BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006396
(647 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LMY5|PPR41_ARATH Putative pentatricopeptide repeat-containing protein At1g13630
OS=Arabidopsis thaliana GN=At1g13630 PE=2 SV=3
Length = 826
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/670 (53%), Positives = 472/670 (70%), Gaps = 42/670 (6%)
Query: 1 MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
ML F+ SR MV D+++++ KMK+ +L VS Q+YNS+LY+ R TD MWD+Y +IK
Sbjct: 171 MLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIK----D 226
Query: 61 RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
+N +T S V+DGLC+Q +L+DA+LFL+ + K+ GPSVVS N+IMS YCKLGF ++AK
Sbjct: 227 KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSF 286
Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
FC +LK GL P +S+NILI+GLC+ GS+ EALE +DM +HGVEPD++TY+ILAKGFHL
Sbjct: 287 FCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHL 346
Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN-VI 239
L ISGAW+VI+ +L KG PD++TYT+L+CG CQ+GN++ GL L + MLS+GF+LN +I
Sbjct: 347 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 406
Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
SV+LS +CK+GRIDEAL L +M+A GL PDLV YSI+I GLCK K A+ LY+EM
Sbjct: 407 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 466
Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
C KRI PNS HGA+LLGLC+K M+ EAR DSLI S D+VLYNI+IDGY K G I
Sbjct: 467 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 526
Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
EA++L++ +IE I+PS+ TFNSLIYG+CK +A+AR++LD IKL+GL PS V+YTT
Sbjct: 527 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 586
Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK-------LQEAV---- 468
M+AY GN + + L +EM+ + I PT+VTY+V+ KGLC+ WK L+E +
Sbjct: 587 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 646
Query: 469 -QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
Q L DM G+ PDQITYNTII+ C+ K L AF L M NL+ +SATYNILID
Sbjct: 647 KQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDS 706
Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
LCV G ++ AD + SLQE N+SL+K AYTT+IKAHC +GD A+ F Q++ +GF +S
Sbjct: 707 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVS 766
Query: 588 IRDY---------------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
IRDY +K FFC+MLS G PD +ICEVM+ + EL +
Sbjct: 767 IRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPDLDICEVMIKS----------DELLS 816
Query: 633 VMIKSGLLPD 642
IK GLLPD
Sbjct: 817 WTIKWGLLPD 826
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 81/191 (42%), Gaps = 34/191 (17%)
Query: 464 LQEAVQLLED-MYVIGVTPDQ------ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
L +++++D +Y++ DQ +YN+++ F + + ++ + +
Sbjct: 175 LSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIK-------DK 227
Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
TY+ ++DGLC L++A L + + +I + V++ +I+ +C G V
Sbjct: 228 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV------- 280
Query: 577 CQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
D KSFFC +L G P +++ G + ELA+ M K
Sbjct: 281 -------------DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNK 327
Query: 637 SGLLPDKFLIN 647
G+ PD N
Sbjct: 328 HGVEPDSVTYN 338
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 290 bits (742), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 176/623 (28%), Positives = 304/623 (48%), Gaps = 67/623 (10%)
Query: 86 LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCI 145
LQET + S V + ++ Y +L + A + L +G P SYN ++
Sbjct: 123 LQETYDLCYSTSSV-FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIR 181
Query: 146 AG-SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
+ ++ A +M V P+ TY+IL +GF I A + K+ KG P++V
Sbjct: 182 SKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVV 241
Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
TY LI GYC++ +++G KL M +G + N+I+Y+V+++ +C+ GR+ E +L EM
Sbjct: 242 TYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM 301
Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
G D VTY+ LI+G CK+ H+A+ ++ EM ++P+ + +++ +C+ +
Sbjct: 302 NRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNM 361
Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
A + D + + + Y ++DG+ + G + EA ++ R++ + SPS+VT+N+L
Sbjct: 362 NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 421
Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
I G C GK+ DA +L+ +K GL P V+Y+T ++ +C ++ L + +EM K I
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 481
Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
P +TY+ +I+G C+Q + +EA L E+M +G+ PD+ TY +I ++C DL KA Q
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQ 541
Query: 505 LLNQMWLHNLEPTSATYNILIDGL------------------------------------ 528
L N+M + P TY++LI+GL
Sbjct: 542 LHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS 601
Query: 529 --------------CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
C+ G + AD + S+ N AY +I HC GD+ KA T
Sbjct: 602 NIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYT 661
Query: 575 FFCQMVEKGF---EISIRDYTK------------SFFCMMLSNGFPPDQEICEVMLIAFH 619
+ +MV+ GF +++ K S +L + + E +V++ H
Sbjct: 662 LYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINH 721
Query: 620 QGGDLGSVFELAAVMIKSGLLPD 642
+ G++ V ++ A M K G LP+
Sbjct: 722 REGNMDVVLDVLAEMAKDGFLPN 744
Score = 247 bits (631), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 153/571 (26%), Positives = 282/571 (49%), Gaps = 25/571 (4%)
Query: 18 VIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLC 74
V +M E + ++ TYN L+ + D+ L+D ++ NV T + +IDG C
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 75 QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
+ ++ D L+ A K P+++S N +++ C+ G + + M + G D
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
+YN LI G C G+ +AL +M RHG+ P ITY+ L ++ A + + ++
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
++G P+ TYT L+ G+ Q G + E ++ M GF +V+ Y+ L++ C +G++
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
++A+ +L +M+ GL PD+V+YS ++ G C+ V +A+++ EM K I P++ + ++
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491
Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
+ G CE+ EA ++ ++ D Y +I+ Y G++ +A+QL+ +++EK +
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
P +VT++ LI G K + +A+RLL + PS VTY T + C + +++
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN-CSNIEFKSVVS 610
Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
L IKG C + + EA Q+ E M PD YN +I C
Sbjct: 611 L-------------------IKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHC 651
Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS-LQEHNISLTK 553
+ D+RKA+ L +M + T L+ L G + + ++V L+ +S +
Sbjct: 652 RAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAE 711
Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
A +++ + EG++ + +M + GF
Sbjct: 712 QA-KVLVEINHREGNMDVVLDVLAEMAKDGF 741
Score = 209 bits (531), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 209/405 (51%), Gaps = 21/405 (5%)
Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK-VHKAIQLYNEM 299
+ +++ S + ID+AL +++ +A G P +++Y+ ++ + + + A ++ EM
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
++SPN F + ++ G C I A FD + C+ +VV YN +IDGY KL I
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
+ +L R + K + P+++++N +I G C+ G++ + +L + G VTY T
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
+ YC+EGN + L + EM + P+ +TYT +I +CK + A++ L+ M V G+
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
P++ TY T++ F + + +A+++L +M + P+ TYN LI+G CV G +++A
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM 599
+L ++E +S V+Y+T++ C DV +A+ +MVEKG +
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK-------------- 482
Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
PD ++ F + +L M++ GL PD+F
Sbjct: 483 ------PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF 521
Score = 149 bits (376), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 159/347 (45%), Gaps = 53/347 (15%)
Query: 6 YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRN 62
Y + G H A+ + A+M L S+ TY SL++++ M + D ++V N
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPN 379
Query: 63 VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
T + ++DG Q+ + +A L+E F PSVV+ NA+++ +C G E A +
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439
Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
M + GL PD SY+ ++ G C + ++EAL +M G++PD ITYS L +GF
Sbjct: 440 DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQR 499
Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
+ A + +++L G PD TYT LI YC G++E+ L+L M+ +G +V+ YS
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYS 559
Query: 243 VLLSSMCKSGRIDEA----LGLLYE----------------------------------- 263
VL++ + K R EA L L YE
Sbjct: 560 VLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKG 619
Query: 264 -----------MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
M KPD Y+I+I G C+ + KA LY EM
Sbjct: 620 MMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 279 bits (713), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 180/636 (28%), Positives = 319/636 (50%), Gaps = 27/636 (4%)
Query: 12 VHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIK-VSETPRNVYTNS 67
V +AV + + DLK + TY +L+Y L + +I ++ D++ + +P +S
Sbjct: 278 VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS 337
Query: 68 IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
+V +GL ++ ++++A+ ++ P++ NA++ CK A+ LF M K
Sbjct: 338 LV-EGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKI 396
Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
GL P+ +Y+ILI C G ++ AL F +M G++ Y+ L G IS A
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
+ +++ K +P +VTYT L+ GYC G + + L+L M +G ++ ++ LLS
Sbjct: 457 EGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSG 516
Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
+ ++G I +A+ L EM +KP+ VTY+++I G C++ + KA + EM K I P+
Sbjct: 517 LFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576
Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
++++ ++ GLC +EA+++ D L NC + + Y ++ G+ + G + EA+ + +
Sbjct: 577 TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQ 636
Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
+++++ + +V + LI G K+ LL + GL+P V YT+ ++A + G
Sbjct: 637 EMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTG 696
Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
+ + + M + P VTYT VI GLCK + EA L M + P+Q+TY
Sbjct: 697 DFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYG 756
Query: 488 TIIRSFCKCK-DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
+ K + D++KA +L N + L L +ATYN+LI G C G ++ A L+ +
Sbjct: 757 CFLDILTKGEVDMQKAVELHNAI-LKGLLANTATYNMLIRGFCRQGRIEEASELITRMIG 815
Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPP 606
+S + YTT+I C DV KA+ + M EKG P
Sbjct: 816 DGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIR--------------------P 855
Query: 607 DQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
D+ ++ G++G EL M++ GL+P+
Sbjct: 856 DRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 269 bits (688), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 157/536 (29%), Positives = 270/536 (50%), Gaps = 15/536 (2%)
Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
++ K L P+ + + L+HGL A+E NDM G+ PD Y+ + + L
Sbjct: 182 MITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELK 241
Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
+S A ++I + G D +IV Y VLI G C+ V E + +++ + + K +V+ Y
Sbjct: 242 DLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYC 301
Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
L+ +CK + L ++ EM + P S L+ GL K+ K+ +A+ L +
Sbjct: 302 TLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDF 361
Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
+SPN F + A++ LC+ EA + FD + + V Y+I+ID + + G + A
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421
Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
+ ++++ + S+ +NSLI G CK G ++ A + + LEP+ VTYT+ M
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481
Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
YC +G I + L L EM K I P+ T+T ++ GL + +++AV+L +M V P+
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541
Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
++TYN +I +C+ D+ KAF+ L +M + P + +Y LI GLC+ G A +
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601
Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY----------- 591
L + N L ++ YT ++ C EG + +A++ +MV++G ++ + Y
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHK 661
Query: 592 -TKSFFCM---MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
K FF + M G PD I M+ A + GD F + +MI G +P++
Sbjct: 662 DRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/495 (27%), Positives = 239/495 (48%), Gaps = 19/495 (3%)
Query: 5 VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSET----- 59
++ R G + A+ + +M + LK+S+ YNSL+ H + DI +E
Sbjct: 411 MFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING--HCK-----FGDISAAEGFMAEM 463
Query: 60 -----PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
V T + ++ G C + ++ A+ E GK PS+ + ++S + G
Sbjct: 464 INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLI 523
Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
A LF M ++ + P+ +YN++I G C G M +A EF +M G+ PD +Y L
Sbjct: 524 RDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPL 583
Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
G L Q S A + L + + + YT L+ G+C+ G +EE L + + M+ +G
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
L+++ Y VL+ K GLL EM GLKPD V Y+ +I K +A
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 703
Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
+++ M ++ PN + A++ GLC+ + EA + + + + + V Y +D
Sbjct: 704 IWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILT 763
Query: 355 KLG-NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
K ++ +AV+L+ ++ K + + T+N LI GFC+ G++ +A L+ + G+ P
Sbjct: 764 KGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDC 822
Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
+TYTT +N C ++++ + L M K I P V Y +I G C ++ +A +L +
Sbjct: 823 ITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNE 882
Query: 474 MYVIGVTPDQITYNT 488
M G+ P+ T T
Sbjct: 883 MLRQGLIPNNKTSRT 897
Score = 209 bits (533), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 139/512 (27%), Positives = 250/512 (48%), Gaps = 5/512 (0%)
Query: 13 HDAVFVIAKMKELDLKVSIQTYNSL--LYNLR-HTDIMWDLYDDIKVSETPRNVYTNSIV 69
H+A + +M ++ L+ + TY+ L ++ R D ++ + +VY + +
Sbjct: 384 HEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSL 443
Query: 70 IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGL 129
I+G C+ + A F+ E K+ P+VV+ ++M YC G A L+ M G+
Sbjct: 444 INGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
P +++ L+ GL AG + +A++ N+M V+P+ +TY+++ +G+ +S A++
Sbjct: 504 APSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFE 563
Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
++++ KG PD +Y LI G C G E + + +LN I Y+ LL C
Sbjct: 564 FLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFC 623
Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
+ G+++EAL + EM G+ DLV Y +LI G K L EM + + P+
Sbjct: 624 REGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDV 683
Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
+ +++ + EA +D +I C+ + V Y +I+G K G + EA L ++
Sbjct: 684 IYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM 743
Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRL-LDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
P+ VT+ + K G+V + + L L GL + TY + +C +G
Sbjct: 744 QPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGR 802
Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
I+ L+ M + P +TYT +I LC++ +++A++L M G+ PD++ YNT
Sbjct: 803 IEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNT 862
Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
+I C ++ KA +L N+M L P + T
Sbjct: 863 LIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/483 (23%), Positives = 208/483 (43%), Gaps = 68/483 (14%)
Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV--------------- 274
L +GF + ++ +L+ ++ K+ A LL + LKP V
Sbjct: 96 LHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSS 155
Query: 275 --TYSILIRGLCKQDKVHKAI------------------------------------QLY 296
++ +LI+ + +V + +L+
Sbjct: 156 SSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELF 215
Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
N+M S I P+ + + ++ LCE + ++ A+ + + C ++V YN++IDG K
Sbjct: 216 NDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKK 275
Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
+ EAV + + L K + P +VT+ +L+YG CK + ++D + PS
Sbjct: 276 QKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAV 335
Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
++ + + G I+ L L++ + + P Y +I LCK K EA L + M
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGK 395
Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
IG+ P+ +TY+ +I FC+ L A L +M L+ + YN LI+G C GD+
Sbjct: 396 IGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISA 455
Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--- 593
A+ + + + T V YT+++ +C++G ++KA+ + +M KG SI +T
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS 515
Query: 594 ------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
F M P++ VM+ + + GD+ FE M + G++P
Sbjct: 516 GLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP 575
Query: 642 DKF 644
D +
Sbjct: 576 DTY 578
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 272 bits (695), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 151/534 (28%), Positives = 282/534 (52%), Gaps = 7/534 (1%)
Query: 7 SRTGM----VHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSET 59
SR G+ + DAV + +M + SI ++ LL + D++ L + ++
Sbjct: 53 SRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGI 112
Query: 60 PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
P N YT SI+I+ C++S+L A+ L + + P++V+L+++++ YC A
Sbjct: 113 PHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVA 172
Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
L M G P+ ++N LIHGL + EA+ + M G +PD +TY ++ G
Sbjct: 173 LVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLC 232
Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
A+ ++ K+ +P ++ Y +I G C+ ++++ L L + M ++G + NV+
Sbjct: 233 KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVV 292
Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
YS L+S +C GR +A LL +M + PD+ T+S LI K+ K+ +A +LY+EM
Sbjct: 293 TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
+ I P+ + +++ G C + + EA+ F+ ++ +C DVV YN +I G+ K +
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 412
Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
E ++++R++ ++ + + VT+N LI G + G A+ + + G+ P+ +TY T
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472
Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
++ C+ G +++ + + + ++ + PT TY ++I+G+CK K+++ L ++ + GV
Sbjct: 473 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 532
Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
PD + YNT+I FC+ +A L +M P S YN LI +GD
Sbjct: 533 KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 586
Score = 269 bits (687), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 152/520 (29%), Positives = 272/520 (52%), Gaps = 1/520 (0%)
Query: 64 YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
Y + +GL + +L DA+ E PS++ + ++S K+ +V L
Sbjct: 48 YREKLSRNGL-SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQ 106
Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
M G+ + ++Y+ILI+ C + AL M + G EP+ +T S L G+ +
Sbjct: 107 MQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 166
Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
IS A ++ ++ + G P+ VT+ LI G E + L + M+++G + +++ Y V
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 226
Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
+++ +CK G D A LL +ME L+P ++ Y+ +I GLCK + A+ L+ EM +K
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 286
Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
I PN + +++ LC ++A +I DV ++ +ID +VK G + EA
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346
Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
+LY +++++ I PSIVT++SLI GFC + ++ +A+++ + + P VTY T + +
Sbjct: 347 KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 406
Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
C+ ++ + + +EM + + VTY ++I+GL + A ++ ++M GV P+
Sbjct: 407 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 466
Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
+TYNT++ CK L KA + + +EPT TYNI+I+G+C G +++ L +
Sbjct: 467 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN 526
Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
L + VAY T+I C +G +A F +M E G
Sbjct: 527 LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566
Score = 249 bits (637), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 152/541 (28%), Positives = 256/541 (47%), Gaps = 15/541 (2%)
Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
A LF M+K P ++ L+ + + + M G+ + TYSIL
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
F SQ+ A V+ K++ G +P+IVT + L+ GYC + E + L + M G++
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
N + ++ L+ + + EA+ L+ M A G +PDLVTY +++ GLCK+ A L
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
N+M ++ P + I+ GLC+ + + +A F + +VV Y+ +I
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
G +A +L +IE++I+P + TF++LI F K GK+ +A +L D + ++PS VTY
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364
Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
++ +N +C + + + M +K P VTY +IKG CK +++E +++ +M
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 424
Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
G+ + +TYN +I+ + D A ++ +M + P TYN L+DGLC NG L+
Sbjct: 425 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 484
Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--S 594
A + LQ + T Y +I+ C G V FC + KG + + Y S
Sbjct: 485 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMIS 544
Query: 595 FFCM-------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
FC M +G P+ ++ A + GD + EL M G
Sbjct: 545 GFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAG 604
Query: 642 D 642
D
Sbjct: 605 D 605
Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 128/483 (26%), Positives = 242/483 (50%), Gaps = 3/483 (0%)
Query: 6 YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
+ R + A+ V+ KM +L + +I T +SLL H+ + + L D + V+ N
Sbjct: 126 FCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPN 185
Query: 63 VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
T + +I GL ++ +A+ + K P +V+ +++ CK G ++A L
Sbjct: 186 TVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLN 245
Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
M + L P YN +I GLC M++AL +M G+ P+ +TYS L
Sbjct: 246 KMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 305
Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
+ S A +++ ++ + +PD+ T++ LI + + G + E KL + M+ + +++ YS
Sbjct: 306 RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365
Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
L++ C R+DEA + M + PD+VTY+ LI+G CK +V + ++++ EM +
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 425
Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
+ N+ + ++ GL + A+ F ++ +++ YN ++DG K G + +A
Sbjct: 426 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
+ ++ L ++ P+I T+N +I G CK GKV D L + L G++P V Y T ++
Sbjct: 486 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG 545
Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
+C +G+ + AL +EM+ P Y +I+ + + + +L+++M G D
Sbjct: 546 FCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605
Query: 483 QIT 485
T
Sbjct: 606 AST 608
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 211/436 (48%), Gaps = 16/436 (3%)
Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
E++ S+ F ++I +S LLS++ K + D + L +M+ +G+ + TYSILI C++
Sbjct: 71 EMVKSRPFP-SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRR 129
Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
++ A+ + +M PN ++L G C + I+EA D + ++ + V +
Sbjct: 130 SQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTF 189
Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
N +I G EA+ L +++ K P +VT+ ++ G CK G A LL+ ++
Sbjct: 190 NTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ 249
Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
LEP + Y T ++ C+ ++ L L +EMETK I P VTY+ +I LC + +
Sbjct: 250 GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD 309
Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
A +LL DM + PD T++ +I +F K L +A +L ++M +++P+ TY+ LI+
Sbjct: 310 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 369
Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG--- 583
G C++ L A + + + V Y T+IK C V + M F +M ++G
Sbjct: 370 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 429
Query: 584 ------------FEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
F+ D + F M+S+G PP+ +L + G L +
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 489
Query: 632 AVMIKSGLLPDKFLIN 647
+ +S + P + N
Sbjct: 490 EYLQRSKMEPTIYTYN 505
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 136/298 (45%), Gaps = 15/298 (5%)
Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
+ +AV L+ ++++ R PSI+ F+ L+ K K L + ++ G+ + TY+
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
+N +C + LA+L +M P VT + ++ G C ++ EAV L++ M+V G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
P+ +T+NT+I +A L+++M +P TY ++++GLC GD A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
LL +++ + + Y TII C + A+ F +M KG ++ Y+ C+
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 599 ---------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
M+ PD ++ AF + G L +L M+K + P
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Score = 66.6 bits (161), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 30 SIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
+I TYN+LL L + +++ ++ S+ +YT +I+I+G+C+ +++D
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 87 QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
+ K P VV+ N ++S +C+ G E A LF M + G P++ YN LI
Sbjct: 525 CNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRD 584
Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
G E + E +M G DA T ++ H
Sbjct: 585 GDREASAELIKEMRSCGFAGDASTIGLVTNMLH 617
Score = 37.4 bits (85), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 74/202 (36%), Gaps = 15/202 (7%)
Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
+ KL +AV L +M P I ++ ++ + K L QM + T
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
Y+ILI+ C L A +L + + V ++++ +C + +A+ QM
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 581 EKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLG 625
G++ + + + M++ G PD V++ + GD
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 626 SVFELAAVMIKSGLLPDKFLIN 647
F L M + L P + N
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYN 260
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 270 bits (690), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 179/665 (26%), Positives = 317/665 (47%), Gaps = 23/665 (3%)
Query: 1 MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT--DI-MWDLYDDIKVS 57
+L VY R GM+ D++ + M S+ T N++L ++ + D+ +W ++
Sbjct: 128 ILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKR 187
Query: 58 ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
+ +V T +I+I+ LC + + + +Q+ + P++V+ N ++ YCK G + A
Sbjct: 188 KICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAA 247
Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
L M G+ D +YN+LIH LC + + + DM + + P+ +TY+ L G
Sbjct: 248 IELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLING 307
Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
F ++ A +++ ++L G P+ VT+ LI G+ GN +E LK+ +M ++G +
Sbjct: 308 FSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPS 367
Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
++Y VLL +CK+ D A G M+ G+ +TY+ +I GLCK + +A+ L N
Sbjct: 368 EVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLN 427
Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
EM I P+ + A++ G C+ A+ + + ++Y+ +I ++G
Sbjct: 428 EMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 487
Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
+ EA+++Y +I + + TFN L+ CK GKVA+A + + G+ P+ V++
Sbjct: 488 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD 547
Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
+N Y G + ++ EM PT TY ++KGLCK L+EA + L+ ++ +
Sbjct: 548 CLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAV 607
Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
D + YNT++ + CK +L KA L +M ++ P S TY LI GLC G K
Sbjct: 608 PAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG--KTV 665
Query: 538 DCLLVSLQEH---NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR----- 589
+L + + N+ KV YT + G + F QM G I
Sbjct: 666 IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 725
Query: 590 ----------DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
+ T M + P+ ++L + + D+ + F L +I +G+
Sbjct: 726 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 785
Query: 640 LPDKF 644
LPDK
Sbjct: 786 LPDKL 790
Score = 219 bits (559), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 136/538 (25%), Positives = 256/538 (47%), Gaps = 16/538 (2%)
Query: 123 LMLKYGL-HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
LM Y L + + Y+ILI G ++++LE MG +G P T + +
Sbjct: 112 LMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKS 171
Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
+ W ++++L + PD+ T+ +LI C G+ E+ L + M G+ ++ Y
Sbjct: 172 GEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTY 231
Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
+ +L CK GR A+ LL M++ G+ D+ TY++LI LC+ +++ K L +M
Sbjct: 232 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 291
Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
+ I PN + ++ G + + A + ++ + V +N +IDG++ GN E
Sbjct: 292 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 351
Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
A++++ + K ++PS V++ L+ G CKN + AR +K +G+ +TYT ++
Sbjct: 352 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 411
Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
C+ G + + LL EM I P VTY+ +I G CK + + A +++ +Y +G++P
Sbjct: 412 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 471
Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
+ I Y+T+I + C+ L++A ++ M L T+N+L+ LC G + A+ +
Sbjct: 472 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 531
Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY---------- 591
+ I V++ +I + G+ KA + F +M + G + Y
Sbjct: 532 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 591
Query: 592 -----TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
+ F + + D + +L A + G+L L M++ +LPD +
Sbjct: 592 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 649
Score = 213 bits (542), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 158/636 (24%), Positives = 283/636 (44%), Gaps = 59/636 (9%)
Query: 61 RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
R YT +IDGLC+ L +A++ L E + P +V+ +A+++ +CK+G + AK +
Sbjct: 403 RITYTG--MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 460
Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
C + + GL P+ Y+ LI+ C G ++EA+ M G D T+++L
Sbjct: 461 VCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCK 520
Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV---MLSQGFKLN 237
+++ A + ++ + G P+ V++ LI GY GN EGLK V M G
Sbjct: 521 AGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY---GNSGEGLKAFSVFDEMTKVGHHPT 577
Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
Y LL +CK G + EA L + AV D V Y+ L+ +CK + KA+ L+
Sbjct: 578 FFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFG 637
Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMY----------FDSLIMSNCI------- 340
EM + I P+S+ + +++ GLC K A ++ + +M C
Sbjct: 638 EMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKA 697
Query: 341 -------------------QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
D+V N MIDGY ++G I + L ++ + P++ T+
Sbjct: 698 GQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTY 757
Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
N L++G+ K V+ + L +I L+G+ P +T + + CE ++ L +L+
Sbjct: 758 NILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFIC 817
Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
+ + T+ ++I C ++ A L++ M +G++ D+ T + ++ + ++
Sbjct: 818 RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQE 877
Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
+ +L++M + P S Y LI+GLC GD+K A + + H I VA + +++
Sbjct: 878 SRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVR 937
Query: 562 AHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPP 606
A G +A M++ +I +T +M + G
Sbjct: 938 ALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKL 997
Query: 607 DQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
D V++ GD+ FEL M G L +
Sbjct: 998 DLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLAN 1033
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 140/623 (22%), Positives = 265/623 (42%), Gaps = 40/623 (6%)
Query: 6 YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
+ + G A ++ ++ + L + Y++L+YN + + +Y+ + + R+
Sbjct: 448 FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 507
Query: 63 VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
+T ++++ LC+ ++ +A F++ P+ VS + +++ Y G A +F
Sbjct: 508 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 567
Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
M K G HP F+Y L+ GLC G + EA +F + D + Y+ L
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 627
Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV----------------------- 219
++ A + +++ + PD TYT LI G C+ G
Sbjct: 628 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 687
Query: 220 -------------EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
+ G+ RE M + G +++ + ++ + G+I++ LL EM
Sbjct: 688 TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 747
Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
P+L TY+IL+ G K+ V + LY + I P+ +++LG+CE M+
Sbjct: 748 QNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEI 807
Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
+ I D +N++I G I A L + + IS T ++++
Sbjct: 808 GLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVS 867
Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
+N + ++R +L + G+ P + Y +N C G+I+ + +EM I P
Sbjct: 868 VLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP 927
Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
+V + +++ L K K EA LL M + + P ++ T++ CK ++ +A +L
Sbjct: 928 PNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELR 987
Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA- 565
M L+ +YN+LI GLC GD+ A L ++ Y +I+ A
Sbjct: 988 VVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLAR 1047
Query: 566 EGDVHKAMTFFCQMVEKGFEISI 588
E A ++ +GF S+
Sbjct: 1048 ETAFSGADIILKDLLARGFITSM 1070
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 270 bits (689), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 154/506 (30%), Positives = 254/506 (50%)
Query: 78 RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
++ DAI + P+ + N + S + ++ G M G+ D ++
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
I+I+ C + A + G EPD IT+S L GF L ++S A ++ +++
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
PD+VT + LI G C G V E L L + M+ GF+ + + Y +L+ +CKSG A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
L L +ME +K +V YSI+I LCK A+ L+NEM K I + + +++ G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
LC + +I N I DVV ++ +ID +VK G + EA +LY ++I + I+P
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
+T+NSLI GFCK + +A ++ D + G EP VTY+ +N+YC+ + + L +
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
E+ +K + P +TY ++ G C+ KL A +L ++M GV P +TY ++ C
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
+L KA ++ +M + YNI+I G+C + +A L SL + + V Y
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529
Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKG 583
+I C +G + +A F +M E G
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKEDG 555
Score = 267 bits (682), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/486 (31%), Positives = 242/486 (49%), Gaps = 12/486 (2%)
Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
K G PD +++ L++G C+ G + EA+ + M PD +T S L G L ++S
Sbjct: 133 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 192
Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
A +I +++ G PD VTY ++ C+ GN L L M + K +V+ YS+++
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
S+CK G D+AL L EME G+K D+VTYS LI GLC K ++ EM + I
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
P+ A++ ++ + EA+ ++ +I D + YN +IDG+ K + EA Q+
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
+ ++ K P IVT++ LI +CK +V D RL I GL P+ +TY T + +C+
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
G + L QEM ++ + P+ VTY +++ GLC +L +A+++ E M +T
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
YN II C + A+ L + ++P TYN++I GLC G L AD L ++
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE------------ISIRDYTK 593
E + Y +I+AH + ++ +M GF +S R K
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDK 612
Query: 594 SFFCMM 599
SF M+
Sbjct: 613 SFLDML 618
Score = 263 bits (671), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 143/517 (27%), Positives = 269/517 (52%), Gaps = 3/517 (0%)
Query: 12 VHDAVFVIAKM---KELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
V+DA+ + M + L + S + + D++ ++++ ++YT +I
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 69 VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
+I+ C++ +L A L + P ++ + +++ +C G A L M++
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
PD + + LI+GLC+ G + EAL + M +G +PD +TY + + A
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
+ +K+ + +V Y+++I C+ G+ ++ L L M +G K +V+ YS L+ +
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
C G+ D+ +L EM + PD+VT+S LI K+ K+ +A +LYNEM ++ I+P++
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
+ +++ G C++ + EA FD ++ C D+V Y+I+I+ Y K + + ++L+R+
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
+ K + P+ +T+N+L+ GFC++GK+ A+ L + G+ PS VTY ++ C+ G
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470
Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
+ + L + ++M+ + Y ++I G+C K+ +A L + GV PD +TYN
Sbjct: 471 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 530
Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
+I CK L +A L +M P TYNILI
Sbjct: 531 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Score = 229 bits (583), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 232/437 (53%), Gaps = 1/437 (0%)
Query: 54 IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
+++ + P ++ T S +I+GLC + R+ +A++ + F P V+ +++R CK G
Sbjct: 167 VEMKQRP-DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 225
Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
+ +A LF M + + Y+I+I LC GS ++AL N+M G++ D +TYS
Sbjct: 226 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 285
Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
L G + K++++++ + PD+VT++ LI + + G + E +L M+++G
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
+ I Y+ L+ CK + EA + M + G +PD+VTYSILI CK +V +
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 405
Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
+L+ E+ SK + PN+ + ++LG C+ + A+ F ++ VV Y I++DG
Sbjct: 406 RLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL 465
Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
G + +A++++ ++ + R++ I +N +I+G C KV DA L ++ G++P
Sbjct: 466 CDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDV 525
Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
VTY + C++G++ L ++M+ P TY ++I+ L +V+L+E+
Sbjct: 526 VTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEE 585
Query: 474 MYVIGVTPDQITYNTII 490
M V G + D T +I
Sbjct: 586 MKVCGFSADSSTIKMVI 602
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 209/409 (51%), Gaps = 3/409 (0%)
Query: 10 GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
G V +A+ +I +M E + TY +L L ++ + DL+ ++ +V
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 248
Query: 67 SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
SIVID LC+ DA+ E K VV+ ++++ C G + + M+
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
+ PD +++ LI G + EA E N+M G+ PD ITY+ L GF + +
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368
Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
A ++ ++ KG +PDIVTY++LI YC+ V++G++L + S+G N I Y+ L+
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 428
Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
C+SG+++ A L EM + G+ P +VTY IL+ GLC +++KA++++ +M R++
Sbjct: 429 GFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL 488
Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
+ I+ G+C + +A F SL DVV YN+MI G K G++ EA L+
Sbjct: 489 GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF 548
Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
R++ E +P T+N LI + + L++ +K+ G + T
Sbjct: 549 RKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSST 597
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 174/362 (48%), Gaps = 32/362 (8%)
Query: 8 RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
+ G DA+ + +M+ +K + TY+SL
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSL------------------------------ 286
Query: 68 IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
I GLC + D L+E G+ P VV+ +A++ + K G AK L+ M+
Sbjct: 287 --IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR 344
Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
G+ PD +YN LI G C + EA + + M G EPD +TYSIL + ++
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 404
Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
++ +++ KG P+ +TY L+ G+CQ G + +L + M+S+G +V+ Y +LL
Sbjct: 405 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
+C +G +++AL + +M+ + + Y+I+I G+C KV A L+ + K + P+
Sbjct: 465 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 524
Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
+ ++ GLC+K ++EA M F + C D YNI+I ++ + +V+L
Sbjct: 525 VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIE 584
Query: 368 QL 369
++
Sbjct: 585 EM 586
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 134/282 (47%), Gaps = 9/282 (3%)
Query: 5 VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN------LRHTDIMWDLYDDIKVSE 58
V+ + G + +A + +M + TYNSL+ L + M+DL +
Sbjct: 324 VFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM--VSKGC 381
Query: 59 TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
P ++ T SI+I+ C+ R+ D + +E + K P+ ++ N ++ +C+ G AK
Sbjct: 382 EP-DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440
Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
LF M+ G+ P +Y IL+ GLC G + +ALE M + + Y+I+ G
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 500
Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
S++ AW + L KG PD+VTY V+I G C+ G++ E L M G +
Sbjct: 501 CNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 560
Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILI 280
Y++L+ + + ++ L+ EM+ G D T ++I
Sbjct: 561 FTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 602
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 114/253 (45%), Gaps = 5/253 (1%)
Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
IQ ++ N + ++ G ++ Y + E ++S N ++ + KV DA
Sbjct: 2 IQRLIPLNRKASNFTQILEKGTSLLHYSSITEAKLSYKERLRNGIV-----DIKVNDAID 56
Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
L +++ P+ + + +A +L + ME I T T++I C
Sbjct: 57 LFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYC 116
Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
++ KL A +L + +G PD IT++T++ FC + +A L+++M P
Sbjct: 117 RKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLV 176
Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
T + LI+GLC+ G + A L+ + E+ +V Y ++ C G+ A+ F +M
Sbjct: 177 TVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM 236
Query: 580 VEKGFEISIRDYT 592
E+ + S+ Y+
Sbjct: 237 EERNIKASVVQYS 249
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 269 bits (688), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 170/603 (28%), Positives = 286/603 (47%), Gaps = 44/603 (7%)
Query: 8 RTGMVH----DAVFVIAKMKELDLKVSIQTYN---SLLYNLRHTDIMWDLYDDIKVSETP 60
R+G+V DAV + +M + + ++ S++ + D++ DL +++
Sbjct: 45 RSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIA 104
Query: 61 RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
N+YT SI+I+ C+ +L L F+ + K
Sbjct: 105 HNLYTLSIMINCCCRCRKLS------------------------------LAFSAMGK-- 132
Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
++K G PD +++ LI+GLC+ G + EALE + M G +P IT + L G L
Sbjct: 133 ---IIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
++S A +I +++ G P+ VTY ++ C+ G ++L M + KL+ +
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
YS+++ +CK G +D A L EME G K D++ Y+ LIRG C + +L +M
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
++I+P+ A A++ ++ + EA +I D V Y +IDG+ K +
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
+A + ++ K P+I TFN LI G+CK + D L + L G+ VTY T +
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
+CE G ++ L QEM ++ + P V+Y +++ GLC + ++A+++ E + +
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
D YN II C + A+ L + L ++P TYNI+I GLC G L AD L
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLL 549
Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMML 600
++E S Y +I+AH EGD K+ ++ GF S+ T ML
Sbjct: 550 FRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGF--SVDASTVKMVVDML 607
Query: 601 SNG 603
S+G
Sbjct: 608 SDG 610
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/526 (26%), Positives = 252/526 (47%), Gaps = 20/526 (3%)
Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
A LF M + P ++ L + + L+ M G+ + T SI+
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
++S A+ + K++ G +PD VT++ LI G C G V E L+L + M+ G K
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
+I + L++ +C +G++ +A+ L+ M G +P+ VTY +++ +CK + A++L
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
+M ++I ++ + I+ GLC+ + A F+ + + D+++Y +I G+
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295
Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
G + +L R +I+++I+P +V F++LI F K GK+ +A L + G+ P VTY
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355
Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
T+ ++ +C+E + + +L M +K GP T+ ++I G CK + + ++L M +
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415
Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
GV D +TYNT+I+ FC+ L A +L +M + P +Y IL+DGLC NG+ +
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475
Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFF 596
A + +++ + L Y II C V A FC +
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP---------------- 519
Query: 597 CMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
