Query 006398
Match_columns 647
No_of_seqs 386 out of 3262
Neff 9.3
Searched_HMMs 13730
Date Tue Mar 26 00:00:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006398.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/006398hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1u1qa_ d.58.7.1 (A:) Nuclear 100.0 9E-28 6.5E-32 224.4 20.2 171 256-440 6-177 (183)
2 d1u1qa_ d.58.7.1 (A:) Nuclear 99.9 1.1E-23 8.3E-28 196.2 20.9 166 360-638 6-177 (183)
3 d1o0pa_ d.58.7.1 (A:) Splicing 99.8 2.8E-19 2.1E-23 148.3 10.8 94 549-642 1-101 (104)
4 d2cq4a1 d.58.7.1 (A:132-232) R 99.7 1.2E-18 8.6E-23 143.5 7.8 82 255-336 17-98 (101)
5 d1uawa_ d.58.7.1 (A:) Musashi- 99.7 1.4E-18 1E-22 135.4 7.1 76 257-332 1-76 (77)
6 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.7 5.3E-18 3.9E-22 134.7 9.1 77 256-332 6-82 (84)
7 d1hd0a_ d.58.7.1 (A:) Heteroge 99.7 4.6E-18 3.3E-22 131.9 8.3 75 258-332 1-75 (75)
8 d1b7fa1 d.58.7.1 (A:123-204) S 99.7 5.1E-18 3.7E-22 134.6 8.6 79 256-334 2-81 (82)
9 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.7 8.3E-18 6E-22 136.4 9.3 80 256-335 9-89 (93)
10 d2u2fa_ d.58.7.1 (A:) Splicing 99.7 6.6E-18 4.8E-22 134.5 8.5 78 257-334 2-80 (85)
11 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.7 1E-17 7.5E-22 134.4 9.6 80 255-334 6-86 (88)
12 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.7 1.1E-17 7.7E-22 135.8 9.4 80 254-333 5-85 (93)
13 d1cvja1 d.58.7.1 (A:11-90) Pol 99.7 9.2E-18 6.7E-22 132.2 8.7 76 258-333 2-78 (80)
14 d1whwa_ d.58.7.1 (A:) Probable 99.7 1.3E-17 9.5E-22 137.2 9.9 84 254-337 6-90 (99)
15 d1x0fa1 d.58.7.1 (A:183-257) N 99.7 6.4E-18 4.6E-22 130.6 7.3 75 258-332 1-75 (75)
16 d2cqga1 d.58.7.1 (A:96-185) TA 99.7 1.9E-17 1.4E-21 132.9 9.9 81 254-335 6-86 (90)
17 d2cq0a1 d.58.7.1 (A:231-320) E 99.7 1.1E-17 8.4E-22 134.8 8.3 81 255-335 7-88 (90)
18 d2cqba1 d.58.7.1 (A:1-89) Pept 99.7 6.9E-18 5E-22 135.9 6.7 80 255-334 4-84 (89)
19 d1l3ka2 d.58.7.1 (A:103-181) N 99.7 2E-17 1.5E-21 130.1 8.9 76 257-332 3-78 (79)
20 d2cqca1 d.58.7.1 (A:109-191) A 99.7 2.2E-17 1.6E-21 131.1 9.2 75 255-329 8-83 (83)
21 d1x4ba1 d.58.7.1 (A:8-110) Het 99.7 1.3E-17 9.6E-22 137.5 8.0 80 256-335 20-99 (103)
22 d1fxla1 d.58.7.1 (A:37-118) Hu 99.7 3.2E-17 2.3E-21 130.0 9.6 78 257-334 3-81 (82)
23 d1fxla2 d.58.7.1 (A:119-203) H 99.7 3.6E-17 2.6E-21 130.3 9.5 77 256-332 6-85 (85)
24 d2cpza1 d.58.7.1 (A:383-484) C 99.7 3.6E-17 2.6E-21 135.1 9.8 82 255-336 17-99 (102)
25 d1p1ta_ d.58.7.1 (A:) Cleavage 99.7 1.7E-17 1.2E-21 137.9 7.8 82 256-337 8-90 (104)
26 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.7 2.2E-17 1.6E-21 133.4 8.2 81 255-335 4-85 (90)
27 d1b7fa2 d.58.7.1 (A:205-289) S 99.7 5.5E-17 4E-21 129.3 9.6 78 255-332 5-85 (85)
28 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.7 9.2E-17 6.7E-21 141.1 12.0 82 255-336 41-123 (139)
29 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.7 1.1E-16 8.3E-21 128.2 11.4 81 359-439 6-87 (88)
30 d2cpha1 d.58.7.1 (A:454-547) P 99.7 5.7E-17 4.1E-21 131.7 9.4 82 254-335 6-90 (94)
31 d2cqda1 d.58.7.1 (A:1-103) RNA 99.7 9.7E-17 7.1E-21 132.7 10.6 81 255-335 9-89 (103)
32 d2dita1 d.58.7.1 (A:8-106) HIV 99.7 7.4E-17 5.4E-21 132.0 9.7 87 550-636 6-94 (99)
33 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.7 8.8E-17 6.4E-21 129.6 9.9 80 254-335 6-86 (90)
34 d2ghpa1 d.58.7.1 (A:116-196) U 99.7 3.3E-17 2.4E-21 129.4 7.1 78 257-334 2-80 (81)
35 d2msta_ d.58.7.1 (A:) Neural R 99.7 3.6E-17 2.6E-21 127.3 7.1 75 258-332 1-75 (75)
36 d1b7fa1 d.58.7.1 (A:123-204) S 99.7 1E-16 7.5E-21 126.9 9.8 79 360-438 2-81 (82)
37 d1fxla1 d.58.7.1 (A:37-118) Hu 99.7 1.7E-16 1.3E-20 125.6 11.0 78 361-438 3-81 (82)
38 d1no8a_ d.58.7.1 (A:) Nuclear 99.7 1.4E-16 1E-20 124.5 10.2 76 362-437 2-77 (78)
39 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.7 2.8E-16 2E-20 127.3 12.2 83 358-440 5-88 (93)
40 d1whwa_ d.58.7.1 (A:) Probable 99.7 3.4E-16 2.5E-20 128.5 12.9 84 358-441 6-90 (99)
41 d2cqba1 d.58.7.1 (A:1-89) Pept 99.7 1.3E-16 9.8E-21 128.2 10.2 82 359-440 4-86 (89)
42 d1no8a_ d.58.7.1 (A:) Nuclear 99.7 6.5E-17 4.8E-21 126.4 8.0 75 258-333 2-77 (78)
43 d2cq0a1 d.58.7.1 (A:231-320) E 99.7 2.1E-16 1.5E-20 127.3 11.2 83 358-440 6-89 (90)
44 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.7 1.5E-16 1.1E-20 128.8 10.3 82 359-440 8-90 (93)
45 d1cvja1 d.58.7.1 (A:11-90) Pol 99.7 1.8E-16 1.3E-20 124.6 9.9 76 362-437 2-78 (80)
46 d2cpza1 d.58.7.1 (A:383-484) C 99.7 2.5E-16 1.9E-20 129.9 11.2 84 358-441 16-100 (102)
47 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.7 2.4E-16 1.8E-20 124.8 10.6 77 549-635 5-82 (83)
48 d2ghpa3 d.58.7.1 (A:206-291) U 99.7 4.7E-17 3.4E-21 129.9 6.3 81 255-335 3-85 (86)
49 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.7 5.9E-17 4.3E-21 128.6 6.8 77 259-335 1-79 (83)
50 d2cpfa1 d.58.7.1 (A:362-446) P 99.6 1.4E-16 1E-20 127.1 8.2 75 259-333 1-79 (85)
51 d2cpha1 d.58.7.1 (A:454-547) P 99.6 3.4E-16 2.5E-20 127.0 10.6 83 358-440 6-91 (94)
52 d2cqca1 d.58.7.1 (A:109-191) A 99.6 4.4E-16 3.2E-20 123.4 11.0 76 358-433 7-83 (83)
53 d1zh5a2 d.58.7.1 (A:105-189) L 99.6 1.9E-16 1.4E-20 125.8 8.6 76 256-332 6-81 (85)
54 d2cq3a1 d.58.7.1 (A:110-202) R 99.6 1.4E-15 1E-19 123.2 13.0 82 358-440 9-90 (93)
55 d2u2fa_ d.58.7.1 (A:) Splicing 99.6 2.5E-16 1.8E-20 125.2 8.3 80 361-440 2-82 (85)
56 d2cqda1 d.58.7.1 (A:1-103) RNA 99.6 1.3E-15 9.4E-20 125.8 13.1 82 359-441 9-91 (103)
57 d2cq3a1 d.58.7.1 (A:110-202) R 99.6 5.1E-16 3.7E-20 125.8 10.3 80 254-335 9-89 (93)
58 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.6 4.3E-16 3.1E-20 128.0 9.5 82 254-335 6-94 (98)
59 d1cvja2 d.58.7.1 (A:91-179) Po 99.6 2.5E-16 1.8E-20 126.6 7.3 77 257-335 9-86 (89)
60 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.6 4.9E-16 3.5E-20 125.3 9.1 83 359-441 4-87 (90)
61 d1b7fa2 d.58.7.1 (A:205-289) S 99.6 8.6E-16 6.3E-20 122.2 10.4 78 359-436 5-85 (85)
62 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.6 1.6E-15 1.2E-19 122.0 12.0 82 358-440 6-87 (90)
63 d2ghpa1 d.58.7.1 (A:116-196) U 99.6 5E-16 3.6E-20 122.5 8.6 78 361-438 2-80 (81)
64 d2f9da1 d.58.7.1 (A:12-125) Pr 99.6 1.3E-15 9.6E-20 128.7 11.7 79 551-639 6-86 (114)
65 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.6 2.2E-15 1.6E-19 132.2 13.4 85 357-441 39-124 (139)
66 d2cpea1 d.58.7.1 (A:353-453) R 99.6 4.1E-16 3E-20 128.9 8.1 82 254-335 6-96 (101)
67 d2adca1 d.58.7.1 (A:335-443) P 99.6 6.3E-16 4.6E-20 129.7 9.2 77 552-637 2-78 (109)
68 d2cqga1 d.58.7.1 (A:96-185) TA 99.6 1.3E-15 9.3E-20 122.1 10.6 81 358-440 6-87 (90)
69 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.6 1E-15 7.3E-20 124.6 10.0 76 550-636 16-91 (96)
70 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.6 6.8E-16 4.9E-20 128.1 9.0 82 254-336 13-95 (104)
71 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.6 5.8E-16 4.2E-20 127.5 8.4 79 254-333 16-95 (101)
72 d1fxla2 d.58.7.1 (A:119-203) H 99.6 1.1E-15 7.9E-20 121.5 9.6 77 360-436 6-85 (85)
73 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.6 1.5E-15 1.1E-19 120.2 10.3 77 360-437 6-83 (84)
74 d1whxa_ d.58.7.1 (A:) Probable 99.6 8.6E-16 6.3E-20 129.3 9.4 80 551-641 9-88 (111)
75 d2cq4a1 d.58.7.1 (A:132-232) R 99.6 9.3E-16 6.8E-20 125.9 8.8 78 360-438 18-96 (101)
76 d1wf2a_ d.58.7.1 (A:) Heteroge 99.6 7.8E-16 5.7E-20 125.6 8.3 83 551-646 14-97 (98)
77 d2cpxa1 d.58.7.1 (A:291-392) R 99.6 2.3E-16 1.7E-20 130.6 5.1 83 253-335 15-98 (102)
78 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.6 1E-15 7.5E-20 121.3 8.7 78 363-440 1-80 (83)
79 d1cvja2 d.58.7.1 (A:91-179) Po 99.6 1.2E-15 8.9E-20 122.4 9.1 80 360-440 8-87 (89)
80 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.6 1E-16 7.6E-21 129.1 2.5 78 255-333 12-89 (91)
81 d2cpfa1 d.58.7.1 (A:362-446) P 99.6 2.1E-15 1.5E-19 120.1 9.6 77 363-439 1-81 (85)
82 d1nu4a_ d.58.7.1 (A:) Spliceso 99.6 1.8E-15 1.3E-19 122.0 9.2 81 551-637 2-84 (91)
83 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.6 1.5E-15 1.1E-19 118.9 8.5 75 551-638 4-78 (79)
84 d2ghpa3 d.58.7.1 (A:206-291) U 99.6 2.1E-15 1.5E-19 120.2 9.3 80 359-439 3-85 (86)
85 d1zh5a2 d.58.7.1 (A:105-189) L 99.6 3.6E-15 2.6E-19 118.3 10.7 78 360-438 6-83 (85)
86 d2ghpa2 d.58.7.1 (A:41-115) U4 99.6 1.5E-15 1.1E-19 117.3 8.2 74 257-332 1-74 (75)
87 d1wg5a_ d.58.7.1 (A:) Heteroge 99.6 2.1E-15 1.5E-19 125.0 9.6 82 255-336 14-95 (104)
88 d2adca2 d.58.7.1 (A:444-531) P 99.6 3.2E-15 2.3E-19 119.8 10.4 78 549-636 7-86 (88)
89 d2cpja1 d.58.7.1 (A:65-150) No 99.6 1.7E-15 1.2E-19 120.5 8.6 76 551-637 7-82 (86)
90 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.6 4E-15 2.9E-19 121.0 11.1 77 550-636 12-90 (95)
91 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.6 6.7E-15 4.9E-19 119.6 12.2 83 355-439 9-91 (95)
92 d1wg1a_ d.58.7.1 (A:) Probable 99.6 1.9E-15 1.4E-19 120.7 8.8 84 551-646 4-87 (88)
93 d1hd0a_ d.58.7.1 (A:) Heteroge 99.6 1.4E-15 1E-19 117.7 7.7 74 362-436 1-75 (75)
94 d2f9da1 d.58.7.1 (A:12-125) Pr 99.6 4E-15 2.9E-19 125.7 11.1 79 359-439 6-84 (114)
95 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.6 3.8E-16 2.8E-20 120.1 4.2 70 259-328 1-71 (72)
96 d1fjca_ d.58.7.1 (A:) Nucleoli 99.6 1.5E-15 1.1E-19 123.8 8.0 80 549-638 13-92 (96)
97 d1p1ta_ d.58.7.1 (A:) Cleavage 99.6 1E-15 7.6E-20 126.9 7.1 81 360-440 8-89 (104)
98 d2cpia1 d.58.7.1 (A:101-189) E 99.6 6.4E-16 4.6E-20 123.9 5.6 75 255-329 7-88 (89)
99 d1l3ka2 d.58.7.1 (A:103-181) N 99.6 6.6E-15 4.8E-19 115.4 11.2 76 360-436 2-78 (79)
100 d2cpda1 d.58.7.1 (A:223-308) A 99.6 3.3E-15 2.4E-19 119.1 9.6 77 551-638 7-83 (86)
101 d1x4ba1 d.58.7.1 (A:8-110) Het 99.6 3.4E-15 2.4E-19 122.8 9.9 80 360-440 20-100 (103)
102 d1uawa_ d.58.7.1 (A:) Musashi- 99.6 7.7E-16 5.6E-20 119.6 5.5 75 361-436 1-76 (77)
103 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.6 6.2E-15 4.5E-19 120.9 11.3 83 358-440 6-95 (98)
104 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.6 4E-16 2.9E-20 125.6 3.8 81 357-438 10-90 (91)
105 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.6 4.1E-15 3E-19 120.9 9.8 76 360-440 18-93 (96)
106 d2cpea1 d.58.7.1 (A:353-453) R 99.6 6.6E-15 4.8E-19 121.4 10.9 84 358-441 6-98 (101)
107 d2cpya1 d.58.7.1 (A:536-638) R 99.6 1.3E-15 9.1E-20 126.2 6.4 82 255-336 7-88 (103)
108 d1wela1 d.58.7.1 (A:412-523) R 99.6 1.4E-15 9.9E-20 127.8 6.7 84 253-336 15-98 (112)
109 d1weza_ d.58.7.1 (A:) Heteroge 99.6 3.3E-15 2.4E-19 123.1 8.5 80 254-335 13-92 (102)
110 d2cq1a1 d.58.7.1 (A:51-138) Po 99.6 7.5E-15 5.5E-19 117.5 10.4 79 549-638 5-85 (88)
111 d2msta_ d.58.7.1 (A:) Neural R 99.6 3E-15 2.2E-19 116.2 7.6 74 362-436 1-75 (75)
112 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.6 9E-15 6.5E-19 112.9 10.2 73 555-639 1-73 (75)
113 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.5 2.9E-15 2.1E-19 119.8 7.1 82 551-644 4-85 (88)
114 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.5 9E-15 6.6E-19 115.6 9.9 76 358-437 6-82 (83)
115 d1x0fa1 d.58.7.1 (A:183-257) N 99.5 1.8E-15 1.3E-19 116.7 5.5 74 362-436 1-75 (75)
116 d2disa1 d.58.7.1 (A:8-103) Hyp 99.5 4.1E-15 3E-19 121.2 8.0 81 256-336 1-86 (96)
117 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.5 4.7E-15 3.4E-19 122.0 8.3 80 358-437 16-95 (101)
118 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.5 2.5E-14 1.8E-18 118.5 12.8 83 357-441 12-96 (104)
119 d2cqpa1 d.58.7.1 (A:917-1002) 99.5 8.5E-15 6.2E-19 116.8 9.4 78 359-436 8-86 (86)
120 d1whya_ d.58.7.1 (A:) Putative 99.5 9.7E-15 7.1E-19 119.1 9.8 77 550-637 15-93 (97)
121 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.5 3E-15 2.2E-19 117.4 6.1 75 553-638 2-77 (80)
122 d1wexa_ d.58.7.1 (A:) Heteroge 99.5 2.4E-14 1.7E-18 118.4 11.8 81 549-640 12-94 (104)
123 d2cpja1 d.58.7.1 (A:65-150) No 99.5 8.6E-15 6.3E-19 116.3 8.7 76 360-440 8-83 (86)
124 d3begb1 d.58.7.1 (B:121-207) S 99.5 1.9E-15 1.4E-19 120.6 4.7 73 554-638 2-74 (87)
125 d1wg4a_ d.58.7.1 (A:) Splicing 99.5 1.1E-14 8.1E-19 118.7 9.4 77 551-639 14-90 (98)
126 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.5 2.1E-15 1.5E-19 120.7 4.8 77 254-336 3-79 (88)
127 d2cqpa1 d.58.7.1 (A:917-1002) 99.5 3.9E-15 2.9E-19 118.7 6.4 76 256-331 9-85 (86)
128 d2cpda1 d.58.7.1 (A:223-308) A 99.5 1.9E-14 1.4E-18 114.6 10.1 77 359-440 7-83 (86)
129 d1wexa_ d.58.7.1 (A:) Heteroge 99.5 5E-14 3.6E-18 116.4 12.9 81 356-441 11-93 (104)
130 d1weza_ d.58.7.1 (A:) Heteroge 99.5 1.5E-14 1.1E-18 119.1 9.6 83 356-440 11-93 (102)
131 d2cpxa1 d.58.7.1 (A:291-392) R 99.5 2.2E-15 1.6E-19 124.5 4.5 83 358-440 16-99 (102)
132 d1wg5a_ d.58.7.1 (A:) Heteroge 99.5 4E-14 2.9E-18 117.1 11.9 84 356-440 11-95 (104)
133 d2adba1 d.58.7.1 (A:177-284) P 99.5 1.6E-14 1.2E-18 120.4 9.2 79 551-639 6-87 (108)
134 d1weya_ d.58.7.1 (A:) Calcipre 99.5 8.9E-15 6.5E-19 120.4 7.5 83 551-639 4-86 (104)
135 d3begb1 d.58.7.1 (B:121-207) S 99.5 3.6E-15 2.6E-19 119.0 5.0 72 257-335 1-73 (87)
136 d1wf2a_ d.58.7.1 (A:) Heteroge 99.5 4.2E-14 3E-18 115.2 11.4 76 358-440 13-89 (98)
137 d1fjca_ d.58.7.1 (A:) Nucleoli 99.5 2.2E-14 1.6E-18 116.8 9.4 80 358-441 14-93 (96)
138 d2cpia1 d.58.7.1 (A:101-189) E 99.5 2.4E-14 1.8E-18 114.5 9.2 76 359-434 7-89 (89)
139 d1nu4a_ d.58.7.1 (A:) Spliceso 99.5 1.3E-14 9.5E-19 116.8 7.7 80 359-440 2-85 (91)
140 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.5 6.3E-15 4.6E-19 115.4 5.6 75 361-440 2-77 (80)
141 d1whxa_ d.58.7.1 (A:) Probable 99.5 2.4E-14 1.7E-18 120.3 9.5 76 360-440 10-85 (111)
142 d1x4da1 d.58.7.1 (A:8-96) Matr 99.5 3.2E-14 2.4E-18 113.6 9.7 77 549-636 5-84 (89)
143 d1whya_ d.58.7.1 (A:) Putative 99.5 4.8E-14 3.5E-18 114.9 10.9 79 357-440 14-94 (97)
144 d2cq1a1 d.58.7.1 (A:51-138) Po 99.5 6.9E-14 5E-18 111.8 11.5 79 357-440 5-85 (88)
145 d1wg1a_ d.58.7.1 (A:) Probable 99.5 3.5E-14 2.6E-18 113.3 9.7 76 359-440 4-79 (88)
146 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.5 2.3E-14 1.7E-18 112.0 8.3 75 358-439 3-77 (79)
147 d2adca2 d.58.7.1 (A:444-531) P 99.5 2.6E-14 1.9E-18 114.3 8.6 78 358-438 8-86 (88)
148 d2ghpa2 d.58.7.1 (A:41-115) U4 99.5 4.2E-14 3.1E-18 109.0 9.4 74 361-436 1-74 (75)
149 d1wg4a_ d.58.7.1 (A:) Splicing 99.5 6.3E-14 4.6E-18 114.1 10.9 79 357-441 12-90 (98)
150 d1u2fa_ d.58.7.1 (A:) Splicing 99.5 1.4E-15 1E-19 122.4 0.9 76 256-331 1-81 (90)
151 d2adca1 d.58.7.1 (A:335-443) P 99.5 3.9E-14 2.8E-18 118.5 9.5 77 360-440 2-79 (109)
152 d2disa1 d.58.7.1 (A:8-103) Hyp 99.5 3.1E-14 2.2E-18 115.9 8.6 81 361-441 2-87 (96)
153 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.5 3.1E-14 2.3E-18 116.2 8.5 78 549-637 15-95 (99)
154 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.5 1.1E-14 7.9E-19 111.8 4.9 70 363-432 1-71 (72)
155 d2cpya1 d.58.7.1 (A:536-638) R 99.5 4.2E-14 3E-18 116.8 8.7 79 359-438 7-86 (103)
156 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.5 1.2E-13 8.4E-18 106.5 10.0 72 363-440 1-72 (75)
157 d2adba1 d.58.7.1 (A:177-284) P 99.5 5.5E-14 4E-18 117.1 8.5 81 358-441 5-87 (108)
158 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.4 1.9E-13 1.4E-17 111.5 9.2 79 357-440 15-96 (99)
159 d1x4da1 d.58.7.1 (A:8-96) Matr 99.4 3.6E-13 2.6E-17 107.4 10.0 78 358-440 6-86 (89)
160 d1wela1 d.58.7.1 (A:412-523) R 99.4 8E-14 5.8E-18 116.7 6.3 81 358-439 16-97 (112)
161 d1jmta_ d.58.7.3 (A:) d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95 E-value=9e-28 Score=224.41 Aligned_cols=171 Identities=21% Similarity=0.411 Sum_probs=151.1
Q ss_pred CCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHHhcCCccCCceEEEccCcch
Q 006398 256 QRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAE 335 (647)
Q Consensus 256 ~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~~~g~~~~g~~i~v~~~~~~ 335 (647)
.++|||+|||+.+|+++|.++|++||.|.++.++.+..+|.++|||||+|.+.++|..|+.+++..+.+..+.+......
T Consensus 6 ~r~lfV~nLp~~~te~~L~~~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~ 85 (183)
T d1u1qa_ 6 LRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSR 85 (183)
T ss_dssp HHEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTCSCEETTEECEEEECCCT
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHHhcCCcccccchhhhhhhhc
Confidence 37999999999999999999999999999999999999999999999999999999999998888899988888765433
Q ss_pred hhhcccccccCCCCCCCCCCCCCCCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHH
Q 006398 336 KNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDA 414 (647)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A 414 (647)
...... ......++|||+|||+.+++++|.++|..||.|..+.|+.+ .+|.++|||||+|.+.++|
T Consensus 86 ~~~~~~-------------~~~~~~~~i~V~~lp~~~te~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A 152 (183)
T d1u1qa_ 86 EDSQRP-------------GAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSV 152 (183)
T ss_dssp TGGGST-------------TTTCCCSEEEEECCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESCHHHH
T ss_pred cccccc-------------ccccccceeEEccCCCcCCHHHHhhhhccCCceeeeeeecccccCccceeEEEEECCHHHH
Confidence 332211 12244689999999999999999999999999999999987 5789999999999999999
Q ss_pred HHHHHHcCCceecCeEEEEEEeecCC
Q 006398 415 RNALNLNGQLEIVGRAIKVSAVTDQS 440 (647)
Q Consensus 415 ~~Al~~l~g~~~~g~~i~v~~~~~~~ 440 (647)
.+||+ +++..|+|+.|.|.+|.++.
T Consensus 153 ~~Al~-~~~~~~~G~~i~V~~A~~k~ 177 (183)
T d1u1qa_ 153 DKIVI-QKYHTVNGHNCEVRKALSKQ 177 (183)
T ss_dssp HHHHT-SSCEEETTEEEEEEECCCHH
T ss_pred HHHHH-hCCCeECCEEEEEEecCCcc
Confidence 99997 67889999999999986643
No 2
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91 E-value=1.1e-23 Score=196.18 Aligned_cols=166 Identities=21% Similarity=0.399 Sum_probs=138.1
Q ss_pred CcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEeec
Q 006398 360 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTD 438 (647)
Q Consensus 360 ~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~~ 438 (647)
.++|||+|||+.+++++|.++|++||.|..+.++.+ .++.++|||||+|.+.++|.+|+..++ ..++++.+.+.....
T Consensus 6 ~r~lfV~nLp~~~te~~L~~~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~-~~~~~~~~~~~~~~~ 84 (183)
T d1u1qa_ 6 LRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARP-HKVDGRVVEPKRAVS 84 (183)
T ss_dssp HHEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTCS-CEETTEECEEEECCC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHHhcC-Ccccccchhhhhhhh
Confidence 478999999999999999999999999999999887 588999999999999999999998654 567788777776433
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCccCChHHHHHHHHHhccCCCCcccCCCCCCCcccCCCCCCCCcccccccccccccCCC
Q 006398 439 QSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPP 518 (647)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (647)
......
T Consensus 85 ~~~~~~-------------------------------------------------------------------------- 90 (183)
T d1u1qa_ 85 REDSQR-------------------------------------------------------------------------- 90 (183)
T ss_dssp TTGGGS--------------------------------------------------------------------------
T ss_pred cccccc--------------------------------------------------------------------------
Confidence 221000
Q ss_pred CCCCCCCCCCCCCCccccCCCCCcCccCCCCCCcceEEeccCCCCCCCCchhhhhhHHHHHHHHhhhcCCeEEEEEeeC-
Q 006398 519 LVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD- 597 (647)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~- 597 (647)
.......++|||.|| |..++ +++|.++|+.||.|..+.|..+
T Consensus 91 ---------------------------~~~~~~~~~i~V~~l--p~~~t--------e~~L~~~f~~~G~v~~~~i~~~~ 133 (183)
T d1u1qa_ 91 ---------------------------PGAHLTVKKIFVGGI--KEDTE--------EHHLRDYFEQYGKIEVIEIMTDR 133 (183)
T ss_dssp ---------------------------TTTTCCCSEEEEECC--CTTCC--------HHHHHHHHGGGSCEEEEEEEECT
T ss_pred ---------------------------cccccccceeEEccC--CCcCC--------HHHHhhhhccCCceeeeeeeccc
Confidence 000124458999999 77777 7999999999999999988653
Q ss_pred ----CCccEEEEeCChHHHHHHHHHHcCceeCCeEEEEEEeCchh
Q 006398 598 ----SAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQT 638 (647)
Q Consensus 598 ----~~G~afV~F~~~e~A~~A~~~lnG~~~~gr~i~v~~~~~~~ 638 (647)
++|+|||+|.+.++|.+|+. |+|..|+|++|.|.+|.+..
T Consensus 134 ~~~~~~g~~fV~f~~~e~A~~Al~-~~~~~~~G~~i~V~~A~~k~ 177 (183)
T d1u1qa_ 134 GSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKALSKQ 177 (183)
T ss_dssp TTCCEEEEEEEEESCHHHHHHHHT-SSCEEETTEEEEEEECCCHH
T ss_pred ccCccceeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEecCCcc
Confidence 46899999999999999997 79999999999999986543
No 3
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=2.8e-19 Score=148.34 Aligned_cols=94 Identities=32% Similarity=0.554 Sum_probs=87.7
Q ss_pred CCCcceEEeccCCCCCCCCchhhhhhHHHHHHHHhhhcCCeEEEEEeeC-------CCccEEEEeCChHHHHHHHHHHcC
Q 006398 549 GVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD-------SAGFVYLRFENTQSAFAAQRALHG 621 (647)
Q Consensus 549 ~~~~~~l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~-------~~G~afV~F~~~e~A~~A~~~lnG 621 (647)
|+|+++|+|.||++|.++.++.+|++|.+||+.+|++||.|..|.|+++ ..|+|||+|.++++|..|+..|||
T Consensus 1 g~Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~G 80 (104)
T d1o0pa_ 1 GHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTG 80 (104)
T ss_dssp CCCCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSS
T ss_pred CCCCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCC
Confidence 5689999999999999999999999999999999999999999999653 358999999999999999999999
Q ss_pred ceeCCeEEEEEEeCchhhhcc
Q 006398 622 RWFAGKMITATFMVPQTYEAK 642 (647)
Q Consensus 622 ~~~~gr~i~v~~~~~~~~~~~ 642 (647)
+.|+|++|.|.|++++.|.+.
T Consensus 81 r~f~gR~v~v~f~~~~~y~~~ 101 (104)
T d1o0pa_ 81 RKFANRVVVTKYCDPDSYHRR 101 (104)
T ss_dssp CCSSSSCCEEEEECHHHHHHT
T ss_pred CEECCeEEEEEEcCHHHhhhc
Confidence 999999999999999998753
No 4
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=1.2e-18 Score=143.46 Aligned_cols=82 Identities=60% Similarity=0.972 Sum_probs=77.5
Q ss_pred CCCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHHhcCCccCCceEEEccCcc
Q 006398 255 DQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEA 334 (647)
Q Consensus 255 ~~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~~~g~~~~g~~i~v~~~~~ 334 (647)
..++|||+|||+.+|+++|+++|+.||.|.+|.|+.+..||.++|||||+|.+.++|.+||+|||..|.|+.|.|+++.+
T Consensus 17 ~~~tifV~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~l~g~~~~G~~l~V~~a~~ 96 (101)
T d2cq4a1 17 DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQA 96 (101)
T ss_dssp HHTEEEEESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHHHTTEEETTEEEEEEEHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHHHCCCEECCEEEEEEECCC
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999998755
Q ss_pred hh
Q 006398 335 EK 336 (647)
Q Consensus 335 ~~ 336 (647)
..
