities=18% Similarity=0.278 Sum_probs=25.0
Q ss_pred CCcceeecccCHHHHHHHHHHHHHHHHH
Q 006391 9 ESKKGEIACATAGEARKWMEAFDQAKQQ 36 (647)
Q Consensus 9 ~~~~~~~~~~~~eea~~w~~~~~~~~~~ 36 (647)
..+...|.|.|.+|+..|+++|+.|+..
T Consensus 85 ~~r~~~l~a~s~~e~~~W~~al~~~i~~ 112 (125)
T 1eaz_A 85 TSRTFYVQADSPEEMHSWIKAVSGAIVA 112 (125)
T ss_dssp SSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 3567899999999999999999999983
No 39
>2qim_A PR10.2B; trans-zeatin, cytokinin, plant hormones, plant protein, PR-1 protein, pathogenesis-related protein, allergen; HET: ZEA; 1.35A {Lupinus luteus} PDB: 3e85_A* 1xdf_A* 2k7h_A
Probab=73.94 E-value=52 Score=30.18 Aligned_cols=150 Identities=9% Similarity=0.017 Sum_probs=83.1
Q ss_pred EEEEEEeecCCHHHHHHHHH-ccCCcccccccCCCCceEEEEeecC-ceeEEEEEecCCCCCCCCCCCeEEEEEEEEEcC
Q 006391 141 LVKAVGVIDASADTVFEVVL-NLERHQRYEWDMLTGDLELVDSYDG-HYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQ 218 (647)
Q Consensus 141 ~~Ka~~vVdaspe~Vfe~L~-d~~~~~R~~WD~~~~~~evVE~iD~-~tDIvY~~~~p~~lp~~vs~RDFV~LRswRr~~ 218 (647)
.+..+..|++||+++|.++. |... ..+.|=..+.+++++|- |+ .-.|.+..+.+. .+. -++.-|--..+
T Consensus 5 ~~~~e~~i~a~a~kvw~~~~~d~~~-~~pk~~~~i~s~~i~eG-dgg~Gsir~~~~~~g-----~~~-~~~kErl~~~D- 75 (158)
T 2qim_A 5 TFQDEYTSTIAPAKLYKALVTDADI-IIPKAVETIQSVEIVEG-NGGPGTIKKLTFIEG-----GES-KYVLHKIEAID- 75 (158)
T ss_dssp EEEEEEEESSCHHHHHHHHTTTHHH-HHHHHCTTEEEEEEEES-SSSTTCEEEEEEEET-----TEE-EEEEEEEEEEE-
T ss_pred EEEEEEEecCCHHHHHHHHhcCccc-hhhhHHhhCcEEEEEec-CCCCCeEEEEEEcCC-----Ccc-eeEEEEEEEEe-
Confidence 35566789999999999998 7753 35777788888888886 32 223555544321 110 12222211122
Q ss_pred CCeEEEEEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccEEEEEEEEcCCCccccccCcccceehhhHHHH
Q 006391 219 DGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFAL 298 (647)
Q Consensus 219 dGsYvIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~VT~I~qvDlkGw~~w~p~~~~~~~~~~~~~m 298 (647)
+....+.++-++-+-.| . + + +...+-+-+.|.+. +.|.++|.+..+.+|-.. +. ....+.+...+
T Consensus 76 ~~~~~~~y~iieG~~~~-~-~-~--~~~~~~~~v~~~~~------~gs~v~wt~~y~~~~~~~--~~--~~~~~~~~~~~ 140 (158)
T 2qim_A 76 EANLGYNYSIVGGVGLP-D-T-I--EKISFETKLVEGAN------GGSIGKVTIKIETKGDAQ--PN--EEEGKAAKARG 140 (158)
T ss_dssp GGGTEEEEEEEEESSCC-C-S-E--EEEEEEEEEEECST------TCEEEEEEEEEEESTTCC--CC--HHHHHHHHHHH
T ss_pred cCCCEEEEEEEeccCCc-c-c-e--EEEEEEEEEEecCC------CCEEEEEEEEEEECCCCC--CC--HHHHHHHHHHH
Confidence 22344444444333211 0 1 1 23345667778543 359999999999886541 11 11111112233
Q ss_pred HHHHHHHHHHhhcCCC
Q 006391 299 LSQVAGLKEYIGANPA 314 (647)
Q Consensus 299 L~~va~LRe~~~~~~~ 314 (647)
..-..+|.+|+.++|.
T Consensus 141 ~~~~k~ie~yll~~p~ 156 (158)
T 2qim_A 141 DAFFKAIESYLSAHPD 156 (158)
T ss_dssp HHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHhCcC
Confidence 4556778888888765
No 40
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=73.88 E-value=2.7 Score=35.80 Aligned_cols=27 Identities=15% Similarity=0.233 Sum_probs=24.1
Q ss_pred CcceeecccCHHHHHHHHHHHHHHHHH
Q 006391 10 SKKGEIACATAGEARKWMEAFDQAKQQ 36 (647)
Q Consensus 10 ~~~~~~~~~~~eea~~w~~~~~~~~~~ 36 (647)
.+...|.|.|.+|+..|+++|+.|+..
T Consensus 76 ~r~~~l~a~s~~e~~~Wi~ai~~~~~~ 102 (113)
T 1pls_A 76 QQDHFFQAAFLEERDAWVRDINKAIKC 102 (113)
T ss_dssp TEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 356789999999999999999999883
No 41
>3rt2_A Abscisic acid receptor PYL10; ABA-independent PP2C inhibitor, PP2CS, hydrolase inhibitor; 1.50A {Arabidopsis thaliana} PDB: 3r6p_A* 3qtj_A* 3uqh_A 3rt0_C
Probab=73.66 E-value=47 Score=31.80 Aligned_cols=139 Identities=15% Similarity=0.104 Sum_probs=74.0
Q ss_pred EEeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCce-eEEEEEecCCCCCCCCCCCeEEEEEEEEEcCCC---
Q 006391 145 VGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHY-DVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDG--- 220 (647)
Q Consensus 145 ~~vVdaspe~Vfe~L~d~~~~~R~~WD~~~~~~evVE~iD~~t-DIvY~~~~p~~lp~~vs~RDFV~LRswRr~~dG--- 220 (647)
...|+|||++||.+|.|... -+.|-+.+.++ +++--++.. .|-+..+... +| --++.=|--..++..
T Consensus 32 ~~~I~Apa~~VW~~v~df~~--l~~w~P~V~s~-~~eG~~ggvGsvR~lt~~~G-~p-----~~~vkErL~~~D~~~~~~ 102 (183)
T 3rt2_A 32 VKHIKAPLHLVWSIVRRFDE--PQKYKPFISRC-VVQGKKLEVGSVREVDLKSG-LP-----ATKSTEVLEILDDNEHIL 102 (183)
T ss_dssp EEEESSCHHHHHHHHTCTTC--GGGTCTTEEEE-EESSSCCCTTCEEEEEECCS-ST-----TCEEEEEEEEEETTTTEE
T ss_pred EEEEeCCHHHHHHHHhCcCc--hhhcCccceEE-EeeCCCCCCCcEEEEEeCCC-Cc-----cceEEEEEEEEECCCCEE
Confidence 34799999999999999875 57899988877 443211111 2444444432 11 123332222233332
Q ss_pred eEEEEEeeccCCCCCCCCCeeeEEEcceeEEEEecC-CCCCCCCCccEEEEEEEEc-CCCccccccCcccceehhhHHHH
Q 006391 221 TYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLN-LPMGSNGAKCLVTQMLEIH-SSGWCRWKKNSSTKFEKTTHFAL 298 (647)
Q Consensus 221 sYvIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~-~~~~~~~~~~~VT~I~qvD-lkGw~~w~p~~~~~~~~~~~~~m 298 (647)
+|.|..- ..| -+.| .+-+-+.|.+ . |.++|.|+|....| +.|+. ..-...|...+...=
T Consensus 103 sY~Iieg-----~lp-~~~y------~ati~v~p~~~d----G~~gt~V~Ws~~fd~~~g~~---~e~~~~~~~~i~~~~ 163 (183)
T 3rt2_A 103 GIRIVGG-----DHR-LKNY------SSTISLHSETID----GKTGTLAIESFVVDVPEGNT---KEETCFFVEALIQCN 163 (183)
T ss_dssp EEEEEEE-----SCS-CTTC------EEEEEEEEEEET----TEEEEEEEEEEEEECCTTCC---HHHHHHHHHHHHHHH
T ss_pred EEEEecC-----Ccc-eeEE------EEEEEEEEecCC----CCCCEEEEEEEEEEcCCCCC---HHHHHHHHHHHHHHH
Confidence 3444432 222 3343 3455567765 3 21279999999999 56775 221122333333333
Q ss_pred HHHHHHHHHHhhc
Q 006391 299 LSQVAGLKEYIGA 311 (647)
Q Consensus 299 L~~va~LRe~~~~ 311 (647)
|..++..-|-+..
T Consensus 164 L~~L~~~~e~~~~ 176 (183)
T 3rt2_A 164 LNSLADVTERLQA 176 (183)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 4555555555443
No 42
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=71.10 E-value=4.5 Score=36.36 Aligned_cols=25 Identities=16% Similarity=0.306 Sum_probs=23.6
Q ss_pred cceeecccCHHHHHHHHHHHHHHHH
Q 006391 11 KKGEIACATAGEARKWMEAFDQAKQ 35 (647)
Q Consensus 11 ~~~~~~~~~~eea~~w~~~~~~~~~ 35 (647)
+...|.|.|.+|+..|+.+|+.|+.