G PD + +M+ + G L L M + G P+
Sbjct: 520 ----LKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPN 561
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 269 bits (687), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 147/488 (30%), Positives = 262/488 (53%), Gaps = 3/488 (0%)
Query: 62 NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
+V T +++I LC+ +L+ AIL L++ P + +M Y + G + A +
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH-GVEPDAITYSILAKGFHL 180
M+++G S N+++HG C G +E+AL F +M G PD T++ L G
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
+ A +++ +L +G DPD+ TY +I G C++G V+E +++ + M+++ N +
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367
Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
Y+ L+S++CK +++EA L + + G+ PD+ T++ LI+GLC A++L+ EM
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427
Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
SK P+ F + ++ LC K + EA + +S C + V+ YN +IDG+ K
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 487
Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
EA +++ ++ +S + VT+N+LI G CK+ +V DA +L+D + + G +P TY + +
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547
Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
+C G+I++ ++Q M + P VTY +I GLCK +++ A +LL + + G+
Sbjct: 548 THFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIN 607
Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA-TYNILIDGLCV-NGDLKNAD 538
YN +I+ + + +A L +M N P A +Y I+ GLC G ++ A
Sbjct: 608 LTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAV 667
Query: 539 CLLVSLQE 546
LV L E
Sbjct: 668 DFLVELLE 675
Score = 268 bits (686), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 165/602 (27%), Positives = 299/602 (49%), Gaps = 24/602 (3%)
Query: 45 DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG--PSVVSLN 102
D M + +D+K S T I+I+ Q LQD IL + + EFG P N
Sbjct: 100 DDMKKILEDMKSSRCEMGTSTFLILIESYAQ-FELQDEILSVVDWMIDEFGLKPDTHFYN 158
Query: 103 AIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH 162
+++ ++ + M +G+ PD ++N+LI LC A + A+ DM +
Sbjct: 159 RMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSY 218
Query: 163 GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
G+ PD T++ + +G+ + GA ++ ++++ G V+ V++ G+C+ G VE+
Sbjct: 219 GLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDA 278
Query: 223 LKLREVMLSQ-GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
L + M +Q GF + ++ L++ +CK+G + A+ ++ M G PD+ TY+ +I
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVIS 338
Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
GLCK +V +A+++ ++M ++ SPN+ + ++ LC++ + EA L +
Sbjct: 339 GLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 398
Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
DV +N +I G N A++L+ ++ K P T+N LI C GK+ +A +L
Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML 458
Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
++L G S +TY T ++ +C+ + + EME + VTY +I GLCK
Sbjct: 459 KQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS 518
Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
++++A QL++ M + G PD+ TYN+++ FC+ D++KA ++ M + EP TY
Sbjct: 519 RRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578
Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
LI GLC G ++ A LL S+Q I+LT AY +I+ + +A+ F +M+E
Sbjct: 579 GTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638
Query: 582 KGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAF-HQGGDLGSVFELAAVMIKSGLL 640
+ N PPD ++ + GG + + +++ G +
Sbjct: 639 Q-------------------NEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFV 679
Query: 641 PD 642
P+
Sbjct: 680 PE 681
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 154/368 (41%), Gaps = 25/368 (6%)
Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKR--ISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
L+ L Q A++L+N + SK+ SP + ILL L + + + +
Sbjct: 53 LLDSLRSQPDDSAALRLFN-LASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKS 111
Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK-RISPSIVTFNSLIYGFCKNGKVA 395
S C + I+I+ Y + E + + +I++ + P +N ++ +
Sbjct: 112 SRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLK 171
Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
+ + G++P T+ + A C ++ + +L++M + + P T+T V+
Sbjct: 172 LVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVM 231
Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN-L 514
+G ++ L A+++ E M G + ++ N I+ FCK + A + +M +
Sbjct: 232 QGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGF 291
Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
P T+N L++GLC G +K+A ++ + + Y ++I C G+V +A+
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE 351
Query: 575 FFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVM 634
QM+ RD + P+ ++ + + ELA V+
Sbjct: 352 VLDQMI-------TRDCS-------------PNTVTYNTLISTLCKENQVEEATELARVL 391
Query: 635 IKSGLLPD 642
G+LPD
Sbjct: 392 TSKGILPD 399
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 112/274 (40%), Gaps = 20/274 (7%)
Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
SP + ++ ++G D +++L+ +K E T+ + +Y + +L+
Sbjct: 80 SPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILS 139
Query: 435 LLQEM-ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
++ M + + P Y ++ L L+ M V G+ PD T+N +I++
Sbjct: 140 VVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKAL 199
Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
C+ LR A +L M + L P T+ ++ G GDL A + + E S +
Sbjct: 200 CRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSN 259
Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEV 613
V+ I+ C EG V A+ F +M + +GF PDQ
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQ-------------------DGFFPDQYTFNT 300
Query: 614 MLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
++ + G + E+ VM++ G PD + N
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYN 334
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 111/264 (42%), Gaps = 40/264 (15%)
Query: 10 GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
G + +A+ ++ +M+ S+ TYN+L+ T +++D+++V RN T
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508
Query: 67 SIVIDGLCQQSRLQDAILFL-----------------------------------QETAG 91
+ +IDGLC+ R++DA + Q
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568
Query: 92 KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
P +V+ ++S CK G EVA L + G++ +YN +I GL E
Sbjct: 569 NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTE 628
Query: 152 ALEFTNDM-GRHGVEPDAITYSILAKGF-HLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
A+ +M ++ PDA++Y I+ +G + I A + +LL KG P+ + +L
Sbjct: 629 AINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYML 688
Query: 210 ICGYCQIGNVEEGLKLREVMLSQG 233
G + E +KL +++ +
Sbjct: 689 AEGLLTLSMEETLVKLVNMVMQKA 712
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 268 bits (686), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 170/644 (26%), Positives = 312/644 (48%), Gaps = 30/644 (4%)
Query: 6 YSRTGMVHDAVFVIAKMKELDLKVSIQTYN---SLLYNLRHTDIMWDLYDDIKVSETPRN 62
Y R G V +AV V +M D + ++ +YN S+L + + D +Y ++ +
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 63 VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
VY+ +I + C+ SR A+ L + + +VV+ ++ + + F LF
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFG 205
Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
ML G+ ++N L+ LC G ++E + + + + GV P+ TY++ +G
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265
Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
++ GA +++ L+ +G PD++TY LI G C+ +E M+++G + + Y+
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
L++ CK G + A ++ + G PD TY LI GLC + + ++A+ L+NE K
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385
Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
I PN + ++ GL + MI EA + + I +V +NI+++G K+G + +A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
L + +I K P I TFN LI+G+ K+ +A +LD + +G++P TY + +N
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505
Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
C+ + ++ + M K P T+ ++++ LC+ KL EA+ LLE+M V PD
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPD 565
Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMW-LHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
+T+ T+I FCK DL A+ L +M + + ++ TYNI+I ++ A+ L
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLF 625
Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLS 601
+ + + Y ++ C G+V+ F +M+E GF S+ + C+ +
Sbjct: 626 QEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVE 685
Query: 602 NGFPPDQEICEVMLIAFHQGGDLGSVFELAAV---MIKSGLLPD 642
+ V+E A + M++ GL+P+
Sbjct: 686 D-----------------------RVYEAAGIIHRMVQKGLVPE 706
Score = 251 bits (640), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 160/642 (24%), Positives = 305/642 (47%), Gaps = 26/642 (4%)
Query: 23 KELDLKVSIQTYNSLLYNLRH-------TDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQ 75
KE+ K ++ TY S++ L + +++ D+ +++ + VY ++ G +
Sbjct: 32 KEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVG-NHMLEGVYVGAMKNYG--R 88
Query: 76 QSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFS 135
+ ++Q+A+ + + P+V S NAIMS G+ + A ++ M G+ PD +S
Sbjct: 89 KGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYS 148
Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
+ I + C AL N+M G E + + Y + GF+ + + +++ K+L
Sbjct: 149 FTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKML 208
Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
G + T+ L+ C+ G+V+E KL + ++ +G N+ Y++ + +C+ G +D
Sbjct: 209 ASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELD 268
Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
A+ ++ + G KPD++TY+ LI GLCK K +A +M ++ + P+S+ + ++
Sbjct: 269 GAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLI 328
Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
G C+ M+ A + + + D Y +IDG G A+ L+ + + K I
Sbjct: 329 AGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388
Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
P+++ +N+LI G G + +A +L + + GL P T+ +N C+ G + L
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448
Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
++ M +K P T+ ++I G Q K++ A+++L+ M GV PD TYN+++ CK
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCK 508
Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
+ M P T+NIL++ LC L A LL ++ +++ V
Sbjct: 509 TSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVT 568
Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVE--------KGFEISIRDYT--------KSFFCMM 599
+ T+I C GD+ A T F +M E + I I +T + F M
Sbjct: 569 FGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEM 628
Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
+ PD +M+ F + G++ ++ M+++G +P
Sbjct: 629 VDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIP 670
Score = 209 bits (531), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 136/479 (28%), Positives = 237/479 (49%), Gaps = 15/479 (3%)
Query: 56 VSETPR-NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
+ + P+ +V T + +I GLC+ S+ Q+A ++L + + P + N +++ YCK G
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMV 337
Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
++A+ + + G PD F+Y LI GLC G AL N+ G++P+ I Y+ L
Sbjct: 338 QLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTL 397
Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
KG I A ++ ++ KG P++ T+ +L+ G C++G V + L +VM+S+G+
Sbjct: 398 IKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457
Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
++ +++L+ +++ AL +L M G+ PD+ TY+ L+ GLCK K ++
Sbjct: 458 FPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVME 517
Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
Y M K +PN F +L LC + EA + + + D V + +IDG+
Sbjct: 518 TYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFC 577
Query: 355 KLGNIGEAVQLYRQLIEK-RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
K G++ A L+R++ E ++S S T+N +I+ F + V A +L + L P
Sbjct: 578 KNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDG 637
Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
TY ++ +C+ GN+ L EM P+ T VI LC + ++ EA ++
Sbjct: 638 YTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHR 697
Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA----TYNILIDGL 528
M G+ P+ + NTI D+ K ++ L +L S Y +L DGL
Sbjct: 698 MVQKGLVPEAV--NTIC-------DVDKKEVAAPKLVLEDLLKKSCITYYAYELLFDGL 747
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/502 (25%), Positives = 228/502 (45%), Gaps = 26/502 (5%)
Query: 148 SMEEAL-EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
+MEE L + ++G H +E Y K + ++ A V +++ +P + +Y
Sbjct: 58 AMEEVLVDMRENVGNHMLEG---VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSY 114
Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
++ G ++ K+ M +G +V ++++ + S CK+ R AL LL M +
Sbjct: 115 NAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSS 174
Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
G + ++V Y ++ G +++ + +L+ +M + +S +L LC+K + E
Sbjct: 175 QGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKE 234
Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
D +I + ++ YN+ I G + G + AV++ LIE+ P ++T+N+LIY
Sbjct: 235 CEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIY 294
Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
G CKN K +A L + GLEP + TY T + YC+ G +Q ++ + P
Sbjct: 295 GLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVP 354
Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
TY +I GLC + + A+ L + G+ P+ I YNT+I+ + +A QL
Sbjct: 355 DQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLA 414
Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
N+M L P T+NIL++GLC G + +AD L +K ++
Sbjct: 415 NEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL-------------------VKVMISK 455
Query: 567 GDVHKAMTFFCQMVEKGFEISIR-DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLG 625
G TF ++ G+ ++ + +ML NG PD +L +
Sbjct: 456 GYFPDIFTF--NILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFE 513
Query: 626 SVFELAAVMIKSGLLPDKFLIN 647
V E M++ G P+ F N
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFN 535
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 217/447 (48%), Gaps = 4/447 (0%)
Query: 8 RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD--LYDDIKVSET-PRNVY 64
+ G + AV ++ + E K + TYN+L+Y L + +Y V+E + Y
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322
Query: 65 TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
T + +I G C+ +Q A + + F P + +++ C G A LF
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382
Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
L G+ P+ YN LI GL G + EA + N+M G+ P+ T++IL G + +
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCV 442
Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
S A +++ ++ KG PDI T+ +LI GY +E L++ +VML G +V Y+ L
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSL 502
Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
L+ +CK+ + ++ + M G P+L T++IL+ LC+ K+ +A+ L EM +K +
Sbjct: 503 LNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562
Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV-LYNIMIDGYVKLGNIGEAV 363
+P++ G ++ G C+ + A F + + + YNI+I + + N+ A
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAE 622
Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
+L+++++++ + P T+ ++ GFCK G V + L + +G PS T +N
Sbjct: 623 KLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCL 682
Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVT 450
C E + ++ M K + P V
Sbjct: 683 CVEDRVYEAAGIIHRMVQKGLVPEAVN 709
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 157/357 (43%), Gaps = 46/357 (12%)
Query: 7 SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP---RNV 63
S GM+ +A + +M E L +QT+N L+ L + D +KV + ++
Sbjct: 402 SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461
Query: 64 YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
+T +I+I G Q ++++A+ L P V + N++++ CK E +
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521
Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
M++ G P+ F++NIL+ LC ++EAL +M V PDA+T+ L GF
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
Query: 184 ISGAW------------------------------------KVIQKLLIKGSDPDIVTYT 207
+ GA+ K+ Q+++ + PD TY
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641
Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
+++ G+C+ GNV G K M+ GF ++ +++ +C R+ EA G+++ M
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Query: 268 GLKPDLVTYSILIRGLCKQDKVH-KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
GL P+ V +C DK A +L E K+ +A+ + GL +K +
Sbjct: 702 GLVPEAVN------TICDVDKKEVAAPKLVLEDLLKKSCITYYAYELLFDGLRDKRL 752
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 268 bits (685), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 161/528 (30%), Positives = 275/528 (52%), Gaps = 18/528 (3%)
Query: 10 GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDD----IKVSETPR---- 61
G++ +A V KM L +S+ + N L L D Y I E P
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSK-----DCYKTATAIIVFREFPEVGVC 243
Query: 62 -NVYTNSIVIDGLCQQSRLQDA--ILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
NV + +IVI +CQ R+++A +L L E G + P V+S + +++ YC+ G +
Sbjct: 244 WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG--YTPDVISYSTVVNGYCRFGELDKVW 301
Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
L +M + GL P+++ Y +I LC + EA E ++M R G+ PD + Y+ L GF
Sbjct: 302 KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGF 361
Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
I A K ++ + PD++TYT +I G+CQIG++ E KL M +G + +
Sbjct: 362 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 421
Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
+ ++ L++ CK+G + +A + M G P++VTY+ LI GLCK+ + A +L +E
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
M + PN F + +I+ GLC+ I EA + D V Y ++D Y K G
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
+ +A ++ ++++ K + P+IVTFN L+ GFC +G + D +LL+ + G+ P+A T+ +
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
+ YC N++ A+ ++M ++ +GP TY ++KG CK ++EA L ++M G
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
+ TY+ +I+ F K K +A ++ +QM L ++ D
Sbjct: 662 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
Score = 253 bits (646), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 149/512 (29%), Positives = 256/512 (50%), Gaps = 3/512 (0%)
Query: 97 SVVSLNAIMSRYCKLGF-AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
SV S N ++R K + A +F + G+ + SYNI+IH +C G ++EA
Sbjct: 209 SVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHL 268
Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
M G PD I+YS + G+ ++ WK+I+ + KG P+ Y +I C+
Sbjct: 269 LLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCR 328
Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
I + E + M+ QG + + Y+ L+ CK G I A YEM + + PD++T
Sbjct: 329 ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLT 388
Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
Y+ +I G C+ + +A +L++EM K + P+S ++ G C+ + +A + +I
Sbjct: 389 YTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 448
Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
+ C +VV Y +IDG K G++ A +L ++ + + P+I T+NS++ G CK+G +
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
+A +L+ + GL VTYTT M+AYC+ G + + +L+EM K + PT VT+ V++
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
G C L++ +LL M G+ P+ T+N++++ +C +L+ A + M +
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628
Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
P TY L+ G C ++K A L ++ S++ Y+ +IK +A
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Query: 576 FCQMVEKGFEISIRDYTKSFFCMMLSNGFPPD 607
F QM +G + FF G PD
Sbjct: 689 FDQMRREGLAADKEIF--DFFSDTKYKGKRPD 718
Score = 249 bits (636), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 150/548 (27%), Positives = 264/548 (48%), Gaps = 20/548 (3%)
Query: 92 KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGL---CIAGS 148
K++G + G A+ +F ML YGL S N+ + L C +
Sbjct: 169 KDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA 228
Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
A+ + GV + +Y+I+ L +I A ++ + +KG PD+++Y+
Sbjct: 229 T--AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYST 286
Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
++ GYC+ G +++ KL EVM +G K N Y ++ +C+ ++ EA EM G
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
+ PD V Y+ LI G CK+ + A + + EM S+ I+P+ + AI+ G C+ + EA
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
F + D V + +I+GY K G++ +A +++ +I+ SP++VT+ +LI G
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
CK G + A LL + GL+P+ TY + +N C+ GNI+ + L+ E E +
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
VTYT ++ CK ++ +A ++L++M G+ P +T+N ++ FC L +LLN
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
M + P + T+N L+ C+ +LK A + + + Y ++K HC +
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 569 VHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEV 613
+ +A F +M KGF +S+ Y+ + F M G D+EI +
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDF 706
Query: 614 MLIAFHQG 621
++G
Sbjct: 707 FSDTKYKG 714
Score = 149 bits (375), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 175/369 (47%), Gaps = 3/369 (0%)
Query: 6 YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
+ + G + A +M D+ + TY +++ M + L+ ++ +
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 63 VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
T + +I+G C+ ++DA P+VV+ ++ CK G + A L
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 480
Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
M K GL P+ F+YN +++GLC +G++EEA++ + G+ D +TY+ L +
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
++ A ++++++L KG P IVT+ VL+ G+C G +E+G KL ML++G N ++
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
L+ C + A + +M + G+ PD TY L++G CK + +A L+ EM K
Sbjct: 601 SLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
S + + ++ G +++ EAR FD + D +++ D K
Sbjct: 661 GFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTI 720
Query: 363 VQLYRQLIE 371
V ++IE
Sbjct: 721 VDPIDEIIE 729
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 113/254 (44%), Gaps = 25/254 (9%)
Query: 392 GKVADARRLLDTIKLHGLEPSAVT---YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
G + +ARR+ + + +GL S + Y T ++ C + + + +E +
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYK--TATAIIVFREFPEVGVCWNV 246
Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
+Y +VI +C+ +++EA LL M + G TPD I+Y+T++ +C+ +L K ++L+
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
M L+P S Y +I LC L A+ + I V YTT+I C GD
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 569 VHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVF 628
+ A FF +E+ RD T PD ++ F Q GD+
Sbjct: 367 IRAASKFF-------YEMHSRDIT-------------PDVLTYTAIISGFCQIGDMVEAG 406
Query: 629 ELAAVMIKSGLLPD 642
+L M GL PD
Sbjct: 407 KLFHEMFCKGLEPD 420
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 268 bits (685), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 149/525 (28%), Positives = 281/525 (53%), Gaps = 3/525 (0%)
Query: 12 VHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
V DAV + M + SI +N LL + +++ L + ++ ++YT SI
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 69 VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
I+ C++S+L A+ L + + P +V+L+++++ YC A L M++ G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
PD F++ LIHGL + EA+ + M + G +PD +TY + G I A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
+++K+ + D+V Y +I G C+ ++++ L L M ++G + +V YS L+S +
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
C GR +A LL +M + P++VT+S LI K+ K+ +A +LY+EM + I P+
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
F + +++ G C + + EA+ F+ +I +C +VV Y+ +I G+ K + E ++L+R+
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423
Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
+ ++ + + VT+ +LI+GF + +A+ + + G+ P+ +TY ++ C+ G
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483
Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
+ + + + + ++ + P TY ++I+G+CK K+++ +L ++ + GV+P+ I YNT
Sbjct: 484 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNT 543
Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
+I FC+ +A LL +M P S TYN LI +GD
Sbjct: 544 MISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588
Score = 265 bits (676), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 149/506 (29%), Positives = 262/506 (51%)
Query: 78 RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
++ DA+ + PS+V N ++S K+ E+ L M G+ D ++Y+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
I I+ C + AL M + G EPD +T S L G+ +IS A ++ +++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
G PD T+T LI G E + L + M+ +G + +++ Y +++ +CK G ID A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
L LL +ME ++ D+V Y+ +I GLCK + A+ L+ EM +K I P+ F + +++
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
LC ++A +I +VV ++ +ID +VK G + EA +LY ++I++ I P
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
I T++SLI GFC + ++ +A+ + + + P+ VTY+T + +C+ ++ + L +
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
EM + + VTYT +I G + A + + M +GV P+ +TYN ++ CK
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
L KA + + +EP TYNI+I+G+C G +++ L +L +S +AY
Sbjct: 483 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYN 542
Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKG 583
T+I C +G +A + +M E G
Sbjct: 543 TMISGFCRKGSKEEADSLLKKMKEDG 568
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 129/483 (26%), Positives = 242/483 (50%), Gaps = 3/483 (0%)
Query: 6 YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
+ R + A+ V+AKM +L + I T +SLL H+ + D L D + +
Sbjct: 128 FCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 187
Query: 63 VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
+T + +I GL ++ +A+ + + + P +V+ +++ CK G ++A L
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLK 247
Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
M K + D YN +I GLC M++AL +M G+ PD TYS L
Sbjct: 248 KMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 307
Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
+ S A +++ ++ + +P++VT++ LI + + G + E KL + M+ + ++ YS
Sbjct: 308 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 367
Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
L++ C R+DEA + M + P++VTYS LI+G CK +V + ++L+ EM +
Sbjct: 368 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQR 427
Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
+ N+ + ++ G + A+M F ++ +++ YNI++DG K G + +A
Sbjct: 428 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 487
Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
+ ++ L + P I T+N +I G CK GKV D L + L G+ P+ + Y T ++
Sbjct: 488 MVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISG 547
Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
+C +G+ + +LL++M+ P TY +I+ + + + +L+++M G D
Sbjct: 548 FCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGD 607
Query: 483 QIT 485
T
Sbjct: 608 AST 610
Score = 217 bits (552), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 142/544 (26%), Positives = 245/544 (45%), Gaps = 50/544 (9%)
Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
+++A++ DM + P + ++ L +++ + +++ G D+ TY++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
I +C+ + L + M+ G++ +++ S LL+ C S RI +A+ L+ +M +G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
KPD T++ LI GL +K +A+ L ++M + P+ +G ++ GLC++ I A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
+ DVV+YN +IDG K ++ +A+ L+ ++ K I P + T++SLI
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
C G+ +DA RLL + + P+ VT++ ++A+ +EG + L EM ++I P
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
TY+ +I G C +L EA + E M P+ +TY+T+I+ FCK K + + +L +
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423
Query: 509 MWLHNL-----------------------------------EPTSATYNILIDGLCVNGD 533
M L P TYNIL+DGLC NG
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483
Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
L A + LQ + Y +I+ C G V FC + KG ++ Y
Sbjct: 484 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNT 543
Query: 594 --SFFCM-------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
S FC M +G P+ ++ A + GD + EL M G
Sbjct: 544 MISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCG 603
Query: 639 LLPD 642
D
Sbjct: 604 FAGD 607
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 3/169 (1%)
Query: 14 DAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVI 70
+A V +M + + +I TYN LL L + +++ ++ S ++YT +I+I
Sbjct: 451 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 510
Query: 71 DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
+G+C+ +++D + K P+V++ N ++S +C+ G E A L M + G
Sbjct: 511 EGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL 570
Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
P++ +YN LI G E + E +M G DA T ++ H
Sbjct: 571 PNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLH 619
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 55/140 (39%)
Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
K+ +AV L DM P + +N ++ + K L QM + TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
I I+ C L A +L + + V ++++ +C + A+ QMVE
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 583 GFEISIRDYTKSFFCMMLSN 602
G++ +T + L N
Sbjct: 183 GYKPDTFTFTTLIHGLFLHN 202
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 268 bits (684), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 161/536 (30%), Positives = 264/536 (49%), Gaps = 25/536 (4%)
Query: 66 NSIVIDGLCQQSRLQ---------DAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
+SI +C + RL+ DAI QE PS+V SR+ F+ +
Sbjct: 47 SSISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDF----SRF----FSAI 98
Query: 117 AKGL-------FCLMLKY-GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
A+ FC L+ G+ + ++ NI+I+ C A + + G EPD
Sbjct: 99 ARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDT 158
Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
T++ L KG L ++S A ++ +++ G PD+VTY ++ G C+ G+ L L
Sbjct: 159 TTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRK 218
Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
M + K +V YS ++ S+C+ G ID A+ L EME G+K +VTY+ L+RGLCK K
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
+ L +M S+ I PN +L ++ + EA + +I +++ YN
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338
Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
++DGY + EA + ++ + SP IVTF SLI G+C +V D ++ I G
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398
Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
L +AVTY+ + +C+ G I+ L QEM + + P +TY +++ GLC KL++A+
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458
Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
++ ED+ + + Y TII CK + A+ L + ++P TY ++I GL
Sbjct: 459 EIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 518
Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
C G L A+ LL ++E + Y T+I+AH +GD+ + +M GF
Sbjct: 519 CKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Score = 238 bits (607), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 139/534 (26%), Positives = 270/534 (50%), Gaps = 42/534 (7%)
Query: 8 RTGMVH----DAVFVIAKM---KELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
R+G+V DA+ + +M + L V + S + + +++ D ++++
Sbjct: 61 RSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIA 120
Query: 61 RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
N+YT +I+I+ C R CK FA G
Sbjct: 121 HNIYTLNIMINCFC--------------------------------RCCKTCFAYSVLGK 148
Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
++K G PD ++N LI GL + G + EA+ + M +G +PD +TY+ + G
Sbjct: 149 ---VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
S A +++K+ + D+ TY+ +I C+ G ++ + L + M ++G K +V+
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
Y+ L+ +CK+G+ ++ LL +M + + P+++T+++L+ K+ K+ +A +LY EM
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
++ ISPN + ++ G C + ++EA D ++ + C D+V + +I GY + +
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
+ ++++R + ++ + + VT++ L+ GFC++GK+ A L + HG+ P +TY +
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
+ C+ G +++ L + ++++ + V YT +I+G+CK K+++A L + GV
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505
Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
P+ +TY +I CK L +A LL +M P TYN LI +GDL
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 156/602 (25%), Positives = 267/602 (44%), Gaps = 62/602 (10%)
Query: 60 PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK- 118
P + T S+ D LC S + ++F S+ + N + G ++ K
Sbjct: 19 PHLLKTGSLRTDLLCTISSFF-------SSCERDFS-SISNGNVCFRERLRSGIVDIKKD 70
Query: 119 ---GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
LF M++ P ++ + L+F + +G+ + T +I+
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
F + A+ V+ K++ G +PD T+ LI G G V E + L + M+ G +
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
+V+ Y+ +++ +C+SG AL LL +ME +K D+ TYS +I LC+ + AI L
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
+ EM +K I + VV YN ++ G K
Sbjct: 251 FKEMETKGIKSS-----------------------------------VVTYNSLVRGLCK 275
Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
G + L + ++ + I P+++TFN L+ F K GK+ +A L + G+ P+ +T
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
Y T M+ YC + + +L M P VT+T +IKG C ++ + +++ ++
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
G+ + +TY+ +++ FC+ ++ A +L +M H + P TY IL+DGLC NG L+
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455
Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK-- 593
A + LQ+ + L V YTTII+ C G V A FC + KG + ++ YT
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
Query: 594 SFFC-------------MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
S C M +G P+ ++ A + GDL + +L M G
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575
Query: 641 PD 642
D
Sbjct: 576 AD 577
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 267 bits (683), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 158/516 (30%), Positives = 264/516 (51%), Gaps = 1/516 (0%)
Query: 68 IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
I+ +GL +L DAI PS+ N ++S K+ ++ L M +
Sbjct: 56 ILRNGL-HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114
Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
G+ + ++YNILI+ C + AL M + G EP +T S L G+ +IS A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
++ +++ G PD +T+T LI G E + L + M+ +G + N++ Y V+++
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
+CK G ID A LL +MEA ++ ++V YS +I LCK A+ L+ EM +K + PN
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 294
Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
+ +++ LC E ++A +I +VV +N +ID +VK G + EA +LY
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYD 354
Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
++I++ I P I T++SLI GFC + ++ +A+ + + + P+ VTY T +N +C+
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK 414
Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
I + L +EM + + VTYT +I G + A + + M GV P+ +TYN
Sbjct: 415 RIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYN 474
Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
T++ CK L KA + + +EPT TYNI+I+G+C G +++ L SL
Sbjct: 475 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 534
Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
+ + Y T+I C +G +A F +M E G
Sbjct: 535 GVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 258 bits (658), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/510 (28%), Positives = 275/510 (53%), Gaps = 3/510 (0%)
Query: 14 DAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNSIVI 70
DA+ + M + SI +N LL ++ D++ L + ++ N+YT +I+I
Sbjct: 68 DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILI 127
Query: 71 DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
+ C++S++ A+ L + + PS+V+L+++++ YC A L M++ G
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
PD ++ LIHGL + EA+ + M + G +P+ +TY ++ G I A+ +
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 247
Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
+ K+ + ++V Y+ +I C+ + ++ L L M ++G + NVI YS L+S +C
Sbjct: 248 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 307
Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
R +A LL +M + P++VT++ LI K+ K+ +A +LY+EM + I P+ F
Sbjct: 308 YERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 367
Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
+ +++ G C + + EA+ F+ +I +C +VV YN +I+G+ K I E V+L+R++
Sbjct: 368 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMS 427
Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
++ + + VT+ +LI+GF + +A+ + + G+ P+ +TY T ++ C+ G ++
Sbjct: 428 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 487
Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
+ + + + ++ + PT TY ++I+G+CK K+++ L + + GV PD I YNT+I
Sbjct: 488 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547
Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
FC+ +A L +M P S T
Sbjct: 548 SGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 145/573 (25%), Positives = 252/573 (43%), Gaps = 35/573 (6%)
Query: 86 LQETAGKEFGPSVVSLNAIMSRYCKLGFA-EVAKGLFCLMLKYGLHPDAFSYNILIHGLC 144
LQ PS + L + C G A G + +L+ GLH
Sbjct: 21 LQGKGNPRIAPSSIDLCGM----CYWGRAFSSGSGDYREILRNGLH-------------- 62
Query: 145 IAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
+ +++A+ M + P ++ L + + + +K+ G ++
Sbjct: 63 -SMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLY 121
Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
TY +LI +C+ + L L M+ G++ +++ S LL+ C RI +A+ L+ +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
+G +PD +T++ LI GL +K +A+ L + M + PN +G ++ GLC++ I
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
A + + + +VV+Y+ +ID K + +A+ L+ ++ K + P+++T++SL
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
I C + +DA RLL + + P+ VT+ ++A+ +EG + L EM ++I
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
P TY+ +I G C +L EA + E M P+ +TYNT+I FCK K + + +
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421
Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
L +M L + TY LI G D NA + + + + Y T++ C
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481
Query: 565 AEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQE 609
G + KAM F + E +I Y FC + G PD
Sbjct: 482 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 541
Query: 610 ICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
I M+ F + G L M + G LPD
Sbjct: 542 IYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 266 bits (681), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 154/491 (31%), Positives = 255/491 (51%), Gaps = 1/491 (0%)
Query: 102 NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR 161
N +++ + G + K ++ ML+ + P+ ++YN +++G C G++EEA ++ + +
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246
Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
G++PD TY+ L G+ + A+KV ++ +KG + V YT LI G C ++E
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDE 306
Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
+ L M V Y+VL+ S+C S R EAL L+ EME G+KP++ TY++LI
Sbjct: 307 AMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLID 366
Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
LC Q K KA +L +M K + PN + A++ G C++ MI +A + +
Sbjct: 367 SLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSP 426
Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
+ YN +I GY K N+ +A+ + +++E+++ P +VT+NSLI G C++G A RLL
Sbjct: 427 NTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
+ GL P TYT+ +++ C+ ++ L +E K + P V YT +I G CK
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545
Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
K+ EA +LE M P+ +T+N +I C L++A L +M L+PT +T
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD 605
Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
ILI L +GD +A + YTT I+ +C EG + A +M E
Sbjct: 606 TILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRE 665
Query: 582 KGFEISIRDYT 592
G + Y+
Sbjct: 666 NGVSPDLFTYS 676
Score = 248 bits (632), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 152/509 (29%), Positives = 251/509 (49%), Gaps = 21/509 (4%)
Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
YN L++ L G ++E + +M V P+ TY+ + G+ L + A + + K++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
G DPD TYT LI GYCQ +++ K+ M +G + N +AY+ L+ +C + RID
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
EA+ L +M+ P + TY++LI+ LC ++ +A+ L EM I PN + ++
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
LC + +AR ++ + +V+ YN +I+GY K G I +AV + + +++S
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
P+ T+N LI G+CK+ V A +L+ + + P VTY + ++ C GN L
Sbjct: 426 PNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
L M + + P TYT +I LCK +++EA L + + GV P+ + Y +I +CK
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
+ +A +L +M N P S T+N LI GLC +G LK A L + + + T
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVST 604
Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVML 615
T +I +GD D+ S F MLS+G PD +
Sbjct: 605 DTILIHRLLKDGDF--------------------DHAYSRFQQMLSSGTKPDAHTYTTFI 644
Query: 616 IAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
+ + G L ++ A M ++G+ PD F
Sbjct: 645 QTYCREGRLLDAEDMMAKMRENGVSPDLF 673
Score = 240 bits (612), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 182/692 (26%), Positives = 320/692 (46%), Gaps = 81/692 (11%)
Query: 12 VHDAVFVI---AKMK-----ELDLKVSIQTYNSLLYNLRH---TDIMWDLYDDIKVSETP 60
V DA++V+ KM EL K+ I YN+LL +L D M +Y ++ +
Sbjct: 156 VGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVC 215
Query: 61 RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
N+YT + +++G C+ +++A ++ + P + +++ YC+ + A +
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
F M G + +Y LIHGLC+A ++EA++ M P TY++L K
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335
Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
+ S A +++++ G P+I TYTVLI C E+ +L ML +G NVI
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
Y+ L++ CK G I++A+ ++ ME+ L P+ TY+ LI+G CK + VHKA+ + N+M
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKML 454
Query: 301 SKRISPNSFAHGAILLG-----------------------------------LCEKEMIT 325
+++ P+ + +++ G LC+ + +
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514
Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
EA FDSL +VV+Y +IDGY K G + EA + +++ K P+ +TFN+LI
Sbjct: 515 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
+G C +GK+ +A L + + GL+P+ T T ++ ++G+ + Q+M +
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK 634
Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
P TYT I+ C++ +L +A ++ M GV+PD TY+++I+ + AF +
Sbjct: 635 PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDV 694
Query: 506 LNQMWLHNLEPTSATYNILIDG---------------LCVNGDLKNADC---LLVSLQEH 547
L +M EP+ T+ LI LC ++ D LL + EH
Sbjct: 695 LKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEH 754
Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE-KGFEISIRDYTKSFFCM-------- 598
+++ +Y +I C G++ A F M +G S + C
Sbjct: 755 SVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNE 814
Query: 599 -------MLSNGFPPDQEICEVMLIAFHQGGD 623
M+ G P E C+V++ ++ G+
Sbjct: 815 AAKVVDDMICVGHLPQLESCKVLICGLYKKGE 846
Score = 216 bits (550), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 161/632 (25%), Positives = 285/632 (45%), Gaps = 65/632 (10%)
Query: 33 TYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
Y L++ L R D DL+ +K E V T +++I LC R +A+ ++E
Sbjct: 290 AYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM 349
Query: 90 AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
P++ + ++ C E A+ L ML+ GL P+ +YN LI+G C G +
Sbjct: 350 EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409
Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
E+A++ M + P+ TY+ L KG+ S + A V+ K+L + PD+VTY L
Sbjct: 410 EDAVDVVELMESRKLSPNTRTYNELIKGY-CKSNVHKAMGVLNKMLERKVLPDVVTYNSL 468
Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
I G C+ GN + +L +M +G + Y+ ++ S+CKS R++EA L +E G+
Sbjct: 469 IDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
P++V Y+ LI G CK KV +A + +M SK PNS A++ GLC + EA +
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL 588
Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
+ ++ V I+I +K G+ A ++Q++ P T+ + I +C
Sbjct: 589 LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648
Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY--------------------CEEGN- 428
+ G++ DA ++ ++ +G+ P TY++ + Y CE
Sbjct: 649 REGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQH 708
Query: 429 -----IQRLLA---------------------------LLQEMETKAIGPTHVTYTVVIK 456
I+ LL LL++M ++ P +Y +I
Sbjct: 709 TFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLIL 768
Query: 457 GLCKQWKLQEAVQLLEDMYVI-GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
G+C+ L+ A ++ + M G++P ++ +N ++ CK K +A ++++ M
Sbjct: 769 GICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHL 828
Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
P + +LI GL G+ + + +L + ++A+ II +G V
Sbjct: 829 PQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYEL 888
Query: 576 FCQMVEKGFEISIRDYTKSFFCMMLSNGFPPD 607
F M + G + S + Y+ +L G PPD
Sbjct: 889 FNVMEKNGCKFSSQTYS------LLIEG-PPD 913
Score = 183 bits (464), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 122/466 (26%), Positives = 230/466 (49%), Gaps = 25/466 (5%)
Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
I+ L+IK D V + + C+ N +E +L+ +KL + Y+ LL+S+ +
Sbjct: 145 IRLLMIKSCDS--VGDALYVLDLCRKMNKDERFELK-------YKLIIGCYNTLLNSLAR 195
Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
G +DE + EM + P++ TY+ ++ G CK V +A Q +++ + P+ F
Sbjct: 196 FGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFT 255
Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
+ ++++G C+++ + A F+ + + C ++ V Y +I G I EA+ L+ ++
Sbjct: 256 YTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMK 315
Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
+ P++ T+ LI C + + ++A L+ ++ G++P+ TYT +++ C + +
Sbjct: 316 DDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFE 375
Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
+ LL +M K + P +TY +I G CK+ +++AV ++E M ++P+ TYN +I
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI 435
Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
+ +CK ++ KA +LN+M + P TYN LIDG C +G+ +A LL + + +
Sbjct: 436 KGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC----------- 597
+ YT++I + C V +A F + +KG ++ YT +C
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 598 --MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
MLS P+ ++ G L L M+K GL P
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Score = 166 bits (419), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 126/544 (23%), Positives = 246/544 (45%), Gaps = 58/544 (10%)
Query: 6 YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
Y + GM+ DAV V+ M+ L + +TYN L
Sbjct: 403 YCKRGMIEDAVDVVELMESRKLSPNTRTYNEL---------------------------- 434
Query: 66 NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
I G C +S + A+ L + ++ P VV+ N+++ C+ G + A L LM