T Consensus 97 ~~ 98 (101)
T d2cq4a1 97 EK 98 (101)
T ss_dssp HH
T ss_pred CC
Confidence 43
No 5
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.73 E-value=1.4e-18 Score=135.36 Aligned_cols=76 Identities=24% Similarity=0.419 Sum_probs=73.5
Q ss_pred CeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHHhcCCccCCceEEEccC
Q 006398 257 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPS 332 (647)
Q Consensus 257 ~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~~~g~~~~g~~i~v~~~ 332 (647)
++|||+|||+.+|+++|+++|++||.|..+.|+.++.||.++|||||+|.+.++|.+||++++..|.|+.|.|+.|
T Consensus 1 cklfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVA 76 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHHTTTCCCSSCCCEEEEC
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHHcCCCEECCeEEEEEEC
Confidence 5799999999999999999999999999999999999999999999999999999999999999999999999765
No 6
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=5.3e-18 Score=134.66 Aligned_cols=77 Identities=23% Similarity=0.409 Sum_probs=74.3
Q ss_pred CCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHHhcCCccCCceEEEccC
Q 006398 256 QRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPS 332 (647)
Q Consensus 256 ~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~~~g~~~~g~~i~v~~~ 332 (647)
.++|||+|||+++|+++|.++|++||.|..|.|+.+..||.++|||||+|.+.++|.+||++++..|.|+.|.|+.|
T Consensus 6 ~~~lfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~~~~~~i~Gr~i~V~~A 82 (84)
T d1l3ka1 6 LRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRA 82 (84)
T ss_dssp GGEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTCSCEETTEECEEEEC
T ss_pred CcEEEEECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHHhCCCEECCEEEEEEee
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999776
No 7
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=4.6e-18 Score=131.94 Aligned_cols=75 Identities=27% Similarity=0.437 Sum_probs=72.2
Q ss_pred eEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHHhcCCccCCceEEEccC
Q 006398 258 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPS 332 (647)
Q Consensus 258 ~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~~~g~~~~g~~i~v~~~ 332 (647)
+|||+|||+++|+++|.++|++||.|..|.|+.++.||.++|||||+|.+.++|..||++++..|.|+.|.|+.|
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 75 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHHTCCCCBTTBCCEECCC
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHhcCCCEECCCEEEeeEC
Confidence 489999999999999999999999999999999999999999999999999999999999999999999999754
No 8
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.72 E-value=5.1e-18 Score=134.62 Aligned_cols=79 Identities=20% Similarity=0.371 Sum_probs=75.4
Q ss_pred CCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHH-hcCCccCCceEEEccCcc
Q 006398 256 QRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSEA 334 (647)
Q Consensus 256 ~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~-~~g~~~~g~~i~v~~~~~ 334 (647)
+.+|||+|||+.+|+++|+++|++||.|..|.|+.++.+|.++|||||+|.+.++|..||. |||..|.|+.|.|.++.+
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~p 81 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP 81 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 3689999999999999999999999999999999999999999999999999999999996 999999999999998753
No 9
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=8.3e-18 Score=136.44 Aligned_cols=80 Identities=29% Similarity=0.439 Sum_probs=76.4
Q ss_pred CCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHH-hcCCccCCceEEEccCcc
Q 006398 256 QRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSEA 334 (647)
Q Consensus 256 ~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~-~~g~~~~g~~i~v~~~~~ 334 (647)
.++|||+|||+.+|+++|+++|++||.|..|.|+.++.||.++|||||+|.+.++|..||+ |||..|.|+.|.|.++.+
T Consensus 9 ~~tlfV~nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~A~~ 88 (93)
T d1x5ua1 9 DATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKASA 88 (93)
T ss_dssp TTEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEETTT
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcCC
Confidence 4799999999999999999999999999999999999999999999999999999999996 999999999999998865
Q ss_pred h
Q 006398 335 E 335 (647)
Q Consensus 335 ~ 335 (647)
.
T Consensus 89 ~ 89 (93)
T d1x5ua1 89 H 89 (93)
T ss_dssp T
T ss_pred C
Confidence 4
No 10
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=6.6e-18 Score=134.54 Aligned_cols=78 Identities=23% Similarity=0.369 Sum_probs=75.1
Q ss_pred CeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHH-hcCCccCCceEEEccCcc
Q 006398 257 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSEA 334 (647)
Q Consensus 257 ~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~-~~g~~~~g~~i~v~~~~~ 334 (647)
.+|||+|||+.+|+++|.++|++||+|..|.|+.++.||.++|||||+|.++++|..|+. |+|..|.|+.|.|.++..
T Consensus 2 ~rlfV~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~ 80 (85)
T d2u2fa_ 2 HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASV 80 (85)
T ss_dssp CCEEEETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 579999999999999999999999999999999999999999999999999999999998 999999999999998854
No 11
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.71 E-value=1e-17 Score=134.43 Aligned_cols=80 Identities=26% Similarity=0.385 Sum_probs=76.0
Q ss_pred CCCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHH-hcCCccCCceEEEccCc
Q 006398 255 DQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSE 333 (647)
Q Consensus 255 ~~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~-~~g~~~~g~~i~v~~~~ 333 (647)
..++|||+|||+.+|+++|.++|++||.|..|.|+.++.+|.++|||||+|.+.++|..||. |||..|.|+.|.|.++.
T Consensus 6 ~~~~l~V~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~~a~ 85 (88)
T d1rk8a_ 6 EGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDWCF 85 (88)
T ss_dssp -CEEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEESE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEEEec
Confidence 45799999999999999999999999999999999999999999999999999999999997 99999999999999885
Q ss_pred c
Q 006398 334 A 334 (647)
Q Consensus 334 ~ 334 (647)
+
T Consensus 86 ~ 86 (88)
T d1rk8a_ 86 V 86 (88)
T ss_dssp E
T ss_pred C
Confidence 4
No 12
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=1.1e-17 Score=135.80 Aligned_cols=80 Identities=19% Similarity=0.426 Sum_probs=76.4
Q ss_pred CCCCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHH-hcCCccCCceEEEccC
Q 006398 254 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPS 332 (647)
Q Consensus 254 ~~~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~-~~g~~~~g~~i~v~~~ 332 (647)
..+++|||+|||+++|+++|+++|++||.|.+|.|+.++.+|.++|||||+|.+.++|..||+ |||..|.|++|.|.++
T Consensus 5 ~~s~tlfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~a 84 (93)
T d1h2vz_ 5 KKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWD 84 (93)
T ss_dssp TTCCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 456899999999999999999999999999999999999999999999999999999999997 9999999999999886
Q ss_pred c
Q 006398 333 E 333 (647)
Q Consensus 333 ~ 333 (647)
.
T Consensus 85 ~ 85 (93)
T d1h2vz_ 85 A 85 (93)
T ss_dssp S
T ss_pred C
Confidence 4
No 13
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=9.2e-18 Score=132.16 Aligned_cols=76 Identities=28% Similarity=0.407 Sum_probs=73.5
Q ss_pred eEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHH-hcCCccCCceEEEccCc
Q 006398 258 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSE 333 (647)
Q Consensus 258 ~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~-~~g~~~~g~~i~v~~~~ 333 (647)
.|||+|||+.+|+++|.++|++||+|.+|.|+.++.||.++|||||+|.++++|..||+ |+|..|.|++|.|.++.
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~ 78 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQ 78 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 59999999999999999999999999999999999999999999999999999999996 99999999999998874
No 14
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.71 E-value=1.3e-17 Score=137.21 Aligned_cols=84 Identities=24% Similarity=0.398 Sum_probs=78.4
Q ss_pred CCCCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHH-hcCCccCCceEEEccC
Q 006398 254 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPS 332 (647)
Q Consensus 254 ~~~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~-~~g~~~~g~~i~v~~~ 332 (647)
..+.+|||+|||+.+|+++|+++|.+||.|..|.|+.++.+|.++|||||+|.+.++|..||+ ||+..|.|+.|.|.++
T Consensus 6 ~~~~~lfV~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~a 85 (99)
T d1whwa_ 6 SGSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPS 85 (99)
T ss_dssp CSCEEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEEC
T ss_pred CCCCEEEEECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 345789999999999999999999999999999999999999999999999999999999997 9999999999999988
Q ss_pred cchhh
Q 006398 333 EAEKN 337 (647)
Q Consensus 333 ~~~~~ 337 (647)
.....
T Consensus 86 ~~~~~ 90 (99)
T d1whwa_ 86 TIKKE 90 (99)
T ss_dssp CCCST
T ss_pred CCCCc
Confidence 76543
No 15
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=6.4e-18 Score=130.64 Aligned_cols=75 Identities=17% Similarity=0.310 Sum_probs=71.8
Q ss_pred eEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHHhcCCccCCceEEEccC
Q 006398 258 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPS 332 (647)
Q Consensus 258 ~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~~~g~~~~g~~i~v~~~ 332 (647)
+|||||||+++|+++|+++|++||.|..|.|+.++.||.++|||||+|.+.++|.+||++++..|.|+.|.|+.|
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~~~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 75 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTTCSSCCBTTBCCEEECC
T ss_pred CEEEcCCCCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHhhCCCEECCEEeEEEEC
Confidence 599999999999999999999999999999999999999999999999999999999998889999999998754
No 16
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=1.9e-17 Score=132.95 Aligned_cols=81 Identities=22% Similarity=0.327 Sum_probs=74.5
Q ss_pred CCCCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHHhcCCccCCceEEEccCc
Q 006398 254 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSE 333 (647)
Q Consensus 254 ~~~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~~~g~~~~g~~i~v~~~~ 333 (647)
....+|||+|||+++|+++|+++|++||.|..|.|+.++.||.++|||||+|.+.++|.+||+ +...|.|+.|.|+++.
T Consensus 6 ~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~-~~~~l~Gr~i~v~~a~ 84 (90)
T d2cqga1 6 QKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMS-QRHMIDGRWCDCKLPN 84 (90)
T ss_dssp CCCCCEEEESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHH-SCEEETTEEEEEECCC
T ss_pred cCCCeEEEECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHh-cCCccCCEEeEEEeCC
Confidence 345789999999999999999999999999999999999999999999999999999999998 3447999999999876
Q ss_pred ch
Q 006398 334 AE 335 (647)
Q Consensus 334 ~~ 335 (647)
+.
T Consensus 85 ~k 86 (90)
T d2cqga1 85 SK 86 (90)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 17
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=1.1e-17 Score=134.85 Aligned_cols=81 Identities=23% Similarity=0.310 Sum_probs=76.7
Q ss_pred CCCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHH-hcCCccCCceEEEccCc
Q 006398 255 DQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSE 333 (647)
Q Consensus 255 ~~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~-~~g~~~~g~~i~v~~~~ 333 (647)
+..+|||+|||+.+|+++|.++|.+||.|..|.|+.+..+|.++|||||+|.+.++|..||+ |+|..|.|+.|.|.++.
T Consensus 7 ~~~~i~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~~ak 86 (90)
T d2cq0a1 7 DNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWAK 86 (90)
T ss_dssp SSEEEEEESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEEESS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEEeee
Confidence 45799999999999999999999999999999999999999999999999999999999997 99999999999999886
Q ss_pred ch
Q 006398 334 AE 335 (647)
Q Consensus 334 ~~ 335 (647)
+.
T Consensus 87 p~ 88 (90)
T d2cq0a1 87 PS 88 (90)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 18
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=6.9e-18 Score=135.86 Aligned_cols=80 Identities=19% Similarity=0.403 Sum_probs=76.2
Q ss_pred CCCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHH-hcCCccCCceEEEccCc
Q 006398 255 DQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSE 333 (647)
Q Consensus 255 ~~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~-~~g~~~~g~~i~v~~~~ 333 (647)
..++|||+|||+.+|+++|+++|++||.|..|.|+.++.+|.++|||||+|.+.++|..|++ |||..|.|+.|.|.++.
T Consensus 4 ~~~tlfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a~ 83 (89)
T d2cqba1 4 TKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAK 83 (89)
T ss_dssp CCSCEEEESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred CCcEEEEeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 34799999999999999999999999999999999999999999999999999999999996 99999999999999885
Q ss_pred c
Q 006398 334 A 334 (647)
Q Consensus 334 ~ 334 (647)
+
T Consensus 84 p 84 (89)
T d2cqba1 84 P 84 (89)
T ss_dssp C
T ss_pred C
Confidence 4
No 19
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=2e-17 Score=130.09 Aligned_cols=76 Identities=22% Similarity=0.417 Sum_probs=73.6
Q ss_pred CeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHHhcCCccCCceEEEccC
Q 006398 257 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPS 332 (647)
Q Consensus 257 ~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~~~g~~~~g~~i~v~~~ 332 (647)
++|||+|||+.+|+++|+++|++||.|..+.++.++.++.++|||||+|.+.++|.+|++++|..|.|+.|.|+.|
T Consensus 3 r~lfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 3 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 78 (79)
T ss_dssp SEEEEECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHCSCCEETTEECEEEEC
T ss_pred CEEEECCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHHHhCCCEECCEEEEEEEC
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999999765
No 20
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=2.2e-17 Score=131.09 Aligned_cols=75 Identities=32% Similarity=0.491 Sum_probs=72.1
Q ss_pred CCCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHH-hcCCccCCceEEE
Q 006398 255 DQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMV 329 (647)
Q Consensus 255 ~~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~-~~g~~~~g~~i~v 329 (647)
+.++|||+|||+.+|+++|+++|++||.|..|.|+.++.+|.++|||||+|.+.++|..||. |||..|.|+.|.|
T Consensus 8 ~~~~l~V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 8 PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp GGGCEEEESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 45799999999999999999999999999999999999999999999999999999999996 9999999999987
No 21
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=1.3e-17 Score=137.51 Aligned_cols=80 Identities=26% Similarity=0.441 Sum_probs=76.2
Q ss_pred CCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHHhcCCccCCceEEEccCcch
Q 006398 256 QRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAE 335 (647)
Q Consensus 256 ~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~~~g~~~~g~~i~v~~~~~~ 335 (647)
.++|||+|||+++|+++|+++|.+||.|..+.|+.++.++.++|||||+|.+.++|.+||++++..|.|+.|.|.++.+.
T Consensus 20 ~~~lfVgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~~~~~~l~G~~i~V~~a~~k 99 (103)
T d1x4ba1 20 FRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAR 99 (103)
T ss_dssp HTEEEEECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHTSCSEEETTEEEEEECCSSC
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHHHhCCCeECCEEEEEEECccc
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999887643
No 22
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=3.2e-17 Score=129.98 Aligned_cols=78 Identities=19% Similarity=0.363 Sum_probs=74.5
Q ss_pred CeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHH-hcCCccCCceEEEccCcc
Q 006398 257 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSEA 334 (647)
Q Consensus 257 ~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~-~~g~~~~g~~i~v~~~~~ 334 (647)
.+|||+|||+.+|+++|+++|++||.|..|.++.+..+|..+|||||+|.+.++|..|+. |||..|.|+.|.|.++.+
T Consensus 3 t~l~V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~AkP 81 (82)
T d1fxla1 3 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 81 (82)
T ss_dssp SEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 579999999999999999999999999999999999999999999999999999999996 999999999999988753
No 23
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=3.6e-17 Score=130.26 Aligned_cols=77 Identities=25% Similarity=0.496 Sum_probs=72.2
Q ss_pred CCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHH-hcCCccCC--ceEEEccC
Q 006398 256 QRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLG--QPVMVKPS 332 (647)
Q Consensus 256 ~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~-~~g~~~~g--~~i~v~~~ 332 (647)
..+|||+|||+.+|+++|+++|++||.|..|.|+.++.+|.++|||||+|.+.++|..|++ |||..+.| .+|.|.+|
T Consensus 6 ~~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~~A 85 (85)
T d1fxla2 6 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFA 85 (85)
T ss_dssp TCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEEC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEEeC
Confidence 4689999999999999999999999999999999999999999999999999999999997 99999998 55888764
No 24
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=3.6e-17 Score=135.11 Aligned_cols=82 Identities=20% Similarity=0.398 Sum_probs=77.1
Q ss_pred CCCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHH-hcCCccCCceEEEccCc
Q 006398 255 DQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSE 333 (647)
Q Consensus 255 ~~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~-~~g~~~~g~~i~v~~~~ 333 (647)
+..+|||+|||+.+|+++|.++|..||.|..+.++.+..+|.++|||||+|.+.++|..||. |||..|.|+.|.|.++.
T Consensus 17 ~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~~a~ 96 (102)
T d2cpza1 17 EGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKR 96 (102)
T ss_dssp TTCCEEEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEECCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEEEeC
Confidence 45789999999999999999999999999999999999999999999999999999999996 99999999999999886
Q ss_pred chh
Q 006398 334 AEK 336 (647)
Q Consensus 334 ~~~ 336 (647)
+..
T Consensus 97 ~k~ 99 (102)
T d2cpza1 97 SKN 99 (102)
T ss_dssp CSC
T ss_pred CCC
Confidence 543
No 25
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=1.7e-17 Score=137.92 Aligned_cols=82 Identities=33% Similarity=0.551 Sum_probs=77.3
Q ss_pred CCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHH-hcCCccCCceEEEccCcc
Q 006398 256 QRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSEA 334 (647)
Q Consensus 256 ~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~-~~g~~~~g~~i~v~~~~~ 334 (647)
.++|||+|||+.+|+++|.++|++||.|..|.|+.++.||.++|||||+|.+.++|..||+ |+|..|.|+.|.|.++..
T Consensus 8 ~rtl~V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a~~ 87 (104)
T d1p1ta_ 8 LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAAS 87 (104)
T ss_dssp HSCEEEESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEETTC
T ss_pred CCEEEEECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCC
Confidence 4789999999999999999999999999999999999999999999999999999999996 999999999999999865
Q ss_pred hhh
Q 006398 335 EKN 337 (647)
Q Consensus 335 ~~~ 337 (647)
...
T Consensus 88 ~~~ 90 (104)
T d1p1ta_ 88 EKN 90 (104)
T ss_dssp TTH
T ss_pred CCC
Confidence 443
No 26
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=2.2e-17 Score=133.40 Aligned_cols=81 Identities=23% Similarity=0.527 Sum_probs=76.4
Q ss_pred CCCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHH-hcCCccCCceEEEccCc
Q 006398 255 DQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSE 333 (647)
Q Consensus 255 ~~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~-~~g~~~~g~~i~v~~~~ 333 (647)
..++|||+|||+.+|+++|.++|.+||.|..+.++.+..+|.++|||||+|.+.++|..||. |+|..|.|+.|.|.++.
T Consensus 4 ~~~kifV~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a~ 83 (90)
T d1x5sa1 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAG 83 (90)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEEE
T ss_pred CCCEEEEECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcC
Confidence 45789999999999999999999999999999999999999999999999999999999996 99999999999998875
Q ss_pred ch
Q 006398 334 AE 335 (647)
Q Consensus 334 ~~ 335 (647)
+.
T Consensus 84 ~~ 85 (90)
T d1x5sa1 84 KS 85 (90)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 27
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.68 E-value=5.5e-17 Score=129.32 Aligned_cols=78 Identities=18% Similarity=0.355 Sum_probs=73.1
Q ss_pred CCCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHH-hcCCccCC--ceEEEcc
Q 006398 255 DQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLG--QPVMVKP 331 (647)
Q Consensus 255 ~~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~-~~g~~~~g--~~i~v~~ 331 (647)
...+|||+|||+.+++++|+++|++||.|..|.++.++.+|.++|||||+|.+.++|..||+ |||..+.| ++|.|++
T Consensus 5 ~~t~lfV~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V~~ 84 (85)
T d1b7fa2 5 KDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRL 84 (85)
T ss_dssp TTCEEEEESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEEEE
Confidence 34689999999999999999999999999999999999999999999999999999999997 99999876 8899986
Q ss_pred C
Q 006398 332 S 332 (647)
Q Consensus 332 ~ 332 (647)
|
T Consensus 85 A 85 (85)
T d1b7fa2 85 A 85 (85)
T ss_dssp C
T ss_pred C
Confidence 5
No 28
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.68 E-value=9.2e-17 Score=141.12 Aligned_cols=82 Identities=29% Similarity=0.477 Sum_probs=77.2
Q ss_pred CCCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHH-hcCCccCCceEEEccCc
Q 006398 255 DQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSE 333 (647)
Q Consensus 255 ~~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~-~~g~~~~g~~i~v~~~~ 333 (647)
..++|||+|||+++|+++|+++|++||.|..|.|+.++.||.++|||||+|.+.++|..||+ |||..|.|+.|.|.++.
T Consensus 41 ~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~a~ 120 (139)
T d1u6fa1 41 VLRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVALAA 120 (139)
T ss_dssp TTSEEEEESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEESS
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 45789999999999999999999999999999999999999999999999999999999997 99999999999999886
Q ss_pred chh
Q 006398 334 AEK 336 (647)
Q Consensus 334 ~~~ 336 (647)
...
T Consensus 121 ~~~ 123 (139)
T d1u6fa1 121 SGH 123 (139)
T ss_dssp CCC
T ss_pred CCC
Confidence 443
No 29
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.68 E-value=1.1e-16 Score=128.20 Aligned_cols=81 Identities=27% Similarity=0.462 Sum_probs=76.3
Q ss_pred CCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEee
Q 006398 359 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVT 437 (647)
Q Consensus 359 ~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~ 437 (647)
...+|||+|||..+++++|.++|++||.|..|.|+.+ .+|.++|||||+|.+.++|..|+..|||..|.|+.|.|.||.
T Consensus 6 ~~~~l~V~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~~a~ 85 (88)
T d1rk8a_ 6 EGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDWCF 85 (88)
T ss_dssp -CEEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEESE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEEEec
Confidence 4689999999999999999999999999999999988 589999999999999999999999999999999999999987
Q ss_pred cC
Q 006398 438 DQ 439 (647)
Q Consensus 438 ~~ 439 (647)
.+
T Consensus 86 ~k 87 (88)
T d1rk8a_ 86 VK 87 (88)
T ss_dssp EC
T ss_pred CC
Confidence 64
No 30
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.67 E-value=5.7e-17 Score=131.70 Aligned_cols=82 Identities=23% Similarity=0.461 Sum_probs=75.4
Q ss_pred CCCCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCC-CCCcccEEEEEecccccHHHHHH-h-cCCccCCceEEEc
Q 006398 254 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRN-SRRSKGVGYVEFYDVMSVPMAIA-L-SGQPLLGQPVMVK 330 (647)
Q Consensus 254 ~~~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~-tg~~~g~afV~f~~~~~a~~al~-~-~g~~~~g~~i~v~ 330 (647)
....+|||+|||+.+++++|.++|.+||.|..|.|+.+.. +|.++|||||+|.+.++|..||. | ||..|.|++|.|.
T Consensus 6 ~~~~~l~V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V~ 85 (94)
T d2cpha1 6 QTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLE 85 (94)
T ss_dssp SCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEEEE
Confidence 3557899999999999999999999999999999998864 89999999999999999999996 7 8999999999999
Q ss_pred cCcch
Q 006398 331 PSEAE 335 (647)
Q Consensus 331 ~~~~~ 335 (647)
++...
T Consensus 86 ~A~~~ 90 (94)
T d2cpha1 86 WADSE 90 (94)
T ss_dssp ECCCC
T ss_pred EcCCC
Confidence 98644
No 31
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=9.7e-17 Score=132.72 Aligned_cols=81 Identities=17% Similarity=0.287 Sum_probs=74.0
Q ss_pred CCCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHHhcCCccCCceEEEccCcc
Q 006398 255 DQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEA 334 (647)
Q Consensus 255 ~~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~~~g~~~~g~~i~v~~~~~ 334 (647)
..++|||+|||+.+|+++|.++|++||.|.+|.|+.++.||.++|||||+|.+.++|..||+..+..|.|+.|.|.++..
T Consensus 9 ~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~~l~Gr~l~V~~a~~ 88 (103)
T d2cqda1 9 TFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNPIIDGRKANVNLAYL 88 (103)
T ss_dssp SSSEEEEECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSCEETTEECEEEESTT
T ss_pred CCcEEEEeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCCcCCCEEEEEEEcCC
Confidence 34689999999999999999999999999999999999999999999999999999999998334479999999988764
Q ss_pred h
Q 006398 335 E 335 (647)
Q Consensus 335 ~ 335 (647)
.
T Consensus 89 ~ 89 (103)
T d2cqda1 89 G 89 (103)
T ss_dssp T
T ss_pred C
Confidence 3
No 32
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=7.4e-17 Score=131.99 Aligned_cols=87 Identities=30% Similarity=0.531 Sum_probs=78.7
Q ss_pred CCcceEEeccCCCCCCCC-chhhhhhHHHHHHHHhhhcCCeEEEEEeeC-CCccEEEEeCChHHHHHHHHHHcCceeCCe
Q 006398 550 VPSECLLLKNMFDPKNET-YEEFDMDIKEDVEGECSKFGKLKHIFVEKD-SAGFVYLRFENTQSAFAAQRALHGRWFAGK 627 (647)
Q Consensus 550 ~~~~~l~V~nl~~p~~~~-d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~-~~G~afV~F~~~e~A~~A~~~lnG~~~~gr 627 (647)
..+++|+|.||+.|.++. +++++.+|.+||..+|++||.|..|.+..+ ++|+|||+|.++++|..|+..|||+.|+|+
T Consensus 6 ~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~~~~G~~fV~f~~~e~A~~A~~~lng~~~~gr 85 (99)
T d2dita1 6 RHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGR 85 (99)
T ss_dssp CSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETTCTTCEEEEECSCHHHHHHHHHHSTTCEETTE
T ss_pred CCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCCCCccEEEEEECCHHHHHHHHHHhCCcEECCE
Confidence 467899999999887754 567899999999999999999999998654 679999999999999999999999999999
Q ss_pred EEEEEEeCc
Q 006398 628 MITATFMVP 636 (647)
Q Consensus 628 ~i~v~~~~~ 636 (647)
+|.|+|+.+
T Consensus 86 ~i~v~~~~g 94 (99)
T d2dita1 86 QITAQAWDG 94 (99)
T ss_dssp ECEEEECCS
T ss_pred EEEEEEeCC
Confidence 999999864
No 33
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=8.8e-17 Score=129.57 Aligned_cols=80 Identities=24% Similarity=0.451 Sum_probs=73.8
Q ss_pred CCCCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHH-hcCCccCCceEEEccC
Q 006398 254 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPS 332 (647)
Q Consensus 254 ~~~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~-~~g~~~~g~~i~v~~~ 332 (647)
.+.++|||+|||+.+|+++|.++|++||+|..|.|+.+..++ +|||||+|.+.++|..|+. ++|..|.|+.|.|.++
T Consensus 6 ~~~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~--~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~~a 83 (90)
T d2cqia1 6 GQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWA 83 (90)
T ss_dssp CCCCEEEEESCCTTCCHHHHHHHHHHHSCEEEEEEECCCCSS--CCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEEEC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhcCCceeeeeecccCcc--ceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEc
Confidence 456899999999999999999999999999999999987654 8999999999999999997 9999999999999988
Q ss_pred cch
Q 006398 333 EAE 335 (647)
Q Consensus 333 ~~~ 335 (647)
.++
T Consensus 84 ~~~ 86 (90)
T d2cqia1 84 TTP 86 (90)
T ss_dssp CCT
T ss_pred CCC
Confidence 644
No 34
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.67 E-value=3.3e-17 Score=129.42 Aligned_cols=78 Identities=13% Similarity=0.172 Sum_probs=67.8
Q ss_pred CeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHH-hcCCccCCceEEEccCcc
Q 006398 257 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSEA 334 (647)
Q Consensus 257 ~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~-~~g~~~~g~~i~v~~~~~ 334 (647)
++|||+|||+.+|+++|.++|++||.|..+.++.+..+|.++|||||+|.+.++|..|++ |||..+.|++|.|.++.|
T Consensus 2 ~tl~v~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P 80 (81)
T d2ghpa1 2 CTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNP 80 (81)
T ss_dssp CEEEEECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred cEEEEECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEccC
Confidence 699999999999999999999999999999998888889999999999999999999997 999999999999988753
No 35
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.67 E-value=3.6e-17 Score=127.28 Aligned_cols=75 Identities=24% Similarity=0.408 Sum_probs=72.3
Q ss_pred eEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHHhcCCccCCceEEEccC
Q 006398 258 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPS 332 (647)
Q Consensus 258 ~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~~~g~~~~g~~i~v~~~ 332 (647)
+|||+|||+++|+++|+++|++||.|..+.++.++.+|..+|||||+|.+.++|.+||++||..|.|++|.|+.|
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHHCSSCCBTTBCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHhcCCCEECCeEEEEEEC
Confidence 489999999999999999999999999999999999999999999999999999999999999999999999764
No 36
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.67 E-value=1e-16 Score=126.93 Aligned_cols=79 Identities=25% Similarity=0.440 Sum_probs=74.9
Q ss_pred CcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEeec
Q 006398 360 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTD 438 (647)
Q Consensus 360 ~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~~ 438 (647)
.++|||+|||+.+++++|+++|++||.|..|.|+.+ .+|.++|||||+|.+.++|..||..|||..|.|+.|.|.|+.+
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~p 81 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP 81 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 367999999999999999999999999999999987 5889999999999999999999999999999999999999865
No 37
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=1.7e-16 Score=125.61 Aligned_cols=78 Identities=35% Similarity=0.532 Sum_probs=74.2
Q ss_pred cEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEeec
Q 006398 361 RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTD 438 (647)
Q Consensus 361 ~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~~ 438 (647)
++|||+|||+.+++++|+++|++||.|..|.|+.+ .++.++|||||+|.+.++|..|+..|+|..|.|+.|.|.||.+
T Consensus 3 t~l~V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~AkP 81 (82)
T d1fxla1 3 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 81 (82)
T ss_dssp SEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 57999999999999999999999999999999987 5788999999999999999999999999999999999999864
No 38
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.66 E-value=1.4e-16 Score=124.52 Aligned_cols=76 Identities=29% Similarity=0.540 Sum_probs=73.6
Q ss_pred EEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEee
Q 006398 362 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVT 437 (647)
Q Consensus 362 ~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~ 437 (647)
+|||+|||+.+++++|+++|++||.|..|.|+.+.+|.++|||||+|.+.++|..|++.|||..|+|+.|.|.++.
