Query 006397
Match_columns 647
No_of_seqs 614 out of 4012
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 23:58:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006397.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006397hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2h88_A Succinate dehydrogenase 100.0 4.6E-91 1.6E-95 780.2 51.9 535 85-642 15-602 (621)
2 1chu_A Protein (L-aspartate ox 100.0 1.9E-90 6.4E-95 768.6 51.1 519 86-628 6-532 (540)
3 2bs2_A Quinol-fumarate reducta 100.0 2E-90 6.9E-95 780.2 48.1 522 86-628 3-566 (660)
4 2wdq_A Succinate dehydrogenase 100.0 1.3E-88 4.6E-93 760.5 49.1 521 86-628 5-559 (588)
5 1kf6_A Fumarate reductase flav 100.0 7.5E-87 2.6E-91 747.6 53.0 522 86-628 3-554 (602)
6 3gyx_A Adenylylsulfate reducta 100.0 2.1E-84 7.3E-89 730.5 40.3 529 86-644 20-659 (662)
7 2e5v_A L-aspartate oxidase; ar 100.0 8.2E-77 2.8E-81 650.0 40.6 466 90-626 1-467 (472)
8 1jnr_A Adenylylsulfate reducta 100.0 2E-71 6.9E-76 628.4 41.3 523 85-645 19-639 (643)
9 1y0p_A Fumarate reductase flav 100.0 7.4E-52 2.5E-56 464.3 33.7 376 85-493 123-569 (571)
10 1d4d_A Flavocytochrome C fumar 100.0 4.6E-51 1.6E-55 456.8 35.1 375 86-493 124-570 (572)
11 1qo8_A Flavocytochrome C3 fuma 100.0 4.4E-50 1.5E-54 449.2 39.4 376 85-493 118-564 (566)
12 4at0_A 3-ketosteroid-delta4-5a 100.0 7.7E-48 2.6E-52 425.9 30.2 371 85-491 38-509 (510)
13 2i0z_A NAD(FAD)-utilizing dehy 100.0 6.1E-31 2.1E-35 285.9 24.5 355 86-493 24-444 (447)
14 2gqf_A Hypothetical protein HI 99.9 1.1E-22 3.8E-27 217.0 17.6 186 87-311 3-192 (401)
15 3v76_A Flavoprotein; structura 99.8 1.7E-20 5.7E-25 200.9 16.6 187 85-311 24-211 (417)
16 4fk1_A Putative thioredoxin re 99.7 3.2E-16 1.1E-20 161.0 17.6 49 437-493 252-300 (304)
17 3cp8_A TRNA uridine 5-carboxym 99.7 1.1E-15 3.8E-20 169.0 22.3 154 86-282 19-175 (641)
18 3nlc_A Uncharacterized protein 99.7 2.2E-15 7.7E-20 165.5 24.3 155 86-282 105-278 (549)
19 4b1b_A TRXR, thioredoxin reduc 99.7 3.9E-17 1.3E-21 179.7 6.6 36 86-121 40-76 (542)
20 4gcm_A TRXR, thioredoxin reduc 99.7 2.9E-16 1E-20 161.8 12.7 51 436-494 257-307 (312)
21 3qfa_A Thioredoxin reductase 1 99.6 6.8E-17 2.3E-21 178.4 4.8 157 86-283 30-187 (519)
22 4a5l_A Thioredoxin reductase; 99.6 7.9E-16 2.7E-20 158.5 8.9 51 436-494 263-313 (314)
23 3dgz_A Thioredoxin reductase 2 99.6 1.9E-15 6.4E-20 165.8 11.8 156 87-283 5-161 (488)
24 3urh_A Dihydrolipoyl dehydroge 99.6 2.1E-15 7.3E-20 165.5 10.9 39 86-124 23-62 (491)
25 3f8d_A Thioredoxin reductase ( 99.6 3.8E-16 1.3E-20 161.3 3.5 53 436-494 266-318 (323)
26 3lad_A Dihydrolipoamide dehydr 99.6 1.5E-15 5.1E-20 166.1 7.5 39 88-126 3-42 (476)
27 3lzw_A Ferredoxin--NADP reduct 99.6 5.2E-16 1.8E-20 161.0 3.6 54 435-494 263-316 (332)
28 3o0h_A Glutathione reductase; 99.6 2.1E-15 7.1E-20 165.2 8.4 35 87-121 25-60 (484)
29 1ojt_A Surface protein; redox- 99.6 4.6E-15 1.6E-19 162.4 10.9 39 86-124 4-43 (482)
30 2zxi_A TRNA uridine 5-carboxym 99.6 1.4E-13 4.7E-18 151.7 22.4 182 87-311 26-218 (637)
31 3dgh_A TRXR-1, thioredoxin red 99.6 1.3E-15 4.6E-20 166.7 4.8 155 87-283 8-164 (483)
32 3ces_A MNMG, tRNA uridine 5-ca 99.5 6.3E-13 2.2E-17 147.0 25.0 153 87-282 27-182 (651)
33 3ab1_A Ferredoxin--NADP reduct 99.5 9.6E-15 3.3E-19 153.6 9.6 118 87-281 13-131 (360)
34 3dk9_A Grase, GR, glutathione 99.5 1.5E-14 5.1E-19 158.2 9.7 36 86-121 18-54 (478)
35 3l8k_A Dihydrolipoyl dehydroge 99.5 5E-14 1.7E-18 153.5 13.6 37 88-124 4-41 (466)
36 2zbw_A Thioredoxin reductase; 99.5 2.4E-14 8.1E-19 148.9 10.3 53 436-494 266-318 (335)
37 2a8x_A Dihydrolipoyl dehydroge 99.5 2.8E-14 9.7E-19 155.4 10.4 33 88-120 3-36 (464)
38 2hqm_A GR, grase, glutathione 99.5 3.1E-14 1.1E-18 155.6 10.7 34 87-120 10-44 (479)
39 4dna_A Probable glutathione re 99.5 1.7E-14 5.7E-19 157.1 8.3 34 87-120 4-38 (463)
40 2wpf_A Trypanothione reductase 99.5 4E-14 1.4E-18 155.2 10.7 32 87-118 6-39 (495)
41 1dxl_A Dihydrolipoamide dehydr 99.5 1.1E-14 3.9E-19 158.9 6.0 38 87-124 5-43 (470)
42 2qae_A Lipoamide, dihydrolipoy 99.5 6E-14 2.1E-18 153.0 10.8 37 88-124 2-39 (468)
43 3oz2_A Digeranylgeranylglycero 99.5 2.4E-12 8.1E-17 136.5 22.8 147 87-282 3-163 (397)
44 4eqs_A Coenzyme A disulfide re 99.5 6.5E-14 2.2E-18 151.1 10.8 50 228-284 70-119 (437)
45 1fec_A Trypanothione reductase 99.5 6.4E-14 2.2E-18 153.5 10.4 46 436-490 305-350 (490)
46 4a9w_A Monooxygenase; baeyer-v 99.5 8.9E-14 3.1E-18 145.4 8.8 130 88-282 3-133 (357)
47 1ebd_A E3BD, dihydrolipoamide 99.4 1E-13 3.5E-18 150.6 9.4 33 88-120 3-36 (455)
48 3ics_A Coenzyme A-disulfide re 99.4 3E-13 1E-17 151.8 13.0 36 87-122 35-73 (588)
49 3itj_A Thioredoxin reductase 1 99.4 5.4E-14 1.8E-18 146.1 6.3 51 436-494 285-336 (338)
50 2r9z_A Glutathione amide reduc 99.4 4E-13 1.4E-17 146.1 13.2 33 88-120 4-37 (463)
51 3ic9_A Dihydrolipoamide dehydr 99.4 5.1E-15 1.7E-19 162.3 -2.7 35 86-120 6-41 (492)
52 1v59_A Dihydrolipoamide dehydr 99.4 2.2E-14 7.6E-19 156.9 1.9 37 87-123 4-41 (478)
53 3r9u_A Thioredoxin reductase; 99.4 1.2E-13 4.2E-18 141.9 7.3 51 436-494 263-313 (315)
54 1rp0_A ARA6, thiazole biosynth 99.4 2.1E-12 7.2E-17 131.0 16.3 144 87-282 38-192 (284)
55 3fbs_A Oxidoreductase; structu 99.4 1.4E-13 4.8E-18 140.1 7.5 49 437-494 244-293 (297)
56 3jsk_A Cypbp37 protein; octame 99.4 2.7E-12 9.3E-17 131.6 16.9 149 87-283 78-253 (344)
57 1ges_A Glutathione reductase; 99.4 2.2E-13 7.4E-18 147.7 9.2 33 88-120 4-37 (450)
58 2eq6_A Pyruvate dehydrogenase 99.4 3.3E-13 1.1E-17 146.8 10.6 33 88-120 6-39 (464)
59 1zmd_A Dihydrolipoyl dehydroge 99.4 4.1E-13 1.4E-17 146.6 11.4 38 87-124 5-43 (474)
60 3da1_A Glycerol-3-phosphate de 99.4 1.9E-12 6.6E-17 143.8 15.9 66 212-282 168-233 (561)
61 3iwa_A FAD-dependent pyridine 99.4 9E-13 3.1E-17 143.8 13.1 35 88-122 3-40 (472)
62 3kd9_A Coenzyme A disulfide re 99.4 7E-13 2.4E-17 143.7 11.8 35 88-122 3-40 (449)
63 1xdi_A RV3303C-LPDA; reductase 99.4 4E-13 1.4E-17 147.6 9.6 33 88-120 2-38 (499)
64 1mo9_A ORF3; nucleotide bindin 99.4 2.2E-12 7.7E-17 142.4 15.0 40 85-124 40-80 (523)
65 1onf_A GR, grase, glutathione 99.4 8.2E-14 2.8E-18 153.1 3.3 33 88-120 2-35 (500)
66 3klj_A NAD(FAD)-dependent dehy 99.4 8.9E-13 3E-17 139.6 10.1 49 437-490 245-293 (385)
67 3oc4_A Oxidoreductase, pyridin 99.4 1.1E-13 3.6E-18 150.3 3.0 35 89-123 3-40 (452)
68 3dme_A Conserved exported prot 99.4 1.7E-12 5.9E-17 136.3 11.9 182 88-282 4-210 (369)
69 2q7v_A Thioredoxin reductase; 99.4 3.2E-13 1.1E-17 139.8 5.9 52 436-495 263-314 (325)
70 3cty_A Thioredoxin reductase; 99.4 4.7E-11 1.6E-15 123.0 22.3 49 437-493 268-316 (319)
71 3fpz_A Thiazole biosynthetic e 99.4 1.5E-12 5.3E-17 134.8 11.0 55 437-493 271-325 (326)
72 3ntd_A FAD-dependent pyridine 99.4 2.4E-12 8.2E-17 143.8 12.8 34 89-122 2-38 (565)
73 2q0l_A TRXR, thioredoxin reduc 99.4 6.3E-13 2.2E-17 136.5 7.2 50 436-493 260-309 (311)
74 2x8g_A Thioredoxin glutathione 99.4 6.1E-13 2.1E-17 149.5 7.6 34 86-119 105-139 (598)
75 1fl2_A Alkyl hydroperoxide red 99.4 3.3E-13 1.1E-17 138.6 5.0 51 436-494 256-306 (310)
76 2cdu_A NADPH oxidase; flavoenz 99.4 2.6E-13 8.7E-18 147.3 4.3 33 89-121 1-36 (452)
77 1y56_B Sarcosine oxidase; dehy 99.3 1.3E-11 4.4E-16 130.6 16.5 180 87-282 4-206 (382)
78 2gag_A Heterotetrameric sarcos 99.3 9.3E-11 3.2E-15 138.1 25.2 38 87-124 127-165 (965)
79 2gag_B Heterotetrameric sarcos 99.3 2.5E-11 8.6E-16 129.3 18.1 182 85-281 18-230 (405)
80 1zk7_A HGII, reductase, mercur 99.3 2.1E-12 7.3E-17 140.6 9.9 34 88-121 4-38 (467)
81 2gjc_A Thiazole biosynthetic e 99.3 2.5E-11 8.6E-16 123.8 16.5 147 87-281 64-239 (326)
82 2rgh_A Alpha-glycerophosphate 99.3 1.8E-11 6.2E-16 136.2 16.8 183 87-282 31-251 (571)
83 3cgb_A Pyridine nucleotide-dis 99.3 6.5E-13 2.2E-17 145.1 5.0 34 89-122 37-73 (480)
84 3pvc_A TRNA 5-methylaminomethy 99.3 5.6E-11 1.9E-15 135.5 20.9 179 86-285 262-473 (689)
85 3atr_A Conserved archaeal prot 99.3 1.5E-11 5.3E-16 133.3 15.2 152 87-284 5-165 (453)
86 1xhc_A NADH oxidase /nitrite r 99.3 5.4E-12 1.9E-16 132.8 11.3 34 88-121 8-41 (367)
87 3ps9_A TRNA 5-methylaminomethy 99.3 4.1E-11 1.4E-15 136.5 19.4 177 87-285 271-477 (676)
88 1vdc_A NTR, NADPH dependent th 99.3 1.9E-12 6.5E-17 134.3 6.9 51 436-494 273-324 (333)
89 2ywl_A Thioredoxin reductase r 99.3 1.1E-10 3.9E-15 109.5 18.5 108 89-281 2-110 (180)
90 3lxd_A FAD-dependent pyridine 99.3 7.5E-12 2.6E-16 134.1 11.3 52 437-490 265-320 (415)
91 2qcu_A Aerobic glycerol-3-phos 99.3 2.1E-11 7.2E-16 133.9 15.1 180 88-282 3-211 (501)
92 2yqu_A 2-oxoglutarate dehydrog 99.3 1E-12 3.5E-17 142.6 4.5 37 88-124 1-38 (455)
93 1hyu_A AHPF, alkyl hydroperoxi 99.3 1.6E-12 5.4E-17 143.4 5.5 51 436-494 467-517 (521)
94 1lvl_A Dihydrolipoamide dehydr 99.3 7.5E-13 2.6E-17 143.8 2.5 34 87-120 4-38 (458)
95 1nhp_A NADH peroxidase; oxidor 99.3 1.3E-12 4.5E-17 141.5 4.4 33 89-121 1-36 (447)
96 1ryi_A Glycine oxidase; flavop 99.3 3.2E-11 1.1E-15 127.5 14.5 51 85-135 14-65 (382)
97 1y56_A Hypothetical protein PH 99.3 6.3E-11 2.2E-15 129.7 17.0 116 86-283 106-221 (493)
98 3qvp_A Glucose oxidase; oxidor 99.3 4.4E-11 1.5E-15 132.5 15.4 61 221-282 233-294 (583)
99 2v3a_A Rubredoxin reductase; a 99.3 1.2E-11 4.1E-16 131.1 10.4 33 88-120 4-39 (384)
100 3dje_A Fructosyl amine: oxygen 99.3 1.9E-10 6.5E-15 124.0 19.9 62 213-284 160-224 (438)
101 1trb_A Thioredoxin reductase; 99.2 1.2E-11 4.2E-16 127.3 9.9 51 436-494 260-315 (320)
102 3cgv_A Geranylgeranyl reductas 99.2 3.1E-11 1.1E-15 128.2 12.5 147 87-282 3-163 (397)
103 3nyc_A D-arginine dehydrogenas 99.2 1.6E-11 5.4E-16 129.7 10.0 180 85-282 6-210 (381)
104 3q9t_A Choline dehydrogenase a 99.2 4.3E-11 1.5E-15 132.6 12.5 54 225-281 216-270 (577)
105 3e1t_A Halogenase; flavoprotei 99.2 1.7E-10 5.7E-15 127.0 17.0 160 87-284 6-175 (512)
106 2a87_A TRXR, TR, thioredoxin r 99.2 1.1E-11 3.6E-16 128.9 6.8 51 436-494 266-317 (335)
107 2gf3_A MSOX, monomeric sarcosi 99.2 1.7E-10 5.7E-15 122.2 16.0 175 88-282 3-206 (389)
108 3axb_A Putative oxidoreductase 99.2 1.1E-10 3.9E-15 126.2 14.9 49 87-135 22-73 (448)
109 3ef6_A Toluene 1,2-dioxygenase 99.2 4E-11 1.4E-15 128.2 11.1 52 437-490 255-308 (410)
110 2oln_A NIKD protein; flavoprot 99.2 3.5E-10 1.2E-14 120.3 17.9 58 213-282 152-209 (397)
111 2bc0_A NADH oxidase; flavoprot 99.2 1.3E-11 4.4E-16 135.2 6.5 34 88-121 35-72 (490)
112 2gmh_A Electron transfer flavo 99.2 1.2E-10 4E-15 130.1 14.3 159 86-283 33-219 (584)
113 3nix_A Flavoprotein/dehydrogen 99.2 1.6E-10 5.6E-15 123.8 14.4 159 87-282 4-167 (421)
114 3fg2_P Putative rubredoxin red 99.2 6.2E-11 2.1E-15 126.5 11.0 53 437-490 255-309 (404)
115 2gqw_A Ferredoxin reductase; f 99.2 2.2E-10 7.4E-15 122.4 14.1 35 87-121 6-43 (408)
116 1q1r_A Putidaredoxin reductase 99.1 6.4E-11 2.2E-15 127.4 9.7 34 88-121 4-40 (431)
117 2uzz_A N-methyl-L-tryptophan o 99.1 4.4E-10 1.5E-14 118.3 15.4 177 88-284 2-207 (372)
118 3ihg_A RDME; flavoenzyme, anth 99.1 4.4E-10 1.5E-14 124.5 16.1 159 87-282 4-184 (535)
119 3fim_B ARYL-alcohol oxidase; A 99.1 6.5E-11 2.2E-15 130.8 9.1 59 219-281 212-276 (566)
120 3i3l_A Alkylhalidase CMLS; fla 99.1 3.6E-10 1.2E-14 125.9 14.9 156 87-282 22-189 (591)
121 3c4n_A Uncharacterized protein 99.1 1.4E-10 4.8E-15 123.7 8.8 45 87-131 35-82 (405)
122 1pj5_A N,N-dimethylglycine oxi 99.1 1.1E-09 3.8E-14 127.6 16.8 179 88-282 4-208 (830)
123 2vdc_G Glutamate synthase [NAD 99.1 9.2E-11 3.2E-15 126.7 7.0 49 437-494 396-445 (456)
124 2qa1_A PGAE, polyketide oxygen 99.0 3.1E-09 1.1E-13 116.4 17.0 150 84-282 7-166 (500)
125 3c96_A Flavin-containing monoo 99.0 2.4E-09 8.3E-14 114.3 14.4 157 88-283 4-171 (410)
126 3fmw_A Oxygenase; mithramycin, 99.0 2.4E-09 8.1E-14 119.0 14.7 155 87-282 48-208 (570)
127 2bry_A NEDD9 interacting prote 99.0 9.3E-10 3.2E-14 120.4 10.9 140 87-283 91-232 (497)
128 1k0i_A P-hydroxybenzoate hydro 99.0 6.7E-10 2.3E-14 118.0 9.0 64 213-283 102-165 (394)
129 2qa2_A CABE, polyketide oxygen 99.0 5.6E-09 1.9E-13 114.3 16.4 149 85-282 9-167 (499)
130 2r0c_A REBC; flavin adenine di 99.0 9E-09 3.1E-13 114.1 17.4 61 213-282 137-197 (549)
131 2cul_A Glucose-inhibited divis 99.0 6E-09 2.1E-13 102.0 13.7 123 88-282 3-126 (232)
132 2x3n_A Probable FAD-dependent 99.0 5.2E-09 1.8E-13 111.3 14.3 156 87-282 5-167 (399)
133 3t37_A Probable dehydrogenase; 98.9 2.1E-08 7.1E-13 110.7 18.8 57 220-282 216-272 (526)
134 4g6h_A Rotenone-insensitive NA 98.9 4.7E-09 1.6E-13 114.8 13.2 33 88-120 42-75 (502)
135 3h8l_A NADH oxidase; membrane 98.9 3.9E-09 1.3E-13 112.7 11.3 50 436-492 285-335 (409)
136 1gpe_A Protein (glucose oxidas 98.9 2.6E-08 8.9E-13 111.0 18.1 62 220-282 236-298 (587)
137 1c0p_A D-amino acid oxidase; a 98.9 6.2E-09 2.1E-13 109.2 12.0 38 87-124 5-43 (363)
138 3rp8_A Flavoprotein monooxygen 98.9 9.6E-09 3.3E-13 109.5 13.4 156 86-283 21-183 (407)
139 2weu_A Tryptophan 5-halogenase 98.9 1.1E-08 3.9E-13 112.4 14.3 62 213-284 172-233 (511)
140 3ka7_A Oxidoreductase; structu 98.9 4.1E-08 1.4E-12 105.1 18.1 57 214-281 196-252 (425)
141 3sx6_A Sulfide-quinone reducta 98.9 7.9E-09 2.7E-13 111.3 11.9 58 436-495 283-346 (437)
142 2aqj_A Tryptophan halogenase, 98.9 1.6E-08 5.5E-13 111.9 14.6 62 213-284 164-225 (538)
143 2vou_A 2,6-dihydroxypyridine h 98.9 1.7E-08 5.7E-13 107.3 14.0 146 87-282 4-154 (397)
144 2jbv_A Choline oxidase; alcoho 98.9 2E-08 7E-13 111.0 15.0 61 218-281 212-273 (546)
145 2e4g_A Tryptophan halogenase; 98.8 3E-08 1E-12 110.0 16.0 63 213-284 193-255 (550)
146 4dgk_A Phytoene dehydrogenase; 98.8 7.3E-08 2.5E-12 105.6 18.8 58 214-281 221-278 (501)
147 3alj_A 2-methyl-3-hydroxypyrid 98.8 1.1E-08 3.8E-13 107.9 11.4 146 87-282 10-161 (379)
148 1gte_A Dihydropyrimidine dehyd 98.8 3.5E-09 1.2E-13 125.6 8.0 48 437-493 460-508 (1025)
149 1m6i_A Programmed cell death p 98.8 1.3E-09 4.5E-14 119.2 4.0 36 86-121 9-47 (493)
150 2pyx_A Tryptophan halogenase; 98.8 4.1E-08 1.4E-12 108.3 15.9 63 213-284 174-236 (526)
151 2dkh_A 3-hydroxybenzoate hydro 98.8 2E-08 7E-13 113.3 13.5 69 213-283 140-213 (639)
152 3g3e_A D-amino-acid oxidase; F 98.8 2E-09 6.9E-14 112.3 4.5 46 90-135 2-54 (351)
153 1ju2_A HydroxynitrIle lyase; f 98.8 6.8E-09 2.3E-13 114.5 8.8 53 227-281 206-261 (536)
154 1kdg_A CDH, cellobiose dehydro 98.8 1.9E-08 6.6E-13 111.4 12.1 60 218-281 199-261 (546)
155 3h28_A Sulfide-quinone reducta 98.8 9E-09 3.1E-13 110.6 8.3 57 437-495 272-335 (430)
156 1yvv_A Amine oxidase, flavin-c 98.8 2.7E-08 9.2E-13 102.8 11.7 38 88-125 2-40 (336)
157 3pl8_A Pyranose 2-oxidase; sub 98.7 8.8E-08 3E-12 107.4 14.8 53 228-282 273-325 (623)
158 1n4w_A CHOD, cholesterol oxida 98.7 1E-07 3.6E-12 104.4 14.6 60 219-281 226-288 (504)
159 3nrn_A Uncharacterized protein 98.7 6.7E-07 2.3E-11 95.6 19.4 55 214-281 189-243 (421)
160 1pn0_A Phenol 2-monooxygenase; 98.7 9.1E-08 3.1E-12 108.2 13.0 35 87-121 7-47 (665)
161 2xve_A Flavin-containing monoo 98.7 2.4E-07 8.1E-12 100.4 15.4 65 213-281 100-166 (464)
162 2xdo_A TETX2 protein; tetracyc 98.6 8.2E-08 2.8E-12 101.9 11.2 36 87-122 25-61 (398)
163 4gde_A UDP-galactopyranose mut 98.6 5.2E-07 1.8E-11 99.0 17.3 41 86-126 8-50 (513)
164 3qj4_A Renalase; FAD/NAD(P)-bi 98.6 3.5E-07 1.2E-11 94.8 14.3 36 89-124 2-41 (342)
165 2gv8_A Monooxygenase; FMO, FAD 98.6 4E-07 1.4E-11 98.2 15.1 64 213-282 114-178 (447)
166 3s5w_A L-ornithine 5-monooxyge 98.6 5.1E-07 1.8E-11 97.8 16.0 37 87-123 29-71 (463)
167 3gwf_A Cyclohexanone monooxyge 98.6 1.3E-07 4.5E-12 104.2 11.4 135 87-281 7-147 (540)
168 4ap3_A Steroid monooxygenase; 98.6 1.3E-07 4.5E-12 104.4 11.3 136 87-281 20-159 (549)
169 1coy_A Cholesterol oxidase; ox 98.6 5E-07 1.7E-11 98.9 15.4 60 219-281 231-293 (507)
170 1w4x_A Phenylacetone monooxyge 98.5 3.1E-07 1.1E-11 101.5 12.5 38 87-124 15-53 (542)
171 4hb9_A Similarities with proba 98.5 3.1E-07 1E-11 97.5 12.0 34 89-122 2-36 (412)
172 3k7m_X 6-hydroxy-L-nicotine ox 98.5 5.8E-07 2E-11 96.3 14.2 39 89-127 2-41 (431)
173 3hyw_A Sulfide-quinone reducta 98.5 3.7E-07 1.3E-11 98.0 12.0 57 437-495 273-335 (430)
174 3p1w_A Rabgdi protein; GDI RAB 98.5 6.4E-07 2.2E-11 96.3 13.6 58 214-280 256-313 (475)
175 3d1c_A Flavin-containing putat 98.5 7E-07 2.4E-11 93.4 13.5 33 88-120 4-38 (369)
176 3uox_A Otemo; baeyer-villiger 98.5 2.3E-07 7.7E-12 102.5 9.7 38 87-124 8-46 (545)
177 3kkj_A Amine oxidase, flavin-c 98.5 6.7E-08 2.3E-12 95.9 4.8 38 88-125 2-40 (336)
178 3vrd_B FCCB subunit, flavocyto 98.5 2.9E-06 1E-10 89.9 16.8 54 436-495 271-326 (401)
179 1d5t_A Guanine nucleotide diss 98.4 3.7E-06 1.3E-10 90.1 15.0 58 214-282 234-291 (433)
180 4gut_A Lysine-specific histone 98.4 8.9E-06 3E-10 93.0 18.7 38 87-124 335-373 (776)
181 3nks_A Protoporphyrinogen oxid 98.4 1.6E-06 5.4E-11 94.2 11.9 39 89-127 3-44 (477)
182 3i6d_A Protoporphyrinogen oxid 98.3 2E-06 6.8E-11 93.1 11.0 38 88-125 5-49 (470)
183 3k30_A Histamine dehydrogenase 98.2 1.3E-05 4.4E-10 91.2 14.9 41 86-126 389-430 (690)
184 4b63_A L-ornithine N5 monooxyg 98.2 3.3E-05 1.1E-09 84.3 17.6 69 213-282 144-215 (501)
185 3lov_A Protoporphyrinogen oxid 98.2 5.3E-06 1.8E-10 90.0 10.6 37 88-124 4-43 (475)
186 1cjc_A Protein (adrenodoxin re 98.1 2.8E-05 9.6E-10 83.8 14.7 50 437-494 346-396 (460)
187 2bcg_G Secretory pathway GDP d 98.0 4.7E-06 1.6E-10 89.9 5.3 58 214-281 242-300 (453)
188 1trb_A Thioredoxin reductase; 97.9 6.6E-05 2.3E-09 76.5 12.7 100 89-281 146-247 (320)
189 1v59_A Dihydrolipoamide dehydr 97.8 0.00013 4.5E-09 79.1 14.2 102 89-280 184-286 (478)
190 3hdq_A UDP-galactopyranose mut 97.8 1.1E-05 3.6E-10 85.0 5.0 42 86-127 27-69 (397)
191 1fl2_A Alkyl hydroperoxide red 97.8 0.00015 5.2E-09 73.4 13.3 54 224-281 189-242 (310)
192 1v0j_A UDP-galactopyranose mut 97.8 1.1E-05 3.8E-10 85.4 4.6 41 87-127 6-48 (399)
193 2yg5_A Putrescine oxidase; oxi 97.8 1.3E-05 4.3E-10 86.4 5.1 40 87-126 4-44 (453)
194 3itj_A Thioredoxin reductase 1 97.8 0.00019 6.6E-09 73.5 13.2 97 89-281 174-271 (338)
195 1s3e_A Amine oxidase [flavin-c 97.7 1.7E-05 5.7E-10 87.2 5.1 39 88-126 4-43 (520)
196 2jae_A L-amino acid oxidase; o 97.7 1.6E-05 5.5E-10 86.5 5.0 40 87-126 10-50 (489)
197 1i8t_A UDP-galactopyranose mut 97.7 1.5E-05 5.3E-10 83.3 4.4 38 89-126 2-40 (367)
198 2e1m_A L-glutamate oxidase; L- 97.7 1.9E-05 6.5E-10 82.4 4.7 39 87-125 43-83 (376)
199 2ivd_A PPO, PPOX, protoporphyr 97.7 2E-05 7E-10 85.4 4.9 40 87-126 15-55 (478)
200 2eq6_A Pyruvate dehydrogenase 97.7 0.00019 6.6E-09 77.4 12.4 33 89-121 170-203 (464)
201 3cty_A Thioredoxin reductase; 97.7 0.00019 6.6E-09 73.1 11.7 50 228-281 203-252 (319)
202 2q7v_A Thioredoxin reductase; 97.7 0.0003 1E-08 71.9 13.2 51 226-281 199-249 (325)
203 3fg2_P Putative rubredoxin red 97.7 0.00025 8.7E-09 75.0 13.0 98 89-281 143-241 (404)
204 2q0l_A TRXR, thioredoxin reduc 97.7 0.00038 1.3E-08 70.5 13.8 50 228-281 192-241 (311)
205 3lxd_A FAD-dependent pyridine 97.7 0.00027 9.4E-09 75.0 13.2 98 89-281 153-251 (415)
206 1mo9_A ORF3; nucleotide bindin 97.7 0.00031 1.1E-08 77.1 13.7 101 89-281 215-316 (523)
207 1ebd_A E3BD, dihydrolipoamide 97.7 0.00032 1.1E-08 75.4 13.6 33 89-121 171-204 (455)
208 3ihm_A Styrene monooxygenase A 97.7 2.2E-05 7.4E-10 84.1 4.2 34 87-120 21-55 (430)
209 3s5w_A L-ornithine 5-monooxyge 97.7 0.00055 1.9E-08 73.7 15.4 148 88-281 227-377 (463)
210 1rsg_A FMS1 protein; FAD bindi 97.7 2.5E-05 8.7E-10 85.6 4.7 40 87-126 7-48 (516)
211 2zbw_A Thioredoxin reductase; 97.6 0.00045 1.5E-08 70.8 13.3 99 89-281 153-252 (335)
212 3ab1_A Ferredoxin--NADP reduct 97.6 0.00029 1E-08 73.1 11.9 52 437-494 278-329 (360)
213 2b9w_A Putative aminooxidase; 97.6 4.2E-05 1.4E-09 81.5 5.4 40 87-126 5-46 (424)
214 2vvm_A Monoamine oxidase N; FA 97.6 3.4E-05 1.2E-09 84.1 4.6 39 88-126 39-78 (495)
215 1nhp_A NADH peroxidase; oxidor 97.6 0.00027 9.3E-09 75.9 11.7 34 88-121 149-183 (447)
216 2yqu_A 2-oxoglutarate dehydrog 97.6 0.00028 9.6E-09 75.9 11.8 33 89-121 168-201 (455)
217 3dgz_A Thioredoxin reductase 2 97.6 0.00069 2.3E-08 73.6 14.8 98 89-278 186-284 (488)
218 3urh_A Dihydrolipoyl dehydroge 97.6 0.00036 1.2E-08 75.9 12.6 99 89-279 199-298 (491)
219 1zmd_A Dihydrolipoyl dehydroge 97.6 0.00047 1.6E-08 74.6 13.2 33 89-121 179-212 (474)
220 3dgh_A TRXR-1, thioredoxin red 97.6 0.00059 2E-08 74.0 13.8 99 89-279 188-287 (483)
221 2v3a_A Rubredoxin reductase; a 97.6 0.00055 1.9E-08 71.8 13.1 97 89-281 146-243 (384)
222 1sez_A Protoporphyrinogen oxid 97.6 4E-05 1.4E-09 83.7 4.5 39 87-125 12-51 (504)
223 3dk9_A Grase, GR, glutathione 97.5 0.00062 2.1E-08 73.7 13.7 102 89-280 188-292 (478)
224 1hyu_A AHPF, alkyl hydroperoxi 97.5 0.00047 1.6E-08 75.5 12.7 97 89-281 356-453 (521)
225 2hqm_A GR, grase, glutathione 97.5 0.00039 1.3E-08 75.3 11.7 33 89-121 186-219 (479)
226 4dsg_A UDP-galactopyranose mut 97.5 8.9E-05 3E-09 80.5 6.6 41 87-127 8-50 (484)
227 1vdc_A NTR, NADPH dependent th 97.5 0.00082 2.8E-08 68.7 13.5 53 228-282 208-260 (333)
228 3f8d_A Thioredoxin reductase ( 97.5 0.00077 2.6E-08 68.4 13.2 96 89-281 155-251 (323)
229 1ges_A Glutathione reductase; 97.5 0.00036 1.2E-08 74.9 11.1 32 89-120 168-200 (450)
230 2bi7_A UDP-galactopyranose mut 97.5 5.5E-05 1.9E-09 79.6 4.6 39 88-126 3-42 (384)
231 3c4a_A Probable tryptophan hyd 97.5 4.9E-05 1.7E-09 79.9 4.1 33 90-122 2-37 (381)
232 1q1r_A Putidaredoxin reductase 97.5 0.00054 1.8E-08 73.1 12.1 98 89-280 150-249 (431)
233 1dxl_A Dihydrolipoamide dehydr 97.5 0.00039 1.3E-08 75.1 11.2 33 89-121 178-211 (470)
234 3r9u_A Thioredoxin reductase; 97.5 0.00069 2.4E-08 68.5 12.4 49 228-281 196-244 (315)
235 2a8x_A Dihydrolipoyl dehydroge 97.4 0.00077 2.6E-08 72.6 12.6 32 89-120 172-204 (464)
236 3g5s_A Methylenetetrahydrofola 97.4 8.5E-05 2.9E-09 76.6 4.6 33 89-121 2-35 (443)
237 2iid_A L-amino-acid oxidase; f 97.4 7.2E-05 2.5E-09 81.5 4.4 39 87-125 32-71 (498)
238 3cgb_A Pyridine nucleotide-dis 97.4 0.00063 2.1E-08 73.7 11.8 32 89-120 187-219 (480)
239 2cdu_A NADPH oxidase; flavoenz 97.4 0.00068 2.3E-08 72.8 11.9 96 89-280 150-246 (452)
240 2r9z_A Glutathione amide reduc 97.4 0.00082 2.8E-08 72.4 12.5 32 89-120 167-199 (463)
241 1lvl_A Dihydrolipoamide dehydr 97.4 0.00044 1.5E-08 74.5 9.9 33 89-121 172-205 (458)
242 2qae_A Lipoamide, dihydrolipoy 97.4 0.0013 4.6E-08 70.8 13.6 33 89-121 175-208 (468)
243 1onf_A GR, grase, glutathione 97.3 0.0011 3.8E-08 72.1 12.4 98 89-281 177-275 (500)
244 2bc0_A NADH oxidase; flavoprot 97.3 0.00093 3.2E-08 72.6 11.5 33 89-121 195-228 (490)
245 1fec_A Trypanothione reductase 97.3 0.001 3.6E-08 72.2 11.8 98 89-282 188-289 (490)
246 2wpf_A Trypanothione reductase 97.3 0.0011 3.7E-08 72.1 11.9 45 437-490 310-354 (495)
247 2a87_A TRXR, TR, thioredoxin r 97.3 0.00069 2.4E-08 69.5 9.8 49 228-281 204-252 (335)
248 3ef6_A Toluene 1,2-dioxygenase 97.3 0.0005 1.7E-08 72.9 8.9 97 89-281 144-241 (410)
249 3lad_A Dihydrolipoamide dehydr 97.3 0.0022 7.7E-08 69.2 13.8 32 89-120 181-213 (476)
250 3ic9_A Dihydrolipoamide dehydr 97.3 0.002 6.9E-08 69.9 13.5 33 89-121 175-208 (492)
251 1xdi_A RV3303C-LPDA; reductase 97.3 0.0017 5.9E-08 70.6 12.9 33 89-121 183-216 (499)
252 3oc4_A Oxidoreductase, pyridin 97.2 0.0023 7.8E-08 68.7 13.3 95 89-280 148-243 (452)
253 3qfa_A Thioredoxin reductase 1 97.2 0.0035 1.2E-07 68.5 14.8 46 437-490 334-379 (519)
254 3iwa_A FAD-dependent pyridine 97.2 0.0017 5.7E-08 70.2 11.8 95 89-279 160-256 (472)
255 4dna_A Probable glutathione re 97.2 0.0018 6.3E-08 69.6 12.1 97 88-280 170-267 (463)
256 2gqw_A Ferredoxin reductase; f 97.2 0.0022 7.7E-08 67.8 12.4 33 89-121 146-179 (408)
257 1ojt_A Surface protein; redox- 97.2 0.0013 4.5E-08 71.2 10.8 33 89-121 186-219 (482)
258 1o94_A Tmadh, trimethylamine d 97.2 0.00025 8.5E-09 81.0 5.0 38 87-124 388-426 (729)
259 1ps9_A 2,4-dienoyl-COA reducta 97.1 0.0003 1E-08 79.7 5.3 38 87-124 372-410 (671)
260 3ntd_A FAD-dependent pyridine 97.1 0.0028 9.6E-08 70.0 13.1 31 90-120 153-184 (565)
261 1xhc_A NADH oxidase /nitrite r 97.1 0.0013 4.6E-08 68.4 9.9 33 89-121 144-177 (367)
262 3lzw_A Ferredoxin--NADP reduct 97.1 0.002 6.8E-08 65.6 11.0 49 228-281 202-250 (332)
263 1zk7_A HGII, reductase, mercur 97.1 0.0023 7.8E-08 69.0 11.7 32 89-120 177-209 (467)
264 2z3y_A Lysine-specific histone 97.1 0.00032 1.1E-08 79.2 4.9 39 86-124 105-144 (662)
265 1b37_A Protein (polyamine oxid 97.1 0.00035 1.2E-08 75.6 5.0 38 88-125 4-43 (472)
266 3o0h_A Glutathione reductase; 97.0 0.0028 9.5E-08 68.7 11.8 32 89-120 192-224 (484)
267 4a5l_A Thioredoxin reductase; 97.0 0.0053 1.8E-07 61.9 13.2 50 228-281 201-250 (314)
268 1lqt_A FPRA; NADP+ derivative, 97.0 0.00039 1.3E-08 74.7 4.6 51 436-494 337-388 (456)
269 2xag_A Lysine-specific histone 97.0 0.00044 1.5E-08 79.7 5.1 39 86-124 276-315 (852)
270 3ics_A Coenzyme A-disulfide re 96.9 0.0034 1.2E-07 69.8 11.7 32 89-120 188-220 (588)
271 4b1b_A TRXR, thioredoxin reduc 96.9 0.0058 2E-07 66.9 13.0 32 89-120 224-256 (542)
272 2x8g_A Thioredoxin glutathione 96.9 0.0069 2.4E-07 67.4 13.7 30 90-119 288-318 (598)
273 1m6i_A Programmed cell death p 96.8 0.0079 2.7E-07 65.2 12.6 52 218-280 230-281 (493)
274 4eqs_A Coenzyme A disulfide re 96.7 0.0037 1.3E-07 66.7 9.5 33 89-121 148-181 (437)
275 2vdc_G Glutamate synthase [NAD 96.7 0.0032 1.1E-07 67.5 8.3 33 88-120 264-298 (456)
276 3kd9_A Coenzyme A disulfide re 96.5 0.01 3.5E-07 63.4 11.3 32 89-120 149-181 (449)
277 3l8k_A Dihydrolipoyl dehydroge 96.5 0.0097 3.3E-07 64.0 11.1 32 89-120 173-205 (466)
278 1gte_A Dihydropyrimidine dehyd 96.5 0.011 3.8E-07 69.9 12.3 31 90-120 334-366 (1025)
279 4g6h_A Rotenone-insensitive NA 96.5 0.01 3.5E-07 64.4 11.2 48 437-491 351-399 (502)
280 1cjc_A Protein (adrenodoxin re 96.5 0.0015 5.3E-08 70.1 4.2 36 88-123 6-44 (460)
281 2gag_A Heterotetrameric sarcos 96.4 0.01 3.6E-07 69.7 11.1 51 228-281 329-383 (965)
282 3uox_A Otemo; baeyer-villiger 96.4 0.029 9.9E-07 61.5 13.9 34 88-121 185-219 (545)
283 1vg0_A RAB proteins geranylger 96.4 0.0025 8.6E-08 70.6 5.3 40 87-126 7-47 (650)
284 4gcm_A TRXR, thioredoxin reduc 96.2 0.054 1.8E-06 54.4 13.6 33 89-121 146-179 (312)
285 3gwf_A Cyclohexanone monooxyge 96.1 0.064 2.2E-06 58.7 14.6 34 88-121 178-212 (540)
286 3d1c_A Flavin-containing putat 95.9 0.047 1.6E-06 56.2 11.8 32 89-120 167-199 (369)
287 2lfc_A Fumarate reductase, fla 95.8 0.00094 3.2E-08 60.6 -1.6 52 337-396 7-61 (160)
288 3ayj_A Pro-enzyme of L-phenyla 95.6 0.005 1.7E-07 69.1 3.0 35 88-122 56-100 (721)
289 1o94_A Tmadh, trimethylamine d 95.5 0.018 6.3E-07 65.5 7.6 32 89-120 529-563 (729)
290 4ap3_A Steroid monooxygenase; 95.5 0.074 2.5E-06 58.3 12.2 34 88-121 191-225 (549)
291 1lqt_A FPRA; NADP+ derivative, 95.5 0.042 1.4E-06 58.8 10.0 50 228-282 265-327 (456)
292 1ps9_A 2,4-dienoyl-COA reducta 94.9 0.062 2.1E-06 60.5 9.4 51 219-281 578-628 (671)
293 3fbs_A Oxidoreductase; structu 94.9 0.045 1.5E-06 54.3 7.4 33 88-120 141-173 (297)
294 1w4x_A Phenylacetone monooxyge 93.9 0.48 1.6E-05 51.7 13.5 33 88-120 186-219 (542)
295 3fwz_A Inner membrane protein 93.0 0.1 3.5E-06 45.6 5.0 33 88-120 7-40 (140)
296 4fk1_A Putative thioredoxin re 92.4 0.33 1.1E-05 48.4 8.5 32 89-120 147-180 (304)
297 2g1u_A Hypothetical protein TM 92.2 0.12 4E-06 46.1 4.3 32 89-120 20-52 (155)
298 3sx6_A Sulfide-quinone reducta 92.1 0.61 2.1E-05 49.3 10.6 52 220-281 214-269 (437)
299 3h28_A Sulfide-quinone reducta 91.6 0.53 1.8E-05 49.6 9.5 52 219-281 205-256 (430)
300 3klj_A NAD(FAD)-dependent dehy 91.6 0.12 3.9E-06 54.0 4.2 33 89-121 147-180 (385)
301 3llv_A Exopolyphosphatase-rela 91.4 0.16 5.6E-06 44.2 4.3 32 89-120 7-39 (141)
302 4b63_A L-ornithine N5 monooxyg 90.4 2.6 8.9E-05 45.3 13.7 31 90-120 248-281 (501)
303 1lss_A TRK system potassium up 90.4 0.23 7.8E-06 42.9 4.3 32 89-120 5-37 (140)
304 3h8l_A NADH oxidase; membrane 90.0 0.88 3E-05 47.4 9.3 49 218-281 222-270 (409)
305 1id1_A Putative potassium chan 89.9 0.35 1.2E-05 42.8 5.1 31 89-119 4-35 (153)
306 3kkj_A Amine oxidase, flavin-c 89.6 0.2 6.8E-06 48.2 3.6 43 442-494 287-329 (336)
307 2cul_A Glucose-inhibited divis 89.2 0.25 8.7E-06 47.2 3.9 37 446-492 195-231 (232)
308 2hmt_A YUAA protein; RCK, KTN, 89.0 0.36 1.2E-05 41.8 4.5 31 90-120 8-39 (144)
309 2bcg_G Secretory pathway GDP d 88.2 0.73 2.5E-05 49.0 7.1 40 87-126 10-50 (453)
310 3g5s_A Methylenetetrahydrofola 88.0 0.33 1.1E-05 50.2 3.9 43 443-495 321-364 (443)
311 3ic5_A Putative saccharopine d 88.0 0.46 1.6E-05 39.5 4.4 32 89-120 6-39 (118)
312 3c85_A Putative glutathione-re 87.8 0.45 1.5E-05 43.5 4.5 32 89-120 40-73 (183)
313 3dfz_A SIRC, precorrin-2 dehyd 87.1 0.46 1.6E-05 45.1 4.1 32 88-119 31-63 (223)
314 2x5o_A UDP-N-acetylmuramoylala 87.0 0.62 2.1E-05 49.3 5.5 45 90-135 7-52 (439)
315 1kyq_A Met8P, siroheme biosynt 86.6 0.39 1.3E-05 47.1 3.4 32 89-120 14-46 (274)
316 3l4b_C TRKA K+ channel protien 86.3 0.53 1.8E-05 44.5 4.1 31 90-120 2-33 (218)
317 1jw9_B Molybdopterin biosynthe 86.1 0.46 1.6E-05 46.0 3.7 35 88-122 31-67 (249)
318 2xve_A Flavin-containing monoo 85.3 0.55 1.9E-05 50.1 4.1 32 89-120 198-230 (464)
319 3rui_A Ubiquitin-like modifier 85.2 0.73 2.5E-05 46.6 4.7 38 87-124 33-72 (340)
320 2gv8_A Monooxygenase; FMO, FAD 84.8 0.57 2E-05 49.6 3.9 33 88-120 212-246 (447)
321 3ado_A Lambda-crystallin; L-gu 84.6 0.62 2.1E-05 46.8 3.9 32 89-120 7-39 (319)
322 4dio_A NAD(P) transhydrogenase 84.6 0.65 2.2E-05 48.2 4.1 33 88-120 190-223 (405)
323 3h8v_A Ubiquitin-like modifier 84.5 0.68 2.3E-05 45.9 4.0 38 87-124 35-74 (292)
324 3p2y_A Alanine dehydrogenase/p 82.8 0.71 2.4E-05 47.5 3.5 33 88-120 184-217 (381)
325 3lk7_A UDP-N-acetylmuramoylala 82.7 0.74 2.5E-05 48.9 3.8 32 89-120 10-42 (451)
326 1pjc_A Protein (L-alanine dehy 82.0 1 3.5E-05 46.2 4.4 32 89-120 168-200 (361)
327 3i83_A 2-dehydropantoate 2-red 81.4 1 3.4E-05 45.4 4.0 32 89-120 3-35 (320)
328 3hn2_A 2-dehydropantoate 2-red 81.2 0.97 3.3E-05 45.3 3.8 32 89-120 3-35 (312)
329 2a9f_A Putative malic enzyme ( 81.1 1 3.5E-05 46.3 3.9 34 87-120 187-222 (398)
330 1zud_1 Adenylyltransferase THI 81.1 0.92 3.1E-05 44.0 3.4 35 88-122 28-64 (251)
331 1x13_A NAD(P) transhydrogenase 80.9 1 3.5E-05 47.0 3.9 33 88-120 172-205 (401)
332 1vl6_A Malate oxidoreductase; 80.7 1.1 3.7E-05 46.0 3.9 34 87-120 191-226 (388)
333 4e12_A Diketoreductase; oxidor 80.7 1.1 3.8E-05 44.2 4.0 31 90-120 6-37 (283)
334 3h5n_A MCCB protein; ubiquitin 80.5 1.2 3.9E-05 45.7 4.1 35 88-122 118-154 (353)
335 1f0y_A HCDH, L-3-hydroxyacyl-C 80.4 1.1 3.9E-05 44.5 4.0 31 90-120 17-48 (302)
336 4gsl_A Ubiquitin-like modifier 80.3 1.4 4.8E-05 48.0 4.8 39 87-125 325-365 (615)
337 3g17_A Similar to 2-dehydropan 80.3 1.3 4.5E-05 43.9 4.3 32 89-120 3-35 (294)
338 3vh1_A Ubiquitin-like modifier 80.1 1.3 4.5E-05 48.1 4.5 39 87-125 326-366 (598)
339 1nyt_A Shikimate 5-dehydrogena 79.9 1.2 4.2E-05 43.6 4.0 31 89-119 120-151 (271)
340 1pzg_A LDH, lactate dehydrogen 79.9 1.3 4.5E-05 44.8 4.3 32 89-120 10-43 (331)
341 1l7d_A Nicotinamide nucleotide 79.5 1.3 4.3E-05 46.0 4.1 33 88-120 172-205 (384)
342 3oj0_A Glutr, glutamyl-tRNA re 79.4 0.74 2.5E-05 40.2 1.9 31 89-119 22-53 (144)
343 3phh_A Shikimate dehydrogenase 79.1 1.4 4.9E-05 43.0 4.1 33 88-120 118-151 (269)
344 2vvm_A Monoamine oxidase N; FA 79.1 3.8 0.00013 43.7 7.9 57 214-281 255-312 (495)
345 3k96_A Glycerol-3-phosphate de 78.7 1.5 5.3E-05 44.8 4.4 32 88-119 29-61 (356)
346 2eez_A Alanine dehydrogenase; 78.7 1.5 5.3E-05 45.0 4.4 32 89-120 167-199 (369)
347 3l9w_A Glutathione-regulated p 78.4 1.6 5.3E-05 45.7 4.3 32 89-120 5-37 (413)
348 3k6j_A Protein F01G10.3, confi 78.4 1.5 5.1E-05 46.4 4.2 32 89-120 55-87 (460)
349 3ghy_A Ketopantoate reductase 78.2 1.6 5.5E-05 44.1 4.3 31 89-119 4-35 (335)
350 1ks9_A KPA reductase;, 2-dehyd 77.8 1.6 5.4E-05 42.9 4.1 31 90-120 2-33 (291)
351 2y0c_A BCEC, UDP-glucose dehyd 77.7 1.4 4.9E-05 47.0 3.9 33 88-120 8-41 (478)
352 2raf_A Putative dinucleotide-b 77.2 1.7 5.9E-05 40.6 3.9 32 89-120 20-52 (209)
353 1tt5_B Ubiquitin-activating en 77.2 2 6.9E-05 45.1 4.8 35 88-122 40-76 (434)
354 2dpo_A L-gulonate 3-dehydrogen 77.1 1.6 5.5E-05 43.9 3.9 32 89-120 7-39 (319)
355 4ffl_A PYLC; amino acid, biosy 77.1 1.9 6.4E-05 44.1 4.5 32 90-121 3-35 (363)
356 4a9w_A Monooxygenase; baeyer-v 76.8 1.4 4.9E-05 44.3 3.5 32 89-120 164-195 (357)
357 2vhw_A Alanine dehydrogenase; 76.7 1.9 6.5E-05 44.5 4.4 33 88-120 168-201 (377)
358 4g65_A TRK system potassium up 76.6 1.2 4E-05 47.5 2.8 32 89-120 4-36 (461)
359 3eag_A UDP-N-acetylmuramate:L- 76.5 1.8 6.2E-05 43.7 4.1 31 90-120 6-38 (326)
360 1vg0_A RAB proteins geranylger 76.5 4.6 0.00016 44.6 7.6 56 214-278 378-434 (650)
361 1y8q_A Ubiquitin-like 1 activa 76.4 1.9 6.6E-05 43.9 4.2 37 88-124 36-74 (346)
362 3vtf_A UDP-glucose 6-dehydroge 76.1 1.8 6E-05 45.6 3.9 33 88-120 21-54 (444)
363 1p77_A Shikimate 5-dehydrogena 76.0 1.5 5.3E-05 42.9 3.3 32 89-120 120-152 (272)
364 1pjq_A CYSG, siroheme synthase 75.3 2.1 7.2E-05 45.4 4.4 31 89-119 13-44 (457)
365 3ond_A Adenosylhomocysteinase; 75.2 1.7 5.8E-05 46.1 3.5 31 89-119 266-297 (488)
366 2ew2_A 2-dehydropantoate 2-red 75.1 2 6.8E-05 42.7 4.0 30 90-119 5-35 (316)
367 3tnl_A Shikimate dehydrogenase 74.7 2.4 8.4E-05 42.4 4.4 31 89-119 155-187 (315)
368 3jyo_A Quinate/shikimate dehyd 74.4 2.2 7.5E-05 42.1 4.0 31 89-119 128-160 (283)
369 3gg2_A Sugar dehydrogenase, UD 73.6 2.2 7.5E-05 45.2 4.0 31 90-120 4-35 (450)
370 3u62_A Shikimate dehydrogenase 73.5 3.2 0.00011 40.2 4.8 31 90-120 110-142 (253)
371 3don_A Shikimate dehydrogenase 73.3 2.4 8E-05 41.7 3.8 33 88-120 117-151 (277)
372 1rp0_A ARA6, thiazole biosynth 72.9 0.83 2.8E-05 45.1 0.5 48 445-494 229-276 (284)
373 3t4e_A Quinate/shikimate dehyd 72.9 2.9 9.9E-05 41.8 4.4 31 89-119 149-181 (312)
374 3ego_A Probable 2-dehydropanto 72.9 2.3 7.9E-05 42.4 3.8 31 89-120 3-34 (307)
375 1bg6_A N-(1-D-carboxylethyl)-L 72.8 2.4 8.1E-05 43.1 3.9 32 89-120 5-37 (359)
376 1guz_A Malate dehydrogenase; o 72.8 2.6 8.9E-05 42.1 4.1 31 90-120 2-35 (310)
377 1zcj_A Peroxisomal bifunctiona 72.6 2.2 7.7E-05 45.3 3.8 31 90-120 39-70 (463)
378 2egg_A AROE, shikimate 5-dehyd 72.6 2.4 8.2E-05 42.1 3.8 31 89-119 142-174 (297)
379 3doj_A AT3G25530, dehydrogenas 72.5 2.6 8.7E-05 42.1 4.0 32 89-120 22-54 (310)
380 4a7p_A UDP-glucose dehydrogena 72.1 2.6 8.8E-05 44.5 4.0 34 88-121 8-42 (446)
381 3hwr_A 2-dehydropantoate 2-red 72.1 2.8 9.5E-05 42.1 4.2 30 89-119 20-50 (318)
382 4dgk_A Phytoene dehydrogenase; 72.1 2 6.8E-05 46.0 3.3 38 89-126 2-40 (501)
383 2vns_A Metalloreductase steap3 71.8 3.9 0.00013 38.3 4.9 32 89-120 29-61 (215)
384 2hjr_A Malate dehydrogenase; m 71.7 2.8 9.6E-05 42.3 4.1 32 89-120 15-48 (328)
385 3pwz_A Shikimate dehydrogenase 71.6 2.9 9.8E-05 41.0 4.0 32 88-119 120-153 (272)
386 1lu9_A Methylene tetrahydromet 71.3 3.2 0.00011 40.8 4.4 31 89-119 120-152 (287)
387 3fbt_A Chorismate mutase and s 70.6 2.8 9.6E-05 41.2 3.7 32 88-119 122-155 (282)
388 1t2d_A LDH-P, L-lactate dehydr 70.5 3.1 0.00011 41.8 4.1 32 89-120 5-38 (322)
389 3o8q_A Shikimate 5-dehydrogena 70.4 3.4 0.00012 40.6 4.2 31 89-119 127-159 (281)
390 3tum_A Shikimate dehydrogenase 70.3 3.2 0.00011 40.5 4.0 31 89-119 126-158 (269)
391 2ewd_A Lactate dehydrogenase,; 70.3 2.9 0.0001 41.9 3.8 32 89-120 5-38 (317)
392 1lld_A L-lactate dehydrogenase 70.2 3 0.0001 41.7 4.0 31 89-119 8-41 (319)
393 1y8q_B Anthracycline-, ubiquit 70.2 3.1 0.00011 45.7 4.3 36 88-123 17-54 (640)
394 2v6b_A L-LDH, L-lactate dehydr 70.1 3.1 0.00011 41.4 4.0 30 90-119 2-34 (304)
395 1npy_A Hypothetical shikimate 69.7 3 0.0001 40.8 3.6 31 89-119 120-152 (271)
396 1y6j_A L-lactate dehydrogenase 69.6 3.4 0.00012 41.4 4.1 32 89-120 8-42 (318)
397 1jay_A Coenzyme F420H2:NADP+ o 69.6 3.7 0.00013 38.1 4.2 30 90-119 2-33 (212)
398 1zej_A HBD-9, 3-hydroxyacyl-CO 69.5 2.8 9.4E-05 41.6 3.4 32 88-120 12-44 (293)
399 3tl2_A Malate dehydrogenase; c 69.3 3.7 0.00013 41.1 4.3 32 88-119 8-41 (315)
400 1mv8_A GMD, GDP-mannose 6-dehy 69.3 2.5 8.6E-05 44.5 3.2 31 90-120 2-33 (436)
401 3d4o_A Dipicolinate synthase s 69.2 3.8 0.00013 40.5 4.4 32 88-119 155-187 (293)
402 2rir_A Dipicolinate synthase, 68.9 3.9 0.00013 40.6 4.4 32 88-119 157-189 (300)
403 1txg_A Glycerol-3-phosphate de 68.8 2.9 0.0001 42.0 3.5 29 90-118 2-31 (335)
404 2uyy_A N-PAC protein; long-cha 68.8 4.5 0.00015 40.3 4.8 32 89-120 31-63 (316)
405 3dtt_A NADP oxidoreductase; st 68.7 4.1 0.00014 39.0 4.4 33 88-120 19-52 (245)
406 3mog_A Probable 3-hydroxybutyr 68.3 3.7 0.00013 43.8 4.3 31 90-120 7-38 (483)
407 1ur5_A Malate dehydrogenase; o 68.2 3.8 0.00013 40.9 4.1 31 90-120 4-36 (309)
408 4huj_A Uncharacterized protein 67.9 3.1 0.00011 39.2 3.2 31 89-119 24-56 (220)
409 3pef_A 6-phosphogluconate dehy 67.9 3.6 0.00012 40.4 3.9 31 90-120 3-34 (287)
410 1z82_A Glycerol-3-phosphate de 67.8 3.6 0.00012 41.5 3.9 32 88-119 14-46 (335)
411 2hk9_A Shikimate dehydrogenase 67.7 3.4 0.00012 40.5 3.6 31 89-119 130-161 (275)
412 2o7s_A DHQ-SDH PR, bifunctiona 67.5 3.6 0.00012 44.5 4.0 31 89-119 365-396 (523)
413 3ew7_A LMO0794 protein; Q8Y8U8 67.4 4.8 0.00016 37.3 4.5 31 90-120 2-34 (221)
414 3gvp_A Adenosylhomocysteinase 66.8 3.4 0.00012 43.0 3.5 33 88-120 220-253 (435)
415 4gx0_A TRKA domain protein; me 66.5 4.9 0.00017 43.8 5.0 33 89-121 349-382 (565)
416 3e8x_A Putative NAD-dependent 66.4 4.7 0.00016 38.0 4.3 32 89-120 22-55 (236)
417 4e21_A 6-phosphogluconate dehy 66.3 4 0.00014 41.7 3.9 33 88-120 22-55 (358)
418 3ce6_A Adenosylhomocysteinase; 66.2 3.5 0.00012 44.0 3.5 32 89-120 275-307 (494)
419 3gvi_A Malate dehydrogenase; N 65.9 4.4 0.00015 40.7 4.1 33 88-120 7-41 (324)
420 3pid_A UDP-glucose 6-dehydroge 65.8 3.8 0.00013 42.9 3.7 31 89-120 37-68 (432)
421 3gpi_A NAD-dependent epimerase 65.7 5.8 0.0002 38.6 4.9 32 90-121 5-37 (286)
422 1leh_A Leucine dehydrogenase; 65.7 4.3 0.00015 41.5 4.0 30 89-118 174-204 (364)
423 1tt5_A APPBP1, amyloid protein 65.6 3.7 0.00013 44.3 3.6 35 87-121 31-67 (531)
424 3h2s_A Putative NADH-flavin re 65.5 5.2 0.00018 37.2 4.3 30 91-120 3-34 (224)
425 3qha_A Putative oxidoreductase 65.4 3.6 0.00012 40.7 3.3 33 89-121 16-49 (296)
426 3pqe_A L-LDH, L-lactate dehydr 65.4 4.1 0.00014 41.0 3.7 31 89-119 6-39 (326)
427 2pv7_A T-protein [includes: ch 65.3 4.7 0.00016 39.9 4.1 31 90-120 23-55 (298)
428 1hdo_A Biliverdin IX beta redu 65.3 5.2 0.00018 36.5 4.3 31 90-120 5-37 (206)
429 3g0o_A 3-hydroxyisobutyrate de 65.3 4.4 0.00015 40.2 4.0 32 89-120 8-40 (303)
430 1dlj_A UDP-glucose dehydrogena 65.0 3.7 0.00012 42.7 3.4 30 90-120 2-32 (402)
431 3pdu_A 3-hydroxyisobutyrate de 64.9 3.7 0.00013 40.4 3.2 31 90-120 3-34 (287)
432 1evy_A Glycerol-3-phosphate de 64.7 3.3 0.00011 42.3 3.0 30 90-119 17-47 (366)
433 3o38_A Short chain dehydrogena 64.6 3.7 0.00013 39.7 3.1 31 90-120 24-57 (266)
434 2d5c_A AROE, shikimate 5-dehyd 64.3 5.4 0.00019 38.6 4.3 30 90-119 118-148 (263)
435 2f1k_A Prephenate dehydrogenas 63.5 5.1 0.00017 39.0 4.0 30 90-119 2-32 (279)
436 2p4q_A 6-phosphogluconate dehy 63.4 5.7 0.0002 42.5 4.6 33 88-120 10-43 (497)
437 4eez_A Alcohol dehydrogenase 1 63.4 5.5 0.00019 40.2 4.4 30 90-119 166-197 (348)
438 3c7a_A Octopine dehydrogenase; 63.3 4 0.00014 42.4 3.3 28 90-117 4-33 (404)
439 3d0o_A L-LDH 1, L-lactate dehy 63.3 4.6 0.00016 40.5 3.6 30 89-118 7-39 (317)
440 3ius_A Uncharacterized conserv 63.0 5.4 0.00018 38.8 4.1 32 89-120 6-38 (286)
441 1edz_A 5,10-methylenetetrahydr 62.8 3.9 0.00013 40.9 2.9 32 88-119 177-210 (320)
442 3fi9_A Malate dehydrogenase; s 62.7 5.8 0.0002 40.1 4.3 30 89-118 9-42 (343)
443 4aj2_A L-lactate dehydrogenase 62.5 5.8 0.0002 39.9 4.2 31 88-118 19-52 (331)
444 3l6d_A Putative oxidoreductase 62.4 7.3 0.00025 38.7 4.9 32 89-120 10-42 (306)
445 2x0j_A Malate dehydrogenase; o 62.4 4.7 0.00016 39.8 3.4 30 90-119 2-34 (294)
446 2zyd_A 6-phosphogluconate dehy 61.9 6 0.0002 42.2 4.4 33 88-120 15-48 (480)
447 1pqw_A Polyketide synthase; ro 61.9 4.4 0.00015 37.1 3.0 30 90-119 41-72 (198)
448 3q2o_A Phosphoribosylaminoimid 61.8 6.3 0.00022 40.6 4.5 32 89-120 15-47 (389)
449 2dkn_A 3-alpha-hydroxysteroid 61.7 6.9 0.00024 37.1 4.5 30 91-120 4-35 (255)
450 1piw_A Hypothetical zinc-type 61.4 5.9 0.0002 40.3 4.2 32 89-120 181-213 (360)
451 3two_A Mannitol dehydrogenase; 61.3 5.8 0.0002 40.1 4.0 32 89-120 178-210 (348)
452 2wtb_A MFP2, fatty acid multif 61.3 5.5 0.00019 44.8 4.2 32 89-120 313-345 (725)
453 4dll_A 2-hydroxy-3-oxopropiona 61.1 4.6 0.00016 40.4 3.2 32 89-120 32-64 (320)
454 3orq_A N5-carboxyaminoimidazol 61.1 8.8 0.0003 39.3 5.4 33 89-121 13-46 (377)
455 1yqd_A Sinapyl alcohol dehydro 61.0 6.4 0.00022 40.2 4.3 32 89-120 189-221 (366)
456 1nvt_A Shikimate 5'-dehydrogen 60.8 5 0.00017 39.5 3.3 30 89-118 129-158 (287)
457 2i6t_A Ubiquitin-conjugating e 60.7 5.5 0.00019 39.6 3.6 32 89-120 15-49 (303)
458 1gpj_A Glutamyl-tRNA reductase 60.7 5.1 0.00018 41.6 3.6 31 89-119 168-200 (404)
459 2pgd_A 6-phosphogluconate dehy 60.5 6.8 0.00023 41.8 4.5 32 89-120 3-35 (482)
460 3vku_A L-LDH, L-lactate dehydr 60.5 5.5 0.00019 40.0 3.6 31 89-119 10-43 (326)
461 1ldn_A L-lactate dehydrogenase 60.4 5.5 0.00019 39.8 3.6 31 89-119 7-40 (316)
462 3ldh_A Lactate dehydrogenase; 60.4 7 0.00024 39.3 4.3 30 89-118 22-54 (330)
463 2nvu_B Maltose binding protein 60.3 5.8 0.0002 45.3 4.2 36 87-122 410-447 (805)
464 1uuf_A YAHK, zinc-type alcohol 60.2 6.7 0.00023 40.1 4.3 31 90-120 197-228 (369)
465 2h78_A Hibadh, 3-hydroxyisobut 60.1 5 0.00017 39.7 3.2 31 90-120 5-36 (302)
466 3nep_X Malate dehydrogenase; h 59.9 6 0.0002 39.5 3.7 31 90-120 2-35 (314)
467 3ojo_A CAP5O; rossmann fold, c 59.8 4.8 0.00016 42.1 3.1 32 89-120 12-44 (431)
468 2gf2_A Hibadh, 3-hydroxyisobut 59.8 6.1 0.00021 38.8 3.8 31 90-120 2-33 (296)
469 3ktd_A Prephenate dehydrogenas 59.8 7.2 0.00025 39.5 4.3 32 89-120 9-41 (341)
470 3c24_A Putative oxidoreductase 59.7 6.5 0.00022 38.5 4.0 30 90-119 13-44 (286)
471 1pgj_A 6PGDH, 6-PGDH, 6-phosph 59.7 6.9 0.00024 41.6 4.4 31 90-120 3-34 (478)
472 1oju_A MDH, malate dehydrogena 59.7 5.8 0.0002 39.2 3.6 30 90-119 2-34 (294)
473 1np3_A Ketol-acid reductoisome 59.6 7.5 0.00026 39.2 4.5 32 89-120 17-49 (338)
474 1ez4_A Lactate dehydrogenase; 59.6 6.4 0.00022 39.4 3.9 30 89-118 6-38 (318)
475 3uog_A Alcohol dehydrogenase; 59.6 7.2 0.00024 39.7 4.4 31 89-119 191-222 (363)
476 3k30_A Histamine dehydrogenase 59.4 5.2 0.00018 44.8 3.5 33 89-121 524-559 (690)
477 2cvz_A Dehydrogenase, 3-hydrox 59.4 5.6 0.00019 38.8 3.5 30 90-120 3-33 (289)
478 2cdc_A Glucose dehydrogenase g 59.3 6.2 0.00021 40.3 3.8 32 89-120 182-214 (366)
479 3n58_A Adenosylhomocysteinase; 59.0 5.8 0.0002 41.5 3.5 32 89-120 248-280 (464)
480 3hyw_A Sulfide-quinone reducta 58.7 16 0.00054 38.1 7.0 54 217-281 203-256 (430)
481 2pd4_A Enoyl-[acyl-carrier-pro 58.7 6.9 0.00024 38.0 4.0 31 90-120 8-42 (275)
482 1c1d_A L-phenylalanine dehydro 58.5 6.9 0.00024 39.7 3.9 31 88-118 175-206 (355)
483 3p7m_A Malate dehydrogenase; p 58.4 7.4 0.00025 39.0 4.1 32 89-120 6-39 (321)
484 1hyh_A L-hicdh, L-2-hydroxyiso 58.3 6.2 0.00021 39.2 3.6 30 90-119 3-35 (309)
485 2hcy_A Alcohol dehydrogenase 1 58.0 8.3 0.00028 38.9 4.5 32 89-120 171-204 (347)
486 1wdk_A Fatty oxidation complex 58.0 6.7 0.00023 44.1 4.1 32 89-120 315-347 (715)
487 4id9_A Short-chain dehydrogena 57.9 9.4 0.00032 38.2 4.9 34 88-121 19-54 (347)
488 1a5z_A L-lactate dehydrogenase 57.9 6.4 0.00022 39.4 3.6 30 90-119 2-34 (319)
489 2ivd_A PPO, PPOX, protoporphyr 57.8 8.6 0.00029 40.6 4.8 56 215-281 239-294 (478)
490 2qyt_A 2-dehydropantoate 2-red 57.8 6.2 0.00021 39.1 3.5 30 89-118 9-45 (317)
491 3r6d_A NAD-dependent epimerase 57.8 8.7 0.0003 35.6 4.4 30 91-120 8-40 (221)
492 1vpd_A Tartronate semialdehyde 57.7 5.8 0.0002 39.0 3.2 31 89-119 6-37 (299)
493 1b37_A Protein (polyamine oxid 57.6 11 0.00038 39.7 5.7 56 215-280 207-269 (472)
494 2d4a_B Malate dehydrogenase; a 57.5 7.7 0.00026 38.6 4.1 31 90-120 1-33 (308)
495 4gwg_A 6-phosphogluconate dehy 57.4 8.8 0.0003 40.8 4.7 32 89-120 5-37 (484)
496 2cf5_A Atccad5, CAD, cinnamyl 57.3 7.7 0.00026 39.4 4.1 32 89-120 182-214 (357)
497 2o3j_A UDP-glucose 6-dehydroge 57.2 5.1 0.00017 42.7 2.8 32 89-120 10-44 (481)
498 3zwc_A Peroxisomal bifunctiona 56.8 5.8 0.0002 44.6 3.3 32 89-120 317-349 (742)
499 1e3j_A NADP(H)-dependent ketos 56.7 8.6 0.00029 38.9 4.4 30 90-119 171-201 (352)
500 3s2e_A Zinc-containing alcohol 56.6 6.9 0.00024 39.4 3.6 31 89-119 168-199 (340)
No 1
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=100.00 E-value=4.6e-91 Score=780.24 Aligned_cols=535 Identities=33% Similarity=0.489 Sum_probs=457.7
Q ss_pred ccccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecC--CCCCHHHHHHHHHHhcCCCCCHH
Q 006397 85 SVKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLC--PSDSVESHMQDTIVAGAYLCDDE 161 (647)
Q Consensus 85 ~~~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~--~~d~~~~~~~~~~~~g~~~~~~~ 161 (647)
.+.++||||||||+|||+||+.|+++| +|+||||....+++|.+++||+++... ..|+++.++.|++..+.++++++
T Consensus 15 ~~~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l~d~~ 94 (621)
T 2h88_A 15 VDHEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQD 94 (621)
T ss_dssp EEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHH
T ss_pred ccccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCCCCHH
Confidence 346799999999999999999999999 999999998888899899999987654 35889999999999999999999
Q ss_pred HHHHHHHhhHHHHHHHHHcCCccccCCCCcccccccCCcccc--------ceeecCCCcHHHHHHHHHHHHHcCCCcEEE
Q 006397 162 TVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHH--------RIVHAADMTGREIERALLEAVVSDPNISVF 233 (647)
Q Consensus 162 ~~~~~~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~--------r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~ 233 (647)
.++.+++.+++.++||+.+|++|....+|.+....+++++.+ |+++..+.+|..+...|.+.+.+ .||+|+
T Consensus 95 ~v~~l~~~s~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~~-~gv~i~ 173 (621)
T 2h88_A 95 AIHYMTEQAPAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLR-YDTSYF 173 (621)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHTT-SCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcccCCCCceeccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHHh-CCCEEE
Confidence 999999999999999999999999888888777778888765 77777788899999999999987 599999
Q ss_pred cceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccccCCCCCCCCCCcchhHHHHHHcCCeeccccc
Q 006397 234 EHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEF 313 (647)
Q Consensus 234 ~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~~~~Gdg~~~a~~aGa~l~~~ef 313 (647)
+++.|++|+.+ ++ +|.||.+.+..+|+...|.|+.||+||||++.+|..++++..+||||+.||+++|+.+.+|||
T Consensus 174 ~~~~v~~Li~~-~g---~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~y~~~t~~~~~tGdG~~mA~raGa~l~~me~ 249 (621)
T 2h88_A 174 VEYFALDLLME-NG---ECRGVIALCIEDGTIHRFRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEF 249 (621)
T ss_dssp ETEEEEEEEEE-TT---EEEEEEEEETTTCCEEEEEEEEEEECCCCCGGGSSSBSSCTTCCCHHHHHHHHTTCCEECTTC
T ss_pred EceEEEEEEEE-CC---EEEEEEEEEcCCCcEEEEEcCeEEECCCccccccCCcCCCCCCChHHHHHHHHcCCCcccCcc
Confidence 99999999986 56 899999987667887889999999999999999999999999999999999999999999999
Q ss_pred ccccceeccCCCCCCCCCCCCCccceeeecccCCCcEEEeCCCCccccccccc-cccCchhHHHHHHHHHHHhcCC----
Q 006397 314 VQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDER-AELAPRDVVARSIDDQLKKRNE---- 388 (647)
Q Consensus 314 ~q~~p~~~~~~g~~~~p~~~~~~~~l~~e~~~~~g~~~vn~~G~rf~~~y~~~-~~l~~rd~~~~~i~~~~~~~~~---- 388 (647)
+||||+.+... .++++|+++++|++++|.+|+|||++|.|. .++++||+++++|..++.++++
T Consensus 250 ~q~hPt~~~~~------------~~l~se~~rg~g~ilvn~~G~RF~~~y~p~~~ela~rdvv~rai~~e~~~g~g~~~~ 317 (621)
T 2h88_A 250 VQFHPTGIYGA------------GCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTIEIREGRGCGPE 317 (621)
T ss_dssp EEEEEEEETTT------------CCBCCTHHHHTTCEEECTTCCCTHHHHSTTTGGGSCHHHHHHHHHHHHHTTCCBTTT
T ss_pred eeeecccccCC------------cceecccccCCccEEECCCCCCcccccCcccccccchHHHHHHHHHHHHhcCCcccC
Confidence 99999987642 467889999999999999999999999876 4899999999999998877542
Q ss_pred -ceEEEeCCCCChhHHHhhChhHHHHHHHc-CCCCCCCcEEEeeeeceecceeEeCCCCc---------ccccCcccccc
Q 006397 389 -KYVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVPAAHYMCGGVRAGLQGE---------TNVRGLYVAGE 457 (647)
Q Consensus 389 -~~v~lD~~~~~~~~~~~~~~~~~~~~~~~-G~d~~~~~i~v~p~~~~~~GGi~vD~~~~---------T~ipGLyAaGe 457 (647)
..||+|+++++.+.+.+++|.+.+.+..+ |+|+.++|++|.|..||+||||+||.++| |+|||||||||
T Consensus 318 ~~~v~ld~~~l~~~~l~~~~~~i~~~~~~~~G~D~~~~pi~v~p~~h~tmGGi~~d~~~~Vl~~~~~~~t~IpGLyAaGE 397 (621)
T 2h88_A 318 KDHVYLQLHHLPPQQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVITHVNGEDKVVPGLYACGE 397 (621)
T ss_dssp TCBEEEECTTSCHHHHHHHCHHHHHHHHHHHCCCTTTSCEEEEEEEEEESCBEEBCTTSEEEEEETTEEEEEEEEEECGG
T ss_pred CCeEEEEcccCCHHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEeecccccCcEeECCCCeEeecccCCCcccCceEEccc
Confidence 45999999999999999999999998886 99999999999999999999999999987 79999999999
Q ss_pred cccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhhcccccccccccccccccCcccccccch-----hhhhcHHHHHHH
Q 006397 458 VACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMH-----NILRRTKEVRKE 532 (647)
Q Consensus 458 ~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 532 (647)
|+|+|+||+|||+||||++|+|||++||++|+++++.... ... ...... .....+++ +....+.+++.+
T Consensus 398 ~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~~~~~~-~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (621)
T 2h88_A 398 AASASVHGANRLGANSLLDLVVFGRACALTIAETCKPGEP-VPS---IKPNAG--EESVANLDKLRFADGTIRTSEARLN 471 (621)
T ss_dssp GEECSSSTTSCCTTSHHHHHHHHHHHHHHHHHHHCCTTCC-CCC---CCTTTT--HHHHHHHHHHHTCBSSEEHHHHHHH
T ss_pred cccccccCCCCCchHhHHHHHHHHHHHHHHHHHhhhcccc-ccc---cchhHH--HHHHHHHHHhhccCCCCCHHHHHHH
Confidence 9988999999999999999999999999999988642210 000 000000 00000010 112457889999
Q ss_pred HHHHHHhcCccccCHHHHHHHHHHHHHHHHHHHHhhhcc-CcccccchHHHHHHHHHHHHHHHHHHHHHhcccCcccccc
Q 006397 533 LQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEH-GWEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYM 611 (647)
Q Consensus 533 l~~~m~~~~g~~r~~~~L~~al~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~e~~~~l~~a~~~~~aal~R~ESRG~h~R 611 (647)
||++||+|+||+|++++|++|+++|++|++++.++.... ....++++.+++|++||+++|+++++|||.|+||||+|||
T Consensus 472 l~~~m~~~~gi~R~~~~L~~a~~~l~~l~~~~~~~~~~~~~~~~n~~l~~~~e~~~~l~~a~~~~~~al~R~ESRG~H~R 551 (621)
T 2h88_A 472 MQKTMQSHAAVFRTGSILQEGCEKLSQIYRDLAHLKTFDRGIVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAR 551 (621)
T ss_dssp HHHHHHHHSSSSBCHHHHHHHHHHHHHHHHGGGGEECCCCCSTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCSCBTTBCB
T ss_pred HHHHhhhceeEecCHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHhCcccccceec
Confidence 999999999999999999999999999998875432211 1223678899999999999999999999999999999999
Q ss_pred cCCCCCccC-----------------CCCCeeec-C--CCccccccccccc
Q 006397 612 VDFPHVEEN-----------------KRLPTIIL-P--SLVNCTWSSRQLH 642 (647)
Q Consensus 612 ~D~P~~~~~-----------------~~~~~~~~-~--~~~~~~~~~~~~~ 642 (647)
+|||++||+ +|+++++. . ++.+......|++
T Consensus 552 ~D~p~~dd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 602 (621)
T 2h88_A 552 EDYKLRIDEFDYSKPLQGQQKRPFEEHWRKHTLSYVDVKSGKVTLKYRPVI 602 (621)
T ss_dssp TTBCSCCCSSCTTSCCTTCCCCCGGGCCCEEEEEEEETTTTEEEEEEEECC
T ss_pred ccCcccCccccccCCcccccCCcchhccceeEEEEEcCCCCceEEEecccc
Confidence 999999998 78766553 2 2234444556666
No 2
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=100.00 E-value=1.9e-90 Score=768.56 Aligned_cols=519 Identities=43% Similarity=0.680 Sum_probs=407.7
Q ss_pred cccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHH
Q 006397 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVR 164 (647)
Q Consensus 86 ~~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~ 164 (647)
+.++||||||||+|||+||+.|++ | +|+||||....+|+|.+++||++...++.|+++.|+.+++..+.++++++.++
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~ds~~~~~~d~l~~g~g~~d~~~v~ 84 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAVE 84 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-------------CCSHHHHHHHHHHHHHHTTTCCCHHHHH
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCChhhcCCCEEEecCCCCCHHHHHHHHHHhhcccCCHHHHH
Confidence 457999999999999999999999 9 99999999988899999999999888777889999999999999999999999
Q ss_pred HHHHhhHHHHHHHHHcCCccccCC----CCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEE
Q 006397 165 VVCTEGPDRIRELIAIGASFDRGE----DGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAID 240 (647)
Q Consensus 165 ~~~~~~~~~~~~l~~~G~~~~~~~----~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~ 240 (647)
.+++.+++.++|+.++|++|.... ++.+....+++++.+++++..+.+|..+...|.+.+++..||+|++++.|++
T Consensus 85 ~~~~~~~~~i~~l~~~Gv~f~~~~~~~~~g~~~~~~~gg~~~~r~~~~~d~~g~~l~~~L~~~~~~~~gv~i~~~~~v~~ 164 (540)
T 1chu_A 85 FVASNARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSHRRILHAADATGREVETTLVSKALNHPNIRVLERTNAVD 164 (540)
T ss_dssp HHHHHHHHHHHHHHHTTCC--------------------------------------CCCHHHHHHCTTEEEECSEEEEE
T ss_pred HHHHhHHHHHHHHHHcCCCcccCcccCcCCccccccccccccCeEEEeCCCCHHHHHHHHHHHHHcCCCCEEEeCcEEEE
Confidence 999999999999999999998766 6767677788888888888777788889999999998755999999999999
Q ss_pred EEecCCCC---CceEEEEEEEecCCCeEEEEEcCeEEECCCcccccCCCCCCCCCCcchhHHHHHHcCCeeccccccccc
Q 006397 241 LLTTLDGP---DAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFH 317 (647)
Q Consensus 241 l~~~~~g~---~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~~~~Gdg~~~a~~aGa~l~~~ef~q~~ 317 (647)
|+.++++. ..+|.||.+.+..+|+...|.|+.||+|||+++.+|..+++++.+||||+.||+++|+.+.+|||+|||
T Consensus 165 L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~~~tGdG~~ma~~aGa~l~~~e~~q~h 244 (540)
T 1chu_A 165 LIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVANLEFNQFH 244 (540)
T ss_dssp EEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGGGSSSBSCGGGCSCHHHHHHHHTTCCEECTTCEEEE
T ss_pred EEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcccccCCCcCCCCCchHHHHHHHHcCCCCcChHHHhhc
Confidence 99842220 016899999876678877899999999999999999999999999999999999999999999999999
Q ss_pred ceeccCCCCCCCCCCCCCccceeeecccCCCcEEEeCCCCccccccccccccCchhHHHHHHHHHHHhcCCceEEEeCCC
Q 006397 318 PTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDDQLKKRNEKYVLLDISH 397 (647)
Q Consensus 318 p~~~~~~g~~~~p~~~~~~~~l~~e~~~~~g~~~vn~~G~rf~~~y~~~~~l~~rd~~~~~i~~~~~~~~~~~v~lD~~~ 397 (647)
|+.+..++. ..++++++++++|++++|.+|+|||++|++..+++|||+++++|..++.+++..++|+|+++
T Consensus 245 pt~~~~~~~---------~~~l~~e~~rg~g~~lvn~~G~RF~~~~~~~~el~~rd~v~~ai~~~~~~~~~~~v~ld~~~ 315 (540)
T 1chu_A 245 PTALYHPQA---------RNFLLTEALRGEGAYLKRPDGTRFMPDFDERGELAPRDIVARAIDHEMKRLGADCMFLDISH 315 (540)
T ss_dssp EEEECSTTC---------TTCBCCHHHHHTTCEEECTTSCBCGGGTCTTGGGSCHHHHHHHHHHHHHHHTCSCEEEECCS
T ss_pred CeeecCCCC---------CcceeehhhcCCceEEECCCCCCCcccCCcccccCcHHHHHHHHHHHHHhcCCceEEEeccc
Confidence 998865331 15788999999999999999999999999999999999999999999887655689999999
Q ss_pred CChhHHHhhChhHHHHHHHcCCCCCCCcEEEeeeeceecceeEeCCCCcccccCcccccccccCCCCCCCccCchhhHHH
Q 006397 398 KPTEKILSHFPNIAAECLKYGLDITSQPIPVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEA 477 (647)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~G~d~~~~~i~v~p~~~~~~GGi~vD~~~~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a 477 (647)
.+.+.+..++|++.+++.+.|+||.++|++|.|.+||+||||+||.+++|+||||||||||+|+|+||+||++||||++|
T Consensus 316 ~~~~~~~~~~~~i~~~~~~~Gid~~~~~i~v~p~~h~t~GGi~vd~~~~t~I~GLyAaGE~a~~g~hGanrl~gnsl~~~ 395 (540)
T 1chu_A 316 KPADFIRQHFPMIYEKLLGLGIDLTQEPVPIVPAAHYTCGGVMVDDHGRTDVEGLYAIGEVSYTGLHGANRMASNSLLEC 395 (540)
T ss_dssp SCSHHHHHHCHHHHHHHHTTTCCTTTSCEEEEEEEEEESCEEECCTTCBCSSBTEEECGGGEECSSSTTSCCTTHHHHHH
T ss_pred CCHHHHHHhhhhHHHHHHHhCcCCCCCCeEeehHHheecCcEEECCCCCCccCCEEeccccccccccCCCcCcchhHHHH
Confidence 99888999999999999999999999999999999999999999999999999999999999899999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcccccccccccccccccCcccccccchhhhhcHHHHHHHHHHHHHhcCccccCHHHHHHHHHHH
Q 006397 478 LVFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRI 557 (647)
Q Consensus 478 ~v~G~~Ag~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m~~~~g~~r~~~~L~~al~~l 557 (647)
+|||++||++|++++..... ......+... .... ......+.+++++||++||+|+||+|++++|++|+++|
T Consensus 396 ~vfG~~Ag~~aa~~~~~~~~-~~~~~~~~~~----~~~~---~~~~~~~~~~~~~l~~~m~~~~gi~R~~~~L~~a~~~l 467 (540)
T 1chu_A 396 LVYGWSAAEDITRRMPYAHD-ISTLPPWDES----RVEN---PDERVVIQHNWHELRLFMWDYVGIVRTTKRLERALRRI 467 (540)
T ss_dssp HHHHHHHHHHHHHHC---CC-CCCBCCCCCC----CBCC---HHHHHHHHHHHHHHHHHHHHHSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccc-cccchhhhhh----cccC---cccccchHHHHHHHHHHHHHhhCcccCHHHHHHHHHHH
Confidence 99999999999887532110 0000011110 0000 01112356788999999999999999999999999999
Q ss_pred HHHHHHHHHhhhccCcccccchHHHHHHHHHHHHHHHHHHHHHhcccCcccccccCCCCCccCCCCCeeec
Q 006397 558 DELEAEWETYLFEHGWEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFPHVEENKRLPTIIL 628 (647)
Q Consensus 558 ~~l~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~a~~~~~aal~R~ESRG~h~R~D~P~~~~~~~~~~~~~ 628 (647)
++|++++.....+. ....+++|++||+++|+++++|||.|+||||+|||+|||++|++ |.++++.