Sbjct: 435 ----IKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489
Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
GL PD ++Y +I LC + +EEA + + + + GV P+ + Y+ L G+ ++
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549
Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
A +++K+L K P+ +T+ LI G C G ++E L E M+ G + V ++L+
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609
Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
+ K G D A +M + G KPD TY+ I+ C++ ++ A + +M +S
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVS 669
Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIM---SNCIQDVVLYNIMIDGYVK------- 355
P+ F + +++ G + + + FD L + C + +I ++
Sbjct: 670 PDLFTYSSLIKGYGD---LGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQK 726
Query: 356 --------LGNIGE---AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
+ N+ E V+L +++E ++P+ ++ LI G C+ G + A ++ D +
Sbjct: 727 GSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHM 786
Query: 405 KLH-GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
+ + G+ PS + + ++ C+ ++ +M P + V+I GL K+ +
Sbjct: 787 QRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGE 846
Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
+ + +++ G D++ + II K + ++L N M + + +S TY++
Sbjct: 847 KERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSL 906
Query: 524 LIDG 527
LI+G
Sbjct: 907 LIEG 910
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 266 bits (680), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 158/526 (30%), Positives = 278/526 (52%), Gaps = 3/526 (0%)
Query: 62 NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG---PSVVSLNAIMSRYCKLGFAEVAK 118
NV++ +I++ GLC ++R Q+A+ L A G P VVS +++ + K G ++ A
Sbjct: 157 NVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAY 216
Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
+ ML G+ PD +YN +I LC A +M++A+E N M ++GV PD +TY+ + G+
Sbjct: 217 STYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 276
Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
Q A ++K+ G +PD+VTY++L+ C+ G E K+ + M +G K +
Sbjct: 277 CSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEI 336
Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
Y LL G + E GLL M G+ PD +SILI KQ KV +A+ ++++
Sbjct: 337 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSK 396
Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
M + ++PN+ +GA++ LC+ + +A +YF+ +I ++YN +I G
Sbjct: 397 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456
Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
A +L +++++ I + + FNS+I CK G+V ++ +L + + G++P+ +TY T
Sbjct: 457 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNT 516
Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
+N YC G + + LL M + + P VTY+ +I G CK ++++A+ L ++M G
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576
Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
V+PD ITYN I++ + + A +L ++ + +TYNI++ GLC N +A
Sbjct: 577 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 636
Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
+ +L ++ L + +I A G +A F G
Sbjct: 637 QMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGL 682
Score = 264 bits (675), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 172/627 (27%), Positives = 308/627 (49%), Gaps = 43/627 (6%)
Query: 18 VIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLY--DDIKVSETPRNVYTNSIVID 71
V+ +M EL ++ +YN LL L R + + L+ D + +P +V + + VI+
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 72 GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
G ++ A E + P VV+ N+I++ CK + A + M+K G+ P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264
Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
D +YN ++HG C +G +EA+ F M GVEPD +TYS+L + A K+
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324
Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
+ +G P+I TY L+ GY G + E L ++M+ G + +S+L+ + K
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQ 384
Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
G++D+A+ + +M GL P+ VTY +I LCK +V A+ + +M + +SP + +
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 444
Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
+++ GLC A ++ + + +N +ID + K G + E+ +L+ ++
Sbjct: 445 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVR 504
Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
+ P+++T+N+LI G+C GK+ +A +LL + GL+P+ VTY+T +N YC+ ++
Sbjct: 505 IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMED 564
Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
L L +EME+ + P +TY ++++GL + + A +L + G + TYN I+
Sbjct: 565 ALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILH 624
Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID---------------------GLCV 530
CK K A Q+ + L +L+ + T+NI+ID GL
Sbjct: 625 GLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVP 684
Query: 531 N--------------GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
N G L+ D L +S++++ ++ I++ G++ +A T+
Sbjct: 685 NYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYL 744
Query: 577 CQMVEKGFEISIRDYTKSFFCMMLSNG 603
+ EK F S+ T S F +LS G
Sbjct: 745 SMIDEKHF--SLEASTASLFIDLLSGG 769
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 145/581 (24%), Positives = 267/581 (45%), Gaps = 23/581 (3%)
Query: 80 QDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG---LHPDAFSY 136
+DA E + G S+ LN ++ + A A + M + G + PD +Y
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSPA-AAVSRYNRMARAGADEVTPDLCTY 90
Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
ILI C AG ++ ++ + G DAI ++ L KG + S A ++ + +
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 197 K-GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ---GFKLNVIAYSVLLSSMCKSG 252
+ G P++ +Y +L+ G C +E L+L +M G +V++Y+ +++ K G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210
Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
D+A +EM G+ PD+VTY+ +I LCK + KA+++ N M + P+ +
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270
Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
+IL G C EA + + DVV Y++++D K G EA +++ + ++
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330
Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
+ P I T+ +L+ G+ G + + LLD + +G+ P ++ + AY ++G + +
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA 390
Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
+ + +M + + P VTY VI LCK ++++A+ E M G++P I YN++I
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450
Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
C C +A +L+ +M + + +N +ID C G + ++ L + +
Sbjct: 451 LCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPN 510
Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFC 597
+ Y T+I +C G + +AM MV G + + Y+ F
Sbjct: 511 VITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFK 570
Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
M S+G PD ++L Q + EL + +SG
Sbjct: 571 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 124/496 (25%), Positives = 233/496 (46%), Gaps = 54/496 (10%)
Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
PD+ TY +LI C+ G ++ G ++ +GF+++ IA++ LL +C R +A+ +
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144
Query: 261 -LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL------------------------ 295
L M +G P++ +Y+IL++GLC +++ +A++L
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 296 --------------YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
Y+EM + I P+ + +I+ LC+ + + +A ++++ + +
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264
Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
D + YN ++ GY G EA+ +++ + P +VT++ L+ CKNG+ +AR++
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324
Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
D++ GL+P TY T + Y +G + + LL M I P H ++++I KQ
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQ 384
Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
K+ +A+ + M G+ P+ +TY +I CK + A QM L P + Y
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 444
Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
N LI GLC + A+ L++ + + I L + + +II +HC EG V ++ F MV
Sbjct: 445 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVR 504
Query: 582 KGFEISIRDYTK--SFFCM-------------MLSNGFPPDQEICEVMLIAFHQGGDLGS 626
G + ++ Y + +C+ M+S G P+ ++ + + +
Sbjct: 505 IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMED 564
Query: 627 VFELAAVMIKSGLLPD 642
L M SG+ PD
Sbjct: 565 ALVLFKEMESSGVSPD 580
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 197/405 (48%), Gaps = 6/405 (1%)
Query: 1 MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKV 56
+L Y++ G V A+ V +KM++ L + TY +++ L R D M I
Sbjct: 376 ILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 435
Query: 57 SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
+P N+ NS+ I GLC ++ + A + E + + + N+I+ +CK G
Sbjct: 436 GLSPGNIVYNSL-IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 494
Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
++ LF LM++ G+ P+ +YN LI+G C+AG M+EA++ + M G++P+ +TYS L
Sbjct: 495 SEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLIN 554
Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
G+ +S++ A + +++ G PDI+TY +++ G Q +L + G ++
Sbjct: 555 GYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQI 614
Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
+ Y+++L +CK+ D+AL + + + LK + T++I+I L K + +A L+
Sbjct: 615 ELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 674
Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
S + PN + + + + + ++ E F S+ + C D + N ++ ++
Sbjct: 675 VAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQR 734
Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
G I A + EK S T SL GK + R L
Sbjct: 735 GEITRAGTYLSMIDEKHFSLEAST-ASLFIDLLSGGKYQEYYRFL 778
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 266 bits (680), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 157/569 (27%), Positives = 282/569 (49%), Gaps = 42/569 (7%)
Query: 7 SRTGMVH----DAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSET 59
SR ++H +AV + +M + SI ++ LL ++ D++ + +++
Sbjct: 37 SRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGV 96
Query: 60 PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
N+YT +I+I+ LC++S+L A+ AI+ + KLG+
Sbjct: 97 SHNLYTYNIMINCLCRRSQLSFAL-------------------AILGKMMKLGYG----- 132
Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
P + N L++G C + EA+ + M G +PD +T++ L G
Sbjct: 133 -----------PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 181
Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
++ S A +++++++KG PD+VTY +I G C+ G + L L M + +V+
Sbjct: 182 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 241
Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
YS ++ S+CK +D+AL L EM+ G++PD+ TYS LI LC + A +L ++M
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
++I+PN +++ ++ + EA FD +I + ++V YN +I+G+ +
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
EA Q++ ++ K P +VT+N+LI GFCK KV D L + GL + VTYTT
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
++ + + + + ++M + + P +TY ++ GLCK KL++A+ + E + +
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
PD TYN + CK + + L + L ++P YN +I G C G + A
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYT 541
Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
L + ++E Y T+I+AH +GD
Sbjct: 542 LFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570
Score = 259 bits (661), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 156/531 (29%), Positives = 270/531 (50%), Gaps = 8/531 (1%)
Query: 61 RNVYTNSIVIDGLCQQ-SR-------LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG 112
R +Y + + DG ++ SR L +A+ E PS+V + ++S K+
Sbjct: 20 RGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMK 79
Query: 113 FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
++ M G+ + ++YNI+I+ LC + AL M + G P +T +
Sbjct: 80 KFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLN 139
Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
L GF ++IS A ++ +++ G PD VT+T L+ G Q E + L E M+ +
Sbjct: 140 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 199
Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
G + +++ Y +++ +CK G D AL LL +ME ++ D+V YS +I LCK V A
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
+ L+ EM +K I P+ F + +++ LC ++A ++ +VV +N +ID
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319
Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
+ K G + EA +L+ ++I++ I P+IVT+NSLI GFC + ++ +A+++ + P
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379
Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
VTY T +N +C+ + + L ++M + + VTYT +I G + A + +
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFK 439
Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
M GV P+ +TYNT++ CK L KA + + +EP TYNI+ +G+C G
Sbjct: 440 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAG 499
Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
+++ L SL + +AY T+I C +G +A T F +M E G
Sbjct: 500 KVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 170/368 (46%), Gaps = 15/368 (4%)
Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
K+ +A+ L+ EM R P+ +L + + + + + + + ++ YN
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
IMI+ + + A+ + ++++ PSIVT NSL+ GFC ++++A L+D +
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
G +P VT+TT ++ + +AL++ M K P VTY VI GLCK+ + A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
+ LL M + D + Y+T+I S CK + + A L +M + P TY+ LI
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
LC G +A LL + E I+ V + ++I A EG + +A F +M+++ + +
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 588 IRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
I Y + F +M+S PD ++ F + + EL
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 633 VMIKSGLL 640
M + GL+
Sbjct: 405 DMSRRGLV 412
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 3/169 (1%)
Query: 14 DAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVI 70
+A V +M + +I TYN+LL L + +++ ++ S+ ++YT +I+
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMS 492
Query: 71 DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
+G+C+ +++D + K P V++ N ++S +CK G E A LF M + G
Sbjct: 493 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPL 552
Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
PD+ +YN LI G + E +M DA TY ++ H
Sbjct: 553 PDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLH 601
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 266 bits (679), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 153/500 (30%), Positives = 261/500 (52%), Gaps = 2/500 (0%)
Query: 87 QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
QE + G +V +LN +++ CK G E + + G++PD +YN LI
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
G MEEA E N M G P TY+ + G + A +V ++L G PD TY
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
L+ C+ G+V E K+ M S+ +++ +S ++S +SG +D+AL ++
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
GL PD V Y+ILI+G C++ + A+ L NEM + + + + IL GLC+++M+ E
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 463
Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
A F+ + D I+IDG+ KLGN+ A++L++++ EKRI +VT+N+L+
Sbjct: 464 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLD 523
Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
GF K G + A+ + + + P+ ++Y+ +NA C +G++ + EM +K I P
Sbjct: 524 GFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583
Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
T + +IKG C+ + LE M G PD I+YNT+I F + +++ KAF L+
Sbjct: 584 TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLV 643
Query: 507 NQMWLHN--LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
+M L P TYN ++ G C +K A+ +L + E ++ + YT +I
Sbjct: 644 KKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFV 703
Query: 565 AEGDVHKAMTFFCQMVEKGF 584
++ ++ +A +M+++GF
Sbjct: 704 SQDNLTEAFRIHDEMLQRGF 723
Score = 252 bits (643), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 155/556 (27%), Positives = 263/556 (47%), Gaps = 40/556 (7%)
Query: 1 MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRH---TDIMWDLYDDIKVS 57
+L Y + + +A ++ VSI N+L+ +L ++ W +Y +I S
Sbjct: 170 LLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRS 229
Query: 58 ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
NVYT +I+++ LC+ +++ FL + K P +V+ N ++S Y G E A
Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEA 289
Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL--- 174
L M G P ++YN +I+GLC G E A E +M R G+ PD+ TY L
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 175 --AKG------------------------------FHLLSQISGAWKVIQKLLIKGSDPD 202
KG F + A + G PD
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 409
Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
V YT+LI GYC+ G + + LR ML QG ++V+ Y+ +L +CK + EA L
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN 469
Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
EM L PD T +ILI G CK + A++L+ +M KRI + + +L G +
Sbjct: 470 EMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVG 529
Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
I A+ + ++ + + Y+I+++ G++ EA +++ ++I K I P+++ N
Sbjct: 530 DIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICN 589
Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
S+I G+C++G +D L+ + G P ++Y T + + E N+ + L+++ME +
Sbjct: 590 SMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEE 649
Query: 443 AIG--PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
G P TY ++ G C+Q +++EA +L M GV PD+ TY +I F +L
Sbjct: 650 QGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLT 709
Query: 501 KAFQLLNQMWLHNLEP 516
+AF++ ++M P
Sbjct: 710 EAFRIHDEMLQRGFSP 725
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 151/592 (25%), Positives = 276/592 (46%), Gaps = 52/592 (8%)
Query: 68 IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
++I Q +L++A K F S+ + NA++ ++G+ E+A G++ + +
Sbjct: 170 LLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRS 229
Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
G+ + ++ NI+++ LC G ME+ F LSQ+
Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEKVGTF-------------------------LSQVQE- 263
Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
KG PDIVTY LI Y G +EE +L M +GF V Y+ +++
Sbjct: 264 ---------KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVING 314
Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
+CK G+ + A + EM GL PD TY L+ CK+ V + +++++M S+ + P+
Sbjct: 315 LCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPD 374
Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
+++ + +A MYF+S+ + I D V+Y I+I GY + G I A+ L
Sbjct: 375 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRN 434
Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
+++++ + +VT+N++++G CK + +A +L + + L P + T T ++ +C+ G
Sbjct: 435 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLG 494
Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
N+Q + L Q+M+ K I VTY ++ G K + A ++ DM + P I+Y+
Sbjct: 495 NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYS 554
Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
++ + C L +AF++ ++M N++PT N +I G C +G+ + + L +
Sbjct: 555 ILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE 614
Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK--GFEISIRDYTKSF--FCM----- 598
++Y T+I E ++ KA +M E+ G + Y FC
Sbjct: 615 GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674
Query: 599 --------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
M+ G PD+ M+ F +L F + M++ G PD
Sbjct: 675 EAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 219/460 (47%), Gaps = 17/460 (3%)
Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
GS+ + + +LI Y Q + E + ++ S+GF +++ A + L+ S+ + G ++ A
Sbjct: 162 GSNDSV--FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELA 219
Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
G+ E+ G+ ++ T +I++ LCK K+ K +++ K + P+ + ++
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 279
Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
K ++ EA +++ V YN +I+G K G A +++ +++ +SP
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
T+ SL+ CK G V + ++ ++ + P V +++ M+ + GN+ + L
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
++ + P +V YT++I+G C++ + A+ L +M G D +TYNTI+ CK K
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459
Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
L +A +L N+M L P S T ILIDG C G+L+NA L ++E I L V Y
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519
Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-------------KSF--FCMMLSN 602
T++ GD+ A + MV K + Y+ ++F + M+S
Sbjct: 520 TLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK 579
Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
P IC M+ + + G+ MI G +PD
Sbjct: 580 NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPD 619
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 20/265 (7%)
Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
F+ LI + + K+ +A ++ G S + + G ++ + QE+
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
+G T +++ LCK K+++ L + GV PD +TYNT+I ++ +
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
+AF+L+N M P TYN +I+GLC +G + A + + +S Y +++
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQ 620
C +GDV VE T+ F M S PD M+ F +
Sbjct: 348 MEACKKGDV----------VE----------TEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 621 GGDLGSVFELAAVMIKSGLLPDKFL 645
G+L + ++GL+PD +
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNVI 412
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 103/237 (43%), Gaps = 40/237 (16%)
Query: 6 YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRN 62
+ + G + +A+ + KMKE +++ + TYN+LL D +++ D+ E
Sbjct: 490 HCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPT 549
Query: 63 VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAE------- 115
+ SI+++ LC + L +A E K P+V+ N+++ YC+ G A
Sbjct: 550 PISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLE 609
Query: 116 --VAKGLFCLMLKY----------------------------GLHPDAFSYNILIHGLCI 145
+++G + Y GL PD F+YN ++HG C
Sbjct: 610 KMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCR 669
Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
M+EA M GV PD TY+ + GF ++ A+++ ++L +G PD
Sbjct: 670 QNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 265 bits (678), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 150/525 (28%), Positives = 276/525 (52%), Gaps = 3/525 (0%)
Query: 12 VHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
+ DAV + M + SI ++ LL + D++ L + ++ N+YT SI
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 69 VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
+I+ C++S+L A+ L + + P +V+LN++++ +C A L M++ G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
PD+F++N LIHGL EA+ + M G +PD +TY I+ G I A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
+++K+ +P +V Y +I C NV + L L M ++G + NV+ Y+ L+ +
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
C GR +A LL +M + P++VT+S LI K+ K+ +A +LY+EM + I P+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
F + +++ G C + + EA+ F+ +I +C +VV YN +I G+ K + E ++L+R+
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
+ ++ + + VT+ +LI+GF + + +A+ + + G+ P +TY+ ++ C G
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
++ L + + ++ + P TY ++I+G+CK K+++ L + + GV P+ +TY T
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
++ FC+ +A L +M P S TYN LI +GD
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGD 586
Score = 255 bits (651), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 138/541 (25%), Positives = 273/541 (50%), Gaps = 5/541 (0%)
Query: 28 KVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQ 87
K+SI N L D +L+ D+ S ++ S ++ + + ++ I +
Sbjct: 51 KISINRLNDL-----KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGE 105
Query: 88 ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
+ ++ + + +++ +C+ +A + M+K G PD + N L++G C
Sbjct: 106 QMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGN 165
Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
+ +A+ M G +PD+ T++ L G ++ S A ++ ++++KG PD+VTY
Sbjct: 166 RISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYG 225
Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
+++ G C+ G+++ L L + M + V+ Y+ ++ ++C +++AL L EM+
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
G++P++VTY+ LIR LC + A +L ++M ++I+PN A++ ++ + EA
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 345
Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
+D +I + D+ Y+ +I+G+ + EA ++ +I K P++VT+N+LI G
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 405
Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
FCK +V + L + GL + VTYTT ++ + + + ++M + + P
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPD 465
Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
+TY++++ GLC K++ A+ + E + + PD TYN +I CK + + L
Sbjct: 466 IMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
+ L ++P TY ++ G C G + AD L ++E Y T+I+AH +G
Sbjct: 526 SLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDG 585
Query: 568 D 568
D
Sbjct: 586 D 586
Score = 251 bits (640), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/506 (28%), Positives = 259/506 (51%)
Query: 78 RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
+L DA+ + PS+V + ++S K+ ++ L M G+ + ++Y+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
ILI+ C + AL M + G EPD +T + L GF ++IS A ++ +++
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
G PD T+ LI G + E + L + M+ +G + +++ Y ++++ +CK G ID A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
L LL +ME ++P +V Y+ +I LC V+ A+ L+ EM +K I PN + +++
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
LC ++A +I +VV ++ +ID +VK G + EA +LY ++I++ I P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
I T++SLI GFC + ++ +A+ + + + P+ VTY T + +C+ + + L +
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
EM + + VTYT +I G + + A + + M GV PD +TY+ ++ C
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
+ A + + +EP TYNI+I+G+C G +++ L SL + V YT
Sbjct: 481 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 540
Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKG 583
T++ C +G +A F +M E+G
Sbjct: 541 TMMSGFCRKGLKEEADALFREMKEEG 566
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 151/533 (28%), Positives = 252/533 (47%), Gaps = 15/533 (2%)
Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
A LF M+K P ++ L+ + + + M G+ + TYSIL
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
F SQ+S A V+ K++ G +PDIVT L+ G+C + + + L M+ G++
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
+ ++ L+ + + R EA+ L+ M G +PDLVTY I++ GLCK+ + A+ L
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
+M +I P + I+ LC + + +A F + +VV YN +I
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
G +A +L +IE++I+P++VTF++LI F K GK+ +A +L D + ++P TY
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 364
Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
++ +N +C + + + M +K P VTY +IKG CK ++ E ++L +M
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ 424
Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
G+ + +TY T+I F + ++ A + QM + P TY+IL+DGLC NG ++
Sbjct: 425 RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVET 484
Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--S 594
A + LQ + Y +I+ C G V FC + KG + ++ YT S
Sbjct: 485 ALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 544
Query: 595 FFCM-------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVM 634
FC M G PD ++ A + GD + EL M
Sbjct: 545 GFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 216 bits (550), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 243/473 (51%), Gaps = 5/473 (1%)
Query: 6 YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPR 61
+ R + A+ V+AKM +L + I T NSLL H + + D + +++ P
Sbjct: 126 FCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP- 184
Query: 62 NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
+ +T + +I GL + +R +A+ + K P +V+ +++ CK G ++A L
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
M + + P YN +I LC ++ +AL +M G+ P+ +TY+ L +
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
+ S A +++ ++ + +P++VT++ LI + + G + E KL + M+ + ++ Y
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 364
Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
S L++ C R+DEA + M + P++VTY+ LI+G CK +V + ++L+ EM
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ 424
Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
+ + N+ + ++ G + A++ F ++ + D++ Y+I++DG G +
Sbjct: 425 RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVET 484
Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
A+ ++ L ++ P I T+N +I G CK GKV D L ++ L G++P+ VTYTT M+
Sbjct: 485 ALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 544
Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
+C +G + AL +EM+ + P TY +I+ + + +L+ +M
Sbjct: 545 GFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/433 (29%), Positives = 219/433 (50%), Gaps = 3/433 (0%)
Query: 12 VHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSETPRNVYTNSI 68
+ DAV ++ +M E+ + T+N+L++ L RH L D + V ++ T I
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226
Query: 69 VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
V++GLC++ + A+ L++ + P VV N I+ C A LF M G
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
+ P+ +YN LI LC G +A +DM + P+ +T+S L F ++ A
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346
Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
K+ +++ + DPDI TY+ LI G+C ++E + E+M+S+ NV+ Y+ L+
Sbjct: 347 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 406
Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
CK+ R+DE + L EM GL + VTY+ LI G + + A ++ +M S + P+
Sbjct: 407 CKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDI 466
Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
+ +L GLC + A + F+ L S D+ YNIMI+G K G + + L+
Sbjct: 467 MTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 526
Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
L K + P++VT+ +++ GFC+ G +A L +K G P + TY T + A+ +G+
Sbjct: 527 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGD 586
Query: 429 IQRLLALLQEMET 441
L++EM +
Sbjct: 587 KAASAELIREMRS 599
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 157/324 (48%), Gaps = 11/324 (3%)
Query: 10 GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDD-IKVSETPRNVYT 65
G DA +++ M E + ++ T+++L+ + + LYD+ IK S P +++T
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP-DIFT 363
Query: 66 NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
S +I+G C RL +A + K+ P+VV+ N ++ +CK + LF M
Sbjct: 364 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMS 423
Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
+ GL + +Y LIHG A + A M GV PD +TYSIL G ++
Sbjct: 424 QRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVE 483
Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
A V + L +PDI TY ++I G C+ G VE+G L + +G K NV+ Y+ ++
Sbjct: 484 TALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 543
Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
S C+ G +EA L EM+ G PD TY+ LIR + + +L EM S R
Sbjct: 544 SGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR-- 601
Query: 306 PNSFAHGAILLGLCEKEMITEARM 329
F A +GL M+ + R+
Sbjct: 602 ---FVGDASTIGLV-TNMLHDGRL 621
Score = 40.8 bits (94), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 50/123 (40%)
Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
KL +AV L DM P + ++ ++ + K L QM + TY+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
ILI+ C L A +L + + V +++ C + A++ QMVE
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 583 GFE 585
G++
Sbjct: 181 GYQ 183
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 264 bits (674), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 159/577 (27%), Positives = 283/577 (49%), Gaps = 13/577 (2%)
Query: 32 QTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAG 91
+ S L +++ D + DL+ D+ S V S + + + + + ++
Sbjct: 58 ERLRSGLVDIKADDAI-DLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMEL 116
Query: 92 KEFGPSVVSLNAIMSRYCK-----LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
K ++ +L+ +++ +C+ L F+ + K ++K G P+ +++ LI+GLC+
Sbjct: 117 KGIAHNLYTLSIMINCFCRCRKLCLAFSAMGK-----IIKLGYEPNTITFSTLINGLCLE 171
Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
G + EALE + M G +PD IT + L G L + + A +I K++ G P+ VTY
Sbjct: 172 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTY 231
Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
++ C+ G ++L M + KL+ + YS+++ +CK G +D A L EME
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM 291
Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
G+ +++TY+ILI G C + +L +M ++I+PN ++ ++ + E
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351
Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
A +I D + Y +IDG+ K ++ +A Q+ ++ K P+I TFN LI
Sbjct: 352 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
G+CK ++ D L + L G+ VTY T + +CE G + L QEM ++ + P
Sbjct: 412 GYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP 471
Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
VTY +++ GLC + ++A+++ E + + D YN II C + A+ L
Sbjct: 472 NIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 531
Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
+ L ++P TYNI+I GLC G L A+ L ++E + Y +I+AH +
Sbjct: 532 CSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGD 591
Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
GD K++ ++ GF S+ T MLS+G
Sbjct: 592 GDATKSVKLIEELKRCGF--SVDASTIKMVIDMLSDG 626
Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 147/560 (26%), Positives = 282/560 (50%), Gaps = 7/560 (1%)
Query: 8 RTGMVH----DAVFVIAKM---KELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
R+G+V DA+ + M + L + S + + D++ L +++
Sbjct: 61 RSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIA 120
Query: 61 RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
N+YT SI+I+ C+ +L A + + + P+ ++ + +++ C G A L
Sbjct: 121 HNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALEL 180
Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
M++ G PD + N L++GLC++G EA+ + M +G +P+A+TY +
Sbjct: 181 VDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCK 240
Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
Q + A ++++K+ + D V Y+++I G C+ G+++ L M +G N+I
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIIT 300
Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
Y++L+ C +GR D+ LL +M + P++VT+S+LI K+ K+ +A +L+ EM
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI 360
Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
+ I+P++ + +++ G C++ + +A D ++ C ++ +NI+I+GY K I
Sbjct: 361 HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRID 420
Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
+ ++L+R++ + + VT+N+LI GFC+ GK+ A+ L + + P+ VTY +
Sbjct: 421 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILL 480
Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
+ C+ G ++ L + +++E + Y ++I G+C K+ +A L + + GV
Sbjct: 481 DGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
P TYN +I CK L +A L +M P TYNILI +GD + L
Sbjct: 541 PGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKL 600
Query: 541 LVSLQEHNISLTKVAYTTII 560
+ L+ S+ +I
Sbjct: 601 IEELKRCGFSVDASTIKMVI 620
Score = 242 bits (617), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 146/544 (26%), Positives = 264/544 (48%), Gaps = 15/544 (2%)
Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
A+ A LF M+ P ++ L + + L M G+ + T SI
Sbjct: 69 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
+ F ++ A+ + K++ G +P+ +T++ LI G C G V E L+L + M+ G
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
K ++I + L++ +C SG+ EA+ L+ +M G +P+ VTY ++ +CK + A+
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
+L +M + I ++ + I+ GLC+ + A F+ + M +++ YNI+I G+
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
G + +L R +I+++I+P++VTF+ LI F K GK+ +A L + G+ P
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
+TYT+ ++ +C+E ++ + ++ M +K P T+ ++I G CK ++ + ++L
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
M + GV D +TYNT+I+ FC+ L A +L +M + P TY IL+DGLC NG+
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT- 592
+ A + +++ + L Y II C V A FC + KG + ++ Y
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 548
Query: 593 --------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
+ F M +G PD +++ A GD +L + + G
Sbjct: 549 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 608
Query: 639 LLPD 642
D
Sbjct: 609 FSVD 612
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 261 bits (668), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 145/525 (27%), Positives = 275/525 (52%), Gaps = 3/525 (0%)
Query: 12 VHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
+ DA+ + M + SI +N LL ++ D++ L + ++ E +YT +I
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 69 VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
+I+ C++S++ A+ L + + PS+V+L+++++ YC A L M++ G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
PD ++ LIHGL + EA+ + M + G +P+ +TY ++ G A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
++ K+ + D+V + +I C+ +V++ L L + M ++G + NV+ YS L+S +
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
C GR +A LL +M + P+LVT++ LI K+ K +A +LY++M + I P+
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
F + +++ G C + + +A+ F+ ++ +C DVV YN +I G+ K + + +L+R+
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425
Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
+ + + VT+ +LI G +G +A+++ + G+ P +TY+ ++ C G
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485
Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
+++ L + M+ I YT +I+G+CK K+ + L + + GV P+ +TYNT
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545
Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
+I C + L++A+ LL +M P S TYN LI +GD
Sbjct: 546 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 590
Score = 259 bits (662), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 140/489 (28%), Positives = 254/489 (51%), Gaps = 1/489 (0%)
Query: 81 DAILFLQETAGK-EFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNIL 139
D ++ L E + E + + N +++ +C+ +A L M+K G P + + L
Sbjct: 102 DVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSL 161
Query: 140 IHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
++G C + +A+ + M G PD IT++ L G L ++ S A ++ +++ +G
Sbjct: 162 LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC 221
Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
P++VTY V++ G C+ G+ + L L M + + +V+ ++ ++ S+CK +D+AL
Sbjct: 222 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 281
Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
L EME G++P++VTYS LI LC + A QL ++M K+I+PN A++
Sbjct: 282 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 341
Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
++ EA +D +I + D+ YN +++G+ + +A Q++ ++ K P +V
Sbjct: 342 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 401
Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
T+N+LI GFCK+ +V D L + GL VTYTT + +G+ + ++M
Sbjct: 402 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 461
Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
+ + P +TY++++ GLC KL++A+++ + M + D Y T+I CK +
Sbjct: 462 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 521
Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
+ L + L ++P TYN +I GLC L+ A LL ++E Y T+
Sbjct: 522 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTL 581
Query: 560 IKAHCAEGD 568
I+AH +GD
Sbjct: 582 IRAHLRDGD 590
Score = 248 bits (634), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 155/515 (30%), Positives = 247/515 (47%), Gaps = 35/515 (6%)
Query: 78 RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
+L DAI PS+V N ++S K+ +V L M + + ++YN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
ILI+ C + AL M + G EP +T S L G+ +IS A ++ +++
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
G PD +T+T LI G E + L + M+ +G + N++ Y V+++ +CK G D A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
L LL +MEA ++ D+V ++ +I LCK V A+ L+ EM +K I PN
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN---------- 294
Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
VV Y+ +I G +A QL +IEK+I+P+
Sbjct: 295 -------------------------VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 329
Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
+VTFN+LI F K GK +A +L D + ++P TY + +N +C + + + +
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 389
Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
M +K P VTY +IKG CK ++++ +L +M G+ D +TY T+I+
Sbjct: 390 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 449
Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
D A ++ QM + P TY+IL+DGLC NG L+ A + +Q+ I L YT
Sbjct: 450 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 509
Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
T+I+ C G V FC + KG + ++ Y
Sbjct: 510 TMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 544
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 213/439 (48%), Gaps = 3/439 (0%)
Query: 6 YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
Y + DAV ++ +M E+ + T+ +L++ L L D + N
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224
Query: 63 VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
+ T +V++GLC++ A+ L + + VV N I+ CK + A LF
Sbjct: 225 LVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 284
Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
M G+ P+ +Y+ LI LC G +A + +DM + P+ +T++ L F
Sbjct: 285 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 344
Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
+ A K+ ++ + DPDI TY L+ G+C +++ ++ E M+S+ +V+ Y+
Sbjct: 345 KFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYN 404
Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
L+ CKS R+++ L EM GL D VTY+ LI+GL A +++ +M S
Sbjct: 405 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 464
Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
+ P+ + +L GLC + +A FD + S D+ +Y MI+G K G + +
Sbjct: 465 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 524
Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
L+ L K + P++VT+N++I G C + +A LL +K G P++ TY T + A
Sbjct: 525 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Query: 423 YCEEGNIQRLLALLQEMET 441
+ +G+ L++EM +
Sbjct: 585 HLRDGDKAASAELIREMRS 603
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/468 (23%), Positives = 194/468 (41%), Gaps = 29/468 (6%)
Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
++ + L +P I ++ +CG C G + F Y +L +
Sbjct: 16 IVHRNLQGKGNPRIAPSSIDLCGMCYWG--------------RAFSSGSGDYREILRNGL 61
Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
++D+A+GL M P +V ++ L+ + K K I L +M I +
Sbjct: 62 HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLY 121
Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
+ ++ C + I+ A ++ +V + +++GY I +AV L Q+
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
+E P +TF +LI+G + K ++A L+D + G +P+ VTY +N C+ G+
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
L LL +ME I V + +I LCK + +A+ L ++M G+ P+ +TY+++
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
I C A QLL+ M + P T+N LID G A+ L + + +I
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIRDYTKS-------- 594
Y +++ C + KA F MV K + I+ + KS
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 595 FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
F M G D ++ GD + ++ M+ G+ PD
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 148/323 (45%), Gaps = 9/323 (2%)
Query: 10 GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTN 66
G DA +++ M E + ++ T+N+L+ + LYDD+ +++T
Sbjct: 309 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTY 368
Query: 67 SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
+ +++G C RL A + K+ P VV+ N ++ +CK E LF M
Sbjct: 369 NSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSH 428
Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
GL D +Y LI GL G + A + M GV PD +TYSIL G ++
Sbjct: 429 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 488
Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
A +V + DI YT +I G C+ G V++G L + +G K NV+ Y+ ++S
Sbjct: 489 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 548
Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
+C + EA LL +M+ G P+ TY+ LIR + + +L EM S R
Sbjct: 549 GLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCR--- 605
Query: 307 NSFAHGAILLGLCEKEMITEARM 329
F A +GL M+ + R+
Sbjct: 606 --FVGDASTIGLVA-NMLHDGRL 625
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 261 bits (666), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/457 (30%), Positives = 243/457 (53%), Gaps = 3/457 (0%)
Query: 67 SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
+ +I G C+ + + A L+ G P V++ N ++S YCK G E+ L ++ +
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAG--EINNAL-SVLDR 197
Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
+ PD +YN ++ LC +G +++A+E + M + PD ITY+IL + S +
Sbjct: 198 MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257
Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
A K++ ++ +G PD+VTY VL+ G C+ G ++E +K M S G + NVI ++++L
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
SMC +GR +A LL +M G P +VT++ILI LC++ + +AI + +M P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
NS ++ +L G C+++ + A Y + ++ C D+V YN M+ K G + +AV++
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
QL K SP ++T+N++I G K GK A +LLD ++ L+P +TY++ + E
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
G + + E E I P VT+ ++ GLCK + A+ L M G P++ +Y
Sbjct: 498 GKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSY 557
Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
+I ++A +LLN++ L S+ +
Sbjct: 558 TILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQV 594
Score = 256 bits (655), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 132/472 (27%), Positives = 247/472 (52%), Gaps = 3/472 (0%)
Query: 73 LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
+ + L++ FL+ P ++ ++ +C+LG A + ++ G PD
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
+YN++I G C AG + AL + R V PD +TY+ + + ++ A +V+
Sbjct: 172 VITYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
++L + PD++TYT+LI C+ V +KL + M +G +V+ Y+VL++ +CK G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
R+DEA+ L +M + G +P+++T++I++R +C + A +L +M K SP+
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
++ LC K ++ A + + C + + YN ++ G+ K + A++ +++ +
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
P IVT+N+++ CK+GKV DA +L+ + G P +TY T ++ + G +
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468
Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
+ LL EM K + P +TY+ ++ GL ++ K+ EA++ + +G+ P+ +T+N+I+
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLG 528
Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
CK + +A L M +P +Y ILI+GL G K A LL L
Sbjct: 529 LCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 253 bits (645), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 133/447 (29%), Positives = 238/447 (53%), Gaps = 3/447 (0%)
Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