T Consensus 100 r~~~l~A~s~~e~~~Wi~al~~ai~ 124 (150)
T 1wg7_A 100 SSYLLAADSEVEMEEWITILNKILQ 124 (150)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred cEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 5788999999999999999999998
No 43
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=68.25 E-value=3.3 Score=35.04 Aligned_cols=25 Identities=16% Similarity=0.353 Sum_probs=22.5
Q ss_pred cceeecccCHHHHHHHHHHHHHHHH
Q 006391 11 KKGEIACATAGEARKWMEAFDQAKQ 35 (647)
Q Consensus 11 ~~~~~~~~~~eea~~w~~~~~~~~~ 35 (647)
+...|.|.|.+|+..|+++|+.|+.
T Consensus 79 ~~~~~~a~s~~e~~~Wi~al~~a~~ 103 (109)
T 1wgq_A 79 VFYVFKADDAHSTQRWIDAFQEGTV 103 (109)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHS
T ss_pred eEEEEECCCHHHHHHHHHHHHHHhc
Confidence 3478999999999999999999976
No 44
>1icx_A Protein LLR18A, LLPR10.1A; 7-stranded beta sheet, C-terminal helix, allergen; 1.95A {Lupinus luteus} SCOP: d.129.3.1 PDB: 1ifv_A
Probab=67.83 E-value=42 Score=30.71 Aligned_cols=149 Identities=9% Similarity=0.010 Sum_probs=81.3
Q ss_pred EEEEEeecCCHHHHHHHHH-ccCCcccccccCCCCceEEEEeecCceeEEEEEecCCCCCCCCCCCeEEEEEEEEEcCCC
Q 006391 142 VKAVGVIDASADTVFEVVL-NLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDG 220 (647)
Q Consensus 142 ~Ka~~vVdaspe~Vfe~L~-d~~~~~R~~WD~~~~~~evVE~iD~~tDIvY~~~~p~~lp~~vs~RDFV~LRswRr~~dG 220 (647)
+..+..|++||+++|.++. |... ..+.|=+.+.+++++|-=.+.-.|.+..+.+. .+. -++.-|--..+ +.
T Consensus 5 ~~~e~~i~a~a~kvw~~~~~d~~~-~~pk~~~~i~s~~i~eG~g~~Gsir~~~~~~G-----~~~-~~~kErl~~~D-~~ 76 (155)
T 1icx_A 5 FENEQSSTVAPAKLYKALTKDSDE-IVPKVIEPIQSVEIVEGNGGPGTIKKIIAIHD-----GHT-SFVLHKLDAID-EA 76 (155)
T ss_dssp EEEEEEESSCHHHHHHHHTTTHHH-HHHHHSTTEEEEEEEESSSSTTCEEEEEEESS-----SSE-EEEEEEEEEEE-GG
T ss_pred EEEEEEecCCHHHHHHHHhcCcch-hcchhhhhccEEEEEecCCCCCeEEEEEEecC-----Ccc-eeEEEEEEEEe-cc
Confidence 4566789999999999988 7753 35777788888898886222223555554421 111 12222222122 22
Q ss_pred eEEEEEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccEEEEEEEEcCCCccccccCcccceehhhHHHHHH
Q 006391 221 TYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFALLS 300 (647)
Q Consensus 221 sYvIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~VT~I~qvDlkGw~~w~p~~~~~~~~~~~~~mL~ 300 (647)
...+.++-++-+-.| . + + +...+-+-+.|.+. +.|.++|.+..+.+|-. +. ....+.+...+..
T Consensus 77 ~~~~~y~iieGd~~~-~-~-~--~~~~~~~~v~~~~~------~gs~v~w~~~y~~~~~~---~~--~~~~~~~~~~~~~ 140 (155)
T 1icx_A 77 NLTYNYSIIGGEGLD-E-S-L--EKISYESKILPGPD------GGSIGKINVKFHTKGDV---LS--ETVRDQAKFKGLG 140 (155)
T ss_dssp GTEEEEEEEEETTSC-T-T-E--EEEEEEEEEEECGG------GCEEEEEEEEEEESSSS---CC--HHHHTTHHHHHHH
T ss_pred CCEEEEEEEecCCCc-c-c-e--EEEEEEEEEEecCC------CCEEEEEEEEEEECCCC---CC--HHHHHHHHHHHHH
Confidence 333444444333211 1 2 1 23345666777543 35999999999988654 21 1001111122334
Q ss_pred HHHHHHHHhhcCCC
Q 006391 301 QVAGLKEYIGANPA 314 (647)
Q Consensus 301 ~va~LRe~~~~~~~ 314 (647)
-+.+|.+|+-++|.
T Consensus 141 ~~k~ie~yll~~p~ 154 (155)
T 1icx_A 141 LFKAIEGYVLAHPD 154 (155)
T ss_dssp HHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHhCCC
Confidence 56777888877753
No 45
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=67.60 E-value=5 Score=34.47 Aligned_cols=26 Identities=23% Similarity=0.436 Sum_probs=23.7
Q ss_pred CcceeecccCHHHHHHHHHHHHHHHH
Q 006391 10 SKKGEIACATAGEARKWMEAFDQAKQ 35 (647)
Q Consensus 10 ~~~~~~~~~~~eea~~w~~~~~~~~~ 35 (647)
.+...|.|.|.+|+..|+++|+.|+.
T Consensus 84 ~r~~~l~a~s~~e~~~Wi~al~~a~~ 109 (123)
T 1upq_A 84 MRTYVLAADTLEDLRGWLRALGRASR 109 (123)
T ss_dssp SCCEEEECSSHHHHHHHHHHHHHHHC
T ss_pred CeEEEEECCCHHHHHHHHHHHHHHHh
Confidence 36788999999999999999999986
No 46
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=66.05 E-value=3 Score=35.38 Aligned_cols=26 Identities=8% Similarity=0.265 Sum_probs=22.6
Q ss_pred CcceeecccCHHHHHHHHHHHHHHHH
Q 006391 10 SKKGEIACATAGEARKWMEAFDQAKQ 35 (647)
Q Consensus 10 ~~~~~~~~~~~eea~~w~~~~~~~~~ 35 (647)
.+...|.|.|.+|+..|+++|+.|+.
T Consensus 76 ~r~~~l~A~s~~e~~~Wi~al~~~~~ 101 (107)
T 2cof_A 76 EELAKLEAKSSEEMGHWLGLLLSESG 101 (107)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHSS
T ss_pred CeEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 44578999999999999999998854
No 47
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=65.62 E-value=3.6 Score=36.28 Aligned_cols=25 Identities=16% Similarity=0.406 Sum_probs=22.0
Q ss_pred cceeecccCHHHHHHHHHHHHHHHH
Q 006391 11 KKGEIACATAGEARKWMEAFDQAKQ 35 (647)
Q Consensus 11 ~~~~~~~~~~eea~~w~~~~~~~~~ 35 (647)
+-..|+|.|.|++.+|+++|+.|+.
T Consensus 82 ~~y~f~A~s~e~~~~Wl~al~~A~~ 106 (112)
T 2coc_A 82 QSWYLSASSAELQQQWLETLSTAAH 106 (112)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHS
T ss_pred eEEEEEcCCHHHHHHHHHHHHHHhc
Confidence 3468999999999999999999864
No 48
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=65.27 E-value=1.8 Score=35.81 Aligned_cols=24 Identities=13% Similarity=0.353 Sum_probs=21.6
Q ss_pred CcceeecccCHHHHHHHHHHHHHH
Q 006391 10 SKKGEIACATAGEARKWMEAFDQA 33 (647)
Q Consensus 10 ~~~~~~~~~~~eea~~w~~~~~~~ 33 (647)
++...|.|.|.+|+..|+++|++|
T Consensus 69 ~r~~~l~A~s~~e~~~Wi~aLq~A 92 (94)
T 2rsg_A 69 DSVWYLRAQDPDHRQQWIDAIEQH 92 (94)
T ss_dssp TEEEEEECCSSCCTHHHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHHHhh
Confidence 456789999999999999999987
No 49
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=65.06 E-value=4.8 Score=35.64 Aligned_cols=25 Identities=20% Similarity=0.349 Sum_probs=22.8
Q ss_pred cceeecccCHHHHHHHHHHHHHHHH
Q 006391 11 KKGEIACATAGEARKWMEAFDQAKQ 35 (647)
Q Consensus 11 ~~~~~~~~~~eea~~w~~~~~~~~~ 35 (647)
+...|.|.|.+|+..|+++|+.|+.
T Consensus 90 r~~~l~A~s~~e~~~Wi~al~~a~~ 114 (130)
T 2d9v_A 90 SRLHLCAETRDDAIAWKTALMEANS 114 (130)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred CEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 4578999999999999999999976
No 50
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=62.82 E-value=5.4 Score=34.48 Aligned_cols=26 Identities=23% Similarity=0.252 Sum_probs=23.5
Q ss_pred CcceeecccCHHHHHHHHHHHHHHHH
Q 006391 10 SKKGEIACATAGEARKWMEAFDQAKQ 35 (647)
Q Consensus 10 ~~~~~~~~~~~eea~~w~~~~~~~~~ 35 (647)
.+...|.|.|.+|+..|+++|++|+.