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~ 77 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVT 77 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHSCEEEEEESCSSCCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEEC
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCCCeEEEEEEeeccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEee
Confidence 5999999999999999999999999999999998899999999999999999999999999999999999999975
No 39
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=2.8e-16 Score=127.26 Aligned_cols=83 Identities=29% Similarity=0.421 Sum_probs=77.4
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEe
Q 006398 358 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAV 436 (647)
Q Consensus 358 ~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~ 436 (647)
..+++|||+|||+.+++++|.++|++||.|..|.|+.+ .++.++|||||+|.+.++|..|++.|||..|+|+.|.|.|+
T Consensus 5 ~~s~tlfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~a 84 (93)
T d1h2vz_ 5 KKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWD 84 (93)
T ss_dssp TTCCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 34689999999999999999999999999999999988 58889999999999999999999999999999999999998
Q ss_pred ecCC
Q 006398 437 TDQS 440 (647)
Q Consensus 437 ~~~~ 440 (647)
....
T Consensus 85 ~~~~ 88 (93)
T d1h2vz_ 85 AGFK 88 (93)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 6543
No 40
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.66 E-value=3.4e-16 Score=128.55 Aligned_cols=84 Identities=31% Similarity=0.494 Sum_probs=78.5
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEe
Q 006398 358 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAV 436 (647)
Q Consensus 358 ~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~ 436 (647)
....+|||+|||+.+++++|+++|.+||.|..|.|+.+ .++.++|||||+|.+.++|..||+.||+..|.|+.|.|.++
T Consensus 6 ~~~~~lfV~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~a 85 (99)
T d1whwa_ 6 SGSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPS 85 (99)
T ss_dssp CSCEEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEEC
T ss_pred CCCCEEEEECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 34678999999999999999999999999999999988 58999999999999999999999999999999999999999
Q ss_pred ecCCC
Q 006398 437 TDQSG 441 (647)
Q Consensus 437 ~~~~~ 441 (647)
..+..
T Consensus 86 ~~~~~ 90 (99)
T d1whwa_ 86 TIKKE 90 (99)
T ss_dssp CCCST
T ss_pred CCCCc
Confidence 87654
No 41
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=1.3e-16 Score=128.16 Aligned_cols=82 Identities=38% Similarity=0.636 Sum_probs=76.9
Q ss_pred CCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEee
Q 006398 359 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVT 437 (647)
Q Consensus 359 ~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~ 437 (647)
..++|||+|||+.+++++|+++|++||.|..|.|+.+ .+|.++|||||+|.+.++|..|+..|+|..|+|+.|.|.++.
T Consensus 4 ~~~tlfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a~ 83 (89)
T d2cqba1 4 TKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAK 83 (89)
T ss_dssp CCSCEEEESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred CCcEEEEeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 3689999999999999999999999999999999988 578999999999999999999999999999999999999987
Q ss_pred cCC
Q 006398 438 DQS 440 (647)
Q Consensus 438 ~~~ 440 (647)
+..
T Consensus 84 p~~ 86 (89)
T d2cqba1 84 PMR 86 (89)
T ss_dssp CCC
T ss_pred CCC
Confidence 643
No 42
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.66 E-value=6.5e-17 Score=126.43 Aligned_cols=75 Identities=24% Similarity=0.405 Sum_probs=71.2
Q ss_pred eEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHH-hcCCccCCceEEEccCc
Q 006398 258 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSE 333 (647)
Q Consensus 258 ~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~-~~g~~~~g~~i~v~~~~ 333 (647)
+|||+|||+.+++++|+++|.+||.|..|.|+.++ +|.++|||||+|.+.++|..|++ |||..+.|++|.|.++.
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~-~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~ 77 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVT 77 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHSCEEEEEESCSS-CCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEEC
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCCCeEEEEEEee-ccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEee
Confidence 69999999999999999999999999999999886 68999999999999999999997 99999999999998763
No 43
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=2.1e-16 Score=127.33 Aligned_cols=83 Identities=29% Similarity=0.456 Sum_probs=77.6
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEe
Q 006398 358 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAV 436 (647)
Q Consensus 358 ~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~ 436 (647)
....+|||+|||..+++++|.++|++||.|..|.|+.+ .+|.++|||||+|.+.++|.+||+.|+|..|+|+.|.|.|+
T Consensus 6 ~~~~~i~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~~a 85 (90)
T d2cq0a1 6 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWA 85 (90)
T ss_dssp SSSEEEEEESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEEee
Confidence 34678999999999999999999999999999999988 58899999999999999999999999999999999999998
Q ss_pred ecCC
Q 006398 437 TDQS 440 (647)
Q Consensus 437 ~~~~ 440 (647)
.++.
T Consensus 86 kp~~ 89 (90)
T d2cq0a1 86 KPST 89 (90)
T ss_dssp SCCC
T ss_pred eCCC
Confidence 7653
No 44
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=1.5e-16 Score=128.83 Aligned_cols=82 Identities=30% Similarity=0.555 Sum_probs=77.4
Q ss_pred CCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEee
Q 006398 359 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVT 437 (647)
Q Consensus 359 ~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~ 437 (647)
..++|||+|||+.+++++|+++|++||.|..|.|+.+ .+|.++|||||+|.+.++|..|+..|+|..|+|+.|.|.||.
T Consensus 8 ~~~tlfV~nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~A~ 87 (93)
T d1x5ua1 8 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKAS 87 (93)
T ss_dssp TTTEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEETT
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcC
Confidence 3578999999999999999999999999999999988 589999999999999999999999999999999999999987
Q ss_pred cCC
Q 006398 438 DQS 440 (647)
Q Consensus 438 ~~~ 440 (647)
.+.
T Consensus 88 ~~~ 90 (93)
T d1x5ua1 88 AHN 90 (93)
T ss_dssp TTS
T ss_pred CCC
Confidence 764
No 45
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=1.8e-16 Score=124.62 Aligned_cols=76 Identities=30% Similarity=0.476 Sum_probs=73.0
Q ss_pred EEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEee
Q 006398 362 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVT 437 (647)
Q Consensus 362 ~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~ 437 (647)
.|||+|||+.+++++|.++|++||.|..|.|+.+ .+|.++|||||+|.+.++|..|++.|+|..|.|+.|+|.|+.
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~ 78 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQ 78 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 5999999999999999999999999999999998 579999999999999999999999999999999999999985
No 46
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=2.5e-16 Score=129.89 Aligned_cols=84 Identities=25% Similarity=0.396 Sum_probs=77.9
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEe
Q 006398 358 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAV 436 (647)
Q Consensus 358 ~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~ 436 (647)
++.++|||+|||+.+++++|+++|+.||.|..+.++.+ .+|.++|||||+|.+.++|..||..|||..|.|+.|.|.|+
T Consensus 16 p~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~~a 95 (102)
T d2cpza1 16 PEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLK 95 (102)
T ss_dssp STTCCEEEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEECC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEEEe
Confidence 34678999999999999999999999999999998887 68899999999999999999999999999999999999998
Q ss_pred ecCCC
Q 006398 437 TDQSG 441 (647)
Q Consensus 437 ~~~~~ 441 (647)
..+..
T Consensus 96 ~~k~~ 100 (102)
T d2cpza1 96 RSKND 100 (102)
T ss_dssp CCSCC
T ss_pred CCCCC
Confidence 87653
No 47
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.65 E-value=2.4e-16 Score=124.79 Aligned_cols=77 Identities=19% Similarity=0.315 Sum_probs=70.8
Q ss_pred CCCcceEEeccCCCCCCCCchhhhhhHHHHHHHHhhhcCCeEEEEEeeCCCccEEEEeCChHHHHHHHHHHcCcee-CCe
Q 006398 549 GVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWF-AGK 627 (647)
Q Consensus 549 ~~~~~~l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~~~G~afV~F~~~e~A~~A~~~lnG~~~-~gr 627 (647)
.+|+++|||+|| |..++ +++|.++|+.||.|..|.+.+..+|+|||+|.+.++|..|+..|||..| +|+
T Consensus 5 ~pP~~tl~V~nL--p~~~t--------~~~l~~~f~~~G~i~~v~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~~~~ 74 (83)
T d2b0ga1 5 QPPNQILFLTNL--PEETN--------EMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFTTELQSNAAKEALQGFKITPTH 74 (83)
T ss_dssp CSCCSEEEEESC--CTTCC--------HHHHHHHHTTSTTEEEEEECTTTCSCEEEEESSHHHHHHHHHHHTTCBSSTTC
T ss_pred CCCCCEEEEECC--CCCCC--------HHHHHhhhccCccEEEeeeecccceeEEEecCCHHHHHHHHHHhCCcEeCCCc
Confidence 567889999999 77777 6999999999999999999888889999999999999999999999998 579
Q ss_pred EEEEEEeC
Q 006398 628 MITATFMV 635 (647)
Q Consensus 628 ~i~v~~~~ 635 (647)
+|+|+|+-
T Consensus 75 ~i~v~~ak 82 (83)
T d2b0ga1 75 AMKITFAK 82 (83)
T ss_dssp BCEEEECC
T ss_pred EEEEEEec
Confidence 99999974
No 48
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.65 E-value=4.7e-17 Score=129.91 Aligned_cols=81 Identities=12% Similarity=0.191 Sum_probs=70.7
Q ss_pred CCCeEEEecCCCCCC-HHHHHHHHHhcCCeeEEEEeee-CCCCCcccEEEEEecccccHHHHHHhcCCccCCceEEEccC
Q 006398 255 DQRTVFAYQICLKAD-ERDVYEFFSRAGKVRDVRLIMD-RNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPS 332 (647)
Q Consensus 255 ~~~~v~v~~Lp~~~t-~~~l~~~f~~~G~i~~v~~~~~-~~tg~~~g~afV~f~~~~~a~~al~~~g~~~~g~~i~v~~~ 332 (647)
..++|||+|||+.+| +++|+++|++||.|..|.|+.+ ..+|.++|||||+|.+.++|.+||+|||..|.|+.|.|.++
T Consensus 3 e~~~l~V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~~n~~~~~gr~l~V~~a 82 (86)
T d2ghpa3 3 EGREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQMNRSLLGNREISVSLA 82 (86)
T ss_dssp TTTEEEEEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGGGTTEEETTEEEEEEEC
T ss_pred CCCEEEEECCCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHhcCCCEECCEEEEEEEc
Confidence 458999999999986 5569999999999999998774 56899999999999999999999999999999999999987
Q ss_pred cch
Q 006398 333 EAE 335 (647)
Q Consensus 333 ~~~ 335 (647)
.+.
T Consensus 83 ~~k 85 (86)
T d2ghpa3 83 DKK 85 (86)
T ss_dssp CCC
T ss_pred CCC
Confidence 643
No 49
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=5.9e-17 Score=128.64 Aligned_cols=77 Identities=25% Similarity=0.416 Sum_probs=71.9
Q ss_pred EEEecCCCCCCHHHHHHHHHhcCCeeE-EEEeeeCCCCCcccEEEEEecccccHHHHHH-hcCCccCCceEEEccCcch
Q 006398 259 VFAYQICLKADERDVYEFFSRAGKVRD-VRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSEAE 335 (647)
Q Consensus 259 v~v~~Lp~~~t~~~l~~~f~~~G~i~~-v~~~~~~~tg~~~g~afV~f~~~~~a~~al~-~~g~~~~g~~i~v~~~~~~ 335 (647)
|||+|||+++|+++|.++|++||.|.. +.++.+..+|.++|||||+|.+.++|..||+ |+|..|.|++|.|.++.+.
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~k 79 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK 79 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCCC
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecCC
Confidence 799999999999999999999999876 4788899999999999999999999999997 9999999999999987643
No 50
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.64 E-value=1.4e-16 Score=127.06 Aligned_cols=75 Identities=24% Similarity=0.433 Sum_probs=70.6
Q ss_pred EEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCC---CcccEEEEEecccccHHHHHH-hcCCccCCceEEEccCc
Q 006398 259 VFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSR---RSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSE 333 (647)
Q Consensus 259 v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg---~~~g~afV~f~~~~~a~~al~-~~g~~~~g~~i~v~~~~ 333 (647)
|||+|||+.+|+++|+++|++||.|..|.|+.++.++ .++|||||+|.+.++|..||+ |||..|.|+.|.|.++.
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~ 79 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISE 79 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSS
T ss_pred CEEcCCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECC
Confidence 7999999999999999999999999999999988765 479999999999999999996 99999999999998874
No 51
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.64 E-value=3.4e-16 Score=127.01 Aligned_cols=83 Identities=29% Similarity=0.572 Sum_probs=76.8
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC--CCCCcceEEEEEeCCHHHHHHHHHHc-CCceecCeEEEEE
Q 006398 358 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD--ETGHCKGFGFVQFARLEDARNALNLN-GQLEIVGRAIKVS 434 (647)
Q Consensus 358 ~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~--~~g~~~g~afVef~~~~~A~~Al~~l-~g~~~~g~~i~v~ 434 (647)
....+|||+|||+.+++++|+++|.+||.|..|.|+.+ .+|.++|||||+|.+.++|.+||..| ||..|+|+.|.|.
T Consensus 6 ~~~~~l~V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V~ 85 (94)
T d2cpha1 6 QTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLE 85 (94)
T ss_dssp SCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEEEE
Confidence 44678999999999999999999999999999999887 37889999999999999999999987 8999999999999
Q ss_pred EeecCC
Q 006398 435 AVTDQS 440 (647)
Q Consensus 435 ~~~~~~ 440 (647)
||....
T Consensus 86 ~A~~~~ 91 (94)
T d2cpha1 86 WADSEV 91 (94)
T ss_dssp ECCCCC
T ss_pred EcCCCC
Confidence 997764
No 52
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=4.4e-16 Score=123.39 Aligned_cols=76 Identities=33% Similarity=0.525 Sum_probs=71.8
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEE
Q 006398 358 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKV 433 (647)
Q Consensus 358 ~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v 433 (647)
.+.++|||+|||+.+++++|+++|++||.|..|.|+.+ .++.++|||||+|.+.++|..|+..|+|..|+|+.|+|
T Consensus 7 ~~~~~l~V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 7 DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp CGGGCEEEESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 34688999999999999999999999999999999988 57899999999999999999999999999999999987
No 53
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=1.9e-16 Score=125.81 Aligned_cols=76 Identities=18% Similarity=0.256 Sum_probs=71.7
Q ss_pred CCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHHhcCCccCCceEEEccC
Q 006398 256 QRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPS 332 (647)
Q Consensus 256 ~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~~~g~~~~g~~i~v~~~ 332 (647)
.++|||+|||+.+|+++|.++|+.||+|..|.|..+. +|.++|||||+|.+.++|.+||++++..+.|+.|.|++.
T Consensus 6 ~rtvfV~nlp~~~te~~l~~~F~~~G~v~~v~l~~~~-~~~~kG~afV~f~~~e~a~~al~~~~~~~~g~~l~v~~~ 81 (85)
T d1zh5a2 6 NRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTL-HKAFKGSIFVVFDSIESAKKFVETPGQKYKETDLLILFK 81 (85)
T ss_dssp TTEEEEECCCTTCCHHHHHHHHTTSCCEEEEEEEECT-TCCEEEEEEEEESCHHHHHHHHTCCCCEETTEECEEEEG
T ss_pred cCEEEEECCCCCCCHHHHHHHHHHhcccccceeeeec-cCCcceEEEEEEcCHHHHHHHHHHCCCEECCEEEEEEEc
Confidence 4799999999999999999999999999999998775 789999999999999999999999999999999999764
No 54
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=1.4e-15 Score=123.16 Aligned_cols=82 Identities=35% Similarity=0.565 Sum_probs=75.7
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEee
Q 006398 358 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVT 437 (647)
Q Consensus 358 ~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~ 437 (647)
...++|||+|||+.+++++|+++|++||.|..|.++.+..+ ++|||||+|.+.++|.+|+..|+|..|+|+.|.|.||.
T Consensus 9 ~~~~~l~v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~~~-~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~A~ 87 (93)
T d2cq3a1 9 STPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT 87 (93)
T ss_dssp CCCCEEEEESCCTTCCHHHHHHHGGGTSCEEEEEEECCTTT-TCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEECC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhhcceeeeccccccccC-CcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEecC
Confidence 44678999999999999999999999999999999887544 58999999999999999999999999999999999998
Q ss_pred cCC
Q 006398 438 DQS 440 (647)
Q Consensus 438 ~~~ 440 (647)
++.
T Consensus 88 ~r~ 90 (93)
T d2cq3a1 88 ARV 90 (93)
T ss_dssp SSC
T ss_pred cCC
Confidence 764
No 55
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=2.5e-16 Score=125.24 Aligned_cols=80 Identities=20% Similarity=0.458 Sum_probs=75.7
Q ss_pred cEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEeecC
Q 006398 361 RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQ 439 (647)
Q Consensus 361 ~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~~~ 439 (647)
.+|||+|||+.+++++|+++|++||.|..|.|+.+ .+|.++|||||+|.+.++|..|+..|+|..|.|+.|.|.|+...
T Consensus 2 ~rlfV~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~~ 81 (85)
T d2u2fa_ 2 HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVG 81 (85)
T ss_dssp CCEEEETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCC
Confidence 46999999999999999999999999999999998 58999999999999999999999999999999999999999765
Q ss_pred C
Q 006398 440 S 440 (647)
Q Consensus 440 ~ 440 (647)
.
T Consensus 82 ~ 82 (85)
T d2u2fa_ 82 A 82 (85)
T ss_dssp C
T ss_pred C
Confidence 4
No 56
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=1.3e-15 Score=125.83 Aligned_cols=82 Identities=30% Similarity=0.479 Sum_probs=75.5
Q ss_pred CCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEee
Q 006398 359 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVT 437 (647)
Q Consensus 359 ~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~ 437 (647)
..++|||+|||+.+++++|+++|++||.|..|.|+.+ .+|.++|||||+|.+.++|.+||+.+++ .|+|+.|.|.++.
T Consensus 9 ~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V~~a~ 87 (103)
T d2cqda1 9 TFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRKANVNLAY 87 (103)
T ss_dssp SSSEEEEECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEECEEEEST
T ss_pred CCcEEEEeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEEEEEEEcC
Confidence 3578999999999999999999999999999999998 5799999999999999999999999987 6999999999987
Q ss_pred cCCC
Q 006398 438 DQSG 441 (647)
Q Consensus 438 ~~~~ 441 (647)
....
T Consensus 88 ~~~~ 91 (103)
T d2cqda1 88 LGAK 91 (103)
T ss_dssp TTCC
T ss_pred CCCC
Confidence 6543
No 57
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=5.1e-16 Score=125.76 Aligned_cols=80 Identities=25% Similarity=0.439 Sum_probs=73.5
Q ss_pred CCCCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHH-hcCCccCCceEEEccC
Q 006398 254 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPS 332 (647)
Q Consensus 254 ~~~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~-~~g~~~~g~~i~v~~~ 332 (647)
...++|||+|||+.+|+++|.++|.+||.|..|.++.+.. .++|||||+|.+.++|..||. |||..|.|+.|.|.++
T Consensus 9 ~~~~~l~v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~~--~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~A 86 (93)
T d2cq3a1 9 STPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNER--GSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNA 86 (93)
T ss_dssp CCCCEEEEESCCTTCCHHHHHHHGGGTSCEEEEEEECCTT--TTCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhhcceeeecccccccc--CCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEec
Confidence 3457899999999999999999999999999999998875 379999999999999999996 9999999999999988
Q ss_pred cch
Q 006398 333 EAE 335 (647)
Q Consensus 333 ~~~ 335 (647)
.+.
T Consensus 87 ~~r 89 (93)
T d2cq3a1 87 TAR 89 (93)
T ss_dssp CSS
T ss_pred CcC
Confidence 653
No 58
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.62 E-value=4.3e-16 Score=128.03 Aligned_cols=82 Identities=22% Similarity=0.421 Sum_probs=75.0
Q ss_pred CCCCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHH-hc------CCccCCce
Q 006398 254 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LS------GQPLLGQP 326 (647)
Q Consensus 254 ~~~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~-~~------g~~~~g~~ 326 (647)
...++|||+|||+.+|+++|+++|.+||.|..+.++.+..++.++|||||+|.+.++|..||+ ++ |..|.|+.
T Consensus 6 ~~~~tlfV~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~gr~ 85 (98)
T d1x4ha1 6 TEGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGRQ 85 (98)
T ss_dssp CCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSSCE
T ss_pred CCCCEEEEcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECCEE
Confidence 346799999999999999999999999999999999999999999999999999999999996 65 66788999
Q ss_pred EEEccCcch
Q 006398 327 VMVKPSEAE 335 (647)
Q Consensus 327 i~v~~~~~~ 335 (647)
|.|.++.+.
T Consensus 86 l~v~~a~~k 94 (98)
T d1x4ha1 86 LKVDLAVTR 94 (98)
T ss_dssp EEEECCCCC
T ss_pred EEEEECCCC
Confidence 999987543
No 59
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=2.5e-16 Score=126.58 Aligned_cols=77 Identities=26% Similarity=0.433 Sum_probs=71.7
Q ss_pred CeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHH-hcCCccCCceEEEccCcch
Q 006398 257 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSEAE 335 (647)
Q Consensus 257 ~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~-~~g~~~~g~~i~v~~~~~~ 335 (647)
.+|||+|||+.+|+++|.++|.+||.|..+.|+.+.. .++|||||+|.+.++|..||+ |||..|.|+.|.|.++.+.
T Consensus 9 ~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~--~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~~~ 86 (89)
T d1cvja2 9 GNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDEN--GSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 86 (89)
T ss_dssp TEEEEESCCSSCCHHHHHHHHHTTSCEEEEEECCBTT--BCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECCCT
T ss_pred CEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEeecC--CCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCC
Confidence 5899999999999999999999999999999998874 478999999999999999996 9999999999999988644
No 60
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=4.9e-16 Score=125.29 Aligned_cols=83 Identities=35% Similarity=0.633 Sum_probs=77.1
Q ss_pred CCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEee
Q 006398 359 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVT 437 (647)
Q Consensus 359 ~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~ 437 (647)
...+|||+|||+.+++++|+++|++||.|..|.++.. .+|.++|||||+|.+.++|..|+..|+|..|+|+.|.|.++.
T Consensus 4 ~~~kifV~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a~ 83 (90)
T d1x5sa1 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAG 83 (90)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEEE
T ss_pred CCCEEEEECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcC
Confidence 3578999999999999999999999999999988877 588899999999999999999999999999999999999998
Q ss_pred cCCC
Q 006398 438 DQSG 441 (647)
Q Consensus 438 ~~~~ 441 (647)
.+..
T Consensus 84 ~~~~ 87 (90)
T d1x5sa1 84 KSSD 87 (90)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7654
No 61
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.62 E-value=8.6e-16 Score=122.25 Aligned_cols=78 Identities=28% Similarity=0.480 Sum_probs=72.9
Q ss_pred CCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecC--eEEEEEE
Q 006398 359 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVG--RAIKVSA 435 (647)
Q Consensus 359 ~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g--~~i~v~~ 435 (647)
..++|||+|||+.+++++|.++|++||.|..|.|+.+ .+|.++|||||+|.+.++|..|++.|||..+.| ++|.|.|
T Consensus 5 ~~t~lfV~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V~~ 84 (85)
T d1b7fa2 5 KDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRL 84 (85)
T ss_dssp TTCEEEEESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEEEE
Confidence 3567999999999999999999999999999999988 589999999999999999999999999999876 8899998
Q ss_pred e
Q 006398 436 V 436 (647)
Q Consensus 436 ~ 436 (647)
|
T Consensus 85 A 85 (85)
T d1b7fa2 85 A 85 (85)
T ss_dssp C
T ss_pred C
Confidence 6
No 62
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=1.6e-15 Score=121.96 Aligned_cols=82 Identities=33% Similarity=0.478 Sum_probs=74.6
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEee
Q 006398 358 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVT 437 (647)
Q Consensus 358 ~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~ 437 (647)
...++|||+|||..+++++|+++|+.||.|..|.|+.+..+ .+|||||+|.+.++|..|+..|+|..|.|+.|.|.|+.
T Consensus 6 ~~~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~-~~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~~a~ 84 (90)
T d2cqia1 6 GQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTS-NDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWAT 84 (90)
T ss_dssp CCCCEEEEESCCTTCCHHHHHHHHHHHSCEEEEEEECCCCS-SCCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhcCCceeeeeecccCc-cceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcC
Confidence 34679999999999999999999999999999999887433 37899999999999999999999999999999999987
Q ss_pred cCC
Q 006398 438 DQS 440 (647)
Q Consensus 438 ~~~ 440 (647)
.+.
T Consensus 85 ~~~ 87 (90)
T d2cqia1 85 TPS 87 (90)
T ss_dssp CTT
T ss_pred CCC
Confidence 654
No 63
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.62 E-value=5e-16 Score=122.51 Aligned_cols=78 Identities=18% Similarity=0.278 Sum_probs=67.9
Q ss_pred cEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEeec
Q 006398 361 RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTD 438 (647)
Q Consensus 361 ~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~~ 438 (647)
++|||+|||+.+++++|+++|+.||.|..+.++.+ ..|.++|||||+|.+.++|.+|+..|||..|.|+.|.|.++.+
T Consensus 2 ~tl~v~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P 80 (81)
T d2ghpa1 2 CTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNP 80 (81)
T ss_dssp CEEEEECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred cEEEEECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEccC
Confidence 58999999999999999999999999987776665 6888999999999999999999999999999999999999864
No 64
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=1.3e-15 Score=128.72 Aligned_cols=79 Identities=20% Similarity=0.324 Sum_probs=71.5
Q ss_pred CcceEEeccCCCCCCCCchhhhhhHHHHHHHHhhhcCCeEEEEEeeC--CCccEEEEeCChHHHHHHHHHHcCceeCCeE
Q 006398 551 PSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD--SAGFVYLRFENTQSAFAAQRALHGRWFAGKM 628 (647)
Q Consensus 551 ~~~~l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~--~~G~afV~F~~~e~A~~A~~~lnG~~~~gr~ 628 (647)
.+++|||+|| |..++ +++|.++|+.||.|..|.+... ++|+|||+|.+.++|..|+..|||..|.|++
T Consensus 6 ~~r~l~V~nL--p~~~t--------e~~l~~~F~~~G~v~~i~~~~~~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~ 75 (114)
T d2f9da1 6 VNRILYIRNL--PYKIT--------AEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNACDHLSGFNVCNRY 75 (114)
T ss_dssp CCSEEEEESC--CTTCC--------HHHHHHHHHTTSCEEEEEEECSTTTTTEEEEEESSHHHHHHHHHHHTTCEETTEE
T ss_pred CCCEEEEECC--CCCCC--------HHHHHHHHhhcCCeEeecccccCCcCCeEEEEECCHHHHHHHHHHhCCCEECCEE
Confidence 4668999999 87777 7999999999999999999654 6899999999999999999999999999999
Q ss_pred EEEEEeCchhh
Q 006398 629 ITATFMVPQTY 639 (647)
Q Consensus 629 i~v~~~~~~~~ 639 (647)
|.|.|+.+...
T Consensus 76 l~V~~a~~~~~ 86 (114)
T d2f9da1 76 LVVLYYNANRA 86 (114)
T ss_dssp CEEEECCHHHH
T ss_pred EEEEEcCCCch
Confidence 99999876543
No 65
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.61 E-value=2.2e-15 Score=132.20 Aligned_cols=85 Identities=31% Similarity=0.486 Sum_probs=78.4
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEE
Q 006398 357 SGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSA 435 (647)
Q Consensus 357 ~~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~ 435 (647)
....++|||+|||+.+++++|+++|++||.|..|.|+.+ .+|.++|||||+|.+.++|..||+.|||..|+|+.|.|.|
T Consensus 39 ~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~ 118 (139)
T d1u6fa1 39 PDVLRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVAL 118 (139)
T ss_dssp TTTTSEEEEESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 344678999999999999999999999999999999887 5888999999999999999999999999999999999999
Q ss_pred eecCCC
Q 006398 436 VTDQSG 441 (647)
Q Consensus 436 ~~~~~~ 441 (647)
+.....
T Consensus 119 a~~~~~ 124 (139)
T d1u6fa1 119 AASGHQ 124 (139)
T ss_dssp SSCCCC
T ss_pred cCCCCC
Confidence 876553
No 66
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=4.1e-16 Score=128.88 Aligned_cols=82 Identities=18% Similarity=0.388 Sum_probs=74.9
Q ss_pred CCCCeEEEecCCCCCCHHHHHHHHHhcCCee--------EEEEeeeCCCCCcccEEEEEecccccHHHHHH-hcCCccCC
Q 006398 254 RDQRTVFAYQICLKADERDVYEFFSRAGKVR--------DVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLG 324 (647)
Q Consensus 254 ~~~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~--------~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~-~~g~~~~g 324 (647)
....+|||+|||+.+|+++|.++|.+||.|. .+.+..+..+|.++|||||+|.+.++|..||+ |||..|.|
T Consensus 6 ~~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~~g 85 (101)
T d2cpea1 6 SDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQG 85 (101)
T ss_dssp CCCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEETT
T ss_pred CCCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEECC
Confidence 3567999999999999999999999999874 67778888899999999999999999999997 99999999
Q ss_pred ceEEEccCcch
Q 006398 325 QPVMVKPSEAE 335 (647)
Q Consensus 325 ~~i~v~~~~~~ 335 (647)
+.|.|.++...
T Consensus 86 r~i~V~~a~~~ 96 (101)
T d2cpea1 86 SKLKVSLARKK 96 (101)
T ss_dssp EECEEECSSCC
T ss_pred EEEEEEEcCCC
Confidence 99999988654
No 67
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=6.3e-16 Score=129.68 Aligned_cols=77 Identities=19% Similarity=0.261 Sum_probs=69.5
Q ss_pred cceEEeccCCCCCCCCchhhhhhHHHHHHHHhhhcCCeEEEEEeeCCCccEEEEeCChHHHHHHHHHHcCceeCCeEEEE
Q 006398 552 SECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITA 631 (647)
Q Consensus 552 ~~~l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~~~G~afV~F~~~e~A~~A~~~lnG~~~~gr~i~v 631 (647)
+++|||+|| .|..++ +++|.++|+.||.|..|.|+.+.+|+|||+|.++++|.+|++.|||..|.|++|.|
T Consensus 2 ~~~l~V~nL-~p~~~t--------e~~L~~~F~~fG~I~~v~i~~~~kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v 72 (109)
T d2adca1 2 NSVLLVSNL-NPERVT--------PQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRI 72 (109)
T ss_dssp CSEEEEESC-CTTTCC--------HHHHHHHHHHHTCEEEEEECCTTSCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEE
T ss_pred CCEEEEeCC-CcccCC--------HHHHHHHHhhccccceEEEEecccceEEEEECCHHHHHHHHHHhCCCEECCEEEEE
Confidence 569999999 223355 79999999999999999999988999999999999999999999999999999999
Q ss_pred EEeCch
Q 006398 632 TFMVPQ 637 (647)
Q Consensus 632 ~~~~~~ 637 (647)
.|+...