G +EE +F +M HG PD I + L +GF L + A K+++ L G+ PD++T
Sbjct: 115 TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVIT 174
Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
Y V+I GYC+ G + L + + M +V+ Y+ +L S+C SG++ +A+ +L M
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
PD++TY+ILI C+ V A++L +EM + +P+ + ++ G+C++ +
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
EA + + + S C +V+ +NI++ G +A +L ++ K SPS+VTFN LI
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
C+ G + A +L+ + HG +P++++Y ++ +C+E + R + L+ M ++
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
P VTY ++ LCK K+++AV++L + G +P ITYNT+I K KA +L
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
L++M +L+P + TY+ L+ GL G + A + I V + +I+ C
Sbjct: 472 LDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK 531
Query: 566 EGDVHKAMTFFCQMVEKGFEISIRDYT 592
+A+ F M+ +G + + YT
Sbjct: 532 SRQTDRAIDFLVFMINRGCKPNETSYT 558
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 236/461 (51%), Gaps = 3/461 (0%)
Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
M+ +G PD LI G C G +A + + G PD ITY+++ G+ +
Sbjct: 128 MVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGE 187
Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
I+ A V+ ++ + PD+VTY ++ C G +++ +++ + ML + +VI Y++
Sbjct: 188 INNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTI 244
Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
L+ + C+ + A+ LL EM G PD+VTY++L+ G+CK+ ++ +AI+ N+M S
Sbjct: 245 LIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304
Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
PN H IL +C +A ++ VV +NI+I+ + G +G A+
Sbjct: 305 CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAI 364
Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
+ ++ + P+ +++N L++GFCK K+ A L+ + G P VTY T + A
Sbjct: 365 DILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL 424
Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
C++G ++ + +L ++ +K P +TY VI GL K K +A++LL++M + PD
Sbjct: 425 CKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDT 484
Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
ITY++++ + + +A + ++ + P + T+N ++ GLC + A LV
Sbjct: 485 ITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVF 544
Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
+ + +YT +I+ EG +A+ ++ KG
Sbjct: 545 MINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 195 bits (496), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 200/390 (51%), Gaps = 1/390 (0%)
Query: 55 KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
++S +P +V T + ++ LC +L+ A+ L ++ P V++ ++ C+
Sbjct: 197 RMSVSP-DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGV 255
Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
A L M G PD +YN+L++G+C G ++EA++F NDM G +P+ IT++I+
Sbjct: 256 GHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNII 315
Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
+ + A K++ +L KG P +VT+ +LI C+ G + + + E M G
Sbjct: 316 LRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGC 375
Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
+ N ++Y+ LL CK ++D A+ L M + G PD+VTY+ ++ LCK KV A++
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435
Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
+ N++ SK SP + ++ GL + +A D + + D + Y+ ++ G
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
+ G + EA++ + + I P+ VTFNS++ G CK+ + A L + G +P+
Sbjct: 496 REGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNET 555
Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
+YT + EG + L LL E+ K +
Sbjct: 556 SYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 199/367 (54%), Gaps = 3/367 (0%)
Query: 9 TGMVHDAVFVIAKMKELDLKVSIQTYNSLL-YNLRHTDI--MWDLYDDIKVSETPRNVYT 65
+G + A+ V+ +M + D + TY L+ R + + L D+++ +V T
Sbjct: 217 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT 276
Query: 66 NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
+++++G+C++ RL +AI FL + P+V++ N I+ C G A+ L ML
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336
Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
+ G P ++NILI+ LC G + A++ M +HG +P++++Y+ L GF ++
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396
Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
A + +++++ +G PDIVTY ++ C+ G VE+ +++ + S+G +I Y+ ++
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456
Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
+ K+G+ +A+ LL EM A LKPD +TYS L+ GL ++ KV +AI+ ++E I
Sbjct: 457 DGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIR 516
Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
PN+ +I+LGLC+ A + +I C + Y I+I+G G EA++L
Sbjct: 517 PNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALEL 576
Query: 366 YRQLIEK 372
+L K
Sbjct: 577 LNELCNK 583
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 187/428 (43%), Gaps = 53/428 (12%)
Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
++ F L + + L M ++G ++E L M G PD++ + LIRG C+ K
Sbjct: 94 VNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKT 153
Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
KA ++ IL G S + DV+ YN+M
Sbjct: 154 RKAAKILE----------------ILEG-------------------SGAVPDVITYNVM 178
Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
I GY K G I A+ + ++ +SP +VT+N+++ C +GK+ A +LD +
Sbjct: 179 ISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC 235
Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
P +TYT + A C + + + LL EM + P VTY V++ G+CK+ +L EA++
Sbjct: 236 YPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295
Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
L DM G P+ IT+N I+RS C A +LL M P+ T+NILI+ LC
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
G L A +L + +H ++Y ++ C E + +A+ + +MV +G I
Sbjct: 356 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415
Query: 590 DYTKSFFCMMLSNGFPPDQEI--------CEVMLIAFH-------QGGDLGSVFELAAVM 634
Y + EI C +LI ++ + G G +L M
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 635 IKSGLLPD 642
L PD
Sbjct: 476 RAKDLKPD 483
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 161/342 (47%), Gaps = 38/342 (11%)
Query: 8 RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
R V A+ ++ +M++ + TYN L+ + D +D+ S NV
Sbjct: 251 RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310
Query: 65 TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
T++I++ +C R DA L + K F PSVV+ N +++ C+ G A + M
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370
Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
++G P++ SYN L+HG C M+ A+E+ M G PD +TY+ + ++
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430
Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
A +++ +L KG P ++TY +I G + G + +KL + M ++ K + I YS L
Sbjct: 431 EDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSL 490
Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI----------- 293
+ + + G++DEA+ +E E +G++P+ VT++ ++ GLCK + +AI
Sbjct: 491 VGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGC 550
Query: 294 ------------------------QLYNEMCSKRISPNSFAH 311
+L NE+C+K + S A
Sbjct: 551 KPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAE 592
Score = 115 bits (289), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 130/284 (45%), Gaps = 18/284 (6%)
Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
V N+ + + G++ + + L+ + HG P + TT + +C G ++ +L+
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
+E P +TY V+I G CK ++ A+ +L+ M V+PD +TYNTI+RS C
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219
Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
L++A ++L++M + P TY ILI+ C + + +A LL +++ + V Y
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNG 603
++ C EG + +A+ F M G + ++ + + ML G
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
F P +++ + G LG ++ M + G P+ N
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYN 383
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 259 bits (662), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 161/559 (28%), Positives = 273/559 (48%), Gaps = 15/559 (2%)
Query: 78 RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
+L DA+ E PS+V N ++S K+ ++ L M + D +SYN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
ILI+ C + AL M + G EPD +T S L G+ +IS A ++ ++ +
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
P+ VT+ LI G E + L + M+++G + ++ Y +++ +CK G ID A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
L LL +ME ++ D+V Y+ +I LC V+ A+ L+ EM +K I PN + +++
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
LC ++A +I +VV ++ +ID +VK G + EA +LY ++I++ I P
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
I T++SLI GFC + ++ +A+ + + + P+ VTY T + +C+ ++ + L +
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
EM + + VTY +I+GL + A ++ + M GV PD ITY+ ++ CK
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479
Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
L KA + + +EP TYNI+I+G+C G +++ L SL + + YT
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539
Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKG-----------FEISIRDYTKS----FFCMMLSN 602
T+I C +G +A F +M E G +RD K+ M S
Sbjct: 540 TMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSC 599
Query: 603 GFPPDQEICEVMLIAFHQG 621
GF D +++ H G
Sbjct: 600 GFVGDASTISMVINMLHDG 618
Score = 233 bits (593), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 148/549 (26%), Positives = 268/549 (48%), Gaps = 58/549 (10%)
Query: 18 VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQS 77
IAKM + DL +S+ + NLR I +DLY + +I+I+ C++S
Sbjct: 89 AIAKMNKFDLVISL---GERMQNLR---ISYDLY-------------SYNILINCFCRRS 129
Query: 78 RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
+L A+ L + + P +V+L+++++ YC A L M P+ ++N
Sbjct: 130 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFN 189
Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
LIHGL + EA+ + M G +PD TY + G I A +++K+
Sbjct: 190 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG 249
Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
+ D+V YT +I C NV + L L M ++G + NV+ Y+ L+ +C GR +A
Sbjct: 250 KIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA 309
Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
LL +M + P++VT+S LI K+ K+ +A +LY+EM + I P+ F + +++ G
Sbjct: 310 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 369
Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
C + + EA+ F+ +I +C +VV YN +I G+ K + E ++L+R++ ++ + +
Sbjct: 370 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN 429
Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
VT+N+LI G + G A+++ + G+ P +TY+ ++ C+ G +++ L + +
Sbjct: 430 TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 489
Query: 438 EMETKAIGPTHVTYTVVIKGLCKQ------WKL--------------------------- 464
++ + P TY ++I+G+CK W L
Sbjct: 490 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 549
Query: 465 --QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM----WLHNLEPTS 518
+EA L +M G P+ TYNT+IR+ + D + +L+ +M ++ + S
Sbjct: 550 LKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTIS 609
Query: 519 ATYNILIDG 527
N+L DG
Sbjct: 610 MVINMLHDG 618
Score = 155 bits (392), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 163/308 (52%), Gaps = 5/308 (1%)
Query: 12 VHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNVYTNS 67
V+DA+ + +M ++ ++ TYNSL+ L R +D L D I+ P NV T S
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP-NVVTFS 329
Query: 68 IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
+ID ++ +L +A E + P + + +++++ +C + AK +F LM+
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
P+ +YN LI G C A +EE +E +M + G+ + +TY+ L +G A
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
K+ +K++ G PDI+TY++L+ G C+ G +E+ L + E + + ++ Y++++
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 509
Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
MCK+G++++ L + G+KP+++ Y+ +I G C++ +A L+ EM PN
Sbjct: 510 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 569
Query: 308 SFAHGAIL 315
S + ++
Sbjct: 570 SGTYNTLI 577
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 258 bits (660), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 140/507 (27%), Positives = 269/507 (53%), Gaps = 3/507 (0%)
Query: 30 SIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
SI +N LL ++ D++ L + ++ N+YT +I+I+ C++S++ A+ L
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68
Query: 87 QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
+ + PS+V+L+++++ YC A L M++ G PD ++ LIHGL +
Sbjct: 69 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128
Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
EA+ + M + G +P+ +TY ++ G I A+ ++ K+ + D+V +
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 188
Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
+I C+ +V++ L L + M ++G + NV+ YS L+S +C GR +A LL +M
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248
Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
+ P+LVT++ LI K+ K +A +L+++M + I P+ F + +++ G C + + +
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308
Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
A+ F+ ++ +C D+ YN +I G+ K + + +L+R++ + + VT+ +LI
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
G +G +A+++ + G+ P +TY+ ++ C G +++ L + M+ I
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428
Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
YT +I+G+CK K+ + L + + GV P+ +TYNT+I C + L++A+ LL
Sbjct: 429 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 488
Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGD 533
+M P S TYN LI +GD
Sbjct: 489 KKMKEDGPLPDSGTYNTLIRAHLRDGD 515
Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/467 (28%), Positives = 243/467 (52%)
Query: 102 NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR 161
N +++ +C+ +A L M+K G P + + L++G C + +A+ + M
Sbjct: 49 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 108
Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
G PD IT++ L G L ++ S A ++ +++ +G P++VTY V++ G C+ G+++
Sbjct: 109 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 168
Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
L M + + +V+ ++ ++ S+CK +D+AL L EME G++P++VTYS LI
Sbjct: 169 AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 228
Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
LC + A QL ++M K+I+PN A++ ++ EA D +I +
Sbjct: 229 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP 288
Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
D+ YN +I+G+ + +A Q++ ++ K P + T+N+LI GFCK+ +V D L
Sbjct: 289 DIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELF 348
Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
+ GL VTYTT + +G+ + ++M + + P +TY++++ GLC
Sbjct: 349 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 408
Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
KL++A+++ + M + D Y T+I CK + + L + L ++P TY
Sbjct: 409 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 468
Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
N +I GLC L+ A LL ++E Y T+I+AH +GD
Sbjct: 469 NTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 515
Score = 248 bits (633), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 161/554 (29%), Positives = 259/554 (46%), Gaps = 50/554 (9%)
Query: 96 PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
PS+ N ++S K+ ++ L M + G+ + ++YNILI+ C + AL
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
M + G EP +T S L G+ +IS A ++ +++ G PD +T+T LI G
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
E + L + M+ +G + N++ Y V+++ +CK G ID A LL +MEA ++ D+V
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
++ +I LCK V A+ L+ EM +K I PN
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPN---------------------------- 219
Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
VV Y+ +I G +A QL +IEK+I+P++VTFN+LI F K GK
Sbjct: 220 -------VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272
Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
+A +L D + ++P TY + +N +C + + + + M +K P TY +I
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332
Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
KG CK ++++ +L +M G+ D +TY T+I+ D A ++ QM +
Sbjct: 333 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 392
Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
P TY+IL+DGLC NG L+ A + +Q+ I L YTT+I+ C G V
Sbjct: 393 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 452
Query: 576 FCQMVEKGFEISIRDYTK--SFFC-------------MMLSNGFPPDQEICEVMLIAFHQ 620
FC + KG + ++ Y S C M +G PD ++ A +
Sbjct: 453 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLR 512
Query: 621 GGDLGSVFELAAVM 634
GD + EL M
Sbjct: 513 DGDKAASAELIREM 526
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 223/466 (47%), Gaps = 15/466 (3%)
Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
+K+ G ++ TY +LI +C+ + L L M+ G++ +++ S LL+ C
Sbjct: 34 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 93
Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
RI +A+ L+ +M +G +PD +T++ LI GL +K +A+ L + M + PN +
Sbjct: 94 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 153
Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
G ++ GLC++ I A + + + DVV++N +ID K ++ +A+ L++++
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213
Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
K I P++VT++SLI C G+ +DA +LL + + P+ VT+ ++A+ +EG
Sbjct: 214 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 273
Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
L +M ++I P TY +I G C +L +A Q+ E M PD TYNT+I+
Sbjct: 274 AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 333
Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
FCK K + +L +M L + TY LI GL +GD NA + + +
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393
Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFF 596
+ Y+ ++ C G + KA+ F M + ++ I YT F
Sbjct: 394 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 453
Query: 597 CMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
C + G P+ M+ L + L M + G LPD
Sbjct: 454 CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPD 499
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 211/439 (48%), Gaps = 3/439 (0%)
Query: 6 YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
Y + DAV ++ +M E+ + T+ +L++ L L D + N
Sbjct: 90 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 149
Query: 63 VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
+ T +V++GLC++ + A L + + VV N I+ CK + A LF
Sbjct: 150 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 209
Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
M G+ P+ +Y+ LI LC G +A + +DM + P+ +T++ L F
Sbjct: 210 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 269
Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
+ A K+ ++ + DPDI TY LI G+C +++ ++ E M+S+ ++ Y+
Sbjct: 270 KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYN 329
Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
L+ CKS R+++ L EM GL D VTY+ LI+GL A +++ +M S
Sbjct: 330 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 389
Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
+ P+ + +L GLC + +A FD + S D+ +Y MI+G K G + +
Sbjct: 390 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 449
Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
L+ L K + P++VT+N++I G C + +A LL +K G P + TY T + A
Sbjct: 450 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Query: 423 YCEEGNIQRLLALLQEMET 441
+ +G+ L++EM +
Sbjct: 510 HLRDGDKAASAELIREMRS 528
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 147/323 (45%), Gaps = 9/323 (2%)
Query: 10 GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTN 66
G DA +++ M E + ++ T+N+L+ + L+DD+ +++T
Sbjct: 234 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 293
Query: 67 SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
+ +I+G C RL A + K+ P + + N ++ +CK E LF M
Sbjct: 294 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH 353
Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
GL D +Y LI GL G + A + M GV PD +TYSIL G ++
Sbjct: 354 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 413
Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
A +V + DI YT +I G C+ G V++G L + +G K NV+ Y+ ++S
Sbjct: 414 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 473
Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
+C + EA LL +M+ G PD TY+ LIR + + +L EM S R
Sbjct: 474 GLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR--- 530
Query: 307 NSFAHGAILLGLCEKEMITEARM 329
F A +GL M+ + R+
Sbjct: 531 --FVGDASTIGLVA-NMLHDGRL 550
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 129/294 (43%), Gaps = 15/294 (5%)
Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
+++ R PSI FN L+ K K L + ++ G+ + TY +N +C
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
I LALL +M P+ VT + ++ G C ++ +AV L++ M +G PD IT+ T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
+I +A L+++M +P TY ++++GLC GD+ A LL ++
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM---------- 598
I V + TII + C V A+ F +M KG ++ Y+ C+
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 599 -----MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
M+ P+ ++ AF + G +L MIK + PD F N
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYN 294
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 258 bits (659), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 159/566 (28%), Positives = 277/566 (48%), Gaps = 16/566 (2%)
Query: 78 RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
+ DA+ ++ P+V+ N + S K E+ L M G+ ++ +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
I+I+ C + A + + G EPD + ++ L G L ++S A +++ +++
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
G P ++T L+ G C G V + + L + M+ GF+ N + Y +L+ MCKSG+ A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
+ LL +ME +K D V YSI+I GLCK + A L+NEM K + + ++ G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
C + +I +VV ++++ID +VK G + EA QL ++++++ I+P+
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
+T+NSLI GFCK ++ +A +++D + G +P +T+ +N YC+ I L L +
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427
Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
EM + + VTY +++G C+ KL+ A +L ++M V PD ++Y ++ C
Sbjct: 428 EMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487
Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
+L KA ++ ++ +E Y I+I G+C + +A L SL + L AY
Sbjct: 488 ELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYN 547
Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIR------DYTKS--FFCMMLSN 602
+I C + + KA F +M E+G + I IR D T + M S+
Sbjct: 548 IMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSS 607
Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVF 628
GFP D + M+I G+L F
Sbjct: 608 GFPADVSTVK-MVINMLSSGELDKSF 632
Score = 256 bits (655), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 150/561 (26%), Positives = 266/561 (47%), Gaps = 2/561 (0%)
Query: 43 HTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLN 102
D DL+ D+ S V + + + + + + + ++ K S+ +L+
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 103 AIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH 162
+++ +C+ A ++K G PD +N L++GLC+ + EALE + M
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 163 GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
G +P IT + L G L ++S A +I +++ G P+ VTY ++ C+ G
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
++L M + KL+ + YS+++ +CK G +D A L EME G K D++TY+ LI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
C + +L +M ++ISPN ++ ++ + EA ++ +
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
+ YN +IDG+ K + EA+Q+ +I K P I+TFN LI G+CK ++ D L
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427
Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
+ L G+ + VTY T + +C+ G ++ L QEM ++ + P V+Y +++ GLC
Sbjct: 428 EMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487
Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
+L++A+++ + + D Y II C + A+ L + L ++ + YN
Sbjct: 488 ELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYN 547
Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
I+I LC L AD L + E + ++ Y +I+AH + D A +M
Sbjct: 548 IMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSS 607
Query: 583 GFEISIRDYTKSFFCMMLSNG 603
GF + T MLS+G
Sbjct: 608 GFPADVS--TVKMVINMLSSG 626
Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 211/416 (50%), Gaps = 3/416 (0%)
Query: 9 TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYT 65
G V DAV +I +M E + + TY +L + T + +L ++ +
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 66 NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
SI+IDGLC+ L +A E K F +++ N ++ +C G + L M+
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
K + P+ ++++LI G + EA + +M + G+ P+ ITY+ L GF +++
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
A +++ ++ KG DPDI+T+ +LI GYC+ +++GL+L M +G N + Y+ L+
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
C+SG+++ A L EM + ++PD+V+Y IL+ GLC ++ KA++++ ++ ++
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505
Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
+ + I+ G+C + +A F SL + D YNIMI + ++ +A L
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADIL 565
Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
+R++ E+ +P +T+N LI + A L++ +K G T +N
Sbjct: 566 FRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN 621
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 210/442 (47%), Gaps = 20/442 (4%)
Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
P ++ + L + E L L + M S+G ++ S++++ C+ ++ A
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
+ ++ +G +PD V ++ L+ GLC + +V +A++L + M P ++ GLC
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
+++A + D ++ + + V Y +++ K G A++L R++ E+ I V
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
++ +I G CK+G + +A L + +++ G + +TY T + +C G LL++M
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
+ I P VT++V+I K+ KL+EA QLL++M G+ P+ ITYN++I FCK L
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
+A Q+++ M +P T+NILI+G C + + L + + V Y T++
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQ 620
+ C G + A F +MV + I Y +++L
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY--------------------KILLDGLCD 485
Query: 621 GGDLGSVFELAAVMIKSGLLPD 642
G+L E+ + KS + D
Sbjct: 486 NGELEKALEIFGKIEKSKMELD 507
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 192/419 (45%), Gaps = 15/419 (3%)
Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
++Y LSS + D+A+ L +M P ++ ++ L + K + + L +
Sbjct: 54 LSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQ 113
Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
M SK I+ + + ++ C ++ A ++ D V++N +++G
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
+ EA++L +++E P+++T N+L+ G C NGKV+DA L+D + G +P+ VTY
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
+N C+ G + LL++ME + I V Y+++I GLCK L A L +M + G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
D ITYNT+I FC +LL M + P T+++LID G L+ AD
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIRDY 591
LL + + I+ + Y ++I C E + +A+ M+ KG F I I Y
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 592 TKS--------FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
K+ F M G + ++ F Q G L +L M+ + PD
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 201/384 (52%), Gaps = 3/384 (0%)
Query: 5 VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR 61
V ++G A+ ++ KM+E ++K+ Y+ ++ L D ++L++++++
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 296
Query: 62 NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
++ T + +I G C R D L++ ++ P+VV+ + ++ + K G A L
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356
Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
M++ G+ P+ +YN LI G C +EEA++ + M G +PD +T++IL G+
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
++I ++ +++ ++G + VTY L+ G+CQ G +E KL + M+S+ + ++++Y
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
+LL +C +G +++AL + ++E ++ D+ Y I+I G+C KV A L+ +
Sbjct: 477 KILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
K + ++ A+ ++ LC K+ +++A + F + D + YNI+I ++ +
Sbjct: 537 KGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATT 596
Query: 362 AVQLYRQLIEKRISPSIVTFNSLI 385
A +L ++ + T +I
Sbjct: 597 AAELIEEMKSSGFPADVSTVKMVI 620
Score = 33.5 bits (75), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/148 (18%), Positives = 65/148 (43%), Gaps = 4/148 (2%)
Query: 9 TGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYT 65
G + A+ + K+++ +++ I Y +++ N D WDL+ + + +
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 545
Query: 66 NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
+I+I LC++ L A + ++ + P ++ N ++ + A A L M
Sbjct: 546 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMK 605
Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEAL 153
G D + ++I+ L +G ++++
Sbjct: 606 SSGFPADVSTVKMVINMLS-SGELDKSF 632
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 256 bits (653), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 163/565 (28%), Positives = 276/565 (48%), Gaps = 25/565 (4%)
Query: 79 LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
L++AI + P S N ++ R+ KLG + K F M+ G P F+YNI
Sbjct: 208 LEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNI 267
Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
+I +C G +E A +M G+ PD +TY+ + GF + ++ +++
Sbjct: 268 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 327
Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
+PD++TY LI +C+ G + GL+ M G K NV++YS L+ + CK G + +A+
Sbjct: 328 CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAI 387
Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
+M VGL P+ TY+ LI CK + A +L NEM + N + A++ GL
Sbjct: 388 KFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGL 447
Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
C+ E + EA F + + I ++ YN +I G+VK N+ A++L +L + I P +
Sbjct: 448 CDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDL 507
Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
+ + + I+G C K+ A+ +++ +K G++ +++ YTT M+AY + GN L LL E
Sbjct: 508 LLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDE 567
Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV-IGVTPDQITYNTIIRSFCKCK 497
M+ I T VT+ V+I GLCK + +AV + G+ + + +I CK
Sbjct: 568 MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDN 627
Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
+ A L QM L P Y L+DG G++ A L + E + L +AYT
Sbjct: 628 QVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYT 687
Query: 558 TIIK--AHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVML 615
+++ +HC + + KA +F +M+ +G PD+ +C +L
Sbjct: 688 SLVWGLSHCNQ--LQKARSFLEEMIGEGIH--------------------PDEVLCISVL 725
Query: 616 IAFHQGGDLGSVFELAAVMIKSGLL 640
++ G + EL + ++K LL
Sbjct: 726 KKHYELGCIDEAVELQSYLMKHQLL 750
Score = 241 bits (615), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 145/511 (28%), Positives = 254/511 (49%), Gaps = 4/511 (0%)
Query: 10 GMVHDAVFVIAKMKELDLKVSIQTYNSLLYN---LRHTDIMWDLYDDIKVSETPRNVYTN 66
GM+ +A+ +KMK + ++ N LL+ L TD + + D+ + V+T
Sbjct: 206 GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTY 265
Query: 67 SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
+I+ID +C++ ++ A +E + P V+ N+++ + K+G + F M
Sbjct: 266 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 325
Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
PD +YN LI+ C G + LEF +M +G++P+ ++YS L F +
Sbjct: 326 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ 385
Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
A K + G P+ TYT LI C+IGN+ + +L ML G + NV+ Y+ L+
Sbjct: 386 AIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 445
Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
+C + R+ EA L +M+ G+ P+L +Y+ LI G K + +A++L NE+ + I P
Sbjct: 446 GLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 505
Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
+ +G + GLC E I A++ + + + ++Y ++D Y K GN E + L
Sbjct: 506 DLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL 565
Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH-GLEPSAVTYTTFMNAYCE 425
++ E I ++VTF LI G CKN V+ A + I GL+ +A +T ++ C+
Sbjct: 566 DEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCK 625
Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
+ ++ L ++M K + P YT ++ G KQ + EA+ L + M IG+ D +
Sbjct: 626 DNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLA 685
Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
Y +++ C L+KA L +M + P
Sbjct: 686 YTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 716
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 131/498 (26%), Positives = 232/498 (46%), Gaps = 36/498 (7%)
Query: 96 PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
P +A+ S LG E A F M ++ + P S N L+H G ++ F
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
DM G P TY+I+ + A + +++ +G PD VTY +I G+ +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
+G +++ + E M + +VI Y+ L++ CK G++ L EM+ GLKP++V+
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
YS L+ CK+ + +AI+ Y +M + PN + + SLI
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT--------------------YTSLI 409
Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
+NC K+GN+ +A +L ++++ + ++VT+ +LI G C ++
Sbjct: 410 DANC---------------KIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMK 454
Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
+A L + G+ P+ +Y ++ + + N+ R L LL E++ + I P + Y I
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514
Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
GLC K++ A ++ +M G+ + + Y T++ ++ K + + LL++M ++E
Sbjct: 515 WGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 574
Query: 516 PTSATYNILIDGLCVNGDLKNA-DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
T T+ +LIDGLC N + A D + + +T +I C + V A T
Sbjct: 575 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATT 634
Query: 575 FFCQMVEKGFEISIRDYT 592
F QMV+KG YT
Sbjct: 635 LFEQMVQKGLVPDRTAYT 652
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 209/434 (48%), Gaps = 4/434 (0%)
Query: 6 YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRN 62
+ + G + D V +MK++ + + TYN+L+ I + Y ++K + N
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366
Query: 63 VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
V + S ++D C++ +Q AI F + P+ + +++ CK+G A L
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426
Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
ML+ G+ + +Y LI GLC A M+EA E M GV P+ +Y+ L GF
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486
Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
+ A +++ +L +G PD++ Y I G C + +E + M G K N + Y+
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 546
Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
L+ + KSG E L LL EM+ + ++ +VT+ +LI GLCK V KA+ +N + +
Sbjct: 547 TLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISND 606
Query: 303 -RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
+ N+ A++ GLC+ + A F+ ++ + D Y ++DG K GN+ E
Sbjct: 607 FGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLE 666
Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
A+ L ++ E + ++ + SL++G ++ AR L+ + G+ P V + +
Sbjct: 667 ALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLK 726
Query: 422 AYCEEGNIQRLLAL 435
+ E G I + L
Sbjct: 727 KHYELGCIDEAVEL 740
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 163/355 (45%), Gaps = 36/355 (10%)
Query: 327 ARMYFDS------LIMSNCIQDV--VLY---NIMIDGY----------VKLGNIGEAVQL 365
ARMY+D+ +++S DV VL+ N+ + G+ + LG + EA+Q
Sbjct: 155 ARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQC 214
Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
+ ++ R+ P + N L++ F K GK D +R + G P+ TY ++ C+
Sbjct: 215 FSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCK 274
Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
EG+++ L +EM+ + + P VTY +I G K +L + V E+M + PD IT
Sbjct: 275 EGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVIT 334
Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
YN +I FCK L + +M + L+P +Y+ L+D C G ++ A V ++
Sbjct: 335 YNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR 394
Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT------------- 592
+ + YT++I A+C G++ A +M++ G E ++ YT
Sbjct: 395 RVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMK 454
Query: 593 --KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
+ F M + G P+ ++ F + ++ EL + G+ PD L
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 509
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 253 bits (647), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 174/598 (29%), Positives = 289/598 (48%), Gaps = 40/598 (6%)
Query: 5 VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIM-----WDLYDDIKVSE 58
Y G H A+ + KM L LK ++ T N+LL L R+ +++DD+
Sbjct: 140 AYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIG 199
Query: 59 TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGK-EFGPSVVSLNAIMSRYCKLGFAEVA 117
NV T +++++G C + +L+DA+ L+ + + P V+ N I+ K G
Sbjct: 200 VSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDL 259
Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
K L M K GL P+ +YN L++G C GS++EA + M + V PD TY+IL G
Sbjct: 260 KELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILING 319
Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
+ +++ + PD+VTY LI G ++G E KL E M + G K N
Sbjct: 320 LCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKAN 379
Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEM-EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
+ +++ L +CK + + + E+ + G PD+VTY LI+ K + A+++
Sbjct: 380 QVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMM 439
Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
EM K I N+ IL LC++ + EA +S I D V Y +I G+ +
Sbjct: 440 REMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFRE 499
Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
+ +A++++ ++ + +I+P++ TFNSLI G C +GK A D + GL P T+
Sbjct: 500 EKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTF 559
Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ----LLE 472
+ + YC+EG +++ E + P + T +++ GLCK+ ++A+ L+E
Sbjct: 560 NSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIE 619
Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
+ V D +TYNT+I +FCK K L++A+ LL++M LEP TYN I L +G
Sbjct: 620 EREV-----DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDG 674
Query: 533 DLKNADCLL-----------------------VSLQEHNISLTKVAYTTIIKAHCAEG 567
L D LL S + ++ +AY+ +I C+ G
Sbjct: 675 KLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRG 732
Score = 247 bits (630), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/559 (27%), Positives = 287/559 (51%), Gaps = 8/559 (1%)
Query: 50 LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIM---S 106
L+ ++ +S P + I + + + A+ Q+ + P++++ N ++
Sbjct: 119 LHPNLHLSPPPSKALFD-IALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLV 177
Query: 107 RYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM-GRHGVE 165
RY A+ +F M+K G+ + ++N+L++G C+ G +E+AL M V
Sbjct: 178 RYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVN 237
Query: 166 PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL 225
PD +TY+ + K ++S +++ + G P+ VTY L+ GYC++G+++E ++
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297
Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
E+M ++ Y++L++ +C +G + E L L+ M+++ L+PD+VTY+ LI G +
Sbjct: 298 VELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFE 357
Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI-MSNCIQDVV 344
+A +L +M + + N H L LC++E L+ M D+V
Sbjct: 358 LGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIV 417
Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
Y+ +I Y+K+G++ A+++ R++ +K I + +T N+++ CK K+ +A LL++
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSA 477
Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
G VTY T + + E +++ L + EM+ I PT T+ +I GLC K
Sbjct: 478 HKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKT 537
Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
+ A++ +++ G+ PD T+N+II +CK + KAF+ N+ H+ +P + T NIL
Sbjct: 538 ELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNIL 597
Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
++GLC G + A +L E + V Y T+I A C + + +A +M EKG
Sbjct: 598 LNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGL 656
Query: 585 EISIRDYTKSFFCMMLSNG 603
E Y SF +++ +G
Sbjct: 657 EPDRFTYN-SFISLLMEDG 674
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 220/469 (46%), Gaps = 24/469 (5%)
Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK---SGRIDEA 257
P + + + Y G L++ + M+ K N++ + LL + + S I A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK-RISPNSFAHGAILL 316
+ +M +G+ ++ T+++L+ G C + K+ A+ + M S+ +++P++ + IL
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
+ +K +++ + + + + + V YN ++ GY KLG++ EA Q+ + + + P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
+ T+N LI G C G + + L+D +K L+P VTY T ++ E G L+
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQ---EAVQLLEDMYVIGVTPDQITYNTIIRSF 493
++ME + VT+ + +K LCK+ K + V+ L DM+ G +PD +TY+T+I+++
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMH--GFSPDIVTYHTLIKAY 426
Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
K DL A +++ +M ++ + T N ++D LC L A LL S + + +
Sbjct: 427 LKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDE 486
Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCM 598
V Y T+I E V KA+ + +M + ++ + F
Sbjct: 487 VTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDE 546
Query: 599 MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
+ +G PD +++ + + G + FE IK PD + N
Sbjct: 547 LAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCN 595
Score = 162 bits (410), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 115/489 (23%), Positives = 224/489 (45%), Gaps = 57/489 (11%)
Query: 2 LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR 61
L + Y + G + +A ++ MK+ ++ + TYN L
Sbjct: 281 LVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNIL------------------------ 316
Query: 62 NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
I+GLC +++ + + + P VV+ N ++ +LG + A+ L
Sbjct: 317 --------INGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM-GRHGVEPDAITYSILAKGFHL 180
M G+ + ++NI + LC E ++ HG PD +TY L K +
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428
Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
+ +SGA ++++++ KG + +T ++ C+ ++E L +GF ++ +
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488
Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
Y L+ + ++++AL + EM+ V + P + T++ LI GLC K A++ ++E+
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELA 548
Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
+ P+ +I+LG C++ + +A +++ I + D NI+++G K G
Sbjct: 549 ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTE 608
Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
+A+ + LIE+R VT+N++I FCK+ K+ +A LL ++ GLEP TY +F+
Sbjct: 609 KALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFI 667
Query: 421 NAYCEEGNIQRLLALLQ-------------EMETKAIGPTH----------VTYTVVIKG 457
+ E+G + LL+ ++ET+ T + Y+ VI
Sbjct: 668 SLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDE 727
Query: 458 LCKQWKLQE 466
LC + +L+E
Sbjct: 728 LCSRGRLKE 736
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 253 bits (645), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 160/583 (27%), Positives = 266/583 (45%), Gaps = 39/583 (6%)
Query: 79 LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
L DAI F + V N ++ + ++ +VA L+ M + + +S+NI
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI------- 191
LI C + +L + + G +PD +T++ L G L +IS A +
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 192 --------QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
+++ G P ++T+ LI G C G V E L M+ +G ++V+ Y
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
+++ MCK G AL LL +ME +KPD+V YS +I LCK A L++EM K
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
I+PN F + ++ G C ++A+ +I DV+ +N +I VK G + EA
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
+L +++ + I P VT+NS+IYGFCK+ + DA+ + D + P VT+ T ++ Y
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVY 442
Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
C + + LL+E+ + + TY +I G C+ L A L ++M GV PD
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502
Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
IT N ++ FC+ + L +A +L + + ++ + YNI+I G+C + A L S
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS 562
Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
L H + Y +I C + + A F +M + NG
Sbjct: 563 LPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD--------------------NG 602
Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLI 646
PD ++ + G++ EL + M +G D F I
Sbjct: 603 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 645
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/544 (25%), Positives = 249/544 (45%), Gaps = 49/544 (9%)
Query: 41 LRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVS 100
+ D+ LY +++ P N+Y+ +I+I C +L ++ + F P VV+
Sbjct: 119 MNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVT 178
Query: 101 LNAIMSRYC----------------KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLC 144
N ++ C + GF E A LF M++ GL P ++N LI+GLC
Sbjct: 179 FNTLLHGLCLEDRISEALALFGYMVETGFLE-AVALFDQMVEIGLTPVVITFNTLINGLC 237
Query: 145 IAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
+ G + EA N M G+ D +TY + G + A ++ K+ PD+V
Sbjct: 238 LEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVV 297
Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
Y+ +I C+ G+ + L ML +G NV Y+ ++ C GR +A LL +M
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357
Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
+ PD++T++ LI K+ K+ +A +L +EM + I P++ + +++ G C+
Sbjct: 358 IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF 417
Query: 325 TEARMYFD-----SLIMSNCIQDV--------------------------VLYNIMIDGY 353
+A+ FD ++ N I DV YN +I G+
Sbjct: 418 DDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 477
Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
++ N+ A L++++I + P +T N L+YGFC+N K+ +A L + I++ ++
Sbjct: 478 CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDT 537
Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
V Y ++ C+ + L + + P TY V+I G C + + +A L
Sbjct: 538 VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 597
Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
M G PD TYNT+IR K ++ K+ +L+++M + + T ++ D L +G
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGR 656
Query: 534 LKNA 537
L +
Sbjct: 657 LDKS 660
Score = 199 bits (505), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 122/487 (25%), Positives = 239/487 (49%), Gaps = 24/487 (4%)
Query: 18 VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD------------------LYDD-IKVSE 58
K+ +L + + T+N+LL+ L D + + L+D +++
Sbjct: 163 TFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGL 222
Query: 59 TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
TP V T + +I+GLC + R+ +A + + GK VV+ I++ CK+G + A
Sbjct: 223 TPV-VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL 281
Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
L M + + PD Y+ +I LC G +A ++M G+ P+ TY+ + GF