T Consensus 94 ~r~~~l~a~s~~e~~~Wi~al~~a~~ 119 (128)
T 2dkp_A 94 MRTYYFCTDTGKEMELWMKAMLDAAL 119 (128)
T ss_dssp SCCEEEECSSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 46788999999999999999999976
No 51
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=61.61 E-value=3.2 Score=35.35 Aligned_cols=26 Identities=8% Similarity=0.286 Sum_probs=23.1
Q ss_pred CcceeecccCHHHHHHHHHHHHHHHH
Q 006391 10 SKKGEIACATAGEARKWMEAFDQAKQ 35 (647)
Q Consensus 10 ~~~~~~~~~~~eea~~w~~~~~~~~~ 35 (647)
.+...|.|.|.+|+..|+++|+.|+.
T Consensus 86 ~r~~~l~a~s~~e~~~Wi~al~~~i~ 111 (117)
T 1v5u_A 86 RRVYNFCAQDVPSAQQWVDRIQSCLS 111 (117)
T ss_dssp SCEEEEECSSHHHHHHHHHHHHTTCC
T ss_pred CceEEEECCCHHHHHHHHHHHHHHhc
Confidence 45678999999999999999999976
No 52
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=61.55 E-value=4.2 Score=34.57 Aligned_cols=27 Identities=15% Similarity=0.345 Sum_probs=23.9
Q ss_pred CCcceeecccCHHHHHHHHHHHHHHHH
Q 006391 9 ESKKGEIACATAGEARKWMEAFDQAKQ 35 (647)
Q Consensus 9 ~~~~~~~~~~~~eea~~w~~~~~~~~~ 35 (647)
..+...|.|.|.+|+..|+++|+.|+.
T Consensus 83 ~~r~~~l~a~s~~e~~~Wi~al~~~~~ 109 (117)
T 2d9y_A 83 GVRTYFFSAESPEEQEAWIQAMGEAAR 109 (117)
T ss_dssp SSCEEEEECSSHHHHHHHHHHHHHTTC
T ss_pred CCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 346688999999999999999999976
No 53
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=60.87 E-value=6.2 Score=35.82 Aligned_cols=34 Identities=21% Similarity=0.276 Sum_probs=28.1
Q ss_pred CeeecCCCCCcceeecccCHHHHHHHHHHHHHHHH
Q 006391 1 MRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 35 (647)
Q Consensus 1 ~~~yn~~~~~~~~~~~~~~~eea~~w~~~~~~~~~ 35 (647)
|.|+|. +..+.-.|.|.|.+|+..|+.+|..|+.
T Consensus 79 F~L~~~-~~G~~Y~fqA~s~~~~~~W~~ai~~a~~ 112 (126)
T 2dtc_A 79 FQLNNP-DKGNVYKFQTGSRFHAILWHKHLDDACK 112 (126)
T ss_dssp EEEECT-TSCSEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEeeC-CCCCEEEEeCCCHHHHHHHHHHHHHHHh
Confidence 567754 2345689999999999999999999987
No 54
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=60.21 E-value=3.5 Score=34.48 Aligned_cols=26 Identities=19% Similarity=0.406 Sum_probs=23.2
Q ss_pred CcceeecccCHHHHHHHHHHHHHHHH
Q 006391 10 SKKGEIACATAGEARKWMEAFDQAKQ 35 (647)
Q Consensus 10 ~~~~~~~~~~~eea~~w~~~~~~~~~ 35 (647)
.+...|.|.|.+|...|+++|+.|+.
T Consensus 68 ~r~~~l~a~s~~e~~~Wi~al~~a~~ 93 (103)
T 3rcp_A 68 EQHFYMKAVNAAERQRWLVALGSSKA 93 (103)
T ss_dssp TEEEEEECSSHHHHHHHHHHHHTTSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHHHHH
Confidence 45778999999999999999999965
No 55
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=59.05 E-value=6.9 Score=34.01 Aligned_cols=24 Identities=25% Similarity=0.405 Sum_probs=22.4
Q ss_pred ceeecccCHHHHHHHHHHHHHHHH
Q 006391 12 KGEIACATAGEARKWMEAFDQAKQ 35 (647)
Q Consensus 12 ~~~~~~~~~eea~~w~~~~~~~~~ 35 (647)
...|.|.|.+|+..|+++|+.|+.
T Consensus 97 ~~~l~a~s~~e~~~Wi~al~~~~~ 120 (129)
T 1x05_A 97 HYFLQAATPKERTEWIKAIQMASR 120 (129)
T ss_dssp CCEEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHHHHHHH
Confidence 478999999999999999999987
No 56
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=58.59 E-value=5.4 Score=36.66 Aligned_cols=25 Identities=4% Similarity=0.239 Sum_probs=23.1
Q ss_pred cceeecccCHHHHHHHHHHHHHHHH
Q 006391 11 KKGEIACATAGEARKWMEAFDQAKQ 35 (647)
Q Consensus 11 ~~~~~~~~~~eea~~w~~~~~~~~~ 35 (647)
+...|.|.|.+|+..|+++|+.|+.
T Consensus 87 r~~~l~A~s~~e~~~Wi~ai~~~~~ 111 (168)
T 2j59_M 87 CECLFQAEDRDDMLAWIKTIQESSN 111 (168)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred ceEEEEcCCHHHHHHHHHHHHHHHh
Confidence 5678999999999999999999986
No 57
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=57.46 E-value=7.2 Score=36.25 Aligned_cols=26 Identities=8% Similarity=0.202 Sum_probs=23.4
Q ss_pred CcceeecccCHHHHHHHHHHHHHHHH
Q 006391 10 SKKGEIACATAGEARKWMEAFDQAKQ 35 (647)
Q Consensus 10 ~~~~~~~~~~~eea~~w~~~~~~~~~ 35 (647)
.+..-|.|.|.+|+..|+++|+++|.
T Consensus 96 ~rt~~l~A~s~~e~~~Wi~aL~~~i~ 121 (164)
T 2lul_A 96 ANTLYIFAPSPQSRDLWVKKLKEEIK 121 (164)
T ss_dssp SCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred CcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 35577999999999999999999988
No 58
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=55.38 E-value=6.9 Score=35.14 Aligned_cols=25 Identities=16% Similarity=0.364 Sum_probs=23.2
Q ss_pred cceeecccCHHHHHHHHHHHHHHHH
Q 006391 11 KKGEIACATAGEARKWMEAFDQAKQ 35 (647)
Q Consensus 11 ~~~~~~~~~~eea~~w~~~~~~~~~ 35 (647)
+...|.|.|.+|+..|+++|+.|+.
T Consensus 95 r~~~l~a~s~~e~~~Wi~al~~~i~ 119 (148)
T 1u5f_A 95 RIYQFTAASPKDAEEWVQQLKFILQ 119 (148)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred cEEEEECCCHHHHHHHHHHHHHHHH
Confidence 5678999999999999999999987
No 59
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=54.44 E-value=9.8 Score=32.91 Aligned_cols=25 Identities=16% Similarity=0.288 Sum_probs=23.1
Q ss_pred cceeecccCHHHHHHHHHHHHHHHH
Q 006391 11 KKGEIACATAGEARKWMEAFDQAKQ 35 (647)
Q Consensus 11 ~~~~~~~~~~eea~~w~~~~~~~~~ 35 (647)
+...|.|.|.+|+..|+++|+.|+.
T Consensus 93 ~~~~f~A~s~~e~~~Wi~ai~~~~~ 117 (123)
T 1wjm_A 93 KEYLFQAKDEAEMSSWLRVVNAAIA 117 (123)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHHHHHh
Confidence 5678999999999999999999987
No 60
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=54.40 E-value=9.7 Score=32.86 Aligned_cols=25 Identities=24% Similarity=0.368 Sum_probs=22.5
Q ss_pred cceeecccCHHHHHHHHHHHHHHHH
Q 006391 11 KKGEIACATAGEARKWMEAFDQAKQ 35 (647)
Q Consensus 11 ~~~~~~~~~~eea~~w~~~~~~~~~ 35 (647)
...-|.|.|.||+..|+++|..|+.
T Consensus 77 ~~y~f~A~s~ee~~~Wi~ai~~~~~ 101 (112)
T 3cxb_B 77 PCLELSAESEAEMAEWMQHLCQAVS 101 (112)
T ss_dssp CCEEEECSSHHHHHHHHHHHHHHHT
T ss_pred CEEEEEcCCHHHHHHHHHHHHHHhh
Confidence 3567999999999999999999987
No 61
>3jrs_A PYL1, putative uncharacterized protein AT5G46790; plant hormone receptor, abscisic acid, hormone recepto; HET: A8S; 2.05A {Arabidopsis thaliana}
Probab=52.57 E-value=56 Score=32.02 Aligned_cols=139 Identities=12% Similarity=0.059 Sum_probs=70.0
Q ss_pred EeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCce-eEEEEEecCCCCCCCCCCCeEEEEEEEEEcCCCeEEE
Q 006391 146 GVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHY-DVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDGTYTI 224 (647)
Q Consensus 146 ~vVdaspe~Vfe~L~d~~~~~R~~WD~~~~~~evVE~iD~~t-DIvY~~~~p~~lp~~vs~RDFV~LRswRr~~dGsYvI 224 (647)
..|+|||++|+.+|.|... -+.|=+.+.+|++++--++.. .|-+..+... +| -..+.=|--..++.. ..+
T Consensus 60 ~~I~ApadkVW~lv~Df~~--l~~w~p~V~s~e~~eGd~g~vGsVR~lt~~~G-~p-----~~~vkErL~~lDde~-~~~ 130 (208)
T 3jrs_A 60 QRIHAPPETVWSVVRRFDR--PQIYKHFIKSCNVSEDFEMRVGCTRDVNVISG-LP-----ANTSRERLDLLDDDR-RVT 130 (208)
T ss_dssp EEESSCHHHHHHHHTCTTC--GGGTCTTEEEEECCTTCCCSTTCEEEEEECTT-SS-----CCEEEEEEEEEETTT-TEE
T ss_pred EEEeCCHHHHHHHHhCcCC--hhHccccceEEEEecCCCCCCCeEEEEEecCC-Cc-----cceEEEEEEEEeccC-CEE
Confidence 4699999999999999876 578998877777654221111 2444444321 11 123322222223322 222
Q ss_pred EEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccEEEEEEEEc------CCCccccccCcccceehhhHHHH
Q 006391 225 LQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIH------SSGWCRWKKNSSTKFEKTTHFAL 298 (647)
Q Consensus 225 a~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~VT~I~qvD------lkGw~~w~p~~~~~~~~~~~~~m 298 (647)
.++=++ .. .|.++|. +-.-+.|... .++|.|+|..... +.|+. ..-...|-..+ .