T Consensus 73 ~~s~~~ 78 (109)
T d2adca1 73 TLSKHQ 78 (109)
T ss_dssp ECCSCC
T ss_pred EECCCC
Confidence 998543
No 68
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=1.3e-15 Score=122.14 Aligned_cols=81 Identities=33% Similarity=0.516 Sum_probs=74.0
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEe
Q 006398 358 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAV 436 (647)
Q Consensus 358 ~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~ 436 (647)
....+|||+|||+.+++++|.++|++||.|..|.|+.+ .+|.++|||||+|.+.++|.+||+.+ ..|+|+.|.|.++
T Consensus 6 ~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~~--~~l~Gr~i~v~~a 83 (90)
T d2cqga1 6 QKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQR--HMIDGRWCDCKLP 83 (90)
T ss_dssp CCCCCEEEESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHSC--EEETTEEEEEECC
T ss_pred cCCCeEEEECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhcC--CccCCEEeEEEeC
Confidence 34678999999999999999999999999999999998 58999999999999999999999854 4799999999998
Q ss_pred ecCC
Q 006398 437 TDQS 440 (647)
Q Consensus 437 ~~~~ 440 (647)
..+.
T Consensus 84 ~~k~ 87 (90)
T d2cqga1 84 NSKQ 87 (90)
T ss_dssp CTTC
T ss_pred CCCC
Confidence 7764
No 69
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=1e-15 Score=124.58 Aligned_cols=76 Identities=18% Similarity=0.273 Sum_probs=69.5
Q ss_pred CCcceEEeccCCCCCCCCchhhhhhHHHHHHHHhhhcCCeEEEEEeeCCCccEEEEeCChHHHHHHHHHHcCceeCCeEE
Q 006398 550 VPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMI 629 (647)
Q Consensus 550 ~~~~~l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~~~G~afV~F~~~e~A~~A~~~lnG~~~~gr~i 629 (647)
++.++|||+|| |..++ +++|.++|+.||.|..|+|.+ .+|||||+|.+.++|..|+..|||..|+|++|
T Consensus 16 ~~~~~l~v~nL--~~~~t--------e~~L~~~F~~fG~i~~v~i~~-~kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l 84 (96)
T d1x4ga1 16 PKNCTVYCGGI--ASGLT--------DQLMRQTFSPFGQIMEIRVFP-EKGYSFVRFSTHESAAHAIVSVNGTTIEGHVV 84 (96)
T ss_dssp SSCCEEEEECC--SSCCC--------HHHHHHHHHHHSCEEEEEEET-TTTEEEEEESSHHHHHHHHHHHTTCEETTEEC
T ss_pred CCCCEEEEcCC--CCCCC--------HHHHHHHHHHhCCceEEEEEe-cceEEEEEECCHHHHHHHHHHhCCCEECCEEE
Confidence 34568999999 77777 799999999999999999976 58999999999999999999999999999999
Q ss_pred EEEEeCc
Q 006398 630 TATFMVP 636 (647)
Q Consensus 630 ~v~~~~~ 636 (647)
+|+|+.+
T Consensus 85 ~v~~ak~ 91 (96)
T d1x4ga1 85 KCYWGKE 91 (96)
T ss_dssp EEECCCC
T ss_pred EEEEcCC
Confidence 9999764
No 70
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=6.8e-16 Score=128.14 Aligned_cols=82 Identities=28% Similarity=0.411 Sum_probs=73.6
Q ss_pred CCCCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeC-CCCCcccEEEEEecccccHHHHHHhcCCccCCceEEEccC
Q 006398 254 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDR-NSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPS 332 (647)
Q Consensus 254 ~~~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~-~tg~~~g~afV~f~~~~~a~~al~~~g~~~~g~~i~v~~~ 332 (647)
.+.++|||+|||+.+|+++|+++|..|| |..+.++.+. .++.++|||||+|.+.++|++|++||+..|.|+.|.|.++
T Consensus 13 ~p~~~v~V~nLp~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~~~~~~~~~gr~l~V~~a 91 (104)
T d1wi8a_ 13 SPPYTAFLGNLPYDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSALSLNEESLGNKRIRVDVA 91 (104)
T ss_dssp SSCEEEEEESCCSSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHHGGGTCEETTEECEEEEC
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 4568999999999999999999999999 7778777765 5789999999999999999988899999999999999987
Q ss_pred cchh
Q 006398 333 EAEK 336 (647)
Q Consensus 333 ~~~~ 336 (647)
.+..
T Consensus 92 ~~~~ 95 (104)
T d1wi8a_ 92 DQAQ 95 (104)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 6543
No 71
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=5.8e-16 Score=127.53 Aligned_cols=79 Identities=23% Similarity=0.435 Sum_probs=72.7
Q ss_pred CCCCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHH-hcCCccCCceEEEccC
Q 006398 254 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPS 332 (647)
Q Consensus 254 ~~~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~-~~g~~~~g~~i~v~~~ 332 (647)
...++|||+|||+.+|+++|.++|++||.|..+.++.+. ++.++|||||+|.+.++|.+||. |||..|.|+++.|.++
T Consensus 16 ~~~~~lfV~nLp~~~te~~L~~~F~~~G~i~~~~~~~~~-~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~~~ 94 (101)
T d1x5oa1 16 QDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDS-SGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPT 94 (101)
T ss_dssp CCTTEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEEECS-SSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSCCCS
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhhcccccceeeeccc-ccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCccCCC
Confidence 345799999999999999999999999999999998875 68999999999999999999996 9999999999988765
Q ss_pred c
Q 006398 333 E 333 (647)
Q Consensus 333 ~ 333 (647)
.
T Consensus 95 ~ 95 (101)
T d1x5oa1 95 E 95 (101)
T ss_dssp S
T ss_pred C
Confidence 3
No 72
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=1.1e-15 Score=121.51 Aligned_cols=77 Identities=29% Similarity=0.480 Sum_probs=72.0
Q ss_pred CcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecC--eEEEEEEe
Q 006398 360 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVG--RAIKVSAV 436 (647)
Q Consensus 360 ~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g--~~i~v~~~ 436 (647)
.++|||+|||+.+++++|+++|++||.|..|.|+.+ .+|.++|||||+|.+.++|..|++.|||..+.| ++|.|.||
T Consensus 6 ~~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~~A 85 (85)
T d1fxla2 6 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFA 85 (85)
T ss_dssp TCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEEC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEEeC
Confidence 467999999999999999999999999999999988 578999999999999999999999999999988 56999886
No 73
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=1.5e-15 Score=120.17 Aligned_cols=77 Identities=32% Similarity=0.626 Sum_probs=72.0
Q ss_pred CcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEee
Q 006398 360 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVT 437 (647)
Q Consensus 360 ~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~ 437 (647)
.++|||+|||+.+++++|.++|++||.|..|.|+.+ .+|.++|||||+|.+.+.|.+||+ +++..|.|+.|.|..|.
T Consensus 6 ~~~lfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~A~ 83 (84)
T d1l3ka1 6 LRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRAV 83 (84)
T ss_dssp GGEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEECC
T ss_pred CcEEEEECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEeee
Confidence 578999999999999999999999999999999998 589999999999999999999998 57789999999998864
No 74
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.60 E-value=8.6e-16 Score=129.32 Aligned_cols=80 Identities=19% Similarity=0.255 Sum_probs=72.5
Q ss_pred CcceEEeccCCCCCCCCchhhhhhHHHHHHHHhhhcCCeEEEEEeeCCCccEEEEeCChHHHHHHHHHHcCceeCCeEEE
Q 006398 551 PSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMIT 630 (647)
Q Consensus 551 ~~~~l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~~~G~afV~F~~~e~A~~A~~~lnG~~~~gr~i~ 630 (647)
..++|||+|| |..++ +++|.++|+.||.|..|.|. .++|+|||+|.+.++|++|++.|||..|.|++|.
T Consensus 9 ~~~~l~V~nL--p~~~t--------~~~L~~~F~~fG~I~~v~l~-~~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~ 77 (111)
T d1whxa_ 9 SKTVILAKNL--PAGTL--------AAEIQETFSRFGSLGRVLLP-EGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLY 77 (111)
T ss_dssp EEEEEEEESC--CTTCC--------HHHHHHHHHTTSCEEEEECC-SSSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCE
T ss_pred CCCEEEEECC--CCCCC--------HHHHHhhhhccCCccEEEee-ccCceEEEEEcCHHHHHHHHHHHcCCccCCCeEE
Confidence 4568999999 87777 79999999999999999884 4789999999999999999999999999999999
Q ss_pred EEEeCchhhhc
Q 006398 631 ATFMVPQTYEA 641 (647)
Q Consensus 631 v~~~~~~~~~~ 641 (647)
|.|+....+..
T Consensus 78 v~~a~~~~~~~ 88 (111)
T d1whxa_ 78 LEWAPIGVFGA 88 (111)
T ss_dssp EEEEETTTTCC
T ss_pred EEECCCCcccc
Confidence 99998776543
No 75
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=9.3e-16 Score=125.86 Aligned_cols=78 Identities=23% Similarity=0.385 Sum_probs=73.6
Q ss_pred CcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEeec
Q 006398 360 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTD 438 (647)
Q Consensus 360 ~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~~ 438 (647)
.++|||+|||+.+++++|+++|+.||.|..|.|+.+ .+|.++|||||+|.+.++|.+|++ |+|..|.|+.|.|.++..
T Consensus 18 ~~tifV~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~-l~g~~~~G~~l~V~~a~~ 96 (101)
T d2cq4a1 18 ARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG-LTGQRLLGVPIIVQASQA 96 (101)
T ss_dssp HTEEEEESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH-HTTEEETTEEEEEEEHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHH-HCCCEECCEEEEEEECCC
Confidence 478999999999999999999999999999999998 589999999999999999999996 999999999999999754
No 76
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=7.8e-16 Score=125.64 Aligned_cols=83 Identities=27% Similarity=0.383 Sum_probs=71.6
Q ss_pred CcceEEeccCCCC-CCCCchhhhhhHHHHHHHHhhhcCCeEEEEEeeCCCccEEEEeCChHHHHHHHHHHcCceeCCeEE
Q 006398 551 PSECLLLKNMFDP-KNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMI 629 (647)
Q Consensus 551 ~~~~l~V~nl~~p-~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~~~G~afV~F~~~e~A~~A~~~lnG~~~~gr~i 629 (647)
...+|||+|| + ..++ +++|.++|++||.|..|.| ++|||||+|.+.++|..|+..|||..|.|++|
T Consensus 14 ~~~~lfV~nL--~~~~~~--------~~~L~~~F~~~G~i~~~~i---~rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l 80 (98)
T d1wf2a_ 14 MNSRVFIGNL--NTLVVK--------KSDVEAIFSKYGKIVGCSV---HKGFAFVQYVNERNARAAVAGEDGRMIAGQVL 80 (98)
T ss_dssp CCCCEEEEEE--CTTTCC--------HHHHHHSSTTSSCEEEEEE---ETEEEEEEESSHHHHHHHHHTTTTCEETTEEC
T ss_pred CCcEEEEeCC--CcccCC--------HHHHHHHHhhcCCEEEEEE---eCCeEEEEECCHHHHHHHHHHcCCCEECCEEE
Confidence 3457999999 4 3444 5789999999999999999 57999999999999999999999999999999
Q ss_pred EEEEeCchhhhccCCCC
Q 006398 630 TATFMVPQTYEAKFPDS 646 (647)
Q Consensus 630 ~v~~~~~~~~~~~~~~~ 646 (647)
+|.|+.+......-|.|
T Consensus 81 ~V~~a~~~~~~~~gpss 97 (98)
T d1wf2a_ 81 DINLAAEPKVNRSGPSS 97 (98)
T ss_dssp EEEETTSCCCCSSSCCC
T ss_pred EEEECCCCCCCCCCCCC
Confidence 99999877665555543
No 77
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=2.3e-16 Score=130.64 Aligned_cols=83 Identities=14% Similarity=0.305 Sum_probs=77.5
Q ss_pred CCCCCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHH-hcCCccCCceEEEcc
Q 006398 253 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKP 331 (647)
Q Consensus 253 ~~~~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~-~~g~~~~g~~i~v~~ 331 (647)
..++++|||+|||+.+++++|.++|.+||.|..+.++.+..+|.++|||||+|.+.++|..||+ |||..|.|+.|.|.+
T Consensus 15 ~~ps~tl~V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~ 94 (102)
T d2cpxa1 15 GEPNKVLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEF 94 (102)
T ss_dssp CSCCSEEEEECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEEe
Confidence 3456899999999999999999999999999999999998899999999999999999999996 999999999999998
Q ss_pred Ccch
Q 006398 332 SEAE 335 (647)
Q Consensus 332 ~~~~ 335 (647)
+.+.
T Consensus 95 ak~k 98 (102)
T d2cpxa1 95 GKNK 98 (102)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 8653
No 78
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=1e-15 Score=121.30 Aligned_cols=78 Identities=27% Similarity=0.517 Sum_probs=71.7
Q ss_pred EEEcCCCCCCCHHHHHHhhccCCcEEE-EEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEeecCC
Q 006398 363 LYVGNLHFNMTEDQLRQVFEPFGTVEL-VQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQS 440 (647)
Q Consensus 363 l~v~nLp~~~~e~~l~~~f~~~G~v~~-v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~~~~ 440 (647)
|||+|||+.+++++|+++|++||.|.. +.|+.+ .+|.++|||||+|.+.++|..||..|+|..|+|+.|.|.++..+.
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~k~ 80 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKD 80 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCCCC
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecCCC
Confidence 799999999999999999999999855 467777 588899999999999999999999999999999999999987654
No 79
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=1.2e-15 Score=122.43 Aligned_cols=80 Identities=25% Similarity=0.473 Sum_probs=73.6
Q ss_pred CcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEeecC
Q 006398 360 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQ 439 (647)
Q Consensus 360 ~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~~~ 439 (647)
..+|||+|||+.+++++|+++|++||.|..+.|+.+..+ ++|||||+|.+.++|.+||+.|||..|+|+.|.|.++..+
T Consensus 8 ~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~-~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~~~ 86 (89)
T d1cvja2 8 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 86 (89)
T ss_dssp TTEEEEESCCSSCCHHHHHHHHHTTSCEEEEEECCBTTB-CCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECCCT
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEeecCC-CcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCC
Confidence 457999999999999999999999999999999887533 6899999999999999999999999999999999998765
Q ss_pred C
Q 006398 440 S 440 (647)
Q Consensus 440 ~ 440 (647)
.
T Consensus 87 ~ 87 (89)
T d1cvja2 87 K 87 (89)
T ss_dssp T
T ss_pred C
Confidence 4
No 80
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.59 E-value=1e-16 Score=129.07 Aligned_cols=78 Identities=14% Similarity=0.244 Sum_probs=72.4
Q ss_pred CCCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHHhcCCccCCceEEEccCc
Q 006398 255 DQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSE 333 (647)
Q Consensus 255 ~~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~~~g~~~~g~~i~v~~~~ 333 (647)
...+|||+|||+.+|+++|+++|..||.|..+.|+. ..+|.++|||||+|.+.++|..||+|||..|.|+.|.|.++.
T Consensus 12 ~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~~~v~~-~~~g~~kg~afv~F~~~e~a~~Al~~~g~~~~g~~i~V~~ak 89 (91)
T d1fjeb1 12 TPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVD-VRTGTNRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEKPK 89 (91)
T ss_dssp SSEEEEEECCCTTSCHHHHHHHHHHHHHHHTCCCCE-EEEETTTTEEEEEESSHHHHHHHHHGGGEEETTEEEEEECCC
T ss_pred CCcEEEEeCccCcchHHHHHHHHhcCCcEEEeeeee-cCCCCccEEeEEeeCCHHHHHHHHhcCCcEECCEEEEEEecC
Confidence 457999999999999999999999999999998865 457999999999999999999999999999999999998874
No 81
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.59 E-value=2.1e-15 Score=120.10 Aligned_cols=77 Identities=27% Similarity=0.514 Sum_probs=70.4
Q ss_pred EEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCC-CC---CcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEeec
Q 006398 363 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TG---HCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTD 438 (647)
Q Consensus 363 l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~-~g---~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~~ 438 (647)
|||+|||+.+++++|+++|++||.|..|.|+.+. ++ .++|||||+|.+.++|..|++.|||..|+|+.|.|.++..
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~~ 80 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISER 80 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSSC
T ss_pred CEEcCCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 7999999999999999999999999999998763 32 4689999999999999999999999999999999999854
Q ss_pred C
Q 006398 439 Q 439 (647)
Q Consensus 439 ~ 439 (647)
.
T Consensus 81 ~ 81 (85)
T d2cpfa1 81 A 81 (85)
T ss_dssp S
T ss_pred C
Confidence 3
No 82
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=1.8e-15 Score=122.05 Aligned_cols=81 Identities=21% Similarity=0.397 Sum_probs=70.4
Q ss_pred CcceEEeccCCCCCCCCchhhhhhHHHHHHHHhhhcCCeEEEEEeeC--CCccEEEEeCChHHHHHHHHHHcCceeCCeE
Q 006398 551 PSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD--SAGFVYLRFENTQSAFAAQRALHGRWFAGKM 628 (647)
Q Consensus 551 ~~~~l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~--~~G~afV~F~~~e~A~~A~~~lnG~~~~gr~ 628 (647)
|+++|||+|| |..+++ .+|.+.|..+|+.||.|..|.+... ++|+|||+|.+.++|..|+..|||..|.|++
T Consensus 2 P~~tl~V~nL--p~~~t~----~dl~~~l~~~f~~~G~i~~i~~~~~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~ 75 (91)
T d1nu4a_ 2 PNHTIYINNL--NEKIKK----DELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKP 75 (91)
T ss_dssp CCSEEEEESC--CTTSCH----HHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEE
T ss_pred CCCEEEEeCC--CCCCCH----HHHHHHHHHHhcccccccceEEeeeccCCCceEEEECCHHHHHHHHHHhCCCEECCEE
Confidence 5779999999 777662 3455677789999999999998553 5899999999999999999999999999999
Q ss_pred EEEEEeCch
Q 006398 629 ITATFMVPQ 637 (647)
Q Consensus 629 i~v~~~~~~ 637 (647)
|.|.|+...
T Consensus 76 l~v~~ak~~ 84 (91)
T d1nu4a_ 76 MRIQYAKTD 84 (91)
T ss_dssp CEEEECSSC
T ss_pred EEEEEeCCC
Confidence 999998753
No 83
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=1.5e-15 Score=118.85 Aligned_cols=75 Identities=17% Similarity=0.241 Sum_probs=68.0
Q ss_pred CcceEEeccCCCCCCCCchhhhhhHHHHHHHHhhhcCCeEEEEEeeCCCccEEEEeCChHHHHHHHHHHcCceeCCeEEE
Q 006398 551 PSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMIT 630 (647)
Q Consensus 551 ~~~~l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~~~G~afV~F~~~e~A~~A~~~lnG~~~~gr~i~ 630 (647)
.+++|||+|| + ++ +++|.++|+.||.|..|.+.+ .+|+|||+|.+.++|..|+..|||..|+|++|+
T Consensus 4 ~~~ti~V~~~--~--~t--------e~~L~~~F~~~G~I~~v~~~~-~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~ 70 (79)
T d2bz2a1 4 KGNTLYVYGE--D--MT--------PTLLRGAFSPFGNIIDLSMDP-PRNCAFVTYEKMESADQAVAELNGTQVESVQLK 70 (79)
T ss_dssp CCCEEEEECS--S--CC--------HHHHHHHHSTTCCCSCEEEET-TTTEEEEECSSHHHHHHHHHHHTTCBCSSCBCE
T ss_pred CCCEEEEECC--C--CC--------HHHHHHHHhccCccceeeecc-CCCEEEEEEcccHHHHHHHHHhCCCEECCEEEE
Confidence 5679999999 4 33 699999999999999999965 579999999999999999999999999999999
Q ss_pred EEEeCchh
Q 006398 631 ATFMVPQT 638 (647)
Q Consensus 631 v~~~~~~~ 638 (647)
|.|+.++.
T Consensus 71 V~~a~~~P 78 (79)
T d2bz2a1 71 VNIARKQP 78 (79)
T ss_dssp EEECCSSC
T ss_pred EEEecCCC
Confidence 99998764
No 84
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.58 E-value=2.1e-15 Score=120.17 Aligned_cols=80 Identities=28% Similarity=0.454 Sum_probs=70.2
Q ss_pred CCcEEEEcCCCCCCC-HHHHHHhhccCCcEEEEEeccC--CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEE
Q 006398 359 GARRLYVGNLHFNMT-EDQLRQVFEPFGTVELVQLPLD--ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSA 435 (647)
Q Consensus 359 ~~~~l~v~nLp~~~~-e~~l~~~f~~~G~v~~v~i~~~--~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~ 435 (647)
..++|||+|||+.++ +++|+++|++||.|..|.|+.. .++.++|||||+|.+.++|.+||+ |||..|+|+.|.|.+
T Consensus 3 e~~~l~V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~gr~l~V~~ 81 (86)
T d2ghpa3 3 EGREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLGNREISVSL 81 (86)
T ss_dssp TTTEEEEEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEETTEEEEEEE
T ss_pred CCCEEEEECCCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEECCEEEEEEE
Confidence 368999999999875 5679999999999999998775 488899999999999999999996 999999999999999
Q ss_pred eecC
Q 006398 436 VTDQ 439 (647)
Q Consensus 436 ~~~~ 439 (647)
+..+
T Consensus 82 a~~k 85 (86)
T d2ghpa3 82 ADKK 85 (86)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 8764
No 85
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=3.6e-15 Score=118.34 Aligned_cols=78 Identities=21% Similarity=0.254 Sum_probs=73.7
Q ss_pred CcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEeec
Q 006398 360 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTD 438 (647)
Q Consensus 360 ~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~~ 438 (647)
.++|||+|||+.+++++|.++|+.||.|..|.|..+.+|.++|||||+|.+.++|.+||+ ++|..|.|+.|.|.+..+
T Consensus 6 ~rtvfV~nlp~~~te~~l~~~F~~~G~v~~v~l~~~~~~~~kG~afV~f~~~e~a~~al~-~~~~~~~g~~l~v~~~~d 83 (85)
T d1zh5a2 6 NRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVE-TPGQKYKETDLLILFKDD 83 (85)
T ss_dssp TTEEEEECCCTTCCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHT-CCCCEETTEECEEEEGGG
T ss_pred cCEEEEECCCCCCCHHHHHHHHHHhcccccceeeeeccCCcceEEEEEEcCHHHHHHHHH-HCCCEECCEEEEEEEcCC
Confidence 578999999999999999999999999999999988899999999999999999999996 699999999999998655
No 86
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.58 E-value=1.5e-15 Score=117.33 Aligned_cols=74 Identities=16% Similarity=0.213 Sum_probs=68.6
Q ss_pred CeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHHhcCCccCCceEEEccC
Q 006398 257 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPS 332 (647)
Q Consensus 257 ~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~~~g~~~~g~~i~v~~~ 332 (647)
.+|||+|||+.+++++|+++|..||.|..|.++.++.. .+|||||+|.+.++|.+||.+++..|+|+.|.|..+
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~~~--~~~~afV~F~~~~~a~~Al~~~~~~i~g~~i~V~~~ 74 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLKK--NFRFARIEFARYDGALAAITKTHKVVGQNEIIVSHL 74 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGSCEEEEEEEECTTS--SSEEEEEEESSHHHHHHHHTTTTCEETTEECEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCCceEEEEEEeeccc--cceEEEEEEcchHHhHHHHHhcCcEECCEEEEEEEC
Confidence 37999999999999999999999999999999998864 457999999999999999999999999999999754
No 87
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=2.1e-15 Score=124.96 Aligned_cols=82 Identities=15% Similarity=0.124 Sum_probs=75.2
Q ss_pred CCCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHHhcCCccCCceEEEccCcc
Q 006398 255 DQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEA 334 (647)
Q Consensus 255 ~~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~~~g~~~~g~~i~v~~~~~ 334 (647)
...+|||+|||+.+|+++|+++|..||.|..+.++.+..++..+|||||+|.+.++|++||++++..|+|+.|.|.++..
T Consensus 14 ~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~~~~~~i~gR~i~V~~~~~ 93 (104)
T d1wg5a_ 14 NDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSR 93 (104)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHTTTTCCSSSSCCEEEEECT
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHhhCCCEEcceEEEEEECCH
Confidence 44689999999999999999999999999988788888889999999999999999999999999999999999988765
Q ss_pred hh
Q 006398 335 EK 336 (647)
Q Consensus 335 ~~ 336 (647)
..
T Consensus 94 ~~ 95 (104)
T d1wg5a_ 94 AE 95 (104)
T ss_dssp TT
T ss_pred HH
Confidence 43
No 88
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=3.2e-15 Score=119.77 Aligned_cols=78 Identities=21% Similarity=0.245 Sum_probs=68.6
Q ss_pred CCCcceEEeccCCCCCCCCchhhhhhHHHHHHHHhhhcCCeEEEEE-eeCCCccEEEEeCChHHHHHHHHHHcCcee-CC
Q 006398 549 GVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFV-EKDSAGFVYLRFENTQSAFAAQRALHGRWF-AG 626 (647)
Q Consensus 549 ~~~~~~l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i-~~~~~G~afV~F~~~e~A~~A~~~lnG~~~-~g 626 (647)
.+|+++|||+|| |..++ +++|.++|+.||.|..+.+ ...++|+|||+|.+.++|..|+..|||..| .|
T Consensus 7 ~pPs~tL~V~NL--p~~~t--------e~~l~~~F~~~G~v~~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g 76 (88)
T d2adca2 7 FPPSATLHLSNI--PPSVS--------EEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGEN 76 (88)
T ss_dssp CCSCSEEEEECC--CTTCC--------HHHHHHHHHTTSCCEEEEEECSSSTTCEEEEESSHHHHHHHHHHHTTCBSSSS
T ss_pred CCCCCEEEEECC--CCCCC--------HHHHHHHhhccCCEEEEEEeeecccceeEEEECCHHHHHHHHHhccCCEecCC
Confidence 457889999999 77777 7999999999999987765 444689999999999999999999999998 48
Q ss_pred eEEEEEEeCc
Q 006398 627 KMITATFMVP 636 (647)
Q Consensus 627 r~i~v~~~~~ 636 (647)
++|+|+|+-.
T Consensus 77 ~~l~v~~sk~ 86 (88)
T d2adca2 77 HHLRVSFSKS 86 (88)
T ss_dssp CBCEEEECSS
T ss_pred CEEEEEeCCC
Confidence 9999999753
No 89
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.58 E-value=1.7e-15 Score=120.51 Aligned_cols=76 Identities=26% Similarity=0.442 Sum_probs=69.3
Q ss_pred CcceEEeccCCCCCCCCchhhhhhHHHHHHHHhhhcCCeEEEEEeeCCCccEEEEeCChHHHHHHHHHHcCceeCCeEEE
Q 006398 551 PSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMIT 630 (647)
Q Consensus 551 ~~~~l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~~~G~afV~F~~~e~A~~A~~~lnG~~~~gr~i~ 630 (647)
..+.|||+|| |..++ +++|.++|+.||.|..|.+.+ .+|+|||+|.+.++|..|+..|||..|.|++|+
T Consensus 7 ~~~~l~V~nL--p~~~~--------~~~l~~~F~~~G~i~~i~~~~-~k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~ 75 (86)
T d2cpja1 7 QRSRLFVGNL--PPDIT--------EEEMRKLFEKYGKAGEVFIHK-DKGFGFIRLETRTLAEIAKVELDNMPLRGKQLR 75 (86)
T ss_dssp CTTEEEEESC--CTTCC--------HHHHHHHTSTTCCCSEEEEET-TTTEEEEECSSSHHHHHHHHHHTTCCBTTBCCE
T ss_pred CCCEEEEECC--CCCCC--------HHHHHHHHHHhCCceEeeeec-ccceEEEEECCHHHHHHHHHHhCCCEECCEEEE
Confidence 3457999999 77777 699999999999999999965 589999999999999999999999999999999
Q ss_pred EEEeCch
Q 006398 631 ATFMVPQ 637 (647)
Q Consensus 631 v~~~~~~ 637 (647)
|+||...
T Consensus 76 V~~A~~~ 82 (86)
T d2cpja1 76 VRFACHS 82 (86)
T ss_dssp EEESSCC
T ss_pred EEECCCc
Confidence 9998764
No 90
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=4e-15 Score=120.96 Aligned_cols=77 Identities=19% Similarity=0.336 Sum_probs=69.8
Q ss_pred CCcceEEeccCCCCCCCCchhhhhhHHHHHHHHhhhcCCeEEEEEeeC--CCccEEEEeCChHHHHHHHHHHcCceeCCe
Q 006398 550 VPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD--SAGFVYLRFENTQSAFAAQRALHGRWFAGK 627 (647)
Q Consensus 550 ~~~~~l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~--~~G~afV~F~~~e~A~~A~~~lnG~~~~gr 627 (647)
.+.++|||+|| |..++ +++|.++|+.||.|..+.+... ++|+|||+|.+.++|..|++.|||..|.|+
T Consensus 12 ~~~~~l~V~nL--p~~~t--------~~~l~~~F~~~G~v~~~~~~~~~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~ 81 (95)
T d1x4aa1 12 NNDCRIYVGNL--PPDIR--------TKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGY 81 (95)
T ss_dssp CCSSEEEEESC--CTTCC--------HHHHHHHHGGGSCEEEEEECCSSSSSCCEEEEESCHHHHHHHHHHHTTCEETTE
T ss_pred CCCCEEEEECC--CCCCC--------HHHHHHHHhcCCceEEEEecccccccceEEEEECCHHHHHHHHHHhCCCEECCE
Confidence 45668999999 88877 7999999999999999988543 689999999999999999999999999999
Q ss_pred EEEEEEeCc
Q 006398 628 MITATFMVP 636 (647)
Q Consensus 628 ~i~v~~~~~ 636 (647)
+|+|+|+.+
T Consensus 82 ~l~V~~a~~ 90 (95)
T d1x4aa1 82 RLRVEFPRS 90 (95)
T ss_dssp ECEEECCCC
T ss_pred EEEEEeccC
Confidence 999999864
No 91
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=6.7e-15 Score=119.62 Aligned_cols=83 Identities=24% Similarity=0.395 Sum_probs=74.2
Q ss_pred CCCCCCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEE
Q 006398 355 PYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVS 434 (647)
Q Consensus 355 ~~~~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~ 434 (647)
+...+.++|||+|||+.+++++|+++|..||.|..+.+..+ +.++|||||+|.+.++|..||+.|||..|.|+.|.|.