Sbjct: 282 NLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGF 341
Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
+ S A ++++ ++ + +PD++T+ LI + G + E KL + ML + +
Sbjct: 342 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 401
Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
+ Y+ ++ CK R D+A + M + PD+VT++ +I C+ +V + +QL E
Sbjct: 402 VTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLRE 457
Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
+ + + N+ + ++ G CE + + A+ F +I D + NI++ G+ +
Sbjct: 458 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 517
Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
+ EA++L+ + +I V +N +I+G CK KV +A L ++ +HG+EP TY
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577
Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
++ +C + I L +M+ P + TY +I+G K ++ ++++L+ +M G
Sbjct: 578 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637
Query: 479 VTPDQIT 485
+ D T
Sbjct: 638 FSGDAFT 644
Score = 166 bits (419), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 109/462 (23%), Positives = 205/462 (44%), Gaps = 44/462 (9%)
Query: 206 YTVLICG-----YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
YT + C + ++ + + L M + LN+ ++++L+ C ++ +L
Sbjct: 104 YTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLST 163
Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA---------------IQLYNEMCSKRIS 305
++ +G +PD+VT++ L+ GLC +D++ +A + L+++M ++
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT 223
Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
P ++ GLC + + EA + ++ DVV Y +++G K+G+ A+ L
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
++ E I P +V ++++I CK+G +DA+ L + G+ P+ TY ++ +C
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
G LL++M + I P +T+ +I K+ KL EA +L ++M + PD +T
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403
Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
YN++I FCK A + + M P T+N +ID C + LL +
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFP 605
+ Y T+I C +++ A F +M+ S+G
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI--------------------SHGVC 499
Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
PD C ++L F + L EL V+ S + D N
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 3/204 (1%)
Query: 5 VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPR 61
VY R V + + ++ ++ L + TYN+L++ D + DL+ ++
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Query: 62 NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
+ T +I++ G C+ +L++A+ + + V+ N I+ CK + A LF
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
C + +G+ PD +YN++I G C ++ +A + M +G EPD TY+ L +G
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKA 620
Query: 182 SQISGAWKVIQKLLIKGSDPDIVT 205
+I + ++I ++ G D T
Sbjct: 621 GEIDKSIELISEMRSNGFSGDAFT 644
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 250 bits (638), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 149/527 (28%), Positives = 251/527 (47%), Gaps = 35/527 (6%)
Query: 92 KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
K P V ++ +CK G E A LF M + G+ P+ ++N +I GL + G +E
Sbjct: 267 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 326
Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
A F M G+EP ITYSIL KG +I A+ V++++ KG P+++ Y LI
Sbjct: 327 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 386
Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG--- 268
+ + G++ + ++++++M+S+G L Y+ L+ CK+G+ D A LL EM ++G
Sbjct: 387 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 446
Query: 269 --------------------------------LKPDLVTYSILIRGLCKQDKVHKAIQLY 296
+ P + LI GLCK K KA++L+
Sbjct: 447 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 506
Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
+ +K ++ A+L GLCE + EA ++ C+ D V YN +I G
Sbjct: 507 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 566
Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
+ EA +++++ + P T++ LI G KV +A + D K +G+ P TY
Sbjct: 567 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 626
Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
+ ++ C+ + EM +K + P V Y +I+ C+ +L A++L EDM
Sbjct: 627 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 686
Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
G++P+ TY ++I+ + +A L +M + LEP Y LIDG G +
Sbjct: 687 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 746
Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
+CLL + N+ K+ YT +I + +G+V +A +M EKG
Sbjct: 747 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKG 793
Score = 238 bits (608), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 152/539 (28%), Positives = 265/539 (49%), Gaps = 40/539 (7%)
Query: 5 VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETP 60
+ + G V +AV + +KM+E + ++ T+N+++ L R+ + ++ P
Sbjct: 282 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 341
Query: 61 RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
+ T SI++ GL + R+ DA L+E K F P+V+ N ++ + + G A +
Sbjct: 342 -TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 400
Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGS-------------------------------- 148
LM+ GL + +YN LI G C G
Sbjct: 401 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 460
Query: 149 ---MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
+ AL F +M + P + L G + S A ++ + L KG D T
Sbjct: 461 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRT 520
Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
L+ G C+ G ++E ++++ +L +G ++ ++Y+ L+S C ++DEA L EM
Sbjct: 521 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 580
Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
GLKPD TYSILI GL +KV +AIQ +++ + P+ + + ++ G C+ E
Sbjct: 581 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 640
Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
E + +FD ++ N + V+YN +I Y + G + A++L + K ISP+ T+ SLI
Sbjct: 641 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 700
Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
G +V +A+ L + +++ GLEP+ YT ++ Y + G + ++ LL+EM +K +
Sbjct: 701 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 760
Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
P +TYTV+I G + + EA +LL +M G+ PD ITY I + K + +AF+
Sbjct: 761 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819
Score = 166 bits (419), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 123/491 (25%), Positives = 215/491 (43%), Gaps = 21/491 (4%)
Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
AL+ + G+ P T +IL ++ + ++ KG PD+ +T I
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAIN 281
Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
+C+ G VEE +KL M G NV+ ++ ++ + GR DEA +M G++P
Sbjct: 282 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 341
Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
L+TYSIL++GL + ++ A + EM K PN + ++ E + +A
Sbjct: 342 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 401
Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
D ++ YN +I GY K G A +L ++++ + + +F S+I C +
Sbjct: 402 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 461
Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
A R + + L + P TT ++ C+ G + L L + K T
Sbjct: 462 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 521
Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
++ GLC+ KL EA ++ +++ G D+++YNT+I C K L +AF L++M
Sbjct: 522 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 581
Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
L+P + TY+ILI GL ++ A + + + Y+ +I C
Sbjct: 582 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK------ 635
Query: 572 AMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
+ E+G E FF M+S P+ + ++ A+ + G L EL
Sbjct: 636 -----AERTEEGQE---------FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 681
Query: 632 AVMIKSGLLPD 642
M G+ P+
Sbjct: 682 EDMKHKGISPN 692
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 73/157 (46%), Gaps = 3/157 (1%)
Query: 5 VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPR 61
Y R+G + A+ + MK + + TY SL+ + + + L++++++
Sbjct: 667 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 726
Query: 62 NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
NV+ + +IDG + ++ L+E K P+ ++ ++ Y + G A L
Sbjct: 727 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 786
Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTND 158
M + G+ PD+ +Y I+G G + EA + +++
Sbjct: 787 NEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 823
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 247 bits (631), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 165/577 (28%), Positives = 284/577 (49%), Gaps = 43/577 (7%)
Query: 49 DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
+L++ +K +V+ +++IDGLC+ R+ DA E + PS+++ N ++ Y
Sbjct: 200 ELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGY 259
Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
CK G E + + M + P ++N L+ GL AG +E+A +M G PDA
Sbjct: 260 CKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDA 319
Query: 169 ITYSILAKGFH-----------------------------LLS------QISGAWKVIQK 193
T+SIL G+ LL+ +I A +++ +
Sbjct: 320 FTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGR 379
Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR-EVMLSQGFKLNVIAYSVLLSSMCKSG 252
+ KG P+ V Y +I GYC+ G++ G +++ E M QG K + +AY+ L+ C+ G
Sbjct: 380 EMAKGLVPNEVIYNTMIDGYCRKGDLV-GARMKIEAMEKQGMKPDHLAYNCLIRRFCELG 438
Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
++ A + +M+ G+ P + TY+ILI G ++ + K + EM PN ++G
Sbjct: 439 EMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYG 498
Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
++ LC+ + EA++ + V +YN++IDG G I +A + +++++K
Sbjct: 499 TLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKK 558
Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
I ++VT+N+LI G GK+++A LL I GL+P TY + ++ Y GN+QR
Sbjct: 559 GIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRC 618
Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY-VIGVTPDQITYNTIIR 491
+AL +EM+ I PT TY ++I LC + E ++L E ++ + + PD + YN ++
Sbjct: 619 IALYEEMKRSGIKPTLKTYHLLI-SLCTK----EGIELTERLFGEMSLKPDLLVYNGVLH 673
Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
+ D+ KAF L QM ++ TYN LI G G L L+ + +
Sbjct: 674 CYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEP 733
Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
Y I+K HC D A ++ +M EKGF + +
Sbjct: 734 EADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDV 770
Score = 236 bits (603), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 152/566 (26%), Positives = 260/566 (45%), Gaps = 17/566 (3%)
Query: 96 PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
PS SL ++ K V +F +L+ P F Y I + + LE
Sbjct: 142 PSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLEL 201
Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
N M + P Y++L G +++ A ++ ++L + P ++TY LI GYC+
Sbjct: 202 FNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCK 261
Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
GN E+ K+RE M + + ++I ++ LL + K+G +++A +L EM+ +G PD T
Sbjct: 262 AGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFT 321
Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
+SIL G +K A+ +Y + N++ +L LC++ I +A +
Sbjct: 322 FSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREM 381
Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
+ + V+YN MIDGY + G++ A + ++ + P + +N LI FC+ G++
Sbjct: 382 AKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEME 441
Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
+A + ++ +KL G+ PS TY + Y + + +L+EME P V+Y +I
Sbjct: 442 NAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI 501
Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
LCK KL EA + DM GV+P YN +I C + AF+ +M +E
Sbjct: 502 NCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE 561
Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
TYN LIDGL + G L A+ LL+ + + Y ++I + G+V + +
Sbjct: 562 LNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIAL 621
Query: 576 FCQMVEKGFEISIRDY--------------TKSFFCMMLSNGFPPDQEICEVMLIAFHQG 621
+ +M G + +++ Y T+ F M PD + +L +
Sbjct: 622 YEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVH 678
Query: 622 GDLGSVFELAAVMIKSGLLPDKFLIN 647
GD+ F L MI+ + DK N
Sbjct: 679 GDMEKAFNLQKQMIEKSIGLDKTTYN 704
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 144/542 (26%), Positives = 239/542 (44%), Gaps = 77/542 (14%)
Query: 6 YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---------------- 49
Y + G + V +MK ++ S+ T+N+LL L ++ D
Sbjct: 259 YCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPD 318
Query: 50 ------LYDDIKVSETPR----------------NVYTNSIVIDGLCQQSRLQDAILFLQ 87
L+D +E N YT SI+++ LC++ +++ A L
Sbjct: 319 AFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILG 378
Query: 88 ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
K P+ V N ++ YC+ G A+ M K G+ PD +YN LI C G
Sbjct: 379 REMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELG 438
Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT-- 205
ME A + N M GV P TY+IL G+ + + +++++ G+ P++V+
Sbjct: 439 EMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYG 498
Query: 206 ---------------------------------YTVLICGYCQIGNVEEGLKLREVMLSQ 232
Y +LI G C G +E+ + + ML +
Sbjct: 499 TLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKK 558
Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
G +LN++ Y+ L+ + +G++ EA LL E+ GLKPD+ TY+ LI G V +
Sbjct: 559 GIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRC 618
Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
I LY EM I P + +L+ LC KE I F + + D+++YN ++
Sbjct: 619 IALYEEMKRSGIKP-TLKTYHLLISLCTKEGIELTERLFGEMSLK---PDLLVYNGVLHC 674
Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
Y G++ +A L +Q+IEK I T+NSLI G K GK+ + R L+D + +EP
Sbjct: 675 YAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPE 734
Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
A TY + +CE + +EM+ K ++ GL ++W+ +EA ++
Sbjct: 735 ADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVIS 794
Query: 473 DM 474
+M
Sbjct: 795 EM 796
Score = 189 bits (480), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 141/543 (25%), Positives = 256/543 (47%), Gaps = 7/543 (1%)
Query: 12 VHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
++DA + +M L S+ TYN+L+ + + + + + +K ++ T +
Sbjct: 230 MNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNT 289
Query: 69 VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
++ GL + ++DA L+E F P + + + Y AE A G++ + G
Sbjct: 290 LLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG 349
Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
+ +A++ +IL++ LC G +E+A E G+ P+ + Y+ + G+ + GA
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGAR 409
Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
I+ + +G PD + Y LI +C++G +E K M +G +V Y++L+
Sbjct: 410 MKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGY 469
Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
+ D+ +L EME G P++V+Y LI LCK K+ +A + +M + +SP
Sbjct: 470 GRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKV 529
Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
+ ++ G C K I +A + ++ ++V YN +IDG G + EA L +
Sbjct: 530 RIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLE 589
Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
+ K + P + T+NSLI G+ G V L + +K G++P+ TY ++ +EG
Sbjct: 590 ISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG- 648
Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
I+ L EM K P + Y V+ +++A L + M + D+ TYN+
Sbjct: 649 IELTERLFGEMSLK---PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNS 705
Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
+I K L + L+++M +EP + TYNI++ G C D +A +QE
Sbjct: 706 LILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKG 765
Query: 549 ISL 551
L
Sbjct: 766 FLL 768
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 125/514 (24%), Positives = 224/514 (43%), Gaps = 20/514 (3%)
Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
FSY +L L + + EA + + G+ P + + ++L Q V
Sbjct: 110 FSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLN 169
Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
+L P Y I ++ +V +GL+L M +V Y+VL+ +CK R
Sbjct: 170 ILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKR 229
Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
+++A L EM A L P L+TY+ LI G CK K+ ++ M + I P+
Sbjct: 230 MNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNT 289
Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
+L GL + M+ +A + + D ++I+ DGY A+ +Y ++
Sbjct: 290 LLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG 349
Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
+ + T + L+ CK GK+ A +L GL P+ V Y T ++ YC +G++
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGAR 409
Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
++ ME + + P H+ Y +I+ C+ +++ A + + M + GV+P TYN +I +
Sbjct: 410 MKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGY 469
Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
+ + K F +L +M + P +Y LI+ LC L A + +++ +S
Sbjct: 470 GRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKV 529
Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEV 613
Y +I C++G + A F +M++KG E+++ Y
Sbjct: 530 RIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYN--------------------T 569
Query: 614 MLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
++ G L +L + + GL PD F N
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYN 603
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 246 bits (629), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 143/511 (27%), Positives = 255/511 (49%), Gaps = 1/511 (0%)
Query: 75 QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
Q +L DAI + PS+V + ++S K+ ++ L M G+ + +
Sbjct: 52 QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111
Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
+Y+I I+ C + AL M + G P +T + L GF ++IS A ++ ++
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
+ G PD VT+T L+ G Q E + L E M+ +G + +++ Y +++ +CK G
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
D AL LL +ME ++ D+V Y+ +I GLCK + A L+N+M +K I P+ F + +
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE-KR 373
+ LC ++A ++ N D+V +N +ID +VK G + EA +LY ++++ K
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351
Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
P +V +N+LI GFCK +V + + + GL + VTYTT ++ + + +
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 411
Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
+ ++M + + P +TY +++ GLC ++ A+ + E M + D +TY T+I +
Sbjct: 412 MVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEAL 471
Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
CK + + L + L ++P TY ++ G C G + AD L V ++E
Sbjct: 472 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNS 531
Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
Y T+I+A +GD + +M GF
Sbjct: 532 GTYNTLIRARLRDGDEAASAELIKEMRSCGF 562
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 144/524 (27%), Positives = 261/524 (49%), Gaps = 8/524 (1%)
Query: 12 VHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
+ DA+ + M + SI ++ LL + D++ L + ++ N+YT SI
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 69 VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
I+ C++S+L A+ L + +GPS+V+LN++++ +C A L M++ G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
PD ++ L+HGL EA+ M G +PD +TY + G + A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
++ K+ + D+V Y +I G C+ ++++ L M ++G K +V Y+ L+S +
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC-SKRISPN 307
C GR +A LL +M + PDLV ++ LI K+ K+ +A +LY+EM SK P+
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
A+ ++ G C+ + + E F + + + V Y +I G+ + + A +++
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 415
Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
Q++ + P I+T+N L+ G C NG V A + + ++ ++ VTYTT + A C+ G
Sbjct: 416 QMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAG 475
Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
++ L + K + P VTYT ++ G C++ +EA L +M G P+ TYN
Sbjct: 476 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYN 535
Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY----NILIDG 527
T+IR+ + D + +L+ +M ++T+ N+L DG
Sbjct: 536 TLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDG 579
Score = 229 bits (585), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 139/510 (27%), Positives = 248/510 (48%), Gaps = 16/510 (3%)
Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
+++A+ DM + P + +S L +++ + +++ G ++ TY++
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
I +C+ + L + M+ G+ +++ + LL+ C RI EA+ L+ +M +G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
+PD VT++ L+ GL + +K +A+ L M K P+ +GA++ GLC++ A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
+ + DVV+YN +IDG K ++ +A L+ ++ K I P + T+N LI
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM-ETKAIGPT 447
C G+ +DA RLL + + P V + ++A+ +EG + L EM ++K P
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
V Y +IKG CK +++E +++ +M G+ + +TY T+I F + +D A +
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 415
Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
QM + P TYNIL+DGLC NG+++ A + +Q+ ++ L V YTT+I+A C G
Sbjct: 416 QMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAG 475
Query: 568 DVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICE 612
V FC + KG + ++ YT + F M +G P+
Sbjct: 476 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYN 535
Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
++ A + GD + EL M G D
Sbjct: 536 TLIRARLRDGDEAASAELIKEMRSCGFAGD 565
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 68/171 (39%), Gaps = 32/171 (18%)
Query: 9 TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
G V A+ V M++ D+K+ I TY ++
Sbjct: 439 NGNVETALVVFEYMQKRDMKLDIVTYTTM------------------------------- 467
Query: 69 VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
I+ LC+ +++D + K P+VV+ +MS +C+ G E A LF M + G
Sbjct: 468 -IEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526
Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
P++ +YN LI G + E +M G DA T+ ++ H
Sbjct: 527 PLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLH 577
Score = 37.4 bits (85), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 53/133 (39%)
Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
+ KL +A+ L DM P + ++ ++ + K L QM +
Sbjct: 52 QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111
Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
TY+I I+ C L A +L + + + V +++ C + +A+ QM
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 580 VEKGFEISIRDYT 592
VE G++ +T
Sbjct: 172 VEMGYQPDTVTFT 184
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 245 bits (625), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 162/586 (27%), Positives = 272/586 (46%), Gaps = 57/586 (9%)
Query: 62 NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
NVY ++I++ GLC+ A+ L+E
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLRE--------------------------------- 167
Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
M + L PD FSYN +I G C +E+ALE N+M G +T+ IL F
Sbjct: 168 --MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225
Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
++ A ++++ G + D+V YT LI G+C G ++ G L + +L +G I Y
Sbjct: 226 GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285
Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
+ L+ CK G++ EA + M G++P++ TY+ LI GLC K +A+QL N M
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIE 345
Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
K PN+ + I+ LC+ ++ +A + + D + YNI++ G G++ E
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDE 405
Query: 362 AVQLYRQLIEKR--ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
A +L +++ P ++++N+LI+G CK ++ A + D + VT
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNIL 465
Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
+N+ + G++ + + L +++ I TYT +I G CK L A LL M V +
Sbjct: 466 LNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSEL 525
Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
P YN ++ S CK L +A++L +M N P ++NI+IDG GD+K+A+
Sbjct: 526 QPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAES 585
Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM 599
LLV + +S Y+ +I G + +A++FF +MV+ GFE
Sbjct: 586 LLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFE-------------- 631
Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
PD IC+ +L G+ + EL ++ ++ DK L
Sbjct: 632 ------PDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKEL 671
Score = 239 bits (610), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 146/531 (27%), Positives = 271/531 (51%), Gaps = 15/531 (2%)
Query: 36 SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG 95
SLL +R +M D V++ + VI G C+ L+ A+ E G
Sbjct: 163 SLLREMRRNSLMPD-------------VFSYNTVIRGFCEGKELEKALELANEMKGSGCS 209
Query: 96 PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
S+V+ ++ +CK G + A G M GL D Y LI G C G ++
Sbjct: 210 WSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKAL 269
Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
+++ G P AITY+ L +GF L Q+ A ++ + ++ +G P++ TYT LI G C
Sbjct: 270 FDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCG 329
Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
+G +E L+L +M+ + + N + Y+++++ +CK G + +A+ ++ M+ +PD +T
Sbjct: 330 VGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNIT 389
Query: 276 YSILIRGLCKQDKVHKAIQLYNEMC--SKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
Y+IL+ GLC + + +A +L M S P+ ++ A++ GLC++ + +A +D
Sbjct: 390 YNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDL 449
Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
L+ D V NI+++ +K G++ +A++L++Q+ + +I + T+ ++I GFCK G
Sbjct: 450 LVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGM 509
Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
+ A+ LL +++ L+PS Y +++ C+EG++ + L +EM+ P V++ +
Sbjct: 510 LNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNI 569
Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
+I G K ++ A LL M G++PD TY+ +I F K L +A ++M
Sbjct: 570 MIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSG 629
Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
EP + + ++ G+ L+ L + +I L K T++ C
Sbjct: 630 FEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC 680
Score = 233 bits (594), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 152/548 (27%), Positives = 261/548 (47%), Gaps = 57/548 (10%)
Query: 99 VSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTND 158
VSL+ ++ Y ++ A G+ LMLK G + +++NIL+ GLC +A+ +
Sbjct: 108 VSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLRE 167
Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
M R+ + PD + +Y +I G+C+
Sbjct: 168 MRRNSLMPD-----------------------------------VFSYNTVIRGFCEGKE 192
Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
+E+ L+L M G +++ + +L+ + CK+G++DEA+G L EM+ +GL+ DLV Y+
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
LIRG C ++ + L++E+ + SP + + ++ G C+ + EA F+ +I
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
+V Y +IDG +G EA+QL +IEK P+ VT+N +I CK+G VADA
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372
Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM--ETKAIGPTHVTYTVVIK 456
+++ +K P +TY + C +G++ LL M ++ P ++Y +I
Sbjct: 373 EIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIH 432
Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
GLCK+ +L +A+ + + + D++T N ++ S K D+ KA +L Q+ +
Sbjct: 433 GLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVR 492
Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
S TY +IDG C G L A LL ++ + + Y ++ + C EG + +A F
Sbjct: 493 NSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLF 552
Query: 577 CQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
+M RD N F PD +M+ + GD+ S L M +
Sbjct: 553 EEMQ--------RD-----------NNF-PDVVSFNIMIDGSLKAGDIKSAESLLVGMSR 592
Query: 637 SGLLPDKF 644
+GL PD F
Sbjct: 593 AGLSPDLF 600
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 196/402 (48%), Gaps = 3/402 (0%)
Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
Q+ A V Q+ + GS L+ + N E ML +N ++ S
Sbjct: 53 QLKNAVSVFQQAVDSGSSLAFAGNN-LMAKLVRSRNHELAFSFYRKMLETDTFINFVSLS 111
Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
LL + + A G+L M G ++ ++IL++GLC+ + KA+ L EM
Sbjct: 112 GLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN 171
Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
+ P+ F++ ++ G CE + + +A + + S C +V + I+ID + K G + EA
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
+ +++ + +V + SLI GFC G++ + L D + G P A+TY T +
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291
Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
+C+ G ++ + + M + + P TYT +I GLC K +EA+QLL M P+
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPN 351
Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL- 541
+TYN II CK + A +++ M P + TYNIL+ GLC GDL A LL
Sbjct: 352 AVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLY 411
Query: 542 VSLQEHNISLTKV-AYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
+ L++ + + V +Y +I C E +H+A+ + +VEK
Sbjct: 412 LMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/495 (24%), Positives = 226/495 (45%), Gaps = 40/495 (8%)
Query: 5 VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVY 64
+ + G + +A+ + +MK + L+ + Y SL
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSL--------------------------- 253
Query: 65 TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
I G C L E + P ++ N ++ +CKLG + A +F M
Sbjct: 254 -----IRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFM 308
Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
++ G+ P+ ++Y LI GLC G +EAL+ N M EP+A+TY+I+ +
Sbjct: 309 IERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLV 368
Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML--SQGFKLNVIAYS 242
+ A ++++ + + + PD +TY +L+ G C G+++E KL +ML S +VI+Y+
Sbjct: 369 ADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYN 428
Query: 243 VLLSSMCKSGRIDEAL---GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
L+ +CK R+ +AL LL E G D VT +IL+ K V+KA++L+ ++
Sbjct: 429 ALIHGLCKENRLHQALDIYDLLVEKLGAG---DRVTTNILLNSTLKAGDVNKAMELWKQI 485
Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
+I NS + A++ G C+ M+ A+ + +S V YN ++ K G++
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSL 545
Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
+A +L+ ++ P +V+FN +I G K G + A LL + GL P TY+
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605
Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
+N + + G + ++ +M P V+K Q + + +L++ + +
Sbjct: 606 INRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDI 665
Query: 480 TPDQITYNTIIRSFC 494
D+ T++ C
Sbjct: 666 VLDKELTCTVMDYMC 680
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 242 bits (618), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 126/417 (30%), Positives = 220/417 (52%)
Query: 78 RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
+L DAI + PS+V N ++S KL +V L M G+ D +++N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
I+I+ C + AL M + G EPD +T L GF +++S A ++ K++
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
G PDIV Y +I C+ V + + + +G + NV+ Y+ L++ +C S R +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
LL +M + P+++TYS L+ K KV +A +L+ EM I P+ + +++ G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
LC + I EA FD ++ C+ DVV YN +I+G+ K + + ++L+R++ ++ + +
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
VT+N+LI GF + G V A+ + G+ P TY + C+ G +++ L + +
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424
Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
+M+ + + VTYT VI+G+CK K++EA L + + G+ PD +TY T++ C
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481
Score = 240 bits (612), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 136/483 (28%), Positives = 246/483 (50%), Gaps = 12/483 (2%)
Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
A LF M+K P +N L+ + + + M G+ D T++I+
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
F Q+S A ++ K+L G +PD VT L+ G+C+ V + + L + M+ G+K
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
+++AY+ ++ S+CK+ R+++A E+E G++P++VTY+ L+ GLC + A +L
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
++M K+I+PN + A+L + + EA+ F+ ++ + D+V Y+ +I+G
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
I EA Q++ ++ K +V++N+LI GFCK +V D +L + GL + VTY
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368
Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
T + + + G++ + +M+ I P TY +++ GLC +L++A+ + EDM
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428
Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
+ D +TY T+IR CK + +A+ L + L L+P TY ++ GLC G L
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE 488
Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHC--AEGDVHKAMTFFCQMVEKGFEISIRDYTKS 594
+ L TK+ ++K C ++GD+ + +M+ G+ S+ KS
Sbjct: 489 VEAL----------YTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKS 538
Query: 595 FFC 597
C
Sbjct: 539 GVC 541
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 229/465 (49%), Gaps = 7/465 (1%)
Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
+ +A++ +DM + P + ++ L L + + +K+ + G D+ T+ +
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
+I +C V L + ML G++ + + L++ C+ R+ +A+ L+ +M +G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
KPD+V Y+ +I LCK +V+ A + E+ K I PN + A++ GLC ++A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
+I +V+ Y+ ++D +VK G + EA +L+ +++ I P IVT++SLI G
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
C + ++ +A ++ D + G V+Y T +N +C+ ++ + L +EM + +
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
VTY +I+G + + +A + M G++PD TYN ++ C +L KA +
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425
Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
M ++ TY +I G+C G ++ A L SL + V YTT++ C +G
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485
Query: 569 VHKAMTFFCQMVEKGF-----EISIRDYTKS--FFCMMLSNGFPP 606
+H+ + +M ++G +S D T S MLS G+ P
Sbjct: 486 LHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAP 530
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 220/442 (49%), Gaps = 20/442 (4%)
Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
P IV + L+ ++ + + L + M G + ++ ++++++ C ++ AL +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
L +M +G +PD VT L+ G C++++V A+ L ++M P+ A+ AI+ LC+
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
+ + +A +F + +VV Y +++G +A +L +I+K+I+P+++T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
+++L+ F KNGKV +A+ L + + ++P VTY++ +N C I + M
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
+K V+Y +I G CK ++++ ++L +M G+ + +TYNT+I+ F + D+
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
KA + +QM + P TYNIL+ GLC NG+L+ A + +Q+ + L V YTT+I
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQ 620
+ C G V +A + FC + G PD M+
Sbjct: 443 RGMCKTGKVEEAWSLFCSLS--------------------LKGLKPDIVTYTTMMSGLCT 482
Query: 621 GGDLGSVFELAAVMIKSGLLPD 642
G L V L M + GL+ +
Sbjct: 483 KGLLHEVEALYTKMKQEGLMKN 504
Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 231/444 (52%), Gaps = 3/444 (0%)
Query: 12 VHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
++DA+ + + M + SI +N LL L+ D++ L ++V ++YT +I
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 69 VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
VI+ C ++ A+ L + + P V++ ++++ +C+ A L M++ G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
PD +YN +I LC + +A +F ++ R G+ P+ +TY+ L G S+ S A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
+++ ++ K P+++TY+ L+ + + G V E +L E M+ +++ YS L++ +
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
C RIDEA + M + G D+V+Y+ LI G CK +V ++L+ EM + + N+
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
+ ++ G + + +A+ +F + D+ YNI++ G G + +A+ ++
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425
Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
+ ++ + IVT+ ++I G CK GKV +A L ++ L GL+P VTYTT M+ C +G
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485
Query: 429 IQRLLALLQEMETKAIGPTHVTYT 452
+ + AL +M+ + + T +
Sbjct: 486 LHEVEALYTKMKQEGLMKNDCTLS 509
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 202/390 (51%), Gaps = 13/390 (3%)
Query: 6 YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
+ R V DAV ++ KM E+ K I YN+++ +L + + +D + +I+ N
Sbjct: 165 FCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN 224
Query: 63 VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
V T + +++GLC SR DA L + K+ P+V++ +A++ + K G AK LF
Sbjct: 225 VVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFE 284
Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
M++ + PD +Y+ LI+GLC+ ++EA + + M G D ++Y+ L GF
Sbjct: 285 EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK 344
Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
++ K+ +++ +G + VTY LI G+ Q G+V++ + M G ++ Y+
Sbjct: 345 RVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 404
Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
+LL +C +G +++AL + +M+ + D+VTY+ +IRG+CK KV +A L+ + K
Sbjct: 405 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464
Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
+ P+ + ++ GLC K ++ E + + +++ D + G+I +
Sbjct: 465 GLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN--------DCTLSDGDITLS 516
Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
+L ++++ +PS++ + G CK
Sbjct: 517 AELIKKMLSCGYAPSLL--KDIKSGVCKKA 544
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 169/363 (46%), Gaps = 26/363 (7%)
Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAIL---LGLCEKEMITEARMYFDSLIMSNCIQDVV 344
K++ AI L+++M R P+ +L + L + +++ + L + N D+
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN---DLY 121
Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
+NI+I+ + + A+ + ++++ P VT SL+ GFC+ +V+DA L+D +
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
G +P V Y +++ C+ + +E+E K I P VTYT ++ GLC +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
+A +LL DM +TP+ ITY+ ++ +F K + +A +L +M +++P TY+ L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
I+GLC++ + A+ + + V+Y T+I C V M F +M ++G
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 585 EISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
+ Y ++ F Q GD+ E + M G+ PD +
Sbjct: 362 VSNTVTYN--------------------TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW 401
Query: 645 LIN 647
N
Sbjct: 402 TYN 404
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 242 bits (617), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 175/656 (26%), Positives = 299/656 (45%), Gaps = 57/656 (8%)
Query: 8 RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDI-KVSETPRNV 63
R GMV A+ + +L + + + +L +L D++ D +D + + P V
Sbjct: 158 RYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGV 217
Query: 64 YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
+ V+D L + + A+ F + + F +VS N ++ + + EVA L L
Sbjct: 218 SAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVL-KGLSVDQIEVASRLLSL 276
Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
+L G P+ ++ LI+G C G M+ A + M + G+EPD I YS L G+
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
+ K+ + L KG D+V ++ I Y + G++ + + ML QG NV+ Y++
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
L+ +C+ GRI EA G+ ++ G++P +VTYS LI G CK + LY +M
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIGEA 362
P+ +G ++ GL ++ ++ A M F ++ I+ +VV++N +IDG+ +L EA
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHA-MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
++++R + I P + TF +++ G++ +A L + GLEP A+ Y T ++A
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDA 575
Query: 423 YCEEGNIQRLLALLQEMETKAIG-----------------------------------PT 447
+C+ L L M+ I P
Sbjct: 576 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 635
Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
VTY +I G C +L EA ++ E + V P+ +T +I CK D+ A ++ +
Sbjct: 636 IVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFS 695
Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
M +P + TY L+D + D++ + L +QE IS + V+Y+ II C G
Sbjct: 696 IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG 755
Query: 568 DVHKAMTFFCQMVEK-------GFEISIRDYTKS--------FFCMMLSNGFPPDQ 608
V +A F Q ++ + I IR Y K + ML NG PD
Sbjct: 756 RVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 811
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 195/442 (44%), Gaps = 35/442 (7%)
Query: 62 NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
NV T +I+I GLCQ R+ +A + + PS+V+ ++++ +CK G L+
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
M+K G PD Y +L+ GL G M A+ F+ M + + + ++ L G+ L
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
++ A KV + + I G PD+ T+T ++ G +EE L L M G + + +AY
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAY 569
Query: 242 SVLLSSMCKS-----------------------------------GRIDEALGLLYEMEA 266
L+ + CK RI++A +
Sbjct: 570 CTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE 629
Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
++PD+VTY+ +I G C ++ +A +++ + PN+ ++ LC+ +
Sbjct: 630 GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDG 689
Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
A F + + V Y ++D + K +I + +L+ ++ EK ISPSIV+++ +I
Sbjct: 690 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 749
Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
G CK G+V +A + L P V Y + YC+ G + L + M + P
Sbjct: 750 GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 809
Query: 447 THVTYTVVIKGLCKQWKLQEAV 468
+ + + +W + + V
Sbjct: 810 DDLLQRALSEYNPPKWLMSKGV 831
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 241 bits (615), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 168/616 (27%), Positives = 291/616 (47%), Gaps = 40/616 (6%)
Query: 27 LKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVY---TNSIVIDGLCQQSRLQDAI 83
+++ Y+SLL +L D+ + Y + E V +++ LC+ + A
Sbjct: 156 FRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAE 215
Query: 84 LFLQETAGKEFGPSVVSLNAIMSRYCK-LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHG 142
+F+ + F +++ +C+ L + K + + P++ SY+ILIHG
Sbjct: 216 MFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHG 275
Query: 143 LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
LC G +EEA + MG G +P TY++L K I A+ + +++ +G P+
Sbjct: 276 LCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPN 335
Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
+ TYTVLI G C+ G +EE + M+ +VI Y+ L++ CK GR+ A LL
Sbjct: 336 VHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLT 395
Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
ME KP++ T++ L+ GLC+ K +KA+ L M +SP
Sbjct: 396 VMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSP---------------- 439
Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
D+V YN++IDG + G++ A +L + I P +TF
Sbjct: 440 -------------------DIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFT 480
Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
++I FCK GK A L + G+ VT TT ++ C+ G + L +L+ +
Sbjct: 481 AIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKM 540
Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
I T + V++ L K K++E + +L + +G+ P +TY T++ + D+ +
Sbjct: 541 RILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGS 600
Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
F++L M L P Y I+I+GLC G ++ A+ LL ++Q+ +S V YT ++K
Sbjct: 601 FRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKG 660
Query: 563 HCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGG 622
+ G + +A+ MVE+G+E++ R Y+ +LS + E V IA +
Sbjct: 661 YVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRE-T 719
Query: 623 DLGSVFELAAVMIKSG 638
D + EL +V+ + G
Sbjct: 720 DPECINELISVVEQLG 735
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 144/581 (24%), Positives = 275/581 (47%), Gaps = 43/581 (7%)
Query: 40 NLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVV 99
NLR ++D+ +V+ P +V + SI+I GLC+ RL++A + K PS
Sbjct: 245 NLRDALKVFDVMSK-EVTCAPNSV-SYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTR 302
Query: 100 SLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
+ ++ C G + A LF M+ G P+ +Y +LI GLC G +EEA M
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
+ + P ITY+ L G+ ++ A++++ + + P++ T+ L+ G C++G
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422
Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
+ + L + ML G ++++Y+VL+ +C+ G ++ A LL M ++PD +T++ +
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAI 482
Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
I CKQ K A M K IS + ++ G+C+ +A ++L+
Sbjct: 483 INAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRI 542
Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
+ N+++D K + E + + ++ + + PS+VT+ +L+ G ++G + + R
Sbjct: 543 LTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFR 602
Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
+L+ +KL G P+ YT +N C+ G ++ LL M+ + P HVTYTV++KG
Sbjct: 603 ILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYV 662
Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
KL A++ + M G + Y+++++ F +L+Q + N E ++
Sbjct: 663 NNGKLDRALETVRAMVERGYELNDRIYSSLLQGF-----------VLSQKGIDNSEESTV 711
Query: 520 TYNIL---------------------IDGLCV--------NGDLKNADCLLVSLQEHNIS 550
+ L I GLC+ G ++ L+ ++ E +
Sbjct: 712 SDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVF 771
Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
L K A I++++C++ K M +++ GF S + +
Sbjct: 772 LEK-AMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSF 811
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 216/459 (47%), Gaps = 21/459 (4%)
Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
A+ +++ G ++ Y ++ C+ G E +L GF L+ + LL
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238
Query: 247 SMCKSGRIDEALGLLYEM-EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
C+ + +AL + M + V P+ V+YSILI GLC+ ++ +A L ++M K
Sbjct: 239 GFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ 298
Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
P++ + ++ LC++ +I +A FD +I C +V Y ++IDG + G I EA +
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
R++++ RI PS++T+N+LI G+CK+G+V A LL ++ +P+ T+ M C
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
G + + LL+ M + P V+Y V+I GLC++ + A +LL M + PD +T
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLT 478
Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
+ II +FCK A L M + T LIDG+C G ++A +L +L
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538
Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFP 605
+ I T + I+ V + + ++ + G S+ YT
Sbjct: 539 KMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYT------------- 585
Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
++ + GD+ F + +M SG LP+ +
Sbjct: 586 -------TLVDGLIRSGDITGSFRILELMKLSGCLPNVY 617
Score = 169 bits (427), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 117/371 (31%), Positives = 176/371 (47%), Gaps = 18/371 (4%)
Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL-----YEMEAVGLKPDLVTYSI 278