T Consensus 131 sYsIie-G~-lpv~~Y~------sti~V~p~~~-----g~~t~V~Wt~~fes~~~D~p~g~~---~e~a~~~~~~v---y 191 (208)
T 3jrs_A 131 GFSITG-GE-HRLRNYK------SVTTVHRFEK-----EEEEERIWTVVLESYVVDVPEGNS---EEDTRLFADTV---I 191 (208)
T ss_dssp EEEEEE-SS-SSCTTCE------EEEEEEEEEC----------CEEEEEEEEEEEECCTTSC---HHHHHHHHHHH---H
T ss_pred EEEEee-CC-cceeeEE------EEEEEEEccC-----CCccEEEEEEEEEEccCCCCCCCC---HHHHHHHHHHH---H
Confidence 222222 12 2355664 3455677643 2579999998887 66776 11011111111 2
Q ss_pred HHHHHHHHHHhhcC
Q 006391 299 LSQVAGLKEYIGAN 312 (647)
Q Consensus 299 L~~va~LRe~~~~~ 312 (647)
-+-+++|++.++..
T Consensus 192 ~~gL~~L~~~~e~~ 205 (208)
T 3jrs_A 192 RLNLQKLASITEAM 205 (208)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhh
Confidence 35667777666543
No 62
>2flh_A Cytokinin-specific binding protein; zeatin, pathogenesis-related proteins, multiple- ligand binding, plant protein; HET: ZEA; 1.20A {Vigna radiata} PDB: 3c0v_A*
Probab=50.87 E-value=1.5e+02 Score=27.09 Aligned_cols=145 Identities=11% Similarity=0.067 Sum_probs=76.2
Q ss_pred EEEEEEeecCCHHHHHHH-HHccCCcccccccCCC-CceEEEEeecCceeEEEEEecCCCCCCCCCCCeEEEEEEEEEcC
Q 006391 141 LVKAVGVIDASADTVFEV-VLNLERHQRYEWDMLT-GDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQ 218 (647)
Q Consensus 141 ~~Ka~~vVdaspe~Vfe~-L~d~~~~~R~~WD~~~-~~~evVE~iD~~tDIvY~~~~p~~lp~~vs~RDFV~LRswRr~~ 218 (647)
.+..+..+++||++||.. +.|... .++.|-+.+ .+++++|-=++.-.|.+..+.+ ..++ -++.=|--..++
T Consensus 4 ~~~~e~~i~a~a~kvw~~~v~d~~~-l~pk~~P~~i~s~~~~eGdgg~Gsvr~~~~~~-----g~~~-~~~kErl~~iD~ 76 (155)
T 2flh_A 4 EFNTQTELSVRLEALWAVLSKDFIT-VVPKVLPHIVKDVQLIEGDGGVGTILIFNFLP-----EVSP-SYQREEITEFDE 76 (155)
T ss_dssp EEEEEEEESSCHHHHHHHHHTSCTT-HHHHHCTTTEEEEEEEECSSSTTCEEEEEECT-----TSSS-CEEEEEEEEEET
T ss_pred EEEEEEEecCCHHHHHHHHhccccc-ccchhccccceEEEEEcCCCCCCeEEEEEeeC-----CCCC-cEEEEEEEEEeC
Confidence 355677899999999999 688765 358999755 6678777532222355555443 1133 355444433443
Q ss_pred CC---eEEEEEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccEEEEEEEEcCCCccccccCcccceehhhH
Q 006391 219 DG---TYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTH 295 (647)
Q Consensus 219 dG---sYvIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~VT~I~qvDlkGw~~w~p~~~~~~~~~~~ 295 (647)
.. +|.|..-.+- ..|-+. ..+-+-+.|.++ +.|.++|.+..+.+|-.. +. .....+ .
T Consensus 77 ~~~~~~y~iieg~~l---~~~~~~------~~~~i~v~p~~~------ggs~v~wt~~y~~~~~~~--~~--~~~~~~-~ 136 (155)
T 2flh_A 77 SSHEIGLQVIEGGYL---SQGLSY------YKTTFKLSEIEE------DKTLVNVKISYDHDSDIE--EK--VTPTKT-S 136 (155)
T ss_dssp TTTEEEEEEEEEGGG---GTTCSE------EEEEEEEEEEET------TEEEEEEEEEEEC-----------CCHHHH-H
T ss_pred CCCEEEEEEEecccc---ccCceE------EEEEEEEEECCC------CCEEEEEEEEEEECCCCc--cC--hhHhhh-H
Confidence 33 3444433321 012222 234455667543 469999999999887541 21 111110 0
Q ss_pred HHHHHHHHHHHHHhhcC
Q 006391 296 FALLSQVAGLKEYIGAN 312 (647)
Q Consensus 296 ~~mL~~va~LRe~~~~~ 312 (647)
-.+..-...|.+|+-++
T Consensus 137 ~~~~~~~k~ie~yll~~ 153 (155)
T 2flh_A 137 QSTLMYLRRLERYLSNG 153 (155)
T ss_dssp HHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHhhC
Confidence 12334556677777554
No 63
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=49.30 E-value=14 Score=34.20 Aligned_cols=26 Identities=4% Similarity=0.178 Sum_probs=23.3
Q ss_pred CcceeecccCHHHHHHHHHHHHHHHH
Q 006391 10 SKKGEIACATAGEARKWMEAFDQAKQ 35 (647)
Q Consensus 10 ~~~~~~~~~~~eea~~w~~~~~~~~~ 35 (647)
.+...|.|.|.||+..|+++|+.++.
T Consensus 88 ~r~~~f~A~s~ee~~eWi~aI~~v~~ 113 (149)
T 1x1f_A 88 KEEVQLKTENTESGEEWRGFILTVTE 113 (149)
T ss_dssp SCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 45678999999999999999999987
No 64
>3k3k_A Abscisic acid receptor PYR1; ABA receptor, plant hormone receptor, A sensor, drought tolerance, plant development; HET: A8S; 1.70A {Arabidopsis thaliana} PDB: 3njo_A* 3qn1_A* 3k90_A* 3zvu_A* 3jrq_B* 3kdj_A* 3nef_A* 3neg_A* 3nmn_A* 3kay_A*
Probab=48.89 E-value=1.3e+02 Score=29.44 Aligned_cols=107 Identities=9% Similarity=0.097 Sum_probs=60.4
Q ss_pred EeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCc-eeEEEEEecCCCCCCCCCCCeEEEEEEEEEcCCC---e
Q 006391 146 GVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGH-YDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDG---T 221 (647)
Q Consensus 146 ~vVdaspe~Vfe~L~d~~~~~R~~WD~~~~~~evVE~iD~~-tDIvY~~~~p~~lp~~vs~RDFV~LRswRr~~dG---s 221 (647)
..|+|||++||.+|.|... -..|=+.+.+|++++--++. -.|-+..+... +| --.+.=|--..++.. +
T Consensus 56 ~~I~ApadkVW~lv~dF~~--l~~w~p~V~s~e~~eGd~g~vGsVR~lt~~~G-~p-----~~~vkErL~~lDd~~~~~s 127 (211)
T 3k3k_A 56 QRIHAPPELVWSIVRRFDK--PQTYKHFIKSCSVEQNFEMRVGCTRDVIVISG-LP-----ANTSTERLDILDDERRVTG 127 (211)
T ss_dssp EEESSCHHHHHHHHTCTTC--GGGTCSSEEEEECCTTCCCCTTCEEEEEESSS-SS-----CEEEEEEEEEEETTTTEEE
T ss_pred EEEcCCHHHHHHHHhCcCC--hhHcCccceEEEEecCCCCCCCcEEEEEecCC-Cc-----cceEEEEEEEEeccCCEEE
Confidence 4699999999999999865 67898887777776532111 23555554432 11 112222221223322 3
Q ss_pred EEEEEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccEEEEEEEEc------CCCcc
Q 006391 222 YTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIH------SSGWC 280 (647)
Q Consensus 222 YvIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~VT~I~qvD------lkGw~ 280 (647)
|.|..- .. |-+.|. +-+-+.|.+. + + |+|....+ +.|+.