T Consensus 9 p~~~~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~--~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~ 86 (95)
T d1x4aa1 9 PAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNR--RGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVE 86 (95)
T ss_dssp CCCCCSSEEEEESCCTTCCHHHHHHHHGGGSCEEEEEECCS--SSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEE
T ss_pred CCCCCCCEEEEECCCCCCCHHHHHHHHhcCCceEEEEeccc--ccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEE
Confidence 34455678999999999999999999999999999988665 3458999999999999999999999999999999999
Q ss_pred EeecC
Q 006398 435 AVTDQ 439 (647)
Q Consensus 435 ~~~~~ 439 (647)
|+...
T Consensus 87 ~a~~~ 91 (95)
T d1x4aa1 87 FPRSG 91 (95)
T ss_dssp CCCCC
T ss_pred eccCC
Confidence 98754
No 92
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=1.9e-15 Score=120.74 Aligned_cols=84 Identities=21% Similarity=0.313 Sum_probs=71.3
Q ss_pred CcceEEeccCCCCCCCCchhhhhhHHHHHHHHhhhcCCeEEEEEeeCCCccEEEEeCChHHHHHHHHHHcCceeCCeEEE
Q 006398 551 PSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMIT 630 (647)
Q Consensus 551 ~~~~l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~~~G~afV~F~~~e~A~~A~~~lnG~~~~gr~i~ 630 (647)
.+++|||+|| |...+ ++||.++|..|| +..+.+ ...+|+|||+|.++++|+.|+..|||..|.|++|.
T Consensus 4 ~s~~i~V~nL--p~~~t--------~~~l~~lF~~~G-~~~~~~-~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~ 71 (88)
T d1wg1a_ 4 GSSGILVKNL--PQDSN--------CQEVHDLLKDYD-LKYCYV-DRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLI 71 (88)
T ss_dssp CCCCEEEESC--CSSCC--------HHHHHHHTCSSC-CCCEEE-EGGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEE
T ss_pred CCCEEEEeCC--CCccC--------hHHHHHHHHhcC-ceeeee-eccCCceEEEECCHHHHHHHHHHhCCCEECCEEEE
Confidence 4668999999 87777 799999999999 333444 33689999999999999999999999999999999
Q ss_pred EEEeCchhhhccCCCC
Q 006398 631 ATFMVPQTYEAKFPDS 646 (647)
Q Consensus 631 v~~~~~~~~~~~~~~~ 646 (647)
|+|+........-|.|
T Consensus 72 V~~a~~~~~~~~~pss 87 (88)
T d1wg1a_ 72 VQLQPTDALLCSGPSS 87 (88)
T ss_dssp EEECCCCCCCSCCCTT
T ss_pred EEEcCCCCCCCCCCCC
Confidence 9999887766555543
No 93
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=1.4e-15 Score=117.67 Aligned_cols=74 Identities=30% Similarity=0.619 Sum_probs=68.7
Q ss_pred EEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEe
Q 006398 362 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAV 436 (647)
Q Consensus 362 ~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~ 436 (647)
+|||+|||+.+++++|.++|++||.|..|.|+.+ .++.++|||||+|.+.++|.+||+ +++..|+|+.|.|..|
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPKRA 75 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEECCC
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEeeEC
Confidence 4899999999999999999999999999999998 588999999999999999999998 6888899999998653
No 94
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=4e-15 Score=125.65 Aligned_cols=79 Identities=20% Similarity=0.412 Sum_probs=73.1
Q ss_pred CCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEeec
Q 006398 359 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTD 438 (647)
Q Consensus 359 ~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~~ 438 (647)
.+++|||+|||..+++++|.++|++||.|..|.+..+ +.++|||||+|.+.++|..|+..|||..|+|+.|.|.++..
T Consensus 6 ~~r~l~V~nLp~~~te~~l~~~F~~~G~v~~i~~~~~--~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~a~~ 83 (114)
T d2f9da1 6 VNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNT--PETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNA 83 (114)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEECS--TTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhhcCCeEeeccccc--CCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 4689999999999999999999999999999999865 45689999999999999999999999999999999999865
Q ss_pred C
Q 006398 439 Q 439 (647)
Q Consensus 439 ~ 439 (647)
.
T Consensus 84 ~ 84 (114)
T d2f9da1 84 N 84 (114)
T ss_dssp H
T ss_pred C
Confidence 4
No 95
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=3.8e-16 Score=120.13 Aligned_cols=70 Identities=19% Similarity=0.376 Sum_probs=67.4
Q ss_pred EEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHH-hcCCccCCceEE
Q 006398 259 VFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVM 328 (647)
Q Consensus 259 v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~-~~g~~~~g~~i~ 328 (647)
|||+|||+++|+++|.++|.+||.|..+.++.++.++.++|||||+|.+.++|..|++ |||..|.|+.|+
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred CEEeCCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 7999999999999999999999999999999999999999999999999999999996 999999998764
No 96
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.58 E-value=1.5e-15 Score=123.82 Aligned_cols=80 Identities=16% Similarity=0.241 Sum_probs=72.4
Q ss_pred CCCcceEEeccCCCCCCCCchhhhhhHHHHHHHHhhhcCCeEEEEEeeCCCccEEEEeCChHHHHHHHHHHcCceeCCeE
Q 006398 549 GVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKM 628 (647)
Q Consensus 549 ~~~~~~l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~~~G~afV~F~~~e~A~~A~~~lnG~~~~gr~ 628 (647)
..++++|||+|| |..++ +++|.++|+.||.|..+.....++|+|||+|.+.++|..|+..|||..|.|++
T Consensus 13 ~~~~~~l~V~nL--~~~~t--------e~~l~~~F~~~g~v~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~ 82 (96)
T d1fjca_ 13 VRAARTLLAKNL--SFNIT--------EDELKEVFEDALEIRLVSQDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRS 82 (96)
T ss_dssp TTGGGEEEEESC--CSSCC--------HHHHHHHHCSEEEECCEEETTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEE
T ss_pred CCCCCEEEEeCC--CCCCC--------HHHHHHHHHhcccceeeeecCccccEEEEEeCCHHHHHHHHHHcCCCEECCEE
Confidence 346789999999 87877 69999999999999888776667899999999999999999999999999999
Q ss_pred EEEEEeCchh
Q 006398 629 ITATFMVPQT 638 (647)
Q Consensus 629 i~v~~~~~~~ 638 (647)
|.|.|+.+..
T Consensus 83 i~V~~a~~k~ 92 (96)
T d1fjca_ 83 VSLYYTGEKG 92 (96)
T ss_dssp EEEEECSSSC
T ss_pred EEEEEeCCCC
Confidence 9999998753
No 97
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=1e-15 Score=126.92 Aligned_cols=81 Identities=35% Similarity=0.613 Sum_probs=75.5
Q ss_pred CcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEeec
Q 006398 360 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTD 438 (647)
Q Consensus 360 ~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~~ 438 (647)
.++|||+|||+.+++++|+++|++||.|..|.|+.+ .+|.++|||||+|.+.++|..|++.|+|..|.|+.|.|.++..
T Consensus 8 ~rtl~V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a~~ 87 (104)
T d1p1ta_ 8 LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAAS 87 (104)
T ss_dssp HSCEEEESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEETTC
T ss_pred CCEEEEECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCC
Confidence 468999999999999999999999999999999887 5889999999999999999999999999999999999999765
Q ss_pred CC
Q 006398 439 QS 440 (647)
Q Consensus 439 ~~ 440 (647)
..
T Consensus 88 ~~ 89 (104)
T d1p1ta_ 88 EK 89 (104)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 98
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.57 E-value=6.4e-16 Score=123.91 Aligned_cols=75 Identities=19% Similarity=0.310 Sum_probs=68.8
Q ss_pred CCCeEEEecCCCCCCHHHH---HHHHHhcCCeeEEEEeeeCCCCCcc---cEEEEEecccccHHHHHH-hcCCccCCceE
Q 006398 255 DQRTVFAYQICLKADERDV---YEFFSRAGKVRDVRLIMDRNSRRSK---GVGYVEFYDVMSVPMAIA-LSGQPLLGQPV 327 (647)
Q Consensus 255 ~~~~v~v~~Lp~~~t~~~l---~~~f~~~G~i~~v~~~~~~~tg~~~---g~afV~f~~~~~a~~al~-~~g~~~~g~~i 327 (647)
+.++|||+|||+.+++++| .++|.+||.|..|.|+.++.++.++ |||||+|.+.++|..|++ |||..|.|+.|
T Consensus 7 q~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~l 86 (89)
T d2cpia1 7 QKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTL 86 (89)
T ss_dssp CSSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEEE
T ss_pred ecCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEEE
Confidence 3468999999999999999 6789999999999999998776554 999999999999999997 99999999999
Q ss_pred EE
Q 006398 328 MV 329 (647)
Q Consensus 328 ~v 329 (647)
+|
T Consensus 87 kv 88 (89)
T d2cpia1 87 KA 88 (89)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 99
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=6.6e-15 Score=115.37 Aligned_cols=76 Identities=24% Similarity=0.541 Sum_probs=71.0
Q ss_pred CcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEe
Q 006398 360 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAV 436 (647)
Q Consensus 360 ~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~ 436 (647)
.++|||+|||+.+++++|+++|++||.|..+.++.+ .++.++|||||+|.+.++|.+|++ ++|..|+|+.|.|..|
T Consensus 2 ~r~lfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 2 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKA 78 (79)
T ss_dssp CSEEEEECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCCEETTEECEEEEC
T ss_pred CCEEEECCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEEC
Confidence 478999999999999999999999999999999887 588899999999999999999986 7999999999999876
No 100
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=3.3e-15 Score=119.10 Aligned_cols=77 Identities=22% Similarity=0.341 Sum_probs=69.3
Q ss_pred CcceEEeccCCCCCCCCchhhhhhHHHHHHHHhhhcCCeEEEEEeeCCCccEEEEeCChHHHHHHHHHHcCceeCCeEEE
Q 006398 551 PSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMIT 630 (647)
Q Consensus 551 ~~~~l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~~~G~afV~F~~~e~A~~A~~~lnG~~~~gr~i~ 630 (647)
..++|||+|| |..++ +++|.++|+.||.|..+.+. .++|+|||+|.++++|..|+..|||..|+|++|.
T Consensus 7 ~~k~l~V~nL--p~~~t--------e~~l~~~F~~~g~i~~~~~~-~~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~ 75 (86)
T d2cpda1 7 SVKILYVRNL--MLSTS--------EEMIEKEFNNIKPGAVERVK-KIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIE 75 (86)
T ss_dssp CCCEEEEESC--CTTCC--------HHHHHHHHHTTSTTCEEEEE-ECSSEEEEEESSHHHHHHHHHHHSSEEETTEEEE
T ss_pred CCCEEEEcCC--CCCCC--------HHHHHHhhcccceeeeEEEc-cccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEE
Confidence 3468999999 87877 69999999999999888874 4789999999999999999999999999999999
Q ss_pred EEEeCchh
Q 006398 631 ATFMVPQT 638 (647)
Q Consensus 631 v~~~~~~~ 638 (647)
|.|+-|..
T Consensus 76 V~~akP~~ 83 (86)
T d2cpda1 76 VTLAKPVD 83 (86)
T ss_dssp EECCCCCC
T ss_pred EEeccCCC
Confidence 99987653
No 101
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=3.4e-15 Score=122.84 Aligned_cols=80 Identities=28% Similarity=0.561 Sum_probs=74.1
Q ss_pred CcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEeec
Q 006398 360 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTD 438 (647)
Q Consensus 360 ~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~~ 438 (647)
.++|||+|||+.+++++|.++|.+||.|..+.|+.+ .++.++|||||+|.+.++|.+||+ +++..|+|+.|.|.+|.+
T Consensus 20 ~~~lfVgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~~l~G~~i~V~~a~~ 98 (103)
T d1x4ba1 20 FRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGRVVEPKRAVA 98 (103)
T ss_dssp HTEEEEECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSEEETTEEEEEECCSS
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEECcc
Confidence 478999999999999999999999999999999988 577899999999999999999996 688999999999999886
Q ss_pred CC
Q 006398 439 QS 440 (647)
Q Consensus 439 ~~ 440 (647)
+.
T Consensus 99 ke 100 (103)
T d1x4ba1 99 RE 100 (103)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 102
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.57 E-value=7.7e-16 Score=119.57 Aligned_cols=75 Identities=27% Similarity=0.513 Sum_probs=70.5
Q ss_pred cEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEe
Q 006398 361 RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAV 436 (647)
Q Consensus 361 ~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~ 436 (647)
++|||+|||+.+++++|.++|++||.|..+.|+.+ .+|.++|||||+|.+.++|.+||+ +++..|+|+.|.|..|
T Consensus 1 cklfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 46999999999999999999999999999999998 579999999999999999999998 6999999999999876
No 103
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.57 E-value=6.2e-15 Score=120.94 Aligned_cols=83 Identities=30% Similarity=0.565 Sum_probs=75.4
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcC------CceecCeE
Q 006398 358 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNG------QLEIVGRA 430 (647)
Q Consensus 358 ~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~------g~~~~g~~ 430 (647)
...++|||+|||+.+++++|+++|++||.|..+.++.+ .++.++|||||+|.+.++|..||+.|+ |..|.|+.
T Consensus 6 ~~~~tlfV~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~gr~ 85 (98)
T d1x4ha1 6 TEGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGRQ 85 (98)
T ss_dssp CCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSSCE
T ss_pred CCCCEEEEcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECCEE
Confidence 34678999999999999999999999999999999888 578889999999999999999999876 67899999
Q ss_pred EEEEEeecCC
Q 006398 431 IKVSAVTDQS 440 (647)
Q Consensus 431 i~v~~~~~~~ 440 (647)
|.|.++.++.
T Consensus 86 l~v~~a~~k~ 95 (98)
T d1x4ha1 86 LKVDLAVTRD 95 (98)
T ss_dssp EEEECCCCCC
T ss_pred EEEEECCCCC
Confidence 9999988754
No 104
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.57 E-value=4e-16 Score=125.62 Aligned_cols=81 Identities=26% Similarity=0.366 Sum_probs=74.3
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEe
Q 006398 357 SGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAV 436 (647)
Q Consensus 357 ~~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~ 436 (647)
.....+|||+|||+.+++++|+++|+.||.|..+.|+...+|.++|||||+|.+.++|.+||+ |+|..|+|+.|.|.++
T Consensus 10 ~~~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~~~v~~~~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~~g~~i~V~~a 88 (91)
T d1fjeb1 10 STTPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVDVRTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKLEKP 88 (91)
T ss_dssp CSSSEEEEEECCCTTSCHHHHHHHHHHHHHHHTCCCCEEEEETTTTEEEEEESSHHHHHHHHH-GGGEEETTEEEEEECC
T ss_pred CCCCcEEEEeCccCcchHHHHHHHHhcCCcEEEeeeeecCCCCccEEeEEeeCCHHHHHHHHh-cCCcEECCEEEEEEec
Confidence 345679999999999999999999999999988888766788999999999999999999996 8999999999999998
Q ss_pred ec
Q 006398 437 TD 438 (647)
Q Consensus 437 ~~ 438 (647)
..
T Consensus 89 k~ 90 (91)
T d1fjeb1 89 KG 90 (91)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 105
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=4.1e-15 Score=120.90 Aligned_cols=76 Identities=26% Similarity=0.475 Sum_probs=71.8
Q ss_pred CcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEeecC
Q 006398 360 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQ 439 (647)
Q Consensus 360 ~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~~~ 439 (647)
.++|||+|||..+++++|+++|++||.|..|.|+.+ +|||||+|.+.++|.+|+..|+|..|.|+.|+|.|+...
T Consensus 18 ~~~l~v~nL~~~~te~~L~~~F~~fG~i~~v~i~~~-----kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~ak~~ 92 (96)
T d1x4ga1 18 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE-----KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 92 (96)
T ss_dssp CCEEEEECCSSCCCHHHHHHHHHHHSCEEEEEEETT-----TTEEEEEESSHHHHHHHHHHHTTCEETTEECEEECCCCC
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHhCCceEEEEEec-----ceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCC
Confidence 578999999999999999999999999999999976 899999999999999999999999999999999998765
Q ss_pred C
Q 006398 440 S 440 (647)
Q Consensus 440 ~ 440 (647)
.
T Consensus 93 p 93 (96)
T d1x4ga1 93 P 93 (96)
T ss_dssp C
T ss_pred C
Confidence 4
No 106
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=6.6e-15 Score=121.44 Aligned_cols=84 Identities=27% Similarity=0.404 Sum_probs=74.6
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHhhccCCcEE--------EEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecC
Q 006398 358 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVE--------LVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVG 428 (647)
Q Consensus 358 ~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~--------~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g 428 (647)
....+|||+|||+.+++++|.++|..||.|. .+.+..+ .+|.++|||||+|.+.++|.+||+.|+|..|+|
T Consensus 6 ~~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~~g 85 (101)
T d2cpea1 6 SDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQG 85 (101)
T ss_dssp CCCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEETT
T ss_pred CCCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEECC
Confidence 3468999999999999999999999999874 4455555 478889999999999999999999999999999
Q ss_pred eEEEEEEeecCCC
Q 006398 429 RAIKVSAVTDQSG 441 (647)
Q Consensus 429 ~~i~v~~~~~~~~ 441 (647)
+.|.|.++..+..
T Consensus 86 r~i~V~~a~~~~p 98 (101)
T d2cpea1 86 SKLKVSLARKKPP 98 (101)
T ss_dssp EECEEECSSCCCC
T ss_pred EEEEEEEcCCCCC
Confidence 9999999987653
No 107
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=1.3e-15 Score=126.19 Aligned_cols=82 Identities=16% Similarity=0.170 Sum_probs=73.8
Q ss_pred CCCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHHhcCCccCCceEEEccCcc
Q 006398 255 DQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEA 334 (647)
Q Consensus 255 ~~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~~~g~~~~g~~i~v~~~~~ 334 (647)
...+|||+|||+.+|+++|.++|..||.|..+.++....+|.++|||||+|.+.++|+.||++|+..|.|+.|.|.++..
T Consensus 7 ~~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~~n~~~i~gr~i~V~~~~~ 86 (103)
T d2cpya1 7 AKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTL 86 (103)
T ss_dssp CCCEEEEESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGGGCSEEETTEEEEEEEECH
T ss_pred CceEEEEeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHhcCCCeECCcEEEEEECCH
Confidence 44689999999999999999999999999876666666789999999999999999999999999999999999988754
Q ss_pred hh
Q 006398 335 EK 336 (647)
Q Consensus 335 ~~ 336 (647)
..
T Consensus 87 ~~ 88 (103)
T d2cpya1 87 ED 88 (103)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 108
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=1.4e-15 Score=127.78 Aligned_cols=84 Identities=20% Similarity=0.298 Sum_probs=76.0
Q ss_pred CCCCCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHHhcCCccCCceEEEccC
Q 006398 253 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPS 332 (647)
Q Consensus 253 ~~~~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~~~g~~~~g~~i~v~~~ 332 (647)
....++|||+|||+.+|+++|.++|+.||.|..+.++.+..+|.++|||||+|.+.++|.+||++||..|+|+.|.|.++
T Consensus 15 ~~~~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~~~~~~i~gR~i~V~~~ 94 (112)
T d1wela1 15 HEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPI 94 (112)
T ss_dssp CCCCCEEEEECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHTSCSBCSTTSCBEEEEE
T ss_pred CCCCeEEEEecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHHcCCCcCCCEEEEEEEc
Confidence 33567999999999999999999999999998877777778899999999999999999999999999999999999877
Q ss_pred cchh
Q 006398 333 EAEK 336 (647)
Q Consensus 333 ~~~~ 336 (647)
....
T Consensus 95 ~~~~ 98 (112)
T d1wela1 95 TKKG 98 (112)
T ss_dssp CHHH
T ss_pred ChHH
Confidence 5443
No 109
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=3.3e-15 Score=123.12 Aligned_cols=80 Identities=21% Similarity=0.235 Sum_probs=71.6
Q ss_pred CCCCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHHhcCCccCCceEEEccCc
Q 006398 254 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSE 333 (647)
Q Consensus 254 ~~~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~~~g~~~~g~~i~v~~~~ 333 (647)
....+|||+|||+++|+++|+++|..||. ..|.++.+.. |..+|||||+|.+.++|+.||++|+..|.|+.|.|.++.
T Consensus 13 ~~~~~v~v~nLp~~~te~dl~~~F~~~~~-~~v~~~~~~~-g~~~G~afVeF~~~~~a~~Al~~~~~~i~gR~I~V~~s~ 90 (102)
T d1weza_ 13 TTGHCVHMRGLPYRATENDIYNFFSPLNP-MRVHIEIGPD-GRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNS 90 (102)
T ss_dssp SSSCEEEEESCCTTCCHHHHHHSSCSCCC-SEEEEEESSS-SCEEEEEEEECSSSHHHHHHHTTSSCCSSSSCCEEEEEC
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHhccCc-ceeeeEEecC-CcceEEEEEEECCHHHHHHHHHcCCCEECCEEEEEEEcC
Confidence 34579999999999999999999999984 5788887764 889999999999999999999999999999999998765
Q ss_pred ch
Q 006398 334 AE 335 (647)
Q Consensus 334 ~~ 335 (647)
..
T Consensus 91 ~~ 92 (102)
T d1weza_ 91 TA 92 (102)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 110
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=7.5e-15 Score=117.51 Aligned_cols=79 Identities=19% Similarity=0.310 Sum_probs=70.1
Q ss_pred CCCcceEEeccCCCCCCCCchhhhhhHHHHHHHHhhhcCCeEEEEEeeCCCccEEEEeCChHHHHHHHHHH--cCceeCC
Q 006398 549 GVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRAL--HGRWFAG 626 (647)
Q Consensus 549 ~~~~~~l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~~~G~afV~F~~~e~A~~A~~~l--nG~~~~g 626 (647)
++|+++|||+|| |..++ +++|.++|+.||.|..|.+.+ .+|+|||+|.+.++|..|+..| ++..|+|
T Consensus 5 ~~Ps~~l~V~nL--p~~~t--------~~~L~~~f~~~G~i~~v~~~~-~~~~afV~f~~~e~A~~a~~~~~~~~~~~~g 73 (88)
T d2cq1a1 5 GAPSRVLHIRKL--PGEVT--------ETEVIALGLPFGKVTNILMLK-GKNQAFLELATEEAAITMVNYYSAVTPHLRN 73 (88)
T ss_dssp SSCCSEEEEESC--CTTCC--------HHHHHHTTTTTSCEEEEEEET-TTTEEEEEESSHHHHHHHHHHHHHSCCEETT
T ss_pred CCCCCEEEEeCC--CCCCC--------HHHHHHHHhcccccccccccc-cceEEEEEeCCHHHHHHHHHHHccCCCccCC
Confidence 568999999999 77777 799999999999999999865 5799999999999999999976 5678999
Q ss_pred eEEEEEEeCchh
Q 006398 627 KMITATFMVPQT 638 (647)
Q Consensus 627 r~i~v~~~~~~~ 638 (647)
++|+|.|+...+
T Consensus 74 ~~l~v~~sk~~~ 85 (88)
T d2cq1a1 74 QPIYIQYSNHKE 85 (88)
T ss_dssp EECEEEECSCSS
T ss_pred CEEEEEECCCCC
Confidence 999999986544
No 111
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.55 E-value=3e-15 Score=116.19 Aligned_cols=74 Identities=28% Similarity=0.509 Sum_probs=69.7
Q ss_pred EEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEe
Q 006398 362 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAV 436 (647)
Q Consensus 362 ~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~ 436 (647)
+|||+|||+.+++++|+++|+.||.|..+.++.+ .++.++|||||+|.+.++|.+|++ ++|..|+|+.|.|.+|
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEEC
Confidence 4899999999999999999999999999988887 578899999999999999999997 9999999999999875
No 112
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.55 E-value=9e-15 Score=112.86 Aligned_cols=73 Identities=21% Similarity=0.370 Sum_probs=65.4
Q ss_pred EEeccCCCCCCCCchhhhhhHHHHHHHHhhhcCCeEEEEEeeCCCccEEEEeCChHHHHHHHHHHcCceeCCeEEEEEEe
Q 006398 555 LLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFM 634 (647)
Q Consensus 555 l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~~~G~afV~F~~~e~A~~A~~~lnG~~~~gr~i~v~~~ 634 (647)
|||+|| |...+ +++|.++|++|| +..+.+. .++|+|||+|.+.++|..|+..|||..|.|++|.|+|+
T Consensus 1 i~V~nL--p~~~t--------~~~l~~~F~~~g-~~~~~~~-~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a 68 (75)
T d1wi6a1 1 ILIRGL--PGDVT--------NQEVHDLLSDYE-LKYCFVD-KYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQ 68 (75)
T ss_dssp EEEECC--CTTCC--------HHHHHHHTTTSC-EEEEEEE-TTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEEC
T ss_pred CEEeCC--CCcCC--------HHHHHHHHhccc-ccceeec-ccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEe
Confidence 799999 87877 799999999999 6666664 47899999999999999999999999999999999999
Q ss_pred Cchhh
Q 006398 635 VPQTY 639 (647)
Q Consensus 635 ~~~~~ 639 (647)
+.+.+
T Consensus 69 ~~d~~ 73 (75)
T d1wi6a1 69 PTDAL 73 (75)
T ss_dssp CSTTC
T ss_pred CCCCc
Confidence 87653
No 113
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=2.9e-15 Score=119.83 Aligned_cols=82 Identities=16% Similarity=0.265 Sum_probs=73.3
Q ss_pred CcceEEeccCCCCCCCCchhhhhhHHHHHHHHhhhcCCeEEEEEeeCCCccEEEEeCChHHHHHHHHHHcCceeCCeEEE
Q 006398 551 PSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMIT 630 (647)
Q Consensus 551 ~~~~l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~~~G~afV~F~~~e~A~~A~~~lnG~~~~gr~i~ 630 (647)
.+++|||+|| |..++ +++|.++|++||.|..|+++..++|||||+|.++++|+.|+. ++..|.|++|.
T Consensus 4 ~s~~lfV~nL--p~~~t--------e~~L~~~F~~~G~v~~v~~~~~~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~ 71 (88)
T d1wf0a_ 4 GSSGVFVGRC--TGDMT--------EDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSLCG--EDLIIKGISVH 71 (88)
T ss_dssp CCCEEEEESC--CSSSC--------HHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHTTT--CEEEETTEEEE
T ss_pred CCCEEEEeCC--CCCCC--------HHHHHHHHHHcCCceEEEEeeccCceEEEEECCHHHHHHHHh--CCCEECCEEeE
Confidence 5779999999 88877 799999999999999999988899999999999999999985 89999999999
Q ss_pred EEEeCchhhhccCC
Q 006398 631 ATFMVPQTYEAKFP 644 (647)
Q Consensus 631 v~~~~~~~~~~~~~ 644 (647)
|.++.+..-...-|
T Consensus 72 v~~a~~k~~~~~~~ 85 (88)
T d1wf0a_ 72 ISNAEPKHNSNSGP 85 (88)
T ss_dssp EECCCCCCCCCSCS
T ss_pred EEeCCCCCCCCCCc
Confidence 99998766544433
No 114
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.55 E-value=9e-15 Score=115.57 Aligned_cols=76 Identities=21% Similarity=0.260 Sum_probs=69.6
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceec-CeEEEEEEe
Q 006398 358 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIV-GRAIKVSAV 436 (647)
Q Consensus 358 ~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~-g~~i~v~~~ 436 (647)
+++++|||+|||..+++++|.++|+.||.|..|.++.+ .+|||||+|.+.++|..|+..|+|..|. |+.|.|.|+
T Consensus 6 pP~~tl~V~nLp~~~t~~~l~~~f~~~G~i~~v~~~~~----~~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v~~a 81 (83)
T d2b0ga1 6 PPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPN----RHDIAFVEFTTELQSNAAKEALQGFKITPTHAMKITFA 81 (83)
T ss_dssp SCCSEEEEESCCTTCCHHHHHHHHTTSTTEEEEEECTT----TCSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCEEEEC
T ss_pred CCCCEEEEECCCCCCCHHHHHhhhccCccEEEeeeecc----cceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEEEEEe
Confidence 45789999999999999999999999999999999865 3679999999999999999999998884 689999998
Q ss_pred e
Q 006398 437 T 437 (647)
Q Consensus 437 ~ 437 (647)
.
T Consensus 82 k 82 (83)
T d2b0ga1 82 K 82 (83)
T ss_dssp C
T ss_pred c
Confidence 5
No 115
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=1.8e-15 Score=116.68 Aligned_cols=74 Identities=26% Similarity=0.534 Sum_probs=68.4
Q ss_pred EEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEe
Q 006398 362 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAV 436 (647)
Q Consensus 362 ~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~ 436 (647)
+|||+|||+.+++++|.++|++||.|..|.|+.+ .++.++|||||+|.+.++|.+||+. ++..|+|+.|.|..|
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~~-~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK-KYHNVGLSKCEIKVA 75 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTTC-SSCCBTTBCCEEECC
T ss_pred CEEEcCCCCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHhh-CCCEECCEEeEEEEC
Confidence 5899999999999999999999999999999998 5899999999999999999999975 557899999998764
No 116
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=4.1e-15 Score=121.23 Aligned_cols=81 Identities=21% Similarity=0.274 Sum_probs=71.6
Q ss_pred CCeEEEecCCCCCCHHHHHHHHHhcCC-eeEEEEeeeC-CCCCcccEEEEEecccccHHHHHH-hc--CCccCCceEEEc
Q 006398 256 QRTVFAYQICLKADERDVYEFFSRAGK-VRDVRLIMDR-NSRRSKGVGYVEFYDVMSVPMAIA-LS--GQPLLGQPVMVK 330 (647)
Q Consensus 256 ~~~v~v~~Lp~~~t~~~l~~~f~~~G~-i~~v~~~~~~-~tg~~~g~afV~f~~~~~a~~al~-~~--g~~~~g~~i~v~ 330 (647)
+++|||+|||..+|+++|+++|++||+ |..|.|+.+. .+|.++|||||+|.+.++|..||. |+ +..+.|++|.|.
T Consensus 1 n~rLyV~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~ 80 (96)
T d2disa1 1 NCRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVD 80 (96)
T ss_dssp SEEEEEECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEE
T ss_pred CCEEEEcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEE
Confidence 368999999999999999999999995 8999999886 478999999999999999999996 65 456679999999
Q ss_pred cCcchh
Q 006398 331 PSEAEK 336 (647)
Q Consensus 331 ~~~~~~ 336 (647)
++.+..