T Consensus 468 ~~l~~~~~~~~~~~-----~~~~~~~e~~~~~~~a~~~~~~al~R~ESRG~h~r~D~p~~~~~-~~~~~~~ 532 (540)
T 1chu_A 468 TMLQQEIDEYYAHF-----RVSNNLLELRNLVQVAELIVRCAMMRKESRGLHFTLDYPELLTH-SGPSILS 532 (540)
T ss_dssp HHHHHHHHHHHTTB-----CCCHHHHHHHHHHHHHHHHHHHHHHCCSCBTTBCBTTCCSCCSS-CCCCEEC
T ss_pred HHHHHHHHHHhhcc-----cccHHHHHHHHHHHHHHHHHHHHHhCCCcceeeecccCCCcChh-hhceEEc
Confidence 99988776533111 11245789999999999999999999999999999999999987 5555554
No 3
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=100.00 E-value=2e-90 Score=780.21 Aligned_cols=522 Identities=33% Similarity=0.490 Sum_probs=451.0
Q ss_pred cccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCC-----CCCHHHHHHHHHHhcCCCCC
Q 006397 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCP-----SDSVESHMQDTIVAGAYLCD 159 (647)
Q Consensus 86 ~~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~-----~d~~~~~~~~~~~~g~~~~~ 159 (647)
+.++||||||||+|||+||+.|+++| +|+||||....+|+|.+++||+.+.... .|+++.++.+++..+.++++
T Consensus 3 ~~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~g~~ds~~~~~~dt~~~g~~~~d 82 (660)
T 2bs2_A 3 VQYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGMQASLGNSKMSDGDNEDLHFMDTVKGSDWGCD 82 (660)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGGSGGGGCCSCEECCCCCSGGGTTCCHHHHHHHHHHHTTTCSC
T ss_pred cccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCCCCcccccCCCeEeccCCcccCCCCCHHHHHHHHHHhcCCCCC
Confidence 45789999999999999999999999 9999999998889999999999877654 68899999999999999999
Q ss_pred HHHHHHHHHhhHHHHHHHHHcCCccccCCCCc---------------------ccccccCCccccceeecCCCcHHHHHH
Q 006397 160 DETVRVVCTEGPDRIRELIAIGASFDRGEDGN---------------------LHLAREGGHSHHRIVHAADMTGREIER 218 (647)
Q Consensus 160 ~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~g~---------------------~~~~~~gg~~~~r~~~~~~~~g~~~~~ 218 (647)
++.++.+++.+++.++||+.+|++|.+..+|. +....++++..+|.++..+.+|..+..
T Consensus 83 ~~~v~~~~~~s~~~i~~L~~~Gv~f~~~~~G~~~~~~~g~~~~~l~~~e~~~~~~~~~~gg~~~~R~~~~~d~tG~~l~~ 162 (660)
T 2bs2_A 83 QKVARMFVNTAPKAIRELAAWGVPWTRIHKGDRMAIINAQKTTITEEDFRHGLIHSRDFGGTKKWRTCYTADATGHTMLF 162 (660)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCBCCSEEEECCCSSCCCEEEECGGGTTSBCCBCCTTCSSCCEECSTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCceecCCCcccccccccccccccchhhhhhhccccccccccceeEeeCCCCHHHHHH
Confidence 99999999999999999999999998766654 444567888889988888888999999
Q ss_pred HHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccccCCCCCCCCCCcchhH
Q 006397 219 ALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGM 298 (647)
Q Consensus 219 ~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~~~~Gdg~ 298 (647)
.|.+.+.+. ||+|++++.|++|+.+ ++ +|.||.+.+..+|+...|.|+.||+||||++.+|..+++++.+||||+
T Consensus 163 ~L~~~a~~~-gv~i~~~~~v~~L~~~-~g---~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~y~~tt~~~~~tGdG~ 237 (660)
T 2bs2_A 163 AVANECLKL-GVSIQDRKEAIALIHQ-DG---KCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCEGTGT 237 (660)
T ss_dssp HHHHHHHHH-TCEEECSEEEEEEEEE-TT---EEEEEEEEETTTCCEEEEECSEEEECCCCCGGGSSSBSSCTTCSCHHH
T ss_pred HHHHHHHhC-CCEEEECcEEEEEEec-CC---EEEEEEEEECCCCcEEEEEcCEEEEccCcchhhcCCCCCCCCcccHHH
Confidence 999999875 9999999999999986 56 899999987777887889999999999999999999999999999999
Q ss_pred HHHHHcCC-eecccccccccceeccCCCCCCCCCCCCCccceeeecccCCCcEEEeCCCCccccccccc-cccCchhHHH
Q 006397 299 AMAHRAQA-VISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDER-AELAPRDVVA 376 (647)
Q Consensus 299 ~~a~~aGa-~l~~~ef~q~~p~~~~~~g~~~~p~~~~~~~~l~~e~~~~~g~~~vn~~G~rf~~~y~~~-~~l~~rd~~~ 376 (647)
.||+++|+ .+.||||+||||+.+... .++++|.++++|++++|.+|+|||++|.+. .+++|||+++
T Consensus 238 ~mA~~aGa~~l~~me~~q~hPt~~~~~------------~~l~se~~rg~g~ilvn~~G~RF~~~y~p~~~ela~rdvv~ 305 (660)
T 2bs2_A 238 AIALETGIAQLGNMEAVQFHPTPLFPS------------GILLTEGCRGDGGILRDVDGHRFMPDYEPEKKELASRDVVS 305 (660)
T ss_dssp HHHHTTSSSCEECTTCEEEESCBBTTT------------CCBCCTHHHHHTCEEECTTCCBCHHHHCTTTGGGSCHHHHH
T ss_pred HHHHHcCCChhcCchhheecccccCCC------------cceecccccCCCcEEECCCCCCcCcccCcccccccchHHHH
Confidence 99999999 999999999999987532 357888999999999999999999999876 7899999999
Q ss_pred HHHHHHHHhcC------CceEEEeCCCCChhHHHhhChhHHHHHHH-cCCCCCCCcEEEeeeeceecceeEeCCCCcccc
Q 006397 377 RSIDDQLKKRN------EKYVLLDISHKPTEKILSHFPNIAAECLK-YGLDITSQPIPVVPAAHYMCGGVRAGLQGETNV 449 (647)
Q Consensus 377 ~~i~~~~~~~~------~~~v~lD~~~~~~~~~~~~~~~~~~~~~~-~G~d~~~~~i~v~p~~~~~~GGi~vD~~~~T~i 449 (647)
++|..++.++. ..++|+|+++++.+.+..++|++.+++.+ .|+||.++|+||.|..||+||||+||.+++|+|
T Consensus 306 rai~~~~~~g~g~~~~~~~~v~ld~~~~~~~~~~~~~p~i~e~~~~~~GiD~~~~~ipv~p~~hyt~GGi~vd~~~~v~I 385 (660)
T 2bs2_A 306 RRMIEHIRKGKGVQSPYGQHLWLDISILGRKHIETNLRDVQEICEYFAGIDPAEKWAPVLPMQHYSMGGIRTDYRGEAKL 385 (660)
T ss_dssp HHHHHHHHTTTSBCCTTCCBEEEECGGGCHHHHHHHSHHHHHHHHHTSCCCTTTSCEEECCEEEEECCEEECCTTSBCSS
T ss_pred HHHHHHHHhcCCccCCCCCEEEEECCCCCHHHHHHHhHHHHHHHHHhcCCCCcccceEeeeeeeeccceEEECCCCceec
Confidence 99999987653 24699999999999999999999999998 599999999999999999999999999999999
Q ss_pred cCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhhcccccccccccccccccCcccccccch-----hhhh
Q 006397 450 RGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMH-----NILR 524 (647)
Q Consensus 450 pGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 524 (647)
|||||||||+|+|+||+|||+||||++|+|||++||++|+++++....+.+. ........ ....++. ....
T Consensus 386 pGLYAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~ 461 (660)
T 2bs2_A 386 KGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHCANTQVDLET--KTLEKFVK--GQEAYMKSLVESKGTE 461 (660)
T ss_dssp BTEEECGGGEECCSSTTCCCTTHHHHHHHHHHHHHHHHHHHHHHHCCCEEEH--HHHHHHHH--HHHHHHHHHHHCCCCB
T ss_pred CCEEeccccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHhhhcCccccc--ccchhHHH--HHHHHHHHHhhccCCC
Confidence 9999999999899999999999999999999999999999987522111000 00000000 0000000 0123
Q ss_pred cHHHHHHHHHHHHHhcCccccCHHHHHHHHHHHHHHHHHHHHhhhcc-CcccccchHHHHHHHHHHHHHHHHHHHHHhcc
Q 006397 525 RTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEH-GWEQTFVGLEACEMRNLFCCAKLVVSSALARH 603 (647)
Q Consensus 525 ~~~~~~~~l~~~m~~~~g~~r~~~~L~~al~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~e~~~~l~~a~~~~~aal~R~ 603 (647)
++.+++.+||++||+|+||+|++++|++|+++|++|++++.++.... ....++++++++|++|||++|+++++|||.|+
T Consensus 462 ~~~~~~~~l~~~m~~~~gi~R~~~~L~~a~~~l~~l~~~~~~~~~~~~~~~~n~~l~~~~e~~~~l~~a~~~~~~Al~R~ 541 (660)
T 2bs2_A 462 DVFKIKNRMKDVMDDNVGIFRDGPHLEKAVKELEELYKKSKNVGIKNKRLHANPELEEAYRVPMMLKVALCVAKGALDRT 541 (660)
T ss_dssp CHHHHHHHHHHHHHHHSSSSBCHHHHHHHHHHHHHHHHHHTTBCCSCCCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHhcCceecCHHHHHHHHHHHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 57789999999999999999999999999999999998875432211 22236788999999999999999999999999
Q ss_pred cCcccccccCCCCCccCCCCCeeec
Q 006397 604 ESRGLHYMVDFPHVEENKRLPTIIL 628 (647)
Q Consensus 604 ESRG~h~R~D~P~~~~~~~~~~~~~ 628 (647)
||||+|||+|||++||++|+++++.
T Consensus 542 ESRG~H~R~D~p~~dd~~~~~~~~~ 566 (660)
T 2bs2_A 542 ESRGAHNREDYPKRDDINWLNRTLA 566 (660)
T ss_dssp SCBTTBCBTTBCSEETTTCCEEEEE
T ss_pred CCceeeecccCcccCchhhceEEEE
Confidence 9999999999999999988887653
No 4
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=100.00 E-value=1.3e-88 Score=760.48 Aligned_cols=521 Identities=35% Similarity=0.537 Sum_probs=448.2
Q ss_pred cccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCC--CCCHHHHHHHHHHhcCCCCCHHH
Q 006397 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCP--SDSVESHMQDTIVAGAYLCDDET 162 (647)
Q Consensus 86 ~~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~--~d~~~~~~~~~~~~g~~~~~~~~ 162 (647)
+.++||||||||+||++||+.|+++| +|+||||....+|++.+++||+...... .|+++.++.+++..+.++++++.
T Consensus 5 ~~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~d~~~ 84 (588)
T 2wdq_A 5 VREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDA 84 (588)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHH
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCCCHHH
Confidence 45799999999999999999999999 9999999998888899999999876654 57889999999999999999999
Q ss_pred HHHHHHhhHHHHHHHHHcCCccccCCCCcccccccCCcc-------ccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcc
Q 006397 163 VRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHS-------HHRIVHAADMTGREIERALLEAVVSDPNISVFEH 235 (647)
Q Consensus 163 ~~~~~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~-------~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~ 235 (647)
+..+++.+++.++|+.++|++|....+|.+....++++. .++.++..+.+|..+...|.+.+++. ||+|+++
T Consensus 85 v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~~~-gv~i~~~ 163 (588)
T 2wdq_A 85 IEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKN-HTTIFSE 163 (588)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHHT-TCEEEET
T ss_pred HHHHHHhHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHHhC-CCEEEeC
Confidence 999999999999999999999998877877666677777 77888887888999999999999885 9999999
Q ss_pred eEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccccCCCCCCCCCCcchhHHHHHHcCCeeccccccc
Q 006397 236 HFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQ 315 (647)
Q Consensus 236 ~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~~~~Gdg~~~a~~aGa~l~~~ef~q 315 (647)
+.|++|+.++++ +|.||.+.+..+|+...|.|+.||+|||+++.+|..+++++.++|||+.||+++|+.+.+|||+|
T Consensus 164 ~~v~~L~~~~~g---~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~y~~~~~~~~~tGdG~~ma~~aGa~l~~me~~q 240 (588)
T 2wdq_A 164 WYALDLVKNQDG---AVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQ 240 (588)
T ss_dssp EEEEEEEECTTS---CEEEEEEEETTTCCEEEEEEEEEEECCCCCGGGSSSBSSCTTCCCHHHHHHHHTTCCEECTTCEE
T ss_pred cEEEEEEECCCC---EEEEEEEEEcCCCeEEEEEcCEEEECCCCCccccCCcCCCCCchHHHHHHHHHcCCCEeChhHhh
Confidence 999999986355 79999998766787778999999999999999999999999999999999999999999999999
Q ss_pred ccceeccCCCCCCCCCCCCCccceeeecccCCCcEEEeCCCCccccccccc-cccCchhHHHHHHHHHHHhcCC------
Q 006397 316 FHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDER-AELAPRDVVARSIDDQLKKRNE------ 388 (647)
Q Consensus 316 ~~p~~~~~~g~~~~p~~~~~~~~l~~e~~~~~g~~~vn~~G~rf~~~y~~~-~~l~~rd~~~~~i~~~~~~~~~------ 388 (647)
|||+.+... .+++++.++++|++++|.+|+|||++|++. .++++||+++++|..++.++++
T Consensus 241 ~hpt~~~~~------------~~l~~e~~rg~g~ilvn~~G~RF~~~~~~~~~el~~rd~v~~ai~~~~~~~~~~~~~~~ 308 (588)
T 2wdq_A 241 FHPTGIAGA------------GVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCDGPWG 308 (588)
T ss_dssp EEEEEETTT------------CCBCCTHHHHTTCEEECTTCCCTHHHHCTTTGGGSCHHHHHHHHHHHHHTTCSBCSTTC
T ss_pred eecceecCC------------cceeeehhccCCcEEECCCCCCCccccCcccchhccHHHHHHHHHHHHHhCCCccCCCC
Confidence 999987642 346788899999999999999999999774 5899999999999999877542
Q ss_pred ceEEEeCCCCChhHHHhhChhHHHHHHHc-CCCCCCCcEEEeeeeceecceeEeCCCCcc----------cccCcccccc
Q 006397 389 KYVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVPAAHYMCGGVRAGLQGET----------NVRGLYVAGE 457 (647)
Q Consensus 389 ~~v~lD~~~~~~~~~~~~~~~~~~~~~~~-G~d~~~~~i~v~p~~~~~~GGi~vD~~~~T----------~ipGLyAaGe 457 (647)
..+|+|+++++.+.+.+++|++.+++.++ |+||.++|++|.|..||+||||+||.++|| +|||||||||
T Consensus 309 ~~v~ld~~~~~~~~~~~~~~~i~e~~~~~~GiD~~~~~i~v~p~~h~t~GGi~vd~~~~vl~~~~~~~g~~I~GLyAaGe 388 (588)
T 2wdq_A 309 PHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGE 388 (588)
T ss_dssp SBEEEECGGGHHHHHHHHCHHHHHHHHHHTCCCTTTSCEEEEEEEEEECCBEEBCTTCEEEEECTTSCEEEEEEEEECGG
T ss_pred CeEEEecccCCHHHHHHHhhHHHHHHHHhCCCCCCCCcEEEeccccccCceEEECCCCCCcccccccCCCeeCCceeCcc
Confidence 36899999998888999999999999997 999999999999999999999999999998 8999999999
Q ss_pred cccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhhcccccccccccccccccCcccccccch-----hhhhcHHHHHHH
Q 006397 458 VACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMH-----NILRRTKEVRKE 532 (647)
Q Consensus 458 ~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 532 (647)
|+|+|+||+||++||||++|+|||++||++|+++++.... ......+.... ...++. .....+.+++.+
T Consensus 389 ~a~~g~hG~nrl~gnsl~~~~vfG~~Ag~~aa~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 462 (588)
T 2wdq_A 389 IACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQGA-LRDASESDVEA-----SLDRLNRWNNNRNGEDPVAIRKA 462 (588)
T ss_dssp GEECSSSTTSCCTTHHHHHHHHHHHHHHHTHHHHHHHHCC-CCCCCHHHHHH-----TTHHHHHHHHCCSSBCHHHHHHH
T ss_pred ccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCc-ccccchhhhhh-----HHHHHHHhhccCCCcCHHHHHHH
Confidence 9988999999999999999999999999999988743210 00000000000 000000 012357788999
Q ss_pred HHHHHHhcCccccCHHHHHHHHHHHHHHHHHHHHhhhc-cCcccccchHHHHHHHHHHHHHHHHHHHHHhcccCcccccc
Q 006397 533 LQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFE-HGWEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYM 611 (647)
Q Consensus 533 l~~~m~~~~g~~r~~~~L~~al~~l~~l~~~~~~~~~~-~~~~~~~~~~~~~e~~~~l~~a~~~~~aal~R~ESRG~h~R 611 (647)
||++||+|+||+|++++|++|+++|++|++++..+... .....++++++++|++||+++|+++++|||.|+||||+|||
T Consensus 463 l~~~m~~~~gi~R~~~~L~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~~e~~~~~~~a~~~~~~al~R~ESRG~H~r 542 (588)
T 2wdq_A 463 LQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSR 542 (588)
T ss_dssp HHHHHHHHSSSSBCHHHHHHHHHHHHHHHHHHTTBCCCCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHCCSCBTTBCB
T ss_pred HHHHHhhcCcEecCHHHHHHHHHHHHHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhCccceeeeec
Confidence 99999999999999999999999999998877543211 11223678899999999999999999999999999999999
Q ss_pred cCCCCCccCCCCCeeec
Q 006397 612 VDFPHVEENKRLPTIIL 628 (647)
Q Consensus 612 ~D~P~~~~~~~~~~~~~ 628 (647)
+|||++||++|+++++.
T Consensus 543 ~D~p~~~~~~~~~~~~~ 559 (588)
T 2wdq_A 543 FDFPDRDDENWLCHSLY 559 (588)
T ss_dssp SSSCSCCHHHHSSEEEE
T ss_pred ccCCccChhhhheeEEE
Confidence 99999999877776553
No 5
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=100.00 E-value=7.5e-87 Score=747.63 Aligned_cols=522 Identities=32% Similarity=0.490 Sum_probs=451.3
Q ss_pred cccccEEEECCcHHHHHHHHHHHhcC---CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHH
Q 006397 86 VKYFDFSVIGSGVAGLCYALEVAKHG---TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDET 162 (647)
Q Consensus 86 ~~~~DVvIIGgG~AGl~aA~~la~~G---~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~ 162 (647)
+.++||||||||+||++||+.|++.| +|+||||....++++.+++||+.......|+++.++.+++..+.+++++..
T Consensus 3 ~~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~ 82 (602)
T 1kf6_A 3 TFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDV 82 (602)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHH
T ss_pred cccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHH
Confidence 45689999999999999999999987 899999998878888899999998777788999999999999999999999
Q ss_pred HHHHHHhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEE
Q 006397 163 VRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLL 242 (647)
Q Consensus 163 ~~~~~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~ 242 (647)
++.+++.+++.++||..+|++|+...+|.+....++++..+|.++..+.+|..+...|.+.+.+..+|+|++++.|++|+
T Consensus 83 v~~~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~ 162 (602)
T 1kf6_A 83 VDYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDIL 162 (602)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEE
Confidence 99999999999999999999999888887777778889889998888888999999999999875339999999999999
Q ss_pred ecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccccCCCCCCCCCCcchhHHHHHHcCCeecccccccccceecc
Q 006397 243 TTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALA 322 (647)
Q Consensus 243 ~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~~~~Gdg~~~a~~aGa~l~~~ef~q~~p~~~~ 322 (647)
.+ ++ +|.||.+.+..+|+...|.|+.||+|||+++.+|..++++..++|||+.|++++|+.+.+|||+||||+.+.
T Consensus 163 ~~-~g---~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~~~~~~~~tGdgi~~a~~aGa~~~~~e~~qfhPt~~~ 238 (602)
T 1kf6_A 163 VD-DG---HVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALSHGVPLRDMEFVQYHPTGLP 238 (602)
T ss_dssp EE-TT---EEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSSSBSSCTTCSCHHHHHHHTTTCCEESTTCEEEEEEECT
T ss_pred Ee-CC---EEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccccCcCCCCCcccHHHHHHHHcCCCccChhHhhccccccC
Confidence 87 55 899998887677887789999999999999999999999999999999999999999999999999999875
Q ss_pred CCCCCCCCCCCCCccceeeecccCCCcEEEeCCCCccccccc---------c-cc--ccCchhHHHHHHHHHHHhcCC--
Q 006397 323 DEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYD---------E-RA--ELAPRDVVARSIDDQLKKRNE-- 388 (647)
Q Consensus 323 ~~g~~~~p~~~~~~~~l~~e~~~~~g~~~vn~~G~rf~~~y~---------~-~~--~l~~rd~~~~~i~~~~~~~~~-- 388 (647)
.. .++++|+++++|++++|.+|+|||++|+ | .. ++++||++++++..++.++.+
T Consensus 239 ~~------------~~l~~e~~rg~g~~lvn~~G~RF~~~y~~~~~~~~~~p~~~~~el~~rd~v~~ai~~~~~~g~g~~ 306 (602)
T 1kf6_A 239 GS------------GILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWHEWRKGNTIS 306 (602)
T ss_dssp TT------------CCBCCTHHHHTTCEEECTTCCCGGGGTTTCSCCCSSCCCTTSGGGSCHHHHHHHHHHHHHHTCSBC
T ss_pred CC------------cceechhhcCCceEEECCCCCCccccccccccccccCCcccccccccHHHHHHHHHHHHHhcCCcc
Confidence 32 4678899999999999999999999997 4 34 899999999999999887542
Q ss_pred ----ceEEEeCCCCChhHHHhhChhHHHHHHH-cCCCCCCCcEEEeeeeceecceeEeCCCCcccccCcccccccccCCC
Q 006397 389 ----KYVLLDISHKPTEKILSHFPNIAAECLK-YGLDITSQPIPVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGL 463 (647)
Q Consensus 389 ----~~v~lD~~~~~~~~~~~~~~~~~~~~~~-~G~d~~~~~i~v~p~~~~~~GGi~vD~~~~T~ipGLyAaGe~a~gG~ 463 (647)
..||+|.++++.+.+..++|++.+++.+ .|+||.++|++|.|..||+||||+||.+++|+||||||||||+|+|+
T Consensus 307 ~~~~~~v~ld~~~~~~~~l~~~~~~~~~~~~~~~G~D~~~~pi~v~p~~h~t~GGi~vd~~~~~~IpGLyAaGe~a~~g~ 386 (602)
T 1kf6_A 307 TPRGDVVYLDLRHLGEKKLHERLPFICELAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGL 386 (602)
T ss_dssp CTTCCBEEEECGGGCHHHHHHHCHHHHHHHHHHHCCCTTTSCEEEEEEEEEECCEEECCTTSBCSSBTEEECGGGEECSS
T ss_pred CCCCcEEEeecccCCHHHHHHHHHHHHHHHHHhcCCCCCcCceEEehhheeeCCeEEECCCCccccCCEEEccccccccc
Confidence 4699999999999999999999999988 59999999999999999999999999999999999999999998899
Q ss_pred CCCCccCchhhHHHHHHHHHHHHHHHHhhhcccccccccccccccccCcccccccch-----hhhhcHHHHHHHHHHHHH
Q 006397 464 HGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMH-----NILRRTKEVRKELQSIMW 538 (647)
Q Consensus 464 ~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~m~ 538 (647)
||+|||+||||++|+|||++||++|++++.... ..... ..... .+. ...++. .....+.+++.+||++||
T Consensus 387 hGanrl~gnsl~~~~vfGr~Ag~~aa~~~~~~~-~~~~~-~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~m~ 461 (602)
T 1kf6_A 387 HGANRLGSNSLAELVVFGRLAGEQATERAATAG-NGNEA-AIEAQ-AAG--VEQRLKDLVNQDGGENWAKIRDEMGLAME 461 (602)
T ss_dssp STTSCCTTHHHHHHHHHHHHHHHHHHHHHHSCC-CCCHH-HHHHH-HHH--HHHHHHHHHHCCCCBCHHHHHHHHHHHHH
T ss_pred cCCCCCccHHHHHHHHHHHHHHHHHHHhhhccC-CCCcc-hhhhh-hHH--HHHHHhhhhccCCCcCHHHHHHHHHHHHH
Confidence 999999999999999999999999999863311 00000 00000 000 000000 011357789999999999
Q ss_pred hcCccccCHHHHHHHHHHHHHHHHHHHHhhhcc-CcccccchHHHHHHHHHHHHHHHHHHHHHhcccCcccccccC--CC
Q 006397 539 RYVGIVRSTTSLQTAEWRIDELEAEWETYLFEH-GWEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVD--FP 615 (647)
Q Consensus 539 ~~~g~~r~~~~L~~al~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~e~~~~l~~a~~~~~aal~R~ESRG~h~R~D--~P 615 (647)
+|+||+|++++|++|+++|++|++++.++.... ....++++++++|++||+++|+++++|||.|+||||+|||+| ||
T Consensus 462 ~~~gi~R~~~~L~~a~~~l~~l~~~~~~~~~~~~~~~~n~~l~~~~e~~~~~~~a~~~~~~al~R~ESRG~H~r~D~~~p 541 (602)
T 1kf6_A 462 EGCGIYRTPELMQKTIDKLAELQERFKRVRITDTSSVFNTDLLYTIELGHGLNVAECMAHSAMARKESRGAHQRLDEGCT 541 (602)
T ss_dssp HHSSSSBCHHHHHHHHHHHHHHHHHHTTBCCCCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHCCSCBTTBCBCSTTCS
T ss_pred hcCCeecCHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhCcCccceEEecccCCC
Confidence 999999999999999999999988875432111 112367889999999999999999999999999999999999 99
Q ss_pred CCccCCCCCeeec
Q 006397 616 HVEENKRLPTIIL 628 (647)
Q Consensus 616 ~~~~~~~~~~~~~ 628 (647)
++||++|++++++
T Consensus 542 ~~d~~~~~~~~~~ 554 (602)
T 1kf6_A 542 ERDDVNFLKHTLA 554 (602)
T ss_dssp SCCTTTCCEEEEE
T ss_pred ccCchhhheEEEE
Confidence 9999988877664
No 6
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=100.00 E-value=2.1e-84 Score=730.51 Aligned_cols=529 Identities=17% Similarity=0.180 Sum_probs=429.3
Q ss_pred cccccEEEECCcHHHHHHHHHHHhc------C-CeEEEEecCCCCCccccccC--CeeeecCCCCCHHHHHHHHHHhcCC
Q 006397 86 VKYFDFSVIGSGVAGLCYALEVAKH------G-TVAVITKAEPHESNTNYAQG--GVSAVLCPSDSVESHMQDTIVAGAY 156 (647)
Q Consensus 86 ~~~~DVvIIGgG~AGl~aA~~la~~------G-~V~vlEk~~~~~g~s~~a~G--gi~~~~~~~d~~~~~~~~~~~~g~~ 156 (647)
+.++||||||||+|||+||+.|++. | +|+||||....++++ +++| |+++... .++++.++.+++..+.+
T Consensus 20 ~~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~s~s-~AqG~~gi~a~l~-~ds~e~~~~~~~~~~~g 97 (662)
T 3gyx_A 20 EHSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLERSGA-VAQGLSAINTYLG-DNNADDYVRMVRTDLMG 97 (662)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTTCST-TTTCEEEECCCCT-TSCHHHHHHHHHHHTTT
T ss_pred eEEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCCCcc-cccCcchheeecC-CCCHHHHHHHHHHhcCC
Confidence 4579999999999999999999998 9 999999998866655 6788 7877765 78899999999999999
Q ss_pred CCCHHHHHHHHHhhHHHHHHHHHcCCccccC-CCCccc----------ccccCCccccceeecCCCcHHHHHHHHHHHHH
Q 006397 157 LCDDETVRVVCTEGPDRIRELIAIGASFDRG-EDGNLH----------LAREGGHSHHRIVHAADMTGREIERALLEAVV 225 (647)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~-~~g~~~----------~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~ 225 (647)
+++++.++.+++++++.++||.++|++|++. ++|.+. ....++++.++..+..+.+|..+...|.+.++
T Consensus 98 l~d~~~v~~l~~~a~~~i~~L~~~Gv~f~~~~~~G~~~~g~~~~~fg~~~~~gg~~~~r~~~~~~~~G~~i~~~L~~~a~ 177 (662)
T 3gyx_A 98 LVREDLIYDLGRHVDDSVHLFEEWGLPVWIKDEHGHNLDGAQAKAAGKSLRNGDKPVRSGRWQIMINGESYKVIVAEAAK 177 (662)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHTCCBCEECSSSCEECHHHHHHHTCCTTTTCCBCCSSTTCEEEEETSHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHcCCCceecCCCCccccchhhhccccccccCccccccceecccCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999876 666543 34467777777655555567788889998887
Q ss_pred cC-CCcEEEcceEEEEEEecCC--CCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccccCCCCCC---------CCCC
Q 006397 226 SD-PNISVFEHHFAIDLLTTLD--GPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTN---------PLVA 293 (647)
Q Consensus 226 ~~-~gv~i~~~~~v~~l~~~~~--g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~~---------~~~~ 293 (647)
+. .||+|++++.|++|+.+++ | +|.||.+.+..+|+...|.|+.||+||||++++|..+++ ++.+
T Consensus 178 ~~~~gV~i~~~~~v~dLi~~~~~~g---~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~~y~~~t~~~~~~~~~~~~~~ 254 (662)
T 3gyx_A 178 NALGQDRIIERIFIVKLLLDKNTPN---RIAGAVGFNLRANEVHIFKANAMVVACGGAVNVYRPRSVGEGMGRAWYPVWN 254 (662)
T ss_dssp HHHCTTTEECSEEECCCEECSSSTT---BEEEEEEEESSSSCEEEEECSEEEECCCCBCSSSCCSCCSGGGGCCSSCTTC
T ss_pred hcCCCcEEEEceEEEEEEEeCCccc---eEEEEEEEEcCCCcEEEEEeCEEEECCCcccccccCcCCccccccccCCCCC
Confidence 73 2999999999999998755 4 899999988778888889999999999999999876554 8899
Q ss_pred cchhHHHHHHcCCeecccccccccceeccCCCCCCCCCCCCCccceeeecccCCCcEEEeCCCCcccccccccc------
Q 006397 294 TGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA------ 367 (647)
Q Consensus 294 ~Gdg~~~a~~aGa~l~~~ef~q~~p~~~~~~g~~~~p~~~~~~~~l~~e~~~~~g~~~vn~~G~rf~~~y~~~~------ 367 (647)
||||++||+++||.+.|||| ||||+.+..... |. ...+|++| ++++|.+|+|||++|+|..
T Consensus 255 tGdG~~mA~~aGA~l~~me~-QfhPt~~~~~~~---p~---~~~~Lise------~ilvn~~GeRFm~~~~p~~~~~~~~ 321 (662)
T 3gyx_A 255 AGSTYTMCAQVGAEMTMMEN-RFVPARFKDGYG---PV---GAWFLLFK------AKATNCKGEDYCATNRAMLKPYEER 321 (662)
T ss_dssp BSHHHHHHHTTTCEEECTTC-CBCCEEETTTCC---CC---HHHHHHHC------CCEECTTSCCHHHHTGGGGHHHHTT
T ss_pred cchHHHHHHHhCCcccCCCe-eEeccccccCCC---CC---CceEEEee------eEEECCCCCEecCCcCchhhccccc
Confidence 99999999999999999997 999999864221 11 11466665 6999999999999999876
Q ss_pred -----ccCchhHHHHHHHHHHHhcCCceEEEeCCC--------CChhHH-----------HhhChhHHHHHHHcCCCCCC
Q 006397 368 -----ELAPRDVVARSIDDQLKKRNEKYVLLDISH--------KPTEKI-----------LSHFPNIAAECLKYGLDITS 423 (647)
Q Consensus 368 -----~l~~rd~~~~~i~~~~~~~~~~~v~lD~~~--------~~~~~~-----------~~~~~~~~~~~~~~G~d~~~ 423 (647)
+|+|||+++++|..++.+++ ++||||+++ ++.+.+ .++||.+...|...|+||.+
T Consensus 322 ~y~~~eLapRDvvsrai~~e~~~G~-g~v~LD~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~i~~~~~~~giD~~~ 400 (662)
T 3gyx_A 322 GYAKGHVIPTCLRNHMMLREMREGR-GPIYMDTKTALQTSFATMSPAQQKHLEAEAWEDFLDMCVGQANLWAATNCAPEE 400 (662)
T ss_dssp TSSTTTCCCHHHHTHHHHHHHHTTC-CCCEECHHHHHHHHTTTSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCCTTT
T ss_pred cccccccCchHHHHHHHHHHHHcCC-CcEEEEccCcchhcccccCHHHHHhhhhhhHHHHHHhChHHHHHHHHcCCCccc
Confidence 69999999999999998854 679999987 554433 45689998889999999999
Q ss_pred CcEEEeeeeceecce------eEeC--------------------CCCcccccCcccccccccCCCCCCCccCchhhHHH
Q 006397 424 QPIPVVPAAHYMCGG------VRAG--------------------LQGETNVRGLYVAGEVACTGLHGANRLASNSLLEA 477 (647)
Q Consensus 424 ~~i~v~p~~~~~~GG------i~vD--------------------~~~~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a 477 (647)
+||||.|++||+||| |+|| .+++|+||||||||||+|+|+||+ ++|||++
T Consensus 401 ~pipV~P~~Hy~mGG~~~~~Gi~vd~~~~~~~~~~~~~~~~~~~~~~~~t~v~gl~a~Ge~~~~~~hg~---~~~sl~~- 476 (662)
T 3gyx_A 401 RGSEIMPTEPYLLGSHSGCCGIWASGPDEAWVPEDYKVRAANGKVYNRMTTVEGLWTCADGVGASGHKF---SSGSHAE- 476 (662)
T ss_dssp CCEEEEECCCBBCSSSSCCCEECCCCCCCTTSCGGGCCCCTTSCCCTTBCSSBTEECCSSSBCSCCCCH---HHHHHHH-
T ss_pred CceeeeeccceecccccccCceeecCccccccccccccccccccccCCCCccCCeEeCccccccccCcc---HhHHHHH-
Confidence 999999999999995 9999 788999999999999999999997 7888877
Q ss_pred HHHHHHHHHHHHHhhhcccc--ccc--cccccccc-ccCccc-c--c-----ccchhhhhcHHHHHHHHHHHHHhcCc--
Q 006397 478 LVFARRAVQPSIDHKKSTSI--DLS--ASNWWTRT-VVPKSL-G--C-----NVMHNILRRTKEVRKELQSIMWRYVG-- 542 (647)
Q Consensus 478 ~v~G~~Ag~~a~~~~~~~~~--~~~--~~~~~~~~-~~~~~~-~--~-----~~~~~~~~~~~~~~~~l~~~m~~~~g-- 542 (647)
|++||..|++|++.... ... +...+... ..+... . . ..+.+...++.+++.+||++||+|+|
T Consensus 477 ---g~~ag~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~~M~~~~g~~ 553 (662)
T 3gyx_A 477 ---GRIVGKQMVRWYLDHKDFKPEFVETAEELKTLIYRPYYNYEKGKGASTCPVVNPEYISPKNFMMRLIKCTDEYGGGV 553 (662)
T ss_dssp ---HHHHHHHHHHHHHHTCSCCCCCSSCHHHHHHHHTHHHHHHHHHGGGCSSSSSCSSSBCHHHHHHHHHHHHHHHTTCT
T ss_pred ---HHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHhhhhhccccccccccCCCCcCHHHHHHHHHHHHHHhcCCC
Confidence 55555555566544310 000 00000000 000000 0 0 00000124688999999999999999
Q ss_pred --cccCHH-HHHHHHHHHHHHHHHHHHhhhccCcccccchHHHHHHHHHHHHHHHHHHHHHhcccCc--ccccccCCCCC
Q 006397 543 --IVRSTT-SLQTAEWRIDELEAEWETYLFEHGWEQTFVGLEACEMRNLFCCAKLVVSSALARHESR--GLHYMVDFPHV 617 (647)
Q Consensus 543 --~~r~~~-~L~~al~~l~~l~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~a~~~~~aal~R~ESR--G~h~R~D~P~~ 617 (647)
++|+++ +|++|+++|++|++++.++ ...+.+++++++|++|||++|+++++|||+|+||| |+|||+|||++
T Consensus 554 ~~v~R~~~~~L~~al~~l~~l~~~~~~~----~~~~~~~l~~~~E~~~~l~~a~~~~~~al~R~ESR~~G~H~R~D~P~~ 629 (662)
T 3gyx_A 554 GTYYNTSKALLDTGFWLMEMLEEDSLKL----AARDLHELLRCWENYHRLWTVRLHMQHIAFREESRYPGFYYRADFLGL 629 (662)
T ss_dssp TTTTEECHHHHHHHHHHHHHHHHHGGGB----CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCSSTTTCEETTSCSC
T ss_pred ccEEEcCHHHHHHHHHHHHHHHHHHhcC----cCCChHHHHHHHHHHhHHHHHHHHHHHHHhCcccccccceecccCCcc
Confidence 999987 9999999999999887543 23456789999999999999999999999999999 99999999999
Q ss_pred ccCCCCCeeec---CCCccccccccccccC
Q 006397 618 EENKRLPTIIL---PSLVNCTWSSRQLHKL 644 (647)
Q Consensus 618 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 644 (647)
||++|++++++ +++.+.++.++|+...
T Consensus 630 dd~~w~~~~~~~~~~~~g~~~~~~~p~~~~ 659 (662)
T 3gyx_A 630 DDSKWKCFVNSKYDPAKKETKIFKKPYYQI 659 (662)
T ss_dssp CTTTCCSEEEEEEETTTTEEEEEEECCEEC
T ss_pred CccccceEEEEEEcCCCCceEEEEeehhcc
Confidence 99888888764 2467888889998764
No 7
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=100.00 E-value=8.2e-77 Score=649.98 Aligned_cols=466 Identities=36% Similarity=0.527 Sum_probs=402.3
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHHHHH
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVCT 168 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~ 168 (647)
||||||||+||++||+.|++.| +|+||||. ..+|++.+++||+.....+.++++.++.+++..+.++++++.++.+++
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~ 79 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS 79 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHH
Confidence 8999999999999999999999 99999999 778889999999998888889999999999999999999999999999
Q ss_pred hhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCC
Q 006397 169 EGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGP 248 (647)
Q Consensus 169 ~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~ 248 (647)
++++.++++.++|++|+.. ...++++..++.++..+.++..+...|.+.+++ .|+++++++.| +|+.+ ++
T Consensus 80 ~~~~~i~~l~~~Gv~~~~~------~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~-~gv~i~~~~~v-~l~~~-~~- 149 (472)
T 2e5v_A 80 EAKNVIETFESWGFEFEED------LRLEGGHTKRRVLHRTDETGREIFNFLLKLARE-EGIPIIEDRLV-EIRVK-DG- 149 (472)
T ss_dssp HHHHHHHHHHHTTCCCCSS------CBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHH-TTCCEECCCEE-EEEEE-TT-
T ss_pred HHHHHHHHHHHcCCCCCcc------cccccCcCcCcEEEeCCCCHHHHHHHHHHHHHh-CCCEEEECcEE-EEEEe-CC-
Confidence 9999999999999998753 345677788888887788899999999999965 59999999999 99876 45
Q ss_pred CceEEEEEEEecCCCeEEEEEcCeEEECCCcccccCCCCCCCCCCcchhHHHHHHcCCeecccccccccceeccCCCCCC
Q 006397 249 DAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPI 328 (647)
Q Consensus 249 ~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~~~~Gdg~~~a~~aGa~l~~~ef~q~~p~~~~~~g~~~ 328 (647)
+|.|+.+.+ .+| .+.|+.||+|||+++.+|+.++++...+|||+.|++++|+.+.+|||+||||+.+...+.
T Consensus 150 --~v~Gv~v~~-~~g---~~~a~~VVlAtGg~~~~~~~~~~~~~~tGdgi~~a~~aGa~~~d~e~~q~~p~~~~~ggg-- 221 (472)
T 2e5v_A 150 --KVTGFVTEK-RGL---VEDVDKLVLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVTSLDGE-- 221 (472)
T ss_dssp --EEEEEEETT-TEE---ECCCSEEEECCCCCGGGSSSBSSCTTCSCHHHHHHHHTTCCEECTTCEEEEEEEECGGGC--
T ss_pred --EEEEEEEEe-CCC---eEEeeeEEECCCCCcccCccccCCCCCchHHHHHHHHcCCCEeCCcceEEEeEEEccCCC--
Confidence 788987743 333 367999999999999999988899999999999999999999999999999987653221
Q ss_pred CCCCCCCccceeeecccCCCcEEEeCCCCccccccccccccCchhHHHHHHHHHHHhcCCceEEEeCCCCChhHHHhhCh
Q 006397 329 KPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDDQLKKRNEKYVLLDISHKPTEKILSHFP 408 (647)
Q Consensus 329 ~p~~~~~~~~l~~e~~~~~g~~~vn~~G~rf~~~y~~~~~l~~rd~~~~~i~~~~~~~~~~~v~lD~~~~~~~~~~~~~~ 408 (647)
.+++++.+++.|++++|..|+|||++|++..++.|||++++++.+++.+++ .+|+|.++++. +..++|
T Consensus 222 --------~~~~ae~~~~~G~~~v~~~g~rf~~~~~~~~el~~rd~v~~~i~~~~~~~~--~v~ld~~~~~~--~~~~~~ 289 (472)
T 2e5v_A 222 --------VFLLTETLRGEGAQIINENGERFLFNYDKRGELAPRDILSRAIYIEMLKGH--KVFIDLSKIED--FERKFP 289 (472)
T ss_dssp --------CEECCTHHHHTTCEEEETTCCCGGGGTCTTGGGSCHHHHHHHHHHHHHHTC--CEEEECTTCTT--HHHHCH
T ss_pred --------ceeeehhhcCCceEEECCCCCCCCccCCcccCcCchhHHHHHHHHHHHhCC--cEEEeccchHH--HHHHhH
Confidence 456788899999999999999999999998899999999999999987754 49999988654 677899
Q ss_pred hHHHHHHHcCCCCCCCcEEEeeeeceecceeEeCCCCcccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHH
Q 006397 409 NIAAECLKYGLDITSQPIPVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPS 488 (647)
Q Consensus 409 ~~~~~~~~~G~d~~~~~i~v~p~~~~~~GGi~vD~~~~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a 488 (647)
+++..+...|+||+ +++++.|..|+++|||+||++++|+||||||||||+|+|+||+||++++++.+|++||++||+++
T Consensus 290 ~~~~~~~~~G~dp~-~~i~v~p~~~~~~GGI~vd~~~~t~ipgLyAaGd~a~~~~hg~~rl~~~sl~~~~v~G~~a~~~~ 368 (472)
T 2e5v_A 290 VVAKYLARHGHNYK-VKIPIFPAAHFVDGGIRVNIRGESNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINLPRYV 368 (472)
T ss_dssp HHHHHHHHTTCCTT-SCEECEEEEEEESCEEECCTTCBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHGGGTT
T ss_pred HHHHHHHHhCcCcc-cceEeehhhceeCCCeEECCCCccccCCEEecchhcccccCCCCCCCcccHHHHHHHHHHHHHHH
Confidence 88889999999999 99999999999999999999999999999999999966999999999999999999999999988
Q ss_pred HHhhhcccccccccccccccccCcccccccchhhhhcHHHHHHHHHHHHHhcCccccCHHHHHHHHHHHHHHHHHHHHhh
Q 006397 489 IDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYL 568 (647)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m~~~~g~~r~~~~L~~al~~l~~l~~~~~~~~ 568 (647)
+++.... ......+.. . .....+.+++.+||++||+|+||+|++++|++|+++|++|++
T Consensus 369 a~~~~~~---~~~~~~~~~-----~-------~~~~~~~~~~~~l~~~m~~~~g~~r~~~~l~~~~~~~~~~~~------ 427 (472)
T 2e5v_A 369 DSSWEGI---STDDGIVHS-----V-------RISGNKTLSLKEIRRINWENVGIIRNEEKLVKAINTYSSSTQ------ 427 (472)
T ss_dssp TSCCCCC---CCTTEEEEE-----E-------CCCCCCCCCHHHHHHHHHHHSSSSBCHHHHHHHHHHHTTCCC------
T ss_pred Hhhcccc---hhhhhhccc-----c-------cccCChHHHHHHHHHHHHHhcCcccCHHHHHHHHHHHHHHHH------
Confidence 7653210 000000000 0 001234456789999999999999999999999999976521
Q ss_pred hccCcccccchHHHHHHHHHHHHHHHHHHHHHhcccCcccccccCCCCCccCCCCCee
Q 006397 569 FEHGWEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFPHVEENKRLPTI 626 (647)
Q Consensus 569 ~~~~~~~~~~~~~~~e~~~~l~~a~~~~~aal~R~ESRG~h~R~D~P~~~~~~~~~~~ 626 (647)
+|+++|+++++|||.|+||||+|||+|||++||+|+++++
T Consensus 428 ------------------~~~~~a~~~~~~al~R~esrG~h~r~d~p~~~~~~~~~~~ 467 (472)
T 2e5v_A 428 ------------------NEAIISYLTALAAEIRKESRGNHFREDYPYKDPNWEKRIY 467 (472)
T ss_dssp ------------------HHHHHHHHHHHHHHHCCSCBTTBCBTTBCSCCGGGCSEEE
T ss_pred ------------------HHHHHHHHHHHHHHhccccccceecccCCCcChhhhceEE
Confidence 3899999999999999999999999999999998665444
No 8
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=100.00 E-value=2e-71 Score=628.39 Aligned_cols=523 Identities=20% Similarity=0.237 Sum_probs=388.3
Q ss_pred ccccccEEEECCcHHHHHHHHHHH---h-cC-CeEEEEecCCCCCccccccCCeeee--cCC------CCCHHHHHHHHH
Q 006397 85 SVKYFDFSVIGSGVAGLCYALEVA---K-HG-TVAVITKAEPHESNTNYAQGGVSAV--LCP------SDSVESHMQDTI 151 (647)
Q Consensus 85 ~~~~~DVvIIGgG~AGl~aA~~la---~-~G-~V~vlEk~~~~~g~s~~a~Ggi~~~--~~~------~d~~~~~~~~~~ 151 (647)
.+.++||||||||+|||+||+.|+ + .| +|+||||....++ +.+++|+.... ..+ .++++.++.+++
T Consensus 19 ~~~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~~s-~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~ 97 (643)
T 1jnr_A 19 EVVETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERS-GAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVT 97 (643)
T ss_dssp EEEECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTC-STTTTCEEEESCCCCSSSSBSCCCCHHHHHHHHH
T ss_pred eeccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCCCC-cceecccccccchhhHHHhcCCCCCHHHHHHHHH
Confidence 345799999999999999999999 6 89 9999999987543 44555553322 222 588999999999
Q ss_pred HhcCCCCCHHHHHHHHHhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCc-
Q 006397 152 VAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNI- 230 (647)
Q Consensus 152 ~~g~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv- 230 (647)
..+.++++++.++.+++++++.++|+.++|++|....+|.+.. .+.... . ..|..+...|.+.+++.+||
T Consensus 98 ~~g~~l~d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~--~~~~~~--~-----~~g~~~~~~l~~~~~~~~gv~ 168 (643)
T 1jnr_A 98 LDMMGLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYVR--EGQWQI--M-----IHGESYKPIIAEAAKMAVGEE 168 (643)
T ss_dssp HHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCBCBCTTSCBCB--SSSSCE--E-----EEETTHHHHHHHHHHHHHCGG
T ss_pred HHhcCcCcHHHHHHHHHHHHHHHHHHHHcCCcceeCCCCCccC--CCcccc--C-----CCcHHHHHHHHHHHHhcCCCc
Confidence 9999999999999999999999999999999998766665422 111100 0 11334667777777653389
Q ss_pred EEEcceEEEEEEecCC--CCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccccCCCCC---------CCCCCcchhHH
Q 006397 231 SVFEHHFAIDLLTTLD--GPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTT---------NPLVATGDGMA 299 (647)
Q Consensus 231 ~i~~~~~v~~l~~~~~--g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~---------~~~~~~Gdg~~ 299 (647)
+|++++.|++|+.+++ + +|.||.+.+..+|+...|.|+.||+||||++.+|..++ +++.+||||+.