T Consensus 128 YsIieg-----~l-pv~~Y~------sti~V~p~~~----g---g-V~Wt~~fes~~~D~P~g~~ 172 (211)
T 3k3k_A 128 FSIIGG-----EH-RLTNYK------SVTTVHRFEK----E---N-RIWTVVLESYVVDMPEGNS 172 (211)
T ss_dssp EEEEEE-----TT-GGGTCE------EEEEEEEEEE----T---T-EEEEEEEEEEEEECCSSSS
T ss_pred EEEeec-----Cc-ceeEEE------EEEEEEECCC----C---C-EEEEEEEEEecCCCCCCCC
Confidence 444432 12 344543 5556778764 2 2 88888876 66776
No 65
>2i9y_A Major latex protein-like protein 28 or MLP-like protein 28; AT1G70830, BET V1-like, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana}
Probab=47.92 E-value=1e+02 Score=28.46 Aligned_cols=144 Identities=13% Similarity=-0.010 Sum_probs=76.8
Q ss_pred EEEEEEeecCCHHHHHHHHH-ccCCcccccccC-CCCceEEEEee-cCceeEEEEEecCCCCCCCCCCCeEEEEEEEEE-
Q 006391 141 LVKAVGVIDASADTVFEVVL-NLERHQRYEWDM-LTGDLELVDSY-DGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFR- 216 (647)
Q Consensus 141 ~~Ka~~vVdaspe~Vfe~L~-d~~~~~R~~WD~-~~~~~evVE~i-D~~tDIvY~~~~p~~lp~~vs~RDFV~LRswRr- 216 (647)
.+..+..|++||++||+++. +.. ..+.|=+ .+.+++++|-= ++.-.|.+..+.+.. .+-.++..-.
T Consensus 18 k~~~ev~i~apa~kvw~~~~~d~~--~lpk~~P~~i~s~~~~eGd~gg~Gsir~~~~~~gg--------~~~~~kErl~~ 87 (166)
T 2i9y_A 18 KLETDVEIKASADKFHHMFAGKPH--HVSKASPGNIQGCDLHEGDWGTVGSIVFWNYVHDG--------EAKVAKERIEA 87 (166)
T ss_dssp EEEEEEEESSCHHHHHGGGSSCSS--CCCCSCSSCCSSCCCCSCCSCSTTCCCEEEEEETT--------EEEEEEEEEEE
T ss_pred EEEEEEEecCCHHHHHHHHhcccc--cccccccccceEEEEEcCCCCCCCeEEEEEEecCC--------CceEEEEEEEE
Confidence 45677789999999999965 543 3789998 88888888752 222224444333210 1222222211
Q ss_pred cCCCeEEEEEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccEEEEEEEEcCCCccccccCcccceehhhHH
Q 006391 217 GQDGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHF 296 (647)
Q Consensus 217 ~~dGsYvIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~VT~I~qvDlkGw~~w~p~~~~~~~~~~~~ 296 (647)
.++....+.++-++-+- ..+| +...+-+-+.|.++ ++.|.|+|.+..+.++=. .+. + ..+.-
T Consensus 88 iD~~~~~~~y~iieGd~---~~~~---~~~~~ti~v~p~~~-----g~gs~v~wt~~ye~~~~~--~~~--p---~~~~~ 149 (166)
T 2i9y_A 88 VEPDKNLITFRVIEGDL---MKEY---KSFLLTIQVTPKPG-----GPGSIVHWHLEYEKISEE--VAH--P---ETLLQ 149 (166)
T ss_dssp EETTTTEEEEEECCTTG---GGTE---EEEEEEEEEEEEEE-----TTEEEEEEEEEEEESSTT--TCC--T---HHHHH
T ss_pred EeccCcEEEEEEEeCCC---CCCe---eEEEEEEEEEECCC-----CCCcEEEEEEEEEECCCC--CCC--H---HHHHH
Confidence 12333444444443321 1121 23345666777642 146999999999865432 122 1 11222
Q ss_pred HHHHHHHHHHHHhhcC
Q 006391 297 ALLSQVAGLKEYIGAN 312 (647)
Q Consensus 297 ~mL~~va~LRe~~~~~ 312 (647)
.+......|.+|+.++
T Consensus 150 ~~~~~~k~ie~~l~~~ 165 (166)
T 2i9y_A 150 FCVEVSKEIDEHLLAE 165 (166)
T ss_dssp HHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHhhC
Confidence 2334456666666554
No 66
>3oqu_A Abscisic acid receptor PYL9; RCAR1, hormone receptor; HET: A8S; 2.68A {Arabidopsis thaliana}
Probab=45.21 E-value=2.3e+02 Score=27.61 Aligned_cols=137 Identities=13% Similarity=0.135 Sum_probs=74.4
Q ss_pred eecCCHHHHHHHHHccCCcccccccCCCCceEEEEeecCce-eEEEEEecCCCCCCCCCCCeEEEEEEEEEcCCC---eE
Q 006391 147 VIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHY-DVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDG---TY 222 (647)
Q Consensus 147 vVdaspe~Vfe~L~d~~~~~R~~WD~~~~~~evVE~iD~~t-DIvY~~~~p~~lp~~vs~RDFV~LRswRr~~dG---sY 222 (647)
.|+|||++||.+|.|... -..|-+.+.++++ +- ++.. .|-+..+... +| --++.-|--..++.. +|
T Consensus 59 ~I~ApadkVW~lV~Df~~--l~kW~P~V~s~ev-eG-dg~vGsVR~vt~~~G-~p-----~~~vkErL~~lDde~~~~sY 128 (205)
T 3oqu_A 59 HIKAPLHLVWSLVRRFDQ--PQKYKPFVSRCTV-IG-DPEIGSLREVNVKSG-LP-----ATTSTERLELLDDEEHILGI 128 (205)
T ss_dssp EESSCHHHHHHHHTCTTC--GGGTCTTEEEEEC-CS-SCCTTCEEEEEECTT-SS-----CSEEEEEEEEEETTTTEEEE
T ss_pred EEcCCHHHHHHHHhCcCC--hhHcCccceEEEe-eC-CCCCCcEEEEEEcCC-Cc-----cceEEEEEEEEECCCCEEEE
Confidence 789999999999999976 5689998887753 31 1111 2444444431 11 123322222223332 34
Q ss_pred EEEEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccEEEEEEEEc-CCCccccccCcccceehhhHHHHHHH
Q 006391 223 TILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIH-SSGWCRWKKNSSTKFEKTTHFALLSQ 301 (647)
Q Consensus 223 vIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~VT~I~qvD-lkGw~~w~p~~~~~~~~~~~~~mL~~ 301 (647)
.|..- ..| -+.| .+-.-+.|.+.+ |...|.+.|=...| +.|+. -.-...+...+...=|..
T Consensus 129 sIieG-----~lp-v~~Y------~ati~V~p~~~d---G~~~T~v~ws~~~D~p~g~t---~e~~~~~v~~v~~~gL~~ 190 (205)
T 3oqu_A 129 KIIGG-----DHR-LKNY------SSILTVHPEIIE---GRAGTMVIESFVVDVPQGNT---KDETCYFVEALIRCNLKS 190 (205)
T ss_dssp EEEEE-----SSS-CTTC------EEEEEEEEECCC---C-CEEEEEEEEEEECCTTCC---HHHHHHHHHHHHHHHHHH
T ss_pred EEEec-----Ccc-eeEE------EEEEEEEEccCC---CCceEEEEEEEeccCCCCCC---HHHHHHHHHHHHHHHHHH
Confidence 44432 223 3343 345567787631 22478999988999 78887 221122333333333555
Q ss_pred HHHHHHHhhc
Q 006391 302 VAGLKEYIGA 311 (647)
Q Consensus 302 va~LRe~~~~ 311 (647)
++...|-+..
T Consensus 191 L~~~~e~~~~ 200 (205)
T 3oqu_A 191 LADVSERLAS 200 (205)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhhh
Confidence 5555555543
No 67
>4a8u_A Major pollen allergen BET V 1-J; PR-10 protein; 1.16A {Betula pendula} PDB: 4a8v_A* 4a87_A* 4a81_A* 4a80_A* 4a83_A* 4a86_A* 4a85_A* 4a88_A 4a8g_A* 1b6f_A 1btv_A 1bv1_A 1fsk_A 4a84_A* 1llt_A 1fm4_A* 3k78_A 1qmr_A
Probab=45.12 E-value=1.9e+02 Score=26.62 Aligned_cols=120 Identities=8% Similarity=-0.035 Sum_probs=67.3
Q ss_pred EEEEEeecCCHHHHHHHH-HccCCcccccccCC-CCceEEEEeecCceeEEEEEecCCCCCCCCCCCeEEEEEEEEEcCC
Q 006391 142 VKAVGVIDASADTVFEVV-LNLERHQRYEWDML-TGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQD 219 (647)
Q Consensus 142 ~Ka~~vVdaspe~Vfe~L-~d~~~~~R~~WD~~-~~~~evVE~iD~~tDIvY~~~~p~~lp~~vs~RDFV~LRswRr~~d 219 (647)
+-.+..+.+||+++|..+ .|... -.+.|-+. +.+++++|-=++--.|.+..+.+. .+.+ ++.-|--..++.