T Consensus 81 ~A~p~~ 86 (96)
T d2disa1 81 WAEPEI 86 (96)
T ss_dssp ESCSSC
T ss_pred EcCCCC
Confidence 986543
No 117
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=4.7e-15 Score=122.00 Aligned_cols=80 Identities=23% Similarity=0.389 Sum_probs=73.6
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEee
Q 006398 358 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVT 437 (647)
Q Consensus 358 ~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~ 437 (647)
...++|||+|||+.+++++|+++|+.||.|..+.+..+.++.++|||||+|.+.++|.+|+..|||..|.|+++.|.++.
T Consensus 16 ~~~~~lfV~nLp~~~te~~L~~~F~~~G~i~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~~~~ 95 (101)
T d1x5oa1 16 QDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTE 95 (101)
T ss_dssp CCTTEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEEECSSSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSCCCSS
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhhcccccceeeecccccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCccCCCC
Confidence 34578999999999999999999999999999998888888899999999999999999999999999999988876543
No 118
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=2.5e-14 Score=118.48 Aligned_cols=83 Identities=23% Similarity=0.500 Sum_probs=72.0
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC--CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEE
Q 006398 357 SGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD--ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVS 434 (647)
Q Consensus 357 ~~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~--~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~ 434 (647)
..+..+|||+|||+.+++++|+++|++|| |..+.++.+ .++.++|||||+|.+.++|.+|+ .|++..|+|+.|.|.
T Consensus 12 ~~p~~~v~V~nLp~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~~~gr~l~V~ 89 (104)
T d1wi8a_ 12 KSPPYTAFLGNLPYDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNKRIRVD 89 (104)
T ss_dssp SSSCEEEEEESCCSSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH-GGGTCEETTEECEEE
T ss_pred CCCCCEEEEeCCCCcCCHHHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHH-HcCCCEECCEEEEEE
Confidence 34568999999999999999999999999 666666665 47888999999999999998777 599999999999999
Q ss_pred EeecCCC
Q 006398 435 AVTDQSG 441 (647)
Q Consensus 435 ~~~~~~~ 441 (647)
++..+..
T Consensus 90 ~a~~~~~ 96 (104)
T d1wi8a_ 90 VADQAQD 96 (104)
T ss_dssp ECCCCCC
T ss_pred ECCCCCC
Confidence 9877653
No 119
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.54 E-value=8.5e-15 Score=116.75 Aligned_cols=78 Identities=23% Similarity=0.289 Sum_probs=71.3
Q ss_pred CCcEEEEcCCCCCCCHHHHHHhhccCCcEEE-EEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEe
Q 006398 359 GARRLYVGNLHFNMTEDQLRQVFEPFGTVEL-VQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAV 436 (647)
Q Consensus 359 ~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~-v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~ 436 (647)
....|+|.|||+.+++++|+++|..||.|.. +.+..+.++.++|+|||+|.+.++|.+|+..||+..|.|+.|.|.++
T Consensus 8 ~~~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l~ 86 (86)
T d2cqpa1 8 GPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVLG 86 (86)
T ss_dssp SSEEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 3567999999999999999999999999854 56666688999999999999999999999999999999999999874
No 120
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.54 E-value=9.7e-15 Score=119.07 Aligned_cols=77 Identities=22% Similarity=0.377 Sum_probs=69.5
Q ss_pred CCcceEEeccCCCCCCCCchhhhhhHHHHHHHHhhhcCCeEEEEEeeCCCccEEEEeCChHHHHHHHHHHcCceeCC--e
Q 006398 550 VPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAG--K 627 (647)
Q Consensus 550 ~~~~~l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~~~G~afV~F~~~e~A~~A~~~lnG~~~~g--r 627 (647)
+|+++|||+|| |..++ +++|+++|+.||.|..|.+.+ .+++|||+|.+.++|..|+..|||..|.| +
T Consensus 15 ~Ps~tl~V~nL--p~~~t--------~~~l~~~f~~~G~i~~~~~~~-~~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~ 83 (97)
T d1whya_ 15 NPTTRLWVGGL--GPNTS--------LAALAREFDRFGSIRTIDHVK-GDSFAYIQYESLDAAQAACAKMRGFPLGGPDR 83 (97)
T ss_dssp CCCSCEEEECC--CSSCC--------HHHHHHHHHTTSCEEEEEECS-SSCCEEEEESSHHHHHHHHHHHTTCBCSSSSC
T ss_pred CCCCEEEEcCC--CCCCC--------HHHHHHHHHhhcccceEeeec-cccEEEeccCCHHHHHHHHHHhCCCEeCCCce
Confidence 46789999999 77777 699999999999999999966 57999999999999999999999999976 5
Q ss_pred EEEEEEeCch
Q 006398 628 MITATFMVPQ 637 (647)
Q Consensus 628 ~i~v~~~~~~ 637 (647)
+|+|+|+...
T Consensus 84 ~l~v~~ak~~ 93 (97)
T d1whya_ 84 RLRVDFAKSG 93 (97)
T ss_dssp BCEEEECCCC
T ss_pred EEEEEeCCCC
Confidence 8999998753
No 121
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=3e-15 Score=117.35 Aligned_cols=75 Identities=17% Similarity=0.259 Sum_probs=67.0
Q ss_pred ceEEeccCCCCCCCCchhhhhhHHHHHHHHhhhcCCeEEEEEeeCCCccEEEEeCChHHHHHHHHHHcCc-eeCCeEEEE
Q 006398 553 ECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGR-WFAGKMITA 631 (647)
Q Consensus 553 ~~l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~~~G~afV~F~~~e~A~~A~~~lnG~-~~~gr~i~v 631 (647)
+.|||+|| |..++ +++|.++|+.||.|..+.+.. ++|||||+|.++++|..|++.|||. .|.|++|.|
T Consensus 2 n~l~V~nL--p~~~t--------e~~L~~~F~~~G~i~~~~~~~-~rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V 70 (80)
T d2cqha1 2 NKLYIGNL--SPAVT--------ADDLRQLFGDRKLPLAGQVLL-KSGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEV 70 (80)
T ss_dssp CCEEEECC--CTTCC--------HHHHHHHHHHTTCCCSSCEEE-ETTEEEECCSCHHHHHHHHHHHTTTCEETTEECEE
T ss_pred CEEEEECC--CCCCC--------HHHHHHHHHHhCcEEEeEEec-ccceEEEEECCHHHHHHHHHHhCCCeEECCEEEEE
Confidence 36999999 87777 799999999999998877755 5799999999999999999999996 699999999
Q ss_pred EEeCchh
Q 006398 632 TFMVPQT 638 (647)
Q Consensus 632 ~~~~~~~ 638 (647)
+|+.+..
T Consensus 71 ~~a~~k~ 77 (80)
T d2cqha1 71 DYSVSKK 77 (80)
T ss_dssp EECCCCC
T ss_pred EEcCCcC
Confidence 9988753
No 122
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.53 E-value=2.4e-14 Score=118.36 Aligned_cols=81 Identities=15% Similarity=0.163 Sum_probs=71.3
Q ss_pred CCCcceEEeccCCCCCCCCchhhhhhHHHHHHHHhhhcCCeEEEEEeeCCCccEEEEeCChHHHHHHHHHHc--CceeCC
Q 006398 549 GVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALH--GRWFAG 626 (647)
Q Consensus 549 ~~~~~~l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~~~G~afV~F~~~e~A~~A~~~ln--G~~~~g 626 (647)
.+++++|||+|| |..++ +++|..+|+.||.|..|.+.+ .+|+|||+|.++++|+.|+..|+ +..++|
T Consensus 12 ~~ps~~l~v~nl--p~~~t--------e~~l~~~F~~fG~I~~~~~~~-~k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g 80 (104)
T d1wexa_ 12 VSVSPVVHVRGL--CESVV--------EADLVEALEKFGTICYVMMMP-FKRQALVEFENIDSAKECVTFAADVPVYIAG 80 (104)
T ss_dssp CCCCSEEEEESC--CSSCC--------HHHHHHHHTTTSCEEEEEEET-TTTEEEEEESSHHHHHHHHHHHHHSCCBSSS
T ss_pred CCCCCEEEEeCC--CCCCC--------HHHHHHhhhhcccceEEEEEe-cceeEEEEeCCHHHHHHHHHHHcCCCcEEee
Confidence 457889999999 77777 799999999999999999965 68999999999999999999884 567899
Q ss_pred eEEEEEEeCchhhh
Q 006398 627 KMITATFMVPQTYE 640 (647)
Q Consensus 627 r~i~v~~~~~~~~~ 640 (647)
++|+|.|+......
T Consensus 81 ~~l~v~~s~~~~~~ 94 (104)
T d1wexa_ 81 QQAFFNYSTSKRIT 94 (104)
T ss_dssp SBCEEEECSSSSCC
T ss_pred EEEEEEEcCCCccC
Confidence 99999998765443
No 123
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.53 E-value=8.6e-15 Score=116.35 Aligned_cols=76 Identities=30% Similarity=0.522 Sum_probs=71.5
Q ss_pred CcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEeecC
Q 006398 360 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQ 439 (647)
Q Consensus 360 ~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~~~ 439 (647)
.++|||+|||..+++++|.++|++||.|..|.++++ +|||||+|.+.++|..|+..|||..|.|+.|.|.||...
T Consensus 8 ~~~l~V~nLp~~~~~~~l~~~F~~~G~i~~i~~~~~-----k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~~~ 82 (86)
T d2cpja1 8 RSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD-----KGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHS 82 (86)
T ss_dssp TTEEEEESCCTTCCHHHHHHHTSTTCCCSEEEEETT-----TTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESSCC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHhCCceEeeeecc-----cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCc
Confidence 467999999999999999999999999999999876 789999999999999999999999999999999998775
Q ss_pred C
Q 006398 440 S 440 (647)
Q Consensus 440 ~ 440 (647)
.
T Consensus 83 ~ 83 (86)
T d2cpja1 83 A 83 (86)
T ss_dssp S
T ss_pred C
Confidence 4
No 124
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=1.9e-15 Score=120.61 Aligned_cols=73 Identities=14% Similarity=0.182 Sum_probs=66.8
Q ss_pred eEEeccCCCCCCCCchhhhhhHHHHHHHHhhhcCCeEEEEEeeCCCccEEEEeCChHHHHHHHHHHcCceeCCeEEEEEE
Q 006398 554 CLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATF 633 (647)
Q Consensus 554 ~l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~~~G~afV~F~~~e~A~~A~~~lnG~~~~gr~i~v~~ 633 (647)
.|||+|| |..++ +++|.++|+.||.|..|.|.. .|+|||+|.+.++|+.||..|||..|.|+.|.|.|
T Consensus 2 rvfV~nl--p~~~~--------~~~l~~~F~~~G~v~~~~i~~--~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~ 69 (87)
T d3begb1 2 RVVVSGL--PPSGS--------WQDLKDHMREAGDVCYADVYR--DGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAY 69 (87)
T ss_dssp CEEEEEC--CSSCC--------TTHHHHHHGGGSCEEEEEECT--TSEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCB
T ss_pred eEEEECC--CCcCC--------HHHHHHHHhhhcccccccccc--cceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeE
Confidence 6999999 88887 699999999999999999865 48999999999999999999999999999999999
Q ss_pred eCchh
Q 006398 634 MVPQT 638 (647)
Q Consensus 634 ~~~~~ 638 (647)
+.+..
T Consensus 70 ~~~~~ 74 (87)
T d3begb1 70 IRVKV 74 (87)
T ss_dssp CEEEE
T ss_pred EecCc
Confidence 86554
No 125
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.53 E-value=1.1e-14 Score=118.66 Aligned_cols=77 Identities=14% Similarity=0.168 Sum_probs=69.6
Q ss_pred CcceEEeccCCCCCCCCchhhhhhHHHHHHHHhhhcCCeEEEEEeeCCCccEEEEeCChHHHHHHHHHHcCceeCCeEEE
Q 006398 551 PSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMIT 630 (647)
Q Consensus 551 ~~~~l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~~~G~afV~F~~~e~A~~A~~~lnG~~~~gr~i~ 630 (647)
...+|||.|| |..++ +++|.++|+.||.|+.|.|.. +|+|||+|.+.++|+.||+.|||..|.|+.|.
T Consensus 14 ~~~~i~V~Nl--p~~~~--------~~~L~~~F~~~G~v~~~~i~~--~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~ 81 (98)
T d1wg4a_ 14 SDFRVLVSGL--PPSGS--------WQDLKDHMREAGDVCYADVQK--DGMGMVEYLRKEDMEYALRKLDDTKFRSHEGE 81 (98)
T ss_dssp CSCEEEEECC--CSSCC--------HHHHHHHHTTSSCEEEEEEET--TTEEEEEESSHHHHHHHHHHHSSEEEECTTSC
T ss_pred CCCEEEEECC--CCCCC--------HHHHHHHHHhhcccccccccc--cceEEEEECCHHHHHHHHHHhCCCEeCCeEEE
Confidence 3458999999 88887 799999999999999999854 69999999999999999999999999999999
Q ss_pred EEEeCchhh
Q 006398 631 ATFMVPQTY 639 (647)
Q Consensus 631 v~~~~~~~~ 639 (647)
|.|+.+..-
T Consensus 82 v~~~~~~~~ 90 (98)
T d1wg4a_ 82 TSYIRVYPE 90 (98)
T ss_dssp EEEEEEECC
T ss_pred EEEEecCCC
Confidence 999876543
No 126
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=2.1e-15 Score=120.67 Aligned_cols=77 Identities=22% Similarity=0.280 Sum_probs=68.6
Q ss_pred CCCCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHHhcCCccCCceEEEccCc
Q 006398 254 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSE 333 (647)
Q Consensus 254 ~~~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~~~g~~~~g~~i~v~~~~ 333 (647)
..+++|||+|||+.+|+++|+++|++||.|..|.+. +.++|||||+|.+.++|++||. ++..|.|++|.|.++.
T Consensus 3 ~~s~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~~~-----~~~~gfafV~f~~~~~a~~a~~-~~~~i~g~~l~v~~a~ 76 (88)
T d1wf0a_ 3 SGSSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIP-----KPFRAFAFVTFADDQIAQSLCG-EDLIIKGISVHISNAE 76 (88)
T ss_dssp SCCCEEEEESCCSSSCHHHHHHHSTTTSCCCEEECC-----SSCCSCCEEECSCHHHHHHTTT-CEEEETTEEEEEECCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHcCCceEEEEe-----eccCceEEEEECCHHHHHHHHh-CCCEECCEEeEEEeCC
Confidence 356899999999999999999999999999999765 4578999999999999999996 7788999999999886
Q ss_pred chh
Q 006398 334 AEK 336 (647)
Q Consensus 334 ~~~ 336 (647)
+..
T Consensus 77 ~k~ 79 (88)
T d1wf0a_ 77 PKH 79 (88)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 127
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.53 E-value=3.9e-15 Score=118.73 Aligned_cols=76 Identities=12% Similarity=0.148 Sum_probs=68.7
Q ss_pred CCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHH-hcCCccCCceEEEcc
Q 006398 256 QRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKP 331 (647)
Q Consensus 256 ~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~-~~g~~~~g~~i~v~~ 331 (647)
...|||+|||+.+++++|.++|..||.|....++....+|.++|||||+|.+.++|..||. ||+..|.|++|.|..
T Consensus 9 ~~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l 85 (86)
T d2cqpa1 9 PTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVL 85 (86)
T ss_dssp SEEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEE
T ss_pred CCEEEEECCCCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEE
Confidence 4679999999999999999999999998875555555679999999999999999999996 999999999999975
No 128
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=1.9e-14 Score=114.59 Aligned_cols=77 Identities=22% Similarity=0.363 Sum_probs=69.9
Q ss_pred CCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEeec
Q 006398 359 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTD 438 (647)
Q Consensus 359 ~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~~ 438 (647)
..++|||+|||+.+++++|+++|++||.|..+.+.. ++|||||+|.+.++|..|+..|||..|.|+.|.|.|+.+
T Consensus 7 ~~k~l~V~nLp~~~te~~l~~~F~~~g~i~~~~~~~-----~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~akP 81 (86)
T d2cpda1 7 SVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVKK-----IRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAKP 81 (86)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHHHTTSTTCEEEEEE-----CSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECCCC
T ss_pred CCCEEEEcCCCCCCCHHHHHHhhcccceeeeEEEcc-----ccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEeccC
Confidence 357899999999999999999999999988777754 488999999999999999999999999999999999876
Q ss_pred CC
Q 006398 439 QS 440 (647)
Q Consensus 439 ~~ 440 (647)
..
T Consensus 82 ~~ 83 (86)
T d2cpda1 82 VD 83 (86)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 129
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.52 E-value=5e-14 Score=116.38 Aligned_cols=81 Identities=20% Similarity=0.221 Sum_probs=72.8
Q ss_pred CCCCCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHc--CCceecCeEEEE
Q 006398 356 YSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLN--GQLEIVGRAIKV 433 (647)
Q Consensus 356 ~~~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l--~g~~~~g~~i~v 433 (647)
...++.+|||.|||+.+++++|.++|++||.|..|.+.+. +|+|||+|.+.++|..|+..| +++.+.|+.|.|
T Consensus 11 ~~~ps~~l~v~nlp~~~te~~l~~~F~~fG~I~~~~~~~~-----k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v 85 (104)
T d1wexa_ 11 KVSVSPVVHVRGLCESVVEADLVEALEKFGTICYVMMMPF-----KRQALVEFENIDSAKECVTFAADVPVYIAGQQAFF 85 (104)
T ss_dssp CCCCCSEEEEESCCSSCCHHHHHHHHTTTSCEEEEEEETT-----TTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEE
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHhhhhcccceEEEEEec-----ceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEE
Confidence 3456899999999999999999999999999999999865 789999999999999999876 567889999999
Q ss_pred EEeecCCC
Q 006398 434 SAVTDQSG 441 (647)
Q Consensus 434 ~~~~~~~~ 441 (647)
.|+..+..
T Consensus 86 ~~s~~~~~ 93 (104)
T d1wexa_ 86 NYSTSKRI 93 (104)
T ss_dssp EECSSSSC
T ss_pred EEcCCCcc
Confidence 99977654
No 130
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=1.5e-14 Score=119.15 Aligned_cols=83 Identities=20% Similarity=0.322 Sum_probs=73.9
Q ss_pred CCCCCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEE
Q 006398 356 YSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSA 435 (647)
Q Consensus 356 ~~~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~ 435 (647)
......+|||.|||+.+|+++|+++|..||.+ .|.++.+.++..+|||||+|.+.++|.+|++ |++..|+|+.|.|.+
T Consensus 11 ~~~~~~~v~v~nLp~~~te~dl~~~F~~~~~~-~v~~~~~~~g~~~G~afVeF~~~~~a~~Al~-~~~~~i~gR~I~V~~ 88 (102)
T d1weza_ 11 QSTTGHCVHMRGLPYRATENDIYNFFSPLNPM-RVHIEIGPDGRVTGEADVEFATHEDAVAAMA-KDKANMQHRYVELFL 88 (102)
T ss_dssp CCSSSCEEEEESCCTTCCHHHHHHSSCSCCCS-EEEEEESSSSCEEEEEEEECSSSHHHHHHHT-TSSCCSSSSCCEEEE
T ss_pred cCCCCCEEEEeCCCCcCCHHHHHHHHhccCcc-eeeeEEecCCcceEEEEEEECCHHHHHHHHH-cCCCEECCEEEEEEE
Confidence 44556899999999999999999999999854 6777777788899999999999999999987 799999999999999
Q ss_pred eecCC
Q 006398 436 VTDQS 440 (647)
Q Consensus 436 ~~~~~ 440 (647)
+....
T Consensus 89 s~~~~ 93 (102)
T d1weza_ 89 NSTAG 93 (102)
T ss_dssp ECCCC
T ss_pred cCCCC
Confidence 87654
No 131
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=2.2e-15 Score=124.53 Aligned_cols=83 Identities=24% Similarity=0.363 Sum_probs=76.7
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEe
Q 006398 358 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAV 436 (647)
Q Consensus 358 ~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~ 436 (647)
.++++|||+|||..+++++|+++|..||.|..+.+..+ .+|.++|||||+|.+.++|..||+.|||..|.|+.|.|.|+
T Consensus 16 ~ps~tl~V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~a 95 (102)
T d2cpxa1 16 EPNKVLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEFG 95 (102)
T ss_dssp SCCSEEEEECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEEEC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEEeC
Confidence 45789999999999999999999999999988877776 57889999999999999999999999999999999999999
Q ss_pred ecCC
Q 006398 437 TDQS 440 (647)
Q Consensus 437 ~~~~ 440 (647)
..+.
T Consensus 96 k~k~ 99 (102)
T d2cpxa1 96 KNKK 99 (102)
T ss_dssp CCCS
T ss_pred CCcc
Confidence 8764
No 132
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=4e-14 Score=117.05 Aligned_cols=84 Identities=26% Similarity=0.322 Sum_probs=73.8
Q ss_pred CCCCCcEEEEcCCCCCCCHHHHHHhhccCCcEEEE-EeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEE
Q 006398 356 YSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELV-QLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVS 434 (647)
Q Consensus 356 ~~~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v-~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~ 434 (647)
......+|||+|||+.+++++|+++|..+|.|..+ .++.+.++.++|||||+|.+.++|.+|++ +++..|.|+.|.|.
T Consensus 11 ~~~~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~i~gR~i~V~ 89 (104)
T d1wg5a_ 11 DTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKERIGHRYIEIF 89 (104)
T ss_dssp SCSCCCEEEEESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCCSSSSCCEEE
T ss_pred CCCCCcEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCEEcceEEEEE
Confidence 34456689999999999999999999999988764 55555788999999999999999999996 88999999999999
Q ss_pred EeecCC
Q 006398 435 AVTDQS 440 (647)
Q Consensus 435 ~~~~~~ 440 (647)
++....
T Consensus 90 ~~~~~~ 95 (104)
T d1wg5a_ 90 KSSRAE 95 (104)
T ss_dssp EECTTT
T ss_pred ECCHHH
Confidence 998765
No 133
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=1.6e-14 Score=120.42 Aligned_cols=79 Identities=20% Similarity=0.201 Sum_probs=69.9
Q ss_pred CcceEEeccCCCCCCCCchhhhhhHHHHHHHHhhhcCCeEEEEEeeC-CCccEEEEeCChHHHHHHHHHHcCcee--CCe
Q 006398 551 PSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD-SAGFVYLRFENTQSAFAAQRALHGRWF--AGK 627 (647)
Q Consensus 551 ~~~~l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~-~~G~afV~F~~~e~A~~A~~~lnG~~~--~gr 627 (647)
+...|||+|| |..++ +++|.++|+.||.|..|.|... ++|+|||+|.++++|+.|+..|||..| .|+
T Consensus 6 ~~~~v~V~NL--~~~vt--------e~~L~~~F~~~G~i~~~~i~~~~~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~ 75 (108)
T d2adba1 6 PVLRIIVENL--FYPVT--------LDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACC 75 (108)
T ss_dssp CEEEEESCSC--CSTTH--------HHHHHHHHTTTSCEEEEEEEEETTEEEEEEEESCHHHHHHHHHHHHSCCSSTTCC
T ss_pred CeEEEEEeCc--CCCCC--------HHHHHHHHccCCcEEEEEEEeeCCCCeEEEEECCHHHHHHHHHHHCCCEeccCCc
Confidence 5668999999 77777 7999999999999999988543 679999999999999999999999998 689
Q ss_pred EEEEEEeCchhh
Q 006398 628 MITATFMVPQTY 639 (647)
Q Consensus 628 ~i~v~~~~~~~~ 639 (647)
+|.|.|+.+...
T Consensus 76 ~l~v~~s~~~~~ 87 (108)
T d2adba1 76 TLRIDFSKLTSL 87 (108)
T ss_dssp CCEEEECSSCSC
T ss_pred EEEEEecCCccc
Confidence 999999876544
No 134
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.51 E-value=8.9e-15 Score=120.40 Aligned_cols=83 Identities=22% Similarity=0.143 Sum_probs=70.4
Q ss_pred CcceEEeccCCCCCCCCchhhhhhHHHHHHHHhhhcCCeEEEEEeeCCCccEEEEeCChHHHHHHHHHHcCceeCCeEEE
Q 006398 551 PSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMIT 630 (647)
Q Consensus 551 ~~~~l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~~~G~afV~F~~~e~A~~A~~~lnG~~~~gr~i~ 630 (647)
.++.|||.|| ...... .+++.++|..+|+.||.|+.|.+.+ ++++|||+|.++++|.+|+..|||..|+|++|+
T Consensus 4 ~~~~L~v~nl--~~~v~~---~d~~k~~l~~lF~~~G~i~~~~~~k-~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~ 77 (104)
T d1weya_ 4 GSSGLIACVA--NDDVFS---ESETRAKFESLFRTYDKDTTFQYFK-SFKRVRINFSNPLSAADARLRLHKTEFLGKEMK 77 (104)
T ss_dssp CCCEEEEECC--CGGGGS---TTTHHHHHHHHHHTTCSSCEEEEET-TTTEEEEECSSTTHHHHHHHTSTTSEETTEECE
T ss_pred CCceEEEEeC--CchhcC---cHHHHHHHHHHhcccccceEEEEec-CCCEEEEEECCHHHHHHHHHHhcccccCCCEeE
Confidence 5678999999 433221 2234578999999999999999965 789999999999999999999999999999999
Q ss_pred EEEeCchhh
Q 006398 631 ATFMVPQTY 639 (647)
Q Consensus 631 v~~~~~~~~ 639 (647)
|.|+.+...
T Consensus 78 v~~a~~~~~ 86 (104)
T d1weya_ 78 LYFAQTLHI 86 (104)
T ss_dssp EECCCCSSC
T ss_pred EeecccCCC
Confidence 999976654
No 135
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=3.6e-15 Score=119.01 Aligned_cols=72 Identities=17% Similarity=0.174 Sum_probs=65.7
Q ss_pred CeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHH-hcCCccCCceEEEccCcch
Q 006398 257 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSEAE 335 (647)
Q Consensus 257 ~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~-~~g~~~~g~~i~v~~~~~~ 335 (647)
++|||+|||+.+|+++|.++|++||.|..+.++. .|||||+|.+.++|.+||. |||..|.|+.|.|.++...
T Consensus 1 nrvfV~nlp~~~~~~~l~~~F~~~G~v~~~~i~~-------~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~~~~ 73 (87)
T d3begb1 1 NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR-------DGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 73 (87)
T ss_dssp CCEEEEECCSSCCTTHHHHHHGGGSCEEEEEECT-------TSEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBCEEE
T ss_pred CeEEEECCCCcCCHHHHHHHHhhhcccccccccc-------cceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEEecC
Confidence 3699999999999999999999999999999863 3899999999999999996 9999999999999876543
No 136
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=4.2e-14 Score=115.19 Aligned_cols=76 Identities=22% Similarity=0.490 Sum_probs=68.5
Q ss_pred CCCcEEEEcCCC-CCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEe
Q 006398 358 GGARRLYVGNLH-FNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAV 436 (647)
Q Consensus 358 ~~~~~l~v~nLp-~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~ 436 (647)
....+|||+||| ..+++++|+++|.+||.|..|.|. +|||||+|.+.++|.+||..|||..|.|+.|.|.|+
T Consensus 13 ~~~~~lfV~nL~~~~~~~~~L~~~F~~~G~i~~~~i~-------rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a 85 (98)
T d1wf2a_ 13 SMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVH-------KGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLA 85 (98)
T ss_dssp SCCCCEEEEEECTTTCCHHHHHHSSTTSSCEEEEEEE-------TEEEEEEESSHHHHHHHHHTTTTCEETTEECEEEET
T ss_pred CCCcEEEEeCCCcccCCHHHHHHHHhhcCCEEEEEEe-------CCeEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 345679999997 568899999999999999999883 689999999999999999999999999999999998
Q ss_pred ecCC
Q 006398 437 TDQS 440 (647)
Q Consensus 437 ~~~~ 440 (647)
..+.
T Consensus 86 ~~~~ 89 (98)
T d1wf2a_ 86 AEPK 89 (98)
T ss_dssp TSCC
T ss_pred CCCC
Confidence 7643
No 137
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.51 E-value=2.2e-14 Score=116.78 Aligned_cols=80 Identities=35% Similarity=0.564 Sum_probs=72.0
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEee
Q 006398 358 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVT 437 (647)
Q Consensus 358 ~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~ 437 (647)
...++|||+|||+.+++++|+++|.+||.|..+.. ++.++|||||+|.+.++|..|+..|||..|+|+.|.|.|+.
T Consensus 14 ~~~~~l~V~nL~~~~te~~l~~~F~~~g~v~~~~~----~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~~a~ 89 (96)
T d1fjca_ 14 RAARTLLAKNLSFNITEDELKEVFEDALEIRLVSQ----DGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTG 89 (96)
T ss_dssp TGGGEEEEESCCSSCCHHHHHHHHCSEEEECCEEE----TTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEEECS
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcccceeeee----cCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 44689999999999999999999999998866543 46679999999999999999999999999999999999998
Q ss_pred cCCC
Q 006398 438 DQSG 441 (647)
Q Consensus 438 ~~~~ 441 (647)
++..
T Consensus 90 ~k~~ 93 (96)
T d1fjca_ 90 EKGG 93 (96)
T ss_dssp SSCC
T ss_pred CCCC
Confidence 7653
No 138
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.50 E-value=2.4e-14 Score=114.49 Aligned_cols=76 Identities=21% Similarity=0.336 Sum_probs=68.1
Q ss_pred CCcEEEEcCCCCCCCHHHH---HHhhccCCcEEEEEeccCC-CCC---cceEEEEEeCCHHHHHHHHHHcCCceecCeEE
Q 006398 359 GARRLYVGNLHFNMTEDQL---RQVFEPFGTVELVQLPLDE-TGH---CKGFGFVQFARLEDARNALNLNGQLEIVGRAI 431 (647)
Q Consensus 359 ~~~~l~v~nLp~~~~e~~l---~~~f~~~G~v~~v~i~~~~-~g~---~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i 431 (647)
..+.|||+|||+.+++++| .++|.+||.|..|.|+.++ ++. ..|||||+|.+.++|..|++.|||..|+|+.|
T Consensus 7 q~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~l 86 (89)
T d2cpia1 7 QKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTL 86 (89)
T ss_dssp CSSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEEE
T ss_pred ecCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEEE
Confidence 3577999999999999999 6789999999999998873 333 35999999999999999999999999999999
Q ss_pred EEE
Q 006398 432 KVS 434 (647)
Q Consensus 432 ~v~ 434 (647)
+|+
T Consensus 87 kvS 89 (89)
T d2cpia1 87 KAS 89 (89)
T ss_dssp EEE
T ss_pred EEC
Confidence 985
No 139
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=1.3e-14 Score=116.83 Aligned_cols=80 Identities=21% Similarity=0.419 Sum_probs=71.5
Q ss_pred CCcEEEEcCCCCCCCHHHHHH----hhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEE
Q 006398 359 GARRLYVGNLHFNMTEDQLRQ----VFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVS 434 (647)
Q Consensus 359 ~~~~l~v~nLp~~~~e~~l~~----~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~ 434 (647)
|+++|||+|||+.+++++|++ +|++||.|..|.+.. ++.++|||||+|.+.++|.+|++.|||..|.|+.|.|.