+LREV GF+LN YS LL S+ K +D LG L MEA G ++ Y
Sbjct: 149 ELREVF---GFRLNYPCYSSLLMSLAK---LD--LGFLAYVTYRRMEADGFVVGMIDYRT 200
Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS- 337
++ LCK A +++ +S ++LLG C + +A FD +MS
Sbjct: 201 IVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFD--VMSK 258
Query: 338 --NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
C + V Y+I+I G ++G + EA L Q+ EK PS T+ LI C G +
Sbjct: 259 EVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLID 318
Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
A L D + G +P+ TYT ++ C +G I+ + ++M I P+ +TY +I
Sbjct: 319 KAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALI 378
Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
G CK ++ A +LL M P+ T+N ++ C+ KA LL +M + L
Sbjct: 379 NGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLS 438
Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
P +YN+LIDGLC G + A LL S+ +I + +T II A C +G A F
Sbjct: 439 PDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAF 498
Query: 576 FCQMVEKGFEI 586
M+ KG +
Sbjct: 499 LGLMLRKGISL 509
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 150/347 (43%), Gaps = 30/347 (8%)
Query: 319 CEKEMIT------EARMYFDSLIMSNCIQDVVLYNIMID-GYVKLGNIGEAVQLYRQLIE 371
CEKEM+ E R F + C +++ +D G++ A YR++
Sbjct: 136 CEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFL-------AYVTYRRMEA 188
Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
++ + +++ CKNG A + I G + T+ + +C N++
Sbjct: 189 DGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRD 248
Query: 432 LLALLQEMETKAI-GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
L + M + P V+Y+++I GLC+ +L+EA L + M G P TY +I
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308
Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
++ C + KAF L ++M +P TY +LIDGLC +G ++ A+ + + + I
Sbjct: 309 KALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIF 368
Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SF 595
+ + Y +I +C +G V A M ++ + ++R + +
Sbjct: 369 PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL 428
Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
ML NG PD V++ + G + + ++L + M + PD
Sbjct: 429 LKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPD 475
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 241 bits (614), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 153/576 (26%), Positives = 281/576 (48%), Gaps = 41/576 (7%)
Query: 12 VHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
V DAV + M + SI +N LL + +++ L + ++ ++YT SI
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 69 VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
I+ C++S+L L A +AK M+K G
Sbjct: 124 FINCFCRRSQLS------------------------------LALAVLAK-----MMKLG 148
Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
PD + + L++G C + + +A+ + M G +PD T++ L G L ++ S A
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
++ +++ +G PD+VTY ++ G C+ G+++ L L M + K NV+ ++ ++ S+
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSL 268
Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
CK ++ A+ L EME G++P++VTY+ LI LC + A +L + M K+I+PN
Sbjct: 269 CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNV 328
Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
A++ ++ + EA + +I + D + YN++I+G+ + EA Q+++
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKF 388
Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
++ K P+I T+N+LI GFCK +V D L + GL + VTYTT + + + G+
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448
Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
+ ++M + + +TY++++ GLC KL A+ + + + + + YNT
Sbjct: 449 CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNT 508
Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
+I CK + +A+ L + +++P TYN +I GLC L+ AD L ++E
Sbjct: 509 MIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
Y T+I+A+ + D + +M GF
Sbjct: 566 TLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGF 601
Score = 238 bits (608), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 152/538 (28%), Positives = 252/538 (46%), Gaps = 12/538 (2%)
Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
A LF M+K P +N L+ + E + M G+ D TYSI
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
F SQ+S A V+ K++ G +PDIVT + L+ GYC + + + L + M+ G+K
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
+ ++ L+ + + EA+ L+ +M G +PDLVTY ++ GLCK+ + A+ L
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
N+M + RI N I+ LC+ + A F + +VV YN +I+
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306
Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
G +A +L ++EK+I+P++VTFN+LI F K GK+ +A +L + + ++P +TY
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITY 366
Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
+N +C + + + M +K P TY +I G CK ++++ V+L +M
Sbjct: 367 NLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ 426
Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
G+ + +TY TII+ F + D A + QM + + TY+IL+ GLC G L
Sbjct: 427 RGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDT 486
Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS--------- 587
A + LQ+ + L Y T+I+ C G V +A FC + K ++
Sbjct: 487 ALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLC 546
Query: 588 ---IRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
+ F M +G P+ ++ A + D + EL M SG + D
Sbjct: 547 SKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGD 604
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 150/559 (26%), Positives = 267/559 (47%), Gaps = 18/559 (3%)
Query: 78 RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
++ DA+ + PS+V N ++S K+ E+ L M G+ D ++Y+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
I I+ C + AL M + G EPD +T S L G+ +IS A ++ +++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
G PD T+T LI G E + L + M+ +G + +++ Y +++ +CK G ID A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
L LL +MEA +K ++V ++ +I LCK V A+ L+ EM +K I PN + +++
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
LC ++A +++ +VV +N +ID + K G + EA +L+ ++I++ I P
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
+T+N LI GFC + ++ +A+++ + P+ TY T +N +C+ ++ + L +
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
EM + + VTYT +I+G + A + + M V D +TY+ ++ C
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG 482
Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
L A + + +E YN +I+G+C G + A L SL +I V Y
Sbjct: 483 KLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYN 539
Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKG-----------FEISIRDYTKS----FFCMMLSN 602
T+I C++ + +A F +M E G ++RD ++ M S+
Sbjct: 540 TMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSS 599
Query: 603 GFPPDQEICEVMLIAFHQG 621
GF D ++ H G
Sbjct: 600 GFVGDASTISLVTNMLHDG 618
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 119/483 (24%), Positives = 234/483 (48%), Gaps = 6/483 (1%)
Query: 6 YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
+ R + A+ V+AKM +L + I T +SLL H+ + D L D + +
Sbjct: 128 FCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 187
Query: 63 VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
+T + +I GL ++ +A+ + + + P +V+ +++ CK G ++A L
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLN 247
Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
M + + +N +I LC +E A++ +M G+ P+ +TY+ L
Sbjct: 248 KMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYG 307
Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
+ S A +++ +L K +P++VT+ LI + + G + E KL E M+ + + I Y+
Sbjct: 308 RWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYN 367
Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
+L++ C R+DEA + M + P++ TY+ LI G CK +V ++L+ EM +
Sbjct: 368 LLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQR 427
Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
+ N+ + I+ G + A+M F ++ + D++ Y+I++ G G + A
Sbjct: 428 GLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTA 487
Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
+ +++ L + + +I +N++I G CK GKV +A L ++ ++P VTY T ++
Sbjct: 488 LVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISG 544
Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
C + +Q L ++M+ P TY +I+ + + +L+++M G D
Sbjct: 545 LCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGD 604
Query: 483 QIT 485
T
Sbjct: 605 AST 607
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/526 (28%), Positives = 260/526 (49%), Gaps = 9/526 (1%)
Query: 68 IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
I++ G C + A + ++ P++ + +M +C + + A L M K+
Sbjct: 191 ILVSGNCHKV----AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKH 246
Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
G P++ Y LIH L + EAL+ +M G PDA T++ + G +I+ A
Sbjct: 247 GCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEA 306
Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
K++ ++LI+G PD +TY L+ G C+IG V+ L + K ++ ++ L+
Sbjct: 307 AKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL----FYRIPKPEIVIFNTLIHG 362
Query: 248 MCKSGRIDEALGLLYEM-EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
GR+D+A +L +M + G+ PD+ TY+ LI G K+ V A+++ ++M +K P
Sbjct: 363 FVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKP 422
Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
N +++ ++ G C+ I EA + + + V +N +I + K I EAV+++
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
R++ K P + TFNSLI G C+ ++ A LL + G+ + VTY T +NA+
Sbjct: 483 REMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRR 542
Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
G I+ L+ EM + +TY +IKGLC+ ++ +A L E M G P I+
Sbjct: 543 GEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISC 602
Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
N +I C+ + +A + +M L P T+N LI+GLC G +++ + LQ
Sbjct: 603 NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQA 662
Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
I V + T++ C G V+ A + +E GF + R ++
Sbjct: 663 EGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWS 708
Score = 235 bits (600), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 139/542 (25%), Positives = 267/542 (49%), Gaps = 10/542 (1%)
Query: 6 YSRTGMVHDAVFVIAKMKEL-DLKVSIQTYNSLLYNLRHTD---IMWDLYDDIKVSETPR 61
Y + G ++ +M+ + + + ++YN +L L + + +++ D+ + P
Sbjct: 156 YDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPP 215
Query: 62 NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
++T +V+ C + + A+ L++ P+ V ++ K A L
Sbjct: 216 TLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLL 275
Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
M G PDA ++N +I GLC + EA + N M G PD ITY L G +
Sbjct: 276 EEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKI 335
Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK-LREVMLSQGFKLNVIA 240
++ A + L + P+IV + LI G+ G +++ L +++ S G +V
Sbjct: 336 GRVDAA----KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 391
Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
Y+ L+ K G + AL +L++M G KP++ +Y+IL+ G CK K+ +A + NEM
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
+ + PN+ ++ C++ I EA F + C DV +N +I G ++ I
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
A+ L R +I + + + VT+N+LI F + G++ +AR+L++ + G +TY + +
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
C G + + +L ++M P++++ ++I GLC+ ++EAV+ ++M + G T
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 631
Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
PD +T+N++I C+ + + ++ + P + T+N L+ LC G + +A CL
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA-CL 690
Query: 541 LV 542
L+
Sbjct: 691 LL 692
Score = 218 bits (556), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 127/462 (27%), Positives = 223/462 (48%), Gaps = 25/462 (5%)
Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
A V +L + P + T+ V++ +C + ++ L L M G N + Y L+
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
S+ K R++EAL LL EM +G PD T++ +I GLCK D++++A ++ N M + +P
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320
Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
+ +G ++ GLC+ + A+ F + ++V++N +I G+V G + +A +
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFYRIPKP----EIVIFNTLIHGFVTHGRLDDAKAVL 376
Query: 367 RQLIEKR-ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
++ I P + T+NSLIYG+ K G V A +L ++ G +P+ +YT ++ +C+
Sbjct: 377 SDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436
Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
G I +L EM + P V + +I CK+ ++ EAV++ +M G PD T
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
+N++I C+ +++ A LL M + + TYN LI+ G++K A L+ +
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFP 605
L ++ Y ++IK C G+V KA +S F ML +G
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKA--------------------RSLFEKMLRDGHA 596
Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
P C +++ + G + E M+ G PD N
Sbjct: 597 PSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFN 638
Score = 213 bits (542), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 215/434 (49%), Gaps = 40/434 (9%)
Query: 69 VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
VI GLC+ R+ +A + + F P ++ +M+ CK+G + AK LF + K
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK-- 350
Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDM-GRHGVEPDAITYSILAKGFHLLSQISGA 187
P+ +N LIHG G +++A +DM +G+ PD TY+ L G+ + A
Sbjct: 351 --PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
+V+ + KG P++ +YT+L+ G+C++G ++E + M + G K N + ++ L+S+
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
CK RI EA+ + EM G KPD+ T++ LI GLC+ D++ A+ L +M S+ + N
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528
Query: 308 S-----------------------------------FAHGAILLGLCEKEMITEARMYFD 332
+ + +++ GLC + +AR F+
Sbjct: 529 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 588
Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
++ + NI+I+G + G + EAV+ ++++ + +P IVTFNSLI G C+ G
Sbjct: 589 KMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG 648
Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
++ D + ++ G+ P VT+ T M+ C+ G + LL E P H T++
Sbjct: 649 RIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWS 708
Query: 453 VVIKGLCKQWKLQE 466
++++ + Q L
Sbjct: 709 ILLQSIIPQETLDR 722
Score = 192 bits (489), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 193/374 (51%), Gaps = 4/374 (1%)
Query: 60 PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG--PSVVSLNAIMSRYCKLGFAEVA 117
P V N++ I G RL DA L + +G P V + N+++ Y K G +A
Sbjct: 351 PEIVIFNTL-IHGFVTHGRLDDAKAVLSDMV-TSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
+ M G P+ +SY IL+ G C G ++EA N+M G++P+ + ++ L
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
F +I A ++ +++ KG PD+ T+ LI G C++ ++ L L M+S+G N
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528
Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
+ Y+ L+++ + G I EA L+ EM G D +TY+ LI+GLC+ +V KA L+
Sbjct: 529 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 588
Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
+M +P++ + ++ GLC M+ EA + +++ D+V +N +I+G + G
Sbjct: 589 KMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG 648
Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
I + + ++R+L + I P VTFN+L+ CK G V DA LLD G P+ T++
Sbjct: 649 RIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWS 708
Query: 418 TFMNAYCEEGNIQR 431
+ + + + R
Sbjct: 709 ILLQSIIPQETLDR 722
Score = 149 bits (375), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 171/360 (47%), Gaps = 39/360 (10%)
Query: 10 GMVHDAVFVIAKM-KELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVYT 65
G + DA V++ M + + TYNSL+Y ++ ++ D++ NVY+
Sbjct: 367 GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYS 426
Query: 66 NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
+I++DG C+ ++ +A L E + P+ V N ++S +CK A +F M
Sbjct: 427 YTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMP 486
Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
+ G PD +++N LI GLC ++ AL DM GV + +TY+ L F +I
Sbjct: 487 RKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK 546
Query: 186 GAWKVIQKLLIKGSDPDIVTYT-----------------------------------VLI 210
A K++ +++ +GS D +TY +LI
Sbjct: 547 EARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILI 606
Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
G C+ G VEE ++ ++ M+ +G +++ ++ L++ +C++GRI++ L + +++A G+
Sbjct: 607 NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIP 666
Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
PD VT++ L+ LCK V+ A L +E PN +L + +E + R Y
Sbjct: 667 PDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRRFY 726
Score = 36.2 bits (82), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 56/138 (40%), Gaps = 16/138 (11%)
Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA---EGDVHKAM---- 573
Y +LI L NG+ K D LL+ +++ I + + +I++ + G + M
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMR 173
Query: 574 -TFFCQMVEKGFEISIR--------DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDL 624
+ C+ K + + + + F MLS PP V++ AF ++
Sbjct: 174 NVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEI 233
Query: 625 GSVFELAAVMIKSGLLPD 642
S L M K G +P+
Sbjct: 234 DSALSLLRDMTKHGCVPN 251
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/237 (17%), Positives = 89/237 (37%), Gaps = 21/237 (8%)
Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
+G S Y + G + + LL +M+ + I + +++ K +
Sbjct: 105 NGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQ 164
Query: 467 AVQLLEDMY-VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
+L+ +M V P +YN ++ + A + M + PT T+ +++
Sbjct: 165 TTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVM 224
Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
C ++ +A LL + +H V Y T+I + V++A+ Q++E+ F
Sbjct: 225 KAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL----QLLEEMFL 280
Query: 586 ISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
+ G PD E +++ + + ++ M+ G PD
Sbjct: 281 M----------------GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPD 321
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 236/454 (51%), Gaps = 1/454 (0%)
Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
+ H C +G+ E+L M R G PD I + L KGF L I A +V++ +L K
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME-ILEKF 153
Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
PD+ Y LI G+C++ +++ ++ + M S+ F + + Y++++ S+C G++D AL
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
+L ++ + +P ++TY+ILI + V +A++L +EM S+ + P+ F + I+ G+
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
C++ M+ A +L + C DV+ YNI++ + G E +L ++ ++ P++
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
VT++ LI C++GK+ +A LL +K GL P A +Y + A+C EG + + L+
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
M + P V Y V+ LCK K +A+++ + +G +P+ +YNT+ + D
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 453
Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
+A ++ +M + ++P TYN +I LC G + A LLV ++ + V Y
Sbjct: 454 KIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNI 513
Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
++ C + A+ MV G + YT
Sbjct: 514 VLLGFCKAHRIEDAINVLESMVGNGCRPNETTYT 547
Score = 236 bits (601), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 131/459 (28%), Positives = 225/459 (49%), Gaps = 1/459 (0%)
Query: 74 CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDA 133
C+ +++ L+ K + P V+ ++ + L A + ++ K+G PD
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
F+YN LI+G C +++A + M PD +TY+I+ ++ A KV+ +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
LL P ++TYT+LI G V+E LKL + MLS+G K ++ Y+ ++ MCK G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
+D A ++ +E G +PD+++Y+IL+R L Q K + +L +M S++ PN +
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
++ LC I EA + D Y+ +I + + G + A++ +I
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
P IV +N+++ CKNGK A + + G P++ +Y T +A G+ R L
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
++ EM + I P +TY +I LC++ + EA +LL DM P +TYN ++ F
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518
Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
CK + A +L M + P TY +LI+G+ G
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG 557
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/446 (28%), Positives = 222/446 (49%), Gaps = 11/446 (2%)
Query: 62 NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
+V+ + +I+G C+ +R+ DA L K+F P V+ N ++ C G ++A +
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
+L P +Y ILI + G ++EAL+ ++M G++PD TY+ + +G
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
+ A+++++ L +KG +PD+++Y +L+ G EEG KL M S+ NV+ Y
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336
Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
S+L++++C+ G+I+EA+ LL M+ GL PD +Y LI C++ ++ AI+ M S
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
P+ + +L LC+ +A F L C + YN M G+
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456
Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
A+ + +++ I P +T+NS+I C+ G V +A LL ++ PS VTY +
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516
Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
+C+ I+ + +L+ M P TYTV+I+G+ EA++L D+ I
Sbjct: 517 GFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI---- 572
Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLN 507
D I+ + R L + F LLN
Sbjct: 573 DAISEYSFKR-------LHRTFPLLN 591
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 226/419 (53%), Gaps = 1/419 (0%)
Query: 92 KEFG-PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
++FG P V + NA+++ +CK+ + A + M PD +YNI+I LC G ++
Sbjct: 151 EKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLD 210
Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
AL+ N + +P ITY+IL + L + A K++ ++L +G PD+ TY +I
Sbjct: 211 LALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
G C+ G V+ ++ + +G + +VI+Y++LL ++ G+ +E L+ +M +
Sbjct: 271 RGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD 330
Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
P++VTYSILI LC+ K+ +A+ L M K ++P+++++ ++ C + + A +
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
+++I C+ D+V YN ++ K G +A++++ +L E SP+ ++N++
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
+G A ++ + +G++P +TY + ++ C EG + LL +M + P+ VT
Sbjct: 451 SGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVT 510
Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
Y +V+ G CK ++++A+ +LE M G P++ TY +I +A +L N +
Sbjct: 511 YNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 192 bits (489), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 214/445 (48%), Gaps = 16/445 (3%)
Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
C+ GN E L L E M+ +G+ +VI + L+ I +A+ ++ +E G +PD+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
Y+ LI G CK +++ A ++ + M SK SP++ + ++ LC + + A +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
L+ NC V+ Y I+I+ + G + EA++L +++ + + P + T+N++I G CK G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
V A ++ ++L G EP ++Y + A +G + L+ +M ++ P VTY++
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
+I LC+ K++EA+ LL+ M G+TPD +Y+ +I +FC+ L A + L M
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
P YN ++ LC NG A + L E S +Y T+ A + GD +A+
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 574 TFFCQMVEKGFEISIRDYTKSFFCM---------------MLSNGFPPDQEICEVMLIAF 618
+M+ G + Y C+ M S F P ++L+ F
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518
Query: 619 HQGGDLGSVFELAAVMIKSGLLPDK 643
+ + + M+ +G P++
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNE 543
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 184/414 (44%), Gaps = 51/414 (12%)
Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
C+SG E+L LL M G PD++ + LI+G + KA+++ E+ K P+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158
Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
FA YN +I+G+ K+ I +A ++ +
Sbjct: 159 FA-----------------------------------YNALINGFCKMNRIDDATRVLDR 183
Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
+ K SP VT+N +I C GK+ A ++L+ + +P+ +TYT + A EG
Sbjct: 184 MRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGG 243
Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
+ L L+ EM ++ + P TY +I+G+CK+ + A +++ ++ + G PD I+YN
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNI 303
Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
++R+ + +L+ +M+ +P TY+ILI LC +G ++ A LL ++E
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--------------- 593
++ +Y +I A C EG + A+ F M+ G I +Y
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423
Query: 594 SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
F + G P+ M A GD + M+ +G+ PD+ N
Sbjct: 424 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477
Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 153/312 (49%), Gaps = 3/312 (0%)
Query: 10 GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
G V +A+ ++ +M LK + TYN+++ + D +++ ++++ +V +
Sbjct: 242 GGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISY 301
Query: 67 SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
+I++ L Q + ++ + + ++ P+VV+ + +++ C+ G E A L LM +
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE 361
Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
GL PDA+SY+ LI C G ++ A+EF M G PD + Y+ + +
Sbjct: 362 KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQ 421
Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
A ++ KL G P+ +Y + G+ L + M+S G + I Y+ ++S
Sbjct: 422 ALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMIS 481
Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
+C+ G +DEA LL +M + P +VTY+I++ G CK ++ AI + M P
Sbjct: 482 CLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRP 541
Query: 307 NSFAHGAILLGL 318
N + ++ G+
Sbjct: 542 NETTYTVLIEGI 553
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 76/190 (40%), Gaps = 34/190 (17%)
Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI------------ 484
++ ++++G + C+ E++ LLE M G PD I
Sbjct: 78 RQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTL 137
Query: 485 ----------------------TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
YN +I FCK + A ++L++M + P + TYN
Sbjct: 138 RNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYN 197
Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
I+I LC G L A +L L N T + YT +I+A EG V +A+ +M+ +
Sbjct: 198 IMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR 257
Query: 583 GFEISIRDYT 592
G + + Y
Sbjct: 258 GLKPDMFTYN 267
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 238 bits (608), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 156/595 (26%), Positives = 262/595 (44%), Gaps = 73/595 (12%)
Query: 64 YTNSIVIDGLCQQSRLQDAILFLQE--------------------------TAGKEFGPS 97
YT ++IDGLC+ RL+DA L E A K
Sbjct: 278 YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHE 337
Query: 98 VVSLNAIMSRY---------CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGS 148
+VS + Y K G E AK LF M+ GL P A +Y LI G C +
Sbjct: 338 MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397
Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
+ + E +M + + TY + KG + GA+ ++++++ G P++V YT
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 457
Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
LI + Q + +++ + M QG ++ Y+ L+ + K+ R+DEA L EM G
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
LKP+ TY I G + + A + EM + PN ++ C+K + EA
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 577
Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
+ S++ + D Y ++++G K + +A +++R++ K I+P + ++ LI GF
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 637
Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
K G + A + D + GL P+ + Y + +C G I++ LL EM K + P
Sbjct: 638 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697
Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF----- 503
VTY +I G CK L EA +L ++M + G+ PD Y T++ C+ D+ +A
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT 757
Query: 504 -----------------------------QLLNQMWLHNLE----PTSATYNILIDGLCV 530
++LN++ + + P TYNI+ID LC
Sbjct: 758 NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817
Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
G+L+ A L +Q N+ T + YT+++ + G + F + + G E
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872
Score = 231 bits (590), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 160/611 (26%), Positives = 279/611 (45%), Gaps = 56/611 (9%)
Query: 6 YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
Y G + +AVFV + L+L + LL L D+ WD+Y + +
Sbjct: 161 YIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFD 220
Query: 63 VYTNSIVIDGLCQQSRLQ--DAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
V T ++I C+ +Q +LF E KEF + ++++ G ++ + +
Sbjct: 221 VKTYHMLIIAHCRAGNVQLGKDVLFKTE---KEFRTATLNVD---------GALKLKESM 268
Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
C GL P ++Y++LI GLC +E+A +M GV D TYS+L G
Sbjct: 269 IC----KGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK 324
Query: 181 LSQISGAWKVIQKLLIKGSD-----------------------------------PDIVT 205
A ++ +++ G + P
Sbjct: 325 GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQA 384
Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
Y LI GYC+ NV +G +L M + ++ Y ++ MC SG +D A ++ EM
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444
Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
A G +P++V Y+ LI+ + + A+++ EM + I+P+ F + ++++GL + + +
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504
Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
EAR + ++ + + Y I GY++ A + +++ E + P+ V LI
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564
Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
+CK GKV +A ++ G+ A TYT MN + + + +EM K I
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA 624
Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
P +Y V+I G K +Q+A + ++M G+TP+ I YN ++ FC+ ++ KA +L
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
L++M + L P + TY +IDG C +GDL A L ++ + YTT++ C
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Query: 566 EGDVHKAMTFF 576
DV +A+T F
Sbjct: 745 LNDVERAITIF 755
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 144/577 (24%), Positives = 262/577 (45%), Gaps = 48/577 (8%)
Query: 6 YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRN 62
Y R V ++ +MK+ ++ +S TY +++ + + D +++ ++ S N
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 63 VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
V + +I Q SR DA+ L+E + P + N+++ K + A+
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511
Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP---------------- 166
M++ GL P+AF+Y I G A A ++ +M GV P
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571
Query: 167 -------------------DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
DA TY++L G ++ A ++ +++ KG PD+ +Y
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631
Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
VLI G+ ++GN+++ + + M+ +G NVI Y++LL C+SG I++A LL EM
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691
Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
GL P+ VTY +I G CK + +A +L++EM K + P+SF + ++ G C + A
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS----PSIVTFNS 383
F + C +N +I+ K G ++ +L++ P+ VT+N
Sbjct: 752 ITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
+I CK G + A+ L ++ L P+ +TYT+ +N Y + G + + E
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAG 870
Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI-----TYNTIIRSFCKCKD 498
I P H+ Y+V+I K+ +A+ L++ M+ D T ++ F K +
Sbjct: 871 IEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGE 930
Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
+ A +++ M P SAT LI+ C++ + +
Sbjct: 931 MEVAEKVMENMVRLQYIPDSATVIELINESCISSNQR 967
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 143/577 (24%), Positives = 257/577 (44%), Gaps = 18/577 (3%)
Query: 69 VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
+I+G C++ ++ L E + S + ++ C G + A + M+ G
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
P+ Y LI +A+ +M G+ PD Y+ L G ++ A
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507
Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
+ +++ G P+ TY I GY + K + M G N + + L++
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY 567
Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
CK G++ EA M G+ D TY++L+ GL K DKV A +++ EM K I+P+
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
F++G ++ G + + +A FD ++ +V++YN+++ G+ + G I +A +L +
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
+ K + P+ VT+ ++I G+CK+G +A+A RL D +KL GL P + YTT ++ C +
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 429 IQRLLALLQEME---TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
++R + + + + P + V K + K + +L++ + P+ +T
Sbjct: 748 VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807
Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
YN +I CK +L A +L +QM NL PT TY L++G G +
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867
Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFP 605
I + Y+ II A EG KA+ QM K + +G
Sbjct: 868 AAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKN---------------AVDDGCK 912
Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
C +L F + G++ ++ M++ +PD
Sbjct: 913 LSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPD 949
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 155/593 (26%), Positives = 269/593 (45%), Gaps = 96/593 (16%)
Query: 68 IVIDGLCQQSRLQDAILFLQETAGKEFGPSV----VSLNAIMSRYCKLG-FAEVAKGLFC 122
I+ DG + +++A+ + G E P + V L+A++ R+ +L F +V KG
Sbjct: 156 ILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALL-RWNRLDLFWDVYKG--- 211
Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
M++ + D +Y++LI C AG+++ +G+ D + + K F +
Sbjct: 212 -MVERNVVFDVKTYHMLIIAHCRAGNVQ--------LGK-----DVLFKT--EKEFRTAT 255
Query: 183 -QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
+ GA K+ + ++ KG P TY VLI G C+I +E+ L M S G L+ Y
Sbjct: 256 LNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTY 315
Query: 242 SVLLSSMCKSGRIDEALGLLYEME-----------------------------------A 266
S+L+ + K D A GL++EM A
Sbjct: 316 SLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIA 375
Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
GL P Y+ LI G C++ V + +L EM + I + + +G ++ G+C +
Sbjct: 376 SGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDG 435
Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
A +I S C +VV+Y +I +++ G+A+++ +++ E+ I+P I +NSLI
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF--------------------------- 419
G K ++ +AR L + +GL+P+A TY F
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555
Query: 420 --------MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
+N YC++G + + + M + I TYTV++ GL K K+ +A ++
Sbjct: 556 NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIF 615
Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
+M G+ PD +Y +I F K +++KA + ++M L P YN+L+ G C +
Sbjct: 616 REMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRS 675
Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
G+++ A LL + + V Y TII +C GD+ +A F +M KG
Sbjct: 676 GEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 136/587 (23%), Positives = 238/587 (40%), Gaps = 89/587 (15%)
Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
D+FS+ L LC GS E+AL ++ ++ + + + S +
Sbjct: 98 DSFSF--LALDLCNFGSFEKAL--------------SVVERMIERNWPVAEVWSSIVRCS 141
Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEE---------GLKL----------------- 225
Q+ + G D V + +L GY G +EE GL+L
Sbjct: 142 QEFV--GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRW 199
Query: 226 ---------REVMLSQGFKLNVIAYSVLLSSMCKSG---------------------RID 255
+ M+ + +V Y +L+ + C++G +D
Sbjct: 200 NRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVD 259
Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
AL L M GL P TY +LI GLCK ++ A L EM S +S ++ + ++
Sbjct: 260 GALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLI 319
Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
GL + A+ ++ +Y+ I K G + +A L+ +I +
Sbjct: 320 DGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLI 379
Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
P + SLI G+C+ V LL +K + S TY T + C G++ +
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439
Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
++EM P V YT +IK + + +A+++L++M G+ PD YN++I K
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
K + +A L +M + L+P + TY I G + +AD + ++E + KV
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559
Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMML 600
T +I +C +G V +A + + MV++G + YT + F M
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619
Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
G PD V++ F + G++ + M++ GL P+ + N
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYN 666
Score = 102 bits (254), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 110/530 (20%), Positives = 201/530 (37%), Gaps = 128/530 (24%)
Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG----LKPDLVTYSILIR 281
R+ ++S + + VL S+ +S R+D+ LL V + L ++S L
Sbjct: 48 RDTLVSSNLSIEINPEVVL--SVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLAL 105
Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
LC KA+ + M +R P + +I+ C +E + ++
Sbjct: 106 DLCNFGSFEKALSVVERMI-ERNWPVAEVWSSIVR--CSQEFVGKS-------------D 149
Query: 342 DVVLYNIMIDGYVKLGNIGEAV-----------------------------------QLY 366
D VL+ I+ DGY+ G I EAV +Y
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209
Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVA---------------------DARRLLDTIK 405
+ ++E+ + + T++ LI C+ G V A +L +++
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMI 269
Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL------- 458
GL P TY ++ C+ ++ +LL EM++ + + TY+++I GL
Sbjct: 270 CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNAD 329
Query: 459 ----------------------------CKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
K+ +++A L + M G+ P Y ++I
Sbjct: 330 AAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389
Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
+C+ K++R+ ++LL +M N+ + TY ++ G+C +GDL A ++ +
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR 449
Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI---------------RDYTKSF 595
V YTT+IK AM +M E+G I D +SF
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509
Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
M+ NG P+ + + + + S + M + G+LP+K L
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559
Score = 82.8 bits (203), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 139/297 (46%), Gaps = 15/297 (5%)
Query: 1 MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIM--WDLYDDIKVS 57
ML + R+G + A ++ +M L + TY +++ + D+ + L+D++K+
Sbjct: 667 MLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726
Query: 58 ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
+ + + ++DG C+ + ++ AI T K S NA+++ K G E+
Sbjct: 727 GLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELK 785
Query: 118 KGLFCLML-----KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
+ ++ ++G P+ +YNI+I LC G++E A E + M + P ITY+
Sbjct: 786 TEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844
Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
L G+ + + + + V + + G +PD + Y+V+I + + G + L L + M ++
Sbjct: 845 SLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904
Query: 233 -----GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
G KL++ LLS K G ++ A ++ M + PD T LI C
Sbjct: 905 NAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 238 bits (606), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 139/454 (30%), Positives = 236/454 (51%), Gaps = 3/454 (0%)
Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
C+L + A F LM + G +P + N ++ L +E A F DM R ++ +
Sbjct: 166 CQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNV 225
Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
T++I+ ++ A + + + G P IVTY L+ G+ G +E +
Sbjct: 226 YTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISE 285
Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
M S+GF+ ++ Y+ +LS MC GR E +L EM+ +GL PD V+Y+ILIRG
Sbjct: 286 MKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILIRGCSNNGD 342
Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
+ A +EM + + P + + ++ GL + I A + + + D V YNI
Sbjct: 343 LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 402
Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
+I+GY + G+ +A L+ +++ I P+ T+ SLIY C+ K +A L + + G
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG 462
Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
++P V T M+ +C GN+ R +LL+EM+ +I P VTY +++GLC + K +EA
Sbjct: 463 MKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEAR 522
Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
+L+ +M G+ PD I+YNT+I + K D + AF + ++M PT TYN L+ GL
Sbjct: 523 ELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGL 582
Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
N + + A+ LL ++ I ++ ++I+A
Sbjct: 583 SKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/420 (28%), Positives = 220/420 (52%), Gaps = 3/420 (0%)
Query: 73 LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
L + +R+++A +F + E +V + N +++ CK G + AKG +M +G+ P
Sbjct: 200 LSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPT 259
Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
+YN L+ G + G +E A ++M G +PD TY+ + + A +V++
Sbjct: 260 IVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPI---LSWMCNEGRASEVLR 316
Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
++ G PD V+Y +LI G G++E R+ M+ QG Y+ L+ +
Sbjct: 317 EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMEN 376
Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
+I+ A L+ E+ G+ D VTY+ILI G C+ KA L++EM + I P F +
Sbjct: 377 KIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYT 436
Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
+++ LC K EA F+ ++ D+V+ N ++DG+ +GN+ A L +++
Sbjct: 437 SLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMM 496
Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
I+P VT+N L+ G C GK +AR L+ +K G++P ++Y T ++ Y ++G+ +
Sbjct: 497 SINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHA 556
Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
+ EM + PT +TY ++KGL K + + A +LL +M G+ P+ ++ ++I +
Sbjct: 557 FMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 216/446 (48%), Gaps = 23/446 (5%)
Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
KG P T ++ ++ +E M K NV ++++++ +CK G++ +
Sbjct: 184 KGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKK 243
Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
A G L ME G+KP +VTY+ L++G + ++ A + +EM SK P+ + IL
Sbjct: 244 AKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILS 303
Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
+C + +E + + D V YNI+I G G++ A +++++ + P
Sbjct: 304 WMCNEGRASEVLREMKEI---GLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVP 360
Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
+ T+N+LI+G K+ A L+ I+ G+ +VTY +N YC+ G+ ++ AL
Sbjct: 361 TFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALH 420
Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
EM T I PT TYT +I LC++ K +EA +L E + G+ PD + NT++ C
Sbjct: 421 DEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAI 480
Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
++ +AF LL +M + ++ P TYN L+ GLC G + A L+ ++ I ++Y
Sbjct: 481 GNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISY 540
Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLI 616
T+I + +GD A +M+ GF ++ Y L G +QE
Sbjct: 541 NTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNA------LLKGLSKNQE------- 587
Query: 617 AFHQGGDLGSVFELAAVMIKSGLLPD 642
G+L EL M G++P+
Sbjct: 588 -----GELAE--ELLREMKSEGIVPN 606
Score = 189 bits (479), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 130/451 (28%), Positives = 212/451 (47%), Gaps = 43/451 (9%)
Query: 11 MVHDAVFVIAKMKELDLKVSIQTYN---SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
MV +A+ MKE +T N +LL L + W Y D+ E NVYT +
Sbjct: 170 MVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFN 229
Query: 68 IVIDGLCQQSRLQDAILFL-----------------------------------QETAGK 92
I+I+ LC++ +L+ A FL E K
Sbjct: 230 IMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSK 289
Query: 93 EFGPSVVSLNAIMSRYCKLGFA-EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
F P + + N I+S C G A EV + M + GL PD+ SYNILI G G +E
Sbjct: 290 GFQPDMQTYNPILSWMCNEGRASEVLRE----MKEIGLVPDSVSYNILIRGCSNNGDLEM 345
Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
A + ++M + G+ P TY+ L G + ++I A +I+++ KG D VTY +LI
Sbjct: 346 AFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILIN 405
Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
GYCQ G+ ++ L + M++ G + Y+ L+ +C+ + EA L ++ G+KP
Sbjct: 406 GYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKP 465
Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
DLV + L+ G C + +A L EM I+P+ + ++ GLC + EAR
Sbjct: 466 DLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELM 525
Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
+ D + YN +I GY K G+ A + +++ +P+++T+N+L+ G KN
Sbjct: 526 GEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKN 585
Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
+ A LL +K G+ P+ ++ + + A
Sbjct: 586 QEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 193/438 (44%), Gaps = 23/438 (5%)
Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
+ + +L+ CQ+ V+E ++ +M +GF + +L+ + + RI+ A +
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215
Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
M + +K ++ T++I+I LCK+ K+ KA M I P + ++ G +
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
I AR+ + D+ YN ++ + N G A ++ R++ E + P V++N
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTYNPILSW---MCNEGRASEVLREMKEIGLVPDSVSYNI 332
Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
LI G NG + A D + G+ P+ TY T ++ E I+ L++E+ K
Sbjct: 333 LIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG 392
Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
I VTY ++I G C+ ++A L ++M G+ P Q TY ++I C+ R+A
Sbjct: 393 IVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREAD 452
Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
+L ++ ++P N L+DG C G++ A LL + +I+ V Y +++
Sbjct: 453 ELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGL 512
Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
C EG +A +M +G PD ++ + + GD
Sbjct: 513 CGEGKFEEARELMGEMKRRGI--------------------KPDHISYNTLISGYSKKGD 552
Query: 624 LGSVFELAAVMIKSGLLP 641
F + M+ G P
Sbjct: 553 TKHAFMVRDEMLSLGFNP 570
Score = 135 bits (340), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 139/308 (45%), Gaps = 18/308 (5%)
Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
+L I A Y + I ++ TFN +I CK GK+ A+ L +++ G++P+ V
Sbjct: 202 RLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIV 261
Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
TY T + + G I+ ++ EM++K P TY ++ +C + + A ++L +M