T Consensus 5 ~~~ei~i~a~a~kvw~~~~~d~~~-l~pk~~P~~i~s~e~~eGdgg~Gsir~~~~~~g-----~~~~-~~kErl~~iD~~ 77 (159)
T 4a8u_A 5 YETEATSVIPAARLFKAFILDGDN-LFPKVAPQAISSVENIEGNGGPGTIKKISFPEG-----FPFK-YVKDRVDEVDHT 77 (159)
T ss_dssp EEEEEEESSCHHHHHHHHTTTHHH-HHHHHCTTTCCEEEEEECSSSTTCEEEEECCTT-----SSCS-EEEEEEEEEETT
T ss_pred EEEEEEecCCHHHHHHHHhcCccc-cchhhCchhccEEEEEcCCCCCceEEEEEEecC-----CCcc-EEEEEEEEEccc
Confidence 456677899999999998 77754 35789985 688888875332224666655532 1122 232222222333
Q ss_pred CeEEEEEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccEEEEEEEEcCCCcc
Q 006391 220 GTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWC 280 (647)
Q Consensus 220 GsYvIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~VT~I~qvDlkGw~ 280 (647)
. ..+.++=++-+ ..+. + + +...+-+-+.|.++ ++|.++|.+..+.+|-.
T Consensus 78 ~-~~~~y~iiegd-~l~~-~-~--~~y~~ti~v~p~~~------ggs~v~wt~~y~~~~~~ 126 (159)
T 4a8u_A 78 N-FKYSYSVIEGG-PVGD-T-L--EKISNEIKIVATPN------GGSILKINNKYHTKGDH 126 (159)
T ss_dssp T-TEEEEEEEEET-TCBT-T-E--EEEEEEEEEEECTT------SCEEEEEEEEEEESSSC
T ss_pred c-CEEEEEEeeCC-CCcc-c-e--EEEEEEEEEEECCC------CceEEEEEEEEEECCCC
Confidence 2 22222212211 1111 1 1 23345566777553 47999999999987644
No 68
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=42.69 E-value=17 Score=35.60 Aligned_cols=27 Identities=11% Similarity=0.379 Sum_probs=24.4
Q ss_pred CCcceeecccCHHHHHHHHHHHHHHHH
Q 006391 9 ESKKGEIACATAGEARKWMEAFDQAKQ 35 (647)
Q Consensus 9 ~~~~~~~~~~~~eea~~w~~~~~~~~~ 35 (647)
.++...|.|.|.+|+..|+++|+.|+.
T Consensus 129 ~~r~~~l~A~s~~e~~~Wv~aL~~~i~ 155 (228)
T 3tfm_A 129 ADRTFHLIAESPEDASQWFSVLSQVHS 155 (228)
T ss_dssp SSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 356788999999999999999999987
No 69
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=41.26 E-value=19 Score=33.67 Aligned_cols=25 Identities=8% Similarity=0.211 Sum_probs=22.9
Q ss_pred cceeecccCHHHHHHHHHHHHHHHH
Q 006391 11 KKGEIACATAGEARKWMEAFDQAKQ 35 (647)
Q Consensus 11 ~~~~~~~~~~eea~~w~~~~~~~~~ 35 (647)
+..-|.|.|.+|...|+++|+.++.
T Consensus 108 rt~yl~A~s~~E~~eWi~aI~~~i~ 132 (169)
T 1btk_A 108 GPLYVFSPTEELRKRWIHQLKNVIR 132 (169)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHHHT
T ss_pred ceEEEEcCCHHHHHHHHHHHHHHHH
Confidence 5678899999999999999999987
No 70
>3rws_A MTN13 protein; zeatin, cytokinin, hormone, lucerne, nodulin, NODU plant protein; HET: ZEA; 1.85A {Medicago truncatula}
Probab=40.12 E-value=2.3e+02 Score=26.35 Aligned_cols=150 Identities=8% Similarity=-0.056 Sum_probs=78.4
Q ss_pred EEEEEEeecCCHHHHHHHH-HccCCcccccccCC-CCceEEEEeecCceeEEEEEecCCCCCCCCCCCeEEEEEEEEEcC
Q 006391 141 LVKAVGVIDASADTVFEVV-LNLERHQRYEWDML-TGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQ 218 (647)
Q Consensus 141 ~~Ka~~vVdaspe~Vfe~L-~d~~~~~R~~WD~~-~~~~evVE~iD~~tDIvY~~~~p~~lp~~vs~RDFV~LRswRr~~ 218 (647)
.+-.+..+.+||+++|..+ .|... ..+.|-+. +.+++++|-=++--.|.+..+. . + . -++--|--..++
T Consensus 10 ~~~~ei~i~apa~kvw~~~v~d~~~-l~pk~~P~~v~s~e~~eGdgg~Gsir~~t~~-g--~--~---~~~kErl~~iD~ 80 (168)
T 3rws_A 10 TSESEYVSSLSAEKLYRGIVEDGNI-IYPKALPRFIEKAETLEGDGGPGTIKKLTFV-G--D--F---GSTKQHIDMVDR 80 (168)
T ss_dssp EEEEEEEESSCHHHHHHHHHTSHHH-HHHHHSTTTEEEEEEEESSSSTTCEEEEEES-S--S--S---CEEEEEEEEEET
T ss_pred EEEEEEEecCCHHHHHHHHhcCccc-cchhhCccccceEEEeeCCCCCCeEEEEEEc-C--C--C---eEEEEEEEEEcc
Confidence 4566678899999999997 77753 36789985 7777877653322235555433 1 1 0 123222222232
Q ss_pred CCeEEEEEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccEEEEEEEEcCCCc-cccccCcccceehhhHHH
Q 006391 219 DGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGW-CRWKKNSSTKFEKTTHFA 297 (647)
Q Consensus 219 dGsYvIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~VT~I~qvDlkGw-~~w~p~~~~~~~~~~~~~ 297 (647)
.. ..+.++=++-+-.. .. +-+...+-+-+.|.+. ++|.|+|.+..+.+|= .. +.- ... +...-.
T Consensus 81 ~~-~~~sY~iiegd~l~---~~-p~~~y~~ti~v~p~~~------ggs~v~wt~~y~~~~~d~~--~~~-e~~-k~~~~~ 145 (168)
T 3rws_A 81 EN-CAYTYSVYEGIALS---DQ-PLEKIVFEFKLVPTPE------EGCIVKSTTKYYTKGDDIE--LSK-DYL-EAGIER 145 (168)
T ss_dssp TT-TEEEEEECSSCCBT---TB-CEEEEEEEEEEEECTT------SCEEEEEEEEEEECSSSCC--CCH-HHH-HHHHHH
T ss_pred cC-CEEEEEEEccCccc---Cc-CceEEEEEEEEEECCC------CceEEEEEEEEEECCCccC--CCH-HHH-HHHHHH
Confidence 22 33332223221111 00 1223445666777553 4799999999999876 31 210 010 111112
Q ss_pred HHHHHHHHHHHhhcCCC
Q 006391 298 LLSQVAGLKEYIGANPA 314 (647)
Q Consensus 298 mL~~va~LRe~~~~~~~ 314 (647)
+..-...+-.|+-+++.
T Consensus 146 ~~~~~k~ie~yllanp~ 162 (168)
T 3rws_A 146 FEGFTKAVESFLLANPD 162 (168)
T ss_dssp HHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHhChH
Confidence 23345556667777665
No 71
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=39.28 E-value=16 Score=33.14 Aligned_cols=28 Identities=21% Similarity=0.273 Sum_probs=24.5
Q ss_pred CCcceeecccCHHHHHHHHHHHHHHHHH
Q 006391 9 ESKKGEIACATAGEARKWMEAFDQAKQQ 36 (647)
Q Consensus 9 ~~~~~~~~~~~~eea~~w~~~~~~~~~~ 36 (647)
+.+...|+|.|.||-..||+||..|+-|
T Consensus 84 ~~~ty~~~Adseee~~~WikAi~~A~~~ 111 (126)
T 1wi1_A 84 EGDTVIFASDDEQDRILWVQAMYRATGQ 111 (126)
T ss_dssp SSCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred CCceEEEEcCCHHHHHHHHHHHHHHhcc
Confidence 3556889999999999999999999764
No 72
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=37.08 E-value=26 Score=35.20 Aligned_cols=28 Identities=11% Similarity=0.184 Sum_probs=24.3
Q ss_pred CcceeecccCHHHHHHHHHHHHHHHHHH
Q 006391 10 SKKGEIACATAGEARKWMEAFDQAKQQA 37 (647)
Q Consensus 10 ~~~~~~~~~~~eea~~w~~~~~~~~~~~ 37 (647)
.+...|.|.|.+|+..|+++|+.|+...
T Consensus 99 ~r~y~f~A~s~ee~~~Wi~aI~~a~~~~ 126 (263)
T 3a8p_A 99 GDVYLFQATSQTDLENWVTAIHSACASL 126 (263)
T ss_dssp SCEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence 4456799999999999999999999844
No 73
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=36.81 E-value=30 Score=35.90 Aligned_cols=33 Identities=12% Similarity=0.091 Sum_probs=27.7
Q ss_pred CcceeecccCHHHHHHHHHHHHHHHHHHHHHHh
Q 006391 10 SKKGEIACATAGEARKWMEAFDQAKQQAEVELS 42 (647)
Q Consensus 10 ~~~~~~~~~~~eea~~w~~~~~~~~~~~~~~~~ 42 (647)
.....+.|.|.||-..|+++|++|+.++.....