T Consensus 169 ~i~~~~~v~~L~~~~~~~g---~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~y~~~~~~~~~~~~~~~~~~tGdG~~ 245 (643)
T 1jnr_A 169 NIYERVFIFELLKDNNDPN---AVAGAVGFSVREPKFYVFKAKAVILATGGATLLFRPRSTGEAAGRTWYAIFDTGSGYY 245 (643)
T ss_dssp GEECSEEEEEEEECTTCTT---BEEEEEEEESSSSCEEEEECSEEEECCCCBCSSSCCSCCSGGGGCCSSCTTCBSHHHH
T ss_pred EEEecCEEEEEEEcCCccc---eeEEEEEEEecCCcEEEEEcCEEEECCCcccccccCcccccccccccCCCCCccHHHH
Confidence 9999999999998644 3 79999988767787778999999999999999886543 47889999999
Q ss_pred HHHHcCCeecccccccccceeccCCCCCCCCCCCCCccceeeecccCCCcEEEeCCCCccccccccccc-cC--------
Q 006397 300 MAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAE-LA-------- 370 (647)
Q Consensus 300 ~a~~aGa~l~~~ef~q~~p~~~~~~g~~~~p~~~~~~~~l~~e~~~~~g~~~vn~~G~rf~~~y~~~~~-l~-------- 370 (647)
||+++||.+.+||+ ||||+.+..... |. ...++ ..|++++|.+|+|||++|++..+ ++
T Consensus 246 mA~~aGa~l~~me~-qf~pt~~~~~~~---~~---~~~~l------~~g~ilvn~~G~RF~~e~~~~~~~~~~~~~~~~~ 312 (643)
T 1jnr_A 246 MGLKAGAMLTQFEH-RFIPFRFKDGYG---PV---GAWFL------FFKCKAKNAYGEEYIKTRAAELEKYKPYGAAQPI 312 (643)
T ss_dssp HHHHHTCCEESTTC-CBCCEEETTTCC---CC---HHHHH------TSCCCEECTTSCCHHHHTSGGGGGGTTGGGSSSC
T ss_pred HHHHhCCccCCchh-eeecccccCCCC---Cc---cccee------cccceEECCCCCchhhccchhhhhHhhhcccCCC
Confidence 99999999999997 999998764211 11 00122 24789999999999999887643 32
Q ss_pred chhHHHHHHHHHHHhcCCceEEEeCCC---------------CChhHH---HhhChhHHHHHHHcCCCCCCCcEEEeeee
Q 006397 371 PRDVVARSIDDQLKKRNEKYVLLDISH---------------KPTEKI---LSHFPNIAAECLKYGLDITSQPIPVVPAA 432 (647)
Q Consensus 371 ~rd~~~~~i~~~~~~~~~~~v~lD~~~---------------~~~~~~---~~~~~~~~~~~~~~G~d~~~~~i~v~p~~ 432 (647)
+||+++++|..++.+++ +++|+|..+ ++.+.+ ...++..+..+.+.|+|+.++|+||.|.+
T Consensus 313 ~rd~~~~~i~~e~~~g~-g~~~l~~~~~~~ela~~~gld~~~l~~~~~~~~l~~~~~~~~~~~~~G~D~~~~~ipv~p~~ 391 (643)
T 1jnr_A 313 PTPLRNHQVMLEIMDGN-QPIYMHTEEALAELAGGDKKKLKHIYEEAFEDFLDMTVSQALLWACQNIDPQEQPSEAAPAE 391 (643)
T ss_dssp CHHHHHHHHHHHHHTTC-CCEEECHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCCTTTSCEEEEECC
T ss_pred CchhhHHHHHHHHhcCC-CCceeeecccHHHHHHHhccChhhhhHHHHHHHHHHhHHHHHHHHhcCCCcccCcccccCCC
Confidence 58899999999998765 568987542 222211 23456677777788999999999999999
Q ss_pred ceecc------eeEeC-----------------CCCcccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHH
Q 006397 433 HYMCG------GVRAG-----------------LQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSI 489 (647)
Q Consensus 433 ~~~~G------Gi~vD-----------------~~~~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~ 489 (647)
||+|| ||+|| .+++|+|||||||||++|+++ ||++||||++ |++||++|+
T Consensus 392 hy~~G~~~t~gGi~~d~~~~vl~~~~~~~v~~~~~~~t~I~GLyAaGe~a~~~~---~r~~~~sl~~----G~~ag~~aa 464 (643)
T 1jnr_A 392 PYIMGSHSGEAGFWVCGPEDLMPEEYAKLFPLKYNRMTTVKGLFAIGDCAGANP---HKFSSGSFTE----GRIAAKAAV 464 (643)
T ss_dssp CBBCSSSSCCCEECCCCCTTTCCHHHHTTCSSCCTTBCSSBTEEECGGGBCSCC---CCHHHHHHHH----HHHHHHHHH
T ss_pred CccccccccccceeecCccccccccccccccccccCCceeCCEEeeeccccccc---cccchhHHHH----HHHHHHHHH
Confidence 99999 99998 456799999999999996543 7898887766 555666666
Q ss_pred Hhhhccc-c-ccc--ccccc-cccccCcc--------cccccchhhhhcHHHHHHHHHHHHHhcCc----cccCHH-HHH
Q 006397 490 DHKKSTS-I-DLS--ASNWW-TRTVVPKS--------LGCNVMHNILRRTKEVRKELQSIMWRYVG----IVRSTT-SLQ 551 (647)
Q Consensus 490 ~~~~~~~-~-~~~--~~~~~-~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~m~~~~g----~~r~~~-~L~ 551 (647)
+++.... . ..+ +.... .....+.. ......+.....+.+++.+||++||+|+| ++|+++ +|+
T Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~M~~~~g~i~~~~R~~~~~L~ 544 (643)
T 1jnr_A 465 RFILEQKPNPEIDDAVVEELKKKAYAPMERFMQYKDLSTADDVNPEYILPWQGLVRLQKIMDEYAAGIATIYKTNEKMLQ 544 (643)
T ss_dssp HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHGGGCSSTTCCTTCBCHHHHHHHHHHHHHHHTTCGGGTTEECHHHHH
T ss_pred HHHhccCCCCCCCHHHHHHHHHHHHhHHHHhhhccccccccccCcCCCCHHHHHHHHHHHHHHHhCCCcceeecCHHHHH
Confidence 6553211 0 000 00000 00000000 00000001123578899999999999999 568755 999
Q ss_pred HHHHHHHHHHHHHHHhhhccCcccccchHHHHHHHHHHHHHHHHHHHHHhcccCc--ccccccCCCCCccCCCCCeeecC
Q 006397 552 TAEWRIDELEAEWETYLFEHGWEQTFVGLEACEMRNLFCCAKLVVSSALARHESR--GLHYMVDFPHVEENKRLPTIILP 629 (647)
Q Consensus 552 ~al~~l~~l~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~a~~~~~aal~R~ESR--G~h~R~D~P~~~~~~~~~~~~~~ 629 (647)
+|+++|++|++++... ...+.+++++++|++||+++|+++++|||.|+||| |+|||+|||++||++|+++++..
T Consensus 545 ~al~~l~~l~~~~~~~----~~~~~~~l~~~~e~~n~l~~a~~i~~aAl~R~ESR~~G~H~R~D~P~~d~~~~~~~~~~~ 620 (643)
T 1jnr_A 545 RALELLAFLKEDLEKL----AARDLHELMRAWELVHRVWTAEAHVRHMLFRKETRWPGYYYRTDYPELNDEEWKCFVCSK 620 (643)
T ss_dssp HHHHHHHHHHHHHTTB----CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCSSTTTCEETTSCSCCTTTCCEEEEEE
T ss_pred HHHHHHHHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCceecccCCccChHHHHHHHhhh
Confidence 9999999998876432 22344678999999999999999999999999999 99999999999999887776532
Q ss_pred ---CCccccccccccccCC
Q 006397 630 ---SLVNCTWSSRQLHKLP 645 (647)
Q Consensus 630 ---~~~~~~~~~~~~~~~~ 645 (647)
++.+......|+...|
T Consensus 621 ~~~~~~~~~~~~~pv~~~~ 639 (643)
T 1jnr_A 621 YDAEKDEWTFEKVPYVQVI 639 (643)
T ss_dssp EETTTTEEEEEEEECCCCB
T ss_pred cccCCCceEEEEeecccCC
Confidence 3456666677777655
No 9
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=100.00 E-value=7.4e-52 Score=464.34 Aligned_cols=376 Identities=30% Similarity=0.427 Sum_probs=303.0
Q ss_pred ccccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecC-------CCCCHHHHHHHHHHhcCC
Q 006397 85 SVKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLC-------PSDSVESHMQDTIVAGAY 156 (647)
Q Consensus 85 ~~~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~-------~~d~~~~~~~~~~~~g~~ 156 (647)
...++||||||||+|||+||+.|+++| +|+||||.+..+|++.+++|+++.... ..++++.++.+++..+.+
T Consensus 123 ~~~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~ 202 (571)
T 1y0p_A 123 PHDTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQN 202 (571)
T ss_dssp CSEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCC
Confidence 345799999999999999999999999 999999999988999999888875432 357889999999999999
Q ss_pred CCCHHHHHHHHHhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCC--CcHHHHHHHHHHHHHcCCCcEEEc
Q 006397 157 LCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAAD--MTGREIERALLEAVVSDPNISVFE 234 (647)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~--~~g~~~~~~L~~~~~~~~gv~i~~ 234 (647)
..++++++.+.+.+.+.++|+.++|++|.. ....+++.+++...+.+ ..+..+...|.+.+++. ||+|++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~-------~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~-gv~i~~ 274 (571)
T 1y0p_A 203 INDPALVKVLSSHSKDSVDWMTAMGADLTD-------VGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKR-NIDLRM 274 (571)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTTCCCCE-------EECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHT-TCEEES
T ss_pred CCCHHHHHHHHHccHHHHHHHHhcCCCCcc-------CcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhc-CCEEEe
Confidence 999999999999999999999999998853 22345566666665544 56788999999999885 999999
Q ss_pred ceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccccc------CC------CCCCCCCCcchhHHHHH
Q 006397 235 HHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHI------YP------STTNPLVATGDGMAMAH 302 (647)
Q Consensus 235 ~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~------~~------~~~~~~~~~Gdg~~~a~ 302 (647)
+++|++|+.++++ +|.||.+.+ .+|+..+|.|+.||+|||+++.. |. .+++++.++|||+.||+
T Consensus 275 ~~~v~~l~~~~~g---~v~Gv~~~~-~~g~~~~i~a~~VVlAtGg~~~n~~~~~~~~p~~~~~~~~~~~~~tGdg~~~a~ 350 (571)
T 1y0p_A 275 NTRGIEVLKDDKG---TVKGILVKG-MYKGYYWVKADAVILATGGFAKNNERVAKLDPSLKGFISTNQPGAVGDGLDVAE 350 (571)
T ss_dssp SEEEEEEEECTTS---CEEEEEEEE-TTTEEEEEECSEEEECCCCCTTCHHHHHHHCGGGTTCCBCSCTTCSSHHHHHHH
T ss_pred CCEeeEeEEcCCC---eEEEEEEEe-CCCcEEEEECCeEEEeCCCcccCHHHHHHhCccccCCcccCCCCCchHHHHHHH
Confidence 9999999987446 899998875 36777789999999999999862 22 46678889999999999
Q ss_pred HcCCeecccccccccceeccCCCCCCCCCCCCCccceeeecccCCCcEEEeCCCCccccccccccccCchhHHHHHHHHH
Q 006397 303 RAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDDQ 382 (647)
Q Consensus 303 ~aGa~l~~~ef~q~~p~~~~~~g~~~~p~~~~~~~~l~~e~~~~~g~~~vn~~G~rf~~~y~~~~~l~~rd~~~~~i~~~ 382 (647)
++|+.+.+|||+|+||+.+...+ .+.++.+++.|+++||.+|+||++ |+.+|+++++++..+
T Consensus 351 ~~Ga~~~~~~~~~~~p~~~~~~~------------~~~~~~~~~~g~i~vn~~G~RF~~------E~~~~~~~~~a~~~~ 412 (571)
T 1y0p_A 351 NAGGALKDMQYIQAHPTLSVKGG------------VMVTEAVRGNGAILVNREGKRFVN------EITTRDKASAAILAQ 412 (571)
T ss_dssp HTTCCEECTTCEEEEEEEETTTC------------SBCCTHHHHTTCEEECTTSCCCSC------TTSCHHHHHHHHHTS
T ss_pred HcCCcEeCCcceeecCcccCCCC------------ceeeecccCCceEEECCCCCCCcC------CCCcHhHHHHHHHhC
Confidence 99999999999999999875322 234567788899999999999997 568899999988765
Q ss_pred HHhcCCceEEEeCCCCC----hhHH-H----hhChhHHHHHHHcC--------------------CCC-----------C
Q 006397 383 LKKRNEKYVLLDISHKP----TEKI-L----SHFPNIAAECLKYG--------------------LDI-----------T 422 (647)
Q Consensus 383 ~~~~~~~~v~lD~~~~~----~~~~-~----~~~~~~~~~~~~~G--------------------~d~-----------~ 422 (647)
.. +..++++|..... .+.. . .+.+++.+++++.| .|+ .
T Consensus 413 ~~--~~~~~i~d~~~~~~~~~~~~~~~~g~~~~~~tl~ela~~~gi~~~~l~~tv~~yn~~~~~g~D~~f~k~~~~~~i~ 490 (571)
T 1y0p_A 413 TG--KSAYLIFDDSVRKSLSKIDKYIGLGVAPTADSLVKLGKMEGIDGKALTETVARYNSLVSSGKDTDFERPNLPRALN 490 (571)
T ss_dssp GG--GCEEEEEEHHHHHHCTTHHHHHHHTCCCEESSHHHHHHHHTSCHHHHHHHHHHHHHHHHHTCCTTTCCSCCCCCSC
T ss_pred cC--CCEEEEEChHHHhhhhhHHHHhhCCeEEEeCCHHHHHHHhCcCHHHHHHHHHHHHHHHHcCCCcccCCCCCCCcCC
Confidence 32 2234555543211 0010 0 12344444444444 332 2
Q ss_pred CCc---EEEeeeeceecceeEeCCCCc------ccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhh
Q 006397 423 SQP---IPVVPAAHYMCGGVRAGLQGE------TNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKK 493 (647)
Q Consensus 423 ~~~---i~v~p~~~~~~GGi~vD~~~~------T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~ 493 (647)
+.| +++.|..|+++|||+||+++| |+|||||||||++ +|+||+||++|++|++|+|||++||++|+++++
T Consensus 491 ~~Pfya~~~~p~~~~t~GGl~id~~~~vl~~~g~~I~GLyAaGe~~-~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~~~~ 569 (571)
T 1y0p_A 491 EGNYYAIEVTPGVHHTMGGVMIDTKAEVMNAKKQVIPGLYGAGEVT-GGVHGANRLGGNAISDIITFGRLAGEEAAKYSK 569 (571)
T ss_dssp SSCEEEEEEEEEEEEECCEEEBCTTCEEECTTSCEEEEEEECSTTE-ESSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCEEEEEEeeeeeEecCCeEECCCceEECCCCCCcCCcEeceEcC-CCCcCCCCCchHhHHHHHHHHHHHHHHHHHHhh
Confidence 345 899999999999999999999 8999999999998 699999999999999999999999999988753
No 10
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=100.00 E-value=4.6e-51 Score=456.84 Aligned_cols=375 Identities=29% Similarity=0.428 Sum_probs=303.5
Q ss_pred cccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecC-------CCCCHHHHHHHHHHhcCCC
Q 006397 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLC-------PSDSVESHMQDTIVAGAYL 157 (647)
Q Consensus 86 ~~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~-------~~d~~~~~~~~~~~~g~~~ 157 (647)
...+||+|||+|++|+++|+.|+++| +|+|+||.+..+|.+.+++|+++.... ..++++.++.+++..+.+.
T Consensus 124 ~~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~ 203 (572)
T 1d4d_A 124 KETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNI 203 (572)
T ss_dssp CEECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 35689999999999999999999999 999999999888999899998876542 3578899999999999999
Q ss_pred CCHHHHHHHHHhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCC--CcHHHHHHHHHHHHHcCCCcEEEcc
Q 006397 158 CDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAAD--MTGREIERALLEAVVSDPNISVFEH 235 (647)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~--~~g~~~~~~L~~~~~~~~gv~i~~~ 235 (647)
.++.+++.+.+.+.+.++|+.++|++|.. ....+++..++.....+ ..+..+...|.+.+++. ||+|+++
T Consensus 204 ~~~~~v~~~~~~~~~~i~~l~~~Gv~~~~-------~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~-gv~i~~~ 275 (572)
T 1d4d_A 204 NDPELVKVLANNSSDSIDWLTSMGADMTD-------VGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKR-GTDIRLN 275 (572)
T ss_dssp SCHHHHHHHHHTHHHHHHHHHHHTCCCCE-------EECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHT-TCEEESS
T ss_pred CCHHHHHHHHHccHHHHHHHHhcCCcccc-------ccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHc-CCeEEec
Confidence 99999999999999999999999998853 22345666667665544 35788999999999885 9999999
Q ss_pred eEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccccc------C------CCCCCCCCCcchhHHHHHH
Q 006397 236 HFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHI------Y------PSTTNPLVATGDGMAMAHR 303 (647)
Q Consensus 236 ~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~------~------~~~~~~~~~~Gdg~~~a~~ 303 (647)
++|++|+.++++ +|.||.+.+ .+|+..+|.|+.||+|||+++.. | ..+++++.++|||+.||++
T Consensus 276 t~v~~l~~~~~g---~v~GV~~~~-~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~p~~~~~~~~~~~~~tGdgi~~a~~ 351 (572)
T 1d4d_A 276 SRVVRILEDASG---KVTGVLVKG-EYTGYYVIKADAVVIAAGGFAKNNERVSKYDPKLKGFKATNHPGATGDGLDVALQ 351 (572)
T ss_dssp EEEEEEEEC--C---CEEEEEEEE-TTTEEEEEECSEEEECCCCCTTCHHHHHHHCGGGTTCCBSSCTTCSSHHHHHHHH
T ss_pred CEEEEEEECCCC---eEEEEEEEe-CCCcEEEEEcCEEEEeCCCCccCHHHHHHhCccccCCCccCCCCCccHHHHHHHH
Confidence 999999987436 799998875 46777789999999999999963 2 1366788999999999999
Q ss_pred cCCeecccccccccceeccCCCCCCCCCCCCCccceeeecccCCCcEEEeCCCCccccccccccccCchhHHHHHHHHHH
Q 006397 304 AQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDDQL 383 (647)
Q Consensus 304 aGa~l~~~ef~q~~p~~~~~~g~~~~p~~~~~~~~l~~e~~~~~g~~~vn~~G~rf~~~y~~~~~l~~rd~~~~~i~~~~ 383 (647)
+|+.+.+|+|+|+||+..... .+++++.++++|+++||.+|+||++ |+.+|+++++++..+.
T Consensus 352 ~Ga~~~~~~~~q~~p~~~~~~------------~~l~~~~~~~~g~i~vn~~G~RF~~------E~~~~~~~~~ai~~~~ 413 (572)
T 1d4d_A 352 AGAATRDLQYIQAHPTYSPAG------------GVMITEAVRGNGAIVVNREGNRFMN------EITTRDKASAAILQQK 413 (572)
T ss_dssp TTBCEECTTCEEEEEEEETTT------------TEECCHHHHHTTCEEECTTSCCCSC------TTSCHHHHHHHHHTSG
T ss_pred cCCeEeCCCceeEecccCCCc------------cccchhhhccCceEEECCCCCCccC------CCCCHhHHHHHHHhCc
Confidence 999999999999999865321 4677788899999999999999997 5678999999988642
Q ss_pred HhcCCceEEEeCCCCC-----hhHH----HhhChhHHHHHHHcCCC--------------------C-----------CC
Q 006397 384 KKRNEKYVLLDISHKP-----TEKI----LSHFPNIAAECLKYGLD--------------------I-----------TS 423 (647)
Q Consensus 384 ~~~~~~~v~lD~~~~~-----~~~~----~~~~~~~~~~~~~~G~d--------------------~-----------~~ 423 (647)
++..++.+|..... ...+ ..+++++.+++++.|+| + .+
T Consensus 414 --~~~~~~i~d~~~~~~~~~~~~~~~~~~~~~~~ti~ela~~~gi~~~~l~~tv~~yn~~~~~g~D~~fg~~~~~~~i~~ 491 (572)
T 1d4d_A 414 --GESAYLVFDDSIRKSLKAIEGYVHLNIVKEGKTIEELAKQIDVPAAELAKTVTAYNGFVKSGKDAQFERPDLPRELVV 491 (572)
T ss_dssp --GGCEEEEECHHHHTTCTHHHHHHHTTCCEEESSHHHHHHHHTCCHHHHHHHHHHHHHHC-CCCCTTTCCSCCCCCCCS
T ss_pred --CCeEEEEEChHHhhhccchHHHhhCCcEEEeCCHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCCcccCCCCCCCcCCC
Confidence 22233444532111 0001 11334555555544443 2 23
Q ss_pred Cc---EEEeeeeceecceeEeCCCCc-------ccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhh
Q 006397 424 QP---IPVVPAAHYMCGGVRAGLQGE-------TNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKK 493 (647)
Q Consensus 424 ~~---i~v~p~~~~~~GGi~vD~~~~-------T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~ 493 (647)
.| +++.|..|++||||+||.++| |+|||||||||++ +|+||+||++|++|++|+|||++||++|+++++
T Consensus 492 ~Pfya~~v~p~~~~t~GGl~id~~~~Vl~~~g~~~I~GLyAaGe~~-~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa~~~~ 570 (572)
T 1d4d_A 492 APFYALEIAPAVHHTMGGLVIDTKAEVKSEKTAKPITGLYAAGEVT-GGVHGANRLGGNAISDIVTYGRIAGASAAKFAK 570 (572)
T ss_dssp SSEEEEEEEEEEEEECCEEEBCTTCEEEBSSSSSEEEEEEECSTTE-ESTTTTSCCTTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEEEEcccceeCCCeEECCCCeEEcCCCCcccCCeeECeecc-cCCCCCCCCchHhHHHHHHHHHHHHHHHHHHhh
Confidence 46 899999999999999999997 8999999999998 799999999999999999999999999998753
No 11
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=100.00 E-value=4.4e-50 Score=449.21 Aligned_cols=376 Identities=29% Similarity=0.420 Sum_probs=301.9
Q ss_pred ccccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeec-------CCCCCHHHHHHHHHHhcCC
Q 006397 85 SVKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL-------CPSDSVESHMQDTIVAGAY 156 (647)
Q Consensus 85 ~~~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~-------~~~d~~~~~~~~~~~~g~~ 156 (647)
.+.++||||||||++|++||+.|+++| +|+||||.+..+|++..++|+++... +..++++.++.+++..+.+
T Consensus 118 ~~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~ 197 (566)
T 1qo8_A 118 PSETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQ 197 (566)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCC
Confidence 456799999999999999999999999 99999999998899999999887543 3468899999999999999
Q ss_pred CCCHHHHHHHHHhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCC--CcHHHHHHHHHHHHHcCCCcEEEc
Q 006397 157 LCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAAD--MTGREIERALLEAVVSDPNISVFE 234 (647)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~--~~g~~~~~~L~~~~~~~~gv~i~~ 234 (647)
..++.+++.+.+.+.+.++|+.++|++|.. ....+++.+++...+.+ ..+..+...|.+.+++. ||+|++
T Consensus 198 ~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~-------~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~-gv~i~~ 269 (566)
T 1qo8_A 198 QNDIKLVTILAEQSADGVQWLESLGANLDD-------LKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQ-GIDTRL 269 (566)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTTCCCCE-------EECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHT-TCCEEC
T ss_pred CCCHHHHHHHHhccHHHHHHHHhcCCcccc-------ccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhc-CCEEEe
Confidence 999999999999999999999999999853 12345566666665544 35788999999999885 999999
Q ss_pred ceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccccc------C-C-----CCCCCCCCcchhHHHHH
Q 006397 235 HHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHI------Y-P-----STTNPLVATGDGMAMAH 302 (647)
Q Consensus 235 ~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~------~-~-----~~~~~~~~~Gdg~~~a~ 302 (647)
+++|++|+.++++ +|.||.+.+ .+|+...|.||.||+|||+++.. | + .+++++.++|||+.||+
T Consensus 270 ~~~v~~l~~~~~g---~v~Gv~~~~-~~g~~~~i~A~~VVlAtGg~s~~~~~~~~~~p~~~~~~~~~~~~~tGdg~~~a~ 345 (566)
T 1qo8_A 270 NSRVVKLVVNDDH---SVVGAVVHG-KHTGYYMIGAKSVVLATGGYGMNKEMIAYYRPTMKDMTSSNNITATGDGVLMAK 345 (566)
T ss_dssp SEEEEEEEECTTS---BEEEEEEEE-TTTEEEEEEEEEEEECCCCCTTCHHHHHHHCGGGTTCEECSCTTCSCHHHHHHH
T ss_pred CCEEEEEEECCCC---cEEEEEEEe-CCCcEEEEEcCEEEEecCCcccCHHHHHHhCccccCCcccCCCCCCcHHHHHHH
Confidence 9999999987436 899998875 46777789999999999999974 2 1 25678889999999999
Q ss_pred HcCCeecccccccccceeccCCCCCCCCCCCCCccceeeecccCCCcEEEeCCCCccccccccccccCchhHHHHHHHHH
Q 006397 303 RAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDDQ 382 (647)
Q Consensus 303 ~aGa~l~~~ef~q~~p~~~~~~g~~~~p~~~~~~~~l~~e~~~~~g~~~vn~~G~rf~~~y~~~~~l~~rd~~~~~i~~~ 382 (647)
++|+.+.+|+|+|+||+..... .+++++.+++.++++||.+|+||++ |+.+|+.+++++..+
T Consensus 346 ~~Ga~~~~~~~~~~~p~~~~~~------------~~~~~~~~~~~g~i~vn~~G~Rf~~------E~~~~~~~~~~~~~~ 407 (566)
T 1qo8_A 346 EIGASMTDIDWVQAHPTVGKDS------------RILISETVRGVGAVMVNKDGNRFIS------ELTTRDKASDAILKQ 407 (566)
T ss_dssp HTTBCEESTTCEEEEEEEESSS------------CSBCCTHHHHTTCEEECTTSCCCSC------TTSCHHHHHHHHHTS
T ss_pred HcCCeEecCcceeecccccCCc------------cccchhhhccCCeEEECCCCCCccC------CCCCHHHHHHHHHhC
Confidence 9999999999999999864321 4567778888999999999999997 557899999888764
Q ss_pred HHhcCCceEEEeCCCCCh-----hHHH----hhChhHHHHHHHc--------------------CCCC-----------C
Q 006397 383 LKKRNEKYVLLDISHKPT-----EKIL----SHFPNIAAECLKY--------------------GLDI-----------T 422 (647)
Q Consensus 383 ~~~~~~~~v~lD~~~~~~-----~~~~----~~~~~~~~~~~~~--------------------G~d~-----------~ 422 (647)
. ++..++.+|...... ..+. .+++++.+++++. |.|+ .
T Consensus 408 ~--~~~~~~i~d~~~~~~~~~~~~~~~~~~~~~~~tl~eLa~~~gi~~~~l~~tv~~yn~~~~~g~d~~fg~~~~~~~i~ 485 (566)
T 1qo8_A 408 P--GQFAWIIFDNQLYKKAKMVRGYDHLEMLYKGDTVEQLAKSTGMKVADLAKTVSDYNGYVASGKDTAFGRADMPLNMT 485 (566)
T ss_dssp G--GGCEEEEEEHHHHHHCHHHHHHHHTTCCEEESSHHHHHHHTTCCHHHHHHHHHHHHHHHHHSCCTTTCCSCCCCCSC
T ss_pred C--CCcEEEEEChHHhhhhhhhHHHhhcCcEEEeCCHHHHHHHhCCCHHHHHHHHHHHHHHHhcCCCcccCCCCCCCcCC
Confidence 2 222344455321110 0000 1223333333333 4442 2
Q ss_pred CCc---EEEeeeeceecceeEeCCCCc------ccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhh
Q 006397 423 SQP---IPVVPAAHYMCGGVRAGLQGE------TNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKK 493 (647)
Q Consensus 423 ~~~---i~v~p~~~~~~GGi~vD~~~~------T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~ 493 (647)
+.| +++.|..|+++|||+||+++| |+|||||||||++ +|+||+||++|++|++|+|||++||++|+++++
T Consensus 486 ~~Pfya~~~~p~~~~t~GGl~vd~~~~vl~~~g~~I~GLyAaGe~~-~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~~~~ 564 (566)
T 1qo8_A 486 QSPYYAVKVAPGIHHTMGGVAINTTASVLDLQSKPIDGLFAAGEVT-GGVHGYNRLGGNAIADTVVFGRIAGDNAAKHAL 564 (566)
T ss_dssp SSSEEEEEEEEEEEEECCEECBCTTCEEEBTTSCEEEEEEECSTTB-CSSSTTCCCTTHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEEEecccceecccEEECCCCeEECCCCCEeCCEEeccccc-CCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhh
Confidence 345 899999999999999999998 7999999999998 799999999999999999999999999998763
No 12
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=100.00 E-value=7.7e-48 Score=425.88 Aligned_cols=371 Identities=19% Similarity=0.217 Sum_probs=278.1
Q ss_pred ccccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeee--------cCCCCCHHHHHHHHHHhcC
Q 006397 85 SVKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAV--------LCPSDSVESHMQDTIVAGA 155 (647)
Q Consensus 85 ~~~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~--------~~~~d~~~~~~~~~~~~g~ 155 (647)
++.++||||||||++||+||+.|+++| +|+||||....+|+|.+++|++... .+..++++.++.+++..+.
T Consensus 38 ~~~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~s~~s~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~ 117 (510)
T 4at0_A 38 WDYEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGATALAGGFIYLGGGTPLQKACGFDDSPENMKTFMMAALG 117 (510)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGSCCCEECCSSCHHHHHTTCCCCHHHHHHHHHHHSC
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcchhcCcceecCCCCHHHHHhCCCCCHHHHHHHHHHHhC
Confidence 356799999999999999999999999 9999999999999998888876532 2457889999999999999
Q ss_pred CCCCHHHHHHHHHhhHHHHHHHHHcCCccccC-----------CCCcccccccCCccc-------cceee-------cCC
Q 006397 156 YLCDDETVRVVCTEGPDRIRELIAIGASFDRG-----------EDGNLHLAREGGHSH-------HRIVH-------AAD 210 (647)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~-----------~~g~~~~~~~gg~~~-------~r~~~-------~~~ 210 (647)
+.+++..++.+.+.+.+.++|+.++|++|... .++.+......++.+ ++... ..+
T Consensus 118 ~~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~~g~e~~~~~~~~~~~~~r~~~~~~~~~~~g~ 197 (510)
T 4at0_A 118 PGADEEKITDYCEGSVEHYNWLVDCGVPFKESFWGEPGWEPPFDDGLMYSGGENAAPFNEIAAPAPRGHVPQMDGKRTGE 197 (510)
T ss_dssp SSCCHHHHHHHHHTHHHHHHHHHHTTCCCCSCEECSSSSSCSSSCSEECCSSTTSTTGGGTSCCCCCEECCCCSSCBTTT
T ss_pred CCCCHHHHHHHHHhhHHHHHHHHHcCCeecccccCCcccccCCcccccccCcccccccccccCcccceeeeccccccccc
Confidence 99999999999999999999999999988654 111111111111111 11111 223
Q ss_pred CcHH-HHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEc-CeEEECCCcccc------
Q 006397 211 MTGR-EIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFIS-KVTLLASGGAGH------ 282 (647)
Q Consensus 211 ~~g~-~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A-~~VVlAtGg~~~------ 282 (647)
..|. .+...|.+.+++. |++|+++++|++|+.++++ +|+||.+.+ +++..+|.| |.||+||||++.
T Consensus 198 ~~g~~~l~~~L~~~~~~~-Gv~i~~~t~v~~L~~~~~g---~v~GV~~~~--~g~~~~i~A~k~VVlAtGG~~~n~~m~~ 271 (510)
T 4at0_A 198 KGGGYMLMKPLVETAEKL-GVRAEYDMRVQTLVTDDTG---RVVGIVAKQ--YGKEVAVRARRGVVLATGSFAYNDKMIE 271 (510)
T ss_dssp BCTTHHHHHHHHHHHHHT-TCEEECSEEEEEEEECTTC---CEEEEEEEE--TTEEEEEEEEEEEEECCCCCTTCHHHHH
T ss_pred CCCHHHHHHHHHHHHHHc-CCEEEecCEeEEEEECCCC---cEEEEEEEE--CCcEEEEEeCCeEEEeCCChhhCHHHHH
Confidence 3455 8899999999885 9999999999999997556 899998875 466778999 599999999994
Q ss_pred -----cCCC-CCCCCCCcchhHHHHHHcCCeecccccccccceeccCCCCCCCCCCCCCccceeeecccCCCcEEEeCCC
Q 006397 283 -----IYPS-TTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGM 356 (647)
Q Consensus 283 -----~~~~-~~~~~~~~Gdg~~~a~~aGa~l~~~ef~q~~p~~~~~~g~~~~p~~~~~~~~l~~e~~~~~g~~~vn~~G 356 (647)
++.. +.+++.++|||+.||+++||.+.+||++|++|... | ..+ .++++||.+|
T Consensus 272 ~~~p~~~~~~~~~~~~~tGdGi~ma~~~Ga~~~~m~~~~~~p~~~--------~------~~~-------~~~i~vn~~G 330 (510)
T 4at0_A 272 AHAPRLIGRPGAAIEEHDGRSILMAQALGADLAHMDATEVAFVCD--------P------QLI-------VRGILVNGRG 330 (510)
T ss_dssp HHCGGGTTCBCCSCTTCCCHHHHHHHTTTBCEECTTCEEEEECSC--------H------HHH-------TTSEEECTTS
T ss_pred HhCccccCCCCCCCCCCCHHHHHHHHHhCcCeecchhhhccCccC--------h------hhc-------cccEEECCCC
Confidence 3332 45677899999999999999999999999776521 1 111 3589999999
Q ss_pred CccccccccccccCchhHHHHHHHHHHHhcCCceEEEeCCCCChhHH----------HhhC--hhHHHHHH---------
Q 006397 357 ERFMPLYDERAELAPRDVVARSIDDQLKKRNEKYVLLDISHKPTEKI----------LSHF--PNIAAECL--------- 415 (647)
Q Consensus 357 ~rf~~~y~~~~~l~~rd~~~~~i~~~~~~~~~~~v~lD~~~~~~~~~----------~~~~--~~~~~~~~--------- 415 (647)
+||+++. .+++.+++++..+. +...++++|.+....... ...+ +++.++++
T Consensus 331 ~RF~nE~------~~~~~~~~~~~~~~--~~~~~~i~D~~~~~~~~~~~~~~~~~~~~~~~~adtleeLA~~~g~~~~~l 402 (510)
T 4at0_A 331 QRYVPED------TYSGRIGQMTLFHQ--DNQAFLIIDEASYEEGAAATTATPFLRVQPKWAAETVEELESDMGLPAGAL 402 (510)
T ss_dssp CBCSCTT------SCHHHHHHCCCCCS--TTCCEEEEEHHHHHHHHHSCCSCGGGCCCCSEEESSHHHHHHHTTCCTTHH
T ss_pred CCCCCCC------ccHHHHHHHHHhCC--CCeEEEEECHHHHHhhhcccccccchhhhhcccCCCHHHHHHHhCcCHHHH
Confidence 9999853 45666666554321 223456677543211000 0000 22333333
Q ss_pred -----------HcCCCCC--CC-----c-------EEE-eeeeceecceeEeCCCCc------ccccCcccccccccCCC
Q 006397 416 -----------KYGLDIT--SQ-----P-------IPV-VPAAHYMCGGVRAGLQGE------TNVRGLYVAGEVACTGL 463 (647)
Q Consensus 416 -----------~~G~d~~--~~-----~-------i~v-~p~~~~~~GGi~vD~~~~------T~ipGLyAaGe~a~gG~ 463 (647)
+.|.|++ +. | +++ .|..|+|+|||+||+++| ++|||||||||++ +|+
T Consensus 403 ~~tv~~yN~~~~~g~D~~fgk~~~~l~pi~~Pfya~~~~~~~~~~t~GGl~~d~~~~Vl~~~g~~I~GLyAaGe~~-gg~ 481 (510)
T 4at0_A 403 QSTVEVYNKHAAEGSDPLLHKKSEWVKPIGTPVAALDLRGFTLGFTLGGLRTTVNSEVLHVSGEPIPGLFAAGRCT-SGV 481 (510)
T ss_dssp HHHHHHHHHHHTTTCCTTTCCCGGGCCCCCSSEEEEECTTCEEEEECCEECBCTTCEEEBTTSSEEEEEEECGGGB-CCS
T ss_pred HHHHHHHHHHHhcCCCcccCCCcccccCCCCCEEEEEeecCcccccCcCeeECCCCceECCCCCCcCCeeeceecc-cCC
Confidence 3455553 22 1 244 478899999999999999 8999999999998 699
Q ss_pred CCCCccCchhhHHHHHHHHHHHHHHHHh
Q 006397 464 HGANRLASNSLLEALVFARRAVQPSIDH 491 (647)
Q Consensus 464 ~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~ 491 (647)
||+||++|++|++|++|||+||++|+++
T Consensus 482 ~g~~y~~G~sl~~~~~fGr~Ag~~aa~~ 509 (510)
T 4at0_A 482 CAGGYASGTSLGDGSFYGRRAGISAAKQ 509 (510)
T ss_dssp CSSSCCTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CcCCCCcHHhHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999998764
No 13
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.97 E-value=6.1e-31 Score=285.86 Aligned_cols=355 Identities=20% Similarity=0.224 Sum_probs=217.7
Q ss_pred cccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHH
Q 006397 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVR 164 (647)
Q Consensus 86 ~~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~ 164 (647)
..++||+|||||++|+++|+.|+++| +|+||||.+..++.+..+.++.+..... ..++.++... . .++....
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~-~~~~~~~~~~-~-----~~~~~~~ 96 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNR-LPLDEIVKHI-P-----GNGRFLY 96 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEEC-SCHHHHHHTC-T-----BTGGGGH
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCc-ccHHHHHHHh-c-----cChHHHH
Confidence 34589999999999999999999999 9999999887665555555554433222 2333332211 0 0111111
Q ss_pred H-H-HHhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEE
Q 006397 165 V-V-CTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLL 242 (647)
Q Consensus 165 ~-~-~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~ 242 (647)
. + .....+.++|+..+|+++.....|.+ ++....+..+...|.+.+++ .||+|+++++|++|.
T Consensus 97 ~~~~~~~~~~~~~~~~~~G~~~~~~~~g~~--------------~p~~~~~~~l~~~L~~~~~~-~GV~i~~~~~V~~i~ 161 (447)
T 2i0z_A 97 SAFSIFNNEDIITFFENLGVKLKEEDHGRM--------------FPVSNKAQSVVDALLTRLKD-LGVKIRTNTPVETIE 161 (447)
T ss_dssp HHHHHSCHHHHHHHHHHTTCCEEECGGGEE--------------EETTCCHHHHHHHHHHHHHH-TTCEEECSCCEEEEE
T ss_pred HHHHhcCHHHHHHHHHhcCCceEEeeCCEE--------------ECCCCCHHHHHHHHHHHHHH-CCCEEEeCcEEEEEE
Confidence 1 1 11234567888889988764332211 12223467888999999988 499999999999998
Q ss_pred ecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccccCCCCCCCCCCcchhHHHHHHcCCeecccc--ccccccee
Q 006397 243 TTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNME--FVQFHPTA 320 (647)
Q Consensus 243 ~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~~~~Gdg~~~a~~aGa~l~~~e--f~q~~p~~ 320 (647)
.+ ++ +|.+|.+ .+|+ .|+|+.||+|||+++. + ...++|||+.++.++|+.+..+. ++++++..
T Consensus 162 ~~-~~---~v~~V~~---~~G~--~i~Ad~VVlAtGg~s~--~----~~g~tG~g~~la~~~G~~~~~~~p~~~~~~~~~ 226 (447)
T 2i0z_A 162 YE-NG---QTKAVIL---QTGE--VLETNHVVIAVGGKSV--P----QTGSTGDGYAWAEKAGHTITELFPTEVPILSNE 226 (447)
T ss_dssp EE-TT---EEEEEEE---TTCC--EEECSCEEECCCCSSS--G----GGSCSSHHHHHHHHTTCCEEEEEECSCCEECCC
T ss_pred ec-CC---cEEEEEE---CCCC--EEECCEEEECCCCCcC--C----CCCCCcHHHHHHHHCCCCcccCcceeeeeecCC
Confidence 76 45 6777765 3454 5899999999999983 2 34789999999999999987765 34444321
Q ss_pred ccCCCCCCCCCCCCCccceeeecccCCCcEEE-eCCCCcccccccc-----ccccCchh-HHHHHHHHHHHhc--CCceE
Q 006397 321 LADEGLPIKPKKTRENSFLITEAVRGDGGILY-NLGMERFMPLYDE-----RAELAPRD-VVARSIDDQLKKR--NEKYV 391 (647)
Q Consensus 321 ~~~~g~~~~p~~~~~~~~l~~e~~~~~g~~~v-n~~G~rf~~~y~~-----~~~l~~rd-~~~~~i~~~~~~~--~~~~v 391 (647)
...... + .....+. ...+.+ |.+|+||+++..+ ++...|.- ..+..+...+... +...+
T Consensus 227 ~~~~~~---~----~~g~~~~-----~~~~~~~~~~g~r~~~~~ge~~~t~~~~~g~~~l~~s~~~~~~~~~~~~~~~~~ 294 (447)
T 2i0z_A 227 PFIRDR---S----LQGLALR-----DINLSVLNPKGKAIISHKMDMLFTHFGLSGPAALRCSQFVVKALKKFKTNTIQM 294 (447)
T ss_dssp HHHHTT---T----TTTCEEE-----EEEEEECC----CEEEEEEEEEECSSEEESHHHHHHHHHHHHHHHHHCCSCEEE
T ss_pred cccccc---c----ccCcccC-----CeEEEEEecCCceEecccCCeEEECCcccHHHHHHHHHHHHHHHhcccCCceEE
Confidence 100000 0 0011101 122445 5667776542111 00011111 1233332333221 22356
Q ss_pred EEeCCC-CChhHHHhh--------------------Chh-H-HHHHHHcCCCCCC-----------------CcEEEee-
Q 006397 392 LLDISH-KPTEKILSH--------------------FPN-I-AAECLKYGLDITS-----------------QPIPVVP- 430 (647)
Q Consensus 392 ~lD~~~-~~~~~~~~~--------------------~~~-~-~~~~~~~G~d~~~-----------------~~i~v~p- 430 (647)
.+|+.. .+.+.+.+. +|. + ..+++..|+++.+ ..+++.+
T Consensus 295 ~~d~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 374 (447)
T 2i0z_A 295 SIDALPEENSEQLFQRMLKQMKEDPKKGIKNVLKGYVPERYFLFLLEKNEIDGSEQAGQVSHEKIRALVKDFKEFTVNVN 374 (447)
T ss_dssp EEESCTTSCHHHHHHHHHHHHTTSTTSBHHHHTTTSSCHHHHHHHHHHTTCCTTSBGGGSCHHHHHHHHHHHHHEEEEEC
T ss_pred EEECCCCCCHHHHHHHHHHHHHhChhhhHHHhccccChHHHHHHHHHHcCCCcCCchhhCCHHHHHHHHHHhhCCEEEec
Confidence 777652 344443111 221 2 2334556888754 2345444
Q ss_pred ------eeceecceeEeCC-CCcc----cccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhh
Q 006397 431 ------AAHYMCGGVRAGL-QGET----NVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKK 493 (647)
Q Consensus 431 ------~~~~~~GGi~vD~-~~~T----~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~ 493 (647)
.+|+|+|||.+|+ +..| .|||||||||++ ++|| |+||++|.+|++||++||++|+++++
T Consensus 375 ~~~~~~~a~~T~GGv~~~~i~~~t~~~~~i~GLy~aGEv~--~v~g--~~GG~~l~~a~~~G~~Ag~~aa~~~~ 444 (447)
T 2i0z_A 375 GTQSIEKAFVTGGGVSVKEINPKEMSSKFTNGLYFCGEVL--DIHG--YTGGYNITSALVTGRIAGTTAGENAK 444 (447)
T ss_dssp EECCGGGCSSEEEEECGGGEETTTTEESSSBTEEECGGGB--SCBC--CTTTHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCccEEEEeCCceeeecccccccccCcCCCEEEEEeec--cCcc--CCCcHHHHHHHHHHHHHHHHHHHhhh
Confidence 3899999999988 4444 799999999998 5888 99999999999999999999998763
No 14
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.89 E-value=1.1e-22 Score=217.03 Aligned_cols=186 Identities=18% Similarity=0.204 Sum_probs=121.2
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHH
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
.++||+|||||++|+++|+.|+++| +|+|+||.+..++....+.||.+........+..++. ....+. ......
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~----~~~~~~-~~~l~~ 77 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLS----QNPHFV-KSALAR 77 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEEC----SCTTST-HHHHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhcc----CCHHHH-HHHHHh
Confidence 3689999999999999999999999 9999999986655444444444422211111111000 000000 111111
Q ss_pred HHHhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecC
Q 006397 166 VCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTL 245 (647)
Q Consensus 166 ~~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~ 245 (647)
+ ...+.++++..+|+++.....+.+ ++.+ .+..+...|.+.+++. ||+++.++.|+++..++
T Consensus 78 ~--~~~~~~~~~~~~Gi~~~~~~~g~~--------------~p~~-~~~~l~~~L~~~~~~~-Gv~i~~~~~v~~i~~~~ 139 (401)
T 2gqf_A 78 Y--TNWDFISLVAEQGITYHEKELGQL--------------FCDE-GAEQIVEMLKSECDKY-GAKILLRSEVSQVERIQ 139 (401)
T ss_dssp S--CHHHHHHHHHHTTCCEEECSTTEE--------------EETT-CTHHHHHHHHHHHHHH-TCEEECSCCEEEEEECC
T ss_pred C--CHHHHHHHHHhCCCceEECcCCEE--------------ccCC-CHHHHHHHHHHHHHHC-CCEEEeCCEEEEEEccc
Confidence 1 123456788889998765433321 1112 4567888898888874 99999999999998752
Q ss_pred ---CCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccccCCCCCCCCCCcchhHHHHHHcCCeeccc
Q 006397 246 ---DGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNM 311 (647)
Q Consensus 246 ---~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~~~~Gdg~~~a~~aGa~l~~~ 311 (647)
++ .+ .|. ..+| .+.|+.||+|||+++. + ..+++|+|+.++.++|+.+..+
T Consensus 140 ~g~~~---~~-~v~---~~~g---~i~ad~VVlAtG~~s~--p----~~g~~G~g~~la~~~G~~i~~~ 192 (401)
T 2gqf_A 140 NDEKV---RF-VLQ---VNST---QWQCKNLIVATGGLSM--P----GLGATPFGYQIAEQFGIPVIPP 192 (401)
T ss_dssp SCSSC---CE-EEE---ETTE---EEEESEEEECCCCSSC--G----GGTCCSHHHHHHHHTTCCEEEE
T ss_pred CcCCC---eE-EEE---ECCC---EEECCEEEECCCCccC--C----CCCCChHHHHHHHHCCCCcccC
Confidence 12 22 232 2334 5899999999999884 2 2378999999999999987654
No 15
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.84 E-value=1.7e-20 Score=200.87 Aligned_cols=187 Identities=19% Similarity=0.253 Sum_probs=123.0
Q ss_pred ccccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHH
Q 006397 85 SVKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETV 163 (647)
Q Consensus 85 ~~~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~ 163 (647)
.+.++||+|||||++|++||+.|+++| +|+|+|+.+..++....+.||.+........+..++. ...... ....
T Consensus 24 ~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~----~~~~~~-~~~l 98 (417)
T 3v76_A 24 VAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLS----GNPHFC-KSAL 98 (417)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEE----SSTTTT-HHHH
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhh----cCHHHH-HHHH
Confidence 345799999999999999999999999 9999999987766555555555433321111111100 000000 0111
Q ss_pred HHHHHhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEe
Q 006397 164 RVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLT 243 (647)
Q Consensus 164 ~~~~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~ 243 (647)
..+ ...+.+++++..|+++.....+.+. + ......+...|.+.+++. |++++.+++|+++..
T Consensus 99 ~~~--~~~~~~~~~~~~Gi~~~~~~~g~~~--------------~-~~~~~~l~~~L~~~l~~~-Gv~i~~~~~V~~i~~ 160 (417)
T 3v76_A 99 ARY--RPQDFVALVERHGIGWHEKTLGQLF--------------C-DHSAKDIIRMLMAEMKEA-GVQLRLETSIGEVER 160 (417)
T ss_dssp HHS--CHHHHHHHHHHTTCCEEECSTTEEE--------------E-SSCHHHHHHHHHHHHHHH-TCEEECSCCEEEEEE
T ss_pred Hhc--CHHHHHHHHHHcCCCcEEeeCCEEe--------------e-CCCHHHHHHHHHHHHHHC-CCEEEECCEEEEEEE
Confidence 111 1234567788889887755444322 1 223567888899999875 999999999999987
Q ss_pred cCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccccCCCCCCCCCCcchhHHHHHHcCCeeccc
Q 006397 244 TLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNM 311 (647)
Q Consensus 244 ~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~~~~Gdg~~~a~~aGa~l~~~ 311 (647)
++ + . +.+. ..+| .+.||.||+|+|+++ ++ ....+|+|+.++...|..+..+
T Consensus 161 ~~-~---~---~~V~-~~~g---~i~ad~VIlAtG~~S--~p----~~gs~g~g~~la~~~G~~i~~~ 211 (417)
T 3v76_A 161 TA-S---G---FRVT-TSAG---TVDAASLVVASGGKS--IP----KMGATGLAYRIAEQFGLPVVET 211 (417)
T ss_dssp ET-T---E---EEEE-ETTE---EEEESEEEECCCCSS--CG----GGTCCCHHHHHHHHTTCCEEEE
T ss_pred eC-C---E---EEEE-ECCc---EEEeeEEEECCCCcc--CC----CCCCCcHHHHHHHHCCCCEecc
Confidence 63 3 2 3332 2344 699999999999987 33 2368899999999999887654
No 16
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.69 E-value=3.2e-16 Score=161.00 Aligned_cols=49 Identities=24% Similarity=0.279 Sum_probs=40.4
Q ss_pred ceeEeCCCCcccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhh
Q 006397 437 GGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKK 493 (647)
Q Consensus 437 GGi~vD~~~~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~ 493 (647)
|.|.||+++||++||+||||||+..++ ..+..|+..|++||.++.+|+.
T Consensus 252 G~I~vd~~~~Ts~p~IyA~GDv~~~~~--------~~~~~A~~~G~~AA~~i~~~L~ 300 (304)
T 4fk1_A 252 GTFVIDDFGRTSEKNIYLAGETTTQGP--------SSLIIAASQGNKAAIAINSDIT 300 (304)
T ss_dssp SSSCSSTTCBCSSTTEEECSHHHHTSC--------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEECcCCccCCCCEEEEeccCCCcc--------hHHHHHHHHHHHHHHHHHHHHh
Confidence 779999999999999999999972122 2356788889999999998874
No 17
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.69 E-value=1.1e-15 Score=168.97 Aligned_cols=154 Identities=24% Similarity=0.267 Sum_probs=92.4
Q ss_pred cccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC--CCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHH
Q 006397 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE--PHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDET 162 (647)
Q Consensus 86 ~~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~--~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~ 162 (647)
..+|||+|||||+||+.||+.|++.| +|+|||+.. ....++..+.||+.. .++.+.+....++
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~---------~~lv~el~al~g~----- 84 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAK---------GQITREIDALGGE----- 84 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHH---------HHHHHHHHHHTCS-----
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhH---------HHHHHHHHhcccH-----
Confidence 34699999999999999999999999 999999974 322222223333311 1111111111111
Q ss_pred HHHHHHhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEE
Q 006397 163 VRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLL 242 (647)
Q Consensus 163 ~~~~~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~ 242 (647)
...++...++.|.....+. .......+ ...+ ...+...|.+.+++.+|++++.. .|++|.
T Consensus 85 ----------~~~~~d~~gi~f~~l~~~k-----gpav~~~r--~~~D--r~~l~~~L~~~l~~~~GV~I~~~-~V~~L~ 144 (641)
T 3cp8_A 85 ----------MGKAIDATGIQFRMLNRSK-----GPAMHSPR--AQAD--KTQYSLYMRRIVEHEPNIDLLQD-TVIGVS 144 (641)
T ss_dssp ----------HHHHHHHHEEEEEEECSSS-----CTTTCEEE--EEEC--HHHHHHHHHHHHHTCTTEEEEEC-CEEEEE
T ss_pred ----------HHHHHHhcCCchhhccccc-----Cccccchh--hhcC--HHHHHHHHHHHHHhCCCCEEEee-EEEEEE
Confidence 0122334455554322110 00001111 1112 34567778888876569999754 899998
Q ss_pred ecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 243 TTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 243 ~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
.+ ++ +|.||.+ .+|. .|.|+.||+|||++..
T Consensus 145 ~d-~g---~V~GV~t---~~G~--~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 145 AN-SG---KFSSVTV---RSGR--AIQAKAAILACGTFLN 175 (641)
T ss_dssp EE-TT---EEEEEEE---TTSC--EEEEEEEEECCTTCBT
T ss_pred ec-CC---EEEEEEE---CCCc--EEEeCEEEECcCCCCC
Confidence 76 45 7888865 3464 6999999999999865
No 18
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.69 E-value=2.2e-15 Score=165.45 Aligned_cols=155 Identities=19% Similarity=0.180 Sum_probs=93.9
Q ss_pred cccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccc------------------cccCCeeeecCCCCCHHHH
Q 006397 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTN------------------YAQGGVSAVLCPSDSVESH 146 (647)
Q Consensus 86 ~~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~------------------~a~Ggi~~~~~~~d~~~~~ 146 (647)
...+||+|||||++|++||+.|++.| +|+|||++...++... ...||...+....-.
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~---- 180 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLY---- 180 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCC----
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceE----
Confidence 34589999999999999999999999 9999999864311000 000110000000000
Q ss_pred HHHHHHhcCCCCCHHHHHHHHHhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHc
Q 006397 147 MQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVS 226 (647)
Q Consensus 147 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~ 226 (647)
..+.++. ......++++...|.+.....++. .+........+...|.+.+++
T Consensus 181 --------~~i~~~~------~~~~~v~~~~~~~G~~~~i~~~~~--------------p~~G~~~~~~l~~~L~~~l~~ 232 (549)
T 3nlc_A 181 --------SQVKDPN------FYGRKVITEFVEAGAPEEILYVSK--------------PHIGTFKLVTMIEKMRATIIE 232 (549)
T ss_dssp --------CCSCCTT------CHHHHHHHHHHHTTCCGGGGTBSS--------------CCCCHHHHHHHHHHHHHHHHH
T ss_pred --------EEecccc------ccHHHHHHHHHHcCCCceEeeccc--------------cccccchHHHHHHHHHHHHHh
Confidence 0000000 001223456667776644321110 001111134677888888887
Q ss_pred CCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 227 DPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 227 ~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
. |++|++++.|++|..+ ++ ++.+|.+ .+|+ ++.|+.||+|+|..++
T Consensus 233 ~-Gv~I~~~t~V~~I~~~-~~---~v~gV~l---~~G~--~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 233 L-GGEIRFSTRVDDLHME-DG---QITGVTL---SNGE--EIKSRHVVLAVGHSAR 278 (549)
T ss_dssp T-TCEEESSCCEEEEEES-SS---BEEEEEE---TTSC--EEECSCEEECCCTTCH
T ss_pred c-CCEEEeCCEEEEEEEe-CC---EEEEEEE---CCCC--EEECCEEEECCCCChh
Confidence 5 9999999999999886 44 6777765 3455 5999999999998774
No 19
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.66 E-value=3.9e-17 Score=179.68 Aligned_cols=36 Identities=36% Similarity=0.620 Sum_probs=33.2
Q ss_pred cccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 86 ~~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
+.+|||+|||||++|+.||+++++.| +|+|||+...
T Consensus 40 ~ydYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~ 76 (542)
T 4b1b_A 40 TYDYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKP 76 (542)
T ss_dssp CSSEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCeEEEEecccc
Confidence 45799999999999999999999999 9999998664
No 20
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.66 E-value=2.9e-16 Score=161.80 Aligned_cols=51 Identities=25% Similarity=0.295 Sum_probs=41.3
Q ss_pred cceeEeCCCCcccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhhc
Q 006397 436 CGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 436 ~GGi~vD~~~~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
.|.|.||+++||++||+||+|||+..+. + ....|+-.|++||.+|++|++.
T Consensus 257 ~G~I~vd~~~~Ts~pgIyA~GDv~~~~~----~----~~~~A~~~G~~AA~~i~~~L~~ 307 (312)
T 4gcm_A 257 VGYIVTKDDMTTSVPGIFAAGDVRDKGL----R----QIVTATGDGSIAAQSAAEYIEH 307 (312)
T ss_dssp TSCBCCCTTSBCSSTTEEECSTTBSCSC----C----SHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEeeCCCCccCCCCEEEEeecCCCcc----h----HHHHHHHHHHHHHHHHHHHHHh
Confidence 4779999999999999999999972122 1 2456788899999999999854
No 21
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.64 E-value=6.8e-17 Score=178.36 Aligned_cols=157 Identities=16% Similarity=0.185 Sum_probs=86.6
Q ss_pred cccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHH
Q 006397 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVR 164 (647)
Q Consensus 86 ~~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~ 164 (647)
+.+|||+|||||+||++||+.|++.| +|+|+||.+....++.+..||.+...+ |.|....
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~G-------------------ciPsk~l 90 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVG-------------------CIPKKLM 90 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHS-------------------HHHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcC-------------------ccchHHH
Confidence 34699999999999999999999999 999999976433333334455442211 2233322
Q ss_pred HHHHhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEec
Q 006397 165 VVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTT 244 (647)
Q Consensus 165 ~~~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~ 244 (647)
.........+..+..+|+.+.....- . +.......+.....+...+...+++ .+|+++.+. +..+ +
T Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~~~~~--d--------~~~~~~~~~~~~~~l~~~~~~~~~~-~gV~~i~g~-a~~~--d 156 (519)
T 3qfa_A 91 HQAALLGQALQDSRNYGWKVEETVKH--D--------WDRMIEAVQNHIGSLNWGYRVALRE-KKVVYENAY-GQFI--G 156 (519)
T ss_dssp HHHHHHHHHHHHHHHTTBCCCSSCCB--C--------HHHHHHHHHHHHHHHHHHHHHHHHH-TTCEEECSE-EEEE--E
T ss_pred HHHHHHHHHHHHHHhcCcccCCcCcc--C--------HHHHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEEE-EEEe--e
Confidence 22333344455666777765321110 0 0000000000011122223333444 499998875 3322 2
Q ss_pred CCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccccc
Q 006397 245 LDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHI 283 (647)
Q Consensus 245 ~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~ 283 (647)
.. . +.+.+ .+|+..++.+|.||+|||+....
T Consensus 157 -~~---~---v~v~~-~~g~~~~i~~d~lViATGs~p~~ 187 (519)
T 3qfa_A 157 -PH---R---IKATN-NKGKEKIYSAERFLIATGERPRY 187 (519)
T ss_dssp -TT---E---EEEEC-TTCCCCEEEEEEEEECCCEEECC
T ss_pred -CC---E---EEEEc-CCCCEEEEECCEEEEECCCCcCC
Confidence 22 2 23322 45655579999999999986643
No 22
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.61 E-value=7.9e-16 Score=158.50 Aligned_cols=51 Identities=18% Similarity=0.143 Sum_probs=40.4
Q ss_pred cceeEeCCCCcccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhhc
Q 006397 436 CGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 436 ~GGi~vD~~~~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
..|+.||+++||++||+||||||+ ++.+ + ....|+-.|++||.+|.+|+++
T Consensus 263 ~~G~iv~~~~~Ts~pgIyA~GDv~-~~~~---~----~~~~A~~~G~~AA~~~~~yL~~ 313 (314)
T 4a5l_A 263 DDGYILTEGPKTSVDGVFACGDVC-DRVY---R----QAIVAAGSGCMAALSCEKWLQT 313 (314)
T ss_dssp TTSCBCCBTTBCSSTTEEECSTTT-CSSC---C----CHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCeeEeCCCCccCCCCEEEEEecc-CCcc---h----HHHHHHHHHHHHHHHHHHHHhc
Confidence 357779999999999999999997 3321 2 2345777899999999999864
No 23
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.60 E-value=1.9e-15 Score=165.76 Aligned_cols=156 Identities=21% Similarity=0.262 Sum_probs=85.1
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHH
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
.+|||+|||||+||++||+.|++.| +|+|+||......++....||.+...+ |.|.....
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~g-------------------ciPsk~l~ 65 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVG-------------------CIPKKLMH 65 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHS-------------------HHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccC-------------------CcccHHHH
Confidence 4699999999999999999999999 999999854432222233344432111 22333333
Q ss_pred HHHhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecC
Q 006397 166 VCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTL 245 (647)
Q Consensus 166 ~~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~ 245 (647)
........+..+..+|+.+.....-. +.......+.....+...+...+.+ .+|+++.+. +..+ +
T Consensus 66 ~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~-~~V~~i~g~-~~~~--~- 130 (488)
T 3dgz_A 66 QAALLGGMIRDAHHYGWEVAQPVQHN----------WKTMAEAVQNHVKSLNWGHRVQLQD-RKVKYFNIK-ASFV--D- 130 (488)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSSCCCC----------HHHHHHHHHHHHHHHHHHHHHHHHH-TTCEEECCE-EEES--S-
T ss_pred HHHHHHHHHHHHHhcCcccCCcCccC----------HHHHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEEE-EEEc--c-
Confidence 33334444556667777654211100 0000000000011122223334444 489998774 2222 2
Q ss_pred CCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccccc
Q 006397 246 DGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHI 283 (647)
Q Consensus 246 ~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~ 283 (647)
.. . +.+. ..+|+...+.+|.||+|||+....
T Consensus 131 ~~---~---v~v~-~~~g~~~~~~~d~lViATGs~p~~ 161 (488)
T 3dgz_A 131 EH---T---VRGV-DKGGKATLLSAEHIVIATGGRPRY 161 (488)
T ss_dssp SS---E---EEEE-CTTSCEEEEEEEEEEECCCEEECC
T ss_pred CC---e---EEEE-eCCCceEEEECCEEEEcCCCCCCC
Confidence 22 2 2332 245665689999999999976643
No 24
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.59 E-value=2.1e-15 Score=165.46 Aligned_cols=39 Identities=36% Similarity=0.542 Sum_probs=33.1
Q ss_pred cccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006397 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 86 ~~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g 124 (647)
+.++||+|||||+||++||+.|++.| +|+|+||....+|
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG 62 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGG 62 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSH
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 34699999999999999999999999 9999999765544
No 25
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.58 E-value=3.8e-16 Score=161.26 Aligned_cols=53 Identities=15% Similarity=0.164 Sum_probs=43.0
Q ss_pred cceeEeCCCCcccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhhc
Q 006397 436 CGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 436 ~GGi~vD~~~~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
.|+|.||++++|++|||||+|||+ +..+ .......|+..|+.||.++++++.+
T Consensus 266 ~g~i~vd~~~~t~~~~vya~GD~~--~~~~----~~~~~~~A~~~g~~aa~~i~~~l~~ 318 (323)
T 3f8d_A 266 NGYIKVDEWMRTSVPGVFAAGDCT--SAWL----GFRQVITAVAQGAVAATSAYRYVTE 318 (323)
T ss_dssp TSSBCCCTTCBCSSTTEEECSTTB--STTT----TCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEecCCCceecCCCEEEcceec--CCCC----cccceeehhhHHHHHHHHHHHHHHH
Confidence 489999999999999999999997 2211 1235677888999999999998754
No 26
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.57 E-value=1.5e-15 Score=166.08 Aligned_cols=39 Identities=38% Similarity=0.543 Sum_probs=34.8
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCcc
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNT 126 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s 126 (647)
+|||+|||||++|++||+.|++.| +|+|+||....+|.+
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~ 42 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKT 42 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSB
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCC
Confidence 599999999999999999999999 999999987554443
No 27
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.57 E-value=5.2e-16 Score=160.97 Aligned_cols=54 Identities=20% Similarity=0.230 Sum_probs=43.2
Q ss_pred ecceeEeCCCCcccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhhc
Q 006397 435 MCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 435 ~~GGi~vD~~~~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
..|+|.||++++|++|||||+|||+ .+++..+++ ..|+..|+.||.++.+++..
T Consensus 263 ~~g~i~vd~~~~t~~~~vya~GD~~--~~~~~~~~~----~~A~~~g~~aa~~i~~~l~~ 316 (332)
T 3lzw_A 263 EKNSIVVKSTMETNIEGFFAAGDIC--TYEGKVNLI----ASGFGEAPTAVNNAKAYMDP 316 (332)
T ss_dssp ETTEEECCTTSBCSSTTEEECGGGE--ECTTCCCCH----HHHHHHHHHHHHHHHHHHCT
T ss_pred cCCeEEeCCCCceecCCEEEcccee--cCCCCcceE----eeehhhHHHHHHHHHHhhCh
Confidence 4689999999999999999999997 455555544 45666788999999888754
No 28
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.57 E-value=2.1e-15 Score=165.23 Aligned_cols=35 Identities=34% Similarity=0.363 Sum_probs=32.2
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
.+|||+|||||++|++||+.|+++| +|+||||...
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~ 60 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEYRI 60 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCCCC
Confidence 4699999999999999999999999 9999999543
No 29
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.57 E-value=4.6e-15 Score=162.40 Aligned_cols=39 Identities=26% Similarity=0.444 Sum_probs=34.4
Q ss_pred cccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006397 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 86 ~~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g 124 (647)
+.++||+|||||++|+++|+.|++.| +|+|+|+.+..+|
T Consensus 4 ~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG 43 (482)
T 1ojt_A 4 DAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGG 43 (482)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCC
Confidence 34699999999999999999999999 9999999765443
No 30
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.57 E-value=1.4e-13 Score=151.74 Aligned_cols=182 Identities=19% Similarity=0.204 Sum_probs=102.2
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC--CCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHH
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE--PHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETV 163 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~--~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~ 163 (647)
.+|||||||||+||+.||+.|++.| +|+|||+.. ....++..+.||+. .. ++.+.+....+.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia--------~g-~lv~eldalgg~------ 90 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIA--------KG-IVVREIDALGGE------ 90 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTT--------HH-HHHHHHHHHTCS------
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccc--------hH-HHHHHHHHhhhH------
Confidence 3599999999999999999999999 999999974 22111212222221 11 111111110000
Q ss_pred HHHHHhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEe
Q 006397 164 RVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLT 243 (647)
Q Consensus 164 ~~~~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~ 243 (647)
....+...++.|...... .+.......... ....+...|.+.+++.+|++|+ ++.|++|..
T Consensus 91 ---------~~~~~d~~gi~f~~l~~~-------kGpav~~~r~~~--Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~ 151 (637)
T 2zxi_A 91 ---------MGKAIDQTGIQFKMLNTR-------KGKAVQSPRAQA--DKKRYREYMKKVCENQENLYIK-QEEVVDIIV 151 (637)
T ss_dssp ---------HHHHHHHHEEEEEEESTT-------SCGGGCEEEEEE--CHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEE
T ss_pred ---------HHHHhhhcccceeecccc-------cCccccchhhhC--CHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEe
Confidence 011223344555421110 010001000111 1346778888888764699995 579999988
Q ss_pred cCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccccc--CC-CCCCCCCCcchh----HH-HHHHcCCeeccc
Q 006397 244 TLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHI--YP-STTNPLVATGDG----MA-MAHRAQAVISNM 311 (647)
Q Consensus 244 ~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~--~~-~~~~~~~~~Gdg----~~-~a~~aGa~l~~~ 311 (647)
+ ++ +|.||.+ .+|. .|.|+.||+|||+++.. ++ ...++.+..|++ ++ ...+.|..+..+
T Consensus 152 e-~g---~V~GV~t---~dG~--~i~AdaVVLATG~~s~~~~~~G~~~~~~Gr~G~~~A~~la~~L~~lG~~v~~l 218 (637)
T 2zxi_A 152 K-NN---QVVGVRT---NLGV--EYKTKAVVVTTGTFLNGVIYIGDKMIPGGRLGEPRSEGLSDFYRRFDFPLIRF 218 (637)
T ss_dssp S-SS---BEEEEEE---TTSC--EEECSEEEECCTTCBTCEEEETTEEEECSBTTBCCBCTHHHHHHHTTCCCEEE
T ss_pred c-CC---EEEEEEE---CCCc--EEEeCEEEEccCCCccCceeccceecCCCCCCchhHHHHHHHHHhcCCceEEe
Confidence 6 45 7888876 3464 69999999999998753 21 122233334433 22 234677766544
No 31
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.55 E-value=1.3e-15 Score=166.74 Aligned_cols=155 Identities=18% Similarity=0.252 Sum_probs=81.6
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCC-CccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHH
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHE-SNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVR 164 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~-g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~ 164 (647)
.+|||+|||||+||++||+.|++.| +|+||||..... .++.+..||.+...+ |.|....
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~g-------------------ciPsk~l 68 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVG-------------------CIPKKLM 68 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHS-------------------HHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccC-------------------chhhHHH
Confidence 4699999999999999999999999 999999743322 122223344432111 2233222
Q ss_pred HHHHhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEec
Q 006397 165 VVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTT 244 (647)
Q Consensus 165 ~~~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~ 244 (647)
.........+..+..+|+.+..... +. +..........-..+...+...+.+ .+|+++.+... +. +
T Consensus 69 ~~~~~~~~~~~~~~~~g~~~~~~~~--~~--------~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~g~a~--~~-~ 134 (483)
T 3dgh_A 69 HQASLLGEAVHEAAAYGWNVDDKIK--PD--------WHKLVQSVQNHIKSVNWVTRVDLRD-KKVEYINGLGS--FV-D 134 (483)
T ss_dssp HHHHHHHHHHHHHHHTTBCCCCCCC--BC--------HHHHHHHHHHHHHHHHHHHHHHHHH-TTCEEECSEEE--EE-E
T ss_pred HHHHHHHHHHHHHHhcCcccCCcCc--cC--------HHHHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeEEE--Ec-c
Confidence 2233333445556667766542110 00 0000000000001111222233444 48999887532 22 2
Q ss_pred CCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccccc
Q 006397 245 LDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHI 283 (647)
Q Consensus 245 ~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~ 283 (647)
.. . +.+. ..+|+ ..+.+|.||+|||+....