Sbjct: 262 TYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREM 318
Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
IG+ PD ++YN +IR DL AF ++M + PT TYN LI GL + +
Sbjct: 319 KEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKI 378
Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK- 593
+ A+ L+ ++E I L V Y +I +C GD KA +M+ G + + YT
Sbjct: 379 EAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSL 438
Query: 594 --------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
F ++ G PD + ++ G++ F L M +
Sbjct: 439 IYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSI 498
Query: 640 LPDKFLIN 647
PD N
Sbjct: 499 NPDDVTYN 506
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 122/258 (47%), Gaps = 3/258 (1%)
Query: 33 TYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
TYN+L++ L + L +I+ + T +I+I+G CQ + A E
Sbjct: 364 TYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEM 423
Query: 90 AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
P+ + +++ C+ A LF ++ G+ PD N L+ G C G+M
Sbjct: 424 MTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNM 483
Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
+ A +M + PD +TY+ L +G + A +++ ++ +G PD ++Y L
Sbjct: 484 DRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTL 543
Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
I GY + G+ + +R+ MLS GF ++ Y+ LL + K+ + A LL EM++ G+
Sbjct: 544 ISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGI 603
Query: 270 KPDLVTYSILIRGLCKQD 287
P+ ++ +I + D
Sbjct: 604 VPNDSSFCSVIEAMSNLD 621
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 82/209 (39%), Gaps = 23/209 (11%)
Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
M+ K P T ++ L + +++ A DMY + + + T+N +I CK
Sbjct: 181 MKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 240
Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
L+KA L M + ++PT TYN L+ G + G ++ A ++ ++ Y
Sbjct: 241 LKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNP 300
Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAF 618
I+ C EG +A +M E G PD +++
Sbjct: 301 ILSWMCNEG---RASEVLREMKEI--------------------GLVPDSVSYNILIRGC 337
Query: 619 HQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
GDL F M+K G++P + N
Sbjct: 338 SNNGDLEMAFAYRDEMVKQGMVPTFYTYN 366
Score = 33.9 bits (76), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 64/183 (34%), Gaps = 18/183 (9%)
Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
T I ++ ++R C+ + + +A + M P + T N ++ L ++NA
Sbjct: 152 TKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWV 211
Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT------- 592
+ I + +I C EG + KA F M G + +I Y
Sbjct: 212 FYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFS 271
Query: 593 --------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
+ M S GF PD + +L G V M + GL+PD
Sbjct: 272 LRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLR---EMKEIGLVPDSV 328
Query: 645 LIN 647
N
Sbjct: 329 SYN 331
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 234 bits (597), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 136/457 (29%), Positives = 239/457 (52%)
Query: 79 LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
L DAI A PS++ + ++S K+ ++ M G+ + ++YNI
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
LI+ C + AL M + G EPD +T + L GF ++IS A ++ +++ G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
PD VT+T LI G E + L + M+ +G + +++ Y +++ +CK G D AL
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
LL +MEA ++ ++V YS +I LCK A+ L+ EM +K + PN + +++ L
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
C ++A +I ++V ++ +ID +VK G + +A +LY ++I++ I P+I
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358
Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
T++SLI GFC ++ +A+++L+ + P+ VTY T +N +C+ + + + L +E
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFRE 418
Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
M + + VTYT +I G + A + + M +GV P+ +TYN ++ CK
Sbjct: 419 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 478
Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
L KA + + +EP TYNI+I+G+C G K
Sbjct: 479 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 247/466 (53%), Gaps = 9/466 (1%)
Query: 8 RTGM----VHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETP 60
RTG+ + DA+ + M + SI ++ LL + D++ + +++
Sbjct: 51 RTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGIS 110
Query: 61 RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
N+YT +I+I+ C+ SRL A+ L + + P +V+LN++++ +C A L
Sbjct: 111 HNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVAL 170
Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
M++ G PD ++ LIHGL + EA+ + M + G +PD +TY + G
Sbjct: 171 VDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCK 230
Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
A ++ K+ + ++V Y+ +I C+ + ++ L L M ++G + NVI
Sbjct: 231 RGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT 290
Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
YS L+S +C GR +A LL +M + P+LVT+S LI K+ K+ KA +LY EM
Sbjct: 291 YSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMI 350
Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
+ I PN F + +++ G C + + EA+ + +I +C+ +VV YN +I+G+ K +
Sbjct: 351 KRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVD 410
Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
+ ++L+R++ ++ + + VT+ +LI+GF + +A+ + + G+ P+ +TY +
Sbjct: 411 KGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 470
Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK--QWKL 464
+ C+ G + + + + + ++ + P TY ++I+G+CK +WK+
Sbjct: 471 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKM 516
Score = 212 bits (539), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 226/460 (49%)
Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
A GLF +M + P ++ L+ + + + F M G+ + TY+IL
Sbjct: 62 AIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILIN 121
Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
F S++S A ++ K++ G +PDIVT L+ G+C + + + L + M+ G+K
Sbjct: 122 CFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKP 181
Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
+ + ++ L+ + + EA+ L+ M G +PDLVTY ++ GLCK+ A+ L
Sbjct: 182 DTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLL 241
Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
N+M + +I N + ++ LC+ +A F + +V+ Y+ +I
Sbjct: 242 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 301
Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
G +A +L +IE++I+P++VTF++LI F K GK+ A +L + + ++P+ TY
Sbjct: 302 GRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTY 361
Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
++ +N +C + +L+ M K P VTY +I G CK ++ + ++L +M
Sbjct: 362 SSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQ 421
Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
G+ + +TY T+I F + +D A + QM + P TYNIL+DGLC NG L
Sbjct: 422 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 481
Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
A + LQ + Y +I+ C G +F
Sbjct: 482 AMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYF 521
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 200/426 (46%), Gaps = 15/426 (3%)
Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
++I +S LLS++ K + D + +ME +G+ +L TY+ILI C+ ++ A+ L
Sbjct: 77 SIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALL 136
Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
+M P+ ++L G C I++A D ++ D V + +I G
Sbjct: 137 GKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLH 196
Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
EAV L +++++ P +VT+ +++ G CK G A LL+ ++ +E + V Y
Sbjct: 197 NKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIY 256
Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
+T +++ C+ + L L EME K + P +TY+ +I LC + +A +LL DM
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE 316
Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
+ P+ +T++ +I +F K L KA +L +M +++P TY+ LI+G C+ L
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG------------- 583
A +L + + V Y T+I C V K M F +M ++G
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436
Query: 584 --FEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
F+ D + F M+S G P+ ++L + G L + + +S + P
Sbjct: 437 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 496
Query: 642 DKFLIN 647
D + N
Sbjct: 497 DIYTYN 502
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 171/321 (53%), Gaps = 3/321 (0%)
Query: 14 DAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVI 70
+AV +I +M + + + TY +++ L TD+ +L + ++ ++ NV S VI
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 71 DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
D LC+ DA+ E K P+V++ ++++S C G A L M++ ++
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320
Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
P+ +++ LI G + +A + +M + ++P+ TYS L GF +L ++ A ++
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQM 380
Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
++ ++ K P++VTY LI G+C+ V++G++L M +G N + Y+ L+ +
Sbjct: 381 LELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQ 440
Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
+ D A + +M +VG+ P+++TY+IL+ GLCK K+ KA+ ++ + + P+ +
Sbjct: 441 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 500
Query: 311 HGAILLGLCEKEMITEARMYF 331
+ ++ G+C+ +YF
Sbjct: 501 YNIMIEGMCKAGKWKMGGIYF 521
Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 157/348 (45%), Gaps = 37/348 (10%)
Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
+D+A+GL M P ++ +S L+ + K +K I SF
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVI--------------SFGEKM 104
Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
+LG+ ++ YNI+I+ + + + A+ L ++++
Sbjct: 105 EILGIS---------------------HNLYTYNILINCFCRCSRLSLALALLGKMMKLG 143
Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
P IVT NSL+ GFC +++DA L+D + G +P VT+TT ++ +
Sbjct: 144 YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV 203
Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
AL+ M + P VTY V+ GLCK+ A+ LL M + + + Y+T+I S
Sbjct: 204 ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263
Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
CK + A L +M + P TY+ LI LC G +A LL + E I+
Sbjct: 264 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL 323
Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFCMM 599
V ++ +I A +G + KA + +M+++ + +I Y+ + FCM+
Sbjct: 324 VTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCML 371
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 233 bits (595), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 152/531 (28%), Positives = 256/531 (48%), Gaps = 16/531 (3%)
Query: 5 VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR 61
VY + G+ AV + ++KE S++ YN +L L +++ +Y D+K
Sbjct: 120 VYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEP 179
Query: 62 NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
NV+T ++++ LC+ +++ A L E + K P VS ++S C++G + + L
Sbjct: 180 NVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL- 238
Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
P YN LI+GLC + A E +M G+ P+ I+YS L
Sbjct: 239 ----AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNS 294
Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL--NVI 239
QI A+ + ++L +G P+I T + L+ G G + L L M+ +GF L NV+
Sbjct: 295 GQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI-RGFGLQPNVV 353
Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
AY+ L+ C G I +A+ + ME +G P++ TY LI G K+ + A+ ++N+M
Sbjct: 354 AYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKM 413
Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
+ PN + ++ LC EA + + NC V +N I G G +
Sbjct: 414 LTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRL 473
Query: 360 GEAVQLYRQLIEK-RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
A +++RQ+ ++ R P+IVT+N L+ G K ++ +A L I + G+E S+ TY T
Sbjct: 474 DWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNT 533
Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
++ C G L L+ +M P +T ++I CKQ K + A Q+L D+ G
Sbjct: 534 LLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML-DLVSCG 592
Query: 479 ---VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
PD I+Y +I C+ LL +M + P+ AT+++LI+
Sbjct: 593 RRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 143/572 (25%), Positives = 262/572 (45%), Gaps = 34/572 (5%)
Query: 65 TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
T ++I L ++ LQ+ + F S +++S Y ++G AE A +F +
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
++G P YN ++ L ++ DM R G EP+ TY++L K +++
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197
Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV---------------- 228
GA K++ ++ KG PD V+YT +I C++G V+EG +L E
Sbjct: 198 DGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLC 257
Query: 229 --------------MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
M+ +G NVI+YS L++ +C SG+I+ A L +M G P++
Sbjct: 258 KEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIY 317
Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSK-RISPNSFAHGAILLGLCEKEMITEARMYFDS 333
T S L++G + A+ L+N+M + PN A+ ++ G C I +A F
Sbjct: 318 TLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSH 377
Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
+ C ++ Y +I+G+ K G++ AV ++ +++ P++V + +++ C++ K
Sbjct: 378 MEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSK 437
Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH-VTYT 452
+A L++ + PS T+ F+ C+ G + + ++ME + P + VTY
Sbjct: 438 FKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYN 497
Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
++ GL K +++EA L ++++ GV TYNT++ C A QL+ +M +
Sbjct: 498 ELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVD 557
Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCL--LVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
P T N++I C G + A + LVS ++YT +I C
Sbjct: 558 GKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCRE 617
Query: 571 KAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN 602
+ +M+ G SI ++ C +L +
Sbjct: 618 DGVILLERMISAGIVPSIATWSVLINCFILDD 649
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/507 (22%), Positives = 223/507 (43%), Gaps = 59/507 (11%)
Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
+T+ ++ + + Q+ ++Q++ ++G + +I Y Q+G E +++
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136
Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
+ G +V Y+ +L ++ RI + +M+ G +P++ TY++L++ LCK +K
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV-LYN 347
V A +L EM +K P++ ++ ++ +CE ++ E R + + VV +YN
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF------EPVVSVYN 250
Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL------ 401
+I+G K + A +L R+++EK ISP+++++++LI C +G++ A L
Sbjct: 251 ALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKR 310
Query: 402 ------------------------------DTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
I+ GL+P+ V Y T + +C GNI +
Sbjct: 311 GCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVK 370
Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
+++ ME P TY +I G K+ L AV + M G P+ + Y ++
Sbjct: 371 AVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVE 430
Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL-QEHNIS 550
+ C+ ++A L+ M N P+ T+N I GLC G L A+ + + Q+H
Sbjct: 431 ALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP 490
Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SF 595
V Y ++ + +A ++ +G E S Y
Sbjct: 491 PNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQL 550
Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGG 622
M+ +G PD+ ++++A+ + G
Sbjct: 551 VGKMMVDGKSPDEITMNMIILAYCKQG 577
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 146/292 (50%), Gaps = 6/292 (2%)
Query: 10 GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYTN 66
G + AV V + M+E+ +I+TY SL+ D +++ + S NV
Sbjct: 366 GNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVY 425
Query: 67 SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM-L 125
+ +++ LC+ S+ ++A ++ + + PSV + NA + C G + A+ +F M
Sbjct: 426 TNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQ 485
Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
++ P+ +YN L+ GL A +EEA T ++ GVE + TY+ L G
Sbjct: 486 QHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPG 545
Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML--SQGFKLNVIAYSV 243
A +++ K+++ G PD +T ++I YC+ G E ++ +++ + ++ +VI+Y+
Sbjct: 546 IALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTN 605
Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
++ +C+S ++ + LL M + G+ P + T+S+LI D V Q
Sbjct: 606 VIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFILDDIVRAHDQF 657
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 92/231 (39%), Gaps = 25/231 (10%)
Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
+ +T+ + +G + + LLQ+M+ + + + VI + + AV++
Sbjct: 75 TPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMF 134
Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
+ G P YN ++ + ++ + + M EP TYN+L+ LC N
Sbjct: 135 YRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKN 194
Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
+ A LLV + V+YTT+I + C G +V++G E++ R
Sbjct: 195 NKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVG-----------LVKEGRELAER-- 241
Query: 592 TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
F P + ++ + D FEL M++ G+ P+
Sbjct: 242 ------------FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPN 280
>sp|Q9SAJ5|PP133_ARATH Pentatricopeptide repeat-containing protein At1g79540
OS=Arabidopsis thaliana GN=At1g79540 PE=2 SV=1
Length = 780
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 163/594 (27%), Positives = 279/594 (46%), Gaps = 13/594 (2%)
Query: 5 VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDL----YDDIKVSETP 60
Y++ GM AV +MKE D + + TYN +L + ++ + L Y+++
Sbjct: 136 AYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCS 195
Query: 61 RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
N+YT I++DGL ++ R DA + G+ P+ V+ ++S C+ G A+ A+ L
Sbjct: 196 PNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKL 255
Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
F M G +PD+ ++N L+ G C G M EA E + G YS L G
Sbjct: 256 FYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFR 315
Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
+ + A+++ +L K PDI+ YT+LI G + G +E+ LKL M S+G +
Sbjct: 316 ARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYC 375
Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
Y+ ++ ++C G ++E L EM PD T++ILI +C+ V +A +++ E+
Sbjct: 376 YNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIE 435
Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY----NIMIDGYVKL 356
SP+ A++ GLC+ + EAR+ + + + N D V+
Sbjct: 436 KSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVES 495
Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
G+I +A + + SP IV++N LI GFC+ G + A +LL+ ++L GL P +VTY
Sbjct: 496 GSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTY 555
Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL-LEDMY 475
T +N G + L + P Y ++ C++ K+ A L ++ +
Sbjct: 556 NTLINGLHRVGREEEAFKLFYAKDDFRHSP--AVYRSLMTWSCRKRKVLVAFNLWMKYLK 613
Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
I D+ T N I + F K + +A + L ++ E T Y I + GLC +G
Sbjct: 614 KISCLDDE-TANEIEQCF-KEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFH 671
Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
A + L+E I +T + +I C + A+ F ++ F++ R
Sbjct: 672 EALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPR 725
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 151/583 (25%), Positives = 267/583 (45%), Gaps = 53/583 (9%)
Query: 45 DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAG--KEFG--PSVVS 100
D+ W +++K + Y ++I + + A+ E+ G KEF P V +
Sbjct: 109 DLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAV----ESFGRMKEFDCRPDVFT 164
Query: 101 LNAIMSRYCKLG-FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
N I+ + F +A ++ MLK P+ +++ IL+ GL G +A + +DM
Sbjct: 165 YNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDM 224
Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
G+ P+ +TY+IL G A K+ ++ G+ PD V + L+ G+C++G +
Sbjct: 225 TGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRM 284
Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
E +L + GF L + YS L+ + ++ R +A L M +KPD++ Y+IL
Sbjct: 285 VEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTIL 344
Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
I+GL K K+ A++L + M SK ISP+++ + A++ LC + ++ E R + +
Sbjct: 345 IQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETES 404
Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
D + I+I + G + EA +++ ++ + SPS+ TFN+LI G CK+G++ +AR
Sbjct: 405 FPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARL 464
Query: 400 LLDTIKLHGLEPSAV------TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
LL +++ P+++ + + E G+I + L P V+Y V
Sbjct: 465 LLHKMEVG--RPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNV 522
Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
+I G C+ + A++LL + + G++PD +TYNT+I + +AF+L +
Sbjct: 523 LINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAK--DD 580
Query: 514 LEPTSATYNILIDGLCVNGD-----------LKNADCL---------------------- 540
+ A Y L+ C LK CL
Sbjct: 581 FRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALR 640
Query: 541 -LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
L+ L LT YT + C G H+A+ F + EK
Sbjct: 641 RLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREK 683
Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 131/473 (27%), Positives = 217/473 (45%), Gaps = 22/473 (4%)
Query: 180 LLSQISGA---WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
+LS+ +G W+ +++L G D + VLI Y ++G E+ ++ M +
Sbjct: 101 MLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRP 160
Query: 237 NVIAYSVLLSSMCKSGRIDE-ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
+V Y+V+L M + A + EM P+L T+ IL+ GL K+ + A ++
Sbjct: 161 DVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKM 220
Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
+++M + ISPN + ++ GLC++ +AR F + S D V +N ++DG+ K
Sbjct: 221 FDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCK 280
Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
LG + EA +L R + + ++SLI G + + A L + ++P +
Sbjct: 281 LGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIIL 340
Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
YT + + G I+ L LL M +K I P Y VIK LC + L+E L +M
Sbjct: 341 YTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMS 400
Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
PD T+ +I S C+ +R+A ++ ++ P+ AT+N LIDGLC +G+LK
Sbjct: 401 ETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELK 460
Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI-SIRDYTKS 594
A LL H + + + A + +H F MVE G + + RD
Sbjct: 461 EARLLL-----HKMEVGRPASLFLRLSHSGNRS-------FDTMVESGSILKAYRD---- 504
Query: 595 FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
G PD V++ F + GD+ +L V+ GL PD N
Sbjct: 505 -LAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYN 556
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 145/503 (28%), Positives = 245/503 (48%), Gaps = 35/503 (6%)
Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTN----DMGRHGVEPDAITYSILAKGFHLLSQISG 186
P + YN+L+ CI E +EF + DM G+ P T+++L + S +
Sbjct: 110 PSVYLYNLLLES-CIK---ERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDA 165
Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
A ++ ++ KG P+ T+ +L+ GYC+ G ++GL+L M S G N + Y+ ++S
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225
Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI-- 304
S C+ GR D++ ++ +M GL PD+VT++ I LCK+ KV A +++++M
Sbjct: 226 SFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLG 285
Query: 305 --SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
PNS + +L G C+ ++ +A+ F+S+ ++ + + YNI + G V+ G EA
Sbjct: 286 LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEA 345
Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
+ +Q+ +K I PSI ++N L+ G CK G ++DA+ ++ +K +G+ P AVTY ++
Sbjct: 346 ETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHG 405
Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
YC G + +LLQEM P T +++ L K ++ EA +LL M G D
Sbjct: 406 YCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLD 465
Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLH-----------------------NLEPTSA 519
+T N I+ C +L KA +++ M +H N P
Sbjct: 466 TVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLI 525
Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
TY+ L++GLC G A L + + VAY I C +G + A M
Sbjct: 526 TYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDM 585
Query: 580 VEKGFEISIRDYTKSFFCMMLSN 602
+KG S+ Y + + N
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKN 608
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 158/583 (27%), Positives = 270/583 (46%), Gaps = 49/583 (8%)
Query: 6 YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
+ R G D+ ++ KM+E L I T+NS
Sbjct: 227 FCREGRNDDSEKMVEKMREEGLVPDIVTFNSR---------------------------- 258
Query: 66 NSIVIDGLCQQSRLQDAILFLQETAGKEF----GPSVVSLNAIMSRYCKLGFAEVAKGLF 121
I LC++ ++ DA + E+ P+ ++ N ++ +CK+G E AK LF
Sbjct: 259 ----ISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLF 314
Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
+ + SYNI + GL G EA M G+ P +Y+IL G L
Sbjct: 315 ESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKL 374
Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
+S A ++ + G PD VTY L+ GYC +G V+ L + M+ N
Sbjct: 375 GMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTC 434
Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
++LL S+ K GRI EA LL +M G D VT +I++ GLC ++ KAI++ M
Sbjct: 435 NILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM-- 492
Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
R+ HG+ LG I + DSLI +NC+ D++ Y+ +++G K G E
Sbjct: 493 -RV------HGSAALGNLGNSYIG---LVDDSLIENNCLPDLITYSTLLNGLCKAGRFAE 542
Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
A L+ +++ +++ P V +N I+ FCK GK++ A R+L ++ G S TY + +
Sbjct: 543 AKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLIL 602
Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
+ I + L+ EM+ K I P TY I+ LC+ K+++A LL++M + P
Sbjct: 603 GLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAP 662
Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
+ ++ +I +FCK D A ++ + + Y+++ + L G L A LL
Sbjct: 663 NVFSFKYLIEAFCKVPDFDMAQEVF-ETAVSICGQKEGLYSLMFNELLAAGQLLKATELL 721
Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
++ + L Y ++++ C + ++ A +M+++G+
Sbjct: 722 EAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGY 764
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 142/604 (23%), Positives = 271/604 (44%), Gaps = 32/604 (5%)
Query: 5 VYSRTGMVHDAV--FVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSET 59
+++++ + A F + + + + K S+ YN LL + R + + LY D+ +
Sbjct: 84 IFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGI 143
Query: 60 PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
YT +++I LC S + A E K P+ + ++ YCK G +
Sbjct: 144 APQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLE 203
Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
L M +G+ P+ YN ++ C G +++ + M G+ PD +T++
Sbjct: 204 LLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALC 263
Query: 180 LLSQISGAWKVIQKLLIKG----SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
++ A ++ + + P+ +TY +++ G+C++G +E+ L E +
Sbjct: 264 KEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDL 323
Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
++ +Y++ L + + G+ EA +L +M G+ P + +Y+IL+ GLCK + A +
Sbjct: 324 ASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTI 383
Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
M + P++ +G +L G C + A+ ++ +NC+ + NI++ K
Sbjct: 384 VGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWK 443
Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE----- 410
+G I EA +L R++ EK VT N ++ G C +G++ A ++ +++HG
Sbjct: 444 MGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNL 503
Query: 411 ------------------PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
P +TY+T +N C+ G L EM + + P V Y
Sbjct: 504 GNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYN 563
Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
+ I CKQ K+ A ++L+DM G TYN++I + + L+++M
Sbjct: 564 IFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK 623
Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
+ P TYN I LC +++A LL + + NI+ ++ +I+A C D A
Sbjct: 624 GISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMA 683
Query: 573 MTFF 576
F
Sbjct: 684 QEVF 687
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 134/555 (24%), Positives = 252/555 (45%), Gaps = 27/555 (4%)
Query: 55 KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
+ E +VY +++++ ++ R++ ++ P + N ++ C
Sbjct: 104 RFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCV 163
Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
+ A+ LF M + G P+ F++ IL+ G C AG ++ LE N M GV P+ + Y+ +
Sbjct: 164 DAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTI 223
Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
F + + K+++K+ +G PDIVT+ I C+ G V + ++ M +
Sbjct: 224 VSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEY 283
Query: 235 ----KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
+ N I Y+++L CK G +++A L + L +Y+I ++GL + K
Sbjct: 284 LGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFI 343
Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
+A + +M K I P+ +++ ++ GLC+ M+++A+ + + D V Y ++
Sbjct: 344 EAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLL 403
Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
GY +G + A L ++++ P+ T N L++ K G++++A LL + G
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYG 463
Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEME---TKAIG--------------------PT 447
VT ++ C G + + + +++ M + A+G P
Sbjct: 464 LDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPD 523
Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
+TY+ ++ GLCK + EA L +M + PD + YN I FCK + AF++L
Sbjct: 524 LITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLK 583
Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
M + TYN LI GL + + L+ ++E IS Y T I+ C
Sbjct: 584 DMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGE 643
Query: 568 DVHKAMTFFCQMVEK 582
V A +M++K
Sbjct: 644 KVEDATNLLDEMMQK 658
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 138/549 (25%), Positives = 241/549 (43%), Gaps = 69/549 (12%)
Query: 8 RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLR-----HTDIMWD---LYDDIKVSET 59
+ G V DA + + M ELD + + NS+ YNL ++ D L++ I+ ++
Sbjct: 264 KEGKVLDASRIFSDM-ELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDD 322
Query: 60 PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
++ + +I + GL + + +A L++ K GPS+ S N +M CKLG AK
Sbjct: 323 LASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKT 382
Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
+ LM + G+ PDA +Y L+HG C G ++ A +M R+ P+A T +IL
Sbjct: 383 IVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLW 442
Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL--- 236
+ +IS A ++++K+ KG D VT +++ G C G +++ +++ + M G
Sbjct: 443 KMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGN 502
Query: 237 --------------------NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
++I YS LL+ +CK+GR EA L EM L+PD V Y
Sbjct: 503 LGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAY 562
Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
+I I CKQ K+ A ++ +M K + + +++LGL K I E D +
Sbjct: 563 NIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKE 622
Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK------ 390
++ YN I + + +A L ++++K I+P++ +F LI FCK
Sbjct: 623 KGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDM 682
Query: 391 ----------------------------NGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
G++ A LL+ + G E Y + +
Sbjct: 683 AQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVES 742
Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE---DMYVIGV 479
C++ ++ +L +M + G VI GL K +EA + +M +G
Sbjct: 743 LCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGE 802
Query: 480 TPDQITYNT 488
+++ N
Sbjct: 803 VANKVDPNA 811
Score = 159 bits (402), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 120/481 (24%), Positives = 202/481 (41%), Gaps = 77/481 (16%)
Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
K +V Y++LL S K R++ L +M G+ P T+++LIR LC V A +
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
L++EM K PN F G ++ G C+ + + +++ + + V+YN ++ +
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH---GL-E 410
+ G ++ ++ ++ E+ + P IVTFNS I CK GKV DA R+ ++L GL
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 411 PSAVTYTTFMNAYCEEGNIQRLLAL----------------------------------- 435
P+++TY + +C+ G ++ L
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
L++M K IGP+ +Y +++ GLCK L +A ++ M GV PD +TY ++ +C
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408
Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
+ A LL +M +N P + T NIL+ L G + A+ LL + E L V
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVT 468
Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFE---------ISIRDYT-------------- 592
I+ C G++ KA+ M G I + D +
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYS 528
Query: 593 ---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKS 637
K+ F M+ PD + + F + G + S F + M K
Sbjct: 529 TLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKK 588
Query: 638 G 638
G
Sbjct: 589 G 589
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 180/408 (44%), Gaps = 28/408 (6%)
Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ-LYNEMCSKRISPNSFAHGAILLGLCEK 321
E + L IL+R K+H+ IQ L+N + S I + ++ + K
Sbjct: 33 ESHGISLDATPTIARILVRA-----KMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAK 87
Query: 322 EMITEARMYFDSLIMSNCIQD---VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
+ L+ S ++ V LYN++++ +K + LY+ ++ I+P
Sbjct: 88 SNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQT 147
Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
TFN LI C + V AR L D + G +P+ T+ + YC+ G + L LL
Sbjct: 148 YTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNA 207
Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
ME+ + P V Y ++ C++ + ++ +++E M G+ PD +T+N+ I + CK
Sbjct: 208 MESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGK 267
Query: 499 LRKAFQLLNQMWLHNL----EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
+ A ++ + M L P S TYN+++ G C G L++A L S++E++ +
Sbjct: 268 VLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQ 327
Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMM 599
+Y ++ G +A T QM +KG SI Y K+ +M
Sbjct: 328 SYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLM 387
Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
NG PD +L + G + + L M+++ LP+ + N
Sbjct: 388 KRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCN 435
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 155/675 (22%), Positives = 300/675 (44%), Gaps = 54/675 (8%)
Query: 18 VIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLC 74
V+ M++ + + Y +L+ + H+D+M L+ ++ V+ + +I G
Sbjct: 155 VVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFA 214
Query: 75 QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
++ R+ A+ L E +V N + + K+G ++A F + GL PD
Sbjct: 215 KEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEV 274
Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
+Y +I LC A ++EA+E + ++ P Y+ + G+ + A+ ++++
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334
Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
KGS P ++ Y ++ ++G V+E LK+ E M + N+ Y++L+ +C++G++
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKL 393
Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
D A L M+ GL P++ T +I++ LCK K+ +A ++ EM K +P+ ++
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSL 453
Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
+ GL + + +A ++ ++ S+C + ++Y +I + G + ++Y+ +I +
Sbjct: 454 IDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNC 513
Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF--------------- 419
SP + N+ + K G+ R + + IK P A +Y+
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE 573
Query: 420 --------------------MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
++ +C+ G + + LL+EM+TK PT VTY VI GL
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633
Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
K +L EA L E+ + + + Y+++I F K + +A+ +L ++ L P
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLY 693
Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
T+N L+D L ++ A S++E + +V Y +I C +KA F+ +M
Sbjct: 694 TWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEM 753
Query: 580 VEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDL 624
++G + S YT + F +NG PD M+ G
Sbjct: 754 QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRA 813
Query: 625 GSVFELAAVMIKSGL 639
F L + GL
Sbjct: 814 MDAFSLFEETRRRGL 828
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 159/671 (23%), Positives = 299/671 (44%), Gaps = 59/671 (8%)
Query: 6 YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN---LRHTDIMWDLYDDIKVSETPRN 62
+++ G V A+ ++ +MK L I YN + + + D+ W + +I+ + +
Sbjct: 213 FAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPD 272
Query: 63 VYTNSIVIDGLCQQSRLQDAI-----------------------------------LFLQ 87
T + +I LC+ +RL +A+ L+
Sbjct: 273 EVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE 332
Query: 88 ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
K PSV++ N I++ K+G + A +F M K P+ +YNILI LC AG
Sbjct: 333 RQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAG 391
Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
++ A E + M + G+ P+ T +I+ ++ A + +++ K PD +T+
Sbjct: 392 KLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFC 451
Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
LI G ++G V++ K+ E ML + N I Y+ L+ + GR ++ + +M
Sbjct: 452 SLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ 511
Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
PDL + + + K + K ++ E+ ++R P++ ++ ++ GL + E
Sbjct: 512 NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANET 571
Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
F S+ C+ D YNI+IDG+ K G + +A QL ++ K P++VT+ S+I G
Sbjct: 572 YELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDG 631
Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
K ++ +A L + K +E + V Y++ ++ + + G I +L+E+ K + P
Sbjct: 632 LAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 691
Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
T+ ++ L K ++ EA+ + M + TP+Q+TY +I CK + KAF
Sbjct: 692 LYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQ 751
Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
+M ++P++ +Y +I GL G++ A L + + Y +I+
Sbjct: 752 EMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL---S 808
Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
+ ++AM F S F G P + C V+L H+ L
Sbjct: 809 NGNRAMDAF-----------------SLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
Query: 628 FELAAVMIKSG 638
+ AV+ ++G
Sbjct: 852 AIVGAVLRETG 862
Score = 216 bits (550), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 147/590 (24%), Positives = 268/590 (45%), Gaps = 39/590 (6%)
Query: 32 QTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQE 88
++YNSLL + R+ D + + ++ V+ +V T ++ G + ++L++ +Q
Sbjct: 99 ESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQM 158
Query: 89 TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGS 148
+F P+ + ++ + + +++ LF M + G P + LI G G
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT- 207
++ AL ++M ++ D + Y++ F + ++ AWK ++ G PD VTYT
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278
Query: 208 ----------------------------------VLICGYCQIGNVEEGLKLREVMLSQG 233
+I GY G +E L E ++G
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
+VIAY+ +L+ + K G++DEAL + EM+ P+L TY+ILI LC+ K+ A
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAF 397
Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
+L + M + PN ++ LC+ + + EA F+ + C D + + +IDG
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL 457
Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
K+G + +A ++Y ++++ + + + SLI F +G+ D ++ + P
Sbjct: 458 GKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDL 517
Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
T+M+ + G ++ A+ +E++ + P +Y+++I GL K E +L
Sbjct: 518 QLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYS 577
Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
M G D YN +I FCKC + KA+QLL +M EPT TY +IDGL
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDR 637
Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
L A L + I L V Y+++I G + +A ++++KG
Sbjct: 638 LDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Score = 185 bits (470), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 123/499 (24%), Positives = 225/499 (45%), Gaps = 36/499 (7%)
Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
G P + ++ G A + E + M + P Y+ L F ++
Sbjct: 128 GFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMM 187
Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
+ Q++ G +P + +T LI G+ + G V+ L L + M S +++ Y+V + S
Sbjct: 188 LTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDS 247
Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
K G++D A +E+EA GLKPD VTY+ +I LCK +++ +A++++ + R P
Sbjct: 248 FGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC 307
Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
++A+ +++G EA + I V+ YN ++ K+G + EA++++
Sbjct: 308 TYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFE 367
Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
++ +K +P++ T+N LI C+ GK+ A L D+++ GL P+ T ++ C+
Sbjct: 368 EM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQ 426
Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
+ A+ +EM+ K P +T+ +I GL K ++ +A ++ E M + I Y
Sbjct: 427 KLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYT 486
Query: 488 TIIRSF--------------------C---------------KCKDLRKAFQLLNQMWLH 512
++I++F C K + K + ++
Sbjct: 487 SLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKAR 546
Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
P + +Y+ILI GL G L S++E L AY +I C G V+KA
Sbjct: 547 RFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKA 606
Query: 573 MTFFCQMVEKGFEISIRDY 591
+M KGFE ++ Y
Sbjct: 607 YQLLEEMKTKGFEPTVVTY 625
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 225 bits (574), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 120/421 (28%), Positives = 222/421 (52%), Gaps = 3/421 (0%)
Query: 96 PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
PS+V + ++S+ K ++ LF M G+ D +SYNI+I+ LC AL
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
M + G EPD +T S L GF +++ A ++ K+ G PD+V Y +I G C+
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
IG V + ++L + M G + + + Y+ L++ +C SGR +A L+ +M + P+++T
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
++ +I K+ K +A++LY EM + + P+ F + +++ GLC + EA+ D ++
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
C+ DVV YN +I+G+ K + E +L+R++ ++ + +T+N++I G+ + G+
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
A+ + + P+ TY+ + C +++ L L + M+ I TY +VI
Sbjct: 367 AAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 423
Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
G+CK +++A L + G+ PD ++Y T+I FC+ + K+ L +M L
Sbjct: 424 HGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Query: 516 P 516
P
Sbjct: 484 P 484
Score = 206 bits (524), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 123/467 (26%), Positives = 222/467 (47%), Gaps = 14/467 (2%)
Query: 83 ILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHG 142
+ F+ G+ F S+N E LFC M++ P ++ ++
Sbjct: 30 VPFISRFWGRTFSTKRSSMNL-----------EEEIDLFCKMIQSRPLPSIVDFSKVLSK 78
Query: 143 LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
+ + + + + + M G+ D +Y+I+ S+ A V+ K++ G +PD
Sbjct: 79 IAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPD 138
Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
+VT + LI G+CQ V + + L M GF+ +V+ Y+ ++ CK G +++A+ L
Sbjct: 139 VVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFD 198
Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
ME G++ D VTY+ L+ GLC + A +L +M + I PN A++ ++
Sbjct: 199 RMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEG 258
Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
+EA ++ + DV YN +I+G G + EA Q+ ++ K P +VT+N
Sbjct: 259 KFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYN 318
Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
+LI GFCK+ +V + +L + GL +TY T + Y + G + M+++
Sbjct: 319 TLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR 378
Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
P TY++++ GLC W++++A+ L E+M + D TYN +I CK ++ A
Sbjct: 379 ---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDA 435
Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
+ L + L+P +Y +I G C +D L +QE +
Sbjct: 436 WDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Score = 202 bits (513), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/350 (32%), Positives = 190/350 (54%), Gaps = 3/350 (0%)
Query: 62 NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
+V T S +I+G CQ +R+ DAI + + F P VV N I+ CK+G A LF
Sbjct: 138 DVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELF 197
Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
M + G+ DA +YN L+ GLC +G +A DM + P+ IT++ + F
Sbjct: 198 DRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKE 257
Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
+ S A K+ +++ + DPD+ TY LI G C G V+E ++ ++M+++G +V+ Y
Sbjct: 258 GKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTY 317
Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
+ L++ CKS R+DE L EM GL D +TY+ +I+G + + A ++++ M S
Sbjct: 318 NTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS 377
Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
+ PN + +L GLC + +A + F+++ S D+ YNI+I G K+GN+ +
Sbjct: 378 R---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVED 434
Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
A L+R L K + P +V++ ++I GFC+ + + L ++ GL P
Sbjct: 435 AWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 195 bits (496), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 200/383 (52%), Gaps = 3/383 (0%)
Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
D+ +Y ++I C+ L + M+ G++ +V+ S L++ C+ R+ +A+ L+
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
+ME +G +PD+V Y+ +I G CK V+ A++L++ M + ++ + +++ GLC
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
++A ++M + + +V+ + +ID +VK G EA++LY ++ + + P + T+
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 282
Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
NSLI G C +G+V +A+++LD + G P VTY T +N +C+ + L +EM