T Consensus 300 ~~~~~l~a~s~~ek~~W~~~i~~ai~~~~~~~r 332 (353)
T 1kz7_A 300 EEVYIIQAPTPEIKAAWVNAIRKVLTSQLQACR 332 (353)
T ss_dssp TEEEEEECSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 456889999999999999999999996555554
No 74
>3q6a_A Uncharacterized protein; structural genomics, PSI-biology; 1.80A {Staphylococcus saprophyticus subsp}
Probab=35.90 E-value=32 Score=29.99 Aligned_cols=29 Identities=21% Similarity=0.264 Sum_probs=24.6
Q ss_pred EEEEEeecCCHHHHHHHHHccCCcccccccC
Q 006391 142 VKAVGVIDASADTVFEVVLNLERHQRYEWDM 172 (647)
Q Consensus 142 ~Ka~~vVdaspe~Vfe~L~d~~~~~R~~WD~ 172 (647)
+..+..|+|||++||+.|.|.+. ..+|..
T Consensus 3 i~~~~~i~ap~e~Vw~altd~~~--~~~W~~ 31 (135)
T 3q6a_A 3 IITKMQVDVPRETVFEAFVDPEK--IGGFWF 31 (135)
T ss_dssp EEEEEEESSCHHHHHHHHHCTTT--GGGTSS
T ss_pred EEEEEEeCCCHHHHHHHHcCHHH--hcccCC
Confidence 56677899999999999999875 778865
No 75
>3qrz_A Abscisic acid receptor PYL5; crystal, hormone receptor; 2.60A {Arabidopsis thaliana}
Probab=35.32 E-value=25 Score=34.88 Aligned_cols=112 Identities=13% Similarity=0.064 Sum_probs=54.8
Q ss_pred EeecCCHHHHHHHHHccCCcccccccCCCCceEEEEeec-CceeEEEEEecCCCCCCCCCCCeEEEEEEEEEcCCCeEEE
Q 006391 146 GVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYD-GHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDGTYTI 224 (647)
Q Consensus 146 ~vVdaspe~Vfe~L~d~~~~~R~~WD~~~~~~evVE~iD-~~tDIvY~~~~p~~lp~~vs~RDFV~LRswRr~~dGsYvI 224 (647)
..|+|||++||.++.|... -..|-+.+.++++++-=. +--.|-+..+.+. .| ...-++ |--.. ++..+.+
T Consensus 84 ~~I~ApadkVW~lv~Df~~--pk~w~p~I~s~el~eGdg~gvGSVR~lt~~~G-~p-~~~vkE----rLe~i-Dde~~~~ 154 (223)
T 3qrz_A 84 QMIHAPPESVWALVRRFDN--PKVYKNFIRQCRIVQGDGLHVGDLREVMVVSG-LP-AVSSTE----RLEIL-DEERHVI 154 (223)
T ss_dssp CCCSSCHHHHHHHHHCCSS--GGGTCSSCCCCCCCC---CCSSCCCCCCC----CC-CCCCCC----CCSEE-ETTTTEE
T ss_pred EEEcCCHHHHHHHHhCCCC--hhHcchhcCEEEEEcCCCCCCCeEEEEEecCC-Cc-cceEEE----EEEEE-eccCCEE
Confidence 3689999999999999865 668999999888875311 1111222222211 01 001111 00011 2333444
Q ss_pred EEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccEEEEEEEEc-CCCcc
Q 006391 225 LQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIH-SSGWC 280 (647)
Q Consensus 225 a~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~VT~I~qvD-lkGw~ 280 (647)
.++=++ ... |...| -+-+-+.|.+. +.|.|+|....| +.|+.
T Consensus 155 sYsIie-G~~-p~~~Y------~stikV~p~~d------GGT~V~Ws~~f~pp~g~~ 197 (223)
T 3qrz_A 155 SFSVVG-GDH-RLKNY------RSVTTLHASDD------EGTVVVESYIVDVPPGNT 197 (223)
T ss_dssp ECCCTT-CSS-SCCCC------CCEEEC--------------CCEEEEEECSCSSSC
T ss_pred EEEEEe-CCC-ccccE------EEEEEEEEcCC------CCEEEEEEEEEEcCCCCC
Confidence 333333 222 33333 22356677543 469999999999 68887
No 76
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=32.64 E-value=41 Score=35.54 Aligned_cols=38 Identities=16% Similarity=0.335 Sum_probs=28.9
Q ss_pred eeecCCCCCcceeecccCHHHHHHHHHHHHHHHHHHHHH
Q 006391 2 RLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQAEVE 40 (647)
Q Consensus 2 ~~yn~~~~~~~~~~~~~~~eea~~w~~~~~~~~~~~~~~ 40 (647)
.|+++. ......|.|.|.+|-..|+++|++|+.+....
T Consensus 331 ~i~~~~-~~~~~~l~a~s~~eK~~Wi~~i~~a~~~~~~~ 368 (402)
T 2dfk_A 331 KLHNKE-TEEVHLFFAKKLEEKIRWLRAFREERKMVQED 368 (402)
T ss_dssp EEEESS-SSCEEEEECSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECC-CCeEEEEEeCCHHHHHHHHHHHHHHHHHHHhh
Confidence 445443 24567899999999999999999999854433
No 77
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=30.77 E-value=33 Score=35.56 Aligned_cols=28 Identities=11% Similarity=0.248 Sum_probs=25.0
Q ss_pred CcceeecccCHHHHHHHHHHHHHHHHHH
Q 006391 10 SKKGEIACATAGEARKWMEAFDQAKQQA 37 (647)
Q Consensus 10 ~~~~~~~~~~~eea~~w~~~~~~~~~~~ 37 (647)
.....|-|.|.+|-..|+++|.+|++++
T Consensus 293 ~~~~~l~a~s~~ek~~W~~~i~~ai~~~ 320 (354)
T 2rgn_B 293 IQRYVLQAADPAISQAWIKHVAQILESQ 320 (354)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence 4677899999999999999999999943
No 78
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=30.77 E-value=37 Score=36.45 Aligned_cols=35 Identities=17% Similarity=0.426 Sum_probs=27.5
Q ss_pred eeecCCCCCcceeecccCHHHHHHHHHHHHHHHHHH
Q 006391 2 RLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQA 37 (647)
Q Consensus 2 ~~yn~~~~~~~~~~~~~~~eea~~w~~~~~~~~~~~ 37 (647)
.|+++. ......|.|.|.+|-..|+++|++|+.+.
T Consensus 408 ~i~~~~-~~~~~~l~a~s~~eK~~W~~~i~~a~~~~ 442 (466)
T 2pz1_A 408 RLHRGA-TGDSHLLCTRKPEQKQRWLKAFAREREQV 442 (466)
T ss_dssp EEECSS-SCCEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCC-CCeEEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence 455543 24567899999999999999999998843
No 79
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=30.60 E-value=26 Score=35.34 Aligned_cols=26 Identities=23% Similarity=0.358 Sum_probs=22.6
Q ss_pred CcceeecccCHHHHHHHHHHHHHHHH
Q 006391 10 SKKGEIACATAGEARKWMEAFDQAKQ 35 (647)
Q Consensus 10 ~~~~~~~~~~~eea~~w~~~~~~~~~ 35 (647)
.+...|+|.|.+|+..|+++|+.++.
T Consensus 87 ~rty~l~A~se~e~~~Wi~aL~~~~~ 112 (264)
T 1qqg_A 87 DEHFAIAADSEAEQDSWYQALLQLHN 112 (264)
T ss_dssp SCEEEEECSSHHHHHHHHHHHHHHC-
T ss_pred CEEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 45678999999999999999999977
No 80
>2vjg_A Major allergen DAU C 1; major carrot allergen, pathogenesis-related protein, plant defense; HET: P4C PG4 PGE; 2.70A {Daucus carota} PDB: 2wql_A* 2bk0_A
Probab=28.80 E-value=3.1e+02 Score=24.99 Aligned_cols=120 Identities=10% Similarity=-0.091 Sum_probs=65.5
Q ss_pred EEEEEEeecCCHHHHHHH-HHccCCcccccccCC-CCceEEEEeecCceeEEEEEecCCCCCCCCCCCeEEEEEEEEEcC
Q 006391 141 LVKAVGVIDASADTVFEV-VLNLERHQRYEWDML-TGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQ 218 (647)
Q Consensus 141 ~~Ka~~vVdaspe~Vfe~-L~d~~~~~R~~WD~~-~~~~evVE~iD~~tDIvY~~~~p~~lp~~vs~RDFV~LRswRr~~ 218 (647)
.+-.+..+.+||+++|.. +.|... -++.|-+. +.++++ |-=++.-.|.+..+.... | . -++-=|--..++
T Consensus 5 ~~~~ei~i~a~a~kvw~~~v~d~~~-l~pk~~P~~v~s~e~-eGdg~~Gsir~~~~~~g~-~--~---~~~kErl~~iD~ 76 (154)
T 2vjg_A 5 SHSLEITSSVSAEKIFSGIVLDVDT-VIPKAATGAYKSVEV-KGDGGAGTVRIITLPEGS-P--I---TTMTVRTDAVNK 76 (154)
T ss_dssp EEEEEEEESSCHHHHHHHHTTTHHH-HHHHHSTTTCSEEEE-ESSSSTTCEEEEECCTTC-S--C---CEEEEEEEEEET
T ss_pred EEEEEEEecCCHHHHHHhhhCCccc-cchhhccCceeEEEE-eCCCCCceEEEEEecCCC-C--c---eEEEEEEEEEec
Confidence 356677899999999998 878754 34789985 677777 542222236666554321 1 1 122222111233
Q ss_pred CCeEEEEEeeccCCCCCCCCCeeeEEEcceeEEEEecCCCCCCCCCccEEEEEEEEcCCCcc
Q 006391 219 DGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWC 280 (647)
Q Consensus 219 dGsYvIa~~SV~Hp~~Pp~~G~VRAei~~sGylI~P~~~~~~~~~~~~~VT~I~qvDlkGw~ 280 (647)
.. ..+.++=++-+ ..+. + + +...+-+-+.|.++ +.|.++|.+..+.+|=.