T Consensus 135 -~~---~---v~v~-~~~g~-~~~~~d~lviATGs~p~~ 164 (483)
T 3dgh_A 135 -SH---T---LLAK-LKSGE-RTITAQTFVIAVGGRPRY 164 (483)
T ss_dssp -TT---E---EEEE-CTTCC-EEEEEEEEEECCCEEECC
T ss_pred -CC---E---EEEE-eCCCe-EEEEcCEEEEeCCCCcCC
Confidence 22 2 2332 24454 479999999999976643
No 32
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.54 E-value=6.3e-13 Score=147.04 Aligned_cols=153 Identities=23% Similarity=0.277 Sum_probs=89.4
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC--CCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHH
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE--PHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETV 163 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~--~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~ 163 (647)
.+|||||||||+||+.||+.|++.| +|+|||+.. ....++..+.||+. . .++.+.+..-.+.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia--------~-~~lv~ei~algg~------ 91 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIG--------K-GHLVKEVDALGGL------ 91 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTT--------H-HHHHHHHHHTTCS------
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchh--------h-HHHHHHHHHhccH------
Confidence 3599999999999999999999999 999999974 22111212222221 1 1111111111100
Q ss_pred HHHHHhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEe
Q 006397 164 RVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLT 243 (647)
Q Consensus 164 ~~~~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~ 243 (647)
...+....++.|...... .+.......... ....+...|.+.+++..|++++ ++.|++|..
T Consensus 92 ---------~~~~~d~~gi~f~~l~~~-------kgpav~~~r~~~--Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~ 152 (651)
T 3ces_A 92 ---------MAKAIDQAGIQFRILNAS-------KGPAVRATRAQA--DRVLYRQAVRTALENQPNLMIF-QQAVEDLIV 152 (651)
T ss_dssp ---------HHHHHHHHEEEEEEESTT-------SCGGGCEEEEEE--CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEE
T ss_pred ---------HHHHhhhcccchhhhhcc-------cCcccccchhhC--CHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEe
Confidence 011222334444321110 000000000011 1345777788888764599995 569999988
Q ss_pred cCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 244 TLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 244 ~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
+ ++ +|.||.+ .+|. .|.|+.||+|||+++.
T Consensus 153 e-~g---~V~GV~t---~dG~--~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 153 E-ND---RVVGAVT---QMGL--KFRAKAVVLTVGTFLD 182 (651)
T ss_dssp S-SS---BEEEEEE---TTSE--EEEEEEEEECCSTTTC
T ss_pred c-CC---EEEEEEE---CCCC--EEECCEEEEcCCCCcc
Confidence 6 44 6888865 3564 6899999999999875
No 33
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.54 E-value=9.6e-15 Score=153.61 Aligned_cols=118 Identities=16% Similarity=0.202 Sum_probs=77.7
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHH
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
..+||+|||||++|+++|+.|++.| +|+|||+.+..+|.....
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~------------------------------------ 56 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAAL------------------------------------ 56 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHT------------------------------------
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccc------------------------------------
Confidence 3589999999999999999999999 999999986543211000
Q ss_pred HHHhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecC
Q 006397 166 VCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTL 245 (647)
Q Consensus 166 ~~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~ 245 (647)
.+... ..... + . ....+..+...|.+.+.+ .+++++.++.|+.+..++
T Consensus 57 ----------------~~~~~------~~~~~-~--~------~~~~~~~~~~~l~~~~~~-~~~~~~~~~~v~~i~~~~ 104 (360)
T 3ab1_A 57 ----------------YPEKH------IYDVA-G--F------PEVPAIDLVESLWAQAER-YNPDVVLNETVTKYTKLD 104 (360)
T ss_dssp ----------------CTTSE------ECCST-T--C------SSEEHHHHHHHHHHHHHT-TCCEEECSCCEEEEEECT
T ss_pred ----------------CCCcc------cccCC-C--C------CCCCHHHHHHHHHHHHHH-hCCEEEcCCEEEEEEECC
Confidence 00000 00000 0 0 001244677777777876 489999999999998764
Q ss_pred CCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 246 DGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 246 ~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
++ .+ -|.. .+|+ .+.++.||+|+|..+
T Consensus 105 ~~---~~-~v~~---~~g~--~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 105 DG---TF-ETRT---NTGN--VYRSRAVLIAAGLGA 131 (360)
T ss_dssp TS---CE-EEEE---TTSC--EEEEEEEEECCTTCS
T ss_pred Cc---eE-EEEE---CCCc--EEEeeEEEEccCCCc
Confidence 43 12 1222 3454 589999999999864
No 34
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.52 E-value=1.5e-14 Score=158.24 Aligned_cols=36 Identities=36% Similarity=0.552 Sum_probs=32.9
Q ss_pred cccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 86 ~~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
+..+||+|||||++|++||+.|++.| +|+|+|+...
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~~ 54 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESHKL 54 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Confidence 45699999999999999999999999 9999998754
No 35
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.52 E-value=5e-14 Score=153.47 Aligned_cols=37 Identities=30% Similarity=0.345 Sum_probs=33.5
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g 124 (647)
+|||+|||||++|+++|+.|++.| +|+|+||....+|
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG 41 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGG 41 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCC
Confidence 599999999999999999999999 9999997765543
No 36
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.51 E-value=2.4e-14 Score=148.86 Aligned_cols=53 Identities=15% Similarity=0.215 Sum_probs=41.5
Q ss_pred cceeEeCCCCcccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhhc
Q 006397 436 CGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 436 ~GGi~vD~~~~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
.|+|.||++++|++|||||+|||+ +.++..++ ...|...|+.||.++..++..
T Consensus 266 ~g~i~vd~~~~t~~~~vya~GD~~--~~~~~~~~----~~~A~~~g~~aa~~i~~~l~~ 318 (335)
T 2zbw_A 266 KNKIKVDTTMATSIPGVYACGDIV--TYPGKLPL----IVLGFGEAAIAANHAAAYANP 318 (335)
T ss_dssp TTEEECCTTCBCSSTTEEECSTTE--ECTTCCCC----HHHHHHHHHHHHHHHHHHHCT
T ss_pred CCeeeeCCCCCCCCCCEEEecccc--ccCcchhh----hhhhHHHHHHHHHHHHHHhhh
Confidence 589999999999999999999997 33433333 345666799999999888754
No 37
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.51 E-value=2.8e-14 Score=155.37 Aligned_cols=33 Identities=27% Similarity=0.515 Sum_probs=31.3
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
++||+|||||++|+++|+.|++.| +|+|+|+..
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~ 36 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY 36 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 589999999999999999999999 999999983
No 38
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.50 E-value=3.1e-14 Score=155.60 Aligned_cols=34 Identities=29% Similarity=0.509 Sum_probs=32.0
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
.++||+|||||++|+++|+.|++.| +|+|+|++.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4689999999999999999999999 999999974
No 39
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.50 E-value=1.7e-14 Score=157.13 Aligned_cols=34 Identities=29% Similarity=0.368 Sum_probs=31.6
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
.+|||+|||||++|+++|+.|++.| +|+|+||..
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~~ 38 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEFR 38 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 3589999999999999999999999 999999944
No 40
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.50 E-value=4e-14 Score=155.22 Aligned_cols=32 Identities=44% Similarity=0.609 Sum_probs=30.1
Q ss_pred ccccEEEECCcHHHHHHHHHHHh-cC-CeEEEEe
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAK-HG-TVAVITK 118 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~-~G-~V~vlEk 118 (647)
.++||+|||||++|++||+.|++ .| +|+|+|+
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 46999999999999999999999 99 9999993
No 41
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.49 E-value=1.1e-14 Score=158.85 Aligned_cols=38 Identities=26% Similarity=0.368 Sum_probs=34.1
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g 124 (647)
.++||+|||||++|+++|+.|++.| +|+|+|+.+..+|
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG 43 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGG 43 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccc
Confidence 3589999999999999999999999 9999999865544
No 42
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.48 E-value=6e-14 Score=152.96 Aligned_cols=37 Identities=27% Similarity=0.443 Sum_probs=33.4
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g 124 (647)
++||+|||||+||++||+.|++.| +|+|+|+.+..+|
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG 39 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGG 39 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCC
Confidence 489999999999999999999999 9999999865443
No 43
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.48 E-value=2.4e-12 Score=136.54 Aligned_cols=147 Identities=19% Similarity=0.243 Sum_probs=90.4
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHH
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
.+|||+||||||||+++|+.|+++| +|+|+||.+..+.. ....+++..
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~-~~~g~~l~~------------------------------ 51 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSP-VRCGEGLSK------------------------------ 51 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCS-CCSCCEEET------------------------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCC-CceecccCH------------------------------
Confidence 4699999999999999999999999 99999997654321 111222210
Q ss_pred HHHhhHHHHHHHHHcCCcccc-------------CCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEE
Q 006397 166 VCTEGPDRIRELIAIGASFDR-------------GEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISV 232 (647)
Q Consensus 166 ~~~~~~~~~~~l~~~G~~~~~-------------~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i 232 (647)
..++.+++.... .+++................+. .....+...|.+.+.+. |+++
T Consensus 52 ---------~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~R~~~~~~L~~~a~~~-G~~~ 119 (397)
T 3oz2_A 52 ---------GILNEADIKADRSFIANEVKGARIYGPSEKRPIILQSEKAGNEVGYV--LERDKFDKHLAALAAKA-GADV 119 (397)
T ss_dssp ---------HHHHHTTCCCCTTTEEEEESEEEEECTTCSSCEEEECSSSSCCCEEE--ECHHHHHHHHHHHHHHH-TCEE
T ss_pred ---------HHHHHcCCCchhhhhhcccceEEEEeCCCceEeeccccccCCceeEE--EEHHHHHHHHHHHHHhc-CcEE
Confidence 001112221110 0011000000000000000000 12356777888888874 9999
Q ss_pred EcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 233 FEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 233 ~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
+.++.|+++..+ ++ ++.++.... +++..+++|+.||.|+|..+.
T Consensus 120 ~~~~~v~~~~~~-~~---~~~~v~~~~--~~~~~~~~a~~vIgAdG~~S~ 163 (397)
T 3oz2_A 120 WVKSPALGVIKE-NG---KVAGAKIRH--NNEIVDVRAKMVIAADGFESE 163 (397)
T ss_dssp ESSCCEEEEEEE-TT---EEEEEEEEE--TTEEEEEEEEEEEECCCTTCH
T ss_pred eeeeeeeeeeec-cc---eeeeeeecc--cccceEEEEeEEEeCCccccH
Confidence 999999999887 45 677776653 567778999999999998774
No 44
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.48 E-value=6.5e-14 Score=151.08 Aligned_cols=50 Identities=22% Similarity=0.194 Sum_probs=37.6
Q ss_pred CCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccccC
Q 006397 228 PNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIY 284 (647)
Q Consensus 228 ~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~ 284 (647)
.+++++.+++|+.+..+. . . +.+.+..+++...+.+|.+|+|||+.....
T Consensus 70 ~~i~~~~~~~V~~id~~~-~---~---~~~~~~~~~~~~~~~yd~lVIATGs~p~~p 119 (437)
T 4eqs_A 70 KQITVKTYHEVIAINDER-Q---T---VSVLNRKTNEQFEESYDKLILSPGASANSL 119 (437)
T ss_dssp HCCEEEETEEEEEEETTT-T---E---EEEEETTTTEEEEEECSEEEECCCEEECCC
T ss_pred cCCEEEeCCeEEEEEccC-c---E---EEEEeccCCceEEEEcCEEEECCCCccccc
Confidence 389999999999997653 2 2 334444567777899999999999877544
No 45
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.48 E-value=6.4e-14 Score=153.45 Aligned_cols=46 Identities=20% Similarity=0.253 Sum_probs=36.1
Q ss_pred cceeEeCCCCcccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHH
Q 006397 436 CGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSID 490 (647)
Q Consensus 436 ~GGi~vD~~~~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~ 490 (647)
.|+|.||++++|++|++||+|||+ ++. . ....|.-.|++|+.++..
T Consensus 305 ~G~I~Vd~~~~t~~~~IyA~GD~~-~~~----~----l~~~A~~~g~~aa~~i~g 350 (490)
T 1fec_A 305 NGAIKVDAYSKTNVDNIYAIGDVT-DRV----M----LTPVAINEGAAFVDTVFA 350 (490)
T ss_dssp TSCBCCCTTCBCSSTTEEECGGGG-CSC----C----CHHHHHHHHHHHHHHHHS
T ss_pred CCCEEECCCCccCCCCEEEEeccC-CCc----c----CHHHHHHHHHHHHHHhcC
Confidence 477999999999999999999997 332 1 234567778889888764
No 46
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.45 E-value=8.9e-14 Score=145.43 Aligned_cols=130 Identities=13% Similarity=0.068 Sum_probs=79.4
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHHH
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVV 166 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~ 166 (647)
.+||+|||||++|+++|+.|+++| +|+|+|+.+..+|......-... +..+..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~----------------------~~~~~~---- 56 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLH----------------------LFSPAG---- 56 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCB----------------------CSSCGG----
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcE----------------------ecCchh----
Confidence 589999999999999999999999 99999998765543211000000 000000
Q ss_pred HHhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCC
Q 006397 167 CTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLD 246 (647)
Q Consensus 167 ~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~ 246 (647)
....+....+. .. ........+...+.+.+.+. |++++.++.|+++..++
T Consensus 57 ------------~~~~~~~~~~~--------~~--------~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~v~~i~~~~- 106 (357)
T 4a9w_A 57 ------------WSSIPGWPMPA--------SQ--------GPYPARAEVLAYLAQYEQKY-ALPVLRPIRVQRVSHFG- 106 (357)
T ss_dssp ------------GSCCSSSCCCC--------CS--------SSSCBHHHHHHHHHHHHHHT-TCCEECSCCEEEEEEET-
T ss_pred ------------hhhCCCCCCCC--------Cc--------cCCCCHHHHHHHHHHHHHHc-CCEEEcCCEEEEEEECC-
Confidence 00000000000 00 00012346667777777764 99999999999998763
Q ss_pred CCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 247 GPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 247 g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
+ .+.+| ...+| .+.+|.||+|||.++.
T Consensus 107 ~---~~~~v---~~~~g---~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 107 E---RLRVV---ARDGR---QWLARAVISATGTWGE 133 (357)
T ss_dssp T---EEEEE---ETTSC---EEEEEEEEECCCSGGG
T ss_pred C---cEEEE---EeCCC---EEEeCEEEECCCCCCC
Confidence 3 33223 23444 6899999999997654
No 47
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.45 E-value=1e-13 Score=150.56 Aligned_cols=33 Identities=27% Similarity=0.471 Sum_probs=31.3
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
++||+|||||+||+++|+.|++.| +|+|+|+..
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 36 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKGN 36 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 589999999999999999999999 999999983
No 48
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.44 E-value=3e-13 Score=151.75 Aligned_cols=36 Identities=14% Similarity=0.193 Sum_probs=32.3
Q ss_pred ccccEEEECCcHHHHHHHHHHHhc--C-CeEEEEecCCC
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKH--G-TVAVITKAEPH 122 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~--G-~V~vlEk~~~~ 122 (647)
...||+|||||+||++||+.|++. | +|+|+|+.+..
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 73 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYI 73 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 347999999999999999999998 7 99999998753
No 49
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.44 E-value=5.4e-14 Score=146.09 Aligned_cols=51 Identities=18% Similarity=0.118 Sum_probs=40.0
Q ss_pred cceeE-eCCCCcccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhhc
Q 006397 436 CGGVR-AGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 436 ~GGi~-vD~~~~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
.|.|. +|..++|++||+||+|||++ +.. .....|+..|+.||.++.+++++
T Consensus 285 ~G~i~v~~~~~~t~~~~vya~GD~~~-~~~-------~~~~~A~~~g~~aa~~i~~~l~~ 336 (338)
T 3itj_A 285 AGYIKTVPGSSLTSVPGFFAAGDVQD-SKY-------RQAITSAGSGCMAALDAEKYLTS 336 (338)
T ss_dssp TSCBCCCTTSSBCSSTTEEECGGGGC-SSC-------CCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcEEEcCcccccCCCCEEEeeccCC-CCc-------cceeeehhhhHHHHHHHHHHHhc
Confidence 46677 48889999999999999983 211 23577889999999999988753
No 50
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.44 E-value=4e-13 Score=146.12 Aligned_cols=33 Identities=39% Similarity=0.579 Sum_probs=31.5
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
++||+|||||++|+++|+.|++.| +|+|+|+..
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA 37 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 589999999999999999999999 999999984
No 51
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.43 E-value=5.1e-15 Score=162.34 Aligned_cols=35 Identities=31% Similarity=0.452 Sum_probs=32.6
Q ss_pred cccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 86 ~~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..+|||+|||||+||++||+.|++.| +|+|+|++.
T Consensus 6 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 6 VINVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 34699999999999999999999999 999999976
No 52
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.42 E-value=2.2e-14 Score=156.86 Aligned_cols=37 Identities=32% Similarity=0.453 Sum_probs=33.4
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCC
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHE 123 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~ 123 (647)
.++||+|||||++|+++|+.|++.| +|+|+|+.+..+
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~G 41 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLG 41 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcC
Confidence 4689999999999999999999999 999999966544
No 53
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.42 E-value=1.2e-13 Score=141.89 Aligned_cols=51 Identities=24% Similarity=0.272 Sum_probs=41.9
Q ss_pred cceeEeCCCCcccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhhc
Q 006397 436 CGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 436 ~GGi~vD~~~~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
.|.|.||++++|++||+||+|||+..+ -.....|+..|+.||.++.+++.+
T Consensus 263 ~g~i~vd~~~~t~~~~v~a~GD~~~~~--------~~~~~~A~~~g~~aa~~i~~~l~~ 313 (315)
T 3r9u_A 263 GGQVSVDLKMQTSVAGLFAAGDLRKDA--------PKQVICAAGDGAVAALSAMAYIES 313 (315)
T ss_dssp TSCBCCCTTCBCSSTTEEECGGGBTTC--------CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEeCCCcccCCCCEEEeecccCCc--------hhhhhhHHhhHHHHHHHHHHHHHh
Confidence 478999999999999999999997211 134677889999999999988753
No 54
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.42 E-value=2.1e-12 Score=130.97 Aligned_cols=144 Identities=21% Similarity=0.277 Sum_probs=98.9
Q ss_pred ccccEEEECCcHHHHHHHHHHHhc-C-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHH
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKH-G-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVR 164 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~-G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~ 164 (647)
.++||+|||||++|+++|+.|+++ | +|+||||.+..++.+.. .+++..... ..
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~-~~~~~~~~~-------------------~~----- 92 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWL-GGQLFSAMI-------------------VR----- 92 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTC-CSTTCCCEE-------------------EE-----
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceec-CCcchHHHH-------------------cC-----
Confidence 468999999999999999999997 9 99999999876554432 222211000 00
Q ss_pred HHHHhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEec
Q 006397 165 VVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTT 244 (647)
Q Consensus 165 ~~~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~ 244 (647)
....+++.++|++|... +.+.. ......+...|.+.+.+..|+++++++.|+++..+
T Consensus 93 ------~~~~~~l~~~G~~~~~~--~~~~~---------------~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~ 149 (284)
T 1rp0_A 93 ------KPAHLFLDEIGVAYDEQ--DTYVV---------------VKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK 149 (284)
T ss_dssp ------TTTHHHHHHHTCCCEEC--SSEEE---------------ESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEE
T ss_pred ------cHHHHHHHHcCCCcccC--CCEEE---------------ecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEec
Confidence 00134666778887642 11110 01234677788888876569999999999999986
Q ss_pred CCCCCceEEEEEEEec---------CCCeEEEEEcCeEEECCCcccc
Q 006397 245 LDGPDAVCHGVDTLNV---------ETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 245 ~~g~~~~v~Gv~~~~~---------~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
++ ++.||.+.+. .+++...+.||.||+|+|+.+.
T Consensus 150 -~~---~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~ 192 (284)
T 1rp0_A 150 -GN---RVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGP 192 (284)
T ss_dssp -TT---EEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSST
T ss_pred -CC---eEEEEEEeccccccccCccccCceEEEECCEEEECCCCchH
Confidence 44 7888877531 1134457999999999998863
No 55
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.42 E-value=1.4e-13 Score=140.15 Aligned_cols=49 Identities=20% Similarity=0.173 Sum_probs=40.3
Q ss_pred c-eeEeCCCCcccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhhc
Q 006397 437 G-GVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 437 G-Gi~vD~~~~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
| .|.||.+++|++|||||+|||+ +.. .....|+..|+.||.++.+++..
T Consensus 244 G~~i~vd~~~~t~~~~vya~GD~~-~~~--------~~~~~A~~~g~~aa~~i~~~l~~ 293 (297)
T 3fbs_A 244 GSTIVTDPMKQTTARGIFACGDVA-RPA--------GSVALAVGDGAMAGAAAHRSILF 293 (297)
T ss_dssp EEEECCCTTCBCSSTTEEECSGGG-CTT--------CCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CceEEeCCCCccCCCCEEEEeecC-Cch--------HHHHHHHHhHHHHHHHHHHHHhh
Confidence 5 6999999999999999999998 221 24567888999999999888743
No 56
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.42 E-value=2.7e-12 Score=131.65 Aligned_cols=149 Identities=16% Similarity=0.240 Sum_probs=101.4
Q ss_pred ccccEEEECCcHHHHHHHHHHHhc--C-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHH
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKH--G-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETV 163 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~--G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~ 163 (647)
.++||+|||||++|+++|+.|+++ | +|+|||+....+|... ..+...... ..
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~-~~g~~~~~~-------------------~~----- 132 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAW-LGGQLFSAM-------------------VM----- 132 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTT-CCBTTCCCE-------------------EE-----
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccc-cCCccchhh-------------------hc-----
Confidence 469999999999999999999997 8 9999999887655432 111110000 00
Q ss_pred HHHHHhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEe
Q 006397 164 RVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLT 243 (647)
Q Consensus 164 ~~~~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~ 243 (647)
......++.++|++|... |.+.. .. ....+...|.+.+.+.+|+++++++.|++|+.
T Consensus 133 ------~~~~~~~L~~~Gv~~~~~--G~~~~----------~~-----~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~ 189 (344)
T 3jsk_A 133 ------RKPADVFLDEVGVPYEDE--GDYVV----------VK-----HAALFTSTVLSKVLQRPNVKLFNATTVEDLIT 189 (344)
T ss_dssp ------ETTTHHHHHHHTCCCEEC--SSEEE----------ES-----CHHHHHHHHHHHHHTCTTEEEEETEEEEEEEE
T ss_pred ------chHHHHHHHHcCCccccc--CCeEE----------Ee-----cHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEe
Confidence 012255777888887643 22111 10 13467788888888766999999999999998
Q ss_pred cCCC---------------CCceEEEEEEEec---CCC------eEEEEEcCeEEECCCccccc
Q 006397 244 TLDG---------------PDAVCHGVDTLNV---ETQ------EVVRFISKVTLLASGGAGHI 283 (647)
Q Consensus 244 ~~~g---------------~~~~v~Gv~~~~~---~~G------~~~~i~A~~VVlAtGg~~~~ 283 (647)
++++ +..+|.||++... ..| +..+|+|+.||+|||+.+.+
T Consensus 190 ~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v 253 (344)
T 3jsk_A 190 RKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPF 253 (344)
T ss_dssp EEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSS
T ss_pred cCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchh
Confidence 6420 1137899987531 112 34689999999999988854
No 57
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.42 E-value=2.2e-13 Score=147.68 Aligned_cols=33 Identities=30% Similarity=0.498 Sum_probs=31.5
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
++||+|||||++|+++|+.|++.| +|+|+|++.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE 37 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC
Confidence 589999999999999999999999 999999974
No 58
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.42 E-value=3.3e-13 Score=146.83 Aligned_cols=33 Identities=33% Similarity=0.560 Sum_probs=31.8
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
++||+|||||+||++||..|++.| +|+|+|+..
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 589999999999999999999999 999999987
No 59
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.42 E-value=4.1e-13 Score=146.56 Aligned_cols=38 Identities=34% Similarity=0.427 Sum_probs=34.1
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g 124 (647)
.++||+|||||++|+++|+.|++.| +|+|+|+.+..+|
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG 43 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGG 43 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCC
Confidence 4689999999999999999999999 9999999865443
No 60
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.40 E-value=1.9e-12 Score=143.80 Aligned_cols=66 Identities=12% Similarity=0.097 Sum_probs=56.9
Q ss_pred cHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 212 TGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 212 ~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
....+...|.+.+.+. |++|+++++|++|..+ ++ ++.||.+.+..+|+...|+|+.||+|+|.++.
T Consensus 168 d~~~l~~~L~~~a~~~-G~~i~~~~~V~~l~~~-~g---~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~ 233 (561)
T 3da1_A 168 DDARLTLEIMKEAVAR-GAVALNYMKVESFIYD-QG---KVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVD 233 (561)
T ss_dssp CHHHHHHHHHHHHHHT-TCEEEESEEEEEEEEE-TT---EEEEEEEEETTTCCEEEEEEEEEEECCGGGHH
T ss_pred cHHHHHHHHHHHHHHc-CCEEEcCCEEEEEEEc-CC---eEEEEEEEEcCCCceEEEECCEEEECCCcchH
Confidence 3567888899988885 9999999999999987 55 78999998866787778999999999999874
No 61
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.40 E-value=9e-13 Score=143.79 Aligned_cols=35 Identities=23% Similarity=0.169 Sum_probs=29.8
Q ss_pred cccEEEECCcHHHHHHHHHHHhc--C-CeEEEEecCCC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKH--G-TVAVITKAEPH 122 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~--G-~V~vlEk~~~~ 122 (647)
..||+|||||+||++||+.|+++ | +|+|+|+.+..
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~ 40 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRI 40 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcc
Confidence 36999999999999999999998 7 99999998753
No 62
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.40 E-value=7e-13 Score=143.74 Aligned_cols=35 Identities=29% Similarity=0.331 Sum_probs=31.7
Q ss_pred cccEEEECCcHHHHHHHHHHHhc--C-CeEEEEecCCC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKH--G-TVAVITKAEPH 122 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~--G-~V~vlEk~~~~ 122 (647)
.+||+|||||+||+++|+.|++. | +|+|+|+.+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~ 40 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWV 40 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCcc
Confidence 37999999999999999999998 6 99999998753
No 63
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.40 E-value=4e-13 Score=147.61 Aligned_cols=33 Identities=30% Similarity=0.317 Sum_probs=31.6
Q ss_pred cccEEEECCcHHHHHHHHHHHhc---C-CeEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKH---G-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~---G-~V~vlEk~~ 120 (647)
++||+|||||++|++||+.|++. | +|+|||+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 48999999999999999999999 9 999999987
No 64
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.39 E-value=2.2e-12 Score=142.36 Aligned_cols=40 Identities=18% Similarity=0.196 Sum_probs=35.1
Q ss_pred ccccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006397 85 SVKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 85 ~~~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g 124 (647)
....+||+|||||++|+++|+.|++.| +|+|||+....+|
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG 80 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGG 80 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSC
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 345699999999999999999999999 9999999874443
No 65
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.39 E-value=8.2e-14 Score=153.07 Aligned_cols=33 Identities=36% Similarity=0.654 Sum_probs=31.5
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
++||+|||||++|++||+.|++.| +|+|+|+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 489999999999999999999999 999999985
No 66
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.37 E-value=8.9e-13 Score=139.61 Aligned_cols=49 Identities=20% Similarity=0.196 Sum_probs=37.4
Q ss_pred ceeEeCCCCcccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHH
Q 006397 437 GGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSID 490 (647)
Q Consensus 437 GGi~vD~~~~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~ 490 (647)
+||.||++++|+.|++||+|||+ ...+. .. .....|.-.|+.||.+++.
T Consensus 245 ~gi~vd~~~~t~~~~IyA~GD~a--~~~~~--~~-~~~~~A~~qg~~aa~~i~g 293 (385)
T 3klj_A 245 RGILVNDHMETSIKDIYACGDVA--EFYGK--NP-GLINIANKQGEVAGLNACG 293 (385)
T ss_dssp SSEEECTTCBCSSTTEEECGGGE--EETTB--CC-CCHHHHHHHHHHHHHHHTT
T ss_pred CCEEECCCcccCCCCEEEEEeeE--ecCCC--cc-cHHHHHHHHHHHHHHHhcC
Confidence 67999999999999999999997 33221 11 1346688889999988875
No 67
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.37 E-value=1.1e-13 Score=150.29 Aligned_cols=35 Identities=23% Similarity=0.421 Sum_probs=31.9
Q ss_pred ccEEEECCcHHHHHHHHHHHhc--C-CeEEEEecCCCC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKH--G-TVAVITKAEPHE 123 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~--G-~V~vlEk~~~~~ 123 (647)
.||+|||||+||++||+.|++. | +|+|+|+.+..+
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g 40 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVG 40 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCc
Confidence 5999999999999999999998 7 999999987543
No 68
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.37 E-value=1.7e-12 Score=136.33 Aligned_cols=182 Identities=20% Similarity=0.172 Sum_probs=100.9
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC-CCCCccccccCCeeeecC-CCCCHHH--------HHHHHHHh-cC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE-PHESNTNYAQGGVSAVLC-PSDSVES--------HMQDTIVA-GA 155 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~-~~~g~s~~a~Ggi~~~~~-~~d~~~~--------~~~~~~~~-g~ 155 (647)
++||+|||||++|+++|+.|+++| +|+||||.. ...+.|..+.|.+..... +...... .+.+.... +.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYEYCAARGV 83 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSCSTTSSSCCEECCCCSSCTTCHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCccCcCCccccccCccCCCCCHhHHHHHHHHHHHHHHHHHcCC
Confidence 589999999999999999999999 999999985 555566555554432221 1111111 11111110 00
Q ss_pred CC---------CCHHHHHHHHHhhHHHHHHHHHcCCc-cccCCCCcccccccCCcccccee-ecC--CCcHHHHHHHHHH
Q 006397 156 YL---------CDDETVRVVCTEGPDRIRELIAIGAS-FDRGEDGNLHLAREGGHSHHRIV-HAA--DMTGREIERALLE 222 (647)
Q Consensus 156 ~~---------~~~~~~~~~~~~~~~~~~~l~~~G~~-~~~~~~g~~~~~~~gg~~~~r~~-~~~--~~~g~~~~~~L~~ 222 (647)
.. .+... .........++...|++ +.......+ ............. .+. ......+...|.+
T Consensus 84 ~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~ 158 (369)
T 3dme_A 84 PHQRLGKLIVATSDAE----ASQLDSIARRAGANGVDDLQHIDGAAA-RRLEPALHCTAALVSPSTGIVDSHALMLAYQG 158 (369)
T ss_dssp CEECCCEEEEECSHHH----HTTHHHHHHHHHHTTCCCCEEEEHHHH-HHHCTTCCCSEEEEETTCEEECHHHHHHHHHH
T ss_pred CcccCCEEEEecCHHH----HHHHHHHHHHHHHcCCCceeecCHHHH-HHhCCCceeeeeeECCCCEEECHHHHHHHHHH
Confidence 00 00111 11112233444455654 321100000 0000000000001 111 1235678889999
Q ss_pred HHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 223 AVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 223 ~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
.+++. |++|+++++|++|..++++ .+ .|.+ .+|+...+.||.||+|+|+++.
T Consensus 159 ~~~~~-Gv~i~~~~~v~~i~~~~~~---~~-~v~~---~~g~~~~~~a~~VV~A~G~~s~ 210 (369)
T 3dme_A 159 DAESD-GAQLVFHTPLIAGRVRPEG---GF-ELDF---GGAEPMTLSCRVLINAAGLHAP 210 (369)
T ss_dssp HHHHT-TCEEECSCCEEEEEECTTS---SE-EEEE---CTTSCEEEEEEEEEECCGGGHH
T ss_pred HHHHC-CCEEECCCEEEEEEEcCCc---eE-EEEE---CCCceeEEEeCEEEECCCcchH
Confidence 99885 9999999999999987443 22 3433 4565457999999999999874
No 69
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.36 E-value=3.2e-13 Score=139.78 Aligned_cols=52 Identities=21% Similarity=0.140 Sum_probs=41.8
Q ss_pred cceeEeCCCCcccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhhcc
Q 006397 436 CGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKST 495 (647)
Q Consensus 436 ~GGi~vD~~~~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~~ 495 (647)
.|+|.||++++|++|++||+|||+ +.. . .....|...|+.||.++..++...
T Consensus 263 ~g~i~vd~~~~t~~~~vya~GD~~-~~~---~----~~~~~A~~~g~~aa~~i~~~l~~~ 314 (325)
T 2q7v_A 263 DGYVDVRDEIYTNIPMLFAAGDVS-DYI---Y----RQLATSVGAGTRAAMMTERQLAAL 314 (325)
T ss_dssp TSCBCCBTTTBCSSTTEEECSTTT-CSS---C----CCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CccEecCCCCccCCCCEEEeeccc-Ccc---H----HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 478999999999999999999997 221 1 135668888999999999887553
No 70
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.36 E-value=4.7e-11 Score=122.98 Aligned_cols=49 Identities=22% Similarity=0.268 Sum_probs=39.9
Q ss_pred ceeEeCCCCcccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhh
Q 006397 437 GGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKK 493 (647)
Q Consensus 437 GGi~vD~~~~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~ 493 (647)
|+|.||++++|++||+||+|||+ ++. . .....|...|+.||.++.+++.
T Consensus 268 g~i~vd~~~~t~~~~vya~GD~~-~~~---~----~~~~~A~~~g~~aa~~i~~~l~ 316 (319)
T 3cty_A 268 GYIVVDSRQRTSVPGVYAAGDVT-SGN---F----AQIASAVGDGCKAALSLYSDSI 316 (319)
T ss_dssp SCBCCCTTCBCSSTTEEECSTTB-TTC---C----CCHHHHHHHHHHHHHHHHHHHT
T ss_pred ccEeCCCCCccCCCCEEEeeccc-Ccc---h----hhHHHHHHHHHHHHHHHHHHhh
Confidence 88999999999999999999997 321 1 1345688889999999988774
No 71
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.36 E-value=1.5e-12 Score=134.77 Aligned_cols=55 Identities=20% Similarity=0.225 Sum_probs=45.4
Q ss_pred ceeEeCCCCcccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhh
Q 006397 437 GGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKK 493 (647)
Q Consensus 437 GGi~vD~~~~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~ 493 (647)
++|.+|..++|++||||||||++ +.++|.+|.|-. +..++..|++||+.|.+|++
T Consensus 271 ~~iv~~~~~~t~vpGv~aaGDaa-~~v~g~~rmGp~-~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 271 HDVVIHSGAYAGVDNMYFAGMEV-AELDGLNRMGPT-FGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp HHHHHHCEECTTSBTEEECTHHH-HHHHTCCBCCSC-CHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEECCCeEECCCCEEEEchHh-ccccCCCcCchH-HHHHHHHHHHHHHHHHHHhc
Confidence 45667888899999999999998 678888887642 44567789999999999874
No 72
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.36 E-value=2.4e-12 Score=143.76 Aligned_cols=34 Identities=15% Similarity=0.178 Sum_probs=30.9
Q ss_pred ccEEEECCcHHHHHHHHHHHhc--C-CeEEEEecCCC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKH--G-TVAVITKAEPH 122 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~--G-~V~vlEk~~~~ 122 (647)
.||+|||||+||++||+.|++. | +|+|+|+.+..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 4899999999999999999998 6 99999998754
No 73
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.35 E-value=6.3e-13 Score=136.50 Aligned_cols=50 Identities=22% Similarity=0.266 Sum_probs=40.1
Q ss_pred cceeEeCCCCcccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhh
Q 006397 436 CGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKK 493 (647)
Q Consensus 436 ~GGi~vD~~~~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~ 493 (647)
.|+|.||++++|++||+||+|||+ ++. . .....|...|+.||.++.++++
T Consensus 260 ~g~i~vd~~~~t~~~~vya~GD~~-~~~---~----~~~~~A~~~g~~aa~~i~~~l~ 309 (311)
T 2q0l_A 260 YGSIVVDFSMKTNVQGLFAAGDIR-IFA---P----KQVVCAASDGATAALSVISYLE 309 (311)
T ss_dssp TSCBCCCTTCBCSSTTEEECSTTB-TTC---C----CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEeCCccccCCCCeEEccccc-Ccc---h----HHHHHHHHhHHHHHHHHHHHHh
Confidence 488999999999999999999997 321 1 2345677889999999988764
No 74
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.35 E-value=6.1e-13 Score=149.54 Aligned_cols=34 Identities=38% Similarity=0.507 Sum_probs=31.5
Q ss_pred cccccEEEECCcHHHHHHHHHHHhcC-CeEEEEec
Q 006397 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 86 ~~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~ 119 (647)
...+||+|||||+||++||+.|++.| +|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 34699999999999999999999999 99999984
No 75
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.35 E-value=3.3e-13 Score=138.61 Aligned_cols=51 Identities=24% Similarity=0.267 Sum_probs=41.4
Q ss_pred cceeEeCCCCcccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhhc
Q 006397 436 CGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 436 ~GGi~vD~~~~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
.|+|.||++++|++||+||+|||+ +... .....|+..|+.||.++.+++..
T Consensus 256 ~g~i~vd~~~~t~~~~vya~GD~~-~~~~-------~~~~~A~~~g~~aa~~i~~~l~~ 306 (310)
T 1fl2_A 256 MGEIIIDAKCETNVKGVFAAGDCT-TVPY-------KQIIIATGEGAKASLSAFDYLIR 306 (310)
T ss_dssp TSCBCCCTTCBCSSTTEEECSTTB-SCSS-------CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEcCCCCccCCCCEEEeeccc-CCcc-------hhhhhhHhhHHHHHHHHHHHHHH
Confidence 478999999999999999999997 2221 23567888999999999988754
No 76
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.35 E-value=2.6e-13 Score=147.30 Aligned_cols=33 Identities=15% Similarity=0.180 Sum_probs=30.8
Q ss_pred ccEEEECCcHHHHHHHHHHHhc--C-CeEEEEecCC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKH--G-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~--G-~V~vlEk~~~ 121 (647)
+||+|||||++|+++|..|++. | +|+|+|+.+.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~ 36 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDN 36 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 5899999999999999999998 8 9999999874
No 77
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.34 E-value=1.3e-11 Score=130.64 Aligned_cols=180 Identities=18% Similarity=0.125 Sum_probs=105.7
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHH------HHHHHHHHh-cC---
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVE------SHMQDTIVA-GA--- 155 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~------~~~~~~~~~-g~--- 155 (647)
.++||+|||||++|+++|+.|+++| +|+||||....+++|..+.|.+........... ..+.+.... +.
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~~~~gas~~~~g~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~ 83 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRFIGSGSTFRCGTGIRQQFNDEANVRVMKRSVELWKKYSEEYGFSFK 83 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSHHHHCCCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCCccccccCeeeecCCChHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 4689999999999999999999999 999999998777777777766654332211100 011111111 00
Q ss_pred --C----CCCHHHHHHHHHhhHHHHHHHHHcCCccccCCCCcccccccCC---cccc-ceeecC--CCcHHHHHHHHHHH
Q 006397 156 --Y----LCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGG---HSHH-RIVHAA--DMTGREIERALLEA 223 (647)
Q Consensus 156 --~----~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg---~~~~-r~~~~~--~~~g~~~~~~L~~~ 223 (647)
+ ..++.... ......+++..+|+++.......+. ..... .... ....+. ...+..+...|.+.
T Consensus 84 ~~g~l~~~~~~~~~~----~~~~~~~~~~~~g~~~~~l~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 158 (382)
T 1y56_B 84 QTGYLFLLYDDEEVK----TFKRNIEIQNKFGVPTKLITPEEAK-EIVPLLDISEVIAASWNPTDGKADPFEATTAFAVK 158 (382)
T ss_dssp CCCEEEEECSHHHHH----HHHHHHHHHHHTTCCCEEECHHHHH-HSSTTCCCTTCCEEEEETTCCEECHHHHHHHHHHH
T ss_pred ccceEEEEeCHHHHH----HHHHHHHHHHhcCCCcEEeCHHHHH-HhCCCCCcccceEEEEcCCCeeECHHHHHHHHHHH
Confidence 0 00111111 1122344555667654321110000 00000 0000 011111 11356788889999
Q ss_pred HHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 224 VVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 224 ~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
+++. |++++++++|++|..+ ++ ++.||.+ .+| .+.|+.||+|+|+++.
T Consensus 159 ~~~~-Gv~i~~~~~v~~i~~~-~~---~v~gv~~---~~g---~i~a~~VV~A~G~~s~ 206 (382)
T 1y56_B 159 AKEY-GAKLLEYTEVKGFLIE-NN---EIKGVKT---NKG---IIKTGIVVNATNAWAN 206 (382)
T ss_dssp HHHT-TCEEECSCCEEEEEES-SS---BEEEEEE---TTE---EEECSEEEECCGGGHH
T ss_pred HHHC-CCEEECCceEEEEEEE-CC---EEEEEEE---CCc---EEECCEEEECcchhHH
Confidence 9875 9999999999999886 44 5767654 344 5999999999998873
No 78
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.33 E-value=9.3e-11 Score=138.11 Aligned_cols=38 Identities=29% Similarity=0.413 Sum_probs=34.4
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g 124 (647)
..+||+|||||+||++||+.|++.| +|+|+|+.+..+|
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG 165 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGG 165 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSG
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCc
Confidence 4689999999999999999999999 9999999876544
No 79
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.33 E-value=2.5e-11 Score=129.34 Aligned_cols=182 Identities=16% Similarity=0.121 Sum_probs=106.0
Q ss_pred ccccccEEEECCcHHHHHHHHHHHh-cC--CeEEEEecCCCCCccccccCCeeeecCCCCCHH------HHHHHHHHhcC
Q 006397 85 SVKYFDFSVIGSGVAGLCYALEVAK-HG--TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVE------SHMQDTIVAGA 155 (647)
Q Consensus 85 ~~~~~DVvIIGgG~AGl~aA~~la~-~G--~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~------~~~~~~~~~g~ 155 (647)
.+.++||+|||||++|+++|+.|++ +| +|+||||....+|+|..+.|.+........... ..+.+......
T Consensus 18 ~~~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~~~~gas~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 97 (405)
T 2gag_B 18 PKKSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWLAGGNMARNTTIIRSNYLWDESAGIYEKSLKLWEQLPEDLE 97 (405)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSSTTCSGGGTSCCCBCCCCSSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCCCCCCcccccCceeeecCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 3457999999999999999999999 88 899999999777777777766654332211110 01111111100
Q ss_pred CC------------CCHHHHHHHHHhhHHHHHHHHHcCCccccCCCCccc--ccccCC------ccccceeec--CCCcH
Q 006397 156 YL------------CDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLH--LAREGG------HSHHRIVHA--ADMTG 213 (647)
Q Consensus 156 ~~------------~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~g~~~--~~~~gg------~~~~r~~~~--~~~~g 213 (647)
.. .++.... ......+++...|+++.......+. ...... ........+ ....+
T Consensus 98 ~~~~~~~~g~l~~~~~~~~~~----~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (405)
T 2gag_B 98 YDFLFSQRGVLNLAHTLGDVR----ESVRRVEANKLNGVDAEWLDPSQVKEACPIINTSDDIRYPVMGATWQPRAGIAKH 173 (405)
T ss_dssp CCCCCBCCCEEEEECSHHHHH----HHHHHHHHHHTBTCCCEEECHHHHHHHCTTSCCSTTSSSCCCEEEEETTCBBCCH
T ss_pred CCcCEecccEEEEEcCHHHHH----HHHHHHHHHHhcCCCceEeCHHHHHhhCCCCcccccccccceeEEEeCCCccCCH
Confidence 00 0111111 1122334455566654321100000 000000 000011111 11235
Q ss_pred HHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 214 REIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 214 ~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
..+...|.+.+++. |++++++++|++|..+ ++ ++.+|.+ .+| .+.||.||+|+|+++
T Consensus 174 ~~~~~~l~~~~~~~-g~~i~~~~~v~~i~~~-~~---~~~~v~~---~~g---~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 174 DHVAWAFARKANEM-GVDIIQNCEVTGFIKD-GE---KVTGVKT---TRG---TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHHHT-TCEEECSCCEEEEEES-SS---BEEEEEE---TTC---CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHC-CCEEEcCCeEEEEEEe-CC---EEEEEEe---CCc---eEECCEEEECCchhH
Confidence 67888899999875 9999999999999886 44 5666654 345 589999999999876
No 80
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.33 E-value=2.1e-12 Score=140.65 Aligned_cols=34 Identities=32% Similarity=0.487 Sum_probs=31.9
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
.+||+|||||++|+++|+.|++.| +|+|+|+...
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~ 38 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGTI 38 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSST
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 589999999999999999999999 9999999843
No 81
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.32 E-value=2.5e-11 Score=123.82 Aligned_cols=147 Identities=19% Similarity=0.261 Sum_probs=99.0
Q ss_pred ccccEEEECCcHHHHHHHHHHHhc--C-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHH
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKH--G-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETV 163 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~--G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~ 163 (647)
.++||+|||||++|+++|+.|++. | +|+|+|+....+|.+... +...... ..
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~-g~~~~~~-------------------~~----- 118 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLG-GQLFSAM-------------------VM----- 118 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCC-GGGCCCE-------------------EE-----
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccccccccc-Ccccchh-------------------hh-----
Confidence 468999999999999999999998 9 999999988776544321 1111000 00
Q ss_pred HHHHHhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEe
Q 006397 164 RVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLT 243 (647)
Q Consensus 164 ~~~~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~ 243 (647)
......++.++|+++... +.+.... ....+...|.+.+.+.+|+++++++.|++|+.
T Consensus 119 ------~~~~~~~L~~~Gv~~~~~--g~~~~~~---------------~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~ 175 (326)
T 2gjc_A 119 ------RKPAHLFLQELEIPYEDE--GDYVVVK---------------HAALFISTVLSKVLQLPNVKLFNATCVEDLVT 175 (326)
T ss_dssp ------ETTTHHHHHHTTCCCEEC--SSEEEES---------------CHHHHHHHHHHHHHTSTTEEEETTEEEEEEEE
T ss_pred ------hhHHHHHHHhhCcccccC--CCeEEEc---------------chHHHHHHHHHHHHHhcCcEEEecceeeeeee
Confidence 011245677888888653 2222110 23467788888888767999999999999998
Q ss_pred cCCC--CCceEEEEEEEec---CCC------eEEEEEc---------------CeEEECCCccc
Q 006397 244 TLDG--PDAVCHGVDTLNV---ETQ------EVVRFIS---------------KVTLLASGGAG 281 (647)
Q Consensus 244 ~~~g--~~~~v~Gv~~~~~---~~G------~~~~i~A---------------~~VVlAtGg~~ 281 (647)
+++. +..+|.||++... .+| +..+|.| +.||+|||..+
T Consensus 176 ~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~ 239 (326)
T 2gjc_A 176 RPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDG 239 (326)
T ss_dssp CCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC-
T ss_pred cccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCc
Confidence 7421 0126889987421 112 3457899 99999999666
No 82
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.32 E-value=1.8e-11 Score=136.25 Aligned_cols=183 Identities=15% Similarity=0.113 Sum_probs=105.3
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCC--CCCHH---HHHH---HHHHhcCCC
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCP--SDSVE---SHMQ---DTIVAGAYL 157 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~--~d~~~---~~~~---~~~~~g~~~ 157 (647)
.++||+|||||++|+++|+.|+++| +|+|||+....+|.|..+.|-+...... ..... ..+. ........+
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~GtS~~s~gli~~g~ryl~~~~~~l~~~~~~e~~~l~~~~~~~ 110 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEGTSSRSTKLVHGGIRYLKTFDVEVVADTVGERAVVQGIAPHI 110 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSGGGSSCSEECCCGGGGGGTCHHHHHHHHHHHHHHHHHCTTS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccccccccccchhhccChHHHHHHHHHHHHHHHhCccc
Confidence 3589999999999999999999999 9999999988878777765433221110 00110 0000 001111110
Q ss_pred ------------------CCHHHHHHHHHhhHHHHHHHHH---cCCccccCCCCcc-----ccc---ccCCccccceeec
Q 006397 158 ------------------CDDETVRVVCTEGPDRIRELIA---IGASFDRGEDGNL-----HLA---REGGHSHHRIVHA 208 (647)
Q Consensus 158 ------------------~~~~~~~~~~~~~~~~~~~l~~---~G~~~~~~~~g~~-----~~~---~~gg~~~~r~~~~ 208 (647)
.... .........+++.. .+........... .+. ..++..++.
T Consensus 111 ~~~~~~l~~~~~~~g~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~l~~~e~~~~~P~l~~~~~~gg~~~~d---- 182 (571)
T 2rgh_A 111 PKPDPMLLPIYEDEGATTFNMF----SVKVAMDLYDKLANVTGTKYENYTLTPEEVLEREPFLKKEGLKGAGVYLD---- 182 (571)
T ss_dssp SEECCEEEEEESSSSSCSCCHH----HHHHHHHHHHHHHTCSSSTTCCEEECHHHHHHHCTTSCCTTEEEEEEECC----
T ss_pred ccccCceEEeecccccccccHH----HHHHHHHHHHHHhhhhccCCCcEEECHHHHHHhCcCCchhhceEEEEecC----
Confidence 0010 01111122233321 1211110000000 000 001111111
Q ss_pred CCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 209 ADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 209 ~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
.......+...+.+.+.+. |++|+++++|++|..+ ++ +|.||.+.+..+|+...|+|+.||+|+|+++.
T Consensus 183 g~v~~~~l~~~l~~~a~~~-Ga~i~~~t~V~~l~~~-~~---~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~ 251 (571)
T 2rgh_A 183 FRNNDARLVIDNIKKAAED-GAYLVSKMKAVGFLYE-GD---QIVGVKARDLLTDEVIEIKAKLVINTSGPWVD 251 (571)
T ss_dssp EECCHHHHHHHHHHHHHHT-TCEEESSEEEEEEEEE-TT---EEEEEEEEETTTCCEEEEEBSCEEECCGGGHH
T ss_pred CeEchHHHHHHHHHHHHHc-CCeEEeccEEEEEEEe-CC---EEEEEEEEEcCCCCEEEEEcCEEEECCChhHH
Confidence 1123567788888888875 9999999999999987 45 78899888755676667999999999999874
No 83
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.32 E-value=6.5e-13 Score=145.15 Aligned_cols=34 Identities=24% Similarity=0.545 Sum_probs=31.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhc--C-CeEEEEecCCC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKH--G-TVAVITKAEPH 122 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~--G-~V~vlEk~~~~ 122 (647)
+||+|||||+||+++|+.|++. | +|+|+|+.+..
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 73 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIY 73 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCC
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 6999999999999999999996 7 99999998754
No 84
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.31 E-value=5.6e-11 Score=135.55 Aligned_cols=179 Identities=14% Similarity=0.180 Sum_probs=98.8
Q ss_pred cccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC-CCCCccccccCCeeeecCCCCCHH-HHHH-----------HHH
Q 006397 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE-PHESNTNYAQGGVSAVLCPSDSVE-SHMQ-----------DTI 151 (647)
Q Consensus 86 ~~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~-~~~g~s~~a~Ggi~~~~~~~d~~~-~~~~-----------~~~ 151 (647)
+.++||+|||||++|+++|+.|+++| +|+||||.. ..+|+|..+.|.+.......+... .++. +..
T Consensus 262 ~~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~ 341 (689)
T 3pvc_A 262 TRCDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQPAQGASGNRQGALYPLLNGKNDALETFFTSAFTFARRQYDQLL 341 (689)
T ss_dssp SCCSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSSTTCSGGGCSCEEECCCCCSSCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCccccccccccCCEEecCCCCCChHHHHHHHHHHHHHHHHHHHhh
Confidence 34689999999999999999999999 999999976 444556555555554433322221 1111 110
Q ss_pred HhcCCC-----------CCHHHHHHHHHhhHHHHHHHHHcCCccc---cCCCCcc-----cccccCCccccceeecCCCc
Q 006397 152 VAGAYL-----------CDDETVRVVCTEGPDRIRELIAIGASFD---RGEDGNL-----HLAREGGHSHHRIVHAADMT 212 (647)
Q Consensus 152 ~~g~~~-----------~~~~~~~~~~~~~~~~~~~l~~~G~~~~---~~~~g~~-----~~~~~gg~~~~r~~~~~~~~ 212 (647)
..+... .+.. ....+..+...|++.. ....... .....++...+.. ....
T Consensus 342 ~~~~~~~~~~~g~l~~~~~~~--------~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~---g~v~ 410 (689)
T 3pvc_A 342 EQGIAFDHQWCGVSQLAFDDK--------SRGKIEKMLHTQWPVEFAEAMSREQLSELAGLDCAHDGIHYPAG---GWLC 410 (689)
T ss_dssp HTTCCCCEECCCEEEECCSHH--------HHHHHHHHTTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTC---EEEC
T ss_pred hhccccccccCceEEeccCHH--------HHHHHHHHHhcCCChHHhhccCHHHHHHhcCCCcccceEEecCC---eEEC
Confidence 110000 0000 0111222223333321 0000000 0000011101100 1123
Q ss_pred HHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccccCC
Q 006397 213 GREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYP 285 (647)
Q Consensus 213 g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~ 285 (647)
+..+...|.+.+++. |++|+++++|++|..++ + .+ +|.+ .+|+ ..+.|+.||+|+|+++..+.
T Consensus 411 p~~l~~aL~~~a~~~-Gv~i~~~t~V~~l~~~~-~---~v-~V~t---~~G~-~~i~Ad~VVlAtG~~s~~l~ 473 (689)
T 3pvc_A 411 PSDLTHALMMLAQQN-GMTCHYQHELQRLKRID-S---QW-QLTF---GQSQ-AAKHHATVILATGHRLPEWE 473 (689)
T ss_dssp HHHHHHHHHHHHHHT-TCEEEESCCEEEEEECS-S---SE-EEEE---C-CC-CCEEESEEEECCGGGTTCST
T ss_pred HHHHHHHHHHHHHhC-CCEEEeCCeEeEEEEeC-C---eE-EEEe---CCCc-EEEECCEEEECCCcchhccc
Confidence 567889999999885 99999999999999874 3 22 3433 2342 14899999999999986543
No 85
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.31 E-value=1.5e-11 Score=133.28 Aligned_cols=152 Identities=16% Similarity=0.239 Sum_probs=93.9
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHH
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
.++||+|||||++|+++|+.|+++| +|+|+||.+....+.....+++.
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~------------------------------- 53 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVS------------------------------- 53 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEE-------------------------------
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCccccccccc-------------------------------
Confidence 4689999999999999999999999 99999998753211111111110
Q ss_pred HHHhhHHHHHHHHHcCCcccc------CCCCcccccccCCcc--ccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceE
Q 006397 166 VCTEGPDRIRELIAIGASFDR------GEDGNLHLAREGGHS--HHRIVHAADMTGREIERALLEAVVSDPNISVFEHHF 237 (647)
Q Consensus 166 ~~~~~~~~~~~l~~~G~~~~~------~~~g~~~~~~~gg~~--~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~ 237 (647)
...+..+|+.... ...+.......+... .+...+ ......+...|.+.+.+ .|++++.++.
T Consensus 54 --------~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~r~~l~~~L~~~a~~-~gv~i~~~~~ 122 (453)
T 3atr_A 54 --------KAHFDKLGMPYPKGEELENKINGIKLYSPDMQTVWTVNGEGF--ELNAPLYNQRVLKEAQD-RGVEIWDLTT 122 (453)
T ss_dssp --------HHHHHHTTCCCCCGGGEEEEEEEEEEECTTSSCEEEEEEEEE--EECHHHHHHHHHHHHHH-TTCEEESSEE
T ss_pred --------HHHHHHhcCCCCchHHHHhhhcceEEECCCCceEEeECCCcE--EEcHHHHHHHHHHHHHH-cCCEEEeCcE
Confidence 0111222221100 000000000000000 000000 11245678888888887 5999999999
Q ss_pred EEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccccC
Q 006397 238 AIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIY 284 (647)
Q Consensus 238 v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~ 284 (647)
|+++..+ ++ .|.||.+.+..+|+..++.|+.||.|+|..+.+.
T Consensus 123 v~~i~~~-~~---~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr 165 (453)
T 3atr_A 123 AMKPIFE-DG---YVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFR 165 (453)
T ss_dssp EEEEEEE-TT---EEEEEEEEETTTTEEEEEECSEEEECCGGGCTTG
T ss_pred EEEEEEE-CC---EEEEEEEEEcCCCceEEEEcCEEEECcCCchhhH
Confidence 9999886 45 7888887653267766899999999999988654
No 86
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.31 E-value=5.4e-12 Score=132.80 Aligned_cols=34 Identities=24% Similarity=0.312 Sum_probs=30.9
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCeEEEEecCC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHGTVAVITKAEP 121 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G~V~vlEk~~~ 121 (647)
..||+|||||+||++||..|++.|+|+|+|+...
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g~V~lie~~~~ 41 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTYEVTVIDKEPV 41 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTSEEEEECSSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcCCEEEEECCCC
Confidence 4699999999999999999998889999999764
No 87
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.31 E-value=4.1e-11 Score=136.48 Aligned_cols=177 Identities=14% Similarity=0.199 Sum_probs=99.3
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC-CCCccccccCCeeeecCCCCC-HHHHHH-------HHHHhcCC
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP-HESNTNYAQGGVSAVLCPSDS-VESHMQ-------DTIVAGAY 156 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~-~~g~s~~a~Ggi~~~~~~~d~-~~~~~~-------~~~~~g~~ 156 (647)
..+||+|||||++|+++|+.|+++| +|+||||... .+|+|..+.|.+.......+. ...+.. +.+..-..
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 350 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPV 350 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSCSTTCCSCEEECCCCCSSCHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcccccCccCCCceecCcCCCCccHHHHHHHHHHHHHHHHHHHCCC
Confidence 3489999999999999999999999 9999999754 445565555555433322221 111111 11111000
Q ss_pred ------------CCCHHHHHHHHHhhHHHHHHHHHcCCccc---cCCCCcc-----cccccCCccccceeecCCCcHHHH
Q 006397 157 ------------LCDDETVRVVCTEGPDRIRELIAIGASFD---RGEDGNL-----HLAREGGHSHHRIVHAADMTGREI 216 (647)
Q Consensus 157 ------------~~~~~~~~~~~~~~~~~~~~l~~~G~~~~---~~~~g~~-----~~~~~gg~~~~r~~~~~~~~g~~~ 216 (647)
..+.. ....+..+...|++.. ....... .....++...+.. ....+..+
T Consensus 351 ~~~~~~~g~l~~~~~~~--------~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~---g~v~p~~l 419 (676)
T 3ps9_A 351 KFDHDWCGVTQLGWDEK--------SQHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQG---GWLCPAEL 419 (676)
T ss_dssp CCCEECCCEEEECCSHH--------HHHHHHHHHTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTC---EEECHHHH
T ss_pred CcCcCcCCeeeecCCHH--------HHHHHHHHHhcCCcHHHhhhCCHHHHHHhhCCCccCCcEEecCC---eeeCHHHH
Confidence 00111 1112223333344322 0000000 0000011111110 11235678
Q ss_pred HHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccccCC
Q 006397 217 ERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYP 285 (647)
Q Consensus 217 ~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~ 285 (647)
...|.+.+++. |++|+++++|++|..+ ++ .+ +|.. .+|. ++.|+.||+|+|+++..+.
T Consensus 420 ~~aL~~~a~~~-Gv~i~~~t~V~~l~~~-~~---~v-~V~t---~~G~--~i~Ad~VVlAtG~~s~~l~ 477 (676)
T 3ps9_A 420 TRNVLELAQQQ-GLQIYYQYQLQNFSRK-DD---CW-LLNF---AGDQ--QATHSVVVLANGHQISRFS 477 (676)
T ss_dssp HHHHHHHHHHT-TCEEEESCCEEEEEEE-TT---EE-EEEE---TTSC--EEEESEEEECCGGGGGCST
T ss_pred HHHHHHHHHhC-CCEEEeCCeeeEEEEe-CC---eE-EEEE---CCCC--EEECCEEEECCCcchhccc
Confidence 89999999885 9999999999999987 44 33 3332 3444 5899999999999986544
No 88
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.30 E-value=1.9e-12 Score=134.30 Aligned_cols=51 Identities=20% Similarity=0.117 Sum_probs=40.0
Q ss_pred cceeEeCCC-CcccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhhc
Q 006397 436 CGGVRAGLQ-GETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 436 ~GGi~vD~~-~~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
.|.|.||++ ++|++|||||+|||+ +.. ......|...|+.||.++.+++..
T Consensus 273 ~G~i~vd~~~~~t~~~~vya~GD~~-~~~-------~~~~~~A~~~g~~aa~~i~~~l~~ 324 (333)
T 1vdc_A 273 DGYVVTKPGTTQTSVPGVFAAGDVQ-DKK-------YRQAITAAGTGCMAALDAEHYLQE 324 (333)
T ss_dssp TSCBCCCTTSCBCSSTTEEECGGGG-CSS-------CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEechhhcccCCCCEEEeeecc-CCC-------chhHHHHHHhHHHHHHHHHHHHHh
Confidence 477889987 689999999999997 221 123567888899999999988754
No 89
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.29 E-value=1.1e-10 Score=109.48 Aligned_cols=108 Identities=19% Similarity=0.176 Sum_probs=73.3
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHHHH
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
+||+|||||++|+.+|..|++.| +|+|+|+.+..-..+. .+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~----------------------------~~~--------- 44 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVS----------------------------RVP--------- 44 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCS----------------------------CCC---------
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCch----------------------------hhh---------
Confidence 79999999999999999999999 9999999762110000 000
Q ss_pred HhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006397 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
.+... +....+..+...+.+.+++. |++++.+ +|+++..++++
T Consensus 45 ---------------~~~~~--------------------~~~~~~~~~~~~l~~~~~~~-gv~v~~~-~v~~i~~~~~~ 87 (180)
T 2ywl_A 45 ---------------NYPGL--------------------LDEPSGEELLRRLEAHARRY-GAEVRPG-VVKGVRDMGGV 87 (180)
T ss_dssp ---------------CSTTC--------------------TTCCCHHHHHHHHHHHHHHT-TCEEEEC-CCCEEEECSSS
T ss_pred ---------------ccCCC--------------------cCCCCHHHHHHHHHHHHHHc-CCEEEeC-EEEEEEEcCCE
Confidence 00000 00112456777788888775 9999999 99999875332
Q ss_pred CCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 248 PDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
+.+ ...+| ++.+|.||+|+|..+
T Consensus 88 -------~~v-~~~~g---~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 88 -------FEV-ETEEG---VEKAERLLLCTHKDP 110 (180)
T ss_dssp -------EEE-ECSSC---EEEEEEEEECCTTCC
T ss_pred -------EEE-EECCC---EEEECEEEECCCCCC
Confidence 222 22445 589999999999543
No 90
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.29 E-value=7.5e-12 Score=134.14 Aligned_cols=52 Identities=21% Similarity=0.239 Sum_probs=39.2
Q ss_pred ceeEeCCCCcccccCcccccccccCCCC----CCCccCchhhHHHHHHHHHHHHHHHH
Q 006397 437 GGVRAGLQGETNVRGLYVAGEVACTGLH----GANRLASNSLLEALVFARRAVQPSID 490 (647)
Q Consensus 437 GGi~vD~~~~T~ipGLyAaGe~a~gG~~----Ga~rl~g~sl~~a~v~G~~Ag~~a~~ 490 (647)
+||.||++++|++|++||+|||+ ...+ | .++.-.....|...|+.||++++.
T Consensus 265 ~gi~vd~~~~t~~~~iyA~GD~a-~~~~~~~~g-~~~~~~~~~~A~~qg~~aa~~i~g 320 (415)
T 3lxd_A 265 NGVDVDEFCRTSLTDVYAIGDCA-AHANDFADG-AVIRLESVQNANDMATAAAKDICG 320 (415)
T ss_dssp SSEECCTTCBCSSTTEEECGGGE-EEECGGGTT-CEECCCSHHHHHHHHHHHHHHHTT
T ss_pred CCEEECCCCCcCCCCEEEEEeee-eecCcccCC-cceeechHHHHHHHHHHHHHHhcC
Confidence 56999999999999999999998 2322 2 222223457788889999988765
No 91
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.29 E-value=2.1e-11 Score=133.85 Aligned_cols=180 Identities=12% Similarity=0.042 Sum_probs=102.2
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCC--CCHHHHHHHH-------HHhcCCC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPS--DSVESHMQDT-------IVAGAYL 157 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~--d~~~~~~~~~-------~~~g~~~ 157 (647)
++||+|||||++|+++|+.|+++| +|+||||....+|.|..+.|-+....... ... .+..+. ......+
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~~gtS~~s~gli~~g~~~~~~~~~-~l~~~~~~~~~~l~~~~~~l 81 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEHYEF-RLVSEALAEREVLLKMAPHI 81 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSGGGSSCCEECCCGGGGGGTCH-HHHHHHHHHHHHHHHHCTTT
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCCCCccccccccccccchhhhhchH-HHHHHHHHHHHHHHHhCCcc
Confidence 589999999999999999999999 99999999877777766655443211100 111 111111 1111100
Q ss_pred C---------CHHHH-HHHHHhhHHHHHHHHHcCCccccCCCCccc-cc--------ccCCccccceeecCCCcHHHHHH
Q 006397 158 C---------DDETV-RVVCTEGPDRIRELIAIGASFDRGEDGNLH-LA--------REGGHSHHRIVHAADMTGREIER 218 (647)
Q Consensus 158 ~---------~~~~~-~~~~~~~~~~~~~l~~~G~~~~~~~~g~~~-~~--------~~gg~~~~r~~~~~~~~g~~~~~ 218 (647)
. +.... ..... .....+..++ .+......... .. ..++..+. .....+..+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~l~~~~~~~~~~~P~l~~~~~~~~~~~----~g~v~~~~l~~ 153 (501)
T 2qcu_A 82 AFPMRFRLPHRPHLRPAWMIR---IGLFMYDHLG-KRTSLPGSTGLRFGANSVLKPEIKRGFEYS----DCWVDDARLVL 153 (501)
T ss_dssp EEEEEEEEECCTTTSCHHHHH---HHHHHHHSSS-CCSSSCCCEEEECCTTSSBCTTCCEEEEEE----EEEECHHHHHH
T ss_pred ccccCeEeccCcccchHHHHH---HHHHHHHhcC-CcEEECHHHHHHhhcCCCcchhceEEEEee----CCEEcHHHHHH
Confidence 0 00000 00000 0011111111 11100000000 00 00111110 11123677889
Q ss_pred HHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 219 ALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 219 ~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
.|.+.+.+. |++++++++|++|..++ .+.+|.+.+..+|+...++|+.||+|+|+++.
T Consensus 154 ~l~~~a~~~-Gv~i~~~~~V~~l~~~~-----~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 154 ANAQMVVRK-GGEVLTRTRATSARREN-----GLWIVEAEDIDTGKKYSWQARGLVNATGPWVK 211 (501)
T ss_dssp HHHHHHHHT-TCEEECSEEEEEEEEET-----TEEEEEEEETTTCCEEEEEESCEEECCGGGHH
T ss_pred HHHHHHHHc-CCEEEcCcEEEEEEEeC-----CEEEEEEEECCCCCEEEEECCEEEECCChhHH
Confidence 999999885 99999999999998863 36688877655677667999999999999875
No 92
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.29 E-value=1e-12 Score=142.63 Aligned_cols=37 Identities=32% Similarity=0.554 Sum_probs=33.2
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g 124 (647)
+|||+|||||+||+++|+.|++.| +|+|+|+.+..+|
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG 38 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGG 38 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSH
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCC
Confidence 379999999999999999999999 9999999865443
No 93
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.28 E-value=1.6e-12 Score=143.41 Aligned_cols=51 Identities=22% Similarity=0.248 Sum_probs=41.7
Q ss_pred cceeEeCCCCcccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhhc
Q 006397 436 CGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 436 ~GGi~vD~~~~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
.|.|.||++++|++||+||+|||+ +..+ .....|+-.|+.||.++.+++..
T Consensus 467 ~G~I~Vd~~~~ts~p~VfA~GD~~-~~~~-------~~~~~A~~~g~~aa~~i~~~L~~ 517 (521)
T 1hyu_A 467 MGEIIIDAKCETSVKGVFAAGDCT-TVPY-------KQIIIATGEGAKASLSAFDYLIR 517 (521)
T ss_dssp TSCBCCCTTCBCSSTTEEECSTTB-CCSS-------CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEeCCCCCCCCCCEEEeeccc-CCCc-------ceeeehHHhHHHHHHHHHHHHHh
Confidence 478999999999999999999997 2221 24567888999999999988754
No 94
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.27 E-value=7.5e-13 Score=143.76 Aligned_cols=34 Identities=18% Similarity=0.333 Sum_probs=31.6
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
.++||+|||||+||++||+.|++.| +|+|+|+..
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 38 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQA 38 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccCC
Confidence 4689999999999999999999999 999999943
No 95
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.27 E-value=1.3e-12 Score=141.47 Aligned_cols=33 Identities=18% Similarity=0.186 Sum_probs=30.6
Q ss_pred ccEEEECCcHHHHHHHHHHHhc--C-CeEEEEecCC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKH--G-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~--G-~V~vlEk~~~ 121 (647)
+||+|||||+||++||..|++. | +|+|+|+.+.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~ 36 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDF 36 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCc
Confidence 3899999999999999999998 8 9999999875
No 96
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.26 E-value=3.2e-11 Score=127.49 Aligned_cols=51 Identities=25% Similarity=0.330 Sum_probs=43.3
Q ss_pred ccccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeee
Q 006397 85 SVKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSA 135 (647)
Q Consensus 85 ~~~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~ 135 (647)
.+.++||+|||||++|+++|+.|+++| +|+|||+....+|.|..+.|.+..