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 342
Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
+ + +TY +I+G + + A ++ M P+ TY+ ++ C + K
Sbjct: 343 RGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEK 399
Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
A L M +E TYNI+I G+C G++++A L SL + V+YTT+I
Sbjct: 400 ALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMIS 459
Query: 562 AHCAEGDVHKAMTFFCQMVEKGF 584
C + K+ + +M E G
Sbjct: 460 GFCRKRQWDKSDLLYRKMQEDGL 482
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 212/430 (49%), Gaps = 9/430 (2%)
Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
T+S +L +I K+IQ + P IV ++ ++ + N + + L M
Sbjct: 40 TFSTKRSSMNLEEEIDLFCKMIQSRPL----PSIVDFSKVLSKIAKSKNYDLVISLFHHM 95
Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
G ++ +Y+++++ +C+ R AL ++ +M G +PD+VT S LI G C+ ++V
Sbjct: 96 EVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRV 155
Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
AI L ++M P+ + I+ G C+ ++ +A FD + D V YN +
Sbjct: 156 FDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSL 215
Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
+ G G +A +L R ++ + I P+++TF ++I F K GK ++A +L + + +
Sbjct: 216 VAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCV 275
Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
+P TY + +N C G + +L M TK P VTY +I G CK ++ E +
Sbjct: 276 DPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTK 335
Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
L +M G+ D ITYNTII+ + + A ++ ++M + P TY+IL+ GLC
Sbjct: 336 LFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLC 392
Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
+N ++ A L ++Q+ I L Y +I C G+V A F + KG + +
Sbjct: 393 MNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVV 452
Query: 590 DYTK--SFFC 597
YT S FC
Sbjct: 453 SYTTMISGFC 462
Score = 192 bits (488), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 231/448 (51%), Gaps = 7/448 (1%)
Query: 3 AFVYSRTGM-VHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSE 58
F R+ M + + + + KM + SI ++ +L + ++ D++ L+ ++V
Sbjct: 40 TFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCG 99
Query: 59 TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
++Y+ +IVI+ LC+ SR A+ + + + P VV+++++++ +C+ A
Sbjct: 100 IGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAI 159
Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
L M + G PD YN +I G C G + +A+E + M R GV DA+TY+ L G
Sbjct: 160 DLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGL 219
Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
+ S A ++++ ++++ P+++T+T +I + + G E +KL E M + +V
Sbjct: 220 CCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDV 279
Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
Y+ L++ +C GR+DEA +L M G PD+VTY+ LI G CK +V + +L+ E
Sbjct: 280 FTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFRE 339
Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
M + + ++ + I+ G + A+ F + + ++ Y+I++ G
Sbjct: 340 MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWR 396
Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
+ +A+ L+ + + I I T+N +I+G CK G V DA L ++ GL+P V+YTT
Sbjct: 397 VEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTT 456
Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGP 446
++ +C + + L ++M+ + P
Sbjct: 457 MISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 132/305 (43%), Gaps = 15/305 (4%)
Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
N+ E + L+ ++I+ R PSIV F+ ++ K+ L +++ G+ +Y
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
+N C L+++ +M P VT + +I G C+ ++ +A+ L+ M +
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
G PD + YNTII CK + A +L ++M + + TYN L+ GLC +G +A
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT----- 592
L+ + +I + +T +I EG +AM + +M + + + Y
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
Query: 593 ----------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
K +M++ G PD ++ F + + +L M + GL+ D
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348
Query: 643 KFLIN 647
N
Sbjct: 349 TITYN 353
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 118/282 (41%), Gaps = 6/282 (2%)
Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
F +I S + +V ++ ++ K N + L+ + I + ++N +I C+
Sbjct: 57 FCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCR 116
Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
+ A ++ + G EP VT ++ +N +C+ + + L+ +ME P V
Sbjct: 117 CSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVI 176
Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
Y +I G CK + +AV+L + M GV D +TYN+++ C A +L+ M
Sbjct: 177 YNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMV 236
Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
+ ++ P T+ +ID G A L + + Y ++I C G V
Sbjct: 237 MRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVD 296
Query: 571 KAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICE 612
+A MV KG + Y L NGF + + E
Sbjct: 297 EAKQMLDLMVTKGCLPDVVTYNT------LINGFCKSKRVDE 332
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 194/343 (56%)
Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
+L GF LNV +++L++ CK G I +A + E+ L+P +V+++ LI G CK
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
+ + +L ++M R P+ F + A++ LC++ + A FD + I + V++
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350
Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
+I G+ + G I + Y++++ K + P IV +N+L+ GFCKNG + AR ++D + G
Sbjct: 351 LIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410
Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
L P +TYTT ++ +C G+++ L + +EM+ I V ++ ++ G+CK+ ++ +A
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAE 470
Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
+ L +M G+ PD +TY ++ +FCK D + F+LL +M P+ TYN+L++GL
Sbjct: 471 RALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGL 530
Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
C G +KNAD LL ++ + + Y T+++ H + K
Sbjct: 531 CKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSK 573
Score = 216 bits (549), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 125/400 (31%), Positives = 212/400 (53%), Gaps = 20/400 (5%)
Query: 101 LNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMG 160
++A+M Y LGF A F L K+ +++ I G G++ + + N G
Sbjct: 173 VDALMITYTDLGFIPDAIQCFRLSRKH-------RFDVPIRG---CGNLLDRMMKLNPTG 222
Query: 161 R----------HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
G + ++IL F IS A KV ++ + P +V++ LI
Sbjct: 223 TIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLI 282
Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
GYC++GN++EG +L+ M + +V YS L++++CK ++D A GL EM GL
Sbjct: 283 NGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLI 342
Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
P+ V ++ LI G + ++ + Y +M SK + P+ + ++ G C+ + AR
Sbjct: 343 PNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNI 402
Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
D +I D + Y +IDG+ + G++ A+++ +++ + I V F++L+ G CK
Sbjct: 403 VDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCK 462
Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
G+V DA R L + G++P VTYT M+A+C++G+ Q LL+EM++ P+ VT
Sbjct: 463 EGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVT 522
Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
Y V++ GLCK +++ A LL+ M IGV PD ITYNT++
Sbjct: 523 YNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562
Score = 182 bits (462), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 201/424 (47%), Gaps = 45/424 (10%)
Query: 2 LAFVYSRTGMVHDAV--FVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKV 56
L Y+ G + DA+ F +++ D V I+ +LL L T +W Y +I
Sbjct: 176 LMITYTDLGFIPDAIQCFRLSRKHRFD--VPIRGCGNLLDRMMKLNPTGTIWGFYMEILD 233
Query: 57 SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
+ P NVY +I+++ C++ + DA E + P+VVS N +++ YCK+G +
Sbjct: 234 AGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDE 293
Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH-------------- 162
L M K PD F+Y+ LI+ LC M+ A ++M +
Sbjct: 294 GFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIH 353
Query: 163 ---------------------GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDP 201
G++PD + Y+ L GF + A ++ ++ +G P
Sbjct: 354 GHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP 413
Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
D +TYT LI G+C+ G+VE L++R+ M G +L+ + +S L+ MCK GR+ +A L
Sbjct: 414 DKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERAL 473
Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
EM G+KPD VTY++++ CK+ +L EM S P+ + +L GLC+
Sbjct: 474 REMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKL 533
Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
+ A M D+++ + D + YN +++G+ + N + + Y Q E I + ++
Sbjct: 534 GQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHAN---SSKRYIQKPEIGIVADLASY 590
Query: 382 NSLI 385
S++
Sbjct: 591 KSIV 594
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 165/353 (46%), Gaps = 20/353 (5%)
Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
Y E+ N + ++ C++ I++A+ FD + + VV +N +I+GY
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286
Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
K+GN+ E +L Q+ + R P + T+++LI CK K+ A L D + GL P+ V
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346
Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
+TT ++ + G I + Q+M +K + P V Y ++ G CK L A +++ M
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406
Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
G+ PD+ITY T+I FC+ D+ A ++ +M + +E ++ L+ G+C G +
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRV 466
Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKS 594
+A+ L + I V YT ++ A C +GD +M G S+ Y
Sbjct: 467 IDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYN-- 524
Query: 595 FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
+L NG +C++ G + + L M+ G++PD N
Sbjct: 525 ----VLLNG------LCKL--------GQMKNADMLLDAMLNIGVVPDDITYN 559
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 145/308 (47%), Gaps = 15/308 (4%)
Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
++D +KL G Y ++++ ++ FN L+ FCK G ++DA+++ D I
Sbjct: 211 LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS 270
Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
L+P+ V++ T +N YC+ GN+ L +ME P TY+ +I LCK+ K+ A
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330
Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
L ++M G+ P+ + + T+I + ++ + +M L+P YN L++G
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390
Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
C NGDL A ++ + + K+ YTT+I C GDV A+ +M + G E+
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDR 450
Query: 589 RDYTKSFFCM---------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAV 633
++ M ML G PD +M+ AF + GD + F+L
Sbjct: 451 VGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKE 510
Query: 634 MIKSGLLP 641
M G +P
Sbjct: 511 MQSDGHVP 518
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 223 bits (569), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 140/485 (28%), Positives = 234/485 (48%), Gaps = 39/485 (8%)
Query: 111 LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT 170
L F E A LF M++ P + L++ + + + + + GV D T
Sbjct: 51 LQFNE-ALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYT 109
Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
++L F SQ A + K++ G +PDIVT+T LI G+C +EE + + M+
Sbjct: 110 CNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV 169
Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
G K +V+ Y+ ++ S+CK+G ++ AL L +ME G++PD+V Y+ L+ GLC +
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
A L M ++I P DV+ +N +I
Sbjct: 230 DADSLLRGMTKRKIKP-----------------------------------DVITFNALI 254
Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
D +VK G +A +LY ++I I+P+I T+ SLI GFC G V +AR++ ++ G
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCF 314
Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
P V YT+ +N +C+ + + + EM K + +TYT +I+G + K A ++
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374
Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE---PTSATYNILIDG 527
M GV P+ TYN ++ C ++KA + M ++ P TYN+L+ G
Sbjct: 375 FSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHG 434
Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
LC NG L+ A + +++ + + + YT II+ C G V A+ FC + KG + +
Sbjct: 435 LCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPN 494
Query: 588 IRDYT 592
+ YT
Sbjct: 495 VVTYT 499
Score = 222 bits (565), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 239/458 (52%), Gaps = 3/458 (0%)
Query: 96 PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
PS++ +++ K+ +V L + G+ D ++ N+L++ C + A F
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129
Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
M + G EPD +T++ L GF L +++ A ++ +++ G PD+V YT +I C+
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189
Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
G+V L L + M + G + +V+ Y+ L++ +C SGR +A LL M +KPD++T
Sbjct: 190 NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249
Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
++ LI K+ K A +LYNEM I+PN F + +++ G C + + EAR F +
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
C DVV Y +I+G+ K + +A++++ ++ +K ++ + +T+ +LI GF + GK
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369
Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK---AIGPTHVTYT 452
A+ + + G+ P+ TY ++ C G +++ L + ++M+ + + P TY
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429
Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
V++ GLC KL++A+ + EDM + ITY II+ CK ++ A L +
Sbjct: 430 VLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK 489
Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
++P TY +I GL G A L ++E +S
Sbjct: 490 GVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 225/458 (49%), Gaps = 38/458 (8%)
Query: 36 SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG 95
+++ ++ D++ +L D +++ ++YT +++++ CQ S+ A FL + F
Sbjct: 80 NVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFE 139
Query: 96 PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
P +V+ ++++ +C E A + M++ G+ PD Y +I LC G + AL
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSL 199
Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
+ M +G+ PD + Y+ L G + A +++ + + PD++T+ LI + +
Sbjct: 200 FDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK 259
Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
G + +L M+ N+ Y+ L++ C G +DEA + Y ME G PD+V
Sbjct: 260 EGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVA 319
Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
Y+ LI G CK KV A++++ EM K ++ N+
Sbjct: 320 YTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT--------------------------- 352
Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
+ Y +I G+ ++G A +++ ++ + + P+I T+N L++ C NGKV
Sbjct: 353 --------ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK 404
Query: 396 DARRLLDTIK---LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
A + + ++ + G+ P+ TY ++ C G +++ L + ++M + + +TYT
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYT 464
Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
++I+G+CK K++ AV L + GV P+ +TY T+I
Sbjct: 465 IIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI 502
Score = 186 bits (471), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 202/386 (52%), Gaps = 3/386 (0%)
Query: 62 NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
++ T + +I+G C +R+++A+ + + P VV I+ CK G A LF
Sbjct: 141 DIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF 200
Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
M YG+ PD Y L++GLC +G +A M + ++PD IT++ L F
Sbjct: 201 DQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKE 260
Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
+ A ++ +++ P+I TYT LI G+C G V+E ++ +M ++G +V+AY
Sbjct: 261 GKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAY 320
Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
+ L++ CK ++D+A+ + YEM GL + +TY+ LI+G + K + A ++++ M S
Sbjct: 321 TSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVS 380
Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLI---MSNCIQDVVLYNIMIDGYVKLGN 358
+ + PN + +L LC + +A M F+ + M ++ YN+++ G G
Sbjct: 381 RGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGK 440
Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
+ +A+ ++ + ++ + I+T+ +I G CK GKV +A L ++ G++P+ VTYTT
Sbjct: 441 LEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTT 500
Query: 419 FMNAYCEEGNIQRLLALLQEMETKAI 444
++ EG L ++M+ +
Sbjct: 501 MISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 162/358 (45%)
Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
Y +L + S + +EAL L M P ++ ++ L+ + K K I L + +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
+S + + ++ C+ A + ++ D+V + +I+G+ +
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
EA+ + Q++E I P +V + ++I CKNG V A L D ++ +G+ P V YT+ +
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
N C G + +LL+ M + I P +T+ +I K+ K +A +L +M + +
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279
Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
P+ TY ++I FC + +A Q+ M P Y LI+G C + +A +
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339
Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
+ + ++ + YTT+I+ G + A F MV +G +IR Y C+
Sbjct: 340 FYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397
Score = 40.8 bits (94), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 45/237 (18%), Positives = 82/237 (34%), Gaps = 15/237 (6%)
Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
+GN + L+ + ++ Y +++ + EA+ L M P I
Sbjct: 15 KGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIID 74
Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
+ ++ K K L + + + + T N+L++ C + A L +
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK------------ 593
+ V +T++I C + +AM+ QMVE G + + YT
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVN 194
Query: 594 ---SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
S F M + G PD + ++ G L M K + PD N
Sbjct: 195 YALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFN 251
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 222 bits (566), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 154/590 (26%), Positives = 277/590 (46%), Gaps = 35/590 (5%)
Query: 5 VYSRTGMVHDAVFVIAKMKEL-DLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNV 63
Y + M A+ V +M+E+ + +I++YN+LL N
Sbjct: 87 TYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLL-----------------------NA 123
Query: 64 YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
+ + +Q +++ ETAG P++ + N ++ CK E A+G
Sbjct: 124 FVEA-------KQWVKVESLFAYFETAG--VAPNLQTYNVLIKMSCKKKEFEKARGFLDW 174
Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
M K G PD FSY+ +I+ L AG +++ALE ++M GV PD Y+IL GF
Sbjct: 175 MWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKD 234
Query: 184 ISGAWKVIQKLLIKGS-DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
A ++ +LL S P++ T+ ++I G + G V++ LK+ E M + ++ YS
Sbjct: 235 HKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYS 294
Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
L+ +C +G +D+A + E++ D+VTY+ ++ G C+ K+ ++++L+ M K
Sbjct: 295 SLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHK 354
Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
S N ++ ++ GL E I EA M + + D Y I I G G + +A
Sbjct: 355 N-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKA 413
Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
+ + +++ + + S+I CK ++ +A L+ + HG+E ++ +
Sbjct: 414 LGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGG 473
Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
+ + L+EM PT V+Y ++I GLCK K EA +++M G PD
Sbjct: 474 LIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPD 533
Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
TY+ ++ C+ + + A +L +Q LE +NILI GLC G L +A ++
Sbjct: 534 LKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMA 593
Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
+++ N + V Y T+++ GD ++A + M + G + I Y
Sbjct: 594 NMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYN 643
Score = 213 bits (542), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 133/502 (26%), Positives = 250/502 (49%), Gaps = 2/502 (0%)
Query: 62 NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
+V++ S VI+ L + +L DA+ E + + P V N ++ + K + A L+
Sbjct: 183 DVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELW 242
Query: 122 CLMLK-YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
+L+ ++P+ ++NI+I GL G +++ L+ M ++ E D TYS L G
Sbjct: 243 DRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCD 302
Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
+ A V +L + + D+VTY ++ G+C+ G ++E L+L +M + +N+++
Sbjct: 303 AGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVS 361
Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
Y++L+ + ++G+IDEA + M A G D TY I I GLC V+KA+ + E+
Sbjct: 362 YNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVE 421
Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
S + +A+ +I+ LC+K+ + EA + + + N +I G ++ +G
Sbjct: 422 SSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLG 481
Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
EA R++ + P++V++N LI G CK GK +A + + +G +P TY+ +
Sbjct: 482 EASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILL 541
Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
C + I L L + + + + ++I GLC KL +A+ ++ +M T
Sbjct: 542 CGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCT 601
Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
+ +TYNT++ F K D +A + M+ L+P +YN ++ GLC+ + A
Sbjct: 602 ANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEF 661
Query: 541 LVSLQEHNISLTKVAYTTIIKA 562
+ H I T + +++A
Sbjct: 662 FDDARNHGIFPTVYTWNILVRA 683
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/506 (25%), Positives = 251/506 (49%), Gaps = 11/506 (2%)
Query: 27 LKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAI 83
K + +Y++++ +L D +L+D++ +V +I+IDG ++ + A+
Sbjct: 180 FKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAM 239
Query: 84 -LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHG 142
L+ + P+V + N ++S K G + ++ M + D ++Y+ LIHG
Sbjct: 240 ELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHG 299
Query: 143 LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA---WKVIQKLLIKGS 199
LC AG++++A N++ D +TY+ + GF +I + W++++ +
Sbjct: 300 LCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEH----KN 355
Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
+IV+Y +LI G + G ++E + +M ++G+ + Y + + +C +G +++ALG
Sbjct: 356 SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALG 415
Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
++ E+E+ G D+ Y+ +I LCK+ ++ +A L EM + NS A++ GL
Sbjct: 416 VMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLI 475
Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
+ EA + + + C VV YNI+I G K G GEA ++++E P +
Sbjct: 476 RDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLK 535
Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
T++ L+ G C++ K+ A L GLE + + ++ C G + + ++ M
Sbjct: 536 TYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANM 595
Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
E + VTY +++G K A + MY +G+ PD I+YNTI++ C C+ +
Sbjct: 596 EHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGV 655
Query: 500 RKAFQLLNQMWLHNLEPTSATYNILI 525
A + + H + PT T+NIL+
Sbjct: 656 SYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 123/491 (25%), Positives = 235/491 (47%), Gaps = 7/491 (1%)
Query: 7 SRTGMVHDAVFVIAKMKELDLKVSIQTYNSL----LYNLRHTDIMWDLYDDI-KVSETPR 61
++ G + DA+ + +M E + + YN L L H M +L+D + + S
Sbjct: 195 AKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAM-ELWDRLLEDSSVYP 253
Query: 62 NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
NV T++I+I GL + R+ D + + E + + ++++ C G + A+ +F
Sbjct: 254 NVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVF 313
Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
+ + D +YN ++ G C G ++E+LE M H + ++Y+IL KG
Sbjct: 314 NELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM-EHKNSVNIVSYNILIKGLLEN 372
Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
+I A + + + KG D TY + I G C G V + L + + + S G L+V AY
Sbjct: 373 GKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAY 432
Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
+ ++ +CK R++EA L+ EM G++ + + LI GL + ++ +A EM
Sbjct: 433 ASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGK 492
Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
P ++ ++ GLC+ EA + ++ + D+ Y+I++ G + I
Sbjct: 493 NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDL 552
Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
A++L+ Q ++ + ++ N LI+G C GK+ DA ++ ++ + VTY T M
Sbjct: 553 ALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLME 612
Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
+ + G+ R + M + P ++Y ++KGLC + A++ +D G+ P
Sbjct: 613 GFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFP 672
Query: 482 DQITYNTIIRS 492
T+N ++R+
Sbjct: 673 TVYTWNILVRA 683
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 204/435 (46%), Gaps = 4/435 (0%)
Query: 30 SIQTYNSLLYNLR---HTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
+++T+N ++ L D +++ +K +E +++YT S +I GLC + A
Sbjct: 254 NVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVF 313
Query: 87 QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
E ++ VV+ N ++ +C+ G + + L+ +M ++ + SYNILI GL
Sbjct: 314 NELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM-EHKNSVNIVSYNILIKGLLEN 372
Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
G ++EA M G D TY I G + ++ A V+Q++ G D+ Y
Sbjct: 373 GKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAY 432
Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
+I C+ +EE L + M G +LN + L+ + + R+ EA L EM
Sbjct: 433 ASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGK 492
Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
G +P +V+Y+ILI GLCK K +A EM P+ + +L GLC I
Sbjct: 493 NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDL 552
Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
A + + S DV+++NI+I G +G + +A+ + + + + ++VT+N+L+
Sbjct: 553 ALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLME 612
Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
GF K G A + + GL+P ++Y T M C + + + I P
Sbjct: 613 GFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFP 672
Query: 447 THVTYTVVIKGLCKQ 461
T T+ ++++ + +
Sbjct: 673 TVYTWNILVRAVVNR 687
Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 185/434 (42%), Gaps = 55/434 (12%)
Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
++RE+ G + + +Y+ LL++ ++ + + L E G+ P+L TY++LI+
Sbjct: 103 RMREIF---GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMS 159
Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
CK+ + KA + M + P+ F++ ++ L + + +A FD + DV
Sbjct: 160 CKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDV 219
Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIE-KRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
YNI+IDG++K + A++L+ +L+E + P++ T N +I G K G+V D ++ +
Sbjct: 220 TCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWE 279
Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
+K + E TY++ +I GLC
Sbjct: 280 RMKQNEREKDLYTYSS-----------------------------------LIHGLCDAG 304
Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
+ +A + ++ + D +TYNT++ FC+C ++++ +L M H +YN
Sbjct: 305 NVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM-EHKNSVNIVSYN 363
Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
ILI GL NG + A + + + K Y I C G V+KA+ ++
Sbjct: 364 ILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 423
Query: 583 GFEISIRDYTKSFFCM---------------MLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
G + + Y C+ M +G + +C ++ + LG
Sbjct: 424 GGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA 483
Query: 628 FELAAVMIKSGLLP 641
M K+G P
Sbjct: 484 SFFLREMGKNGCRP 497
Score = 129 bits (324), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 167/355 (47%), Gaps = 10/355 (2%)
Query: 6 YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL------RHTDIMWDLYDDIKVSET 59
+ R G + +++ + ++ E V+I +YN L+ L ++W L +
Sbjct: 335 FCRCGKIKESL-ELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRL---MPAKGY 390
Query: 60 PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
+ T I I GLC + A+ +QE V + +I+ CK E A
Sbjct: 391 AADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASN 450
Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
L M K+G+ ++ N LI GL + EA F +MG++G P ++Y+IL G
Sbjct: 451 LVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLC 510
Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
+ A ++++L G PD+ TY++L+CG C+ ++ L+L L G + +V+
Sbjct: 511 KAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVM 570
Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
+++L+ +C G++D+A+ ++ ME +LVTY+ L+ G K ++A ++ M
Sbjct: 571 MHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYM 630
Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
+ P+ ++ I+ GLC ++ A +FD V +NI++ V
Sbjct: 631 YKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVV 685
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 94/225 (41%), Gaps = 16/225 (7%)
Query: 390 KNGKVADARRLLDTIKLH-GLEPSAVTYTTFMNAYCEE---GNIQRLLALLQEMETKAIG 445
KN + A A L D+ H G SAV Y + E ++ R++ L++ E K
Sbjct: 21 KNPRAAFA--LFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDE 78
Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMY-VIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
++ VIK K +A+ + + M + G P +YNT++ +F + K K
Sbjct: 79 DVALS---VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVES 135
Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
L + P TYN+LI C + + A L + + +Y+T+I
Sbjct: 136 LFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLA 195
Query: 565 AEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQE 609
G + A+ F +M E+G + Y +L +GF +++
Sbjct: 196 KAGKLDDALELFDEMSERGVAPDVTCYN------ILIDGFLKEKD 234
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 158/645 (24%), Positives = 288/645 (44%), Gaps = 65/645 (10%)
Query: 5 VYSRTGMVHDAVFVIAKMKEL-DLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETP 60
Y+ +G + AV + + EL D + NSLL L + + D +YD++
Sbjct: 143 AYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDS 202
Query: 61 RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
+ Y+ I++ G+C + +++ ++ GK P++V N I+ YCKLG E A +
Sbjct: 203 VDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLV 262
Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP-----DAITYSILA 175
F + G P ++ +I+G C G + +++ G+ + I +
Sbjct: 263 FKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYR 322
Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
G+ + S W ++ PD+ TY +LI C+ G E + + +G
Sbjct: 323 HGYKVDPAESIGW-----IIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLI 377
Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
N ++Y+ L+ + CKS D A LL +M G KPD+VTY ILI GL + A+ +
Sbjct: 378 PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNM 437
Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
++ + +SP++ + ++ GLC+ A++ F ++ N + D +Y +IDG+++
Sbjct: 438 KVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIR 497
Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
G+ EA +++ +EK + +V N++I GFC++G + +A ++ + L P T
Sbjct: 498 SGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFT 557
Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
Y+T ++ Y ++ ++ + + + ME P VTYT +I G C Q + A + ++M
Sbjct: 558 YSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQ 617
Query: 476 VIGVTPDQITYNTIIRSFCK-CKDLRKAFQLLNQMWLHNLEPTSATYNILIDG------- 527
+ + P+ +TY T+IRS K L KA M + P T+N L+ G
Sbjct: 618 LRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSG 677
Query: 528 ------------------------------------------LCVNGDLKNADCLLVSLQ 545
LCV+G +K A +
Sbjct: 678 KVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMV 737
Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTF-FCQMVEKGFEISIR 589
+ S V++ I+ C G+ + FC + EKG E+++R
Sbjct: 738 KKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVAVR 782
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 123/498 (24%), Positives = 222/498 (44%), Gaps = 37/498 (7%)
Query: 96 PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
P V++ N+++S K A+ ++ M G D +S IL+ G+C G +E +
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
G P+ + Y+ + G+ L I A+ V ++L +KG P + T+ +I G+C+
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG-RIDEALGLLYEMEAVGLKPDLV 274
G+ +L + +G +++V + ++ + + G ++D A + + + A KPD+
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWII-ANDCKPDVA 346
Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
TY+ILI LCK+ K A+ +E K + PN+ ++ ++ C+ +
Sbjct: 347 TYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKE----------- 395
Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
Y+I A +L Q+ E+ P IVT+ LI+G +G +
Sbjct: 396 -----------YDI-------------ASKLLLQMAERGCKPDIVTYGILIHGLVVSGHM 431
Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
DA + + G+ P A Y M+ C+ G L EM + I P Y +
Sbjct: 432 DDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATL 491
Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
I G + EA ++ GV D + +N +I+ FC+ L +A +N+M +L
Sbjct: 492 IDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHL 551
Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
P TY+ +IDG D+ A + ++++ V YT++I C +GD A
Sbjct: 552 VPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEE 611
Query: 575 FFCQMVEKGFEISIRDYT 592
F +M + ++ YT
Sbjct: 612 TFKEMQLRDLVPNVVTYT 629
Score = 162 bits (409), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 194/452 (42%), Gaps = 56/452 (12%)
Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL-YEMEAVGLKPDLVTYSILIRGLCKQD 287
+ ++ KL A S +L + +SG + +A+ + Y +E PD++ + L+ L K
Sbjct: 125 LRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSR 184
Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
++ A ++Y+EMC + S ++++ ++ G+C + + R + CI ++V YN
Sbjct: 185 RLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYN 244
Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
+I GY KLG+I A ++++L K P++ TF ++I GFCK G + RLL +K
Sbjct: 245 TIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKER 304
Query: 408 GL-----------------------------------EPSAVTYTTFMNAYCEEGNIQRL 432
GL +P TY +N C+EG +
Sbjct: 305 GLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVA 364
Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
+ L E K + P +++Y +I+ CK + A +LL M G PD +TY +I
Sbjct: 365 VGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHG 424
Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
+ A + ++ + P +A YN+L+ GLC G A L + + NI
Sbjct: 425 LVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPD 484
Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICE 612
Y T+I GD +A F VEKG ++ + +
Sbjct: 485 AYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHN-------------------- 524
Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
M+ F + G L M + L+PDKF
Sbjct: 525 AMIKGFCRSGMLDEALACMNRMNEEHLVPDKF 556
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/525 (23%), Positives = 229/525 (43%), Gaps = 108/525 (20%)
Query: 18 VIAKMKELDLKVSIQTYNSLL-YNLRH-------TDIMWDLYDDIKVSETPRNVYTNSIV 69
+++++KE L+VS+ N+++ RH I W + +D K +V T +I+
Sbjct: 297 LLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCK-----PDVATYNIL 351
Query: 70 IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGL 129
I+ LC++ + + A+ FL E + K P+ +S ++ YCK ++A L M + G
Sbjct: 352 INRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGC 411
Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
PD +Y ILIHGL ++G M++A+ + GV PDA Y++L G + A
Sbjct: 412 KPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKL 471
Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
+ ++L + PD Y LI G+ + G+ +E K+ + + +G K++V+ ++ ++ C
Sbjct: 472 LFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFC 531
Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
+SG +DEAL + M L PD TYS +I G KQ + AI+++ M + PN
Sbjct: 532 RSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVV 591
Query: 310 AHGAILLGLC------------------------------------EKEMITEARMYFDS 333
+ +++ G C E + +A Y++
Sbjct: 592 TYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWEL 651
Query: 334 LIMSNCIQDVVLYNIMIDGYVKL------------------------------------- 356
++ + C+ + V +N ++ G+VK
Sbjct: 652 MMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAA 711
Query: 357 ------------GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL-LDT 403
G + A ++++K SP V+F ++++GFC G R +
Sbjct: 712 AYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCN 771
Query: 404 IKLHGLEPSAVTYTTFMNAY------CEEGNIQRLLALLQEMETK 442
+ GLE AV Y+ + + CE I L A++++ +TK
Sbjct: 772 LGEKGLE-VAVRYSQVLEQHLPQPVICEASTI--LHAMVEKADTK 813
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 162/361 (44%), Gaps = 22/361 (6%)
Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLI-MSNCIQDVVLYNIMIDGYVKLGNIGE 361
+++ + +H +L E +++A +D ++ + + + DV+ N ++ VK +G+
Sbjct: 131 KLTHEALSH--VLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGD 188
Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
A ++Y ++ ++ S + L+ G C GKV R+L++ G P+ V Y T +
Sbjct: 189 ARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIG 248
Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
YC+ G+I+ + +E++ K PT T+ +I G CK+ + +LL ++ G+
Sbjct: 249 GYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRV 308
Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWL--HNLEPTSATYNILIDGLCVNGDLKNADC 539
N II + K + K + W+ ++ +P ATYNILI+ LC G + A
Sbjct: 309 SVWFLNNIIDA--KYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVG 366
Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY-------- 591
L + + ++Y +I+A+C + A QM E+G + I Y
Sbjct: 367 FLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLV 426
Query: 592 -------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
+ ++ G PD I +++ + G L + M+ +LPD +
Sbjct: 427 VSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAY 486
Query: 645 L 645
+
Sbjct: 487 V 487
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 128/322 (39%), Gaps = 60/322 (18%)
Query: 3 AFVYS-------RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDL---YD 52
A+VY+ R+G +A V + E +KV + +N+++ + ++ + +
Sbjct: 485 AYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMN 544
Query: 53 DIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG 112
+ + +T S +IDG +Q + AI + + P+VV+ ++++ +C G
Sbjct: 545 RMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQG 604
Query: 113 FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGS-MEEALEFTNDMGRHGVEPDAITY 171
++A+ F M L P+ +Y LI L S +E+A+ + M + P+ +T+
Sbjct: 605 DFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTF 664
Query: 172 SILAKGF--------------------HLLSQI-----SGAWK----------------- 189
+ L +GF L S+ S W
Sbjct: 665 NCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHG 724
Query: 190 -------VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
K++ KG PD V++ ++ G+C +GN ++ + L + + YS
Sbjct: 725 MVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVAVRYS 784
Query: 243 VLLSSMCKSGRIDEALGLLYEM 264
+L I EA +L+ M
Sbjct: 785 QVLEQHLPQPVICEASTILHAM 806
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 219 bits (559), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 128/456 (28%), Positives = 228/456 (50%), Gaps = 9/456 (1%)
Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ--- 192
Y ++I+ + S+ ++ + N+M +G P + ++ L S + W
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 193 -KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
K+++ D+ ++ +LI G C+ G +E+ L + GF NV+ Y+ L+ CK
Sbjct: 157 SKVVL-----DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKK 211
Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
G I++A L +EM +GL + TY++LI GL K + ++Y +M + PN + +
Sbjct: 212 GEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTY 271
Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
++ LC+ +A FD + ++V YN +I G + + EA ++ Q+
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKS 331
Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
I+P+++T+N+LI GFC GK+ A L +K GL PS VTY ++ +C +G+
Sbjct: 332 DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSG 391
Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
+++EME + I P+ VTYT++I + +++A+QL M +G+ PD TY+ +I
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIH 451
Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
FC + +A +L M N EP YN +I G C G A LL ++E ++
Sbjct: 452 GFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAP 511
Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
+Y +I+ C E +A +M++ G + S
Sbjct: 512 NVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547
Score = 219 bits (558), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 131/467 (28%), Positives = 241/467 (51%), Gaps = 4/467 (0%)
Query: 104 IMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG 163
I++ Y + ++ F M+ G P + +N L+ + + S + F N+ +
Sbjct: 100 IINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-NKSK 158
Query: 164 VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
V D ++ IL KG +I ++ ++ +L G P++V YT LI G C+ G +E+
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
L M G N Y+VL++ + K+G + + +M+ G+ P+L TY+ ++ L
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
CK + A Q+++EM + +S N + ++ GLC + + EA D + ++
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338
Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
+ YN +IDG+ +G +G+A+ L R L + +SPS+VT+N L+ GFC+ G + A +++
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
++ G++PS VTYT ++ + N+++ + L ME + P TY+V+I G C + +
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458
Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
+ EA +L + M P+++ YNT+I +CK +A +LL +M L P A+Y
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRY 518
Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
+I+ LC K A+ L+ + + I + + I + A+ D H
Sbjct: 519 MIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISR---AKNDSH 562
Score = 190 bits (482), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 201/400 (50%), Gaps = 1/400 (0%)
Query: 48 WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSR 107
W +++ K S+ +VY+ I+I G C+ ++ + L E F P+VV ++
Sbjct: 149 WSFFNENK-SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDG 207
Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
CK G E AK LF M K GL + +Y +LI+GL G ++ E M GV P+
Sbjct: 208 CCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPN 267
Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
TY+ + + A++V ++ +G +IVTY LI G C+ + E K+ +
Sbjct: 268 LYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVD 327
Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
M S G N+I Y+ L+ C G++ +AL L ++++ GL P LVTY+IL+ G C++
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387
Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
A ++ EM + I P+ + ++ + + +A S+ + DV Y+
Sbjct: 388 DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYS 447
Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
++I G+ G + EA +L++ ++EK P+ V +N++I G+CK G A +LL ++
Sbjct: 448 VLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEK 507
Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
L P+ +Y + C+E + L+++M I P+
Sbjct: 508 ELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 191/427 (44%), Gaps = 16/427 (3%)
Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
S+ K Y V+++S +S ++ ++ EM G P ++ L+ + +
Sbjct: 87 SETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFN 146
Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
+ +NE SK + + ++ G ++ G CE I ++ L +VV+Y +I
Sbjct: 147 QWWSFFNENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLI 205
Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
DG K G I +A L+ ++ + + + T+ LI G KNG + + ++ G+
Sbjct: 206 DGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVF 265
Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
P+ TY MN C++G + + EM + + VTY +I GLC++ KL EA ++
Sbjct: 266 PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKV 325
Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
++ M G+ P+ ITYNT+I FC L KA L + L P+ TYNIL+ G C
Sbjct: 326 VDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCR 385
Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
GD A ++ ++E I +KV YT +I ++ KA+ M E G +
Sbjct: 386 KGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHT 445
Query: 591 YT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMI 635
Y+ F M+ P++ I M++ + + G +L M
Sbjct: 446 YSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEME 505
Query: 636 KSGLLPD 642
+ L P+
Sbjct: 506 EKELAPN 512
Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 139/278 (50%), Gaps = 3/278 (1%)
Query: 8 RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSETPRNVY 64
+ G DA V +M+E + +I TYN+L+ L R + + D +K N+
Sbjct: 280 KDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLI 339
Query: 65 TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
T + +IDG C +L A+ ++ + PS+V+ N ++S +C+ G A + M
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399
Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
+ G+ P +Y ILI + +ME+A++ M G+ PD TYS+L GF + Q+
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQM 459
Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
+ A ++ + ++ K +P+ V Y +I GYC+ G+ LKL + M + NV +Y +
Sbjct: 460 NEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYM 519
Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
+ +CK + EA L+ +M G+ P S++ R
Sbjct: 520 IEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRA 557
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 5/176 (2%)
Query: 6 YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYD-DIKVSE---TPR 61
+ R G A ++ +M+E +K S TY L+ +D M + + E P
Sbjct: 383 FCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVP- 441
Query: 62 NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
+V+T S++I G C + ++ +A + K P+ V N ++ YCK G + A L
Sbjct: 442 DVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLL 501
Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
M + L P+ SY +I LC +EA M G++P S++++
Sbjct: 502 KEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRA 557
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 230,022,531
Number of Sequences: 539616
Number of extensions: 9374142
Number of successful extensions: 41301
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 26882
Number of HSP's gapped (non-prelim): 3709
length of query: 647
length of database: 191,569,459
effective HSP length: 124
effective length of query: 523
effective length of database: 124,657,075
effective search space: 65195650225
effective search space used: 65195650225
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 65 (29.6 bits)