T Consensus 2 P~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~--~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v~ 79 (91)
T d1nu4a_ 2 PNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSR--SLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQ 79 (91)
T ss_dssp CCSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCH--HHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhcccccccceEEee--eccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEE
Confidence 468999999999999988864 589999999998865 35568999999999999999999999999999999999
Q ss_pred EeecCC
Q 006398 435 AVTDQS 440 (647)
Q Consensus 435 ~~~~~~ 440 (647)
|+..+.
T Consensus 80 ~ak~~~ 85 (91)
T d1nu4a_ 80 YAKTDS 85 (91)
T ss_dssp ECSSCC
T ss_pred EeCCCc
Confidence 997764
No 140
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=6.3e-15 Score=115.45 Aligned_cols=75 Identities=28% Similarity=0.387 Sum_probs=67.4
Q ss_pred cEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCc-eecCeEEEEEEeecC
Q 006398 361 RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQL-EIVGRAIKVSAVTDQ 439 (647)
Q Consensus 361 ~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~-~~~g~~i~v~~~~~~ 439 (647)
.+|||+|||+.+++++|+++|.+||.|..+.+.. .+|||||+|.+.++|..|++.|||. .|+|+.|.|.|+.++
T Consensus 2 n~l~V~nLp~~~te~~L~~~F~~~G~i~~~~~~~-----~rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~k 76 (80)
T d2cqha1 2 NKLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLL-----KSGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVSK 76 (80)
T ss_dssp CCEEEECCCTTCCHHHHHHHHHHTTCCCSSCEEE-----ETTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCcEEEeEEec-----ccceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCCc
Confidence 4699999999999999999999999887665554 3799999999999999999999984 799999999999875
Q ss_pred C
Q 006398 440 S 440 (647)
Q Consensus 440 ~ 440 (647)
.
T Consensus 77 ~ 77 (80)
T d2cqha1 77 K 77 (80)
T ss_dssp C
T ss_pred C
Confidence 4
No 141
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.50 E-value=2.4e-14 Score=120.31 Aligned_cols=76 Identities=17% Similarity=0.159 Sum_probs=70.9
Q ss_pred CcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEeecC
Q 006398 360 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQ 439 (647)
Q Consensus 360 ~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~~~ 439 (647)
.++|||+|||+.+++++|+++|++||.|..|.|.. .+|||||+|.+.++|.+||+.|||..|.|+.|.|.|+...
T Consensus 10 ~~~l~V~nLp~~~t~~~L~~~F~~fG~I~~v~l~~-----~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a~~~ 84 (111)
T d1whxa_ 10 KTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLPE-----GGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPIG 84 (111)
T ss_dssp EEEEEEESCCTTCCHHHHHHHHHTTSCEEEEECCS-----SSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEEETT
T ss_pred CCEEEEECCCCCCCHHHHHhhhhccCCccEEEeec-----cCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEECCCC
Confidence 47899999999999999999999999999998865 3789999999999999999999999999999999998775
Q ss_pred C
Q 006398 440 S 440 (647)
Q Consensus 440 ~ 440 (647)
.
T Consensus 85 ~ 85 (111)
T d1whxa_ 85 V 85 (111)
T ss_dssp T
T ss_pred c
Confidence 4
No 142
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.50 E-value=3.2e-14 Score=113.61 Aligned_cols=77 Identities=10% Similarity=0.132 Sum_probs=67.7
Q ss_pred CCCcceEEeccCCCCCC-CCchhhhhhHHHHHHHHhhhcCCeEEEEEeeCCCccEEEEeCChHHHHHHHHHH--cCceeC
Q 006398 549 GVPSECLLLKNMFDPKN-ETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRAL--HGRWFA 625 (647)
Q Consensus 549 ~~~~~~l~V~nl~~p~~-~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~~~G~afV~F~~~e~A~~A~~~l--nG~~~~ 625 (647)
..++++|||.|| |.. .| .+||.++|++||.|..|.+.+ .+++|||+|.+.++|..|+..| ++..|+
T Consensus 5 ~~~sr~v~v~nl--~~~~~t--------~~eL~~lF~~fG~I~~i~i~~-~k~~afV~f~~~~~A~~A~~~l~~~~~~~~ 73 (89)
T d1x4da1 5 VETRRVVHIMDF--QRGKNL--------RYQLLQLVEPFGVISNHLILN-KINEAFIEMATTEDAQAAVDYYTTTPALVF 73 (89)
T ss_dssp CCCCCEEEEESC--CCSSSH--------HHHHHTTTGGGSCEEEEEECS-SSSCEEEEESSHHHHHHHHHHHHHSCCEET
T ss_pred CCCCcEEEEECC--CCCcCC--------HHHHHHHHHhhCCeEEEEeec-cceEEEEEEcchhhHHHHHHHHhhCCCccC
Confidence 457889999999 554 33 699999999999999999965 5689999999999999999976 678899
Q ss_pred CeEEEEEEeCc
Q 006398 626 GKMITATFMVP 636 (647)
Q Consensus 626 gr~i~v~~~~~ 636 (647)
|++|+|+|+..
T Consensus 74 gr~l~V~~s~~ 84 (89)
T d1x4da1 74 GKPVRVHLSQK 84 (89)
T ss_dssp TEECEEEEECC
T ss_pred CceEEEEECCC
Confidence 99999999864
No 143
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.50 E-value=4.8e-14 Score=114.86 Aligned_cols=79 Identities=23% Similarity=0.417 Sum_probs=71.8
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecC--eEEEEE
Q 006398 357 SGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVG--RAIKVS 434 (647)
Q Consensus 357 ~~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g--~~i~v~ 434 (647)
..++++|||+|||+.+++++|+++|++||.|..|.+.++ ++||||+|.+.++|..|++.|++..|.| +.|.|.
T Consensus 14 ~~Ps~tl~V~nLp~~~t~~~l~~~f~~~G~i~~~~~~~~-----~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~ 88 (97)
T d1whya_ 14 ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKG-----DSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVD 88 (97)
T ss_dssp CCCCSCEEEECCCSSCCHHHHHHHHHTTSCEEEEEECSS-----SCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEE
T ss_pred CCCCCEEEEcCCCCCCCHHHHHHHHHhhcccceEeeecc-----ccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEE
Confidence 456799999999999999999999999999999999875 7899999999999999999999999986 589999
Q ss_pred EeecCC
Q 006398 435 AVTDQS 440 (647)
Q Consensus 435 ~~~~~~ 440 (647)
|+....
T Consensus 89 ~ak~~~ 94 (97)
T d1whya_ 89 FAKSGP 94 (97)
T ss_dssp ECCCCC
T ss_pred eCCCCC
Confidence 987543
No 144
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=6.9e-14 Score=111.79 Aligned_cols=79 Identities=20% Similarity=0.232 Sum_probs=71.6
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHH--cCCceecCeEEEEE
Q 006398 357 SGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNL--NGQLEIVGRAIKVS 434 (647)
Q Consensus 357 ~~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~--l~g~~~~g~~i~v~ 434 (647)
..++++|||+|||+.+++++|.++|++||.|..+.+... +++|||+|.+.++|..|+.. +++..+.|+.|.|.
T Consensus 5 ~~Ps~~l~V~nLp~~~t~~~L~~~f~~~G~i~~v~~~~~-----~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~v~ 79 (88)
T d2cq1a1 5 GAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKG-----KNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQ 79 (88)
T ss_dssp SSCCSEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEETT-----TTEEEEEESSHHHHHHHHHHHHHSCCEETTEECEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHhccccccccccccc-----ceEEEEEeCCHHHHHHHHHHHccCCCccCCCEEEEE
Confidence 356899999999999999999999999999999998865 68999999999999999985 46789999999999
Q ss_pred EeecCC
Q 006398 435 AVTDQS 440 (647)
Q Consensus 435 ~~~~~~ 440 (647)
|++.+.
T Consensus 80 ~sk~~~ 85 (88)
T d2cq1a1 80 YSNHKE 85 (88)
T ss_dssp ECSCSS
T ss_pred ECCCCC
Confidence 987654
No 145
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=3.5e-14 Score=113.28 Aligned_cols=76 Identities=18% Similarity=0.292 Sum_probs=66.3
Q ss_pred CCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEeec
Q 006398 359 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTD 438 (647)
Q Consensus 359 ~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~~ 438 (647)
.+++|||+|||+.+++++|+++|++||. ..+.+. ..+|||||+|.+.++|.+|+..||+..|.|+.|.|.|+..
T Consensus 4 ~s~~i~V~nLp~~~t~~~l~~lF~~~G~-~~~~~~-----~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a~~ 77 (88)
T d1wg1a_ 4 GSSGILVKNLPQDSNCQEVHDLLKDYDL-KYCYVD-----RNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPT 77 (88)
T ss_dssp CCCCEEEESCCSSCCHHHHHHHTCSSCC-CCEEEE-----GGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEECCC
T ss_pred CCCEEEEeCCCCccChHHHHHHHHhcCc-eeeeee-----ccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 3678999999999999999999999993 233332 3488999999999999999999999999999999999866
Q ss_pred CC
Q 006398 439 QS 440 (647)
Q Consensus 439 ~~ 440 (647)
+.
T Consensus 78 ~~ 79 (88)
T d1wg1a_ 78 DA 79 (88)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 146
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=2.3e-14 Score=111.96 Aligned_cols=75 Identities=25% Similarity=0.389 Sum_probs=69.0
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEee
Q 006398 358 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVT 437 (647)
Q Consensus 358 ~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~ 437 (647)
..+++|||+||+ +++++|+++|++||.|..|.+.+. +|||||+|.+.++|..|+..|||..|+|+.|.|.|+.
T Consensus 3 ~~~~ti~V~~~~--~te~~L~~~F~~~G~I~~v~~~~~-----~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~ 75 (79)
T d2bz2a1 3 RKGNTLYVYGED--MTPTLLRGAFSPFGNIIDLSMDPP-----RNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIAR 75 (79)
T ss_dssp CCCCEEEEECSS--CCHHHHHHHHSTTCCCSCEEEETT-----TTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEECC
T ss_pred CCCCEEEEECCC--CCHHHHHHHHhccCccceeeeccC-----CCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEEec
Confidence 346899999996 899999999999999999999865 7899999999999999999999999999999999997
Q ss_pred cC
Q 006398 438 DQ 439 (647)
Q Consensus 438 ~~ 439 (647)
.+
T Consensus 76 ~~ 77 (79)
T d2bz2a1 76 KQ 77 (79)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 147
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=2.6e-14 Score=114.33 Aligned_cols=78 Identities=18% Similarity=0.206 Sum_probs=69.1
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCcee-cCeEEEEEEe
Q 006398 358 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEI-VGRAIKVSAV 436 (647)
Q Consensus 358 ~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~-~g~~i~v~~~ 436 (647)
+++++|||+|||+.+++++|.++|++||.|..+.+... ..+|||||+|.+.++|..|+..|+|..| +|+.|+|.|+
T Consensus 8 pPs~tL~V~NLp~~~te~~l~~~F~~~G~v~~~~~~~~---~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~~s 84 (88)
T d2adca2 8 PPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQ---KDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFS 84 (88)
T ss_dssp CSCSEEEEECCCTTCCHHHHHHHHHTTSCCEEEEEECS---SSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEEEC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHhhccCCEEEEEEeee---cccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEEeC
Confidence 45789999999999999999999999999987766543 3468999999999999999999999988 5899999998
Q ss_pred ec
Q 006398 437 TD 438 (647)
Q Consensus 437 ~~ 438 (647)
+.
T Consensus 85 k~ 86 (88)
T d2adca2 85 KS 86 (88)
T ss_dssp SS
T ss_pred CC
Confidence 64
No 148
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.49 E-value=4.2e-14 Score=109.02 Aligned_cols=74 Identities=20% Similarity=0.262 Sum_probs=67.6
Q ss_pred cEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEe
Q 006398 361 RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAV 436 (647)
Q Consensus 361 ~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~ 436 (647)
++|||+|||+.+++++|+++|..||.|..|.|+.+..+. ++||||+|.+.++|.+||. +++..|+|+.|.|..+
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~~~~-~~~afV~F~~~~~a~~Al~-~~~~~i~g~~i~V~~~ 74 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLKKN-FRFARIEFARYDGALAAIT-KTHKVVGQNEIIVSHL 74 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGSCEEEEEEEECTTSS-SEEEEEEESSHHHHHHHHT-TTTCEETTEECEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCCceEEEEEEeecccc-ceEEEEEEcchHHhHHHHH-hcCcEECCEEEEEEEC
Confidence 479999999999999999999999999999998886543 5799999999999999996 7899999999999875
No 149
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.49 E-value=6.3e-14 Score=114.13 Aligned_cols=79 Identities=19% Similarity=0.198 Sum_probs=72.1
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEe
Q 006398 357 SGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAV 436 (647)
Q Consensus 357 ~~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~ 436 (647)
.....+|||+|||+.+++++|+++|..||.|..|.|.. +|||||+|.+.++|.+||+.|||..|.|+.|.|.++
T Consensus 12 ~~~~~~i~V~Nlp~~~~~~~L~~~F~~~G~v~~~~i~~------~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~~ 85 (98)
T d1wg4a_ 12 RRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQK------DGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYI 85 (98)
T ss_dssp CSCSCEEEEECCCSSCCHHHHHHHHTTSSCEEEEEEET------TTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEEEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHhhcccccccccc------cceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEEE
Confidence 34567899999999999999999999999999999864 589999999999999999999999999999999998
Q ss_pred ecCCC
Q 006398 437 TDQSG 441 (647)
Q Consensus 437 ~~~~~ 441 (647)
.....
T Consensus 86 ~~~~~ 90 (98)
T d1wg4a_ 86 RVYPE 90 (98)
T ss_dssp EEECC
T ss_pred ecCCC
Confidence 76543
No 150
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=1.4e-15 Score=122.43 Aligned_cols=76 Identities=18% Similarity=0.349 Sum_probs=68.2
Q ss_pred CCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEe-----eeCCCCCcccEEEEEecccccHHHHHHhcCCccCCceEEEc
Q 006398 256 QRTVFAYQICLKADERDVYEFFSRAGKVRDVRLI-----MDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVK 330 (647)
Q Consensus 256 ~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~-----~~~~tg~~~g~afV~f~~~~~a~~al~~~g~~~~g~~i~v~ 330 (647)
.++|||+|||+.+|+++|+++|++||.|..+.+. .+..++.++|||||+|.+.++|..|++|||..+.|+.|.|.
T Consensus 1 aRrlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~~l~g~~~~Gr~l~V~ 80 (90)
T d1u2fa_ 1 ARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIR 80 (90)
T ss_dssp CCEEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGGGGSSCCSSSSCCCCB
T ss_pred CCEEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHHhhCCcEECCEEEEEC
Confidence 3789999999999999999999999987766553 45567889999999999999999999999999999999996
Q ss_pred c
Q 006398 331 P 331 (647)
Q Consensus 331 ~ 331 (647)
.
T Consensus 81 r 81 (90)
T d1u2fa_ 81 R 81 (90)
T ss_dssp C
T ss_pred C
Confidence 4
No 151
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=3.9e-14 Score=118.49 Aligned_cols=77 Identities=25% Similarity=0.328 Sum_probs=70.4
Q ss_pred CcEEEEcCCCC-CCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEeec
Q 006398 360 ARRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTD 438 (647)
Q Consensus 360 ~~~l~v~nLp~-~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~~ 438 (647)
+.+|||+|||+ .+++++|+++|+.||.|..|.|+.+ .+|||||+|.+.++|.+|++.|+|..|+|+.|.|.|+..
T Consensus 2 ~~~l~V~nL~p~~~te~~L~~~F~~fG~I~~v~i~~~----~kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~~ 77 (109)
T d2adca1 2 NSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFN----KKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKH 77 (109)
T ss_dssp CSEEEEESCCTTTCCHHHHHHHHHHHTCEEEEEECCT----TSCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCSC
T ss_pred CCEEEEeCCCcccCCHHHHHHHHhhccccceEEEEec----ccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 57899999965 5999999999999999999999876 368999999999999999999999999999999999865
Q ss_pred CC
Q 006398 439 QS 440 (647)
Q Consensus 439 ~~ 440 (647)
..
T Consensus 78 ~~ 79 (109)
T d2adca1 78 QN 79 (109)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 152
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=3.1e-14 Score=115.94 Aligned_cols=81 Identities=17% Similarity=0.218 Sum_probs=72.4
Q ss_pred cEEEEcCCCCCCCHHHHHHhhccCCc-EEEEEeccCC--CCCcceEEEEEeCCHHHHHHHHHHcC--CceecCeEEEEEE
Q 006398 361 RRLYVGNLHFNMTEDQLRQVFEPFGT-VELVQLPLDE--TGHCKGFGFVQFARLEDARNALNLNG--QLEIVGRAIKVSA 435 (647)
Q Consensus 361 ~~l~v~nLp~~~~e~~l~~~f~~~G~-v~~v~i~~~~--~g~~~g~afVef~~~~~A~~Al~~l~--g~~~~g~~i~v~~ 435 (647)
++|||+|||..+++++|+++|+.||. |..|.|+.+. ++.++|||||+|.+.++|..|+..|+ ++.++|+.|.|.|
T Consensus 2 ~rLyV~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~~ 81 (96)
T d2disa1 2 CRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDW 81 (96)
T ss_dssp EEEEEECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEEE
T ss_pred CEEEEcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEEE
Confidence 57999999999999999999999995 8999998873 67889999999999999999999885 4667899999999
Q ss_pred eecCCC
Q 006398 436 VTDQSG 441 (647)
Q Consensus 436 ~~~~~~ 441 (647)
|.++..
T Consensus 82 A~p~~~ 87 (96)
T d2disa1 82 AEPEID 87 (96)
T ss_dssp SCSSCS
T ss_pred cCCCCC
Confidence 977554
No 153
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.48 E-value=3.1e-14 Score=116.25 Aligned_cols=78 Identities=17% Similarity=0.334 Sum_probs=68.0
Q ss_pred CCCcceEEeccCCCCCC-CCchhhhhhHHHHHHHHhhhcCCeEEEEEeeCCCccEEEEeCChHHHHHHHH--HHcCceeC
Q 006398 549 GVPSECLLLKNMFDPKN-ETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQR--ALHGRWFA 625 (647)
Q Consensus 549 ~~~~~~l~V~nl~~p~~-~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~~~G~afV~F~~~e~A~~A~~--~lnG~~~~ 625 (647)
..++++|||+|| |.. ++ +++|..+|+.||.|..|.+++ ++|+|||+|.+.++|..|+. .+++..|+
T Consensus 15 ~~~~~~l~v~nL--p~~~~t--------e~~l~~~F~~fG~V~~v~~~~-~k~~afV~f~~~~~A~~Ai~~~~~~~~~~~ 83 (99)
T d1x4fa1 15 QELGRVIHLSNL--PHSGYS--------DSAVLKLAEPYGKIKNYILMR-MKSQAFIEMETREDAMAMVDHCLKKALWFQ 83 (99)
T ss_dssp SCCCCEEEEESC--CCSSCC--------SHHHHTTTTTTSCCSEEEEET-TTTEEEEECSSHHHHHHHHHHHHHSCCCSS
T ss_pred CCCCCEEEEeCC--cCCccC--------HHHHHhhhccccceeEEEEee-cCCcEEEEecchHHHHHHHHHHhcCCceEC
Confidence 346789999999 653 45 589999999999999999965 57999999999999999998 57888999
Q ss_pred CeEEEEEEeCch
Q 006398 626 GKMITATFMVPQ 637 (647)
Q Consensus 626 gr~i~v~~~~~~ 637 (647)
|++|.|+|+...
T Consensus 84 gr~l~V~~s~~~ 95 (99)
T d1x4fa1 84 GRCVKVDLSEKY 95 (99)
T ss_dssp SSCCEEEEECSC
T ss_pred CEEEEEEEcCCc
Confidence 999999998643
No 154
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=1.1e-14 Score=111.80 Aligned_cols=70 Identities=29% Similarity=0.533 Sum_probs=65.7
Q ss_pred EEEcCCCCCCCHHHHHHhhccCCcEEEEEeccC-CCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEE
Q 006398 363 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIK 432 (647)
Q Consensus 363 l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~-~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~ 432 (647)
|||+|||+.+++++|.++|.+||.|..+.++.+ .++.++|+|||+|.+.++|.+|++.|||..|.|+.|+
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred CEEeCCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 799999999999999999999999999988888 5888999999999999999999999999999998653
No 155
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=4.2e-14 Score=116.81 Aligned_cols=79 Identities=27% Similarity=0.301 Sum_probs=71.5
Q ss_pred CCcEEEEcCCCCCCCHHHHHHhhccCCcEEE-EEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEee
Q 006398 359 GARRLYVGNLHFNMTEDQLRQVFEPFGTVEL-VQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVT 437 (647)
Q Consensus 359 ~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~-v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~ 437 (647)
...+|||+|||+.+++++|.++|..||.|.. +.++.+.+|.++|||||+|.+.++|.+||+ |++..|+|+.|.|.++.
T Consensus 7 ~~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~i~gr~i~V~~~~ 85 (103)
T d2cpya1 7 AKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRKKLNGREAFVHVVT 85 (103)
T ss_dssp CCCEEEEESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSEEETTEEEEEEEEC
T ss_pred CceEEEEeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCCeECCcEEEEEECC
Confidence 3578999999999999999999999998865 566666789999999999999999999996 89999999999999875
Q ss_pred c
Q 006398 438 D 438 (647)
Q Consensus 438 ~ 438 (647)
.
T Consensus 86 ~ 86 (103)
T d2cpya1 86 L 86 (103)
T ss_dssp H
T ss_pred H
Confidence 4
No 156
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.46 E-value=1.2e-13 Score=106.49 Aligned_cols=72 Identities=18% Similarity=0.278 Sum_probs=64.4
Q ss_pred EEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEeecCC
Q 006398 363 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQS 440 (647)
Q Consensus 363 l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~~~~ 440 (647)
|||+|||+.+++++|+++|.+|| +..+.+.. .+|||||+|.+.++|.+|+..|||..|.|+.|.|.|+....
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g-~~~~~~~~-----~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~d~ 72 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE-LKYCFVDK-----YKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTDA 72 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC-EEEEEEET-----TTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCSTT
T ss_pred CEEeCCCCcCCHHHHHHHHhccc-ccceeecc-----cceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCCCC
Confidence 79999999999999999999999 45555543 48999999999999999999999999999999999986543
No 157
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=5.5e-14 Score=117.07 Aligned_cols=81 Identities=23% Similarity=0.203 Sum_probs=71.7
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCcee--cCeEEEEEE
Q 006398 358 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEI--VGRAIKVSA 435 (647)
Q Consensus 358 ~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~--~g~~i~v~~ 435 (647)
.+..+|||+|||+.+|+++|+++|++||.|..|.|... ..+|+|||+|.+.++|..|+..|+|..| .|..|.|.|
T Consensus 5 s~~~~v~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~---~~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v~~ 81 (108)
T d2adba1 5 SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTK---NNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDF 81 (108)
T ss_dssp CCEEEEESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEE---TTEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEEEE
T ss_pred CCeEEEEEeCcCCCCCHHHHHHHHccCCcEEEEEEEee---CCCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEEEe
Confidence 45678999999999999999999999999999988765 2479999999999999999999999988 478899999
Q ss_pred eecCCC
Q 006398 436 VTDQSG 441 (647)
Q Consensus 436 ~~~~~~ 441 (647)
+.....
T Consensus 82 s~~~~~ 87 (108)
T d2adba1 82 SKLTSL 87 (108)
T ss_dssp CSSCSC
T ss_pred cCCccc
Confidence 876554
No 158
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.43 E-value=1.9e-13 Score=111.54 Aligned_cols=79 Identities=23% Similarity=0.326 Sum_probs=71.1
Q ss_pred CCCCcEEEEcCCCCC-CCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHH--HcCCceecCeEEEE
Q 006398 357 SGGARRLYVGNLHFN-MTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN--LNGQLEIVGRAIKV 433 (647)
Q Consensus 357 ~~~~~~l~v~nLp~~-~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~--~l~g~~~~g~~i~v 433 (647)
...+++|||+|||.. +++++|.++|++||.|..|.+..+ +|+|||+|.+.++|..|++ .++++.|.|+.|.|
T Consensus 15 ~~~~~~l~v~nLp~~~~te~~l~~~F~~fG~V~~v~~~~~-----k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l~V 89 (99)
T d1x4fa1 15 QELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM-----KSQAFIEMETREDAMAMVDHCLKKALWFQGRCVKV 89 (99)
T ss_dssp SCCCCEEEEESCCCSSCCSHHHHTTTTTTSCCSEEEEETT-----TTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCCEE
T ss_pred CCCCCEEEEeCCcCCccCHHHHHhhhccccceeEEEEeec-----CCcEEEEecchHHHHHHHHHHhcCCceECCEEEEE
Confidence 355789999999975 899999999999999999999875 7899999999999999997 57889999999999
Q ss_pred EEeecCC
Q 006398 434 SAVTDQS 440 (647)
Q Consensus 434 ~~~~~~~ 440 (647)
.|+..+.
T Consensus 90 ~~s~~~~ 96 (99)
T d1x4fa1 90 DLSEKYK 96 (99)
T ss_dssp EEECSCS
T ss_pred EEcCCcc
Confidence 9997654
No 159
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.41 E-value=3.6e-13 Score=107.42 Aligned_cols=78 Identities=21% Similarity=0.275 Sum_probs=70.1
Q ss_pred CCCcEEEEcCCCCC-CCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHc--CCceecCeEEEEE
Q 006398 358 GGARRLYVGNLHFN-MTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLN--GQLEIVGRAIKVS 434 (647)
Q Consensus 358 ~~~~~l~v~nLp~~-~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l--~g~~~~g~~i~v~ 434 (647)
.++++|||+|||.. +|+++|.++|++||.|..|.++.+ +++|||+|.+.++|..|+..| ++..+.|++|.|.
T Consensus 6 ~~sr~v~v~nl~~~~~t~~eL~~lF~~fG~I~~i~i~~~-----k~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l~V~ 80 (89)
T d1x4da1 6 ETRRVVHIMDFQRGKNLRYQLLQLVEPFGVISNHLILNK-----INEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVH 80 (89)
T ss_dssp CCCCEEEEESCCCSSSHHHHHHTTTGGGSCEEEEEECSS-----SSCEEEEESSHHHHHHHHHHHHHSCCEETTEECEEE
T ss_pred CCCcEEEEECCCCCcCCHHHHHHHHHhhCCeEEEEeecc-----ceEEEEEEcchhhHHHHHHHHhhCCCccCCceEEEE
Confidence 55799999999986 789999999999999999999876 678999999999999999855 7889999999999
Q ss_pred EeecCC
Q 006398 435 AVTDQS 440 (647)
Q Consensus 435 ~~~~~~ 440 (647)
|+....
T Consensus 81 ~s~~~~ 86 (89)
T d1x4da1 81 LSQKYK 86 (89)
T ss_dssp EECCCT
T ss_pred ECCCcc
Confidence 987543
No 160
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=8e-14 Score=116.75 Aligned_cols=81 Identities=23% Similarity=0.382 Sum_probs=71.4
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHhhccCCcEEE-EEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEe
Q 006398 358 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVEL-VQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAV 436 (647)
Q Consensus 358 ~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~-v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~ 436 (647)
....+|||+|||+.+++++|.++|+.||.|.. +.+..+.+|.++|||||+|.+.++|.+|++ |||..|+|+.|.|..+
T Consensus 16 ~~~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~i~gR~i~V~~~ 94 (112)
T d1wela1 16 EAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQYMGNRFIQVHPI 94 (112)
T ss_dssp CCCCEEEEECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBCSTTSCBEEEEE
T ss_pred CCCeEEEEecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCcCCCEEEEEEEc
Confidence 45679999999999999999999999998865 444555789999999999999999999996 8999999999999987
Q ss_pred ecC
Q 006398 437 TDQ 439 (647)
Q Consensus 437 ~~~ 439 (647)
...
T Consensus 95 ~~~ 97 (112)
T d1wela1 95 TKK 97 (112)
T ss_dssp CHH
T ss_pred ChH
Confidence 653
No 161
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=2.7e-13 Score=111.32 Aligned_cols=60 Identities=28% Similarity=0.464 Sum_probs=55.1
Q ss_pred HHHHHHHhhhcCCeEEEEEeeC----CCccEEEEeCChHHHHHHHHHHcCceeCCeEEEEEEeC
Q 006398 576 KEDVEGECSKFGKLKHIFVEKD----SAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMV 635 (647)
Q Consensus 576 ~~dl~~~F~~fG~V~~v~i~~~----~~G~afV~F~~~e~A~~A~~~lnG~~~~gr~i~v~~~~ 635 (647)
+++|.++|++||.|..|.|+++ ++|+|||+|.+.++|.+|+..|||+.|+|++|.|+|.|
T Consensus 41 ed~l~e~f~k~G~I~~v~I~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~sP 104 (104)
T d1jmta_ 41 EEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSP 104 (104)
T ss_dssp HHHHHHHHHHTCCEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEECC
T ss_pred HHHHHHHhccCCCEEEEEeecCCCCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEECC
Confidence 4678899999999999999654 57999999999999999999999999999999999965
No 162
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.37 E-value=5.7e-13 Score=108.80 Aligned_cols=77 Identities=14% Similarity=0.309 Sum_probs=64.2
Q ss_pred CCCcceEEecc--CCCCCCCCchhhhhhHHHHHHHHhhhcCCeEEEEEeeCCCccEEEEeCChHHHHHHHHHHcCceeC-
Q 006398 549 GVPSECLLLKN--MFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFA- 625 (647)
Q Consensus 549 ~~~~~~l~V~n--l~~p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~~~G~afV~F~~~e~A~~A~~~lnG~~~~- 625 (647)
..|+++|+|.| | |..++ +++|..+|++||.|..|.+++ .+|+|||+|.+.++|..|+..|||..+.
T Consensus 15 ~~pt~~l~V~ng~L--~~~vt--------e~~L~~~F~~~G~i~~i~~~~-~k~~aFV~f~~~e~A~~A~~~lng~~i~~ 83 (101)
T d2cq2a1 15 SYATQSLVVANGGL--GNGVS--------RNQLLPVLEKCGLVDALLMPP-NKPYSFARYRTTEESKRAYVTLNGKEVVD 83 (101)
T ss_dssp SSCCSEEEEETCTG--GGTCC--------HHHHHHHHHHHSCEEEEECCT-TCSCEEEEESSHHHHHHHHHHTTTCEEEC
T ss_pred CCCCceEEEECCCC--CCCCC--------HHHHHHHHHhhCcccEEeecc-CccEEEEEECCHHHHHHHHHHhCCCCCCC
Confidence 45778899966 9 77777 799999999999999998865 6799999999999999999999999882
Q ss_pred --Ce--EEEEEEeCc
Q 006398 626 --GK--MITATFMVP 636 (647)
Q Consensus 626 --gr--~i~v~~~~~ 636 (647)
+. ++.+.|+..