T Consensus 14 ~~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~~~g~s~~~~g~~~~ 65 (382)
T 1ryi_A 14 MKRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGRTTSAAAGMLGA 65 (382)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTTTHHHHCCCBCCG
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCcccchhcCceecc
Confidence 345799999999999999999999999 999999998877777666665543
No 97
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.26 E-value=6.3e-11 Score=129.68 Aligned_cols=116 Identities=20% Similarity=0.239 Sum_probs=75.9
Q ss_pred cccccEEEECCcHHHHHHHHHHHhcCCeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHH
Q 006397 86 VKYFDFSVIGSGVAGLCYALEVAKHGTVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 86 ~~~~DVvIIGgG~AGl~aA~~la~~G~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
...+||+|||||++|+++|+.|++.-+|+|+|+.+..+|........ .
T Consensus 106 ~~~~dVvIIGgG~aGl~aA~~L~~~~~V~vie~~~~~GG~~~~~~~~---~----------------------------- 153 (493)
T 1y56_A 106 RVVVDVAIIGGGPAGIGAALELQQYLTVALIEERGWLGGDMWLKGIK---Q----------------------------- 153 (493)
T ss_dssp EEEESCCEECCSHHHHHHHHHHTTTCCEEEECTTSSSSCSGGGTCSE---E-----------------------------
T ss_pred cccCCEEEECccHHHHHHHHHHHhcCCEEEEeCCCCCCCeeeccccc---c-----------------------------
Confidence 45689999999999999999998766899999988655432211000 0
Q ss_pred HHHhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecC
Q 006397 166 VCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTL 245 (647)
Q Consensus 166 ~~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~ 245 (647)
.|++ ..+..+...+.+.+ + .+++++.++.|+++..++
T Consensus 154 --------------~g~~---------------------------~~~~~~~~~l~~~l-~-~~v~~~~~~~v~~i~~~~ 190 (493)
T 1y56_A 154 --------------EGFN---------------------------KDSRKVVEELVGKL-N-ENTKIYLETSALGVFDKG 190 (493)
T ss_dssp --------------TTTT---------------------------EEHHHHHHHHHHTC-C-TTEEEETTEEECCCEECS
T ss_pred --------------CCCC---------------------------CCHHHHHHHHHHHH-h-cCCEEEcCCEEEEEEcCC
Confidence 0000 01223434444444 3 599999999999988753
Q ss_pred CCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccccc
Q 006397 246 DGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHI 283 (647)
Q Consensus 246 ~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~ 283 (647)
. .+. +....+++...+.+|.+|+|||+....
T Consensus 191 ~----~~~---~~~~~~~~~~~~~~d~lvlAtGa~~~~ 221 (493)
T 1y56_A 191 E----YFL---VPVVRGDKLIEILAKRVVLATGAIDST 221 (493)
T ss_dssp S----SEE---EEEEETTEEEEEEESCEEECCCEEECC
T ss_pred c----EEE---EEEecCCeEEEEECCEEEECCCCCccC
Confidence 2 222 111134665679999999999987754
No 98
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=99.25 E-value=4.4e-11 Score=132.45 Aligned_cols=61 Identities=23% Similarity=0.293 Sum_probs=46.2
Q ss_pred HHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcC-eEEECCCcccc
Q 006397 221 LEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISK-VTLLASGGAGH 282 (647)
Q Consensus 221 ~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~-~VVlAtGg~~~ 282 (647)
+..+.+++|++|++++.|++|+.++++...+++||.+.+ .+|+..+++|+ .||||+|+++.
T Consensus 233 L~p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~-~~G~~~~v~A~kEVILsAGa~~S 294 (583)
T 3qvp_A 233 LLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGT-HKGNTHNVYAKHEVLLAAGSAVS 294 (583)
T ss_dssp TTTTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEES-STTCEEEEEEEEEEEECSCTTTH
T ss_pred HHHhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEe-cCCcEEEEEECCEEEEeCCccCC
Confidence 333344579999999999999997421113899999874 35777889995 79999999863
No 99
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.25 E-value=1.2e-11 Score=131.08 Aligned_cols=33 Identities=30% Similarity=0.403 Sum_probs=30.1
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC---CeEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG---TVAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G---~V~vlEk~~ 120 (647)
.+||+|||||+||++||+.|++.| +|+|+|+..
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 489999999999999999999998 589999864
No 100
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.25 E-value=1.9e-10 Score=124.04 Aligned_cols=62 Identities=13% Similarity=0.160 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHcCCCcEEEcce---EEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccccC
Q 006397 213 GREIERALLEAVVSDPNISVFEHH---FAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIY 284 (647)
Q Consensus 213 g~~~~~~L~~~~~~~~gv~i~~~~---~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~ 284 (647)
...+...|.+.+++. |++|++++ +|++|..+ ++ ++.||.+ .+|+ +|.||.||+|+|+++..+
T Consensus 160 ~~~~~~~L~~~a~~~-Gv~i~~~t~~~~V~~i~~~-~~---~v~gV~t---~~G~--~i~Ad~VV~AtG~~s~~l 224 (438)
T 3dje_A 160 ARNALVAAAREAQRM-GVKFVTGTPQGRVVTLIFE-NN---DVKGAVT---ADGK--IWRAERTFLCAGASAGQF 224 (438)
T ss_dssp HHHHHHHHHHHHHHT-TCEEEESTTTTCEEEEEEE-TT---EEEEEEE---TTTE--EEECSEEEECCGGGGGGT
T ss_pred HHHHHHHHHHHHHhc-CCEEEeCCcCceEEEEEec-CC---eEEEEEE---CCCC--EEECCEEEECCCCChhhh
Confidence 567888999999875 99999999 99999986 45 7878765 4564 689999999999998644
No 101
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.25 E-value=1.2e-11 Score=127.28 Aligned_cols=51 Identities=14% Similarity=0.136 Sum_probs=40.6
Q ss_pred cceeEeCCCC-----cccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhhc
Q 006397 436 CGGVRAGLQG-----ETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 436 ~GGi~vD~~~-----~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
.|.|.||.++ +|++||+||+|||+ +... .....|...|+.||.++.+++..
T Consensus 260 ~G~i~vd~~~~~~~~~t~~~~vya~GD~~-~~~~-------~~~~~A~~~g~~aa~~i~~~l~~ 315 (320)
T 1trb_A 260 NGYIKVQSGIHGNATQTSIPGVFAAGDVM-DHIY-------RQAITSAGTGCMAALDAERYLDG 315 (320)
T ss_dssp TTEECCCCSSSSCTTBCSSTTEEECGGGG-CSSS-------CCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CceEEECCCcccccccCCCCCEEEccccc-CCcc-------hhhhhhhccHHHHHHHHHHHHHh
Confidence 5778899986 89999999999997 2211 23567888999999999998754
No 102
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.23 E-value=3.1e-11 Score=128.22 Aligned_cols=147 Identities=18% Similarity=0.218 Sum_probs=91.5
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHH
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
.++||+|||||++|+++|+.|+++| +|+|+|+....++.. ...+++.
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~-~~~~~~~------------------------------- 50 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPV-RCGEGLS------------------------------- 50 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSC-CSCCEEE-------------------------------
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCc-ccccccC-------------------------------
Confidence 4589999999999999999999999 999999988543322 2222221
Q ss_pred HHHhhHHHHHHHHHcCCccc-------------cCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEE
Q 006397 166 VCTEGPDRIRELIAIGASFD-------------RGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISV 232 (647)
Q Consensus 166 ~~~~~~~~~~~l~~~G~~~~-------------~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i 232 (647)
...++.+|+... ...++................+ ......+...|.+.+.+ .|+++
T Consensus 51 --------~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~~~~-~gv~i 119 (397)
T 3cgv_A 51 --------KGILNEADIKADRSFIANEVKGARIYGPSEKRPIILQSEKAGNEVGY--VLERDKFDKHLAALAAK-AGADV 119 (397)
T ss_dssp --------THHHHHTTCCCCTTTEEEEESEEEEECTTCSSCEEEC-----CCCEE--EECHHHHHHHHHHHHHH-HTCEE
T ss_pred --------HHHHHHcCCCCChHHhhhhcceEEEEcCCCCEEEEEeccccCCceeE--EEeHHHHHHHHHHHHHh-CCCEE
Confidence 011122222110 0011111000000000000000 11245677888888887 49999
Q ss_pred EcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 233 FEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 233 ~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
+.+++|+++..+ ++ ++.||.+.+. ++..++.|+.||.|+|.++.
T Consensus 120 ~~~~~v~~i~~~-~~---~v~gv~~~~~--~~~~~~~a~~vV~A~G~~s~ 163 (397)
T 3cgv_A 120 WVKSPALGVIKE-NG---KVAGAKIRHN--NEIVDVRAKMVIAADGFESE 163 (397)
T ss_dssp ESSCCEEEEEEE-TT---EEEEEEEEET--TEEEEEEEEEEEECCCTTCH
T ss_pred EECCEEEEEEEe-CC---EEEEEEEEEC--CeEEEEEcCEEEECCCcchH
Confidence 999999999887 55 7888887642 44458999999999998874
No 103
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.23 E-value=1.6e-11 Score=129.66 Aligned_cols=180 Identities=14% Similarity=0.123 Sum_probs=98.8
Q ss_pred ccccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC-CCCCccccccCCeeeecCCCCCHHHHHHHH---HHhc-CCC-
Q 006397 85 SVKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE-PHESNTNYAQGGVSAVLCPSDSVESHMQDT---IVAG-AYL- 157 (647)
Q Consensus 85 ~~~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~---~~~g-~~~- 157 (647)
.+.++||+|||||++|+++|++|+ +| +|+||||.. ..++.|..+.|.+...... +....+.... +..- ..+
T Consensus 6 ~~~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~g~~as~~~~g~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~ 83 (381)
T 3nyc_A 6 HPIEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQPGYHSTGRSAAHYTVAYGT-PQVRALTAASRAFFDNPPAGFC 83 (381)
T ss_dssp EEEECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSSTTSSGGGSCCCEECSSSSC-HHHHHHHHHHHHHHHSCCTTSC
T ss_pred CCCcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCccccccccccceeecccCC-HHHHHHHHHHHHHHHHhhhhhC
Confidence 345789999999999999999999 69 999999996 4445665555544433221 1111111111 1100 000
Q ss_pred -------------CCHHHHHHHHHhhHHHHHHHHHcCCccccCCCCccccc--ccCCccccc-eeecC--CCcHHHHHHH
Q 006397 158 -------------CDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLA--REGGHSHHR-IVHAA--DMTGREIERA 219 (647)
Q Consensus 158 -------------~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~g~~~~~--~~gg~~~~r-~~~~~--~~~g~~~~~~ 219 (647)
...+. ........+++...|+++.......+... ......... ...+. ......+...
T Consensus 84 ~~~~~~~~g~l~~~~~~~----~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (381)
T 3nyc_A 84 EHPLLSPRPEMVVDFSDD----PEELRRQYESGKALVPQMRLLDAEQACSIVPVLRRDKVFGATYDPTGADIDTDALHQG 159 (381)
T ss_dssp SSCSEEECCEEEECSSCC----HHHHHHHHHHHHHHCTTCEEECHHHHHHHSTTBCGGGCCCEEEETTCEEECHHHHHHH
T ss_pred CcccccccceEEEechHH----HHHHHHHHHHHHHcCCCcEEeCHHHHHHhCCCcccccceEEEEcCCCceECHHHHHHH
Confidence 00000 01112223444455554432110000000 000000000 11111 1135678899
Q ss_pred HHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 220 LLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 220 L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
|.+.+++. |++|+++++|++|..+ ++ . .+|. +.+| .+.|+.||+|+|+++.
T Consensus 160 l~~~a~~~-Gv~i~~~~~V~~i~~~-~~---~-~~V~---t~~g---~i~a~~VV~A~G~~s~ 210 (381)
T 3nyc_A 160 YLRGIRRN-QGQVLCNHEALEIRRV-DG---A-WEVR---CDAG---SYRAAVLVNAAGAWCD 210 (381)
T ss_dssp HHHHHHHT-TCEEESSCCCCEEEEE-TT---E-EEEE---CSSE---EEEESEEEECCGGGHH
T ss_pred HHHHHHHC-CCEEEcCCEEEEEEEe-CC---e-EEEE---eCCC---EEEcCEEEECCChhHH
Confidence 99999885 9999999999999986 34 3 2343 2344 6899999999999874
No 104
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=99.21 E-value=4.3e-11 Score=132.58 Aligned_cols=54 Identities=19% Similarity=0.389 Sum_probs=44.2
Q ss_pred HcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEc-CeEEECCCccc
Q 006397 225 VSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFIS-KVTLLASGGAG 281 (647)
Q Consensus 225 ~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A-~~VVlAtGg~~ 281 (647)
.+++|++|+.++.|++|+.++++ .+++||.+.+. +|+..+++| +.||||+|++.
T Consensus 216 ~~r~Nl~v~~~a~v~ri~~~~~~--~~a~GV~~~~~-~g~~~~v~A~keVILsaGa~~ 270 (577)
T 3q9t_A 216 KNKPNITIVPEVHSKRLIINEAD--RTCKGVTVVTA-AGNELNFFADREVILSQGVFE 270 (577)
T ss_dssp SSCTTEEEECSEEEEEEEEETTT--TEEEEEEEEET-TSCEEEEEEEEEEEECSHHHH
T ss_pred hcCCCeEEEcCcEEEEEEEeCCC--CEEEEEEEEeC-CCcEEEEEeeeEEEEcccccC
Confidence 34579999999999999997422 28999999763 477778999 78999999885
No 105
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.21 E-value=1.7e-10 Score=127.05 Aligned_cols=160 Identities=22% Similarity=0.252 Sum_probs=95.0
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHH
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
.++||+|||||++|+++|+.|+++| +|+||||...+..... .++ . +.....
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g---~~~--------~-----------------~~~~~~ 57 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIG---ESL--------L-----------------PATVHG 57 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSC---CBC--------C-----------------HHHHTT
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCC---ccc--------C-----------------cchHHH
Confidence 4689999999999999999999999 9999999875432110 000 0 000000
Q ss_pred HHHhhHHHHHHHHHcCCccccC------CCCc-c--cccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcce
Q 006397 166 VCTEGPDRIRELIAIGASFDRG------EDGN-L--HLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHH 236 (647)
Q Consensus 166 ~~~~~~~~~~~l~~~G~~~~~~------~~g~-~--~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~ 236 (647)
+... ....+.+...+...... .... + ............ ........+...|.+.+.+ .|++++.++
T Consensus 58 ~l~~-lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~r~~l~~~L~~~a~~-~Gv~i~~~~ 132 (512)
T 3e1t_A 58 ICAM-LGLTDEMKRAGFPIKRGGTFRWGKEPEPWTFGFTRHPDDPYGF---AYQVERARFDDMLLRNSER-KGVDVRERH 132 (512)
T ss_dssp HHHH-TTCHHHHHTTTCCEECEEEEECSSCSSCEEEESSSSSSSTTCC---EEBCCHHHHHHHHHHHHHH-TTCEEESSC
T ss_pred HHHH-hCcHHHHHHcCCccccCceEEecCCccccccccccCCCCCcce---eeEecHHHHHHHHHHHHHh-CCCEEEcCC
Confidence 0000 00012222333322110 0000 0 000000000000 0112245788888888887 599999999
Q ss_pred EEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccccC
Q 006397 237 FAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIY 284 (647)
Q Consensus 237 ~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~ 284 (647)
+|+++..+ ++ ++.||.+.+ .+|+..++.||.||.|+|..+.+-
T Consensus 133 ~V~~v~~~-~~---~v~gv~~~~-~dG~~~~i~ad~VI~AdG~~S~vr 175 (512)
T 3e1t_A 133 EVIDVLFE-GE---RAVGVRYRN-TEGVELMAHARFIVDASGNRTRVS 175 (512)
T ss_dssp EEEEEEEE-TT---EEEEEEEEC-SSSCEEEEEEEEEEECCCTTCSSG
T ss_pred EEEEEEEE-CC---EEEEEEEEe-CCCCEEEEEcCEEEECCCcchHHH
Confidence 99999986 45 788888765 457666899999999999988553
No 106
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.20 E-value=1.1e-11 Score=128.90 Aligned_cols=51 Identities=16% Similarity=0.078 Sum_probs=39.4
Q ss_pred cceeEeCCC-CcccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhhc
Q 006397 436 CGGVRAGLQ-GETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 436 ~GGi~vD~~-~~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
.|.|.||++ ++|++||+||+|||+ +... .....|...|+.||.++.+++..
T Consensus 266 ~G~i~vd~~~~~t~~~~iya~GD~~-~~~~-------~~~~~A~~~g~~aA~~i~~~l~~ 317 (335)
T 2a87_A 266 DGYVLVQGRTTSTSLPGVFAAGDLV-DRTY-------RQAVTAAGSGCAAAIDAERWLAE 317 (335)
T ss_dssp TSCBCCSTTSSBCSSTTEEECGGGT-CCSC-------CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccEEeCCCCCccCCCCEEEeeecC-CccH-------HHHHHHHHhHHHHHHHHHHHhhc
Confidence 477889986 689999999999997 2211 13456778899999999988754
No 107
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.20 E-value=1.7e-10 Score=122.23 Aligned_cols=175 Identities=13% Similarity=0.169 Sum_probs=96.4
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCC--CccccccCCeeeecCCCCCHHHH-------HHHHHHh-cCC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHE--SNTNYAQGGVSAVLCPSDSVESH-------MQDTIVA-GAY 156 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~--g~s~~a~Ggi~~~~~~~d~~~~~-------~~~~~~~-g~~ 156 (647)
++||+|||||++|+++|+.|+++| +|+|||+....+ |+|..+.+.+............+ +.+.... +..
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 82 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLALRSQELWYELEKETHHK 82 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSCSSSSSCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHHHCSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHhCCc
Confidence 589999999999999999999999 999999988765 55544333332222111111111 1111111 100
Q ss_pred CC------------CHHHHHHHHHhhHHHHHHHHHcCCccccCCCCcccccccCCcc---c-cceeecC--CCcHHHHHH
Q 006397 157 LC------------DDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHS---H-HRIVHAA--DMTGREIER 218 (647)
Q Consensus 157 ~~------------~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~---~-~r~~~~~--~~~g~~~~~ 218 (647)
.. +... ....++++..+|+++.......+. ....... . ....... ......+..
T Consensus 83 ~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~g~~~~~l~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (389)
T 2gf3_A 83 IFTKTGVLVFGPKGESAF-------VAETMEAAKEHSLTVDLLEGDEIN-KRWPGITVPENYNAIFEPNSGVLFSENCIR 154 (389)
T ss_dssp CEECCCEEEEEETTCCHH-------HHHHHHHHHHTTCCCEEEETHHHH-HHSTTCCCCTTEEEEEETTCEEEEHHHHHH
T ss_pred ceeecceEEEcCCCchHH-------HHHHHHHHHHcCCCcEEcCHHHHH-HhCCCcccCCCceEEEeCCCcEEeHHHHHH
Confidence 00 0000 112234445566554221110000 0000000 0 0011111 112467888
Q ss_pred HHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 219 ALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 219 ~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
.|.+.+++. |++++++++|++|..++++ + .|. . .+| .+.|+.||+|+|.++.
T Consensus 155 ~l~~~~~~~-Gv~i~~~~~v~~i~~~~~~----~-~v~--~-~~g---~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 155 AYRELAEAR-GAKVLTHTRVEDFDISPDS----V-KIE--T-ANG---SYTADKLIVSMGAWNS 206 (389)
T ss_dssp HHHHHHHHT-TCEEECSCCEEEEEECSSC----E-EEE--E-TTE---EEEEEEEEECCGGGHH
T ss_pred HHHHHHHHC-CCEEEcCcEEEEEEecCCe----E-EEE--e-CCC---EEEeCEEEEecCccHH
Confidence 999999885 9999999999999886332 2 232 2 334 5899999999998864
No 108
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.20 E-value=1.1e-10 Score=126.18 Aligned_cols=49 Identities=24% Similarity=0.445 Sum_probs=40.9
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC--CeEEEEe-cCCCCCccccccCCeee
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG--TVAVITK-AEPHESNTNYAQGGVSA 135 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk-~~~~~g~s~~a~Ggi~~ 135 (647)
.++||+|||||++|+++|+.|+++| +|+|||| .....+.|..+.|.+..
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~~~g~S~~~~g~i~~ 73 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAPGSGDSGRSMAAFRT 73 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSSTTCSGGGSSCCEEEC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCCCCCcccCCCcEecc
Confidence 4689999999999999999999998 8999999 76666666666554543
No 109
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.20 E-value=4e-11 Score=128.19 Aligned_cols=52 Identities=23% Similarity=0.303 Sum_probs=38.1
Q ss_pred ceeEeCCCCcccccCcccccccccCCCC--CCCccCchhhHHHHHHHHHHHHHHHH
Q 006397 437 GGVRAGLQGETNVRGLYVAGEVACTGLH--GANRLASNSLLEALVFARRAVQPSID 490 (647)
Q Consensus 437 GGi~vD~~~~T~ipGLyAaGe~a~gG~~--Ga~rl~g~sl~~a~v~G~~Ag~~a~~ 490 (647)
+||.||++++|++|++||+|||+ ...+ |. +..-.....|...|+.||.+++.
T Consensus 255 ~gi~vd~~~~t~~~~IyA~GD~a-~~~~~~g~-~~~~~~~~~A~~qg~~aa~~i~g 308 (410)
T 3ef6_A 255 RGVIVDHCGATLAKGVFAVGDVA-SWPLRAGG-RRSLETYMNAQRQAAAVAAAILG 308 (410)
T ss_dssp SSEECCTTSBCSSTTEEECGGGE-EEEBTTSS-EECCCCHHHHHHHHHHHHHHHTT
T ss_pred CeEEEccCeeECCCCEEEEEcce-eccCCCCC-eeeechHHHHHHHHHHHHHHHcC
Confidence 67999999999999999999998 2211 11 11112356788889999988875
No 110
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.19 E-value=3.5e-10 Score=120.29 Aligned_cols=58 Identities=12% Similarity=0.102 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 213 GREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 213 g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
...+...|.+.+++. |++|+++++|++|..+ ++ .+ .+.. .+| .|.|+.||+|+|+++.
T Consensus 152 ~~~~~~~l~~~a~~~-Gv~i~~~~~V~~i~~~-~~---~v---~v~t-~~g---~i~a~~VV~A~G~~s~ 209 (397)
T 2oln_A 152 VRGTLAALFTLAQAA-GATLRAGETVTELVPD-AD---GV---SVTT-DRG---TYRAGKVVLACGPYTN 209 (397)
T ss_dssp HHHHHHHHHHHHHHT-TCEEEESCCEEEEEEE-TT---EE---EEEE-SSC---EEEEEEEEECCGGGHH
T ss_pred HHHHHHHHHHHHHHc-CCEEECCCEEEEEEEc-CC---eE---EEEE-CCC---EEEcCEEEEcCCcChH
Confidence 456788888888875 9999999999999876 33 33 3322 334 5899999999999853
No 111
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.18 E-value=1.3e-11 Score=135.24 Aligned_cols=34 Identities=15% Similarity=0.210 Sum_probs=30.7
Q ss_pred cccEEEECCcHHHHHHHHHHHhc---C-CeEEEEecCC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKH---G-TVAVITKAEP 121 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~---G-~V~vlEk~~~ 121 (647)
++||+|||||+||+++|..|++. + +|+|+|+...
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~ 72 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSN 72 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCC
Confidence 58999999999999999999986 3 8999999764
No 112
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.18 E-value=1.2e-10 Score=130.05 Aligned_cols=159 Identities=22% Similarity=0.286 Sum_probs=94.5
Q ss_pred cccccEEEECCcHHHHHHHHHHHhc------C-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCC
Q 006397 86 VKYFDFSVIGSGVAGLCYALEVAKH------G-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLC 158 (647)
Q Consensus 86 ~~~~DVvIIGgG~AGl~aA~~la~~------G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~ 158 (647)
..++||||||||+||+++|+.|++. | +|+||||....++.. .+ |+. +.+ ...+
T Consensus 33 ~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~-~~-g~~---l~~-~~l~-------------- 92 (584)
T 2gmh_A 33 AEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHT-LS-GAC---LDP-RAFE-------------- 92 (584)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTC-CC-CCE---ECT-HHHH--------------
T ss_pred ccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCcc-cc-ccc---cCH-HHHH--------------
Confidence 4569999999999999999999999 9 999999987654432 11 221 111 0011
Q ss_pred CHHHHHHHHHhhHHHHHHHHHcCCcccc----------CCCCcccccccCC-ccccceeecCCCcHHHHHHHHHHHHHcC
Q 006397 159 DDETVRVVCTEGPDRIRELIAIGASFDR----------GEDGNLHLAREGG-HSHHRIVHAADMTGREIERALLEAVVSD 227 (647)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~l~~~G~~~~~----------~~~g~~~~~~~gg-~~~~r~~~~~~~~g~~~~~~L~~~~~~~ 227 (647)
.+ +..+...|.++.. ...+.+.+..... .......+ ......+...|.+.+++.
T Consensus 93 ------~l-------l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~r~~l~~~L~~~a~~~ 157 (584)
T 2gmh_A 93 ------EL-------FPDWKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNY--VVRLGHLVSWMGEQAEAL 157 (584)
T ss_dssp ------HH-------CTTHHHHTCCCCEECCEEEEEEECSSCEEECCCCTTSTTCCTTCE--ECCHHHHHHHHHHHHHHT
T ss_pred ------HH-------HHHHHhcCCceeeeechhheeeeccCCCccccccCccccccCCCE--EEeHHHHHHHHHHHHHHc
Confidence 11 0011112222211 0001000000000 00000000 112457888999999885
Q ss_pred CCcEEEcceEEEEEEecCCCCCceEEEEEEEec---CCCeE-------EEEEcCeEEECCCccccc
Q 006397 228 PNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNV---ETQEV-------VRFISKVTLLASGGAGHI 283 (647)
Q Consensus 228 ~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~---~~G~~-------~~i~A~~VVlAtGg~~~~ 283 (647)
||+|++++.|++|..++++ +|.||.+.+. .+|+. .+++||.||+|+|+++.+
T Consensus 158 -Gv~i~~g~~v~~l~~~~~g---~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~v 219 (584)
T 2gmh_A 158 -GVEVYPGYAAAEILFHEDG---SVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHL 219 (584)
T ss_dssp -TCEEETTCCEEEEEECTTS---SEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHH
T ss_pred -CCEEEcCCEEEEEEEcCCC---CEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchH
Confidence 9999999999999987556 7888876431 23432 379999999999999853
No 113
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.17 E-value=1.6e-10 Score=123.78 Aligned_cols=159 Identities=16% Similarity=0.114 Sum_probs=89.4
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHH
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
.++||+|||||++|+++|+.|+++| +|+|+||...+.... |.. .. .... ..+. .
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~-----g~~--~~-~~~~-~~l~----~------------ 58 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVI-----GES--LL-PRCM-EHLD----E------------ 58 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCS-----CCB--CC-GGGH-HHHH----H------------
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc-----cCc--cc-HhHH-HHHH----H------------
Confidence 3589999999999999999999999 999999987543111 110 00 0000 0000 0
Q ss_pred HHHhhHHHHHHHHHcCCccccC----CCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEE
Q 006397 166 VCTEGPDRIRELIAIGASFDRG----EDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDL 241 (647)
Q Consensus 166 ~~~~~~~~~~~l~~~G~~~~~~----~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l 241 (647)
+ ...+.+...+...... ............................+...|.+.+.+. |+++++++.|+++
T Consensus 59 ~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~-gv~i~~~~~v~~i 132 (421)
T 3nix_A 59 A-----GFLDAVKAQGFQQKFGAKFVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQ-GVDVEYEVGVTDI 132 (421)
T ss_dssp T-----TCHHHHHHTTCEEECEEEEEETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHH-TCEEECSEEEEEE
T ss_pred c-----CChHHHHHcCCcccCCcEEEeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhC-CCEEEcCCEEEEE
Confidence 0 0012222333222100 0000000000000000000001123457888888888875 9999999999999
Q ss_pred EecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 242 LTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 242 ~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
..++++ .+ +.+.. .+|+..++.|+.||+|+|..+.
T Consensus 133 ~~~~~~---~~--v~v~~-~~g~~~~~~a~~vV~A~G~~s~ 167 (421)
T 3nix_A 133 KFFGTD---SV--TTIED-INGNKREIEARFIIDASGYGRV 167 (421)
T ss_dssp EEETTE---EE--EEEEE-TTSCEEEEEEEEEEECCGGGCH
T ss_pred EEeCCE---EE--EEEEc-CCCCEEEEEcCEEEECCCCchh
Confidence 887443 22 33333 5677678999999999998874
No 114
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.17 E-value=6.2e-11 Score=126.47 Aligned_cols=53 Identities=17% Similarity=0.007 Sum_probs=38.7
Q ss_pred ceeEeCCCCcccccCcccccccccCCCC--CCCccCchhhHHHHHHHHHHHHHHHH
Q 006397 437 GGVRAGLQGETNVRGLYVAGEVACTGLH--GANRLASNSLLEALVFARRAVQPSID 490 (647)
Q Consensus 437 GGi~vD~~~~T~ipGLyAaGe~a~gG~~--Ga~rl~g~sl~~a~v~G~~Ag~~a~~ 490 (647)
+||.||++++|++|++||+|||+. ..+ ...++.-.+...|...|+.||.++..
T Consensus 255 ~Gi~vd~~~~t~~~~iya~GD~a~-~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 309 (404)
T 3fg2_P 255 AGIIVDQQLLTSDPHISAIGDCAL-FESVRFGETMRVESVQNATDQARCVAARLTG 309 (404)
T ss_dssp SSEEECTTSBCSSTTEEECGGGEE-EEETTTTEEECCCSHHHHHHHHHHHHHHTTT
T ss_pred CCEEECCCcccCCCCEEEeeccee-ecCccCCceeeehHHHHHHHHHHHHHHHhCC
Confidence 569999999999999999999982 221 11222223467788889999888764
No 115
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.15 E-value=2.2e-10 Score=122.40 Aligned_cols=35 Identities=20% Similarity=0.421 Sum_probs=31.5
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-C--eEEEEecCC
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-T--VAVITKAEP 121 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~--V~vlEk~~~ 121 (647)
..+||+|||||+||+++|..|++.| + |+|+|+.+.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~ 43 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAE 43 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCS
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCC
Confidence 3589999999999999999999998 4 999999764
No 116
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.15 E-value=6.4e-11 Score=127.43 Aligned_cols=34 Identities=21% Similarity=0.427 Sum_probs=30.8
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC---CeEEEEecCC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG---TVAVITKAEP 121 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G---~V~vlEk~~~ 121 (647)
.+||+|||||+||+++|..|++.| +|+|+|+.+.
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCS
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCC
Confidence 479999999999999999999998 4999998753
No 117
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.14 E-value=4.4e-10 Score=118.27 Aligned_cols=177 Identities=8% Similarity=0.061 Sum_probs=94.0
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCcccc-ccCCeee-ecCCCCCHHH-------HHHHHHHhcC--
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNY-AQGGVSA-VLCPSDSVES-------HMQDTIVAGA-- 155 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~-a~Ggi~~-~~~~~d~~~~-------~~~~~~~~g~-- 155 (647)
++||+|||||++|+++|+.|+++| +|+|||+.....+.+.. ..+++.. .......... .+.+....+.
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 81 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVPLVLRAQMLWDELSRHNEDD 81 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSSSSCCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHTTCSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCccceeeeccCCCchHHHHHHHHHHHHHHHHHhCCCc
Confidence 489999999999999999999999 99999998876443221 1111211 1111111111 1111110000
Q ss_pred CC-----------CCHHHHHHHHHhhHHHHHHHHHcCCccccCCCCcccccccCCc----cccceeecC--CCcHHHHHH
Q 006397 156 YL-----------CDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGH----SHHRIVHAA--DMTGREIER 218 (647)
Q Consensus 156 ~~-----------~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~----~~~r~~~~~--~~~g~~~~~ 218 (647)
.. .+.+. .....+.+..+|+++.......+. ....+. .......+. ......+..
T Consensus 82 ~~~~~~g~l~~~~~~~~~-------~~~~~~~~~~~g~~~~~l~~~~~~-~~~p~~~~~~~~~~~~~~~~g~~~~~~l~~ 153 (372)
T 2uzz_A 82 PIFVRSGVINLGPADSTF-------LANVAHSAEQWQLNVEKLDAQGIM-ARWPEIRVPDNYIGLFETDSGFLRSELAIK 153 (372)
T ss_dssp CSEECCCEEEEEETTCHH-------HHHHHHHHHHTTCCEEEEEHHHHH-HHCTTCCCCTTEEEEEESSCEEEEHHHHHH
T ss_pred cceeeeceEEEeCCCcHH-------HHHHHHHHHHcCCCcEecCHHHHH-hhCCCccCCCCceEEEeCCCcEEcHHHHHH
Confidence 00 00001 011233444555544221100000 000000 000011111 112567888
Q ss_pred HHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccccC
Q 006397 219 ALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIY 284 (647)
Q Consensus 219 ~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~ 284 (647)
.|.+.+++. |++++++++|++|..+++ .+ .|. +.+| .+.|+.||+|+|+++..+
T Consensus 154 ~l~~~~~~~-G~~i~~~~~V~~i~~~~~----~~-~v~---~~~g---~~~a~~vV~a~G~~s~~l 207 (372)
T 2uzz_A 154 TWIQLAKEA-GCAQLFNCPVTAIRHDDD----GV-TIE---TADG---EYQAKKAIVCAGTWVKDL 207 (372)
T ss_dssp HHHHHHHHT-TCEEECSCCEEEEEECSS----SE-EEE---ESSC---EEEEEEEEECCGGGGGGT
T ss_pred HHHHHHHHC-CCEEEcCCEEEEEEEcCC----EE-EEE---ECCC---eEEcCEEEEcCCccHHhh
Confidence 999988875 999999999999987633 22 232 2445 389999999999988543
No 118
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.14 E-value=4.4e-10 Score=124.50 Aligned_cols=159 Identities=15% Similarity=0.137 Sum_probs=91.1
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHH
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
.++||+|||||++||++|+.|+++| +|+||||.......+ .. .++ .+...+.
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~-~~-~~l-------------------------~~~~~~~ 56 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYP-RA-AGQ-------------------------NPRTMEL 56 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCC-CS-CCB-------------------------CHHHHHH
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCC-cc-ceE-------------------------CHHHHHH
Confidence 4689999999999999999999999 999999987543211 10 011 1111111
Q ss_pred HHHhhHHHHHHHHHcCCccccC----------CCCcccc----ccc----C-CccccceeecCCCcHHHHHHHHHHHHHc
Q 006397 166 VCTEGPDRIRELIAIGASFDRG----------EDGNLHL----ARE----G-GHSHHRIVHAADMTGREIERALLEAVVS 226 (647)
Q Consensus 166 ~~~~~~~~~~~l~~~G~~~~~~----------~~g~~~~----~~~----g-g~~~~r~~~~~~~~g~~~~~~L~~~~~~ 226 (647)
+... ...+.+...+.++... ..|.... ... . ....+. .........+...|.+.+.+
T Consensus 57 l~~l--Gl~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~l~~~L~~~a~~ 132 (535)
T 3ihg_A 57 LRIG--GVADEVVRADDIRGTQGDFVIRLAESVRGEILRTVSESFDDMVAATEPCTPA--GWAMLSQDKLEPILLAQARK 132 (535)
T ss_dssp HHHT--TCHHHHHHSCCSSCTTSCCEEEEESSSSSCEEEEEESCHHHHHHTTGGGCSC--CCBCCCHHHHHHHHHHHHHH
T ss_pred HHHc--CCHHHHHhhCCCcccccceeeeEEeccCCceeeeccccccccccccccCCCC--cccccCHHHHHHHHHHHHHh
Confidence 1100 0122333334332211 1111000 000 0 000000 01122356788889999988
Q ss_pred CCCcEEEcceEEEEEEecCCCCCceEEE--EEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 227 DPNISVFEHHFAIDLLTTLDGPDAVCHG--VDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 227 ~~gv~i~~~~~v~~l~~~~~g~~~~v~G--v~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
. |++|+++++|+++..++++ ++.+ +.+.+. ++ ..+++|+.||.|+|+++.
T Consensus 133 ~-gv~i~~~~~v~~i~~~~~~---~~~~v~v~~~~~-~~-~~~i~a~~vV~AdG~~S~ 184 (535)
T 3ihg_A 133 H-GGAIRFGTRLLSFRQHDDD---AGAGVTARLAGP-DG-EYDLRAGYLVGADGNRSL 184 (535)
T ss_dssp T-TCEEESSCEEEEEEEECGG---GCSEEEEEEEET-TE-EEEEEEEEEEECCCTTCH
T ss_pred C-CCEEEeCCEEEEEEECCCC---ccccEEEEEEcC-CC-eEEEEeCEEEECCCCcch
Confidence 5 9999999999999987542 2223 333332 22 457999999999999874
No 119
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=99.13 E-value=6.5e-11 Score=130.84 Aligned_cols=59 Identities=22% Similarity=0.281 Sum_probs=46.1
Q ss_pred HHHHHHHcCCCcEEEcceEEEEEEec---CC-CCCceEEEEEEEecCCC-eEEEEEc-CeEEECCCccc
Q 006397 219 ALLEAVVSDPNISVFEHHFAIDLLTT---LD-GPDAVCHGVDTLNVETQ-EVVRFIS-KVTLLASGGAG 281 (647)
Q Consensus 219 ~L~~~~~~~~gv~i~~~~~v~~l~~~---~~-g~~~~v~Gv~~~~~~~G-~~~~i~A-~~VVlAtGg~~ 281 (647)
+++..+.+++|++|+.++.|++|+.+ ++ + +++||.+.+. +| +..+++| +.||||+|++.
T Consensus 212 ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~---rA~GVe~~~~-~g~~~~~v~A~kEVILsAGai~ 276 (566)
T 3fim_B 212 AYLRPAQSRPNLSVLINAQVTKLVNSGTTNGLP---AFRCVEYAEQ-EGAPTTTVCAKKEVVLSAGSVG 276 (566)
T ss_dssp HTHHHHTTCTTEEEESSCEEEEEECCEEETTEE---ECCEEEEESS-TTSCCEEEEEEEEEEECCHHHH
T ss_pred HHhhhhccCCCeEEECCCEEEEEEeecCCCCCC---EEEEEEEEEC-CCceEEEEEeeeEEEEecCCcC
Confidence 44444545679999999999999987 22 4 8999998753 34 6678899 89999999875
No 120
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.13 E-value=3.6e-10 Score=125.87 Aligned_cols=156 Identities=18% Similarity=0.171 Sum_probs=91.1
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHH
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
.++||+|||||++|+++|+.|+++| +|+|||+...+..... .++ .+.....
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G---~~l-------------------------~p~~~~~ 73 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVG---ESL-------------------------LPGTMSI 73 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCC---CBC-------------------------CHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCcee---eeE-------------------------CHHHHHH
Confidence 4689999999999999999999999 9999999875443211 000 0111000
Q ss_pred HHHhhHHHHHHHHHcCCccc------cCCCCcc-cccccCCc----cccceeecCCCcHHHHHHHHHHHHHcCCCcEEEc
Q 006397 166 VCTEGPDRIRELIAIGASFD------RGEDGNL-HLAREGGH----SHHRIVHAADMTGREIERALLEAVVSDPNISVFE 234 (647)
Q Consensus 166 ~~~~~~~~~~~l~~~G~~~~------~~~~g~~-~~~~~gg~----~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~ 234 (647)
+... ...+.+...+.... ....... ........ ..+.. .......+...|.+.+.+ .|+++++
T Consensus 74 l~~l--Gl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~r~~l~~~L~~~a~~-~Gv~i~~ 147 (591)
T 3i3l_A 74 LNRL--GLQEKIDAQNYVKKPSATFLWGQDQAPWTFSFAAPKVAPWVFDHA---VQVKREEFDKLLLDEARS-RGITVHE 147 (591)
T ss_dssp HHHT--TCHHHHHHHCCEEECEEEEECSSSCCCEEEECCCC--CTTCCSCE---EECCHHHHHHHHHHHHHH-TTCEEET
T ss_pred HHHc--CCcHHHHhcCCcccCCcEEEecCCCccceeecccccccccccCee---EEEcHHHHHHHHHHHHHh-CCCEEEe
Confidence 0000 00112222222211 1101000 00000000 00000 112245788888888887 5999999
Q ss_pred ceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 235 HHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 235 ~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
++.|+++..+ ++ .+.+|.+.+ +|+..++.|+.||.|+|..+.
T Consensus 148 g~~V~~v~~~-~g---~~~~V~~~~--~G~~~~i~AdlVV~AdG~~S~ 189 (591)
T 3i3l_A 148 ETPVTDVDLS-DP---DRVVLTVRR--GGESVTVESDFVIDAGGSGGP 189 (591)
T ss_dssp TCCEEEEECC-ST---TCEEEEEEE--TTEEEEEEESEEEECCGGGCH
T ss_pred CCEEEEEEEc-CC---CEEEEEEec--CCceEEEEcCEEEECCCCcch
Confidence 9999999876 33 456776653 576668999999999998774
No 121
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.08 E-value=1.4e-10 Score=123.74 Aligned_cols=45 Identities=20% Similarity=0.338 Sum_probs=39.2
Q ss_pred ccccEEEECCcHHHHHHHHHHHhc--C-CeEEEEecCCCCCccccccC
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKH--G-TVAVITKAEPHESNTNYAQG 131 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~--G-~V~vlEk~~~~~g~s~~a~G 131 (647)
.++||+|||||++|+++|+.|+++ | +|+|||+.....+.+..+.|
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g 82 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILA 82 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCC
Confidence 458999999999999999999999 9 99999998877666655555
No 122
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.08 E-value=1.1e-09 Score=127.61 Aligned_cols=179 Identities=15% Similarity=0.141 Sum_probs=99.9
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC--CeEEEEecCCC--CCccccccCCeeeecCCCCCHHHHHHH---HHHhcC-----
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPH--ESNTNYAQGGVSAVLCPSDSVESHMQD---TIVAGA----- 155 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~~~--~g~s~~a~Ggi~~~~~~~d~~~~~~~~---~~~~g~----- 155 (647)
++||+|||||++|+++|+.|+++| +|+||||.... +|++..+.|.+.. .........+... .+..-.
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~~~~~gss~~~~G~~~~-~~~~~~~~~l~~~s~~~~~~l~~~~~~ 82 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLNMPGGSTSHAPGLVFQ-TNPSKTMASFAKYTVEKLLSLTEDGVS 82 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCTTCCCSGGGTCCCEECC-CCSCHHHHHHHHHHHHHHHHCEETTEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCCCCCcccceeCCceeec-CCCCHHHHHHHHHHHHHHHHHHhhCCC
Confidence 589999999999999999999999 69999998864 4455544443321 1111111111111 111100
Q ss_pred -----C----CCCHHHHHHHHHhhHHHHHHHHHcCCccccCCCCccc--ccccCCccccc-eeecC--CCcHHHHHHHHH
Q 006397 156 -----Y----LCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLH--LAREGGHSHHR-IVHAA--DMTGREIERALL 221 (647)
Q Consensus 156 -----~----~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~g~~~--~~~~gg~~~~r-~~~~~--~~~g~~~~~~L~ 221 (647)
+ ..+++... ......+++..+|+++.......+. ........... ...+. ......+...|.
T Consensus 83 ~~~~~G~l~~~~~~~~~~----~l~~~~~~~~~~G~~~~~l~~~e~~~~~p~l~~~~~~gg~~~~~~g~v~p~~l~~~L~ 158 (830)
T 1pj5_A 83 CFNQVGGLEVATTETRLA----DLKRKLGYAAAWGIEGRLLSPAECQELYPLLDGENILGGLHVPSDGLASAARAVQLLI 158 (830)
T ss_dssp SEECCCEEEEESSHHHHH----HHHHHHHHHHHHTCCCEEECHHHHHHHCTTSCGGGCCEEEEETTCEEECHHHHHHHHH
T ss_pred CeeecCcEEEEeCHHHHH----HHHHHHHHHHHcCCCeEEECHHHHHHhCccCCccceEEEEEECCCceEcHHHHHHHHH
Confidence 0 01122111 1122234455566654321100000 00000000000 11111 113567889999
Q ss_pred HHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 222 EAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 222 ~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
+.+++. |++|+++++|++|..+ ++ ++.+|.+ .+| +|.|+.||+|+|+++.
T Consensus 159 ~~a~~~-Gv~i~~~t~V~~i~~~-~~---~v~~V~t---~~G---~i~Ad~VV~AaG~~s~ 208 (830)
T 1pj5_A 159 KRTESA-GVTYRGSTTVTGIEQS-GG---RVTGVQT---ADG---VIPADIVVSCAGFWGA 208 (830)
T ss_dssp HHHHHT-TCEEECSCCEEEEEEE-TT---EEEEEEE---TTE---EEECSEEEECCGGGHH
T ss_pred HHHHHc-CCEEECCceEEEEEEe-CC---EEEEEEE---CCc---EEECCEEEECCccchH
Confidence 999885 9999999999999886 44 5666654 345 5999999999999874
No 123
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.08 E-value=9.2e-11 Score=126.72 Aligned_cols=49 Identities=22% Similarity=0.306 Sum_probs=41.7
Q ss_pred ceeEeCCC-CcccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhhc
Q 006397 437 GGVRAGLQ-GETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 437 GGi~vD~~-~~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
|.|.||++ ++|++||+||+|||+ +|. .....|+..|+.||.++..|+..
T Consensus 396 G~i~vd~~~~~Ts~~~VfA~GD~~-~g~--------~~v~~A~~~G~~aA~~i~~~L~~ 445 (456)
T 2vdc_G 396 GTLLVDHRTKMTNMDGVFAAGDIV-RGA--------SLVVWAIRDGRDAAEGIHAYAKA 445 (456)
T ss_dssp SSBCCCTTTCBCSSTTEEECGGGG-SSC--------CSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEECCCCCcCCCCCEEEecccc-CCc--------hHHHHHHHHHHHHHHHHHHHhhc
Confidence 78999998 999999999999997 332 24678899999999999998854
No 124
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.03 E-value=3.1e-09 Score=116.37 Aligned_cols=150 Identities=15% Similarity=0.120 Sum_probs=88.7
Q ss_pred CccccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHH
Q 006397 84 GSVKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDET 162 (647)
Q Consensus 84 ~~~~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~ 162 (647)
..+.++||+|||||++||++|+.|+++| +|+||||.+...... . ++. + .+.
T Consensus 7 ~~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~-r---~~~--l---------------------~~~- 58 (500)
T 2qa1_A 7 HHRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGES-R---GLG--F---------------------TAR- 58 (500)
T ss_dssp -CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCC-C---SEE--E---------------------CHH-
T ss_pred CccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCC-C---cce--E---------------------CHH-
Confidence 3456799999999999999999999999 999999986543211 0 111 0 011
Q ss_pred HHHHHHhhHHHHHHHHHcCCccccCC----C-C---ccccccc-CCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEE
Q 006397 163 VRVVCTEGPDRIRELIAIGASFDRGE----D-G---NLHLARE-GGHSHHRIVHAADMTGREIERALLEAVVSDPNISVF 233 (647)
Q Consensus 163 ~~~~~~~~~~~~~~l~~~G~~~~~~~----~-g---~~~~~~~-gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~ 233 (647)
.++.++.+|+.-.... . + ...+... ....++... ......+...|.+.+.+. |++|+
T Consensus 59 ----------~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~l~~~L~~~~~~~-gv~v~ 124 (500)
T 2qa1_A 59 ----------TMEVFDQRGILPRFGEVETSTQGHFGGLPIDFGVLEGAWQAAK---TVPQSVTETHLEQWATGL-GADIR 124 (500)
T ss_dssp ----------HHHHHHTTTCGGGGCSCCBCCEEEETTEEEEGGGSTTGGGCEE---EEEHHHHHHHHHHHHHHT-TCEEE
T ss_pred ----------HHHHHHHCCCHHHHHhccccccccccceecccccCCCCCCcee---ecCHHHHHHHHHHHHHHC-CCEEE
Confidence 1222233333110000 0 0 0000000 000000000 112356788888888875 99999
Q ss_pred cceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 234 EHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 234 ~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
.+++|+++..+++ .|. |.+.+ .+| ..+++|+.||.|+|+.+.
T Consensus 125 ~~~~v~~i~~~~~----~v~-v~~~~-~~g-~~~~~a~~vVgADG~~S~ 166 (500)
T 2qa1_A 125 RGHEVLSLTDDGA----GVT-VEVRG-PEG-KHTLRAAYLVGCDGGRSS 166 (500)
T ss_dssp ETCEEEEEEEETT----EEE-EEEEE-TTE-EEEEEESEEEECCCTTCH
T ss_pred CCcEEEEEEEcCC----eEE-EEEEc-CCC-CEEEEeCEEEECCCcchH
Confidence 9999999988743 343 54444 234 457999999999999885
No 125
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.01 E-value=2.4e-09 Score=114.30 Aligned_cols=157 Identities=17% Similarity=0.150 Sum_probs=88.0
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-C-eEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHH
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-T-VAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~-V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
.+||+|||||++|+++|+.|++.| + |+|+||.+..+.. ..|+... +...+.
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~----g~g~~l~-----------------------~~~~~~ 56 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPL----GVGINIQ-----------------------PAAVEA 56 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCC----SCEEEEC-----------------------HHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccc----eeEEEEC-----------------------hHHHHH
Confidence 589999999999999999999999 9 9999998754321 1122110 111111
Q ss_pred HHHhhHHHHHHHHHcCCccc----cCCCCcccccccC----CccccceeecCCCcHHHHHHHHHHHHHcCCC-cEEEcce
Q 006397 166 VCTEGPDRIRELIAIGASFD----RGEDGNLHLAREG----GHSHHRIVHAADMTGREIERALLEAVVSDPN-ISVFEHH 236 (647)
Q Consensus 166 ~~~~~~~~~~~l~~~G~~~~----~~~~g~~~~~~~g----g~~~~r~~~~~~~~g~~~~~~L~~~~~~~~g-v~i~~~~ 236 (647)
+.... ..+.+...+.+.. ...+|........ +...+. .......+...|.+.+.+..| ++++.++
T Consensus 57 l~~lg--~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----~~i~r~~l~~~L~~~~~~~~g~~~v~~~~ 130 (410)
T 3c96_A 57 LAELG--LGPALAATAIPTHELRYIDQSGATVWSEPRGVEAGNAYPQ----YSIHRGELQMILLAAVRERLGQQAVRTGL 130 (410)
T ss_dssp HHHTT--CHHHHHHHSEEECEEEEECTTSCEEEEEECGGGGTCSSCE----EEEEHHHHHHHHHHHHHHHHCTTSEEESE
T ss_pred HHHCC--ChHHHHhhCCCcceEEEEcCCCCEEeeccCCccccCCCCe----eeeeHHHHHHHHHHHHHhhCCCcEEEECC
Confidence 10000 0122222222221 0112221111000 000000 011245677888888865224 6899999
Q ss_pred EEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccccc
Q 006397 237 FAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHI 283 (647)
Q Consensus 237 ~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~ 283 (647)
+|+++.. +++ +. +.+.+..+|+..++.||.||.|+|..+.+
T Consensus 131 ~v~~i~~-~~~----v~-v~~~~~~~g~~~~~~ad~vV~AdG~~S~v 171 (410)
T 3c96_A 131 GVERIEE-RDG----RV-LIGARDGHGKPQALGADVLVGADGIHSAV 171 (410)
T ss_dssp EEEEEEE-ETT----EE-EEEEEETTSCEEEEEESEEEECCCTTCHH
T ss_pred EEEEEec-CCc----cE-EEEecCCCCCceEEecCEEEECCCccchh
Confidence 9999987 443 32 44443234655579999999999998853
No 126
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.00 E-value=2.4e-09 Score=118.99 Aligned_cols=155 Identities=16% Similarity=0.122 Sum_probs=86.0
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHH
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
.++||+|||||++|+++|+.|+++| +|+||||.+.....+ . ..++. +...+.
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~-r-~~~l~-------------------------~~s~~~ 100 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHD-R-AGALH-------------------------IRTVET 100 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSS-S-CCCBC-------------------------HHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCc-e-EEEEC-------------------------HHHHHH
Confidence 4689999999999999999999999 999999987543211 0 01111 111111
Q ss_pred HHHhhHHHHHHHHHcCCccccC-CCCc----ccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEE
Q 006397 166 VCTEGPDRIRELIAIGASFDRG-EDGN----LHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAID 240 (647)
Q Consensus 166 ~~~~~~~~~~~l~~~G~~~~~~-~~g~----~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~ 240 (647)
+... ...+.+...+...... ..+. +...... ...+ .........+...|.+.+.+. |++|+++++|++
T Consensus 101 l~~l--Gl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~i~~~~l~~~L~~~a~~~-gv~i~~~~~v~~ 173 (570)
T 3fmw_A 101 LDLR--GLLDRFLEGTQVAKGLPFAGIFTQGLDFGLVD-TRHP---YTGLVPQSRTEALLAEHAREA-GAEIPRGHEVTR 173 (570)
T ss_dssp HHTT--TCHHHHTTSCCBCSBCCBTTBCTTCCBGGGSC-CSCC---SBBCCCHHHHHHHHHHHHHHH-TEECCBSCEEEE
T ss_pred HHHc--CChHHHHhcCcccCCceeCCcccccccccccC-CCCC---eeEEeCHHHHHHHHHHHHHhC-CCEEEeCCEEEE
Confidence 1000 0011222222221100 0000 0000000 0000 011123456788888888874 999999999999
Q ss_pred EEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 241 LLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 241 l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
+..++++ +. |.+.+ .+|+ .+++|+.||.|+|+.+.
T Consensus 174 l~~~~~~----v~-v~~~~-~~G~-~~~~a~~vV~ADG~~S~ 208 (570)
T 3fmw_A 174 LRQDAEA----VE-VTVAG-PSGP-YPVRARYGVGCDGGRST 208 (570)
T ss_dssp CCBCSSC----EE-EEEEE-TTEE-EEEEESEEEECSCSSCH
T ss_pred EEEcCCe----EE-EEEEe-CCCc-EEEEeCEEEEcCCCCch
Confidence 9887443 32 43332 3453 47999999999999874
No 127
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.00 E-value=9.3e-10 Score=120.44 Aligned_cols=140 Identities=19% Similarity=0.167 Sum_probs=86.3
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHH
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
..+||+|||||++|+++|+.|++.| +|+|||+.+..++... +. ..+..
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~-----~~-----------------------~~~~~--- 139 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNV-----LH-----------------------LWPFT--- 139 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCE-----EE-----------------------CCHHH---
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCc-----cc-----------------------CChhH---
Confidence 4689999999999999999999999 9999999876432210 00 00111
Q ss_pred HHHhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecC
Q 006397 166 VCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTL 245 (647)
Q Consensus 166 ~~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~ 245 (647)
++.+..+|+.... +.+.. .... ......+...|.+.+.+ .|++++.++.|+++..++
T Consensus 140 --------~~~l~~~g~~~~~---~~~~~-----~~~~------~~~~~~l~~~L~~~~~~-~gv~v~~~~~v~~i~~~~ 196 (497)
T 2bry_A 140 --------IHDLRALGAKKFY---GRFCT-----GTLD------HISIRQLQLLLLKVALL-LGVEIHWGVKFTGLQPPP 196 (497)
T ss_dssp --------HHHHHTTTHHHHC---TTTTC-----TTCC------EEEHHHHHHHHHHHHHH-TTCEEEESCEEEEEECCC
T ss_pred --------HHHHHHcCCcccc---ccccc-----cccc------cCCHHHHHHHHHHHHHh-CCCEEEeCCEEEEEEEec
Confidence 1122222221000 00000 0000 01235677888888887 599999999999998742
Q ss_pred -CCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccccc
Q 006397 246 -DGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHI 283 (647)
Q Consensus 246 -~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~ 283 (647)
++ ...+|.+.+..+|+..++.|+.||+|+|+.+..
T Consensus 197 ~~~---~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 197 RKG---SGWRAQLQPNPPAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp STT---CCBEEEEESCCCHHHHTCCBSEEEECCCTTCCC
T ss_pred CCC---CEEEEEEEECCCCCEEEEEcCEEEECCCCCccc
Confidence 22 234555532214532358999999999998854
No 128
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.98 E-value=6.7e-10 Score=117.96 Aligned_cols=64 Identities=17% Similarity=0.038 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccccc
Q 006397 213 GREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHI 283 (647)
Q Consensus 213 g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~ 283 (647)
...+...|.+.+.+. |++++.++.|+++..++++ .+ .|.+.+ +|+..+++||.||.|+|..+.+
T Consensus 102 ~~~l~~~L~~~~~~~-g~~i~~~~~v~~i~~~~~~---~~-~v~~~~--~g~~~~~~a~~vV~AdG~~S~v 165 (394)
T 1k0i_A 102 QTEVTRDLMEAREAC-GATTVYQAAEVRLHDLQGE---RP-YVTFER--DGERLRLDCDYIAGCDGFHGIS 165 (394)
T ss_dssp HHHHHHHHHHHHHHT-TCEEESSCEEEEEECTTSS---SC-EEEEEE--TTEEEEEECSEEEECCCTTCST
T ss_pred hHHHHHHHHHHHHhc-CCeEEeceeEEEEEEecCC---ce-EEEEec--CCcEEEEEeCEEEECCCCCcHH
Confidence 346777888888875 9999999999999875322 22 344422 5765679999999999998864
No 129
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.98 E-value=5.6e-09 Score=114.31 Aligned_cols=149 Identities=17% Similarity=0.159 Sum_probs=88.3
Q ss_pred ccccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHH
Q 006397 85 SVKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETV 163 (647)
Q Consensus 85 ~~~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~ 163 (647)
.+.++||+|||||++||++|+.|+++| +|+||||.+...... . ++. + .+
T Consensus 9 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~-r---~~~--l---------------------~~--- 58 (499)
T 2qa2_A 9 HRSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGES-R---GLG--F---------------------TA--- 58 (499)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCC-C---SEE--E---------------------CH---
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCC-c---eeE--E---------------------CH---
Confidence 345789999999999999999999999 999999986543211 0 111 0 01
Q ss_pred HHHHHhhHHHHHHHHHcCCccccCCC--------CcccccccC-CccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEc
Q 006397 164 RVVCTEGPDRIRELIAIGASFDRGED--------GNLHLAREG-GHSHHRIVHAADMTGREIERALLEAVVSDPNISVFE 234 (647)
Q Consensus 164 ~~~~~~~~~~~~~l~~~G~~~~~~~~--------g~~~~~~~g-g~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~ 234 (647)
..++.++.+|+.-..... +...+.... ....+.. .......+...|.+.+.+. |++|+.
T Consensus 59 --------~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~l~~~L~~~~~~~-gv~v~~ 126 (499)
T 2qa2_A 59 --------RTMEVFDQRGILPAFGPVETSTQGHFGGRPVDFGVLEGAHYGV---KAVPQSTTESVLEEWALGR-GAELLR 126 (499)
T ss_dssp --------HHHHHHHHTTCGGGGCSCCEESEEEETTEEEEGGGSTTCCCEE---EEEEHHHHHHHHHHHHHHT-TCEEEE
T ss_pred --------HHHHHHHHCCCHHHHHhccccccceecceecccccCCCCCCce---EecCHHHHHHHHHHHHHhC-CCEEEc
Confidence 112223333332110000 000000000 0000000 0112456788888888875 999999
Q ss_pred ceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 235 HHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 235 ~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
+++|+++..++++ |. |.+.+ .+| ..+++|+.||.|+|+.+.
T Consensus 127 ~~~v~~i~~~~~~----v~-v~~~~-~~g-~~~~~a~~vVgADG~~S~ 167 (499)
T 2qa2_A 127 GHTVRALTDEGDH----VV-VEVEG-PDG-PRSLTTRYVVGCDGGRST 167 (499)
T ss_dssp SCEEEEEEECSSC----EE-EEEEC-SSC-EEEEEEEEEEECCCTTCH
T ss_pred CCEEEEEEEeCCE----EE-EEEEc-CCC-cEEEEeCEEEEccCcccH
Confidence 9999999887443 43 44443 334 357999999999999885
No 130
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.96 E-value=9e-09 Score=114.10 Aligned_cols=61 Identities=11% Similarity=0.029 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 213 GREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 213 g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
...+...|.+.+.+. |+++++|+++..++++ |. +.+.+..+|+..+++|+.||.|+|+.+.
T Consensus 137 ~~~l~~~L~~~a~~~----v~~~~~v~~~~~~~~~----v~-v~~~~~~~G~~~~i~a~~vVgADG~~S~ 197 (549)
T 2r0c_A 137 QHWLAPLLAEAVGER----LRTRSRLDSFEQRDDH----VR-ATITDLRTGATRAVHARYLVACDGASSP 197 (549)
T ss_dssp HHHHHHHHHHHHGGG----EECSEEEEEEEECSSC----EE-EEEEETTTCCEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHHHHh----cccCcEEEEEEEeCCE----EE-EEEEECCCCCEEEEEeCEEEECCCCCcH
Confidence 345677788887653 8999999999987443 43 5555544576568999999999999885
No 131
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.95 E-value=6e-09 Score=102.04 Aligned_cols=123 Identities=15% Similarity=0.105 Sum_probs=79.4
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHHH
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVV 166 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~ 166 (647)
++||+|||||++|+.+|+.|++.| +|+|||+.....| ..... ... .+....+
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G-~~~~~-----~~~-----------------~~~~~~~---- 55 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVM-MPFLP-----PKP-----------------PFPPGSL---- 55 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT-CCSSC-----CCS-----------------CCCTTCH----
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCC-cccCc-----ccc-----------------ccchhhH----
Confidence 589999999999999999999999 9999999742222 11100 000 0000000
Q ss_pred HHhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCC
Q 006397 167 CTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLD 246 (647)
Q Consensus 167 ~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~ 246 (647)
++.+. +..| . ....+...|.+.+++.+|++++ +++|+++..+ +
T Consensus 56 -------~~~~~--------d~~g---------~-----------~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~-~ 98 (232)
T 2cul_A 56 -------LERAY--------DPKD---------E-----------RVWAFHARAKYLLEGLRPLHLF-QATATGLLLE-G 98 (232)
T ss_dssp -------HHHHC--------CTTC---------C-----------CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEE-T
T ss_pred -------Hhhhc--------cCCC---------C-----------CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEe-C
Confidence 01110 0000 0 1345667788888764599999 5799999876 4
Q ss_pred CCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 247 GPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 247 g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
+ ++.+|.+ .+|+ .+.||.||+|+|.++.
T Consensus 99 ~---~v~~v~~---~~g~--~i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 99 N---RVVGVRT---WEGP--PARGEKVVLAVGSFLG 126 (232)
T ss_dssp T---EEEEEEE---TTSC--CEECSEEEECCTTCSS
T ss_pred C---EEEEEEE---CCCC--EEECCEEEECCCCChh
Confidence 4 6666654 3454 6899999999998753
No 132
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.95 E-value=5.2e-09 Score=111.25 Aligned_cols=156 Identities=17% Similarity=0.185 Sum_probs=86.8
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHH
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
.++||+|||||++|+++|+.|+++| +|+|+||.+.... . ..++.. .+.....
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~-~---~~~~~l-----------------------~~~~~~~ 57 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERA-I---NGADLL-----------------------KPAGIRV 57 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC-------CCCCEE-----------------------CHHHHHH
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCc-c---CceeeE-----------------------CchHHHH
Confidence 3589999999999999999999999 9999999864311 0 011110 0100000
Q ss_pred HHHhhHHHHHHHHHcCCcccc----CCCCcccccccC-CccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEE
Q 006397 166 VCTEGPDRIRELIAIGASFDR----GEDGNLHLAREG-GHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAID 240 (647)
Q Consensus 166 ~~~~~~~~~~~l~~~G~~~~~----~~~g~~~~~~~g-g~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~ 240 (647)
+... ...+.+...+.++.. ..+|........ ....+... .......+...|.+.+.+.+|++++++++|++
T Consensus 58 l~~~--g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~ 133 (399)
T 2x3n_A 58 VEAA--GLLAEVTRRGGRVRHELEVYHDGELLRYFNYSSVDARGYF--ILMPCESLRRLVLEKIDGEATVEMLFETRIEA 133 (399)
T ss_dssp HHHT--TCHHHHHHTTCEEECEEEEEETTEEEEEEETTSSCGGGCE--EECCHHHHHHHHHHHHTTCTTEEEECSCCEEE
T ss_pred HHHc--CcHHHHHHhCCCcceeEEEeCCCCEEEecchHHhcccCcc--ccccHHHHHHHHHHHhhhcCCcEEEcCCEEEE
Confidence 1000 001122222222210 111210000000 00000000 01234578888888887744899999999999
Q ss_pred EEecCCCCCceEE-EEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 241 LLTTLDGPDAVCH-GVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 241 l~~~~~g~~~~v~-Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
+..++++ ++ .|.+ .+|+ ++.||.||.|+|..+.
T Consensus 134 i~~~~~~----v~g~v~~---~~g~--~~~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 134 VQRDERH----AIDQVRL---NDGR--VLRPRVVVGADGIASY 167 (399)
T ss_dssp EEECTTS----CEEEEEE---TTSC--EEEEEEEEECCCTTCH
T ss_pred EEEcCCc----eEEEEEE---CCCC--EEECCEEEECCCCChH
Confidence 9886433 33 2332 4565 6899999999999885
No 133
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.93 E-value=2.1e-08 Score=110.70 Aligned_cols=57 Identities=14% Similarity=0.202 Sum_probs=45.8
Q ss_pred HHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 220 LLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 220 L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
+...++.+.|++++.++.|++++.+ ++ +++||.+.+ .+....+.|+.||||+|++..
T Consensus 216 ~~~~~~~r~nl~v~~~~~v~~i~~~-~~---~a~gv~~~~--~~~~~~~~a~~VILsAGai~S 272 (526)
T 3t37_A 216 LTKAVRGRKNLTILTGSRVRRLKLE-GN---QVRSLEVVG--RQGSAEVFADQIVLCAGALES 272 (526)
T ss_dssp SCHHHHTCTTEEEECSCEEEEEEEE-TT---EEEEEEEEE--TTEEEEEEEEEEEECSHHHHH
T ss_pred ccccccCCCCeEEEeCCEEEEEEec-CC---eEEEEEEEe--cCceEEEeecceEEcccccCC
Confidence 3344555679999999999999987 45 899999876 355668899999999998863
No 134
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.93 E-value=4.7e-09 Score=114.84 Aligned_cols=33 Identities=15% Similarity=0.346 Sum_probs=30.4
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
...|||||||.||+++|..|++.+ +|+|||+.+
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSS
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCC
Confidence 457999999999999999999999 999999875
No 135
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.91 E-value=3.9e-09 Score=112.71 Aligned_cols=50 Identities=16% Similarity=0.155 Sum_probs=38.6
Q ss_pred cceeEeCCCCcc-cccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhh
Q 006397 436 CGGVRAGLQGET-NVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHK 492 (647)
Q Consensus 436 ~GGi~vD~~~~T-~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~ 492 (647)
.|.|.||+.++| +.||+||+|||+ ++ +.. .....|...|+.|+.++..++
T Consensus 285 ~G~i~vd~~~~~~~~~~vfa~GD~~--~~-~~~----~~~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 285 GGFIPTDLNMVSIKYDNVYAVGDAN--SM-TVP----KLGYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp TSCBCBBTTSBBSSCTTEEECGGGB--TT-CCS----CCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEeCcccccCCCCCEEEeehhc--cC-CCC----cHHHHHHHHHHHHHHHHHHHh
Confidence 366999999999 899999999997 33 111 223457778999999998887
No 136
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=98.90 E-value=2.6e-08 Score=111.03 Aligned_cols=62 Identities=16% Similarity=0.148 Sum_probs=47.3
Q ss_pred HHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEc-CeEEECCCcccc
Q 006397 220 LLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFIS-KVTLLASGGAGH 282 (647)
Q Consensus 220 L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A-~~VVlAtGg~~~ 282 (647)
++..+.++.|++|+.++.|++|+.+++++..+++||.+.+ .+|+..+|+| +.||||+|+++.