T Consensus 77 ~~-~~~~y~iiegd-~l~~-~-~--~~~~~ti~v~p~~~------ggs~v~wt~~y~~~~~~ 126 (154)
T 2vjg_A 77 EA-LSYDSTVIDGD-ILLG-F-I--ESIETHMVVVPTAD------GGSITKTTAIFHTKGDA 126 (154)
T ss_dssp TT-TEEEEEEEESG-GGTT-T-E--EEEEEEEEEEECTT------SCEEEEEEEEEEESTTC
T ss_pred cC-CEEEEEEEecC-CCcc-c-e--EEEEEEEEEEECCC------CcEEEEEEEEEEECCCC
Confidence 22 22222222221 1111 1 1 23344556777543 46999999999988765
No 81
>2leq_A Uncharacterized protein; start domains, structural genomics, PSI-biology, protein STR initiative; NMR {Cytophaga hutchinsonii}
Probab=27.76 E-value=31 Score=29.78 Aligned_cols=30 Identities=27% Similarity=0.391 Sum_probs=25.4
Q ss_pred cEEEEEEeecCCHHHHHHHHHccCCccccccc
Q 006391 140 VLVKAVGVIDASADTVFEVVLNLERHQRYEWD 171 (647)
Q Consensus 140 ~~~Ka~~vVdaspe~Vfe~L~d~~~~~R~~WD 171 (647)
..+..+..|++||++||+.|.|... ..+|-
T Consensus 5 ~~i~~~~~i~ap~e~Vw~~ltd~~~--~~~W~ 34 (146)
T 2leq_A 5 LIAQVKTVINAPIEKVWEALVNPEI--IKEYM 34 (146)
T ss_dssp EEEEEEEEECSCHHHHHHHHSCTTH--HHHHS
T ss_pred ceEEEEEEECCCHHHHHHHHcCHHH--hceeE
Confidence 4577888999999999999999865 67883
No 82
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=26.57 E-value=48 Score=34.85 Aligned_cols=28 Identities=29% Similarity=0.420 Sum_probs=24.8
Q ss_pred CcceeecccCHHHHHHHHHHHHHHHHHH
Q 006391 10 SKKGEIACATAGEARKWMEAFDQAKQQA 37 (647)
Q Consensus 10 ~~~~~~~~~~~eea~~w~~~~~~~~~~~ 37 (647)
....+|.|.|.+|-..|+++|++|+.++
T Consensus 310 ~~~~~l~a~s~~ek~~W~~~i~~ai~~~ 337 (406)
T 2vrw_B 310 AQGYELFFKTRELKKKWMEQFEMAISNI 337 (406)
T ss_dssp SCEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEeCCCHHHHHHHHHHHHHHHhhh
Confidence 4568999999999999999999999854
No 83
>3pu2_A Uncharacterized protein; SRPBCC superfamily, PSI-biology, NESG, RHR263, structural GE protein structure initiative; HET: MSE; 2.61A {Rhodobacter sphaeroides}
Probab=26.56 E-value=60 Score=29.57 Aligned_cols=31 Identities=6% Similarity=0.110 Sum_probs=27.3
Q ss_pred cEEEEEEeecCCHHHHHHHHHccCCcccccccC
Q 006391 140 VLVKAVGVIDASADTVFEVVLNLERHQRYEWDM 172 (647)
Q Consensus 140 ~~~Ka~~vVdaspe~Vfe~L~d~~~~~R~~WD~ 172 (647)
..+..+..|++||++||+.|.+.+. ..+|-.
T Consensus 13 ~~i~~~~~i~Ap~e~Vw~altdp~~--~~~W~~ 43 (164)
T 3pu2_A 13 TRLEFRRHFAATPEQLWAALTSPAL--LPAWLF 43 (164)
T ss_dssp TEEEEEEEESSCHHHHHHHHHCTTT--GGGTSC
T ss_pred ceEEEEEEECCCHHHHHHHhcCHHH--HhhEeC
Confidence 5788999999999999999999876 778865
No 84
>2l8o_A Uncharacterized protein; mixed alpha-beta protein, PSI-biology, structural genomics, structure initiative; NMR {Cytophaga hutchinsonii}
Probab=25.41 E-value=24 Score=31.46 Aligned_cols=28 Identities=11% Similarity=0.184 Sum_probs=24.2
Q ss_pred EEEEEEeecCCHHHHHHHHHccCCcccccc
Q 006391 141 LVKAVGVIDASADTVFEVVLNLERHQRYEW 170 (647)
Q Consensus 141 ~~Ka~~vVdaspe~Vfe~L~d~~~~~R~~W 170 (647)
.+..+..|+|||++||+.|.|.+. ..+|
T Consensus 3 ~i~~~~~i~Ap~e~Vw~altdpe~--~~~W 30 (144)
T 2l8o_A 3 KITVEVTVYAAIEKVWKYWNEPAH--IMKW 30 (144)
T ss_dssp SEEEEEEECSCHHHHHHHHHCHHH--HHHH
T ss_pred EEEEEEEECCCHHHHHHHHCCHHH--Hhhc
Confidence 467788999999999999999865 6788
No 85
>2lgh_A Uncharacterized protein; AHSA1, start domain, COG3832, PF08327, HSP90, heat shock, ST genomics, PSI-biology; NMR {Aeromonas hydrophila subsp}
Probab=21.98 E-value=42 Score=29.77 Aligned_cols=27 Identities=11% Similarity=0.197 Sum_probs=23.2
Q ss_pred EEEEEeecCCHHHHHHHHHccCCcccccc
Q 006391 142 VKAVGVIDASADTVFEVVLNLERHQRYEW 170 (647)
Q Consensus 142 ~Ka~~vVdaspe~Vfe~L~d~~~~~R~~W 170 (647)
+..+..|+|||++||+.|.|.+. ..+|
T Consensus 3 i~~~~~i~Ap~e~Vw~altdp~~--~~~W 29 (144)
T 2lgh_A 3 ISIEAHIEQEIEAVWWAWNDPDC--IARW 29 (144)
T ss_dssp EEEEEEESSCHHHHHHHHHCHHH--HTTS
T ss_pred EEEEEEeCCCHHHHHHHhCCHHH--Hhcc
Confidence 56777899999999999999865 6788
No 86
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=20.98 E-value=74 Score=27.80 Aligned_cols=24 Identities=21% Similarity=0.483 Sum_probs=21.5
Q ss_pred ceeecccCHHHHHHHHHHHHHHHH
Q 006391 12 KGEIACATAGEARKWMEAFDQAKQ 35 (647)
Q Consensus 12 ~~~~~~~~~eea~~w~~~~~~~~~ 35 (647)
.-.+.|.|.+|-..|+.+|++|++
T Consensus 84 s~~~~aes~~eK~~Wl~~~~~a~~ 107 (113)
T 1zc3_B 84 SRIFQAENAKIKREWLEVLEETKR 107 (113)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHHH
T ss_pred eEEEEcCCHHHHHHHHHHHHHHHH
Confidence 346789999999999999999987
No 87
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=20.31 E-value=69 Score=28.44 Aligned_cols=27 Identities=7% Similarity=0.396 Sum_probs=23.7
Q ss_pred CcceeecccCHHHHHHHHHHHHHHHHH
Q 006391 10 SKKGEIACATAGEARKWMEAFDQAKQQ 36 (647)
Q Consensus 10 ~~~~~~~~~~~eea~~w~~~~~~~~~~ 36 (647)
.+-+-|.|.|.+||..|+..++..+.+
T Consensus 96 ~k~LdlvA~s~~e~~~Wv~gL~~L~~~ 122 (131)
T 1mai_A 96 RNTLDLIAPSPADAQHWVQGLRKIIHH 122 (131)
T ss_dssp CCCEEEECSSHHHHHHHHHHHHHHHC-
T ss_pred CceEEEEeCCHHHHHHHHHHHHHHHHh
Confidence 568899999999999999999988763
No 88
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=20.18 E-value=67 Score=35.72 Aligned_cols=28 Identities=29% Similarity=0.420 Sum_probs=23.3
Q ss_pred CcceeecccCHHHHHHHHHHHHHHHHHH
Q 006391 10 SKKGEIACATAGEARKWMEAFDQAKQQA 37 (647)
Q Consensus 10 ~~~~~~~~~~~eea~~w~~~~~~~~~~~ 37 (647)
....+|.|.|.+|-..|+++|++|+++.
T Consensus 482 ~~~~~L~A~S~eeK~~Wi~~I~~ai~~~ 509 (587)
T 3ky9_A 482 AQGYELFFKTRELKKKWMEQFEMAISNI 509 (587)
T ss_dssp ---CEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEeCCHHHHHHHHHHHHHHhhhh
Confidence 3678999999999999999999999843
Done!