T Consensus 236 ~l~~~~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~-~~g~~~~v~A~k~VILaaG~~~s 298 (587)
T 1gpe_A 236 WLLPNYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGT-NKAVNFDVFAKHEVLLAAGSAIS 298 (587)
T ss_dssp HTTTTTTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEE-ETTEEEEEEEEEEEEECSCTTTH
T ss_pred HHHHhhcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEe-CCCcEEEEEecccEEEccCCCCC
Confidence 3333334569999999999999987421112899999986 4688888999 999999999863
No 137
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.89 E-value=6.2e-09 Score=109.17 Aligned_cols=38 Identities=34% Similarity=0.567 Sum_probs=34.7
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g 124 (647)
.++||+|||||++|+++|++|+++| +|+||||.....|
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 4689999999999999999999999 9999999886654
No 138
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.88 E-value=9.6e-09 Score=109.52 Aligned_cols=156 Identities=15% Similarity=0.100 Sum_probs=83.4
Q ss_pred cccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHH
Q 006397 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVR 164 (647)
Q Consensus 86 ~~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~ 164 (647)
...+||+|||||++||++|+.|+++| +|+|+||....... ..++... +....
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~----~~~~~l~-----------------------~~~~~ 73 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPV----GAAISVW-----------------------PNGVK 73 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC--------CEEEEC-----------------------HHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCc----CeeEEEC-----------------------HHHHH
Confidence 45699999999999999999999999 99999998754211 1111110 11111
Q ss_pred HHHHhhHHHHHHHHHcCCcccc----CCC-CcccccccCCccccc-eeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEE
Q 006397 165 VVCTEGPDRIRELIAIGASFDR----GED-GNLHLAREGGHSHHR-IVHAADMTGREIERALLEAVVSDPNISVFEHHFA 238 (647)
Q Consensus 165 ~~~~~~~~~~~~l~~~G~~~~~----~~~-g~~~~~~~gg~~~~r-~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v 238 (647)
.+... ...+.+...+.+... ..+ |.............. ...........+...|.+.+.+ ++|+++++|
T Consensus 74 ~l~~l--g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~---~~i~~~~~v 148 (407)
T 3rp8_A 74 CMAHL--GMGDIMETFGGPLRRMAYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR---DSVQFGKRV 148 (407)
T ss_dssp HHHHT--TCHHHHHHHSCCCCEEEEEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG---GGEEESCCE
T ss_pred HHHHC--CCHHHHHhhcCCCcceEEEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc---CEEEECCEE
Confidence 11000 001122222222110 011 211110000000000 0000001245677788887754 889999999
Q ss_pred EEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccccc
Q 006397 239 IDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHI 283 (647)
Q Consensus 239 ~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~ 283 (647)
+++..++ + . +.+.. .+|+ ++.|+.||.|+|..+.+
T Consensus 149 ~~i~~~~-~---~---v~v~~-~~g~--~~~a~~vV~AdG~~S~v 183 (407)
T 3rp8_A 149 TRCEEDA-D---G---VTVWF-TDGS--SASGDLLIAADGSHSAL 183 (407)
T ss_dssp EEEEEET-T---E---EEEEE-TTSC--EEEESEEEECCCTTCSS
T ss_pred EEEEecC-C---c---EEEEE-cCCC--EEeeCEEEECCCcChHH
Confidence 9998874 3 2 33322 4565 68999999999988754
No 139
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.88 E-value=1.1e-08 Score=112.37 Aligned_cols=62 Identities=16% Similarity=0.158 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccccC
Q 006397 213 GREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIY 284 (647)
Q Consensus 213 g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~ 284 (647)
...+...|.+.+.+ .|++++.+ +|+++..++++ .+.+|.+ .+|+ ++.||.||.|+|..+.+.
T Consensus 172 ~~~l~~~L~~~a~~-~gv~~~~~-~v~~i~~~~~~---~~~~v~~---~~g~--~~~ad~vV~A~G~~S~~~ 233 (511)
T 2weu_A 172 ADEVARYLSEYAIA-RGVRHVVD-DVQHVGQDERG---WISGVHT---KQHG--EISGDLFVDCTGFRGLLI 233 (511)
T ss_dssp HHHHHHHHHHHHHH-TTCEEEEC-CEEEEEECTTS---CEEEEEE---SSSC--EEECSEEEECCGGGCCCC
T ss_pred HHHHHHHHHHHHHH-CCCEEEEC-eEeEEEEcCCC---CEEEEEE---CCCC--EEEcCEEEECCCcchHHH
Confidence 46788889988887 49999999 99999886555 5666654 3464 689999999999988654
No 140
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.88 E-value=4.1e-08 Score=105.11 Aligned_cols=57 Identities=14% Similarity=0.191 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 214 REIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 214 ~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
..+...|.+.+.+. |++|+++++|++|..+ ++ ++.||.+ . |+ ++.||.||+|+|.+.
T Consensus 196 ~~l~~~l~~~~~~~-G~~i~~~~~V~~i~~~-~~---~~~gv~~---~-g~--~~~ad~VV~a~~~~~ 252 (425)
T 3ka7_A 196 KGIIDALETVISAN-GGKIHTGQEVSKILIE-NG---KAAGIIA---D-DR--IHDADLVISNLGHAA 252 (425)
T ss_dssp HHHHHHHHHHHHHT-TCEEECSCCEEEEEEE-TT---EEEEEEE---T-TE--EEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHc-CCEEEECCceeEEEEE-CC---EEEEEEE---C-CE--EEECCEEEECCCHHH
Confidence 45888899999885 9999999999999987 45 7777754 2 54 689999999999765
No 141
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.86 E-value=7.9e-09 Score=111.28 Aligned_cols=58 Identities=12% Similarity=0.073 Sum_probs=42.2
Q ss_pred cceeEeCCCCcc-cccCcccccccccCCCCCCC--cc---CchhhHHHHHHHHHHHHHHHHhhhcc
Q 006397 436 CGGVRAGLQGET-NVRGLYVAGEVACTGLHGAN--RL---ASNSLLEALVFARRAVQPSIDHKKST 495 (647)
Q Consensus 436 ~GGi~vD~~~~T-~ipGLyAaGe~a~gG~~Ga~--rl---~g~sl~~a~v~G~~Ag~~a~~~~~~~ 495 (647)
.|.|.||+++|| +.|++||+|||+ ++.+.+ .+ .......|...|+.||.++..++...
T Consensus 283 ~G~i~Vd~~l~t~~~~~Ifa~GD~~--~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~ 346 (437)
T 3sx6_A 283 GGFVLVDEHQRSKKYANIFAAGIAI--AIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGR 346 (437)
T ss_dssp TSCBCBCTTSBBSSCTTEEECGGGB--CCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTS
T ss_pred CCcEEeChhccCCCCCCEEEEEEEe--ccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCC
Confidence 467999999998 899999999997 332211 11 01234567888999999999988654
No 142
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.86 E-value=1.6e-08 Score=111.88 Aligned_cols=62 Identities=13% Similarity=0.095 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccccC
Q 006397 213 GREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIY 284 (647)
Q Consensus 213 g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~ 284 (647)
...+...|.+.+.+ .|++++.+ .|+++..++++ .+.+|.+ .+|+ ++.||.||+|+|..+.+.
T Consensus 164 ~~~l~~~L~~~a~~-~gv~~~~~-~v~~i~~~~~g---~~~~v~~---~~g~--~i~ad~vV~A~G~~s~~~ 225 (538)
T 2aqj_A 164 AHLVADFLKRWAVE-RGVNRVVD-EVVDVRLNNRG---YISNLLT---KEGR--TLEADLFIDCSGMRGLLI 225 (538)
T ss_dssp HHHHHHHHHHHHHH-TTCEEEEC-CEEEEEECTTS---CEEEEEE---TTSC--EECCSEEEECCGGGCCCC
T ss_pred HHHHHHHHHHHHHH-CCCEEEEe-eEeEEEEcCCC---cEEEEEE---CCCc--EEEeCEEEECCCCchhhH
Confidence 46788889888887 49999999 89999886555 5556654 3464 689999999999988654
No 143
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.86 E-value=1.7e-08 Score=107.27 Aligned_cols=146 Identities=16% Similarity=0.153 Sum_probs=82.3
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHH
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
..+||+|||||++|+++|+.|+++| +|+|+||.+..... ..+|+.. .+
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~---~~~g~~l-----------------------~~----- 52 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSG---FGTGIVV-----------------------QP----- 52 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCC---CSCEEEC-----------------------CH-----
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCc---ccccccc-----------------------Ch-----
Confidence 3589999999999999999999999 99999998652111 1112211 11
Q ss_pred HHHhhHHHHHHHHHcCCcccc---CCCCcccccccCCccccceeecCC-CcHHHHHHHHHHHHHcCCCcEEEcceEEEEE
Q 006397 166 VCTEGPDRIRELIAIGASFDR---GEDGNLHLAREGGHSHHRIVHAAD-MTGREIERALLEAVVSDPNISVFEHHFAIDL 241 (647)
Q Consensus 166 ~~~~~~~~~~~l~~~G~~~~~---~~~g~~~~~~~gg~~~~r~~~~~~-~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l 241 (647)
...+.++.+|+.-.. ...+........+........... .....+...|.+.+ .+++++.++.|+++
T Consensus 53 ------~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~i~~~~~v~~i 123 (397)
T 2vou_A 53 ------ELVHYLLEQGVELDSISVPSSSMEYVDALTGERVGSVPADWRFTSYDSIYGGLYELF---GPERYHTSKCLVGL 123 (397)
T ss_dssp ------HHHHHHHHTTCCGGGTCBCCCEEEEEETTTCCEEEEEECCCCEEEHHHHHHHHHHHH---CSTTEETTCCEEEE
T ss_pred ------hHHHHHHHcCCccccccccccceEEEecCCCCccccccCcccccCHHHHHHHHHHhC---CCcEEEcCCEEEEE
Confidence 112334444442200 000000000001111100000000 11234555665554 38999999999999
Q ss_pred EecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 242 LTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 242 ~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
..++++ +. |.+ .+|+ ++.||.||.|+|..+.
T Consensus 124 ~~~~~~----v~-v~~---~~g~--~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 124 SQDSET----VQ-MRF---SDGT--KAEANWVIGADGGASV 154 (397)
T ss_dssp EECSSC----EE-EEE---TTSC--EEEESEEEECCCTTCH
T ss_pred EecCCE----EE-EEE---CCCC--EEECCEEEECCCcchh
Confidence 886433 32 322 4565 5899999999998875
No 144
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.85 E-value=2e-08 Score=110.99 Aligned_cols=61 Identities=20% Similarity=0.354 Sum_probs=48.1
Q ss_pred HHHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcC-eEEECCCccc
Q 006397 218 RALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISK-VTLLASGGAG 281 (647)
Q Consensus 218 ~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~-~VVlAtGg~~ 281 (647)
..++..+.++.|++|++++.|++|+.++++ +++||.+.+..+|+..+|+|+ .||+|+|++.
T Consensus 212 ~a~l~~a~~~~~~~i~~~~~V~~i~~~~~~---~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~ 273 (546)
T 2jbv_A 212 VSYIHPIVEQENFTLLTGLRARQLVFDADR---RCTGVDIVDSAFGHTHRLTARNEVVLSTGAID 273 (546)
T ss_dssp HHHTGGGTTCTTEEEECSCEEEEEEECTTS---BEEEEEEESSTTSCEEEEEEEEEEEECSHHHH
T ss_pred HHHHHHHhcCCCcEEEeCCEEEEEEECCCC---eEEEEEEEECCCCcEEEEEeCccEEEecCccC
Confidence 344555544569999999999999997435 899999876434777789997 9999999974
No 145
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.84 E-value=3e-08 Score=110.00 Aligned_cols=63 Identities=16% Similarity=0.110 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccccC
Q 006397 213 GREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIY 284 (647)
Q Consensus 213 g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~ 284 (647)
...+...|.+.+.+.+||+++.+ .|+++..++++ .+.+|.+ .+|+ ++.||.||+|+|..+.+.
T Consensus 193 ~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g---~~~~v~~---~~G~--~i~ad~vI~A~G~~S~~~ 255 (550)
T 2e4g_A 193 AHLVADFLRRFATEKLGVRHVED-RVEHVQRDANG---NIESVRT---ATGR--VFDADLFVDCSGFRGLLI 255 (550)
T ss_dssp HHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTS---CEEEEEE---TTSC--EEECSEEEECCGGGCCCC
T ss_pred HHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCC---CEEEEEE---CCCC--EEECCEEEECCCCchhhH
Confidence 45688888888877349999999 99999876555 5666654 3464 689999999999988653
No 146
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.84 E-value=7.3e-08 Score=105.59 Aligned_cols=58 Identities=12% Similarity=0.089 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 214 REIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 214 ~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
..+...|.+.+++. |++|+.+++|++|..+ ++ +++||.+ .+|+ ++.||.||.+++...
T Consensus 221 ~~l~~aL~~~~~~~-Gg~I~~~~~V~~I~~~-~~---~~~gV~~---~~g~--~~~ad~VV~~a~~~~ 278 (501)
T 4dgk_A 221 GALVQGMIKLFQDL-GGEVVLNARVSHMETT-GN---KIEAVHL---EDGR--RFLTQAVASNADVVH 278 (501)
T ss_dssp HHHHHHHHHHHHHT-TCEEECSCCEEEEEEE-TT---EEEEEEE---TTSC--EEECSCEEECCC---
T ss_pred cchHHHHHHHHHHh-CCceeeecceeEEEee-CC---eEEEEEe---cCCc--EEEcCEEEECCCHHH
Confidence 46888899999885 9999999999999987 55 7888876 4565 689999999988554
No 147
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.83 E-value=1.1e-08 Score=107.90 Aligned_cols=146 Identities=16% Similarity=0.121 Sum_probs=83.4
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHH
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRV 165 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~ 165 (647)
..+||+|||||++|+++|+.|+++| +|+|+||....+.. ..++... +.....
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~----~~~~~l~-----------------------~~~~~~ 62 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAF----GAGIYLW-----------------------HNGLRV 62 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCC----SSEEEEE-----------------------HHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCC----CceEEeC-----------------------ccHHHH
Confidence 3589999999999999999999999 99999998765321 1111111 000000
Q ss_pred HHHhhHHHHHHHHHcCCcccc----CCCCcccccccC-CccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEE
Q 006397 166 VCTEGPDRIRELIAIGASFDR----GEDGNLHLAREG-GHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAID 240 (647)
Q Consensus 166 ~~~~~~~~~~~l~~~G~~~~~----~~~g~~~~~~~g-g~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~ 240 (647)
+... ...+.+...+.+... .. |........ +. + . .......+...|.+.+.+. |++++.+++|++
T Consensus 63 l~~~--g~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~--~-~---~~~~r~~l~~~L~~~~~~~-gv~i~~~~~v~~ 132 (379)
T 3alj_A 63 LEGL--GALDDVLQGSHTPPTYETWMH-NKSVSKETFNGL--P-W---RIMTRSHLHDALVNRARAL-GVDISVNSEAVA 132 (379)
T ss_dssp HHHT--TCHHHHHTTCBCCSCEEEEET-TEEEEEECGGGC--C-E---EEEEHHHHHHHHHHHHHHT-TCEEESSCCEEE
T ss_pred HHHc--CCHHHHHhhCCCccceEEEeC-CceeeeccCCCC--c-e---EEECHHHHHHHHHHHHHhc-CCEEEeCCEEEE
Confidence 0000 001112222211110 00 111000000 00 0 0 0112457888888888875 999999999999
Q ss_pred EEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 241 LLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 241 l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
+.. + . .|.+ .+|+ ++.||.||.|+|..+.
T Consensus 133 i~~--~----~--~v~~---~~g~--~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 133 ADP--V----G--RLTL---QTGE--VLEADLIVGADGVGSK 161 (379)
T ss_dssp EET--T----T--EEEE---TTSC--EEECSEEEECCCTTCH
T ss_pred EEe--C----C--EEEE---CCCC--EEEcCEEEECCCccHH
Confidence 975 2 1 2332 3465 6899999999998875
No 148
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.82 E-value=3.5e-09 Score=125.61 Aligned_cols=48 Identities=10% Similarity=0.008 Sum_probs=40.1
Q ss_pred ceeEeCC-CCcccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhh
Q 006397 437 GGVRAGL-QGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKK 493 (647)
Q Consensus 437 GGi~vD~-~~~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~ 493 (647)
|.|.||+ .++|++||+||+|||+ ++. ....+|+..|+.||.++..|+.
T Consensus 460 G~I~vd~~~~~Ts~~~VfA~GD~~-~~~--------~~~~~A~~~G~~aA~~i~~~L~ 508 (1025)
T 1gte_A 460 DLPEVDPETMQTSEPWVFAGGDIV-GMA--------NTTVESVNDGKQASWYIHKYIQ 508 (1025)
T ss_dssp SSBCCCTTTCBCSSTTEEECSGGG-CSC--------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEECCCCCccCCCCEEEeCCCC-CCc--------hHHHHHHHHHHHHHHHHHHHHH
Confidence 6799997 7999999999999998 332 1356788899999999998875
No 149
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.82 E-value=1.3e-09 Score=119.17 Aligned_cols=36 Identities=22% Similarity=0.393 Sum_probs=31.9
Q ss_pred cccccEEEECCcHHHHHHHHHHHhc--C-CeEEEEecCC
Q 006397 86 VKYFDFSVIGSGVAGLCYALEVAKH--G-TVAVITKAEP 121 (647)
Q Consensus 86 ~~~~DVvIIGgG~AGl~aA~~la~~--G-~V~vlEk~~~ 121 (647)
+..+||+|||||+||++||..|++. | +|+|||+.+.
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~ 47 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPE 47 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSS
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 3468999999999999999999887 6 9999999864
No 150
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.82 E-value=4.1e-08 Score=108.30 Aligned_cols=63 Identities=8% Similarity=0.157 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccccC
Q 006397 213 GREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIY 284 (647)
Q Consensus 213 g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~ 284 (647)
...+...|.+.+.+..|++++.+ .|+++..++++ .+++|.. .+|+ .+.|+.||.|+|..+.+.
T Consensus 174 r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g---~~~~v~~---~~g~--~i~ad~vV~AdG~~S~~~ 236 (526)
T 2pyx_A 174 AAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHG---DIEKLIT---KQNG--EISGQLFIDCTGAKSLLL 236 (526)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTS---CEEEEEE---SSSC--EEECSEEEECSGGGCCCC
T ss_pred HHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCC---cEEEEEE---CCCC--EEEcCEEEECCCcchHHH
Confidence 45678888888887249999999 59999876555 5556654 3454 489999999999988653
No 151
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.81 E-value=2e-08 Score=113.26 Aligned_cols=69 Identities=9% Similarity=0.076 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHcCCCc--EEEcceEEEEEEecCCCCCceEEEEEEEec---CCCeEEEEEcCeEEECCCccccc
Q 006397 213 GREIERALLEAVVSDPNI--SVFEHHFAIDLLTTLDGPDAVCHGVDTLNV---ETQEVVRFISKVTLLASGGAGHI 283 (647)
Q Consensus 213 g~~~~~~L~~~~~~~~gv--~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~---~~G~~~~i~A~~VVlAtGg~~~~ 283 (647)
...+...|.+.+.+. |+ +|+.+++|+++..++++.. ..+.|.+.+. .+|+..+++|+.||.|+|+.+.+
T Consensus 140 q~~l~~~L~~~a~~~-g~~v~v~~~~~v~~l~~~~~~~~-~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~v 213 (639)
T 2dkh_A 140 QARVHDHYLERMRNS-PSRLEPHYARRVLDVKVDHGAAD-YPVTVTLERCDAAHAGQIETVQARYVVGCDGARSNV 213 (639)
T ss_dssp HHHHHHHHHHHHHHS-TTCCCCBCSEEEEEEEECTTCSS-CCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCHH
T ss_pred HHHHHHHHHHHHHhC-CCCcEEecCCEEEEEEECCCCCc-CCEEEEEEeccccCCCCeEEEEeCEEEECCCcchHH
Confidence 456888899999885 55 9999999999998743100 1234555431 24655689999999999998853
No 152
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.80 E-value=2e-09 Score=112.32 Aligned_cols=46 Identities=28% Similarity=0.302 Sum_probs=40.4
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-------CeEEEEecCCCCCccccccCCeee
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG-------TVAVITKAEPHESNTNYAQGGVSA 135 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G-------~V~vlEk~~~~~g~s~~a~Ggi~~ 135 (647)
||+|||||++|+++|+.|+++| +|+|||+.....++|..+.|.+..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~aS~~~~g~~~~ 54 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLTTTDVAAGLWQP 54 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGSGGGTCCCBCCC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCCccccCcceeec
Confidence 8999999999999999999984 899999998777777777776654
No 153
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.80 E-value=6.8e-09 Score=114.55 Aligned_cols=53 Identities=13% Similarity=0.093 Sum_probs=41.5
Q ss_pred CCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEE---EcCeEEECCCccc
Q 006397 227 DPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRF---ISKVTLLASGGAG 281 (647)
Q Consensus 227 ~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i---~A~~VVlAtGg~~ 281 (647)
+.|++|++++.|++|+.++++ ..+++||.+.+ .+|+..++ .++.||||+|++.
T Consensus 206 ~~~~~v~~~~~v~~i~~~~~~-~~~~~GV~~~~-~~g~~~~~~v~a~k~VILaaGa~~ 261 (536)
T 1ju2_A 206 SNNLRVGVHASVEKIIFSNAP-GLTATGVIYRD-SNGTPHQAFVRSKGEVIVSAGTIG 261 (536)
T ss_dssp TTTEEEEESCEEEEEEECCSS-SCBEEEEEEEC-TTSCEEEEEEEEEEEEEECCHHHH
T ss_pred CCCcEEEeCCEEEEEEECCCC-CCEEEEEEEEe-CCCceEEEEeccCCEEEEcCcccC
Confidence 469999999999999987431 12799999876 35665555 5699999999985
No 154
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.79 E-value=1.9e-08 Score=111.44 Aligned_cols=60 Identities=15% Similarity=0.225 Sum_probs=46.1
Q ss_pred HHHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeE--E-EEEcCeEEECCCccc
Q 006397 218 RALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEV--V-RFISKVTLLASGGAG 281 (647)
Q Consensus 218 ~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~--~-~i~A~~VVlAtGg~~ 281 (647)
..+++.+.++.|++|+.++.|++|+.+ ++ +++||.+.+..+|+. . .+.++.||+|+|+++
T Consensus 199 ~~~l~~~~~~~~~~i~~~~~V~~i~~~-~~---~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~ 261 (546)
T 1kdg_A 199 ATYLQTALARPNFTFKTNVMVSNVVRN-GS---QILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFG 261 (546)
T ss_dssp HTHHHHHHTCTTEEEECSCCEEEEEEE-TT---EEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHH
T ss_pred HHHHHHHhhCCCcEEEeCCEEEEEEEe-CC---EEEEEEEEecCCCceeEEEEEeCCEEEEcCChhc
Confidence 446666666579999999999999987 45 899999865334642 2 337899999999975
No 155
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.77 E-value=9e-09 Score=110.61 Aligned_cols=57 Identities=7% Similarity=0.067 Sum_probs=41.8
Q ss_pred c-eeEeCCCCcc-cccCcccccccccCCCCCC--Ccc---CchhhHHHHHHHHHHHHHHHHhhhcc
Q 006397 437 G-GVRAGLQGET-NVRGLYVAGEVACTGLHGA--NRL---ASNSLLEALVFARRAVQPSIDHKKST 495 (647)
Q Consensus 437 G-Gi~vD~~~~T-~ipGLyAaGe~a~gG~~Ga--~rl---~g~sl~~a~v~G~~Ag~~a~~~~~~~ 495 (647)
| .|.||+++|| ++||+||+|||+ ++.+. ..+ .......|...|+.|+.++.+++...
T Consensus 272 G~~i~Vd~~l~t~~~~~Ifa~GD~~--~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~ 335 (430)
T 3h28_A 272 NKMVIVNRCFQNPTYKNIFGVGVVT--AIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNN 335 (430)
T ss_dssp TCCBCCCTTSBCSSSTTEEECSTTB--CCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCEEecCccccCCCCCCEEEEEeee--ccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCC
Confidence 6 6999999998 999999999997 33221 000 01234567888999999999988654
No 156
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.77 E-value=2.7e-08 Score=102.85 Aligned_cols=38 Identities=26% Similarity=0.459 Sum_probs=34.3
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCc
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESN 125 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~ 125 (647)
.+||+|||||++|+++|+.|++.| +|+||||....+|.
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~ 40 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGR 40 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCccc
Confidence 379999999999999999999999 99999998766553
No 157
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.72 E-value=8.8e-08 Score=107.38 Aligned_cols=53 Identities=8% Similarity=0.125 Sum_probs=45.2
Q ss_pred CCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 228 PNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 228 ~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
+|++|++++.|++|+.++++ .++.||.+.+..+|+..++.|+.||+|+|....
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~--~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s 325 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALN--SEIESLHIHDLISGDRFEIKADVYVLTAGAVHN 325 (623)
T ss_dssp EEEEEECSEEEEEEEECTTS--SCEEEEEEEETTTCCEEEECEEEEEECSCTTHH
T ss_pred CCEEEEeCCEEEEEEEECCC--CEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCC
Confidence 58999999999999986433 279999998866788888999999999998764
No 158
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.71 E-value=1e-07 Score=104.35 Aligned_cols=60 Identities=17% Similarity=0.255 Sum_probs=46.5
Q ss_pred HHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCC---eEEEEEcCeEEECCCccc
Q 006397 219 ALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQ---EVVRFISKVTLLASGGAG 281 (647)
Q Consensus 219 ~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G---~~~~i~A~~VVlAtGg~~ 281 (647)
.++..+.++.|++|+.++.|++|+.++++ .+++||.+.+ .+| +..+++|+.||||+|+++
T Consensus 226 ~~l~~a~~~~n~~i~~~~~V~~i~~~~~g--~~~~gV~~~~-~~g~~~~~~~v~A~~VIlaaG~~~ 288 (504)
T 1n4w_A 226 TYLAAALGTGKVTIQTLHQVKTIRQTKDG--GYALTVEQKD-TDGKLLATKEISCRYLFLGAGSLG 288 (504)
T ss_dssp THHHHHHHTTSEEEEESEEEEEEEECTTS--SEEEEEEEEC-TTCCEEEEEEEEEEEEEECSHHHH
T ss_pred HHHHHHHhcCCcEEEeCCEEEEEEECCCC--CEEEEEEEeC-CCCccceeEEEeeCEEEEccCCCC
Confidence 34455555557999999999999987433 2799999875 345 567899999999999985
No 159
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.68 E-value=6.7e-07 Score=95.57 Aligned_cols=55 Identities=7% Similarity=0.154 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 214 REIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 214 ~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
..+...|.+.+.+. |++|+++++|++|..+ ++ ++ | . .+|+ .+.||.||+|+|...
T Consensus 189 ~~l~~~l~~~~~~~-G~~i~~~~~V~~i~~~-~~---~v--V---~-~~g~--~~~ad~Vv~a~~~~~ 243 (421)
T 3nrn_A 189 KAVIDELERIIMEN-KGKILTRKEVVEINIE-EK---KV--Y---T-RDNE--EYSFDVAISNVGVRE 243 (421)
T ss_dssp HHHHHHHHHHHHTT-TCEEESSCCEEEEETT-TT---EE--E---E-TTCC--EEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHC-CCEEEcCCeEEEEEEE-CC---EE--E---E-eCCc--EEEeCEEEECCCHHH
Confidence 56888899988875 9999999999999876 44 44 2 2 2354 689999999999764
No 160
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.67 E-value=9.1e-08 Score=108.22 Aligned_cols=35 Identities=31% Similarity=0.503 Sum_probs=32.5
Q ss_pred ccccEEEECCcHHHHHHHHHHHh-----cC-CeEEEEecCC
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAK-----HG-TVAVITKAEP 121 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~-----~G-~V~vlEk~~~ 121 (647)
.++||+|||||++||++|+.|++ .| +|+||||.+.
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 46899999999999999999999 99 9999999764
No 161
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.66 E-value=2.4e-07 Score=100.43 Aligned_cols=65 Identities=8% Similarity=-0.053 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHcCCCcE--EEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 213 GREIERALLEAVVSDPNIS--VFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 213 g~~~~~~L~~~~~~~~gv~--i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
...+...|.+.+.+. |++ ++.++.|+++..++++ ....|.+.+..+|+..++.+|.||+|||.++
T Consensus 100 ~~~l~~~l~~~~~~~-gv~~~i~~~~~V~~v~~~~~~---~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~s 166 (464)
T 2xve_A 100 REVLWDYIKGRVEKA-GVRKYIRFNTAVRHVEFNEDS---QTFTVTVQDHTTDTIYSEEFDYVVCCTGHFS 166 (464)
T ss_dssp HHHHHHHHHHHHHHH-TCGGGEECSEEEEEEEEETTT---TEEEEEEEETTTTEEEEEEESEEEECCCSSS
T ss_pred HHHHHHHHHHHHHHc-CCcceEEeCCEEEEEEEcCCC---CcEEEEEEEcCCCceEEEEcCEEEECCCCCC
Confidence 456667777777664 887 8999999999876432 1223555443456556799999999999654
No 162
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.65 E-value=8.2e-08 Score=101.94 Aligned_cols=36 Identities=25% Similarity=0.418 Sum_probs=33.1
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCC
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPH 122 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~ 122 (647)
..+||+|||||++|+++|+.|++.| +|+|+||.+..
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 61 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDR 61 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSST
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCc
Confidence 4589999999999999999999999 99999998654
No 163
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.63 E-value=5.2e-07 Score=98.98 Aligned_cols=41 Identities=24% Similarity=0.285 Sum_probs=37.0
Q ss_pred cccccEEEECCcHHHHHHHHHHHhc-C-CeEEEEecCCCCCcc
Q 006397 86 VKYFDFSVIGSGVAGLCYALEVAKH-G-TVAVITKAEPHESNT 126 (647)
Q Consensus 86 ~~~~DVvIIGgG~AGl~aA~~la~~-G-~V~vlEk~~~~~g~s 126 (647)
+.++||||||||++||+||++|+++ | +|+|+|+.+..||..
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~ 50 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLA 50 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGG
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCe
Confidence 4579999999999999999999985 8 999999999888854
No 164
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.61 E-value=3.5e-07 Score=94.83 Aligned_cols=36 Identities=22% Similarity=0.298 Sum_probs=33.2
Q ss_pred ccEEEECCcHHHHHHHHHHHh---cC-CeEEEEecCCCCC
Q 006397 89 FDFSVIGSGVAGLCYALEVAK---HG-TVAVITKAEPHES 124 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~---~G-~V~vlEk~~~~~g 124 (647)
+||+|||||++|+++|+.|++ .| +|+|+||....+|
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg 41 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGG 41 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCG
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCcc
Confidence 599999999999999999999 99 9999999876655
No 165
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.60 E-value=4e-07 Score=98.22 Aligned_cols=64 Identities=9% Similarity=-0.086 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCe-EEEEEcCeEEECCCcccc
Q 006397 213 GREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQE-VVRFISKVTLLASGGAGH 282 (647)
Q Consensus 213 g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~-~~~i~A~~VVlAtGg~~~ 282 (647)
...+...|.+.+.+. ++.++.++.|+++..++ + .+ -|.+.+..+|+ ..++.+|.||+|||.++.
T Consensus 114 ~~~l~~~l~~~~~~~-~~~i~~~t~V~~v~~~~-~---~~-~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 114 RHTIQEYQRIYAQPL-LPFIKLATDVLDIEKKD-G---SW-VVTYKGTKAGSPISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp HHHHHHHHHHHHGGG-GGGEECSEEEEEEEEET-T---EE-EEEEEESSTTCCEEEEEESEEEECCCSSSS
T ss_pred HHHHHHHHHHHHHHh-hCeEEeCCEEEEEEeCC-C---eE-EEEEeecCCCCeeEEEEeCEEEECCCCCCC
Confidence 345666666666654 78899999999997753 3 22 24444433355 456899999999998753
No 166
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.60 E-value=5.1e-07 Score=97.77 Aligned_cols=37 Identities=16% Similarity=0.263 Sum_probs=33.4
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC------CeEEEEecCCCC
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG------TVAVITKAEPHE 123 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G------~V~vlEk~~~~~ 123 (647)
..+||+|||||++|+++|+.|++.| +|+|||+.+..+
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g 71 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR 71 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC
Confidence 4589999999999999999999987 899999988654
No 167
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.60 E-value=1.3e-07 Score=104.25 Aligned_cols=135 Identities=20% Similarity=0.132 Sum_probs=80.9
Q ss_pred ccccEEEECCcHHHHHHHHHHH-hcC-CeEEEEecCCCCCcccccc--CCeeeecCCCCCHHHHHHHHHHhcCCCCCHHH
Q 006397 87 KYFDFSVIGSGVAGLCYALEVA-KHG-TVAVITKAEPHESNTNYAQ--GGVSAVLCPSDSVESHMQDTIVAGAYLCDDET 162 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la-~~G-~V~vlEk~~~~~g~s~~a~--Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~ 162 (647)
.++||+|||||++|+++|+.|+ +.| +|+|+|+.+..+|....+. |..+...... -.....+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~-------------~~~~~~~~~ 73 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHL-------------YRFSFDRDL 73 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGG-------------SSCCSCHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcce-------------eeecccccc
Confidence 4689999999999999999999 899 9999999876654322111 1100000000 000000000
Q ss_pred HHHHHHhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCc--EEEcceEEEE
Q 006397 163 VRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNI--SVFEHHFAID 240 (647)
Q Consensus 163 ~~~~~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv--~i~~~~~v~~ 240 (647)
...++. .. .-..+..+...+.+.+.+. ++ .+++++.|++
T Consensus 74 --------------~~~~~~--~~----------------------~~~~~~ei~~~l~~~~~~~-g~~~~i~~~~~V~~ 114 (540)
T 3gwf_A 74 --------------LQESTW--KT----------------------TYITQPEILEYLEDVVDRF-DLRRHFKFGTEVTS 114 (540)
T ss_dssp --------------HHHCCC--SB----------------------SEEEHHHHHHHHHHHHHHT-TCGGGEEESCCEEE
T ss_pred --------------ccCCCC--cc----------------------cCCCHHHHHHHHHHHHHHc-CCcceeEeccEEEE
Confidence 001111 00 0012456666777777664 77 8999999999
Q ss_pred EEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 241 LLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 241 l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
+..++++ ....|.+ .+|+ ++.|+.||+|||.++
T Consensus 115 i~~~~~~---~~~~V~~---~~G~--~i~ad~lV~AtG~~s 147 (540)
T 3gwf_A 115 ALYLDDE---NLWEVTT---DHGE--VYRAKYVVNAVGLLS 147 (540)
T ss_dssp EEEETTT---TEEEEEE---TTSC--EEEEEEEEECCCSCC
T ss_pred EEEeCCC---CEEEEEE---cCCC--EEEeCEEEECCcccc
Confidence 9887543 2222332 4565 689999999999755
No 168
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.60 E-value=1.3e-07 Score=104.44 Aligned_cols=136 Identities=17% Similarity=0.153 Sum_probs=80.4
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCcccccc-CCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHH
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQ-GGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVR 164 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~-Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~ 164 (647)
..+||+|||||++|+++|+.|++.| +|+|+|+....+|....+. -|........ . -.....+..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~-~-----------y~~~f~~~~-- 85 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESI-D-----------YSYSFSPEL-- 85 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTT-T-----------SSCCSCHHH--
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCch-h-----------ccccccccc--
Confidence 4689999999999999999999999 9999999876654222111 0110000000 0 000000000
Q ss_pred HHHHhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCc--EEEcceEEEEEE
Q 006397 165 VVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNI--SVFEHHFAIDLL 242 (647)
Q Consensus 165 ~~~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv--~i~~~~~v~~l~ 242 (647)
...+.. . ..-..+..+...+.+.+.+. ++ .++.+++|+++.
T Consensus 86 ------------~~~~~~--~----------------------~~~~~~~ei~~yl~~~~~~~-g~~~~i~~~~~V~~i~ 128 (549)
T 4ap3_A 86 ------------EQEWNW--S----------------------EKYATQPEILAYLEHVADRF-DLRRDIRFDTRVTSAV 128 (549)
T ss_dssp ------------HHHCCC--S----------------------SSSCBHHHHHHHHHHHHHHT-TCGGGEECSCCEEEEE
T ss_pred ------------ccCCCC--c----------------------cCCCCHHHHHHHHHHHHHHc-CCCccEEECCEEEEEE
Confidence 001100 0 00112456666676667664 77 899999999998
Q ss_pred ecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 243 TTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 243 ~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
.++++ ....|.+ .+|+ ++.|+.||+|||.++
T Consensus 129 ~~~~~---~~w~V~~---~~G~--~i~ad~lV~AtG~~s 159 (549)
T 4ap3_A 129 LDEEG---LRWTVRT---DRGD--EVSARFLVVAAGPLS 159 (549)
T ss_dssp EETTT---TEEEEEE---TTCC--EEEEEEEEECCCSEE
T ss_pred EcCCC---CEEEEEE---CCCC--EEEeCEEEECcCCCC
Confidence 76543 2222332 4565 589999999999654
No 169
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=98.58 E-value=5e-07 Score=98.94 Aligned_cols=60 Identities=10% Similarity=0.204 Sum_probs=46.1
Q ss_pred HHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCC---eEEEEEcCeEEECCCccc
Q 006397 219 ALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQ---EVVRFISKVTLLASGGAG 281 (647)
Q Consensus 219 ~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G---~~~~i~A~~VVlAtGg~~ 281 (647)
.++..++++.|++|+.++.|++|+.++++ .+++||.+.+ .+| +..+++|+.||||+|++.
T Consensus 231 ~~l~~a~~~~n~~i~~~~~v~~i~~~~~g--~~~~gV~~~~-~~g~~~~~~~~~A~~VIlaaGa~~ 293 (507)
T 1coy_A 231 TYLAQAAATGKLTITTLHRVTKVAPATGS--GYSVTMEQID-EQGNVVATKVVTADRVFFAAGSVG 293 (507)
T ss_dssp THHHHHHHTTCEEEECSEEEEEEEECSSS--SEEEEEEEEC-TTSCEEEEEEEEEEEEEECSHHHH
T ss_pred HHHHHHHhcCCcEEEeCCEEEEEEECCCC--CEEEEEEEeC-CCCcccccEEEEeCEEEEccCccC
Confidence 34445555557999999999999987533 2799999875 245 466899999999999985
No 170
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.54 E-value=3.1e-07 Score=101.55 Aligned_cols=38 Identities=29% Similarity=0.418 Sum_probs=34.8
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g 124 (647)
.++||+|||||++|+++|+.|++.| +|+|+|+....+|
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG 53 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGG 53 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCC
Confidence 4689999999999999999999999 9999999876654
No 171
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.54 E-value=3.1e-07 Score=97.53 Aligned_cols=34 Identities=29% Similarity=0.682 Sum_probs=31.1
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPH 122 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~ 122 (647)
.+|+|||||++||++|+.|+++| +|+|+||.+..
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 36999999999999999999999 99999997643
No 172
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.54 E-value=5.8e-07 Score=96.32 Aligned_cols=39 Identities=26% Similarity=0.434 Sum_probs=35.1
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccc
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTN 127 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~ 127 (647)
+||+|||||++|++||+.|+++| +|+|||+....+|.+.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 41 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAY 41 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCC
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeec
Confidence 79999999999999999999999 9999999776666543
No 173
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.52 E-value=3.7e-07 Score=97.95 Aligned_cols=57 Identities=7% Similarity=0.036 Sum_probs=39.2
Q ss_pred ceeEeCCCCc-ccccCcccccccccCCCCCCC-c--cCc--hhhHHHHHHHHHHHHHHHHhhhcc
Q 006397 437 GGVRAGLQGE-TNVRGLYVAGEVACTGLHGAN-R--LAS--NSLLEALVFARRAVQPSIDHKKST 495 (647)
Q Consensus 437 GGi~vD~~~~-T~ipGLyAaGe~a~gG~~Ga~-r--l~g--~sl~~a~v~G~~Ag~~a~~~~~~~ 495 (647)
|.|.||+++| |+.|++||+|||+ .+...+ + ..+ .+-..|.-.|+.+|++++..++..
T Consensus 273 g~i~vd~~lq~t~~~~IfAiGD~a--~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g~ 335 (430)
T 3hyw_A 273 KMVIVNRCFQNPTYKNIFGVGVVT--AIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNN 335 (430)
T ss_dssp CCBCCCTTSBCSSSTTEEECSTTB--CCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred eEEEecccccCCCCCCEEEeccEE--ecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4588999999 8999999999997 332211 0 001 111346678999999998877654
No 174
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.52 E-value=6.4e-07 Score=96.25 Aligned_cols=58 Identities=9% Similarity=0.067 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcc
Q 006397 214 REIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGA 280 (647)
Q Consensus 214 ~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 280 (647)
..+..+|.+.+++. |++|+.+++|++|..++++ ++.||.+ .+|+ ++.|+.||.++|-+
T Consensus 256 ~~L~~aL~r~~~~~-Gg~i~l~t~V~~I~~d~~g---~v~gV~~---~~G~--~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAIN-GGTFMLNKNVVDFVFDDDN---KVCGIKS---SDGE--IAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC---CEESSCCEEEEEECTTS---CEEEEEE---TTSC--EEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHc-CCEEEeCCeEEEEEEecCC---eEEEEEE---CCCc--EEECCEEEECCCcc
Confidence 46888999999885 9999999999999984456 7888876 3465 58999999999855
No 175
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.51 E-value=7e-07 Score=93.41 Aligned_cols=33 Identities=27% Similarity=0.566 Sum_probs=31.3
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC--CeEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~ 120 (647)
++||+|||||++|+++|+.|++.| +|+|+|+..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC
Confidence 589999999999999999999999 699999987
No 176
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.50 E-value=2.3e-07 Score=102.46 Aligned_cols=38 Identities=32% Similarity=0.428 Sum_probs=34.6
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g 124 (647)
..+||+|||||++|+++|+.|++.| +|+|||+.+..+|
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GG 46 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGG 46 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCC
Confidence 4689999999999999999999999 9999999876554
No 177
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.49 E-value=6.7e-08 Score=95.87 Aligned_cols=38 Identities=26% Similarity=0.459 Sum_probs=34.9
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCc
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESN 125 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~ 125 (647)
++||+|||||||||+||+.|+++| +|+|+||.+.++|.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~ 40 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGR 40 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCc
Confidence 489999999999999999999999 99999998876653
No 178
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.46 E-value=2.9e-06 Score=89.91 Aligned_cols=54 Identities=19% Similarity=0.139 Sum_probs=38.7
Q ss_pred cceeEeCCC-Cc-ccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhhcc
Q 006397 436 CGGVRAGLQ-GE-TNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKST 495 (647)
Q Consensus 436 ~GGi~vD~~-~~-T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~~ 495 (647)
.|.|.||++ .+ |+.||+||+|||+ ++.. + ...-..|.-.|+.+++++...++..
T Consensus 271 ~G~i~VD~~tl~~t~~p~VfAiGDva-~~~~--~---pk~a~~A~~qa~v~A~ni~~~l~G~ 326 (401)
T 3vrd_B 271 SGWCPVDIRTFESSLQPGIHVIGDAC-NAAP--M---PKSAYSANSQAKVAAAAVVALLKGE 326 (401)
T ss_dssp TSSBCBCTTTCBBSSSTTEEECGGGB-CCTT--S---CBSHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCEEECCCcceecCCCCEEEecccc-cCCC--C---CchHHHHHHHHHHHHHHHHHHhcCC
Confidence 466999987 44 8999999999997 3321 0 1122346678999999999887654
No 179
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.37 E-value=3.7e-06 Score=90.13 Aligned_cols=58 Identities=12% Similarity=0.063 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 214 REIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 214 ~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
..+..+|.+.+++. |++|+.+++|++|..+ ++ ++.+|.. +|+ ++.||.||+|+|.+..
T Consensus 234 ~~l~~~l~~~~~~~-G~~i~~~~~V~~I~~~-~~---~v~~v~~----~g~--~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIY-GGTYMLNKPVDDIIME-NG---KVVGVKS----EGE--VARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHH-TCCCBCSCCCCEEEEE-TT---EEEEEEE----TTE--EEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHc-CCEEECCCEEEEEEEe-CC---EEEEEEE----CCe--EEECCEEEECCCCCcc
Confidence 46888888888775 9999999999999886 45 6777652 354 6899999999998754
No 180
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.36 E-value=8.9e-06 Score=93.02 Aligned_cols=38 Identities=26% Similarity=0.391 Sum_probs=34.8
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g 124 (647)
..+||+|||||++|++||+.|++.| +|+|+|+....+|
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 4589999999999999999999999 9999999877666
No 181
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.35 E-value=1.6e-06 Score=94.23 Aligned_cols=39 Identities=18% Similarity=0.340 Sum_probs=34.8
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC---CeEEEEecCCCCCccc
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG---TVAVITKAEPHESNTN 127 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G---~V~vlEk~~~~~g~s~ 127 (647)
+||+|||||++||+||++|+++| +|+|+|+....+|.+.
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~ 44 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIR 44 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCC
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceE
Confidence 69999999999999999999999 6999999887776553
No 182
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.30 E-value=2e-06 Score=93.05 Aligned_cols=38 Identities=18% Similarity=0.305 Sum_probs=33.7
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-------CeEEEEecCCCCCc
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-------TVAVITKAEPHESN 125 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-------~V~vlEk~~~~~g~ 125 (647)
.+||+|||||++||+||++|+++| +|+|+|+.+..+|.
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~ 49 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGK 49 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCce
Confidence 479999999999999999999976 79999998766654
No 183
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.19 E-value=1.3e-05 Score=91.23 Aligned_cols=41 Identities=20% Similarity=0.217 Sum_probs=36.1
Q ss_pred cccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCcc
Q 006397 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNT 126 (647)
Q Consensus 86 ~~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s 126 (647)
...+||+|||||+||++||+.|+++| +|+|+|+....+|..
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~ 430 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRV 430 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHH
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEe
Confidence 34689999999999999999999999 999999988666543
No 184
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.18 E-value=3.3e-05 Score=84.27 Aligned_cols=69 Identities=19% Similarity=0.157 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCC---ceEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 213 GREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPD---AVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 213 g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~---~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
..++...|...+.+ .+..+.++++|+++..++++.. ....-|.+.+..+|+..++.|+.||+|||..+.
T Consensus 144 r~E~~~Yl~~~A~~-~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~P~ 215 (501)
T 4b63_A 144 RLEFEDYMRWCAQQ-FSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGTAK 215 (501)
T ss_dssp HHHHHHHHHHHHHT-TGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCEEC
T ss_pred HHHHHHHHHHHHHH-cCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCCCC
Confidence 44666666666665 4778999999999986533210 113346666777888889999999999997654
No 185
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.16 E-value=5.3e-06 Score=90.04 Aligned_cols=37 Identities=16% Similarity=0.304 Sum_probs=33.7
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC---CeEEEEecCCCCC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG---TVAVITKAEPHES 124 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G---~V~vlEk~~~~~g 124 (647)
.+||+|||||++||++|++|+++| +|+|+|+....+|
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG 43 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGG 43 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBT
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCc
Confidence 479999999999999999999988 7999999877666
No 186
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.10 E-value=2.8e-05 Score=83.83 Aligned_cols=50 Identities=26% Similarity=0.321 Sum_probs=39.3
Q ss_pred ceeEeCCCCccc-ccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhhc
Q 006397 437 GGVRAGLQGETN-VRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 437 GGi~vD~~~~T~-ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
|||.+|++++|+ +||+||+|||+ .|..| .+..+...|+.++.+++.++..
T Consensus 346 g~i~vn~~~rt~~~p~vya~Gd~~-~g~~~-------~i~~a~~~g~~aa~~i~~~l~~ 396 (460)
T 1cjc_A 346 LGVVPNMEGRVVDVPGLYCSGWVK-RGPTG-------VITTTMTDSFLTGQILLQDLKA 396 (460)
T ss_dssp TTBCCEETTEETTCTTEEECTHHH-HCTTC-------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeeECCCCcCcCCCCEEEEEeCC-cCCCc-------cHHHHHHHHHHHHHHHHHHHHh
Confidence 678888899998 89999999998 44432 2346788899999998887643
No 187
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.97 E-value=4.7e-06 Score=89.88 Aligned_cols=58 Identities=12% Similarity=0.047 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHcCCCcEEEcceEEEEEEecC-CCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 214 REIERALLEAVVSDPNISVFEHHFAIDLLTTL-DGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 214 ~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~-~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
..+..+|.+.+++. |++|+.+++|++|..+. ++ ++.||.. +|+ ++.||.||+|+|.++
T Consensus 242 ~~l~~al~~~~~~~-G~~i~~~~~V~~i~~~~~~~---~~~~V~~----~g~--~~~ad~VV~a~~~~~ 300 (453)
T 2bcg_G 242 GELPQGFARLSAIY-GGTYMLDTPIDEVLYKKDTG---KFEGVKT----KLG--TFKAPLVIADPTYFP 300 (453)
T ss_dssp THHHHHHHHHHHHT-TCEEECSCCCCEEEEETTTT---EEEEEEE----TTE--EEECSCEEECGGGCG
T ss_pred HHHHHHHHHHHHHc-CCEEECCCEEEEEEEECCCC---eEEEEEE----CCe--EEECCEEEECCCccc
Confidence 36888899888875 99999999999998762 44 6777754 254 589999999999875
No 188
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.92 E-value=6.6e-05 Score=76.50 Aligned_cols=100 Identities=16% Similarity=0.209 Sum_probs=73.9
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHHHH
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
-.|+|||+|..|+-.|..|++.| +|+++++.+.... +
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~----------------------------------~-------- 183 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA----------------------------------E-------- 183 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCC----------------------------------C--------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcccc----------------------------------C--------
Confidence 47999999999999999999999 9999997653210 0
Q ss_pred HhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006397 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
..+...+.+.+++ .||+++.++.|+++..+ ++
T Consensus 184 ----------------------------------------------~~~~~~l~~~l~~-~gv~i~~~~~v~~i~~~-~~ 215 (320)
T 1trb_A 184 ----------------------------------------------KILIKRLMDKVEN-GNIILHTNRTLEEVTGD-QM 215 (320)
T ss_dssp ----------------------------------------------HHHHHHHHHHHHT-SSEEEECSCEEEEEEEC-SS
T ss_pred ----------------------------------------------HHHHHHHHHhccc-CCeEEEcCceeEEEEcC-CC
Confidence 0122234445555 49999999999999876 33
Q ss_pred CCceEEEEEEEecCC-CeEEEEEcCeEEECCCccc
Q 006397 248 PDAVCHGVDTLNVET-QEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~-G~~~~i~A~~VVlAtGg~~ 281 (647)
++.+|.+.+..+ |+...+.+|.||+|+|-.+
T Consensus 216 ---~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 216 ---GVTGVRLRDTQNSDNIESLDVAGLFVAIGHSP 247 (320)
T ss_dssp ---SEEEEEEECCTTCCCCEEEECSEEEECSCEEE
T ss_pred ---ceEEEEEEeccCCCceEEEEcCEEEEEeCCCC
Confidence 577888765333 5445799999999999654
No 189
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.85 E-value=0.00013 Score=79.09 Aligned_cols=102 Identities=18% Similarity=0.196 Sum_probs=71.9
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHHHH
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
-.|+|||||..|+-+|..|++.| +|+|+|+.+..... .+
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------~~-------- 223 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS--------------------------------MD-------- 223 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS--------------------------------SC--------
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc--------------------------------cC--------
Confidence 57999999999999999999999 99999987532110 00
Q ss_pred HhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006397 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
..+...+.+.+++. ||+++.++.|+++..++++
T Consensus 224 ----------------------------------------------~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~ 256 (478)
T 1v59_A 224 ----------------------------------------------GEVAKATQKFLKKQ-GLDFKLSTKVISAKRNDDK 256 (478)
T ss_dssp ----------------------------------------------HHHHHHHHHHHHHT-TCEEECSEEEEEEEEETTT
T ss_pred ----------------------------------------------HHHHHHHHHHHHHC-CCEEEeCCEEEEEEEecCC
Confidence 12333455556664 9999999999999862122
Q ss_pred CCceEEEEEEEecCCCeEEEEEcCeEEECCCcc
Q 006397 248 PDAVCHGVDTLNVETQEVVRFISKVTLLASGGA 280 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 280 (647)
....+.+.+..+|+...+.+|.||+|+|-.
T Consensus 257 ---~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 286 (478)
T 1v59_A 257 ---NVVEIVVEDTKTNKQENLEAEVLLVAVGRR 286 (478)
T ss_dssp ---TEEEEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred ---CeEEEEEEEcCCCCceEEECCEEEECCCCC
Confidence 233455543334555579999999999844
No 190
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.83 E-value=1.1e-05 Score=85.00 Aligned_cols=42 Identities=29% Similarity=0.479 Sum_probs=37.2
Q ss_pred cccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccc
Q 006397 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTN 127 (647)
Q Consensus 86 ~~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~ 127 (647)
...+||+|||||++|+++|+.|+++| +|+|+|+.+..+|...
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 69 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAY 69 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGC
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccc
Confidence 34689999999999999999999999 9999999887766543
No 191
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.82 E-value=0.00015 Score=73.42 Aligned_cols=54 Identities=7% Similarity=0.033 Sum_probs=42.1
Q ss_pred HHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 224 VVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 224 ~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
+.+..||+++.++.++++..+ ++ ++.++.+.+..+|+...+.+|.||+|+|-.+
T Consensus 189 l~~~~gv~v~~~~~v~~i~~~-~~---~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 242 (310)
T 1fl2_A 189 LRSLKNVDIILNAQTTEVKGD-GS---KVVGLEYRDRVSGDIHNIELAGIFVQIGLLP 242 (310)
T ss_dssp HHTCTTEEEESSEEEEEEEES-SS---SEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred HhhCCCeEEecCCceEEEEcC-CC---cEEEEEEEECCCCcEEEEEcCEEEEeeCCcc
Confidence 333249999999999999865 44 6778888765567767899999999998554
No 192
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.80 E-value=1.1e-05 Score=85.43 Aligned_cols=41 Identities=34% Similarity=0.440 Sum_probs=36.8
Q ss_pred ccccEEEECCcHHHHHHHHHHHhc-C-CeEEEEecCCCCCccc
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKH-G-TVAVITKAEPHESNTN 127 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~-G-~V~vlEk~~~~~g~s~ 127 (647)
.++||+|||||++||+||+.|++. | +|+|+|+.+..||.+.
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~ 48 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAY 48 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeee
Confidence 358999999999999999999999 9 9999999987777553
No 193
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.80 E-value=1.3e-05 Score=86.42 Aligned_cols=40 Identities=33% Similarity=0.457 Sum_probs=36.1
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCcc
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNT 126 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s 126 (647)
.++||+|||||++||+||+.|++.| +|+|+|+....+|..
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~ 44 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRT 44 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCce
Confidence 4689999999999999999999999 999999988766654
No 194
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.76 E-value=0.00019 Score=73.46 Aligned_cols=97 Identities=14% Similarity=0.168 Sum_probs=75.1
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHHHH
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
..|+|||+|..|+-+|..|++.| +|+++++......
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~------------------------------------------- 210 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------------------------------------------- 210 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC-------------------------------------------
Confidence 46999999999999999999999 9999998653210
Q ss_pred HhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006397 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
...+.+.+.+..||+++.++.|.++..+ ++
T Consensus 211 -------------------------------------------------~~~~~~~l~~~~gv~i~~~~~v~~i~~~-~~ 240 (338)
T 3itj_A 211 -------------------------------------------------STIMQKRAEKNEKIEILYNTVALEAKGD-GK 240 (338)
T ss_dssp -------------------------------------------------CHHHHHHHHHCTTEEEECSEEEEEEEES-SS
T ss_pred -------------------------------------------------CHHHHHHHHhcCCeEEeecceeEEEEcc-cC
Confidence 0112233333349999999999999876 33
Q ss_pred CCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 248 PDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
++.+|.+.+..+|+...+.+|.||+|+|-.+
T Consensus 241 ---~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 271 (338)
T 3itj_A 241 ---LLNALRIKNTKKNEETDLPVSGLFYAIGHTP 271 (338)
T ss_dssp ---SEEEEEEEETTTTEEEEEECSEEEECSCEEE
T ss_pred ---cEEEEEEEECCCCceEEEEeCEEEEEeCCCC
Confidence 5788888876677777899999999999654
No 195
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.75 E-value=1.7e-05 Score=87.21 Aligned_cols=39 Identities=26% Similarity=0.425 Sum_probs=35.5
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCcc
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNT 126 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s 126 (647)
.+||+|||||++||+||+.|++.| +|+|+|+.+..||.+
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~ 43 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRT 43 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCce
Confidence 579999999999999999999999 999999988776643
No 196
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.75 E-value=1.6e-05 Score=86.53 Aligned_cols=40 Identities=33% Similarity=0.523 Sum_probs=36.4
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCcc
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNT 126 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s 126 (647)
..+||+|||||++||+||+.|++.| +|+|+|+....+|.+
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRV 50 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCce
Confidence 3579999999999999999999999 999999998877754
No 197
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.74 E-value=1.5e-05 Score=83.29 Aligned_cols=38 Identities=34% Similarity=0.518 Sum_probs=34.9
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCcc
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNT 126 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s 126 (647)
+||+|||||++|+++|+.|++.| +|+|+|+....+|.+
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~ 40 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNA 40 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGG
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcce
Confidence 79999999999999999999999 999999988776654
No 198
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.72 E-value=1.9e-05 Score=82.37 Aligned_cols=39 Identities=18% Similarity=0.323 Sum_probs=34.9
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEec-CCCCCc
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKA-EPHESN 125 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~-~~~~g~ 125 (647)
..+||+|||||++||+||+.|++.| +|+|+|+. ...+|.
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr 83 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGR 83 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTT
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCc
Confidence 4589999999999999999999999 99999998 666553
No 199
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.70 E-value=2e-05 Score=85.39 Aligned_cols=40 Identities=18% Similarity=0.395 Sum_probs=35.0
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCcc
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNT 126 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s 126 (647)
..+||+|||||++||+||+.|+++| +|+|+|+....+|..
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~ 55 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAV 55 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee
Confidence 4589999999999999999999999 999999998776643
No 200
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.70 E-value=0.00019 Score=77.41 Aligned_cols=33 Identities=27% Similarity=0.341 Sum_probs=30.4
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
-.|+|||||..|+.+|..|++.| +|+|+|+.+.
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 203 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPE 203 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCc
Confidence 47999999999999999999999 9999998653
No 201
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.69 E-value=0.00019 Score=73.09 Aligned_cols=50 Identities=14% Similarity=0.069 Sum_probs=40.0
Q ss_pred CCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 228 PNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 228 ~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
.||+++.++.|+++..+ ++ ++.++.+.+..+|+...+.+|.||+|+|-.+
T Consensus 203 ~gv~i~~~~~v~~i~~~-~~---~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 252 (319)
T 3cty_A 203 RNIPYIMNAQVTEIVGD-GK---KVTGVKYKDRTTGEEKLIETDGVFIYVGLIP 252 (319)
T ss_dssp TTCCEECSEEEEEEEES-SS---SEEEEEEEETTTCCEEEECCSEEEECCCEEE
T ss_pred CCcEEEcCCeEEEEecC-Cc---eEEEEEEEEcCCCceEEEecCEEEEeeCCcc
Confidence 49999999999999875 34 5778887654467666799999999998554
No 202
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.69 E-value=0.0003 Score=71.86 Aligned_cols=51 Identities=16% Similarity=0.228 Sum_probs=40.0
Q ss_pred cCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 226 SDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 226 ~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
+..||+++.++.++++..+ + ++.+|.+.+..+|+...+.+|.||+|+|-.+
T Consensus 199 ~~~gv~i~~~~~v~~i~~~--~---~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 249 (325)
T 2q7v_A 199 ANPKMKFIWDTAVEEIQGA--D---SVSGVKLRNLKTGEVSELATDGVFIFIGHVP 249 (325)
T ss_dssp TCTTEEEECSEEEEEEEES--S---SEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred hcCCceEecCCceEEEccC--C---cEEEEEEEECCCCcEEEEEcCEEEEccCCCC
Confidence 3359999999999999864 3 5778887654467666899999999998554
No 203
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.69 E-value=0.00025 Score=74.99 Aligned_cols=98 Identities=18% Similarity=0.200 Sum_probs=73.4
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHHHH
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
-.|+|||+|..|+-+|..|++.| +|+++++.+...... .
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~-------------------------------~--------- 182 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARV-------------------------------V--------- 182 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT-------------------------------S---------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhc-------------------------------c---------
Confidence 47999999999999999999999 999999865321000 0
Q ss_pred HhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006397 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
+..+...+.+.+++. ||+++.++.|.++..+ ++
T Consensus 183 ---------------------------------------------~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~-~~ 215 (404)
T 3fg2_P 183 ---------------------------------------------TPEISSYFHDRHSGA-GIRMHYGVRATEIAAE-GD 215 (404)
T ss_dssp ---------------------------------------------CHHHHHHHHHHHHHT-TCEEECSCCEEEEEEE-TT
T ss_pred ---------------------------------------------CHHHHHHHHHHHHhC-CcEEEECCEEEEEEec-CC
Confidence 112334455566664 9999999999999876 45
Q ss_pred CCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 248 PDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
++.+|.+ .+|+ ++.||.||+|+|-.+
T Consensus 216 ---~v~~V~~---~dG~--~i~aD~Vv~a~G~~p 241 (404)
T 3fg2_P 216 ---RVTGVVL---SDGN--TLPCDLVVVGVGVIP 241 (404)
T ss_dssp ---EEEEEEE---TTSC--EEECSEEEECCCEEE
T ss_pred ---cEEEEEe---CCCC--EEEcCEEEECcCCcc
Confidence 6777765 4565 689999999999654
No 204
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.69 E-value=0.00038 Score=70.48 Aligned_cols=50 Identities=10% Similarity=0.037 Sum_probs=39.7
Q ss_pred CCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 228 PNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 228 ~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
.||+++.++.++++..+ ++ ++.++.+.+..+|+...+.+|.||+|+|-.+
T Consensus 192 ~gv~v~~~~~v~~i~~~-~~---~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 241 (311)
T 2q0l_A 192 DKIEFLTPYVVEEIKGD-AS---GVSSLSIKNTATNEKRELVVPGFFIFVGYDV 241 (311)
T ss_dssp TTEEEETTEEEEEEEEE-TT---EEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred CCeEEEeCCEEEEEECC-CC---cEeEEEEEecCCCceEEEecCEEEEEecCcc
Confidence 59999999999999865 34 6767777654467666799999999999655
No 205
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.68 E-value=0.00027 Score=75.02 Aligned_cols=98 Identities=14% Similarity=0.137 Sum_probs=73.3
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHHHH
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
-.|+|||+|..|+-+|..|++.| +|+++++.+...... .
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~-------------------------------~--------- 192 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARV-------------------------------A--------- 192 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT-------------------------------S---------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhh-------------------------------c---------
Confidence 47999999999999999999999 999999865421000 0
Q ss_pred HhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006397 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
+..+...+.+.+++. ||+++.++.|+++..+ ++
T Consensus 193 ---------------------------------------------~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~-~~ 225 (415)
T 3lxd_A 193 ---------------------------------------------GEALSEFYQAEHRAH-GVDLRTGAAMDCIEGD-GT 225 (415)
T ss_dssp ---------------------------------------------CHHHHHHHHHHHHHT-TCEEEETCCEEEEEES-SS
T ss_pred ---------------------------------------------CHHHHHHHHHHHHhC-CCEEEECCEEEEEEec-CC
Confidence 112334455556664 9999999999999875 44
Q ss_pred CCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 248 PDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
++.+|.+ .+|+ .+.||.||+|+|-.+
T Consensus 226 ---~v~~v~l---~dG~--~i~aD~Vv~a~G~~p 251 (415)
T 3lxd_A 226 ---KVTGVRM---QDGS--VIPADIVIVGIGIVP 251 (415)
T ss_dssp ---BEEEEEE---SSSC--EEECSEEEECSCCEE
T ss_pred ---cEEEEEe---CCCC--EEEcCEEEECCCCcc
Confidence 6777765 3465 689999999999654
No 206
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.67 E-value=0.00031 Score=77.07 Aligned_cols=101 Identities=14% Similarity=0.228 Sum_probs=73.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHHHH
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
-.|+|||||..|+-.|..+++.| +|+++++.+..... .
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~--------------------------------~--------- 253 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI--------------------------------K--------- 253 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC--------------------------------C---------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc--------------------------------c---------
Confidence 57999999999999999999999 99999986532100 0
Q ss_pred HhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006397 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
...+...+.+.+++. ||+++.++.|+++..++++
T Consensus 254 ---------------------------------------------~~~~~~~l~~~l~~~-GV~i~~~~~V~~i~~~~~~ 287 (523)
T 1mo9_A 254 ---------------------------------------------DNETRAYVLDRMKEQ-GMEIISGSNVTRIEEDANG 287 (523)
T ss_dssp ---------------------------------------------SHHHHHHHHHHHHHT-TCEEESSCEEEEEEECTTS
T ss_pred ---------------------------------------------cHHHHHHHHHHHHhC-CcEEEECCEEEEEEEcCCC
Confidence 012334455666664 9999999999999875444
Q ss_pred CCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 248 PDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
++.++.+.. .+|+ .++.||.||+|+|-.+
T Consensus 288 ---~v~~~~v~~-~~G~-~~i~aD~Vv~A~G~~p 316 (523)
T 1mo9_A 288 ---RVQAVVAMT-PNGE-MRIETDFVFLGLGEQP 316 (523)
T ss_dssp ---BEEEEEEEE-TTEE-EEEECSCEEECCCCEE
T ss_pred ---ceEEEEEEE-CCCc-EEEEcCEEEECcCCcc
Confidence 565554432 4554 3689999999999554
No 207
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.67 E-value=0.00032 Score=75.43 Aligned_cols=33 Identities=27% Similarity=0.419 Sum_probs=30.4
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
-+|+|||||..|+-+|..|++.| +|+|+|+.+.
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 204 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGE 204 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 57999999999999999999999 9999998653
No 208
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.66 E-value=2.2e-05 Score=84.08 Aligned_cols=34 Identities=29% Similarity=0.454 Sum_probs=31.0
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..+||+|||||++|+++|+.|+++| +|+||||..
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3479999999999999999999999 999999976
No 209
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.66 E-value=0.00055 Score=73.74 Aligned_cols=148 Identities=11% Similarity=0.029 Sum_probs=81.6
Q ss_pred cccEEEECCcHHHHHHHHHHHhc--C-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHH
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKH--G-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVR 164 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~--G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~ 164 (647)
...|+|||||..|+-+|..|++. | +|+++++.+.... ..+++.. . ...++....
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p--------------~~~~~~~--~-------~~~~p~~~~ 283 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKP--------------ADDSPFV--N-------EVFAPKFTD 283 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCB--------------CCCCHHH--H-------GGGSHHHHH
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcC--------------ccCCccc--h-------hccChhHHH
Confidence 35799999999999999999998 7 9999998763210 0111100 0 012233333
Q ss_pred HHHHhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEec
Q 006397 165 VVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTT 244 (647)
Q Consensus 165 ~~~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~ 244 (647)
.+..........+...-... ...+.. .+ .....+...+.+.+....||+++.++.|+++..+
T Consensus 284 ~~~~l~~~~~~~~~~~~~~~-----------~~~~~~-~~------~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~ 345 (463)
T 3s5w_A 284 LIYSREHAERERLLREYHNT-----------NYSVVD-TD------LIERIYGVFYRQKVSGIPRHAFRCMTTVERATAT 345 (463)
T ss_dssp HHHHSCHHHHHHHHHHTGGG-----------TSSCBC-HH------HHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEE
T ss_pred HHhcCCHHHHHHHHHHhhcc-----------CCCcCC-HH------HHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEec
Confidence 33222222111111110000 000000 00 0011122222334444459999999999999875
Q ss_pred CCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 245 LDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 245 ~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
+ + . ..+.+.+..+|+..++.+|.||+|||-..
T Consensus 346 ~-~---~-~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p 377 (463)
T 3s5w_A 346 A-Q---G-IELALRDAGSGELSVETYDAVILATGYER 377 (463)
T ss_dssp T-T---E-EEEEEEETTTCCEEEEEESEEEECCCEEC
T ss_pred C-C---E-EEEEEEEcCCCCeEEEECCEEEEeeCCCC
Confidence 3 3 2 34666665578877899999999999544
No 210
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.65 E-value=2.5e-05 Score=85.63 Aligned_cols=40 Identities=23% Similarity=0.321 Sum_probs=36.1
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC--CeEEEEecCCCCCcc
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPHESNT 126 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~~~~g~s 126 (647)
..+||+|||||++||+||+.|++.| +|+|+|+....||..
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCce
Confidence 4589999999999999999999998 899999998777743
No 211
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.62 E-value=0.00045 Score=70.76 Aligned_cols=99 Identities=13% Similarity=0.159 Sum_probs=72.6
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHHHH
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
-.|+|||+|..|+-.|..|++.| +|+++++.+.... .+
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~----------------------------------~~------- 191 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA----------------------------------HE------- 191 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS----------------------------------CH-------
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc----------------------------------cH-------
Confidence 47999999999999999999999 9999998653210 00
Q ss_pred HhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006397 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
.....|.+.+++ .||+++.++.+.++..+ +
T Consensus 192 -----------------------------------------------~~~~~l~~~l~~-~gv~v~~~~~v~~i~~~--~ 221 (335)
T 2zbw_A 192 -----------------------------------------------ASVKELMKAHEE-GRLEVLTPYELRRVEGD--E 221 (335)
T ss_dssp -----------------------------------------------HHHHHHHHHHHT-TSSEEETTEEEEEEEES--S
T ss_pred -----------------------------------------------HHHHHHHhcccc-CCeEEecCCcceeEccC--C
Confidence 011223344555 49999999999999864 3
Q ss_pred CCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 248 PDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
++.++.+.+..+|+...+.+|.||+|+|-.+
T Consensus 222 ---~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 252 (335)
T 2zbw_A 222 ---RVRWAVVFHNQTQEELALEVDAVLILAGYIT 252 (335)
T ss_dssp ---SEEEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred ---CeeEEEEEECCCCceEEEecCEEEEeecCCC
Confidence 4667777644357556799999999999655
No 212
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.61 E-value=0.00029 Score=73.09 Aligned_cols=52 Identities=29% Similarity=0.358 Sum_probs=40.0
Q ss_pred ceeEeCCCCcccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhhc
Q 006397 437 GGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 437 GGi~vD~~~~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
|+|.||++++|++|||||+|||+ +.++..++ ...|...|+.||.++..++..
T Consensus 278 g~i~vd~~~~t~~~~vya~GD~~--~~~~~~~~----~~~A~~~g~~aa~~i~~~l~~ 329 (360)
T 3ab1_A 278 NALVVDSHMKTSVDGLYAAGDIA--YYPGKLKI----IQTGLSEATMAVRHSLSYIKP 329 (360)
T ss_dssp TEEECCTTSBCSSTTEEECSTTE--ECTTCCCS----HHHHHHHHHHHHHHHHHHHSC
T ss_pred CeeeecCCCcCCCCCEEEecCcc--CCCCccce----eehhHHHHHHHHHHHHhhcCC
Confidence 78899999999999999999997 34443333 344666788899998887743
No 213
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.60 E-value=4.2e-05 Score=81.49 Aligned_cols=40 Identities=20% Similarity=0.402 Sum_probs=35.7
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC--CeEEEEecCCCCCcc
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPHESNT 126 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~~~~g~s 126 (647)
..+||+|||||++||+||+.|+++| +|+|+|+.+..||.+
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~ 46 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKC 46 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcc
Confidence 3579999999999999999999998 899999988777643
No 214
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.59 E-value=3.4e-05 Score=84.10 Aligned_cols=39 Identities=21% Similarity=0.367 Sum_probs=35.4
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCcc
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNT 126 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s 126 (647)
.+||+|||||++||+||+.|++.| +|+|+|+.+..||..
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~ 78 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRS 78 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcc
Confidence 489999999999999999999999 999999998776643
No 215
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.59 E-value=0.00027 Score=75.85 Aligned_cols=34 Identities=38% Similarity=0.426 Sum_probs=31.1
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
..+|+|||||++|+.+|..|++.| +|+|+|+.+.
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 183 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDR 183 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcc
Confidence 468999999999999999999999 9999998753
No 216
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.59 E-value=0.00028 Score=75.93 Aligned_cols=33 Identities=27% Similarity=0.394 Sum_probs=30.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
-.|+|||||.+|+.+|..|++.| +|+|+|+.+.
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~ 201 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDR 201 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCc
Confidence 47999999999999999999999 9999998653
No 217
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.58 E-value=0.00069 Score=73.58 Aligned_cols=98 Identities=14% Similarity=0.079 Sum_probs=71.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHHHH
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
-.|+|||||..|+-.|..+++.| +|+++++...... .+
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~~---------------------------------~d-------- 224 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLRG---------------------------------FD-------- 224 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTT---------------------------------SC--------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccccc---------------------------------CC--------
Confidence 36999999999999999999999 9999997532110 00
Q ss_pred HhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006397 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
..+...+.+.+++. ||+++.++.+.++...+++
T Consensus 225 ----------------------------------------------~~~~~~l~~~l~~~-gv~~~~~~~v~~i~~~~~~ 257 (488)
T 3dgz_A 225 ----------------------------------------------QQMSSLVTEHMESH-GTQFLKGCVPSHIKKLPTN 257 (488)
T ss_dssp ----------------------------------------------HHHHHHHHHHHHHT-TCEEEETEEEEEEEECTTS
T ss_pred ----------------------------------------------HHHHHHHHHHHHHC-CCEEEeCCEEEEEEEcCCC
Confidence 12233444555564 9999999999999874343
Q ss_pred CCceEEEEEEEecCCCeEEEEEcCeEEECCC
Q 006397 248 PDAVCHGVDTLNVETQEVVRFISKVTLLASG 278 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtG 278 (647)
.+ .+.+.+..+|+...+.+|.||+|+|
T Consensus 258 ---~~-~v~~~~~~~g~~~~~~~D~vi~a~G 284 (488)
T 3dgz_A 258 ---QL-QVTWEDHASGKEDTGTFDTVLWAIG 284 (488)
T ss_dssp ---CE-EEEEEETTTTEEEEEEESEEEECSC
T ss_pred ---cE-EEEEEeCCCCeeEEEECCEEEEccc
Confidence 23 3555554457766789999999998
No 218
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.58 E-value=0.00036 Score=75.87 Aligned_cols=99 Identities=21% Similarity=0.218 Sum_probs=71.0
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHHHH
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
-.|+|||||..|+-.|..|++.| +|+|+++.+..... .+
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------~d-------- 238 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG--------------------------------MD-------- 238 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS--------------------------------SC--------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc--------------------------------CC--------
Confidence 47999999999999999999999 99999986532100 00
Q ss_pred HhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006397 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
..+...+.+.+++. ||+++.++.|+++..++ +
T Consensus 239 ----------------------------------------------~~~~~~l~~~l~~~-gV~v~~~~~v~~i~~~~-~ 270 (491)
T 3urh_A 239 ----------------------------------------------GEVAKQLQRMLTKQ-GIDFKLGAKVTGAVKSG-D 270 (491)
T ss_dssp ----------------------------------------------HHHHHHHHHHHHHT-TCEEECSEEEEEEEEET-T
T ss_pred ----------------------------------------------HHHHHHHHHHHHhC-CCEEEECCeEEEEEEeC-C
Confidence 12334455556664 99999999999998763 3
Q ss_pred CCceEEEEEEEecCCCeEEEEEcCeEEECCCc
Q 006397 248 PDAVCHGVDTLNVETQEVVRFISKVTLLASGG 279 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 279 (647)
.+ .+.+.+..+|+...+.+|.||+|+|-
T Consensus 271 ---~~-~v~~~~~~~g~~~~i~~D~Vi~a~G~ 298 (491)
T 3urh_A 271 ---GA-KVTFEPVKGGEATTLDAEVVLIATGR 298 (491)
T ss_dssp ---EE-EEEEEETTSCCCEEEEESEEEECCCC
T ss_pred ---EE-EEEEEecCCCceEEEEcCEEEEeeCC
Confidence 23 35555433464457999999999983
No 219
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.57 E-value=0.00047 Score=74.61 Aligned_cols=33 Identities=24% Similarity=0.291 Sum_probs=30.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
-.|+|||||..|+-+|..|++.| +|+|+|+.+.
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 212 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGH 212 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCc
Confidence 47999999999999999999999 9999998653
No 220
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.56 E-value=0.00059 Score=74.00 Aligned_cols=99 Identities=21% Similarity=0.201 Sum_probs=72.0
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHHHH
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
-.|+|||||..|+-.|..+++.| +|+++++...... .+
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~~---------------------------------~d-------- 226 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLRG---------------------------------FD-------- 226 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSSTT---------------------------------SC--------
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCcc---------------------------------cC--------
Confidence 36999999999999999999999 9999987432110 00
Q ss_pred HhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006397 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
..+...+.+.+++. ||+++.++.|.++..++++
T Consensus 227 ----------------------------------------------~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~ 259 (483)
T 3dgh_A 227 ----------------------------------------------QQMAELVAASMEER-GIPFLRKTVPLSVEKQDDG 259 (483)
T ss_dssp ----------------------------------------------HHHHHHHHHHHHHT-TCCEEETEEEEEEEECTTS
T ss_pred ----------------------------------------------HHHHHHHHHHHHhC-CCEEEeCCEEEEEEEcCCC
Confidence 02233445555664 9999999999999875444
Q ss_pred CCceEEEEEEEecCCCeEEEEEcCeEEECCCc
Q 006397 248 PDAVCHGVDTLNVETQEVVRFISKVTLLASGG 279 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 279 (647)
.+ .+.+.+..+++...+.+|.||+|+|-
T Consensus 260 ---~~-~v~~~~~~~~~~~~~~~D~vi~a~G~ 287 (483)
T 3dgh_A 260 ---KL-LVKYKNVETGEESEDVYDTVLWAIGR 287 (483)
T ss_dssp ---CE-EEEEEETTTCCEEEEEESEEEECSCE
T ss_pred ---cE-EEEEecCCCCceeEEEcCEEEECccc
Confidence 33 36666654566668999999999983
No 221
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.55 E-value=0.00055 Score=71.83 Aligned_cols=97 Identities=13% Similarity=0.119 Sum_probs=69.7
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHHHH
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
-+|+|||+|..|+.+|..|++.| +|+|+|+.+..... ..
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-------------------------------~~--------- 185 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG-------------------------------LL--------- 185 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-------------------------------TS---------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc-------------------------------cc---------
Confidence 57999999999999999999999 99999986532100 00
Q ss_pred HhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006397 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
...+...+.+.+++ .||+++.++.|+++..++ +
T Consensus 186 ---------------------------------------------~~~~~~~l~~~l~~-~gv~i~~~~~v~~i~~~~-~ 218 (384)
T 2v3a_A 186 ---------------------------------------------HPAAAKAVQAGLEG-LGVRFHLGPVLASLKKAG-E 218 (384)
T ss_dssp ---------------------------------------------CHHHHHHHHHHHHT-TTCEEEESCCEEEEEEET-T
T ss_pred ---------------------------------------------CHHHHHHHHHHHHH-cCCEEEeCCEEEEEEecC-C
Confidence 01233455566666 499999999999998653 3
Q ss_pred CCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 248 PDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
.+ .+.+ .+|+ .+.+|.||+|+|..+
T Consensus 219 ---~~-~v~~---~~g~--~i~~d~vv~a~G~~p 243 (384)
T 2v3a_A 219 ---GL-EAHL---SDGE--VIPCDLVVSAVGLRP 243 (384)
T ss_dssp ---EE-EEEE---TTSC--EEEESEEEECSCEEE
T ss_pred ---EE-EEEE---CCCC--EEECCEEEECcCCCc
Confidence 22 3332 3564 689999999999554
No 222
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.55 E-value=4e-05 Score=83.70 Aligned_cols=39 Identities=31% Similarity=0.451 Sum_probs=35.2
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCc
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESN 125 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~ 125 (647)
..+||+|||||++||+||+.|+++| +|+|+|+....+|.
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~ 51 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGK 51 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCc
Confidence 3589999999999999999999999 99999999877664
No 223
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.54 E-value=0.00062 Score=73.69 Aligned_cols=102 Identities=16% Similarity=0.122 Sum_probs=70.4
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHHHH
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
-.|+|||||..|+-.|..|++.| +|+|+++.+..... .+
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------~d-------- 227 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRS--------------------------------FD-------- 227 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT--------------------------------SC--------
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccc--------------------------------cC--------
Confidence 47999999999999999999999 99999986531100 00
Q ss_pred HhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006397 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
..+...+.+.+++. ||+++.++.|+++..++++
T Consensus 228 ----------------------------------------------~~~~~~~~~~l~~~-gv~i~~~~~v~~i~~~~~~ 260 (478)
T 3dk9_A 228 ----------------------------------------------SMISTNCTEELENA-GVEVLKFSQVKEVKKTLSG 260 (478)
T ss_dssp ----------------------------------------------HHHHHHHHHHHHHT-TCEEETTEEEEEEEECSSS
T ss_pred ----------------------------------------------HHHHHHHHHHHHHC-CCEEEeCCEEEEEEEcCCC
Confidence 12233444555564 9999999999999875443
Q ss_pred CCceEEEEEEEecCCCeE--EEEEcCeEEECCCcc
Q 006397 248 PDAVCHGVDTLNVETQEV--VRFISKVTLLASGGA 280 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~G~~--~~i~A~~VVlAtGg~ 280 (647)
....+.+.+..+|+. ..+.+|.||+|+|-.
T Consensus 261 ---~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~ 292 (478)
T 3dk9_A 261 ---LEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRV 292 (478)
T ss_dssp ---EEEEEEECCTTSCCEEEEEEEESEEEECSCEE
T ss_pred ---cEEEEEEccCCCCcccceEEEcCEEEEeeccc
Confidence 233344433222432 578999999999843
No 224
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.53 E-value=0.00047 Score=75.52 Aligned_cols=97 Identities=16% Similarity=0.179 Sum_probs=74.0
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHHHH
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
-.|+|||||..|+-+|..|++.| +|+++++.+.... +
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~----------------------------------~-------- 393 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA----------------------------------D-------- 393 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS----------------------------------C--------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc----------------------------------C--------
Confidence 47999999999999999999999 9999987543110 0
Q ss_pred HhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006397 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
..+.+.+.+..||+++.++.++++..+ ++
T Consensus 394 --------------------------------------------------~~l~~~l~~~~gV~v~~~~~v~~i~~~-~~ 422 (521)
T 1hyu_A 394 --------------------------------------------------QVLQDKVRSLKNVDIILNAQTTEVKGD-GS 422 (521)
T ss_dssp --------------------------------------------------HHHHHHHTTCTTEEEECSEEEEEEEEC-SS
T ss_pred --------------------------------------------------HHHHHHHhcCCCcEEEeCCEEEEEEcC-CC
Confidence 012223333259999999999999865 34
Q ss_pred CCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 248 PDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
++.++.+.+..+|+...+.+|.||+|+|-.+
T Consensus 423 ---~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 453 (521)
T 1hyu_A 423 ---KVVGLEYRDRVSGDIHSVALAGIFVQIGLLP 453 (521)
T ss_dssp ---SEEEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred ---cEEEEEEEeCCCCceEEEEcCEEEECcCCCC
Confidence 6888888775567777899999999999554
No 225
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.52 E-value=0.00039 Score=75.34 Aligned_cols=33 Identities=21% Similarity=0.314 Sum_probs=30.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
-.|+|||||..|+-.|..|++.| +|+|+++.+.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 219 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGET 219 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCc
Confidence 47999999999999999999999 9999998653
No 226
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.52 E-value=8.9e-05 Score=80.52 Aligned_cols=41 Identities=17% Similarity=0.224 Sum_probs=36.4
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC--CeEEEEecCCCCCccc
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPHESNTN 127 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~~~~g~s~ 127 (647)
..+||+|||||++||++|+.|+++| +|+|+|+.+..||...
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~ 50 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSR 50 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGC
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeee
Confidence 4589999999999999999999997 8999999987776554
No 227
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.51 E-value=0.00082 Score=68.73 Aligned_cols=53 Identities=21% Similarity=0.206 Sum_probs=40.0
Q ss_pred CCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 228 PNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 228 ~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
.||+++.++.++++..++++ .++.++.+.+..+|+...+.+|.||+|+|-.+.
T Consensus 208 ~gv~i~~~~~v~~i~~~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 260 (333)
T 1vdc_A 208 PKIDVIWNSSVVEAYGDGER--DVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPA 260 (333)
T ss_dssp TTEEEECSEEEEEEEESSSS--SSEEEEEEEETTTCCEEEEECSEEEECSCEEES
T ss_pred CCeeEecCCceEEEeCCCCc--cceeeEEEEecCCCceEEEecCEEEEEeCCccc
Confidence 59999999999999875331 146667776544566668999999999996653
No 228
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.51 E-value=0.00077 Score=68.36 Aligned_cols=96 Identities=19% Similarity=0.198 Sum_probs=72.9
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHHHH
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
..|+|||+|..|+-+|..|++.| +|+++++.+.... ++
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~----------------------------------~~------- 193 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA----------------------------------QP------- 193 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS----------------------------------CH-------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc----------------------------------CH-------
Confidence 57999999999999999999999 9999998653210 00
Q ss_pred HhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006397 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
.+.+.+.+..||+++.++.++++..+ +
T Consensus 194 ---------------------------------------------------~~~~~~~~~~gv~~~~~~~v~~i~~~--~ 220 (323)
T 3f8d_A 194 ---------------------------------------------------IYVETVKKKPNVEFVLNSVVKEIKGD--K 220 (323)
T ss_dssp ---------------------------------------------------HHHHHHHTCTTEEEECSEEEEEEEES--S
T ss_pred ---------------------------------------------------HHHHHHHhCCCcEEEeCCEEEEEecc--C
Confidence 01122333359999999999999865 3
Q ss_pred CCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 248 PDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
++.++.+.+..+|+...+.+|.||+|+|-.+
T Consensus 221 ---~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p 251 (323)
T 3f8d_A 221 ---VVKQVVVENLKTGEIKELNVNGVFIEIGFDP 251 (323)
T ss_dssp ---SEEEEEEEETTTCCEEEEECSEEEECCCEEC
T ss_pred ---ceeEEEEEECCCCceEEEEcCEEEEEECCCC
Confidence 5677888776668777899999999999554
No 229
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.50 E-value=0.00036 Score=74.93 Aligned_cols=32 Identities=16% Similarity=0.240 Sum_probs=29.8
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
-.|+|||||..|+-+|..|++.| +|+|+|+.+
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 200 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFD 200 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 47999999999999999999999 999999865
No 230
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.50 E-value=5.5e-05 Score=79.57 Aligned_cols=39 Identities=21% Similarity=0.412 Sum_probs=35.3
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCcc
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNT 126 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s 126 (647)
++||+|||||++|+++|+.|++.| +|+|+|+....+|..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~ 42 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNS 42 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCcc
Confidence 379999999999999999999999 999999988776654
No 231
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.50 E-value=4.9e-05 Score=79.86 Aligned_cols=33 Identities=27% Similarity=0.535 Sum_probs=31.1
Q ss_pred cEEEECCcHHHHHHHHHHHhc--C-CeEEEEecCCC
Q 006397 90 DFSVIGSGVAGLCYALEVAKH--G-TVAVITKAEPH 122 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~--G-~V~vlEk~~~~ 122 (647)
||+|||||++|+++|+.|+++ | +|+|+||.+..
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 899999999999999999999 9 99999998754
No 232
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.49 E-value=0.00054 Score=73.13 Aligned_cols=98 Identities=14% Similarity=0.094 Sum_probs=69.8
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHHHH
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
-.|+|||||..|+-+|..|++.| +|+|+++.+...... .
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~-------------------------------~--------- 189 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERV-------------------------------T--------- 189 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT-------------------------------S---------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccch-------------------------------h---------
Confidence 47999999999999999999999 999999865321000 0
Q ss_pred HhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEec-CC
Q 006397 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTT-LD 246 (647)
Q Consensus 168 ~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~-~~ 246 (647)
+..+...+.+.+++. ||+++.++.|+++..+ ++
T Consensus 190 ---------------------------------------------~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~ 223 (431)
T 1q1r_A 190 ---------------------------------------------APPVSAFYEHLHREA-GVDIRTGTQVCGFEMSTDQ 223 (431)
T ss_dssp ---------------------------------------------CHHHHHHHHHHHHHH-TCEEECSCCEEEEEECTTT
T ss_pred ---------------------------------------------hHHHHHHHHHHHHhC-CeEEEeCCEEEEEEeccCC
Confidence 012233444555554 9999999999999861 23
Q ss_pred CCCceEEEEEEEecCCCeEEEEEcCeEEECCCcc
Q 006397 247 GPDAVCHGVDTLNVETQEVVRFISKVTLLASGGA 280 (647)
Q Consensus 247 g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 280 (647)
+ ++.+|.+ .+|+ .+.+|.||+|+|-.
T Consensus 224 ~---~v~~v~~---~~G~--~i~~D~Vv~a~G~~ 249 (431)
T 1q1r_A 224 Q---KVTAVLC---EDGT--RLPADLVIAGIGLI 249 (431)
T ss_dssp C---CEEEEEE---TTSC--EEECSEEEECCCEE
T ss_pred C---cEEEEEe---CCCC--EEEcCEEEECCCCC
Confidence 4 5656654 3464 68999999999843
No 233
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.49 E-value=0.00039 Score=75.14 Aligned_cols=33 Identities=30% Similarity=0.365 Sum_probs=30.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
-.|+|||||..|+-+|..|++.| +|+|+|+.+.
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 211 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASE 211 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 47999999999999999999999 9999998753
No 234
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.48 E-value=0.00069 Score=68.47 Aligned_cols=49 Identities=8% Similarity=-0.017 Sum_probs=40.3
Q ss_pred CCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 228 PNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 228 ~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
.||+++.++.+.++..+ ++ ++.++.+. ..+|+...+.+|.||+|+|-.+
T Consensus 196 ~gv~~~~~~~v~~i~~~-~~---~~~~v~~~-~~~g~~~~~~~D~vv~a~G~~p 244 (315)
T 3r9u_A 196 EKIELITSASVDEVYGD-KM---GVAGVKVK-LKDGSIRDLNVPGIFTFVGLNV 244 (315)
T ss_dssp TTEEEECSCEEEEEEEE-TT---EEEEEEEE-CTTSCEEEECCSCEEECSCEEE
T ss_pred CCeEEEeCcEEEEEEcC-CC---cEEEEEEE-cCCCCeEEeecCeEEEEEcCCC
Confidence 59999999999999876 44 67788776 4567767899999999999655
No 235
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.43 E-value=0.00077 Score=72.64 Aligned_cols=32 Identities=16% Similarity=0.356 Sum_probs=29.9
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
-.|+|||||..|+-.|..|++.| +|+|+++.+
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 204 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLP 204 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCC
Confidence 47999999999999999999999 999999865
No 236
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.43 E-value=8.5e-05 Score=76.63 Aligned_cols=33 Identities=24% Similarity=0.337 Sum_probs=31.3
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
+||+|||||+||+.||+.|+++| +|+|+|+.+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 69999999999999999999999 9999999774
No 237
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.42 E-value=7.2e-05 Score=81.55 Aligned_cols=39 Identities=28% Similarity=0.417 Sum_probs=35.3
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCc
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESN 125 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~ 125 (647)
..+||+|||||++||+||+.|++.| +|+|+|+....+|.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~ 71 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGR 71 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCc
Confidence 3579999999999999999999999 99999998876664
No 238
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.42 E-value=0.00063 Score=73.73 Aligned_cols=32 Identities=31% Similarity=0.510 Sum_probs=30.0
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
.+|+|||||..|+-+|..|++.| +|+|+|+.+
T Consensus 187 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 219 (480)
T 3cgb_A 187 EDVTIIGGGAIGLEMAETFVELGKKVRMIERND 219 (480)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEECCGG
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC
Confidence 57999999999999999999999 999999865
No 239
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.42 E-value=0.00068 Score=72.83 Aligned_cols=96 Identities=16% Similarity=0.136 Sum_probs=69.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHHHH
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
-.|+|||||..|+-.|..|++.| +|+|+|+.+...... .
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~-------------------------------~--------- 189 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKY-------------------------------F--------- 189 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTT-------------------------------S---------
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhh-------------------------------h---------
Confidence 47999999999999999999999 999999865321000 0
Q ss_pred HhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006397 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
...+...+.+.+++. ||+++.++.|+++..+ ++
T Consensus 190 ---------------------------------------------~~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~-~~ 222 (452)
T 2cdu_A 190 ---------------------------------------------DKEFTDILAKDYEAH-GVNLVLGSKVAAFEEV-DD 222 (452)
T ss_dssp ---------------------------------------------CHHHHHHHHHHHHHT-TCEEEESSCEEEEEEE-TT
T ss_pred ---------------------------------------------hhhHHHHHHHHHHHC-CCEEEcCCeeEEEEcC-CC
Confidence 012334455556664 9999999999999864 34
Q ss_pred CCceEEEEEEEecCCCeEEEEEcCeEEECCCcc
Q 006397 248 PDAVCHGVDTLNVETQEVVRFISKVTLLASGGA 280 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 280 (647)
++.++.. +|+ ++.+|.||+|+|-.
T Consensus 223 ---~v~~v~~----~g~--~i~~D~vv~a~G~~ 246 (452)
T 2cdu_A 223 ---EIITKTL----DGK--EIKSDIAILCIGFR 246 (452)
T ss_dssp ---EEEEEET----TSC--EEEESEEEECCCEE
T ss_pred ---eEEEEEe----CCC--EEECCEEEECcCCC
Confidence 5554432 354 68999999999844
No 240
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.41 E-value=0.00082 Score=72.42 Aligned_cols=32 Identities=25% Similarity=0.398 Sum_probs=29.7
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
-.|+|||||..|+-+|..|++.| +|+|+++.+
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~ 199 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALED 199 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 37999999999999999999999 999999865
No 241
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.38 E-value=0.00044 Score=74.46 Aligned_cols=33 Identities=30% Similarity=0.473 Sum_probs=30.4
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
-.|+|||||.+|+.+|..|++.| +|+|+|+.+.
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 205 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARER 205 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCc
Confidence 47999999999999999999999 9999998753
No 242
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.37 E-value=0.0013 Score=70.84 Aligned_cols=33 Identities=36% Similarity=0.407 Sum_probs=30.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
-.|+|||||..|+-.|..|++.| +|+|+++.+.
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 208 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPR 208 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCc
Confidence 47999999999999999999999 9999998653
No 243
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.33 E-value=0.0011 Score=72.12 Aligned_cols=98 Identities=10% Similarity=0.148 Sum_probs=69.6
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHHHH
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
-.|+|||||..|+-.|..|++.| +|+|+|+.+..... .+
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------~d-------- 216 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK--------------------------------FD-------- 216 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT--------------------------------SC--------
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc--------------------------------cc--------
Confidence 47999999999999999999999 99999986532100 00
Q ss_pred HhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006397 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
..+...+.+.+++. ||+++.++.|+++..++++
T Consensus 217 ----------------------------------------------~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~ 249 (500)
T 1onf_A 217 ----------------------------------------------ESVINVLENDMKKN-NINIVTFADVVEIKKVSDK 249 (500)
T ss_dssp ----------------------------------------------HHHHHHHHHHHHHT-TCEEECSCCEEEEEESSTT
T ss_pred ----------------------------------------------hhhHHHHHHHHHhC-CCEEEECCEEEEEEEcCCc
Confidence 12233445556664 9999999999999865333
Q ss_pred CCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 248 PDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
.+ .+.+ .+|+. .+.+|.||+|+|-.+
T Consensus 250 ---~~-~v~~---~~g~~-~~~~D~vi~a~G~~p 275 (500)
T 1onf_A 250 ---NL-SIHL---SDGRI-YEHFDHVIYCVGRSP 275 (500)
T ss_dssp ---CE-EEEE---TTSCE-EEEESEEEECCCBCC
T ss_pred ---eE-EEEE---CCCcE-EEECCEEEECCCCCc
Confidence 22 3332 35653 489999999999554
No 244
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.31 E-value=0.00093 Score=72.56 Aligned_cols=33 Identities=24% Similarity=0.422 Sum_probs=30.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
-.|+|||||..|+-.|..|++.| +|+|+++.+.
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 228 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDT 228 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccc
Confidence 46999999999999999999999 9999998653
No 245
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.30 E-value=0.001 Score=72.16 Aligned_cols=98 Identities=20% Similarity=0.220 Sum_probs=70.7
Q ss_pred ccEEEECCcHHHHHHHHHHHhc---C-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHH
Q 006397 89 FDFSVIGSGVAGLCYALEVAKH---G-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVR 164 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~---G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~ 164 (647)
-.|+|||||..|+-.|..|++. | +|+|+++.+..... .+
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~--------------------------------~d----- 230 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRG--------------------------------FD----- 230 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT--------------------------------SC-----
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccc--------------------------------cC-----
Confidence 4799999999999999999999 9 99999987531100 00
Q ss_pred HHHHhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEec
Q 006397 165 VVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTT 244 (647)
Q Consensus 165 ~~~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~ 244 (647)
..+...+.+.+++. ||+|++++.|+++..+
T Consensus 231 -------------------------------------------------~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~ 260 (490)
T 1fec_A 231 -------------------------------------------------SELRKQLTEQLRAN-GINVRTHENPAKVTKN 260 (490)
T ss_dssp -------------------------------------------------HHHHHHHHHHHHHT-TEEEEETCCEEEEEEC
T ss_pred -------------------------------------------------HHHHHHHHHHHHhC-CCEEEeCCEEEEEEEc
Confidence 12334455556664 9999999999999875
Q ss_pred CCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcccc
Q 006397 245 LDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 245 ~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
+++ . ..|.+ .+|+ .+.+|.||+|+|-.+.
T Consensus 261 ~~~---~-~~v~~---~~G~--~i~~D~vv~a~G~~p~ 289 (490)
T 1fec_A 261 ADG---T-RHVVF---ESGA--EADYDVVMLAIGRVPR 289 (490)
T ss_dssp TTS---C-EEEEE---TTSC--EEEESEEEECSCEEES
T ss_pred CCC---E-EEEEE---CCCc--EEEcCEEEEccCCCcC
Confidence 333 2 23433 3565 6899999999997653
No 246
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.30 E-value=0.0011 Score=72.10 Aligned_cols=45 Identities=24% Similarity=0.303 Sum_probs=35.3
Q ss_pred ceeEeCCCCcccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHH
Q 006397 437 GGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSID 490 (647)
Q Consensus 437 GGi~vD~~~~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~ 490 (647)
|+|.||++++|++|++||+|||+ ++. .....|...|++|+.++..
T Consensus 310 G~i~Vd~~~~t~~~~IyA~GD~~-~~~--------~l~~~A~~~g~~aa~~i~g 354 (495)
T 2wpf_A 310 GGVQVDEFSRTNVPNIYAIGDIT-DRL--------MLTPVAINEGAALVDTVFG 354 (495)
T ss_dssp SSBCCCTTCBCSSTTEEECGGGG-CSC--------CCHHHHHHHHHHHHHHHHS
T ss_pred CCEEECCCCccCCCCEEEEeccC-CCc--------cCHHHHHHHHHHHHHHhcC
Confidence 67889999999999999999997 322 1234577788989888764
No 247
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.29 E-value=0.00069 Score=69.48 Aligned_cols=49 Identities=12% Similarity=0.142 Sum_probs=37.0
Q ss_pred CCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 228 PNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 228 ~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
.||+++.++.|+++..++ ++.++.+.+..+|+...+.+|.||+|+|-.+
T Consensus 204 ~gV~v~~~~~v~~i~~~~-----~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 252 (335)
T 2a87_A 204 DKIRFLTNHTVVAVDGDT-----TVTGLRVRDTNTGAETTLPVTGVFVAIGHEP 252 (335)
T ss_dssp TTEEEECSEEEEEEECSS-----SCCEEEEEEETTSCCEEECCSCEEECSCEEE
T ss_pred CCcEEEeCceeEEEecCC-----cEeEEEEEEcCCCceEEeecCEEEEccCCcc
Confidence 599999999999997642 3446666553456545799999999999655
No 248
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.29 E-value=0.0005 Score=72.86 Aligned_cols=97 Identities=18% Similarity=0.237 Sum_probs=70.1
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHHHH
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
-.|+|||+|..|+-+|..|++.| +|+++++.+.... ..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~------------------------------------~~----- 182 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLV------------------------------------RV----- 182 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSH------------------------------------HH-----
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccch------------------------------------hh-----
Confidence 47999999999999999999999 9999998653210 00
Q ss_pred HhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006397 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
+ ...+...+.+.+++. ||+++.++.|.++..+ +
T Consensus 183 ----------------~----------------------------~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~--~ 215 (410)
T 3ef6_A 183 ----------------L----------------------------GRRIGAWLRGLLTEL-GVQVELGTGVVGFSGE--G 215 (410)
T ss_dssp ----------------H----------------------------CHHHHHHHHHHHHHH-TCEEECSCCEEEEECS--S
T ss_pred ----------------c----------------------------CHHHHHHHHHHHHHC-CCEEEeCCEEEEEecc--C
Confidence 0 012333445555554 9999999999999764 2
Q ss_pred CCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 248 PDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
++.+|.+ .+|+ .+.||.||+|+|-.+
T Consensus 216 ---~~~~v~~---~dg~--~i~aD~Vv~a~G~~p 241 (410)
T 3ef6_A 216 ---QLEQVMA---SDGR--SFVADSALICVGAEP 241 (410)
T ss_dssp ---SCCEEEE---TTSC--EEECSEEEECSCEEE
T ss_pred ---cEEEEEE---CCCC--EEEcCEEEEeeCCee
Confidence 3445554 3565 689999999999665
No 249
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.26 E-value=0.0022 Score=69.23 Aligned_cols=32 Identities=34% Similarity=0.469 Sum_probs=29.8
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
-.|+|||+|..|+-.|..|++.| +|+++++.+
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 213 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMD 213 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Confidence 47999999999999999999999 999999865
No 250
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.26 E-value=0.002 Score=69.95 Aligned_cols=33 Identities=27% Similarity=0.455 Sum_probs=30.5
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
-.|+|||||..|+-+|..|++.| +|+|+++.+.
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 208 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGS 208 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCc
Confidence 47999999999999999999999 9999998764
No 251
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.26 E-value=0.0017 Score=70.60 Aligned_cols=33 Identities=27% Similarity=0.442 Sum_probs=30.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
-.|+|||+|..|+-.|..+++.| +|+++++.+.
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 216 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDH 216 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 47999999999999999999999 9999998653
No 252
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.23 E-value=0.0023 Score=68.70 Aligned_cols=95 Identities=16% Similarity=0.111 Sum_probs=69.0
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHHHH
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVC 167 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (647)
-.|+|||+|..|+-+|..+++.| +|+++++.+...... .
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~-------------------------------~--------- 187 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKY-------------------------------F--------- 187 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT-------------------------------C---------
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccccc-------------------------------C---------
Confidence 47999999999999999999999 999999865321000 0
Q ss_pred HhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCC
Q 006397 168 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 247 (647)
Q Consensus 168 ~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g 247 (647)
...+...+.+.+++ .||+++.++.|+++..+ ++
T Consensus 188 ---------------------------------------------d~~~~~~l~~~l~~-~GV~i~~~~~v~~i~~~-~~ 220 (452)
T 3oc4_A 188 ---------------------------------------------DKEMVAEVQKSLEK-QAVIFHFEETVLGIEET-AN 220 (452)
T ss_dssp ---------------------------------------------CHHHHHHHHHHHHT-TTEEEEETCCEEEEEEC-SS
T ss_pred ---------------------------------------------CHHHHHHHHHHHHH-cCCEEEeCCEEEEEEcc-CC
Confidence 01233455566666 49999999999999865 33
Q ss_pred CCceEEEEEEEecCCCeEEEEEcCeEEECCCcc
Q 006397 248 PDAVCHGVDTLNVETQEVVRFISKVTLLASGGA 280 (647)
Q Consensus 248 ~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 280 (647)
++ .+.. .+| .+.||.||+|+|-.
T Consensus 221 ---~v-~v~~---~~g---~i~aD~Vv~A~G~~ 243 (452)
T 3oc4_A 221 ---GI-VLET---SEQ---EISCDSGIFALNLH 243 (452)
T ss_dssp ---CE-EEEE---SSC---EEEESEEEECSCCB
T ss_pred ---eE-EEEE---CCC---EEEeCEEEECcCCC
Confidence 34 4433 334 68999999999954
No 253
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.21 E-value=0.0035 Score=68.48 Aligned_cols=46 Identities=22% Similarity=0.208 Sum_probs=35.2
Q ss_pred ceeEeCCCCcccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHH
Q 006397 437 GGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSID 490 (647)
Q Consensus 437 GGi~vD~~~~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~ 490 (647)
|+|.||++++|++|||||+|||++ | ...++ ..|...|++||++++.
T Consensus 334 G~I~Vd~~~~Ts~~~IyA~GD~~~-g---~~~~~----~~A~~~g~~aa~~i~g 379 (519)
T 3qfa_A 334 GKIPVTDEEQTNVPYIYAIGDILE-D---KVELT----PVAIQAGRLLAQRLYA 379 (519)
T ss_dssp CCBCCCTTSBCSSTTEEECGGGBS-S---SCCCH----HHHHHHHHHHHHHHHS
T ss_pred CeEeeCCCCccCCCCEEEEEeccC-C---CCccH----HHHHHHHHHHHHHHcC
Confidence 779999999999999999999973 2 22333 3456678888888764
No 254
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.19 E-value=0.0017 Score=70.20 Aligned_cols=95 Identities=17% Similarity=0.250 Sum_probs=68.6
Q ss_pred ccEEEECCcHHHHHHHHHHHhc-C-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHHH
Q 006397 89 FDFSVIGSGVAGLCYALEVAKH-G-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVV 166 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~-G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~ 166 (647)
-.|+|||+|..|+-+|..+++. | +|+++++.+...... .
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~-------------------------------~-------- 200 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGF-------------------------------T-------- 200 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTT-------------------------------S--------
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccc-------------------------------c--------
Confidence 4799999999999999999999 9 999999865311000 0
Q ss_pred HHhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCC
Q 006397 167 CTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLD 246 (647)
Q Consensus 167 ~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~ 246 (647)
...+...+.+.+++ .||+++.++.|+++..+ +
T Consensus 201 ----------------------------------------------~~~~~~~l~~~l~~-~GV~i~~~~~v~~i~~~-~ 232 (472)
T 3iwa_A 201 ----------------------------------------------SKSLSQMLRHDLEK-NDVVVHTGEKVVRLEGE-N 232 (472)
T ss_dssp ----------------------------------------------CHHHHHHHHHHHHH-TTCEEECSCCEEEEEES-S
T ss_pred ----------------------------------------------CHHHHHHHHHHHHh-cCCEEEeCCEEEEEEcc-C
Confidence 01233445556666 49999999999999874 3
Q ss_pred CCCceEEEEEEEecCCCeEEEEEcCeEEECCCc
Q 006397 247 GPDAVCHGVDTLNVETQEVVRFISKVTLLASGG 279 (647)
Q Consensus 247 g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 279 (647)
+ ++. +.+ .+|+ ++.+|.||+|+|-
T Consensus 233 ~---~v~-v~~---~~g~--~i~aD~Vv~a~G~ 256 (472)
T 3iwa_A 233 G---KVA-RVI---TDKR--TLDADLVILAAGV 256 (472)
T ss_dssp S---BEE-EEE---ESSC--EEECSEEEECSCE
T ss_pred C---eEE-EEE---eCCC--EEEcCEEEECCCC
Confidence 4 443 433 2454 6899999999983
No 255
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.19 E-value=0.0018 Score=69.63 Aligned_cols=97 Identities=19% Similarity=0.253 Sum_probs=69.6
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeeeecCCCCCHHHHHHHHHHhcCCCCCHHHHHHH
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVV 166 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~~~~~~g~~~~~~~~~~~~ 166 (647)
...|+|||+|..|+-.|..+++.| +|+++++.+..... .+
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~--------------------------------~~------- 210 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSR--------------------------------FD------- 210 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT--------------------------------SC-------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc--------------------------------cC-------
Confidence 347999999999999999999999 99999986531100 00
Q ss_pred HHhhHHHHHHHHHcCCccccCCCCcccccccCCccccceeecCCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCC
Q 006397 167 CTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLD 246 (647)
Q Consensus 167 ~~~~~~~~~~l~~~G~~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~ 246 (647)
..+...+.+.+++. ||+++.++.|.++..+++
T Consensus 211 -----------------------------------------------~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~ 242 (463)
T 4dna_A 211 -----------------------------------------------QDMRRGLHAAMEEK-GIRILCEDIIQSVSADAD 242 (463)
T ss_dssp -----------------------------------------------HHHHHHHHHHHHHT-TCEEECSCCEEEEEECTT
T ss_pred -----------------------------------------------HHHHHHHHHHHHHC-CCEEECCCEEEEEEEcCC
Confidence 12334455566664 999999999999987644
Q ss_pred CCCceEEEEEEEecCCCeEEEEEcCeEEECCCcc
Q 006397 247 GPDAVCHGVDTLNVETQEVVRFISKVTLLASGGA 280 (647)
Q Consensus 247 g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 280 (647)
+ . ..|.. ..+|+ +.+|.||+|+|-.
T Consensus 243 ~---~-~~v~~--~~~g~---i~aD~Vv~a~G~~ 267 (463)
T 4dna_A 243 G---R-RVATT--MKHGE---IVADQVMLALGRM 267 (463)
T ss_dssp S---C-EEEEE--SSSCE---EEESEEEECSCEE
T ss_pred C---E-EEEEE--cCCCe---EEeCEEEEeeCcc
Confidence 3 2 23331 34564 8999999999944
No 256
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.18 E-value=0.0022 Score=67.75 Aligned_cols=33 Identities=24% Similarity=0.413 Sum_probs=30.4
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
-.|+|||||..|+-+|..|++.| +|+|+++.+.
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 179 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQPR 179 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCc
Confidence 57999999999999999999999 9999998753
No 257
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.17 E-value=0.0013 Score=71.23 Aligned_cols=33 Identities=21% Similarity=0.349 Sum_probs=30.3
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
-.|+|||||..|+-.|..|++.| +|+|+|+.+.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~ 219 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDG 219 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCc
Confidence 47999999999999999999999 9999998653
No 258
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.15 E-value=0.00025 Score=81.01 Aligned_cols=38 Identities=24% Similarity=0.247 Sum_probs=34.4
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g 124 (647)
..+||+|||||+||++||+.|+++| +|+|+|+.+..+|
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG 426 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGG 426 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCC
Confidence 4589999999999999999999999 9999999876554
No 259
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.13 E-value=0.0003 Score=79.68 Aligned_cols=38 Identities=26% Similarity=0.502 Sum_probs=34.3
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g 124 (647)
..+||+|||||+||++||+.|+++| +|+|+|+.+..+|
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg 410 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGG 410 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCC
Confidence 4589999999999999999999999 9999999876544
No 260
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.13 E-value=0.0028 Score=70.05 Aligned_cols=31 Identities=23% Similarity=0.405 Sum_probs=29.4
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
.|+|||||..|+-+|..|++.| +|+++++.+
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 184 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHLGIKTTLLELAD 184 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCcEEEEEcCC
Confidence 7999999999999999999999 999999865
No 261
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.13 E-value=0.0013 Score=68.40 Aligned_cols=33 Identities=30% Similarity=0.406 Sum_probs=30.4
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
-.|+|||||..|+-+|..|++.| +|+|+|+.+.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 177 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAM 177 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCe
Confidence 47999999999999999999999 9999998653
No 262
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.12 E-value=0.002 Score=65.57 Aligned_cols=49 Identities=8% Similarity=0.019 Sum_probs=38.6
Q ss_pred CCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 228 PNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 228 ~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
.||+++.++.+.++..++ .+.++.+.+..+|+..++.+|.||+|+|-.+
T Consensus 202 ~gv~~~~~~~v~~i~~~~-----~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p 250 (332)
T 3lzw_A 202 SKVNVLTPFVPAELIGED-----KIEQLVLEEVKGDRKEILEIDDLIVNYGFVS 250 (332)
T ss_dssp SSCEEETTEEEEEEECSS-----SCCEEEEEETTSCCEEEEECSEEEECCCEEC
T ss_pred CCeEEEeCceeeEEecCC-----ceEEEEEEecCCCceEEEECCEEEEeeccCC
Confidence 499999999999997642 2456777776667677899999999999554
No 263
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.10 E-value=0.0023 Score=68.98 Aligned_cols=32 Identities=34% Similarity=0.463 Sum_probs=29.7
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
-.|+|||||..|+-+|..+++.| +|+++++.+
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 209 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNT 209 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECC
Confidence 47999999999999999999999 999999865
No 264
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.08 E-value=0.00032 Score=79.20 Aligned_cols=39 Identities=28% Similarity=0.395 Sum_probs=35.2
Q ss_pred cccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006397 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 86 ~~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g 124 (647)
...+||+|||+|++|+++|+.|++.| +|+|+|+....+|
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg 144 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 144 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBT
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 44689999999999999999999999 9999999876665
No 265
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.08 E-value=0.00035 Score=75.57 Aligned_cols=38 Identities=16% Similarity=0.330 Sum_probs=33.7
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC--CeEEEEecCCCCCc
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPHESN 125 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~~~~g~ 125 (647)
.+||+|||||++|+++|+.|++.| +|+|+|+....+|.
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~ 43 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGR 43 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCc
Confidence 579999999999999999999999 59999998776654
No 266
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.05 E-value=0.0028 Score=68.68 Aligned_cols=32 Identities=16% Similarity=0.377 Sum_probs=29.7
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
-.|+|||+|..|+-.|..+++.| +|+++++.+
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~ 224 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGD 224 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCeEEEEECCC
Confidence 47999999999999999999999 999999865
No 267
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.03 E-value=0.0053 Score=61.92 Aligned_cols=50 Identities=18% Similarity=0.124 Sum_probs=39.0
Q ss_pred CCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 228 PNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 228 ~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
.++..+..+.+.++...+ . ...++.+.+..+++...+.+|.||+|+|-.+
T Consensus 201 ~~~~~~~~~~~~~i~~~~-~---~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~p 250 (314)
T 4a5l_A 201 PKIEVIWNSELVELEGDG-D---LLNGAKIHNLVSGEYKVVPVAGLFYAIGHSP 250 (314)
T ss_dssp TTEEEECSEEEEEEEESS-S---SEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred cceeeEeeeeeEEEEeee-e---ccceeEEeecccccceeeccccceEeccccc
Confidence 478888888888887653 3 5677887776667777899999999999655
No 268
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.01 E-value=0.00039 Score=74.75 Aligned_cols=51 Identities=20% Similarity=0.215 Sum_probs=39.2
Q ss_pred cceeEeCCCCc-ccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhhc
Q 006397 436 CGGVRAGLQGE-TNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 436 ~GGi~vD~~~~-T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
.|+|.+|++++ |++||+||+|||+ .|..| .+..|...|+.++.++..++..
T Consensus 337 ~g~i~vn~~~rvt~~pgvya~GD~~-~gp~~-------~i~~a~~~g~~~a~~i~~~l~~ 388 (456)
T 1lqt_A 337 QSGTIPNVGGRINGSPNEYVVGWIK-RGPTG-------VIGTNKKDAQDTVDTLIKNLGN 388 (456)
T ss_dssp TTTBCCEETTEETTCSSEEECTHHH-HCSCS-------CTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeeECCCCcCCCCCCEEEEeccC-CCCch-------hHHHHHHHHHHHHHHHHHHHHh
Confidence 47899999999 8999999999997 45433 1235667788888888877643
No 269
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.00 E-value=0.00044 Score=79.68 Aligned_cols=39 Identities=28% Similarity=0.395 Sum_probs=35.2
Q ss_pred cccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCC
Q 006397 86 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHES 124 (647)
Q Consensus 86 ~~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g 124 (647)
...+||+|||+|++||+||+.|+++| +|+|+|+....+|
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG 315 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 315 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCC
Confidence 34579999999999999999999999 9999999887665
No 270
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=96.95 E-value=0.0034 Score=69.78 Aligned_cols=32 Identities=25% Similarity=0.421 Sum_probs=29.6
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
-.|+|||||..|+-+|..|++.| +|+++++.+
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 220 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMAN 220 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 47999999999999999999999 999999865
No 271
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=96.93 E-value=0.0058 Score=66.89 Aligned_cols=32 Identities=19% Similarity=0.131 Sum_probs=29.3
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
-.++|||||..|+-.|..+++.| +|+|+++..
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~ 256 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRSI 256 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESSC
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEecccc
Confidence 47999999999999999999999 999998754
No 272
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.90 E-value=0.0069 Score=67.40 Aligned_cols=30 Identities=30% Similarity=0.318 Sum_probs=28.6
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CeEEEEec
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~ 119 (647)
.|+|||||..|+-+|..|++.| +|+|+++.
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 6999999999999999999999 99999986
No 273
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.78 E-value=0.0079 Score=65.23 Aligned_cols=52 Identities=12% Similarity=0.100 Sum_probs=36.8
Q ss_pred HHHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcc
Q 006397 218 RALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGA 280 (647)
Q Consensus 218 ~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 280 (647)
..+.+.+++ .||+++.++.|+++..+ ++ .+ .|.+ .+|+ ++.||.||+|+|-.
T Consensus 230 ~~~~~~l~~-~GV~v~~~~~V~~i~~~-~~---~~-~v~l---~dG~--~i~aD~Vv~a~G~~ 281 (493)
T 1m6i_A 230 NWTMEKVRR-EGVKVMPNAIVQSVGVS-SG---KL-LIKL---KDGR--KVETDHIVAAVGLE 281 (493)
T ss_dssp HHHHHHHHT-TTCEEECSCCEEEEEEE-TT---EE-EEEE---TTSC--EEEESEEEECCCEE
T ss_pred HHHHHHHHh-cCCEEEeCCEEEEEEec-CC---eE-EEEE---CCCC--EEECCEEEECCCCC
Confidence 344455666 49999999999999765 33 33 3433 4565 68999999999843
No 274
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.75 E-value=0.0037 Score=66.72 Aligned_cols=33 Identities=18% Similarity=0.293 Sum_probs=30.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
-.|+|||||..|+-.|..+++.| +|+|+|+.+.
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 181 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDK 181 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSC
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeecc
Confidence 37999999999999999999999 9999998653
No 275
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.67 E-value=0.0032 Score=67.53 Aligned_cols=33 Identities=18% Similarity=0.285 Sum_probs=29.3
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-C-eEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-T-VAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~-V~vlEk~~ 120 (647)
.-.|+|||||..|+-+|..+.+.| + |+++++..
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 357999999999999999999999 4 99998765
No 276
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.54 E-value=0.01 Score=63.43 Aligned_cols=32 Identities=31% Similarity=0.509 Sum_probs=29.9
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
-.|+|||||..|+-+|..|++.| +|+++++.+
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 181 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGE 181 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC
Confidence 37999999999999999999999 999999865
No 277
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=96.53 E-value=0.0097 Score=63.99 Aligned_cols=32 Identities=28% Similarity=0.373 Sum_probs=29.8
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
-.|+|||||..|+-.|..|++.| +|+++++.+
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 205 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLD 205 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC
Confidence 47999999999999999999999 999999865
No 278
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.51 E-value=0.011 Score=69.93 Aligned_cols=31 Identities=19% Similarity=0.306 Sum_probs=28.7
Q ss_pred cEEEECCcHHHHHHHHHHHhcC--CeEEEEecC
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG--TVAVITKAE 120 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~ 120 (647)
.|+|||||..|+-+|..+++.| +|+|+++.+
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 7999999999999999999999 699999864
No 279
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.51 E-value=0.01 Score=64.39 Aligned_cols=48 Identities=17% Similarity=0.065 Sum_probs=34.7
Q ss_pred ceeEeCCCCcc-cccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHh
Q 006397 437 GGVRAGLQGET-NVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDH 491 (647)
Q Consensus 437 GGi~vD~~~~T-~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~ 491 (647)
|+|.||+++|| +.|++||+|||+..+.. ..+ ..|.-.|+.+|+++.+.
T Consensus 351 g~I~Vd~~lq~~~~~~IfAiGD~a~~~~p---~~a----~~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 351 RGLAVNDFLQVKGSNNIFAIGDNAFAGLP---PTA----QVAHQEAEYLAKNFDKM 399 (502)
T ss_dssp SSEEBCTTSBBTTCSSEEECGGGEESSSC---CCH----HHHHHHHHHHHHHHHHH
T ss_pred CceeECCccccCCCCCEEEEEcccCCCCC---Cch----HHHHHHHHHHHHHHHHH
Confidence 78999999998 79999999999832221 111 23566788888877654
No 280
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.46 E-value=0.0015 Score=70.13 Aligned_cols=36 Identities=31% Similarity=0.308 Sum_probs=32.1
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC---CeEEEEecCCCC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG---TVAVITKAEPHE 123 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G---~V~vlEk~~~~~ 123 (647)
.+||+|||||++|+.+|..|++.| +|+|+|+.+..+
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~g 44 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPF 44 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSC
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCC
Confidence 479999999999999999999976 799999987543
No 281
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.41 E-value=0.01 Score=69.68 Aligned_cols=51 Identities=16% Similarity=0.148 Sum_probs=37.7
Q ss_pred CCcEEEcceEEEEEEecCCCCCceEEEEEEEe--cC--CCeEEEEEcCeEEECCCccc
Q 006397 228 PNISVFEHHFAIDLLTTLDGPDAVCHGVDTLN--VE--TQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 228 ~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~--~~--~G~~~~i~A~~VVlAtGg~~ 281 (647)
.||+|+.++.|+++..++++ ++.+|.+.+ .. +|+..++.+|.||+|+|-.+
T Consensus 329 ~GV~v~~~~~v~~i~~~~~~---~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P 383 (965)
T 2gag_A 329 DGVQVISGSVVVDTEADENG---ELSAIVVAELDEARELGGTQRFEADVLAVAGGFNP 383 (965)
T ss_dssp TTCCEEETEEEEEEEECTTS---CEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEE
T ss_pred CCeEEEeCCEeEEEeccCCC---CEEEEEEEeccccCCCCceEEEEcCEEEECCCcCc
Confidence 49999999999999763133 677787764 11 25446899999999999554
No 282
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.39 E-value=0.029 Score=61.50 Aligned_cols=34 Identities=21% Similarity=0.246 Sum_probs=31.0
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
.-.|+|||+|..|+-+|..|++.+ +|+|+++.+.
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 357999999999999999999999 9999999764
No 283
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.39 E-value=0.0025 Score=70.59 Aligned_cols=40 Identities=25% Similarity=0.298 Sum_probs=36.9
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCcc
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNT 126 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s 126 (647)
.+|||+|||+|..|...|..|++.| +|++|||+...||+.
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~ 47 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNW 47 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCcc
Confidence 3699999999999999999999999 999999999887754
No 284
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.16 E-value=0.054 Score=54.44 Aligned_cols=33 Identities=18% Similarity=0.274 Sum_probs=30.0
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
-.|+|||||..|+-+|..|++.| +|+|+|+.+.
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 37999999999999999999999 9999998653
No 285
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.09 E-value=0.064 Score=58.69 Aligned_cols=34 Identities=21% Similarity=0.238 Sum_probs=31.0
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
.-.|+|||+|..|+-+|..|++.| +|+|+++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 357999999999999999999999 9999999764
No 286
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=95.87 E-value=0.047 Score=56.24 Aligned_cols=32 Identities=31% Similarity=0.480 Sum_probs=28.4
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
-.|+|||+|..|+-+|..|++.| +|+++++.+
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~ 199 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTT 199 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCC
Confidence 37999999999999999999999 999999865
No 287
>2lfc_A Fumarate reductase, flavoprotein subunit; structural genomics, northeast structural genomics consortiu PSI-biology; NMR {Lactobacillus plantarum}
Probab=95.77 E-value=0.00094 Score=60.62 Aligned_cols=52 Identities=21% Similarity=0.233 Sum_probs=38.8
Q ss_pred cceee-ecccCC--CcEEEeCCCCccccccccccccCchhHHHHHHHHHHHhcCCceEEEeCC
Q 006397 337 SFLIT-EAVRGD--GGILYNLGMERFMPLYDERAELAPRDVVARSIDDQLKKRNEKYVLLDIS 396 (647)
Q Consensus 337 ~~l~~-e~~~~~--g~~~vn~~G~rf~~~y~~~~~l~~rd~~~~~i~~~~~~~~~~~v~lD~~ 396 (647)
..+++ +.+++. |+++||.+|+||++ |+.+++.+++++..+. ++..++++|..
T Consensus 7 ~~l~~~e~~rg~~~G~i~VN~~G~RFvn------E~~~~~~~~~ai~~q~--~~~~~~I~D~~ 61 (160)
T 2lfc_A 7 AKLTTYASKQATDMGAIYVNSKGDRIVN------ESNVYTTFRNAILKQA--DKVAYLVMDER 61 (160)
T ss_dssp CSCCHHHHHHHHHHTCEEECSSSCEEES------SCSCHHHHHHHHHHSS--SCCEEEEEEHH
T ss_pred ceeeechhhccccCCEEEECCCCcCccC------CCCcHHHHHHHHHhCC--CCeEEEEECcc
Confidence 45566 888998 99999999999998 5677888888876532 22345667754
No 288
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=95.58 E-value=0.005 Score=69.12 Aligned_cols=35 Identities=14% Similarity=0.422 Sum_probs=30.7
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC---------CeEEEEecC-CC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG---------TVAVITKAE-PH 122 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G---------~V~vlEk~~-~~ 122 (647)
..+|+|||||++||+||+.|++.| +|+|+|+.. ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 468999999999999999998864 699999987 54
No 289
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=95.54 E-value=0.018 Score=65.52 Aligned_cols=32 Identities=13% Similarity=0.199 Sum_probs=29.6
Q ss_pred ccEEEEC--CcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIG--SGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIG--gG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
-.|+||| ||..|+-+|..|++.| +|+|+++.+
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 4799998 9999999999999999 999999865
No 290
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=95.53 E-value=0.074 Score=58.31 Aligned_cols=34 Identities=21% Similarity=0.292 Sum_probs=31.0
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
.-.|+|||+|..|+-+|..|++.+ +|+|+++.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 357999999999999999999999 9999999763
No 291
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=95.52 E-value=0.042 Score=58.79 Aligned_cols=50 Identities=10% Similarity=-0.002 Sum_probs=36.8
Q ss_pred CCcEEEcceEEEEEEecCCCCCceEEEEEEEec-------------CCCeEEEEEcCeEEECCCcccc
Q 006397 228 PNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNV-------------ETQEVVRFISKVTLLASGGAGH 282 (647)
Q Consensus 228 ~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~-------------~~G~~~~i~A~~VVlAtGg~~~ 282 (647)
.||++++++.++++..+ + ++.++.+.+. .+|+..++.++.||+|+|-.+.
T Consensus 265 ~gv~i~~~~~~~~i~~~--~---~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~ 327 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGK--R---KVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGV 327 (456)
T ss_dssp EEEEEECSEEEEEEECS--S---SCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECC
T ss_pred ceEEEEeCCCCeEEecC--C---cEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccccC
Confidence 48999999999999754 3 4556665421 1465568999999999996653
No 292
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=94.91 E-value=0.062 Score=60.52 Aligned_cols=51 Identities=10% Similarity=0.111 Sum_probs=36.6
Q ss_pred HHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 219 ALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 219 ~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
.+.+.+++. ||+++.++.|+++.. + ++.+. .+|+..++.+|.||+|+|-.+
T Consensus 578 ~~~~~l~~~-GV~v~~~~~v~~i~~--~-------~v~~~--~~G~~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 578 IHRTTLLSR-GVKMIPGVSYQKIDD--D-------GLHVV--INGETQVLAVDNVVICAGQEP 628 (671)
T ss_dssp HHHHHHHHT-TCEEECSCEEEEEET--T-------EEEEE--ETTEEEEECCSEEEECCCEEE
T ss_pred HHHHHHHhc-CCEEEeCcEEEEEeC--C-------eEEEe--cCCeEEEEeCCEEEECCCccc
Confidence 344556664 999999999999862 2 23332 357656899999999999655
No 293
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=94.88 E-value=0.045 Score=54.31 Aligned_cols=33 Identities=18% Similarity=0.176 Sum_probs=28.6
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCeEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHGTVAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G~V~vlEk~~ 120 (647)
...|+|||+|..|+-.|..|++.|+|+++++..
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g~v~~v~~~~ 173 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWGETTFFTNGI 173 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTSEEEEECTTT
T ss_pred CCEEEEEecCccHHHHHHHhhhcCcEEEEECCC
Confidence 357999999999999999999988888887643
No 294
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=93.94 E-value=0.48 Score=51.71 Aligned_cols=33 Identities=24% Similarity=0.397 Sum_probs=29.9
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
...|+|||+|..|+-.|..+++.| +|+++++.+
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~ 219 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTP 219 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CCEEEEECCCccHHHHHHHHhhcCceEEEEEcCC
Confidence 357999999999999999999999 999999865
No 295
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.96 E-value=0.1 Score=45.63 Aligned_cols=33 Identities=15% Similarity=0.200 Sum_probs=30.3
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
.-.|+|||.|..|...|..|.+.| +|+++|+.+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 347999999999999999999999 999999865
No 296
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=92.36 E-value=0.33 Score=48.42 Aligned_cols=32 Identities=13% Similarity=0.105 Sum_probs=23.8
Q ss_pred ccEEEECCcH-HHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGV-AGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~-AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..++|||||. +++.+|..+.+.| +|++++++.
T Consensus 147 ~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~ 180 (304)
T 4fk1_A 147 QPLIIISENEDHTLHMTKLVYNWSTDLVIATNGN 180 (304)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSC
T ss_pred CceeeecCCCchhhhHHHHHHhCCceEEEEeccc
Confidence 3577777775 5678888888888 888887643
No 297
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=92.16 E-value=0.12 Score=46.13 Aligned_cols=32 Identities=28% Similarity=0.342 Sum_probs=29.6
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|+|||+|..|...|..|.+.| +|+++++.+
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 47999999999999999999999 999999865
No 298
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=92.08 E-value=0.61 Score=49.27 Aligned_cols=52 Identities=12% Similarity=0.118 Sum_probs=34.2
Q ss_pred HHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEe-cCCCe---EEEEEcCeEEECCCccc
Q 006397 220 LLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLN-VETQE---VVRFISKVTLLASGGAG 281 (647)
Q Consensus 220 L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~-~~~G~---~~~i~A~~VVlAtGg~~ 281 (647)
+.+.+++. ||+++.++.|+++..+ . +.+.+ ..+|+ ..++.+|.||+|+|-.+
T Consensus 214 ~~~~l~~~-gI~~~~~~~v~~v~~~------~---v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~ 269 (437)
T 3sx6_A 214 LTKGLKEE-GIEAYTNCKVTKVEDN------K---MYVTQVDEKGETIKEMVLPVKFGMMIPAFKG 269 (437)
T ss_dssp HHHHHHHT-TCEEECSEEEEEEETT------E---EEEEEECTTSCEEEEEEEECSEEEEECCEEC
T ss_pred HHHHHHHC-CCEEEcCCEEEEEECC------e---EEEEecccCCccccceEEEEeEEEEcCCCcC
Confidence 44455554 9999999999998532 2 22222 12332 45789999999998444
No 299
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=91.65 E-value=0.53 Score=49.62 Aligned_cols=52 Identities=12% Similarity=0.053 Sum_probs=36.1
Q ss_pred HHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 219 ALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 219 ~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
.+.+.+++. ||++++++.|+++..+ ++.+.+. +++..++.+|.||+|+|-.+
T Consensus 205 ~l~~~l~~~-GV~i~~~~~v~~v~~~---------~v~~~~~-~~~g~~i~~D~vv~a~G~~~ 256 (430)
T 3h28_A 205 LVEDLFAER-NIDWIANVAVKAIEPD---------KVIYEDL-NGNTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHHHHHHHT-TCEEECSCEEEEECSS---------EEEEECT-TSCEEEEECSEEEEECEEEC
T ss_pred HHHHHHHHC-CCEEEeCCEEEEEeCC---------eEEEEec-CCCceEEeeeEEEECCCCcc
Confidence 444556664 9999999999998532 2444432 24445799999999998554
No 300
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=91.64 E-value=0.12 Score=53.98 Aligned_cols=33 Identities=21% Similarity=0.261 Sum_probs=30.7
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
-.|+|||||..|+-+|..|++.| +|+|+|+.+.
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~ 180 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEY 180 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCc
Confidence 47999999999999999999999 9999998764
No 301
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.36 E-value=0.16 Score=44.23 Aligned_cols=32 Identities=31% Similarity=0.581 Sum_probs=29.4
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|+|+|+|..|...|..|.+.| +|+++|+.+
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 36999999999999999999999 999999854
No 302
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=90.45 E-value=2.6 Score=45.29 Aligned_cols=31 Identities=19% Similarity=0.363 Sum_probs=27.4
Q ss_pred cEEEECCcHHHHHHHHHHHhc--C-CeEEEEecC
Q 006397 90 DFSVIGSGVAGLCYALEVAKH--G-TVAVITKAE 120 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~--G-~V~vlEk~~ 120 (647)
.|+|||+|.+|.-.+..|+++ + +|.++-+.+
T Consensus 248 rV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 248 NIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCC
Confidence 599999999999999999875 4 899998865
No 303
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=90.40 E-value=0.23 Score=42.90 Aligned_cols=32 Identities=19% Similarity=0.371 Sum_probs=29.0
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|+|||+|..|...|..|.+.| +|+++++.+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 36999999999999999999999 999999743
No 304
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=90.03 E-value=0.88 Score=47.43 Aligned_cols=49 Identities=12% Similarity=0.129 Sum_probs=34.7
Q ss_pred HHHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 218 RALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 218 ~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
..+.+.+++. ||+++.++.|+++..+ +|.+ .+|+ ++.+|.||+|+|-.+
T Consensus 222 ~~~~~~l~~~-gV~~~~~~~v~~i~~~---------~v~~---~~g~--~~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 222 KAVASIYNQL-GIKLVHNFKIKEIREH---------EIVD---EKGN--TIPADITILLPPYTG 270 (409)
T ss_dssp HHHHHHHHHH-TCEEECSCCEEEECSS---------EEEE---TTSC--EEECSEEEEECCEEC
T ss_pred HHHHHHHHHC-CCEEEcCCceEEECCC---------eEEE---CCCC--EEeeeEEEECCCCCc
Confidence 4444555554 9999999999998532 2433 3465 689999999999554
No 305
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=89.89 E-value=0.35 Score=42.85 Aligned_cols=31 Identities=26% Similarity=0.429 Sum_probs=29.0
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEec
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~ 119 (647)
-.|+|+|+|..|...|..|.+.| +|+++|+.
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 36999999999999999999999 99999985
No 306
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=89.59 E-value=0.2 Score=48.17 Aligned_cols=43 Identities=16% Similarity=0.161 Sum_probs=33.8
Q ss_pred CCCCcccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhhc
Q 006397 442 GLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 442 D~~~~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
+....|+.++||+|||+. +| .++..|+..|+.||++++++++.
T Consensus 287 ~~~~~~~~~~v~l~GDa~-~g---------~gv~~A~~sG~~aA~~I~~~L~~ 329 (336)
T 3kkj_A 287 WGALSDADLGIYVCGDWC-LS---------GRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp CSSEEETTTTEEECCGGG-TT---------SSHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccceeeCCCCEEEEeccc-CC---------cCHHHHHHHHHHHHHHHHHHhhc
Confidence 334567899999999985 22 24677999999999999998753
No 307
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=89.23 E-value=0.25 Score=47.22 Aligned_cols=37 Identities=16% Similarity=0.227 Sum_probs=28.1
Q ss_pred cccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhh
Q 006397 446 ETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHK 492 (647)
Q Consensus 446 ~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~ 492 (647)
.|++|||||+|||+ .+| ....++-.|+.+|+++.+.+
T Consensus 195 ~t~~p~iya~G~~a---~~g-------~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 195 LKRLEGLYAVGLCV---REG-------DYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp ETTSBSEEECGGGT---SCC-------CHHHHHHHHHHHHHHHHHHC
T ss_pred ccccccceeeeecc---cCc-------cHHHHHHHHHHHHHHHHhhc
Confidence 37999999999996 233 34456778999999887653
No 308
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=89.03 E-value=0.36 Score=41.81 Aligned_cols=31 Identities=32% Similarity=0.451 Sum_probs=28.6
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
.|+|+|+|..|...|..|.+.| +|+++++..
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5999999999999999999999 999999753
No 309
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=88.23 E-value=0.73 Score=48.96 Aligned_cols=40 Identities=20% Similarity=0.306 Sum_probs=36.9
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCcc
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNT 126 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s 126 (647)
.++||||||||++||+||+.|+++| +|+|+|+....||.+
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 50 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEA 50 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccc
Confidence 4689999999999999999999999 999999999887754
No 310
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=88.05 E-value=0.33 Score=50.21 Aligned_cols=43 Identities=28% Similarity=0.274 Sum_probs=36.4
Q ss_pred CCCcc-cccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhhcc
Q 006397 443 LQGET-NVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKST 495 (647)
Q Consensus 443 ~~~~T-~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~~ 495 (647)
...+| .+||||+||+.+ |+.| ..||+..|.+||.+|+.++++.
T Consensus 321 ~tle~k~~~~Lf~AGqi~--G~~G--------y~eAaa~Gl~AG~naa~~~~g~ 364 (443)
T 3g5s_A 321 ETLEFREAEGLYAAGVLA--GVEG--------YLESAATGFLAGLNAARKALGL 364 (443)
T ss_dssp TTSEETTEEEEEECGGGG--TBCS--------HHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhceecCCCCEEECcccc--ccHH--------HHHHHHhHHHHHHHHHHHhcCC
Confidence 66777 699999999997 7654 5799999999999999987654
No 311
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=88.05 E-value=0.46 Score=39.45 Aligned_cols=32 Identities=22% Similarity=0.359 Sum_probs=28.6
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC--CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG--TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~ 120 (647)
..|+|+|+|..|...+..|.+.| +|+++++.+
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 46999999999999999999999 789998754
No 312
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=87.84 E-value=0.45 Score=43.47 Aligned_cols=32 Identities=22% Similarity=0.176 Sum_probs=29.3
Q ss_pred ccEEEECCcHHHHHHHHHHHhc-C-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKH-G-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~-G-~V~vlEk~~ 120 (647)
-.|+|||.|..|...|..|.+. | +|+++|+.+
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 4699999999999999999999 9 999999854
No 313
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=87.07 E-value=0.46 Score=45.09 Aligned_cols=32 Identities=16% Similarity=0.219 Sum_probs=29.1
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEec
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~ 119 (647)
...|+|||||..|...|..|.+.| +|+|++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 357999999999999999999999 99999863
No 314
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=86.97 E-value=0.62 Score=49.33 Aligned_cols=45 Identities=20% Similarity=0.248 Sum_probs=35.0
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCccccccCCeee
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSA 135 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s~~a~Ggi~~ 135 (647)
.|+|||.|.+|+++|..|+++| +|++.|......+..... -|+..
T Consensus 7 ~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~-~G~~~ 52 (439)
T 2x5o_A 7 NVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-EAVER 52 (439)
T ss_dssp CEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTGGGSC-TTSCE
T ss_pred EEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchhHHhh-CCCEE
Confidence 5899999999999999999999 999999876544333333 34443
No 315
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=86.62 E-value=0.39 Score=47.13 Aligned_cols=32 Identities=19% Similarity=0.347 Sum_probs=29.4
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|+|||||-.|...|..|.+.| +|+|++...
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 46999999999999999999999 999999754
No 316
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=86.32 E-value=0.53 Score=44.45 Aligned_cols=31 Identities=19% Similarity=0.285 Sum_probs=28.9
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
.|+|||+|..|...|..|.+.| +|+++|+.+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4899999999999999999999 999999764
No 317
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=86.11 E-value=0.46 Score=46.05 Aligned_cols=35 Identities=14% Similarity=0.164 Sum_probs=31.4
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC--CeEEEEecCCC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPH 122 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~~~ 122 (647)
...|+|||+|..|..+|..|++.| +++|+|.....
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~ 67 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVS 67 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcc
Confidence 457999999999999999999999 79999988753
No 318
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=85.30 E-value=0.55 Score=50.08 Aligned_cols=32 Identities=13% Similarity=0.037 Sum_probs=29.7
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
-.|+|||+|..|+-.|..|++.| +|+|+++.+
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~ 230 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRT 230 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSS
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECC
Confidence 47999999999999999999999 999999865
No 319
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=85.21 E-value=0.73 Score=46.61 Aligned_cols=38 Identities=16% Similarity=0.267 Sum_probs=33.3
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC--CeEEEEecCCCCC
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPHES 124 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~~~~g 124 (647)
....|+|||+|..|..+|..|+..| +++|+|.+....+
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~S 72 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYS 72 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTT
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEeccc
Confidence 3578999999999999999999999 8999998876443
No 320
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=84.75 E-value=0.57 Score=49.62 Aligned_cols=33 Identities=6% Similarity=-0.086 Sum_probs=29.8
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-C-eEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-T-VAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~-V~vlEk~~ 120 (647)
.-+|+|||+|..|+-.|..|++.| + |+|+++.+
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 357999999999999999999999 8 99999864
No 321
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=84.63 E-value=0.62 Score=46.83 Aligned_cols=32 Identities=28% Similarity=0.429 Sum_probs=29.1
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
-.|.|||+|..|...|..++..| +|+|+|..+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 36999999999999999999999 999999643
No 322
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=84.57 E-value=0.65 Score=48.17 Aligned_cols=33 Identities=27% Similarity=0.327 Sum_probs=30.3
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
...|+|||+|.+|+.+|..|...| +|+++|+.+
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 458999999999999999999999 999999865
No 323
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=84.48 E-value=0.68 Score=45.90 Aligned_cols=38 Identities=16% Similarity=0.297 Sum_probs=32.1
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC--CeEEEEecCCCCC
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPHES 124 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~~~~g 124 (647)
....|+|||+|..|..+|..|+..| +++|+|.+....+
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~s 74 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELA 74 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC---
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChh
Confidence 4578999999999999999999999 8999998876443
No 324
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=82.81 E-value=0.71 Score=47.46 Aligned_cols=33 Identities=24% Similarity=0.198 Sum_probs=30.1
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
...|+|||+|.+|+.+|..|...| +|+++++..
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 457999999999999999999999 999999864
No 325
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=82.74 E-value=0.74 Score=48.89 Aligned_cols=32 Identities=28% Similarity=0.201 Sum_probs=29.6
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|+|||.|.+|+++|..|.++| +|.+.|+..
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 46999999999999999999999 999999854
No 326
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=82.00 E-value=1 Score=46.21 Aligned_cols=32 Identities=22% Similarity=0.237 Sum_probs=29.1
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|+|+|+|.+|+.++..|+..| +|+++++..
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 57999999999999999999999 999998753
No 327
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=81.43 E-value=1 Score=45.38 Aligned_cols=32 Identities=34% Similarity=0.674 Sum_probs=29.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|.|||+|..|...|..|++.| +|+++++..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 36999999999999999999999 999999854
No 328
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=81.21 E-value=0.97 Score=45.33 Aligned_cols=32 Identities=22% Similarity=0.597 Sum_probs=28.9
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|.|||+|..|...|..|++.| +|+++++..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 36999999999999999999999 999999854
No 329
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=81.14 E-value=1 Score=46.28 Aligned_cols=34 Identities=29% Similarity=0.396 Sum_probs=30.7
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC--CeEEEEecC
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAE 120 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~ 120 (647)
.+..|+|+|+|.||+.+|..|...| +|+++|+..
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 4578999999999999999999999 899999864
No 330
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=81.09 E-value=0.92 Score=43.95 Aligned_cols=35 Identities=29% Similarity=0.307 Sum_probs=31.3
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC--CeEEEEecCCC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPH 122 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~~~ 122 (647)
...|+|||+|..|..+|..|+..| +++|+|.....
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~ 64 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVH 64 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcc
Confidence 468999999999999999999999 89999987653
No 331
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=80.91 E-value=1 Score=46.98 Aligned_cols=33 Identities=30% Similarity=0.324 Sum_probs=29.7
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
...|+|||+|.+|+.+|..|...| +|+++++..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 357999999999999999999999 999999764
No 332
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=80.68 E-value=1.1 Score=46.00 Aligned_cols=34 Identities=21% Similarity=0.251 Sum_probs=30.5
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC--CeEEEEecC
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAE 120 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~ 120 (647)
.+..|+|+|+|.+|..+|..|...| +|+++|+..
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~G 226 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKG 226 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 4578999999999999999999999 799999863
No 333
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=80.67 E-value=1.1 Score=44.17 Aligned_cols=31 Identities=32% Similarity=0.513 Sum_probs=28.5
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
.|.|||+|..|...|..+++.| +|+++++..
T Consensus 6 kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 6999999999999999999999 999998753
No 334
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=80.48 E-value=1.2 Score=45.67 Aligned_cols=35 Identities=17% Similarity=0.298 Sum_probs=31.8
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC--CeEEEEecCCC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPH 122 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~~~ 122 (647)
...|+|||+|..|..+|..|+..| +++|+|.+...
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~Ve 154 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIE 154 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBCC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcCc
Confidence 468999999999999999999999 89999987753
No 335
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=80.42 E-value=1.1 Score=44.54 Aligned_cols=31 Identities=35% Similarity=0.546 Sum_probs=28.5
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
.|.|||+|..|...|..|++.| +|+++++..
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 5999999999999999999999 999999753
No 336
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=80.31 E-value=1.4 Score=47.96 Aligned_cols=39 Identities=18% Similarity=0.293 Sum_probs=33.9
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC--CeEEEEecCCCCCc
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPHESN 125 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~~~~g~ 125 (647)
....|+|||+|..|+.+|..|+..| +++|+|.+....++
T Consensus 325 ~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve~SN 365 (615)
T 4gsl_A 325 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSN 365 (615)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTG
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCcccC
Confidence 3578999999999999999999999 89999988765443
No 337
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=80.26 E-value=1.3 Score=43.91 Aligned_cols=32 Identities=22% Similarity=0.419 Sum_probs=29.4
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|.|||+|..|...|..|++.| +|+++++..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 36999999999999999999999 999999863
No 338
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=80.14 E-value=1.3 Score=48.13 Aligned_cols=39 Identities=18% Similarity=0.293 Sum_probs=33.6
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC--CeEEEEecCCCCCc
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPHESN 125 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~~~~g~ 125 (647)
....|+|||+|..|..+|..|+..| +++|+|.+....++
T Consensus 326 ~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve~SN 366 (598)
T 3vh1_A 326 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSN 366 (598)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCCTTS
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCcccccc
Confidence 3578999999999999999999999 89999988764443
No 339
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=79.92 E-value=1.2 Score=43.56 Aligned_cols=31 Identities=19% Similarity=0.292 Sum_probs=28.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEec
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~ 119 (647)
..|+|+|+|.+|..+|..|++.| +|+|+.+.
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 46999999999999999999999 99998864
No 340
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=79.88 E-value=1.3 Score=44.78 Aligned_cols=32 Identities=22% Similarity=0.249 Sum_probs=28.9
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC--CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG--TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~ 120 (647)
..|.|||+|..|...|..|++.| +|+|+|...
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 57999999999999999999988 799999754
No 341
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=79.54 E-value=1.3 Score=45.95 Aligned_cols=33 Identities=27% Similarity=0.260 Sum_probs=29.7
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
...|+|||+|.+|+.+|..|...| +|+++++.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 457999999999999999999999 999999764
No 342
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=79.36 E-value=0.74 Score=40.17 Aligned_cols=31 Identities=16% Similarity=0.140 Sum_probs=28.0
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEec
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~ 119 (647)
..|+|||+|..|...|..|.+.| +|+++++.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 46999999999999999999999 98888874
No 343
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=79.14 E-value=1.4 Score=42.98 Aligned_cols=33 Identities=27% Similarity=0.526 Sum_probs=29.9
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
...++|||+|.+|..+|..|++.| +|+|+.|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 357999999999999999999999 999998864
No 344
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=79.10 E-value=3.8 Score=43.66 Aligned_cols=57 Identities=9% Similarity=0.052 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHcCCC-cEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 214 REIERALLEAVVSDPN-ISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 214 ~~~~~~L~~~~~~~~g-v~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
..+...|.+.+.+. | ++|+.+++|++|..++++ + .+.. .+|+ .+.||.||+|+|...
T Consensus 255 ~~l~~~l~~~l~~~-g~~~i~~~~~V~~i~~~~~~----v---~v~~-~~g~--~~~ad~vI~a~~~~~ 312 (495)
T 2vvm_A 255 SAFARRFWEEAAGT-GRLGYVFGCPVRSVVNERDA----A---RVTA-RDGR--EFVAKRVVCTIPLNV 312 (495)
T ss_dssp HHHHHHHHHHHHTT-TCEEEESSCCEEEEEECSSS----E---EEEE-TTCC--EEEEEEEEECCCGGG
T ss_pred HHHHHHHHHHhhhc-CceEEEeCCEEEEEEEcCCE----E---EEEE-CCCC--EEEcCEEEECCCHHH
Confidence 46788888888875 6 999999999999876432 2 2222 3454 589999999999543
No 345
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=78.67 E-value=1.5 Score=44.76 Aligned_cols=32 Identities=25% Similarity=0.433 Sum_probs=29.3
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEec
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~ 119 (647)
...|.|||+|.-|...|..|++.| +|.++++.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 357999999999999999999999 99999875
No 346
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=78.66 E-value=1.5 Score=45.03 Aligned_cols=32 Identities=19% Similarity=0.285 Sum_probs=29.1
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|+|+|+|..|..+|..|+..| +|+++++..
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 56999999999999999999999 999998753
No 347
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=78.39 E-value=1.6 Score=45.74 Aligned_cols=32 Identities=16% Similarity=0.214 Sum_probs=29.7
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
-.|||||.|-.|...|..|.+.| .|++||+.+
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 36999999999999999999999 999999875
No 348
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=78.35 E-value=1.5 Score=46.41 Aligned_cols=32 Identities=22% Similarity=0.401 Sum_probs=29.4
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|.|||+|.-|...|..+++.| +|+++|+.+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 46999999999999999999999 999999754
No 349
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=78.18 E-value=1.6 Score=44.15 Aligned_cols=31 Identities=19% Similarity=0.453 Sum_probs=28.6
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEec
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~ 119 (647)
..|.|||+|..|...|..|++.| +|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 36999999999999999999999 99999874
No 350
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=77.81 E-value=1.6 Score=42.88 Aligned_cols=31 Identities=23% Similarity=0.418 Sum_probs=28.7
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
.|.|||+|..|...|..|++.| +|+++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 4899999999999999999999 999998865
No 351
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=77.74 E-value=1.4 Score=47.01 Aligned_cols=33 Identities=27% Similarity=0.453 Sum_probs=29.9
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
+..|.|||.|..|+..|..|++.| +|+++++..
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 357999999999999999999999 999998753
No 352
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=77.25 E-value=1.7 Score=40.60 Aligned_cols=32 Identities=16% Similarity=0.343 Sum_probs=29.3
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|.|||+|..|...|..|++.| +|+++++..
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~ 52 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKD 52 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 46999999999999999999999 999998764
No 353
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=77.15 E-value=2 Score=45.10 Aligned_cols=35 Identities=26% Similarity=0.258 Sum_probs=31.8
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC--CeEEEEecCCC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPH 122 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~~~ 122 (647)
...|+|||+|..|..+|..|+..| +++|+|.....
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~Ve 76 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTID 76 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCEec
Confidence 468999999999999999999999 99999987654
No 354
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=77.11 E-value=1.6 Score=43.89 Aligned_cols=32 Identities=28% Similarity=0.429 Sum_probs=29.0
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|.|||+|.-|...|..+++.| +|+++++.+
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 36999999999999999999999 999998753
No 355
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=77.07 E-value=1.9 Score=44.11 Aligned_cols=32 Identities=22% Similarity=0.364 Sum_probs=29.1
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
.|+|||||..|..+|+.|.+.| +|+++|..+.
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 4899999999999999999999 9999997654
No 356
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=76.77 E-value=1.4 Score=44.35 Aligned_cols=32 Identities=28% Similarity=0.391 Sum_probs=29.1
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHGTVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G~V~vlEk~~ 120 (647)
-.|+|||+|..|+-+|..|++.|+|+++.+..
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVAETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSEEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhhCCEEEEECCC
Confidence 57999999999999999999999999998764
No 357
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=76.69 E-value=1.9 Score=44.49 Aligned_cols=33 Identities=36% Similarity=0.347 Sum_probs=29.4
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
...|+|||+|..|..+|..|...| +|+++++..
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 357999999999999999999999 999998743
No 358
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=76.59 E-value=1.2 Score=47.50 Aligned_cols=32 Identities=16% Similarity=0.375 Sum_probs=29.7
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|+|+|+|-.|...|..|.+.| +|+|+|+.+
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 36999999999999999999999 999999875
No 359
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=76.47 E-value=1.8 Score=43.65 Aligned_cols=31 Identities=19% Similarity=0.163 Sum_probs=28.2
Q ss_pred cEEEECCcHHHHH-HHHHHHhcC-CeEEEEecC
Q 006397 90 DFSVIGSGVAGLC-YALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVvIIGgG~AGl~-aA~~la~~G-~V~vlEk~~ 120 (647)
.|.|||.|.+|++ +|..|.++| +|.+.|+..
T Consensus 6 ~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 6 HIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp EEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 6899999999996 788999999 999999865
No 360
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=76.45 E-value=4.6 Score=44.59 Aligned_cols=56 Identities=16% Similarity=0.141 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHcCCCcEEEcceEEEEEEecCC-CCCceEEEEEEEecCCCeEEEEEcCeEEECCC
Q 006397 214 REIERALLEAVVSDPNISVFEHHFAIDLLTTLD-GPDAVCHGVDTLNVETQEVVRFISKVTLLASG 278 (647)
Q Consensus 214 ~~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~-g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtG 278 (647)
..+..+|.+.+... |.+|+.++.|.+|+.+++ | +++||.. .+|+ +|.|+.||....
T Consensus 378 g~L~qaL~r~~~~~-Gg~i~l~~~V~~I~~~~~~g---~v~gV~~---~~Ge--~i~A~~VVs~~~ 434 (650)
T 1vg0_A 378 GELPQCFCRMCAVF-GGIYCLRHSVQCLVVDKESR---KCKAVID---QFGQ--RIISKHFIIEDS 434 (650)
T ss_dssp THHHHHHHHHHHHT-TCEEESSCCEEEEEEETTTC---CEEEEEE---TTSC--EEECSEEEEEGG
T ss_pred hHHHHHHHHHHHHc-CCEEEeCCEeeEEEEeCCCC---eEEEEEe---CCCC--EEEcCEEEEChh
Confidence 36888898888885 999999999999998743 6 7888862 4565 689999987443
No 361
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=76.36 E-value=1.9 Score=43.86 Aligned_cols=37 Identities=11% Similarity=0.090 Sum_probs=32.6
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC--CeEEEEecCCCCC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPHES 124 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~~~~g 124 (647)
...|+|||.|..|..+|..|+..| +++|+|.......
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V~~s 74 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPE 74 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCcchh
Confidence 568999999999999999999999 8999998775443
No 362
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=76.14 E-value=1.8 Score=45.57 Aligned_cols=33 Identities=27% Similarity=0.304 Sum_probs=29.9
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
...+.|||.|-.||..|..+++.| +|+.+|...
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 468999999999999999999999 999998653
No 363
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=76.04 E-value=1.5 Score=42.88 Aligned_cols=32 Identities=13% Similarity=0.169 Sum_probs=28.9
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|+|+|+|.+|..+|..|++.| +|+|+.|..
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 46999999999999999999999 999998753
No 364
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=75.30 E-value=2.1 Score=45.40 Aligned_cols=31 Identities=19% Similarity=0.173 Sum_probs=28.8
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEec
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~ 119 (647)
..|+|||||..|...|..|.+.| +|+|++..
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 46999999999999999999999 99999974
No 365
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=75.16 E-value=1.7 Score=46.14 Aligned_cols=31 Identities=26% Similarity=0.176 Sum_probs=28.3
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEec
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~ 119 (647)
.-|+|+|+|..|..+|..|+..| +|++.|+.
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~ 297 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEID 297 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 46899999999999999999999 99998864
No 366
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=75.11 E-value=2 Score=42.72 Aligned_cols=30 Identities=20% Similarity=0.419 Sum_probs=28.0
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CeEEEEec
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~ 119 (647)
.|.|||+|..|...|..|++.| +|+++++.
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 6999999999999999999999 99999874
No 367
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=74.75 E-value=2.4 Score=42.39 Aligned_cols=31 Identities=16% Similarity=0.411 Sum_probs=28.1
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC--CeEEEEec
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG--TVAVITKA 119 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~ 119 (647)
..++|+|+|.+|..+|..|++.| +|+|+.|.
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 46999999999999999999999 68898875
No 368
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=74.43 E-value=2.2 Score=42.07 Aligned_cols=31 Identities=23% Similarity=0.321 Sum_probs=27.6
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC--CeEEEEec
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG--TVAVITKA 119 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~ 119 (647)
..|+|+|+|.+|..+|..|++.| +|+|+.|.
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 46999999999999999999999 48888764
No 369
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=73.61 E-value=2.2 Score=45.17 Aligned_cols=31 Identities=35% Similarity=0.500 Sum_probs=28.8
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
.|.|||.|..|+..|..|++.| +|+++++.+
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 6899999999999999999999 999999753
No 370
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=73.49 E-value=3.2 Score=40.16 Aligned_cols=31 Identities=19% Similarity=0.321 Sum_probs=28.4
Q ss_pred cEEEECCcHHHHHHHHHHHhcC--CeEEEEecC
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG--TVAVITKAE 120 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~ 120 (647)
.++|||+|.+|.+++..|.+.| +|.|+.|..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 7999999999999999999999 799998853
No 371
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=73.35 E-value=2.4 Score=41.68 Aligned_cols=33 Identities=24% Similarity=0.159 Sum_probs=29.3
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC--CeEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~ 120 (647)
...++|||+|.+|..+|..|++.| +|+|+.|..
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 357999999999999999999999 799998764
No 372
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=72.94 E-value=0.83 Score=45.08 Aligned_cols=48 Identities=19% Similarity=0.269 Sum_probs=38.0
Q ss_pred CcccccCcccccccccCCCCCCCccCchhhHHHHHHHHHHHHHHHHhhhc
Q 006397 445 GETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKS 494 (647)
Q Consensus 445 ~~T~ipGLyAaGe~a~gG~~Ga~rl~g~sl~~a~v~G~~Ag~~a~~~~~~ 494 (647)
.+|++|++|++|+++ .-++|..|++. .+..++..|+.||..+.++++.
T Consensus 229 ~~~~~p~i~a~G~~~-~~~~g~~~~gp-~~~~~~~sG~~~a~~i~~~l~~ 276 (284)
T 1rp0_A 229 TREVVPGMIVTGMEV-AEIDGAPRMGP-TFGAMMISGQKAGQLALKALGL 276 (284)
T ss_dssp CEEEETTEEECTHHH-HHHHTCEECCS-CCHHHHHHHHHHHHHHHHHTTC
T ss_pred cccccCCEEEEeeeh-hhhcCCCCcCh-HHHHHHHhHHHHHHHHHHHhhh
Confidence 357889999999987 45677666665 4677888999999999887743
No 373
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=72.93 E-value=2.9 Score=41.80 Aligned_cols=31 Identities=16% Similarity=0.334 Sum_probs=28.1
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC--CeEEEEec
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG--TVAVITKA 119 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~ 119 (647)
..++|+|+|.+|..+|..|++.| +|+|+.|.
T Consensus 149 k~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 46999999999999999999999 68898875
No 374
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=72.91 E-value=2.3 Score=42.41 Aligned_cols=31 Identities=29% Similarity=0.493 Sum_probs=27.9
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|+|||+|..|...|..|+ .| +|+++.+..
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 36999999999999999999 89 999999753
No 375
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=72.77 E-value=2.4 Score=43.15 Aligned_cols=32 Identities=25% Similarity=0.378 Sum_probs=28.9
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|.|||+|..|...|..|++.| +|+++++.+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 46999999999999999999999 999998753
No 376
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=72.77 E-value=2.6 Score=42.12 Aligned_cols=31 Identities=26% Similarity=0.488 Sum_probs=27.6
Q ss_pred cEEEECCcHHHHHHHHHHHhc--C-CeEEEEecC
Q 006397 90 DFSVIGSGVAGLCYALEVAKH--G-TVAVITKAE 120 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~--G-~V~vlEk~~ 120 (647)
.|.|||+|..|...|..|++. | +|+++|+..
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 489999999999999999985 6 899999864
No 377
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=72.65 E-value=2.2 Score=45.28 Aligned_cols=31 Identities=26% Similarity=0.452 Sum_probs=28.5
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
.|.|||+|..|...|..+++.| +|+++|+..
T Consensus 39 kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 5999999999999999999999 999998753
No 378
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=72.64 E-value=2.4 Score=42.10 Aligned_cols=31 Identities=13% Similarity=0.194 Sum_probs=27.6
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC--CeEEEEec
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG--TVAVITKA 119 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~ 119 (647)
..|+|||+|.+|..+|..|++.| +|+|+.+.
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 46999999999999999999999 68888774
No 379
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=72.53 E-value=2.6 Score=42.13 Aligned_cols=32 Identities=22% Similarity=0.512 Sum_probs=29.5
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|.|||.|..|...|..|++.| +|+++++.+
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 47999999999999999999999 999998864
No 380
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=72.14 E-value=2.6 Score=44.51 Aligned_cols=34 Identities=24% Similarity=0.403 Sum_probs=30.9
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
+..+.|||.|..|+..|..|++.| +|+++++.+.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 467899999999999999999999 9999998763
No 381
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=72.10 E-value=2.8 Score=42.06 Aligned_cols=30 Identities=27% Similarity=0.555 Sum_probs=27.4
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEec
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~ 119 (647)
..|.|||+|..|...|..|++.| +|+++ +.
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 46999999999999999999999 99998 54
No 382
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=72.06 E-value=2 Score=45.98 Aligned_cols=38 Identities=24% Similarity=0.444 Sum_probs=30.0
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCCCCCcc
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNT 126 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~~~g~s 126 (647)
.+|||||||++||+||+.|+++| +|+|+|+.+..||.+
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~ 40 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRA 40 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcE
Confidence 47999999999999999999999 999999998877743
No 383
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=71.75 E-value=3.9 Score=38.31 Aligned_cols=32 Identities=22% Similarity=0.276 Sum_probs=28.8
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|.|||+|..|...|..|++.| +|+++++..
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46999999999999999999999 999998753
No 384
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=71.71 E-value=2.8 Score=42.28 Aligned_cols=32 Identities=28% Similarity=0.370 Sum_probs=28.7
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC--CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG--TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~ 120 (647)
..|.|||+|..|...|..|+..| +|+++|...
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 47999999999999999999998 799999754
No 385
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=71.58 E-value=2.9 Score=40.95 Aligned_cols=32 Identities=16% Similarity=0.178 Sum_probs=28.0
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC--CeEEEEec
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG--TVAVITKA 119 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~ 119 (647)
...++|+|+|.+|..+|..|++.| +|+|+.|.
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 356999999999999999999999 68888764
No 386
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=71.30 E-value=3.2 Score=40.83 Aligned_cols=31 Identities=23% Similarity=0.282 Sum_probs=28.0
Q ss_pred ccEEEEC-CcHHHHHHHHHHHhcC-CeEEEEec
Q 006397 89 FDFSVIG-SGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVvIIG-gG~AGl~aA~~la~~G-~V~vlEk~ 119 (647)
..++|+| +|.+|..+|..|++.| +|+++.+.
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 4689999 8999999999999999 99998874
No 387
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=70.61 E-value=2.8 Score=41.22 Aligned_cols=32 Identities=22% Similarity=0.138 Sum_probs=28.3
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC--CeEEEEec
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG--TVAVITKA 119 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~ 119 (647)
...++|+|+|.+|-.+|..|++.| +|+|+.|.
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt 155 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRN 155 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESC
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 357999999999999999999999 68888874
No 388
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=70.49 E-value=3.1 Score=41.80 Aligned_cols=32 Identities=19% Similarity=0.322 Sum_probs=28.4
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC--CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG--TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~ 120 (647)
..|.|||+|..|...|..|+..| +|+|+|...
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 36999999999999999999998 788998753
No 389
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=70.44 E-value=3.4 Score=40.63 Aligned_cols=31 Identities=16% Similarity=0.220 Sum_probs=27.8
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC--CeEEEEec
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG--TVAVITKA 119 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~ 119 (647)
..++|+|+|.+|..+|..|++.| +|+|+.|.
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred CEEEEECchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 46999999999999999999999 68888874
No 390
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=70.31 E-value=3.2 Score=40.54 Aligned_cols=31 Identities=26% Similarity=0.365 Sum_probs=27.5
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC--CeEEEEec
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG--TVAVITKA 119 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~ 119 (647)
..++|+|+|.|+-++++.|++.| +|.|+.|.
T Consensus 126 ~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt 158 (269)
T 3tum_A 126 KRALVIGCGGVGSAIAYALAEAGIASITLCDPS 158 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred CeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCC
Confidence 46999999999999999999999 68888763
No 391
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=70.29 E-value=2.9 Score=41.87 Aligned_cols=32 Identities=38% Similarity=0.391 Sum_probs=28.5
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC--CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG--TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~ 120 (647)
..|.|||+|..|...|..|++.| +|+++|...
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 36999999999999999999988 799998754
No 392
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=70.23 E-value=3 Score=41.68 Aligned_cols=31 Identities=29% Similarity=0.489 Sum_probs=27.6
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC---CeEEEEec
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG---TVAVITKA 119 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G---~V~vlEk~ 119 (647)
..|+|||+|..|...|..|++.| +|+++++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 46999999999999999999988 58888874
No 393
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=70.21 E-value=3.1 Score=45.70 Aligned_cols=36 Identities=17% Similarity=0.120 Sum_probs=32.2
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC--CeEEEEecCCCC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPHE 123 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~~~~ 123 (647)
...|+|||+|..|+.+|..|+..| +++|+|......
T Consensus 17 ~s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~Ve~ 54 (640)
T 1y8q_B 17 GGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDV 54 (640)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCBCCG
T ss_pred cCeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCEECh
Confidence 468999999999999999999999 899999877643
No 394
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=70.05 E-value=3.1 Score=41.42 Aligned_cols=30 Identities=20% Similarity=0.498 Sum_probs=26.9
Q ss_pred cEEEECCcHHHHHHHHHHHhcC---CeEEEEec
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG---TVAVITKA 119 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G---~V~vlEk~ 119 (647)
.|.|||+|..|.+.|..|+..| .|+++|..
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4899999999999999999988 58899864
No 395
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=69.65 E-value=3 Score=40.81 Aligned_cols=31 Identities=16% Similarity=0.213 Sum_probs=28.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC--CeEEEEec
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG--TVAVITKA 119 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~ 119 (647)
..|+|||+|.+|-.++..|++.| +|.|+.|.
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 46999999999999999999999 79999875
No 396
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=69.62 E-value=3.4 Score=41.44 Aligned_cols=32 Identities=22% Similarity=0.360 Sum_probs=28.3
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC---CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG---TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G---~V~vlEk~~ 120 (647)
..|.|||+|..|.+.|+.|+..| .|+++|...
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 58999999999999999999988 699999753
No 397
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=69.60 E-value=3.7 Score=38.12 Aligned_cols=30 Identities=27% Similarity=0.453 Sum_probs=27.4
Q ss_pred cEEEEC-CcHHHHHHHHHHHhcC-CeEEEEec
Q 006397 90 DFSVIG-SGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVvIIG-gG~AGl~aA~~la~~G-~V~vlEk~ 119 (647)
.|+||| +|..|...|..|++.| +|.++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 489999 9999999999999999 99999874
No 398
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=69.51 E-value=2.8 Score=41.55 Aligned_cols=32 Identities=28% Similarity=0.391 Sum_probs=28.8
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
+..|.|||.|..|...|..++ .| +|+++|+.+
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 457999999999999999999 99 999999753
No 399
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=69.35 E-value=3.7 Score=41.12 Aligned_cols=32 Identities=28% Similarity=0.385 Sum_probs=28.5
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC--CeEEEEec
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG--TVAVITKA 119 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~ 119 (647)
...|.|||+|..|...|+.|+..| .|+++|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 347999999999999999999988 68899875
No 400
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=69.29 E-value=2.5 Score=44.52 Aligned_cols=31 Identities=23% Similarity=0.309 Sum_probs=28.2
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
.|.|||.|..|+..|..|++.| +|+++++.+
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4899999999999999999999 999998753
No 401
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=69.23 E-value=3.8 Score=40.48 Aligned_cols=32 Identities=28% Similarity=0.360 Sum_probs=29.1
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEec
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~ 119 (647)
...|.|||.|..|..+|..|...| +|+++++.
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~ 187 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARE 187 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECC
Confidence 346999999999999999999999 99999974
No 402
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=68.94 E-value=3.9 Score=40.57 Aligned_cols=32 Identities=28% Similarity=0.346 Sum_probs=29.0
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEec
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~ 119 (647)
...|.|||.|..|..+|..|...| +|+++++.
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~ 189 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARS 189 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECC
Confidence 356999999999999999999999 99999974
No 403
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=68.79 E-value=2.9 Score=41.96 Aligned_cols=29 Identities=21% Similarity=0.446 Sum_probs=27.3
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CeEEEEe
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITK 118 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G-~V~vlEk 118 (647)
.|.|||+|..|...|..|++.| +|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 4899999999999999999999 9999987
No 404
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=68.76 E-value=4.5 Score=40.33 Aligned_cols=32 Identities=25% Similarity=0.370 Sum_probs=29.0
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|.|||+|..|...|..|++.| +|+++++..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 46999999999999999999999 999998754
No 405
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=68.66 E-value=4.1 Score=38.99 Aligned_cols=33 Identities=27% Similarity=0.397 Sum_probs=29.8
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
...|.|||.|..|...|..|++.| +|++.++.+
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 357999999999999999999999 999999754
No 406
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=68.32 E-value=3.7 Score=43.77 Aligned_cols=31 Identities=35% Similarity=0.444 Sum_probs=28.7
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
.|.|||+|.-|...|..+++.| +|+++|+..
T Consensus 7 kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 6999999999999999999999 999999754
No 407
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=68.17 E-value=3.8 Score=40.92 Aligned_cols=31 Identities=26% Similarity=0.395 Sum_probs=27.8
Q ss_pred cEEEECCcHHHHHHHHHHHhcC--CeEEEEecC
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG--TVAVITKAE 120 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~ 120 (647)
.|.|||+|..|...|..++..| +|+++|...
T Consensus 4 kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 4 KISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 6999999999999999999988 788888653
No 408
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=67.88 E-value=3.1 Score=39.15 Aligned_cols=31 Identities=16% Similarity=0.352 Sum_probs=27.6
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEE-EEec
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAV-ITKA 119 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~v-lEk~ 119 (647)
..|.|||+|..|...|..|++.| +|++ .++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~ 56 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRG 56 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence 57999999999999999999999 9888 6654
No 409
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=67.87 E-value=3.6 Score=40.40 Aligned_cols=31 Identities=29% Similarity=0.571 Sum_probs=28.7
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
.|.|||.|..|...|..|++.| +|++.++.+
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 5899999999999999999999 999998864
No 410
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=67.77 E-value=3.6 Score=41.52 Aligned_cols=32 Identities=25% Similarity=0.450 Sum_probs=29.1
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEec
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~ 119 (647)
+..|.|||+|..|...|..|++.| +|.++++.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 457999999999999999999999 99999874
No 411
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=67.73 E-value=3.4 Score=40.46 Aligned_cols=31 Identities=23% Similarity=0.320 Sum_probs=28.3
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEec
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~ 119 (647)
..|+|||+|.+|...|..|.+.| +|+++++.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 46999999999999999999999 99998874
No 412
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=67.47 E-value=3.6 Score=44.49 Aligned_cols=31 Identities=29% Similarity=0.442 Sum_probs=26.9
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEec
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~ 119 (647)
..++|+|+|.+|..+|..|++.| +|+++.|.
T Consensus 365 k~vlV~GaGGig~aia~~L~~~G~~V~i~~R~ 396 (523)
T 2o7s_A 365 KTVVVIGAGGAGKALAYGAKEKGAKVVIANRT 396 (523)
T ss_dssp -CEEEECCSHHHHHHHHHHHHHCC-CEEEESS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 36999999999999999999999 99999874
No 413
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=67.40 E-value=4.8 Score=37.27 Aligned_cols=31 Identities=29% Similarity=0.463 Sum_probs=28.0
Q ss_pred cEEEECC-cHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 90 DFSVIGS-GVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVvIIGg-G~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
.|+|+|| |..|...+..|.++| +|+++.+..
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 3899995 999999999999999 999999864
No 414
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=66.77 E-value=3.4 Score=42.99 Aligned_cols=33 Identities=21% Similarity=0.128 Sum_probs=29.5
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
...|+|||.|..|..+|..|...| +|++.|+.+
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 357999999999999999999999 999998753
No 415
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=66.46 E-value=4.9 Score=43.79 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=30.9
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
-.|+|||+|-.|...|..|.+.| +|+++|+.+.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~ 382 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQES 382 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChH
Confidence 57999999999999999999999 9999998874
No 416
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=66.39 E-value=4.7 Score=37.99 Aligned_cols=32 Identities=19% Similarity=0.343 Sum_probs=29.0
Q ss_pred ccEEEECC-cHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGS-GVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGg-G~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|+|.|| |..|...+..|.++| +|+++.+..
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 46999998 999999999999999 999999864
No 417
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=66.29 E-value=4 Score=41.68 Aligned_cols=33 Identities=21% Similarity=0.247 Sum_probs=29.9
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
...|.|||.|..|...|..|++.| +|+++++.+
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 457999999999999999999999 999998754
No 418
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=66.18 E-value=3.5 Score=44.03 Aligned_cols=32 Identities=22% Similarity=0.203 Sum_probs=28.9
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
-.|+|||.|..|..+|..|...| +|+++|+.+
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46999999999999999999999 999998753
No 419
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=65.92 E-value=4.4 Score=40.71 Aligned_cols=33 Identities=27% Similarity=0.280 Sum_probs=28.9
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC--CeEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~ 120 (647)
...|.|||+|..|.+.|..|+..| .|+|+|...
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 357999999999999999999988 688988754
No 420
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=65.82 E-value=3.8 Score=42.88 Aligned_cols=31 Identities=19% Similarity=0.451 Sum_probs=28.0
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|.|||.|..|+..|..|++ | +|+++++.+
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 479999999999999999998 9 999999754
No 421
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=65.75 E-value=5.8 Score=38.60 Aligned_cols=32 Identities=22% Similarity=0.373 Sum_probs=29.4
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
.|+|.|+|..|...+..|.++| +|+++.+...
T Consensus 5 ~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 5 KILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 5999999999999999999999 9999998753
No 422
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=65.68 E-value=4.3 Score=41.50 Aligned_cols=30 Identities=20% Similarity=0.276 Sum_probs=27.4
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEe
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITK 118 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk 118 (647)
..|+|+|.|..|..+|..|.+.| +|++.|.
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVvv~D~ 204 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLVVTDV 204 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEcC
Confidence 46999999999999999999999 9998774
No 423
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=65.65 E-value=3.7 Score=44.34 Aligned_cols=35 Identities=11% Similarity=0.162 Sum_probs=31.5
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC--CeEEEEecCC
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEP 121 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~~ 121 (647)
....|+|||+|..|..+|..|+..| +++|+|....
T Consensus 31 ~~~~VlvvG~GGlGseiak~La~aGVg~itlvD~D~V 67 (531)
T 1tt5_A 31 ESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQV 67 (531)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHTTTCSEEEEECCCBB
T ss_pred hcCeEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEe
Confidence 3578999999999999999999999 8999997764
No 424
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=65.46 E-value=5.2 Score=37.17 Aligned_cols=30 Identities=27% Similarity=0.516 Sum_probs=27.7
Q ss_pred EEEECC-cHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 91 FSVIGS-GVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 91 VvIIGg-G~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
|+|.|| |..|...+..|.++| +|+++.+..
T Consensus 3 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 899998 999999999999999 999998854
No 425
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=65.43 E-value=3.6 Score=40.67 Aligned_cols=33 Identities=21% Similarity=0.207 Sum_probs=30.1
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
..|.|||.|..|...|..|++.| +|+++++.+.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 47999999999999999999999 9999998653
No 426
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=65.35 E-value=4.1 Score=40.98 Aligned_cols=31 Identities=29% Similarity=0.565 Sum_probs=27.3
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC---CeEEEEec
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG---TVAVITKA 119 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G---~V~vlEk~ 119 (647)
..|.|||+|..|.+.|+.|+..| .|+++|..
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 46999999999999999999987 68888863
No 427
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=65.33 E-value=4.7 Score=39.94 Aligned_cols=31 Identities=16% Similarity=0.444 Sum_probs=28.3
Q ss_pred cEEEEC-CcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 90 DFSVIG-SGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVvIIG-gG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
.|.||| .|..|.+.|..|++.| +|.++++..
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 699999 9999999999999999 999998653
No 428
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=65.30 E-value=5.2 Score=36.45 Aligned_cols=31 Identities=23% Similarity=0.515 Sum_probs=28.5
Q ss_pred cEEEECC-cHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 90 DFSVIGS-GVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVvIIGg-G~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
.|+|+|| |..|...+..|.++| +|+++.+..
T Consensus 5 ~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 5 KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 5899998 999999999999999 999999865
No 429
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=65.28 E-value=4.4 Score=40.16 Aligned_cols=32 Identities=19% Similarity=0.286 Sum_probs=28.9
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|.|||.|..|...|..|++.| +|+++++.+
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 46999999999999999999999 999998743
No 430
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=65.01 E-value=3.7 Score=42.73 Aligned_cols=30 Identities=23% Similarity=0.400 Sum_probs=27.2
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
.|.|||.|..|+..|..|++ | +|+++++..
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 48999999999999999999 9 999998753
No 431
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=64.88 E-value=3.7 Score=40.35 Aligned_cols=31 Identities=23% Similarity=0.445 Sum_probs=28.7
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
.|.|||.|..|...|..|++.| +|+++++.+
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 5899999999999999999999 999998764
No 432
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=64.71 E-value=3.3 Score=42.30 Aligned_cols=30 Identities=30% Similarity=0.357 Sum_probs=28.0
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CeEEEEec
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~ 119 (647)
.|.|||+|..|...|..|++.| +|.++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 6999999999999999999999 99999874
No 433
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=64.64 E-value=3.7 Score=39.69 Aligned_cols=31 Identities=23% Similarity=0.153 Sum_probs=27.3
Q ss_pred cEEEECC-c-HHHHHHHHHHHhcC-CeEEEEecC
Q 006397 90 DFSVIGS-G-VAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVvIIGg-G-~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
-|+|.|| | ..|...|..|+++| +|+++.+..
T Consensus 24 ~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 24 VVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp EEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 4889998 7 59999999999999 999998753
No 434
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=64.35 E-value=5.4 Score=38.57 Aligned_cols=30 Identities=30% Similarity=0.401 Sum_probs=27.9
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CeEEEEec
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~ 119 (647)
.|+|||+|.+|...|..|.+.| +|+++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 7999999999999999999999 99999874
No 435
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=63.49 E-value=5.1 Score=39.04 Aligned_cols=30 Identities=20% Similarity=0.453 Sum_probs=27.2
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CeEEEEec
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~ 119 (647)
.|.|||+|..|...|..|++.| +|+++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 4899999999999999999999 99998764
No 436
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=63.43 E-value=5.7 Score=42.49 Aligned_cols=33 Identities=36% Similarity=0.562 Sum_probs=30.4
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
+..|.|||.|..|...|..|++.| +|++.++.+
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 468999999999999999999999 999999864
No 437
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=63.42 E-value=5.5 Score=40.19 Aligned_cols=30 Identities=13% Similarity=-0.034 Sum_probs=25.9
Q ss_pred cEEEECCcHHHHHHHHHHHhcC--CeEEEEec
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG--TVAVITKA 119 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~ 119 (647)
.|+|+|+|..|+.++..|+..+ +|+.++..
T Consensus 166 ~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~ 197 (348)
T 4eez_A 166 WQVIFGAGGLGNLAIQYAKNVFGAKVIAVDIN 197 (348)
T ss_dssp EEEEECCSHHHHHHHHHHHHTSCCEEEEEESC
T ss_pred EEEEEcCCCccHHHHHHHHHhCCCEEEEEECc
Confidence 5999999999999999998775 88888864
No 438
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=63.32 E-value=4 Score=42.39 Aligned_cols=28 Identities=29% Similarity=0.334 Sum_probs=26.2
Q ss_pred cEEEECCcHHHHHHHHHHHh-cC-CeEEEE
Q 006397 90 DFSVIGSGVAGLCYALEVAK-HG-TVAVIT 117 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~-~G-~V~vlE 117 (647)
.|.|||+|..|...|..|++ .| +|++++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 69999999999999999998 49 999998
No 439
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=63.32 E-value=4.6 Score=40.47 Aligned_cols=30 Identities=23% Similarity=0.498 Sum_probs=26.8
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC---CeEEEEe
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG---TVAVITK 118 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G---~V~vlEk 118 (647)
..|.|||+|..|.+.|+.|+..| .|+++|.
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di 39 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDL 39 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 57999999999999999999887 5888885
No 440
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=62.98 E-value=5.4 Score=38.77 Aligned_cols=32 Identities=13% Similarity=0.183 Sum_probs=29.1
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|+|+|+|..|...+..|.++| +|+++.+..
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 36999999999999999999999 999998854
No 441
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=62.78 E-value=3.9 Score=40.86 Aligned_cols=32 Identities=25% Similarity=0.182 Sum_probs=28.5
Q ss_pred cccEEEECCc-HHHHHHHHHHHhcC-CeEEEEec
Q 006397 88 YFDFSVIGSG-VAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 88 ~~DVvIIGgG-~AGl~aA~~la~~G-~V~vlEk~ 119 (647)
...|+|||+| +.|..+|..|...| +|+++++.
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 4689999999 67999999999999 99999775
No 442
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=62.66 E-value=5.8 Score=40.13 Aligned_cols=30 Identities=17% Similarity=0.298 Sum_probs=27.1
Q ss_pred ccEEEECC-cHHHHHHHHHHHhcC---CeEEEEe
Q 006397 89 FDFSVIGS-GVAGLCYALEVAKHG---TVAVITK 118 (647)
Q Consensus 89 ~DVvIIGg-G~AGl~aA~~la~~G---~V~vlEk 118 (647)
..|.|||+ |..|.++|+.++..| .|+|+|.
T Consensus 9 ~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi 42 (343)
T 3fi9_A 9 EKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDP 42 (343)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECS
T ss_pred CEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeC
Confidence 47999997 999999999999988 6999986
No 443
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=62.47 E-value=5.8 Score=39.94 Aligned_cols=31 Identities=19% Similarity=0.435 Sum_probs=27.5
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC---CeEEEEe
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG---TVAVITK 118 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G---~V~vlEk 118 (647)
...|.|||+|..|.+.|+.|+.+| .++|+|.
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di 52 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADELALVDV 52 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeC
Confidence 357999999999999999999988 5888886
No 444
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=62.44 E-value=7.3 Score=38.67 Aligned_cols=32 Identities=41% Similarity=0.595 Sum_probs=29.1
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|.|||.|..|...|..|++.| +|++.++.+
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 47999999999999999999999 999998753
No 445
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=62.41 E-value=4.7 Score=39.84 Aligned_cols=30 Identities=20% Similarity=0.324 Sum_probs=26.6
Q ss_pred cEEEECCcHHHHHHHHHHHhcC---CeEEEEec
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG---TVAVITKA 119 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G---~V~vlEk~ 119 (647)
.|.|||+|-.|.++|+.|+.++ .++|+|..
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~ 34 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIA 34 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4899999999999999999887 68899863
No 446
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=61.90 E-value=6 Score=42.17 Aligned_cols=33 Identities=27% Similarity=0.492 Sum_probs=30.0
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..+|.|||.|..|...|..|++.| +|++.++.+
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 458999999999999999999999 999998753
No 447
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=61.86 E-value=4.4 Score=37.09 Aligned_cols=30 Identities=10% Similarity=0.117 Sum_probs=26.2
Q ss_pred cEEEEC-CcHHHHHHHHHHHhcC-CeEEEEec
Q 006397 90 DFSVIG-SGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVvIIG-gG~AGl~aA~~la~~G-~V~vlEk~ 119 (647)
.|+|+| +|..|..++..++..| +|+++++.
T Consensus 41 ~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~ 72 (198)
T 1pqw_A 41 RVLIHSATGGVGMAAVSIAKMIGARIYTTAGS 72 (198)
T ss_dssp EEEETTTTSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred EEEEeeCCChHHHHHHHHHHHcCCEEEEEeCC
Confidence 589999 5999999999999999 99988864
No 448
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=61.81 E-value=6.3 Score=40.57 Aligned_cols=32 Identities=28% Similarity=0.470 Sum_probs=29.3
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
.-|+|||+|..|...|..|.+.| +|++++..+
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~ 47 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTK 47 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 46999999999999999999999 999998754
No 449
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=61.68 E-value=6.9 Score=37.11 Aligned_cols=30 Identities=27% Similarity=0.368 Sum_probs=27.2
Q ss_pred EEEECC-cHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 91 FSVIGS-GVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 91 VvIIGg-G~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
|+|.|| |..|...|..|+++| +|+++.+..
T Consensus 4 vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~ 35 (255)
T 2dkn_A 4 IAITGSASGIGAALKELLARAGHTVIGIDRGQ 35 (255)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCh
Confidence 788987 899999999999999 999999864
No 450
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=61.38 E-value=5.9 Score=40.29 Aligned_cols=32 Identities=22% Similarity=0.278 Sum_probs=27.8
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
-.|+|+|+|..|+.++..+...| +|+++++.+
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~ 213 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAMGAETYVISRSS 213 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 36999999999999998888889 999888654
No 451
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=61.29 E-value=5.8 Score=40.12 Aligned_cols=32 Identities=25% Similarity=0.257 Sum_probs=27.7
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
-.|+|+|+|..|+.++..+...| +|++++..+
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~ 210 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNE 210 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 36999999999999988888899 999888654
No 452
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=61.28 E-value=5.5 Score=44.84 Aligned_cols=32 Identities=22% Similarity=0.274 Sum_probs=29.3
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|.|||+|..|...|..+++.| +|+++|+.+
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 36999999999999999999999 999999754
No 453
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=61.15 E-value=4.6 Score=40.43 Aligned_cols=32 Identities=22% Similarity=0.418 Sum_probs=29.1
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|.|||.|..|...|..|++.| +|+++++.+
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 47999999999999999999999 999998753
No 454
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=61.07 E-value=8.8 Score=39.32 Aligned_cols=33 Identities=30% Similarity=0.436 Sum_probs=29.7
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
..|+|||+|.-|...+..+.+.| +|++++..+.
T Consensus 13 ~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 13 ATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 46999999999999999999999 9999987553
No 455
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=61.00 E-value=6.4 Score=40.18 Aligned_cols=32 Identities=22% Similarity=0.287 Sum_probs=27.9
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
-.|+|+|+|..|+.++..|...| +|+++++.+
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~ 221 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSP 221 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 36999999999999999998899 999888643
No 456
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=60.84 E-value=5 Score=39.50 Aligned_cols=30 Identities=23% Similarity=0.411 Sum_probs=25.4
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCeEEEEe
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHGTVAVITK 118 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G~V~vlEk 118 (647)
..++|+|+|.+|..+|..|++.|+|+++.+
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G~V~v~~r 158 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDNNIIIANR 158 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSSEEEEECS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEC
Confidence 359999999999999999999886666665
No 457
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=60.72 E-value=5.5 Score=39.56 Aligned_cols=32 Identities=22% Similarity=0.530 Sum_probs=27.5
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC---CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG---TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G---~V~vlEk~~ 120 (647)
..|.|||+|..|...|+.++..| .|+|+|...
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 47999999999999999999888 588998754
No 458
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=60.66 E-value=5.1 Score=41.61 Aligned_cols=31 Identities=26% Similarity=0.379 Sum_probs=27.3
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC--CeEEEEec
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG--TVAVITKA 119 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~ 119 (647)
..|+|||+|..|..+|..|...| +|+++++.
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~ 200 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRT 200 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCSEEEEECSS
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 46999999999999999999989 68888764
No 459
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=60.51 E-value=6.8 Score=41.76 Aligned_cols=32 Identities=28% Similarity=0.486 Sum_probs=29.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
.+|.|||.|..|...|..|++.| +|+++++..
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 36999999999999999999999 999998754
No 460
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=60.49 E-value=5.5 Score=40.01 Aligned_cols=31 Identities=19% Similarity=0.458 Sum_probs=27.3
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC---CeEEEEec
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG---TVAVITKA 119 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G---~V~vlEk~ 119 (647)
..|.|||+|..|.+.|+.|+..| .++|+|..
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 46999999999999999999987 58888863
No 461
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=60.38 E-value=5.5 Score=39.85 Aligned_cols=31 Identities=26% Similarity=0.557 Sum_probs=27.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC---CeEEEEec
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG---TVAVITKA 119 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G---~V~vlEk~ 119 (647)
..|.|||+|..|.+.|+.|+..| .|+++|..
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 47999999999999999998877 68888864
No 462
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=60.37 E-value=7 Score=39.26 Aligned_cols=30 Identities=23% Similarity=0.405 Sum_probs=27.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC---CeEEEEe
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG---TVAVITK 118 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G---~V~vlEk 118 (647)
..|.|||+|..|.+.|+.++..| .|+++|.
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di 54 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLADEVALVDV 54 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEC
Confidence 57999999999999999999988 5888886
No 463
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=60.26 E-value=5.8 Score=45.32 Aligned_cols=36 Identities=25% Similarity=0.255 Sum_probs=32.5
Q ss_pred ccccEEEECCcHHHHHHHHHHHhcC--CeEEEEecCCC
Q 006397 87 KYFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPH 122 (647)
Q Consensus 87 ~~~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~~~ 122 (647)
....|+|||+|..|+.+|..|+..| +++|+|.....
T Consensus 410 ~~~~vlvvG~GglG~~~~~~L~~~Gvg~i~l~D~d~v~ 447 (805)
T 2nvu_B 410 DTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTID 447 (805)
T ss_dssp HTCCEEEECCSSHHHHHHHHHHTTTCCEEEEEECCBCC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCcEEEECCCeec
Confidence 3578999999999999999999999 89999987754
No 464
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=60.21 E-value=6.7 Score=40.10 Aligned_cols=31 Identities=26% Similarity=0.263 Sum_probs=26.9
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
.|+|+|+|..|+.++..+...| +|++++..+
T Consensus 197 ~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~ 228 (369)
T 1uuf_A 197 KVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSE 228 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5999999999999988888889 988888643
No 465
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=60.12 E-value=5 Score=39.68 Aligned_cols=31 Identities=26% Similarity=0.362 Sum_probs=28.4
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
.|.|||.|..|...|..|++.| +|+++++..
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 5899999999999999999999 999998753
No 466
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=59.86 E-value=6 Score=39.54 Aligned_cols=31 Identities=29% Similarity=0.433 Sum_probs=27.3
Q ss_pred cEEEECCcHHHHHHHHHHHhcC---CeEEEEecC
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG---TVAVITKAE 120 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G---~V~vlEk~~ 120 (647)
.|.|||+|..|.+.|+.++..| .|+++|...
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 4899999999999999999887 688998754
No 467
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=59.82 E-value=4.8 Score=42.15 Aligned_cols=32 Identities=31% Similarity=0.459 Sum_probs=29.3
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
....|||.|..|+..|..|++.| +|+++++.+
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 46889999999999999999999 999999754
No 468
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=59.79 E-value=6.1 Score=38.81 Aligned_cols=31 Identities=26% Similarity=0.319 Sum_probs=28.1
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
.|.|||.|..|...|..|++.| +|+++++..
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4899999999999999999999 999998754
No 469
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=59.76 E-value=7.2 Score=39.46 Aligned_cols=32 Identities=13% Similarity=0.204 Sum_probs=28.9
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|.|||.|..|.+.|..|.+.| +|++.++.+
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 36999999999999999999999 999998754
No 470
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=59.72 E-value=6.5 Score=38.51 Aligned_cols=30 Identities=20% Similarity=0.361 Sum_probs=27.8
Q ss_pred cEEEECC-cHHHHHHHHHHHhcC-CeEEEEec
Q 006397 90 DFSVIGS-GVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVvIIGg-G~AGl~aA~~la~~G-~V~vlEk~ 119 (647)
.|.|||+ |..|...|..|++.| +|+++++.
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSSSEEEEECCS
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 6999999 999999999999999 99998864
No 471
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=59.68 E-value=6.9 Score=41.64 Aligned_cols=31 Identities=42% Similarity=0.664 Sum_probs=28.6
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
+|.|||.|..|...|..|++.| +|+++++..
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 6999999999999999999999 999998753
No 472
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=59.68 E-value=5.8 Score=39.21 Aligned_cols=30 Identities=20% Similarity=0.324 Sum_probs=26.5
Q ss_pred cEEEECCcHHHHHHHHHHHhcC---CeEEEEec
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG---TVAVITKA 119 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G---~V~vlEk~ 119 (647)
.|.|||+|..|.+.|+.|++.| .|+|+|..
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~ 34 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIA 34 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 4899999999999999999987 58888864
No 473
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=59.64 E-value=7.5 Score=39.24 Aligned_cols=32 Identities=25% Similarity=0.348 Sum_probs=28.6
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|.|||.|..|.+.|..|++.| +|++.++..
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 36999999999999999999999 999888753
No 474
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=59.62 E-value=6.4 Score=39.40 Aligned_cols=30 Identities=23% Similarity=0.562 Sum_probs=27.1
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC---CeEEEEe
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG---TVAVITK 118 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G---~V~vlEk 118 (647)
..|.|||+|..|.+.|+.|+..+ .++|+|.
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di 38 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDV 38 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 57999999999999999999887 5888886
No 475
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=59.58 E-value=7.2 Score=39.74 Aligned_cols=31 Identities=23% Similarity=0.164 Sum_probs=27.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEec
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~ 119 (647)
-.|+|+|+|..|+.++..+...| +|++++..
T Consensus 191 ~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~ 222 (363)
T 3uog_A 191 DRVVVQGTGGVALFGLQIAKATGAEVIVTSSS 222 (363)
T ss_dssp CEEEEESSBHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEecC
Confidence 46999999999999998888899 99988853
No 476
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=59.40 E-value=5.2 Score=44.85 Aligned_cols=33 Identities=21% Similarity=0.166 Sum_probs=29.8
Q ss_pred ccEEEEC--CcHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 89 FDFSVIG--SGVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 89 ~DVvIIG--gG~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
-+|+||| +|..|+-+|..|++.| +|+++++.+.
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~ 559 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQ 559 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccc
Confidence 3599999 9999999999999999 9999998654
No 477
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=59.40 E-value=5.6 Score=38.84 Aligned_cols=30 Identities=23% Similarity=0.272 Sum_probs=27.1
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
.|.|||.|..|...|..|++ | +|+++++..
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 58999999999999999999 9 999998753
No 478
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=59.29 E-value=6.2 Score=40.26 Aligned_cols=32 Identities=25% Similarity=0.401 Sum_probs=28.0
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
-.|+|+|+|..|+.++..+...| +|+++++..
T Consensus 182 ~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~ 214 (366)
T 2cdc_A 182 RKVLVVGTGPIGVLFTLLFRTYGLEVWMANRRE 214 (366)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHTCEEEEEESSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 36999999999999999998899 999998653
No 479
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=59.04 E-value=5.8 Score=41.47 Aligned_cols=32 Identities=28% Similarity=0.156 Sum_probs=28.9
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|+|||.|..|..+|..|...| +|++.|..+
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp 280 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDP 280 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 46999999999999999999999 999998754
No 480
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=58.72 E-value=16 Score=38.10 Aligned_cols=54 Identities=13% Similarity=0.060 Sum_probs=38.8
Q ss_pred HHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 217 ERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 217 ~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
.+.+.+.++++ ||+++.++.|+++.. + ++.+.+ .+|+..++.+|.||+|+|-.+
T Consensus 203 ~~~l~~~l~~~-GV~~~~~~~v~~v~~---~------~~~~~~-~~g~~~~i~~d~vi~~~G~~~ 256 (430)
T 3hyw_A 203 KRLVEDLFAER-NIDWIANVAVKAIEP---D------KVIYED-LNGNTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHHHHHHHHHT-TCEEECSCEEEEECS---S------EEEEEC-TTSCEEEEECSEEEEECEEEC
T ss_pred HHHHHHHHHhC-CeEEEeCceEEEEeC---C------ceEEEe-eCCCceEeecceEEEeccCCC
Confidence 34455556664 999999999999843 2 244444 456667899999999999655
No 481
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=58.69 E-value=6.9 Score=37.95 Aligned_cols=31 Identities=19% Similarity=0.139 Sum_probs=27.4
Q ss_pred cEEEECC---cHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 90 DFSVIGS---GVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 90 DVvIIGg---G~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
-|+|.|| |..|...|..|+++| +|+++.+..
T Consensus 8 ~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~ 42 (275)
T 2pd4_A 8 KGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE 42 (275)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST
T ss_pred EEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4889997 689999999999999 999998764
No 482
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=58.50 E-value=6.9 Score=39.74 Aligned_cols=31 Identities=26% Similarity=0.232 Sum_probs=27.7
Q ss_pred cccEEEECCcHHHHHHHHHHHhcC-CeEEEEe
Q 006397 88 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITK 118 (647)
Q Consensus 88 ~~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk 118 (647)
..-|+|+|.|..|..+|..|.+.| +|++.|.
T Consensus 175 GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~ 206 (355)
T 1c1d_A 175 GLTVLVQGLGAVGGSLASLAAEAGAQLLVADT 206 (355)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEeC
Confidence 357999999999999999999999 9997763
No 483
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=58.44 E-value=7.4 Score=39.01 Aligned_cols=32 Identities=19% Similarity=0.210 Sum_probs=28.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC--CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG--TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~ 120 (647)
..|.|||+|..|.+.|..|+..| .|+++|...
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 46999999999999999999988 788888754
No 484
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=58.30 E-value=6.2 Score=39.22 Aligned_cols=30 Identities=23% Similarity=0.371 Sum_probs=26.8
Q ss_pred cEEEECCcHHHHHHHHHHHhcC---CeEEEEec
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG---TVAVITKA 119 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G---~V~vlEk~ 119 (647)
.|.|||+|..|...|..|++.| .|+++++.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~ 35 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDAN 35 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCC
Confidence 5899999999999999999988 68888874
No 485
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=58.02 E-value=8.3 Score=38.94 Aligned_cols=32 Identities=22% Similarity=0.147 Sum_probs=28.0
Q ss_pred ccEEEECC-cHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGS-GVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGg-G~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
-.|+|+|+ |..|+.++..++..| +|+++++..
T Consensus 171 ~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~ 204 (347)
T 2hcy_A 171 HWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGE 204 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECST
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCH
Confidence 36999999 899999999999999 999998753
No 486
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=57.95 E-value=6.7 Score=44.09 Aligned_cols=32 Identities=25% Similarity=0.359 Sum_probs=29.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|.|||+|..|...|..+++.| +|+++|+.+
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 36999999999999999999999 999999754
No 487
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=57.94 E-value=9.4 Score=38.24 Aligned_cols=34 Identities=24% Similarity=0.219 Sum_probs=29.5
Q ss_pred cccEEEECC-cHHHHHHHHHHHhcC-CeEEEEecCC
Q 006397 88 YFDFSVIGS-GVAGLCYALEVAKHG-TVAVITKAEP 121 (647)
Q Consensus 88 ~~DVvIIGg-G~AGl~aA~~la~~G-~V~vlEk~~~ 121 (647)
..-|+|.|| |..|...+..|.++| +|+++.+...
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 356999998 999999999999999 9999998754
No 488
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=57.86 E-value=6.4 Score=39.39 Aligned_cols=30 Identities=20% Similarity=0.403 Sum_probs=26.4
Q ss_pred cEEEECCcHHHHHHHHHHHhcC---CeEEEEec
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG---TVAVITKA 119 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G---~V~vlEk~ 119 (647)
.|.|||+|..|...|..|++.| .|+++|+.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 4899999999999999999987 58888864
No 489
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=57.81 E-value=8.6 Score=40.58 Aligned_cols=56 Identities=11% Similarity=-0.036 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCccc
Q 006397 215 EIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAG 281 (647)
Q Consensus 215 ~~~~~L~~~~~~~~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 281 (647)
.+...|.+.+ |++|+.+++|++|..++ + . +.|.+.+..+|+ ++.||.||+|++...
T Consensus 239 ~l~~~l~~~l----g~~i~~~~~V~~i~~~~-~---~-~~v~~~~~~~g~--~~~ad~vV~a~~~~~ 294 (478)
T 2ivd_A 239 VLIDALAASL----GDAAHVGARVEGLARED-G---G-WRLIIEEHGRRA--ELSVAQVVLAAPAHA 294 (478)
T ss_dssp HHHHHHHHHH----GGGEESSEEEEEEECC------C-CEEEEEETTEEE--EEECSEEEECSCHHH
T ss_pred HHHHHHHHHh----hhhEEcCCEEEEEEecC-C---e-EEEEEeecCCCc--eEEcCEEEECCCHHH
Confidence 4666666554 57899999999998763 3 2 234432212343 689999999998654
No 490
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=57.80 E-value=6.2 Score=39.12 Aligned_cols=30 Identities=30% Similarity=0.458 Sum_probs=26.8
Q ss_pred ccEEEECCcHHHHHHHHHHHhc-----C--CeEEEEe
Q 006397 89 FDFSVIGSGVAGLCYALEVAKH-----G--TVAVITK 118 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~-----G--~V~vlEk 118 (647)
..|.|||+|..|...|..|++. | +|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 3699999999999999999998 7 7888876
No 491
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=57.77 E-value=8.7 Score=35.64 Aligned_cols=30 Identities=7% Similarity=0.222 Sum_probs=27.1
Q ss_pred EEEECC-cHHHHHHHHHHH-hcC-CeEEEEecC
Q 006397 91 FSVIGS-GVAGLCYALEVA-KHG-TVAVITKAE 120 (647)
Q Consensus 91 VvIIGg-G~AGl~aA~~la-~~G-~V~vlEk~~ 120 (647)
|+|.|| |..|...|..|+ +.| +|+++.+..
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 899995 999999999999 899 999999864
No 492
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=57.75 E-value=5.8 Score=39.04 Aligned_cols=31 Identities=23% Similarity=0.413 Sum_probs=28.1
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEec
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~ 119 (647)
..|.|||+|..|...|..|++.| +|.++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 36999999999999999999999 99998864
No 493
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=57.64 E-value=11 Score=39.71 Aligned_cols=56 Identities=7% Similarity=0.042 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHcC-------CCcEEEcceEEEEEEecCCCCCceEEEEEEEecCCCeEEEEEcCeEEECCCcc
Q 006397 215 EIERALLEAVVSD-------PNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGA 280 (647)
Q Consensus 215 ~~~~~L~~~~~~~-------~gv~i~~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 280 (647)
.+...|.+.+.+. .+++|+.+++|++|..+++ .+. |.+ .+|+ ++.||.||+|++..
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~----~v~-v~~---~~g~--~~~ad~vI~a~~~~ 269 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPG----GVT-VKT---EDNS--VYSADYVMVSASLG 269 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSS----CEE-EEE---TTSC--EEEESEEEECSCHH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCC----cEE-EEE---CCCC--EEEcCEEEEecCHH
Confidence 4566676665432 2678999999999988643 232 322 4565 58999999999854
No 494
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=57.55 E-value=7.7 Score=38.60 Aligned_cols=31 Identities=19% Similarity=0.485 Sum_probs=27.2
Q ss_pred cEEEECCcHHHHHHHHHHHhcC--CeEEEEecC
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG--TVAVITKAE 120 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G--~V~vlEk~~ 120 (647)
.|.|||+|..|.+.|+.++..| .|+|+|...
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 3789999999999999999888 599999753
No 495
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=57.42 E-value=8.8 Score=40.82 Aligned_cols=32 Identities=28% Similarity=0.486 Sum_probs=29.8
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
.+|.|||.|..|...|..|++.| +|++.++.+
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 47999999999999999999999 999999865
No 496
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=57.29 E-value=7.7 Score=39.41 Aligned_cols=32 Identities=22% Similarity=0.263 Sum_probs=27.6
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
-.|+|+|+|..|+.++..+...| +|++++..+
T Consensus 182 ~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~ 214 (357)
T 2cf5_A 182 LRGGILGLGGVGHMGVKIAKAMGHHVTVISSSN 214 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESST
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCh
Confidence 36999999999999998888889 999888643
No 497
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=57.25 E-value=5.1 Score=42.74 Aligned_cols=32 Identities=22% Similarity=0.254 Sum_probs=28.5
Q ss_pred ccEEEECCcHHHHHHHHHHHhc--C-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKH--G-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~--G-~V~vlEk~~ 120 (647)
..|.|||.|..|+..|..|++. | +|+++++..
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 3699999999999999999998 7 899998753
No 498
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=56.81 E-value=5.8 Score=44.63 Aligned_cols=32 Identities=25% Similarity=0.409 Sum_probs=29.3
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEecC
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 120 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~~ 120 (647)
..|.|||+|..|...|..++..| .|+|+|..+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 47999999999999999999999 999999643
No 499
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=56.65 E-value=8.6 Score=38.89 Aligned_cols=30 Identities=30% Similarity=0.431 Sum_probs=26.1
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CeEEEEec
Q 006397 90 DFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 90 DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~ 119 (647)
.|+|+|+|..|+.++..+...| +|+++++.
T Consensus 171 ~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~ 201 (352)
T 1e3j_A 171 TVLVIGAGPIGLVSVLAAKAYGAFVVCTARS 201 (352)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEcCC
Confidence 5999999999999988888889 98888753
No 500
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=56.64 E-value=6.9 Score=39.36 Aligned_cols=31 Identities=19% Similarity=0.095 Sum_probs=27.0
Q ss_pred ccEEEECCcHHHHHHHHHHHhcC-CeEEEEec
Q 006397 89 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 119 (647)
Q Consensus 89 ~DVvIIGgG~AGl~aA~~la~~G-~V~vlEk~ 119 (647)
-.|+|+|+|..|+.++..+...| +|+.++..
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~ 199 (340)
T 3s2e_A 168 QWVVISGIGGLGHVAVQYARAMGLRVAAVDID 199 (340)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 35999999999999998888899 99998864
Done!