T Consensus 84 ~~~~~i~~~~~~~~~ 98 (101)
T d2cq2a1 84 DLGQKITLYLNFVEK 98 (101)
T ss_dssp TTSCEEECEEEEESC
T ss_pred CCCcEEEEEEEeeee
Confidence 23 455566654
No 163
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.35 E-value=8.3e-13 Score=108.39 Aligned_cols=79 Identities=13% Similarity=0.086 Sum_probs=69.8
Q ss_pred CCCcEEEEcCCCCCC-C----HHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEE
Q 006398 358 GGARRLYVGNLHFNM-T----EDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIK 432 (647)
Q Consensus 358 ~~~~~l~v~nLp~~~-~----e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~ 432 (647)
.....|||+||+..+ + .++|.++|++||.|..+.+.+. +++|||+|.+.++|.+|+..|||..|+|+.|.
T Consensus 3 ~~~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~~~~k~-----~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~ 77 (104)
T d1weya_ 3 SGSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQYFKS-----FKRVRINFSNPLSAADARLRLHKTEFLGKEMK 77 (104)
T ss_dssp SCCCEEEEECCCGGGGSTTTHHHHHHHHHHTTCSSCEEEEETT-----TTEEEEECSSTTHHHHHHHTSTTSEETTEECE
T ss_pred CCCceEEEEeCCchhcCcHHHHHHHHHHhcccccceEEEEecC-----CCEEEEEECCHHHHHHHHHHhcccccCCCEeE
Confidence 346889999999876 3 3679999999999999999864 78999999999999999999999999999999
Q ss_pred EEEeecCCC
Q 006398 433 VSAVTDQSG 441 (647)
Q Consensus 433 v~~~~~~~~ 441 (647)
|.|+.....
T Consensus 78 v~~a~~~~~ 86 (104)
T d1weya_ 78 LYFAQTLHI 86 (104)
T ss_dssp EECCCCSSC
T ss_pred EeecccCCC
Confidence 999976543
No 164
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.31 E-value=1.8e-13 Score=112.38 Aligned_cols=76 Identities=21% Similarity=0.195 Sum_probs=71.4
Q ss_pred cEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEe
Q 006398 361 RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAV 436 (647)
Q Consensus 361 ~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~ 436 (647)
..++|.+++..+++++|.++|++||.|..|.|+.+.++.++|+|||+|.+.++|.+|+..|||..|+|+.|.|.|.
T Consensus 28 ~~~~v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~s 103 (104)
T d1jmta_ 28 SDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEEC
T ss_pred chHHhhhhhhhhhHHHHHHHhccCCCEEEEEeecCCCCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEEC
Confidence 4577888888899999999999999999999998889999999999999999999999999999999999999985
No 165
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.25 E-value=4.5e-12 Score=98.41 Aligned_cols=73 Identities=11% Similarity=0.091 Sum_probs=62.9
Q ss_pred CCeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHHhcCCccCCce-EEEccCcc
Q 006398 256 QRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQP-VMVKPSEA 334 (647)
Q Consensus 256 ~~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~~~g~~~~g~~-i~v~~~~~ 334 (647)
...|+|+|||+.++++.| .+|++||.|.++.+. ..+|||||+|.+.++|.+||++||..|.|+. |.|.++..
T Consensus 4 ~~wV~V~G~p~~~~~~il-~~F~~~G~I~~~~~~------~~~~~~fV~f~~~~~A~~Al~~nG~~~~g~~~vgV~~~~~ 76 (81)
T d1wwha1 4 DTWVTVFGFPQASASYIL-LQFAQYGNILKHVMS------NTGNWMHIRYQSKLQARKALSKDGRIFGESIMIGVKPCID 76 (81)
T ss_dssp GGEEEEECCCGGGHHHHH-HHHHTTSCEEEEEEC------SSSSEEEEEESSHHHHHHHHTTTTCEETTTEECEEEECCC
T ss_pred ccEEEEECCChHHHHHHH-HHHHhhhhhheEEec------CCCCEEEEEEcccHHHHHHHhcCCCeECCcEEEEEEeCCC
Confidence 368999999999986555 589999999999874 5678999999999999999999999999985 56888754
Q ss_pred h
Q 006398 335 E 335 (647)
Q Consensus 335 ~ 335 (647)
+
T Consensus 77 k 77 (81)
T d1wwha1 77 K 77 (81)
T ss_dssp H
T ss_pred h
Confidence 4
No 166
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.24 E-value=5.8e-14 Score=112.81 Aligned_cols=78 Identities=24% Similarity=0.452 Sum_probs=67.1
Q ss_pred cEEEEcCCCCCCCHHHHHHhhccCCcEEEEEecc------CCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEE
Q 006398 361 RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPL------DETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVS 434 (647)
Q Consensus 361 ~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~------~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~ 434 (647)
++|||+|||+.+++++|.++|+.||.|..+.+.. ..++.++|||||+|.+.++|..|++ |||..|.|+.|.|.
T Consensus 2 RrlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~~-l~g~~~~Gr~l~V~ 80 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMA-FDGIIFQGQSLKIR 80 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGGG-GSSCCSSSSCCCCB
T ss_pred CEEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHHh-hCCcEECCEEEEEC
Confidence 6899999999999999999999999876655432 1356679999999999999999985 99999999999998
Q ss_pred EeecC
Q 006398 435 AVTDQ 439 (647)
Q Consensus 435 ~~~~~ 439 (647)
.+++.
T Consensus 81 r~k~~ 85 (90)
T d1u2fa_ 81 RPHDY 85 (90)
T ss_dssp CTTCC
T ss_pred CCCCC
Confidence 65554
No 167
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20 E-value=1.8e-11 Score=99.71 Aligned_cols=64 Identities=25% Similarity=0.398 Sum_probs=58.6
Q ss_pred CCCcEEEEcC--CCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCcee
Q 006398 358 GGARRLYVGN--LHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEI 426 (647)
Q Consensus 358 ~~~~~l~v~n--Lp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~ 426 (647)
.++.+|+|.| ||..+++++|+++|++||.|..|.+..+ ++||||+|.+.++|..|+..|||..+
T Consensus 16 ~pt~~l~V~ng~L~~~vte~~L~~~F~~~G~i~~i~~~~~-----k~~aFV~f~~~e~A~~A~~~lng~~i 81 (101)
T d2cq2a1 16 YATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPN-----KPYSFARYRTTEESKRAYVTLNGKEV 81 (101)
T ss_dssp SCCSEEEEETCTGGGTCCHHHHHHHHHHHSCEEEEECCTT-----CSCEEEEESSHHHHHHHHHHTTTCEE
T ss_pred CCCceEEEECCCCCCCCCHHHHHHHHHhhCcccEEeeccC-----ccEEEEEECCHHHHHHHHHHhCCCCC
Confidence 4567888855 9999999999999999999999998875 78999999999999999999999877
No 168
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20 E-value=1e-11 Score=103.74 Aligned_cols=70 Identities=14% Similarity=0.141 Sum_probs=60.6
Q ss_pred eEEeccCCCCCCCCchhhhhhHHHHHHHHhhhcCCeEEEEEeeCCCccEEEEeCCh-HHHHHHHHHHcCceeCCeEEEEE
Q 006398 554 CLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENT-QSAFAAQRALHGRWFAGKMITAT 632 (647)
Q Consensus 554 ~l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~~~G~afV~F~~~-e~A~~A~~~lnG~~~~gr~i~v~ 632 (647)
.+||+|| |..+| +++|.++|+.||.|..|.|++ ++|||||+|.+. ++|..|+..|||..+.++.+.|.
T Consensus 13 ~~fvgnL--~~~~t--------ee~Lk~~F~~fG~V~~v~i~~-~kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~ 81 (113)
T d1owxa_ 13 LKFSGDL--DDQTC--------REDLHILFSNHGEIKWIDFVR-GAKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVT 81 (113)
T ss_dssp EEEEESC--CSSCC--------HHHHHHHTCSSCCEEEEECCT-TCSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEE
T ss_pred EEEECCC--CCCCC--------HHHHHHHHHhcCChheEEEec-CCceEEEEecCcHHHHHHHHHHhcCCceecCceEEE
Confidence 4599999 77777 799999999999999999976 589999999996 78999999999998876666665
Q ss_pred Ee
Q 006398 633 FM 634 (647)
Q Consensus 633 ~~ 634 (647)
+.
T Consensus 82 ~~ 83 (113)
T d1owxa_ 82 WE 83 (113)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 169
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.18 E-value=2.7e-11 Score=93.88 Aligned_cols=74 Identities=12% Similarity=0.271 Sum_probs=62.0
Q ss_pred cceEEeccCCCCCCCCchhhhhhHHHHHHHHhhhcCCeEEEEEeeCCCccEEEEeCChHHHHHHHHHHcCceeCCeE-EE
Q 006398 552 SECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKM-IT 630 (647)
Q Consensus 552 ~~~l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~~~G~afV~F~~~e~A~~A~~~lnG~~~~gr~-i~ 630 (647)
.+-|+|.++ |.+.+ ++|..+|+.||.|..+.+.. .+|||||+|.+.++|++|++ |||..|+|+. |.
T Consensus 4 ~~wV~V~G~--p~~~~---------~~il~~F~~~G~I~~~~~~~-~~~~~fV~f~~~~~A~~Al~-~nG~~~~g~~~vg 70 (81)
T d1wwha1 4 DTWVTVFGF--PQASA---------SYILLQFAQYGNILKHVMSN-TGNWMHIRYQSKLQARKALS-KDGRIFGESIMIG 70 (81)
T ss_dssp GGEEEEECC--CGGGH---------HHHHHHHHTTSCEEEEEECS-SSSEEEEEESSHHHHHHHHT-TTTCEETTTEECE
T ss_pred ccEEEEECC--ChHHH---------HHHHHHHHhhhhhheEEecC-CCCEEEEEEcccHHHHHHHh-cCCCeECCcEEEE
Confidence 457999999 65544 56777899999999999854 67999999999999999996 9999999985 67
Q ss_pred EEEeCchh
Q 006398 631 ATFMVPQT 638 (647)
Q Consensus 631 v~~~~~~~ 638 (647)
|..+....
T Consensus 71 V~~~~~k~ 78 (81)
T d1wwha1 71 VKPCIDKN 78 (81)
T ss_dssp EEECCCHH
T ss_pred EEeCCChh
Confidence 88876554
No 170
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.17 E-value=4.8e-11 Score=96.80 Aligned_cols=80 Identities=21% Similarity=0.260 Sum_probs=68.7
Q ss_pred CCCcEEEEcCC--CCCC---------CHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCcee
Q 006398 358 GGARRLYVGNL--HFNM---------TEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEI 426 (647)
Q Consensus 358 ~~~~~l~v~nL--p~~~---------~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~ 426 (647)
...++|+|.|| |..+ ..++|.+.|++||.|..|.++.+ ..+|+|||+|.+.++|.+|+..|||..|
T Consensus 6 ~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~---~~~G~~fV~f~~~e~A~~A~~~lng~~~ 82 (99)
T d2dita1 6 RHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWF 82 (99)
T ss_dssp CSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETT---CTTCEEEEECSCHHHHHHHHHHSTTCEE
T ss_pred CCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCC---CCccEEEEEECCHHHHHHHHHHhCCcEE
Confidence 55789999999 4432 23689999999999999988765 3478999999999999999999999999
Q ss_pred cCeEEEEEEeecCC
Q 006398 427 VGRAIKVSAVTDQS 440 (647)
Q Consensus 427 ~g~~i~v~~~~~~~ 440 (647)
+|+.|.|.|...+.
T Consensus 83 ~gr~i~v~~~~g~~ 96 (99)
T d2dita1 83 GGRQITAQAWDGTT 96 (99)
T ss_dssp TTEECEEEECCSCC
T ss_pred CCEEEEEEEeCCcC
Confidence 99999999987654
No 171
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.16 E-value=5.1e-11 Score=99.36 Aligned_cols=77 Identities=14% Similarity=0.169 Sum_probs=67.1
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCH-HHHHHHHHHcCCceecCeEEEEEEe
Q 006398 358 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARL-EDARNALNLNGQLEIVGRAIKVSAV 436 (647)
Q Consensus 358 ~~~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~-~~A~~Al~~l~g~~~~g~~i~v~~~ 436 (647)
.....+||+|||+.+|+++|+++|++||.|..|.|+.+ +|||||.|.+. ++|..|+..|++..+.++.+.|.+.
T Consensus 9 ~g~~~~fvgnL~~~~tee~Lk~~F~~fG~V~~v~i~~~-----kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~~ 83 (113)
T d1owxa_ 9 IGCLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRG-----AKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTWE 83 (113)
T ss_dssp CCCEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTT-----CSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEEE
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHhcCChheEEEecC-----CceEEEEecCcHHHHHHHHHHhcCCceecCceEEEEe
Confidence 33566799999999999999999999999999999875 89999999985 7899999999998888877777776
Q ss_pred ecC
Q 006398 437 TDQ 439 (647)
Q Consensus 437 ~~~ 439 (647)
...
T Consensus 84 ~~~ 86 (113)
T d1owxa_ 84 VLE 86 (113)
T ss_dssp ECC
T ss_pred ecc
Confidence 543
No 172
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.15 E-value=2e-11 Score=100.16 Aligned_cols=81 Identities=16% Similarity=0.193 Sum_probs=69.1
Q ss_pred CCCcEEEEcCC--CCCC--------CHHHHHHhhccCCcEEEEEeccCC---CCCcceEEEEEeCCHHHHHHHHHHcCCc
Q 006398 358 GGARRLYVGNL--HFNM--------TEDQLRQVFEPFGTVELVQLPLDE---TGHCKGFGFVQFARLEDARNALNLNGQL 424 (647)
Q Consensus 358 ~~~~~l~v~nL--p~~~--------~e~~l~~~f~~~G~v~~v~i~~~~---~g~~~g~afVef~~~~~A~~Al~~l~g~ 424 (647)
+++++|+|.|| |..+ ..++|++.|++||.|..|.|+++. .....|++||+|.+.++|.+|+..|+|.
T Consensus 2 ~Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr 81 (104)
T d1o0pa_ 2 HPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGR 81 (104)
T ss_dssp CCCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSC
T ss_pred CCCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCC
Confidence 45889999999 4443 236799999999999999998863 2334689999999999999999999999
Q ss_pred eecCeEEEEEEeec
Q 006398 425 EIVGRAIKVSAVTD 438 (647)
Q Consensus 425 ~~~g~~i~v~~~~~ 438 (647)
.|+|+.|.|.|...
T Consensus 82 ~f~gR~v~v~f~~~ 95 (104)
T d1o0pa_ 82 KFANRVVVTKYCDP 95 (104)
T ss_dssp CSSSSCCEEEEECH
T ss_pred EECCeEEEEEEcCH
Confidence 99999999999764
No 173
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.21 E-value=4.5e-06 Score=59.44 Aligned_cols=64 Identities=19% Similarity=0.239 Sum_probs=57.3
Q ss_pred hhHHHHHHHHhhhcCCeEEEEEeeC--CCccEEEEeCChHHHHHHHHHHcCceeCCeEEEEEEeCc
Q 006398 573 MDIKEDVEGECSKFGKLKHIFVEKD--SAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVP 636 (647)
Q Consensus 573 ~~~~~dl~~~F~~fG~V~~v~i~~~--~~G~afV~F~~~e~A~~A~~~lnG~~~~gr~i~v~~~~~ 636 (647)
++|.+.|...|.++|.|.+|.|-.. ..-.|-|...+.++|..|+..|+.+.||++.|.|+|++.
T Consensus 7 kelqq~L~~~f~~h~~V~sv~l~~~~dg~~~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~~ 72 (73)
T d2dgxa1 7 KELQQLLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLATG 72 (73)
T ss_dssp HHHHHHHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECCC
T ss_pred HHHHHHHHHHHHhheeEEEEEEEeccCCcEEEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEecC
Confidence 4567999999999999999999544 345799999999999999999999999999999999874
No 174
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.17 E-value=1.8e-06 Score=64.96 Aligned_cols=82 Identities=16% Similarity=0.323 Sum_probs=62.2
Q ss_pred CCCcceEEeccCCCCCCCCchhhhhhHHHHHHHHhhhcCCeEEEEEeeCCCccEEEEeCChHHHHHHHHHHcCceeCCeE
Q 006398 549 GVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKM 628 (647)
Q Consensus 549 ~~~~~~l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~~~G~afV~F~~~e~A~~A~~~lnG~~~~gr~ 628 (647)
++|--+|.|.=. .+.......+.+.|+.+|.+.|..||.|+-|++.. +..+|+|.+=+.|..|+. |+|..++|+.
T Consensus 12 GPpDgTIvV~i~-~~s~e~~~~FDe~l~~~Llq~l~~~GeViLvRFv~---d~mwVTF~dG~SAL~al~-l~g~~v~G~~ 86 (95)
T d1ufwa_ 12 GPLDATVVVNLQ-SPTLEEKNEFPEDLRTELMQTLGSYGTIVLVRINQ---GQMLVTFADSHSALSVLD-VDGMKVKGRA 86 (95)
T ss_dssp CCTTCEEEEEES-SCCHHHHHSCCHHHHHHHHHHHHHHSCCSEEEEET---TEEEEECSCSHHHHHHHH-GGGSEETTEE
T ss_pred CCCCcEEEEEec-cCCccccccCCHHHHHHHHHHHhhCCeEEEEEEeC---CeEEEEECCcHHHHHHhc-cCCeEEcceE
Confidence 344445555333 22221123455778999999999999999998855 579999999999999997 7999999999
Q ss_pred EEEEEeC
Q 006398 629 ITATFMV 635 (647)
Q Consensus 629 i~v~~~~ 635 (647)
|+|+.-.
T Consensus 87 l~It~~~ 93 (95)
T d1ufwa_ 87 VKISGPS 93 (95)
T ss_dssp EEEECCC
T ss_pred EEEecCC
Confidence 9998643
No 175
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.19 E-value=0.00096 Score=47.27 Aligned_cols=61 Identities=30% Similarity=0.300 Sum_probs=53.4
Q ss_pred HHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcCCceecCeEEEEEEee
Q 006398 375 DQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVT 437 (647)
Q Consensus 375 ~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~g~~~~g~~i~v~~~~ 437 (647)
+.|.+.|.+++.|..+.|.....|. -.|-|...+.++|..|+..|+-..|+++.|.|+++.
T Consensus 11 q~L~~~f~~h~~V~sv~l~~~~dg~--~~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~ 71 (73)
T d2dgxa1 11 QLLQEAFARHGKVKSVELSPHTDYQ--LKAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLAT 71 (73)
T ss_dssp HHHHHHHHHHSCEEEEEECSCCSTT--CCEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred HHHHHHHHhheeEEEEEEEeccCCc--EEEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEec
Confidence 5677789999999999887765443 369999999999999999999999999999999975
No 176
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.93 E-value=0.00052 Score=51.33 Aligned_cols=69 Identities=17% Similarity=0.184 Sum_probs=55.6
Q ss_pred CCCeEEEecCCCCCC---------HHHHHHHHHhcCCeeEEEEeeeCCCCCcccEEEEEecccccHHHHHHhcCCccCCc
Q 006398 255 DQRTVFAYQICLKAD---------ERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQ 325 (647)
Q Consensus 255 ~~~~v~v~~Lp~~~t---------~~~l~~~f~~~G~i~~v~~~~~~~tg~~~g~afV~f~~~~~a~~al~~~g~~~~g~ 325 (647)
+.-+|.|.=..+... -.+|.+.|..||.|.-|+++.+ ...|+|.+-+.|.+|+.++|..+.|+
T Consensus 14 pDgTIvV~i~~~s~e~~~~FDe~l~~~Llq~l~~~GeViLvRFv~d--------~mwVTF~dG~SAL~al~l~g~~v~G~ 85 (95)
T d1ufwa_ 14 LDATVVVNLQSPTLEEKNEFPEDLRTELMQTLGSYGTIVLVRINQG--------QMLVTFADSHSALSVLDVDGMKVKGR 85 (95)
T ss_dssp TTCEEEEEESSCCHHHHHSCCHHHHHHHHHHHHHHSCCSEEEEETT--------EEEEECSCSHHHHHHHHGGGSEETTE
T ss_pred CCcEEEEEeccCCccccccCCHHHHHHHHHHHhhCCeEEEEEEeCC--------eEEEEECCcHHHHHHhccCCeEEcce
Confidence 335777755543332 2457778899999999999844 68999999999999999999999999
Q ss_pred eEEEcc
Q 006398 326 PVMVKP 331 (647)
Q Consensus 326 ~i~v~~ 331 (647)
.|+|..
T Consensus 86 ~l~It~ 91 (95)
T d1ufwa_ 86 AVKISG 91 (95)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 999853
No 177
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.82 E-value=0.0042 Score=47.24 Aligned_cols=78 Identities=13% Similarity=0.147 Sum_probs=61.8
Q ss_pred cEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCC--CC-CcceEEEEEeCCHHHHHHHHHHcCCceecC-----eEEE
Q 006398 361 RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE--TG-HCKGFGFVQFARLEDARNALNLNGQLEIVG-----RAIK 432 (647)
Q Consensus 361 ~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~--~g-~~~g~afVef~~~~~A~~Al~~l~g~~~~g-----~~i~ 432 (647)
++|.|+.||+.+|++++.+.+...|.+........+ .+ ..-.-|||.|.+.++........+|..|-+ ....
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D~~g~~~~a~ 81 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLDNKGQEYPAI 81 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEECTTCCEEECE
T ss_pred ceEEEecCCCCCCHHHHHHHhCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEcCCCCEeeeE
Confidence 579999999999999999999999998887766652 22 123569999999999999999999987743 2456
Q ss_pred EEEeec
Q 006398 433 VSAVTD 438 (647)
Q Consensus 433 v~~~~~ 438 (647)
|.||.-
T Consensus 82 VE~AP~ 87 (91)
T d1uw4a_ 82 VEFAPF 87 (91)
T ss_dssp EEECSS
T ss_pred EEEcCc
Confidence 666543
No 178
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.69 E-value=0.0024 Score=48.58 Aligned_cols=68 Identities=10% Similarity=0.119 Sum_probs=56.3
Q ss_pred CeEEEecCCCCCCHHHHHHHHHhcCCeeEEEEeeeCCCCC--cccEEEEEecccccHHHHHH-hcCCccCC
Q 006398 257 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRR--SKGVGYVEFYDVMSVPMAIA-LSGQPLLG 324 (647)
Q Consensus 257 ~~v~v~~Lp~~~t~~~l~~~f~~~G~i~~v~~~~~~~tg~--~~g~afV~f~~~~~a~~al~-~~g~~~~g 324 (647)
.+|.|..||+++|++++.+.+..+|.+.-...+..+.+-. .-.-|||.|.+.++...... .+|..+.+
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D 72 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLD 72 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEEC
T ss_pred ceEEEecCCCCCCHHHHHHHhCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEc
Confidence 4799999999999999999999999988887777665422 33469999999999999987 88877643
No 179
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.21 E-value=0.044 Score=41.43 Aligned_cols=56 Identities=18% Similarity=0.277 Sum_probs=45.9
Q ss_pred CcEEEEcCCCCCCCHHHHHHhhccCCcEEEEEeccCCCCCcceEEEEEeCCHHHHHHHHHHcC
Q 006398 360 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNG 422 (647)
Q Consensus 360 ~~~l~v~nLp~~~~e~~l~~~f~~~G~v~~v~i~~~~~g~~~g~afVef~~~~~A~~Al~~l~ 422 (647)
-.-||....|......+|.++|++||.|.--.|-.. -|||...+.++|..++..+.
T Consensus 15 RdHVf~~tFP~~Wk~~dI~~lFSpfG~V~VswIddT-------Sa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 15 RDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDT-------SAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp CCSEEEEECCTTCCHHHHHHHHTTTCSCCCEEEETT-------EEEEECSCHHHHHHHHHHHH
T ss_pred cceeEEEeCCcccchhHHHHHhcCCCceEEEEecCc-------eEEEEecCHHHHHHHHHHhc
Confidence 456888899999999999999999998755555322 59999999999999887543
No 180
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.92 E-value=0.16 Score=38.23 Aligned_cols=54 Identities=15% Similarity=0.241 Sum_probs=42.9
Q ss_pred eEEeccCCCCCCCCchhhhhhHHHHHHHHhhhcCCeEEEEEeeCCCccEEEEeCChHHHHHHHHHHc
Q 006398 554 CLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALH 620 (647)
Q Consensus 554 ~l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~~~~G~afV~F~~~e~A~~A~~~ln 620 (647)
-||.-.. |.+ |+ ..||+++|++||.|.---|.. ..|||...+.++|..+++.+.
T Consensus 17 HVf~~tF--P~~------Wk--~~dI~~lFSpfG~V~VswIdd---TSa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 17 HVLHVTF--PKE------WK--TSDLYQLFSAFGNIQISWIDD---TSAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp SEEEEEC--CTT------CC--HHHHHHHHTTTCSCCCEEEET---TEEEEECSCHHHHHHHHHHHH
T ss_pred eeEEEeC--Ccc------cc--hhHHHHHhcCCCceEEEEecC---ceEEEEecCHHHHHHHHHHhc
Confidence 4777777 544 33 699999999999988766633 479999999999999998765
No 181
>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=64.50 E-value=15 Score=25.40 Aligned_cols=48 Identities=15% Similarity=0.096 Sum_probs=33.9
Q ss_pred HHHHHHHhhhcC-CeEEEEEee-CCCccEEEEeCChHHHHHHHHHHcCcee
Q 006398 576 KEDVEGECSKFG-KLKHIFVEK-DSAGFVYLRFENTQSAFAAQRALHGRWF 624 (647)
Q Consensus 576 ~~dl~~~F~~fG-~V~~v~i~~-~~~G~afV~F~~~e~A~~A~~~lnG~~~ 624 (647)
...+...|...| +|.++.+.. ..++..-+.+++++.|..++.. +|..+
T Consensus 13 L~~v~~~L~~~~InI~~~y~~~~~~~~~~vl~vdd~~~a~~~L~~-~G~~v 62 (71)
T d2f06a1 13 LAKVLGFLSAEGVFIEYMYSFANNNVANVVIRPSNMDKCIEVLKE-KKVDL 62 (71)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEESCHHHHHHHHHH-TTCEE
T ss_pred HHHHHHHHHHCCCCEEEEEEEcCCCcEEEEEEECCHHHHHHHHHH-CCCEE
Confidence 578889999988 788877633 3344446667888888888876 66543
No 182
>d2f06a2 d.58.18.11 (A:1-70) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=51.47 E-value=33 Score=23.50 Aligned_cols=58 Identities=14% Similarity=0.166 Sum_probs=40.0
Q ss_pred eEEeccCCCCCCCCchhhhhhHHHHHHHHhhhcC-CeEEEEEee-CCCccEEEEeCChHHHHHHHHHHcCcee
Q 006398 554 CLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFG-KLKHIFVEK-DSAGFVYLRFENTQSAFAAQRALHGRWF 624 (647)
Q Consensus 554 ~l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG-~V~~v~i~~-~~~G~afV~F~~~e~A~~A~~~lnG~~~ 624 (647)
.||+.|- |-. ...|..+|+.-| +|.++.+-. ...|..-+-..+++.|...+.. +|..+
T Consensus 7 sV~~eNk--pG~----------L~~v~~~~~~~~inI~sl~v~~t~~~~i~Riiv~~~e~a~~~L~~-~g~~v 66 (70)
T d2f06a2 7 SIFLENK--SGR----------LTEVTEVLAKENINLSALCIAENADFGILRGIVSDPDKAYKALKD-NHFAV 66 (70)
T ss_dssp EEEECSS--SSH----------HHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEESCHHHHHHHHHH-TTCCE
T ss_pred EEEEeCC--CcH----------HHHHHHHHHHCCCCEEEEEEeecCCCCEEEEEECChHHHHHHHHH-CCCEE
Confidence 5788888 533 689999999988 788877632 2345555566778888777754 56543
No 183
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=49.32 E-value=13 Score=28.76 Aligned_cols=41 Identities=10% Similarity=0.070 Sum_probs=31.3
Q ss_pred HHHHHHhhhcCCeEEEEEeeCCCccEEEEeCChHHHHHHHHHHcC
Q 006398 577 EDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHG 621 (647)
Q Consensus 577 ~dl~~~F~~fG~V~~v~i~~~~~G~afV~F~~~e~A~~A~~~lnG 621 (647)
.+|.+.+..+|.+ . +-.+-.++|+.|.+.++|..|++.|..
T Consensus 60 ~~~~~~L~~~g~~---~-MSGSGstvF~~f~~~~~a~~~~~~l~~ 100 (120)
T d1oj4a2 60 DAVLSWLLEYAPS---R-LTGTGACVFAEFDTESEARQVLEQAPE 100 (120)
T ss_dssp HHHHHHHTTTSCE---E-ECTTSSCEEEEESSHHHHHHHHHHSCG
T ss_pred HHHHHHHhhcccc---e-ecCCCCEEEEEeCCHHHHHHHHHHcCc
Confidence 5566667888863 2 454556779999999999999999853
No 184
>d2okqa1 d.58.4.18 (A:1-117) Hypothetical protein YbaA {Shigella flexneri [TaxId: 623]}
Probab=41.98 E-value=22 Score=27.09 Aligned_cols=69 Identities=14% Similarity=0.199 Sum_probs=49.3
Q ss_pred CCCCCchhhhhhHHHHHHHHhhhcCCeEEEEEee----CC----------------CccEEEEeCChHHHHHHHHHH---
Q 006398 563 PKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEK----DS----------------AGFVYLRFENTQSAFAAQRAL--- 619 (647)
Q Consensus 563 p~~~~d~~~~~~~~~dl~~~F~~fG~V~~v~i~~----~~----------------~G~afV~F~~~e~A~~A~~~l--- 619 (647)
|.....-+.|..+...-..+|..||.+..+.+.. .+ --|++|+|.+.+....|.+.+
T Consensus 10 ~VP~~n~~aY~~~A~~a~~v~~e~GAl~~vEcwgdDvp~gk~t~F~~av~ak~~EtVvFSwi~wpska~RD~~~~kvm~D 89 (117)
T d2okqa1 10 AVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAEENEEVVFSWIEYPSKEVRDAANQKMMSD 89 (117)
T ss_dssp EEEGGGHHHHHHHHHHHHHHHHHTTCSEEEEEEEEECCCCSSCCHHHHTTCCTTEEEEEEEEEESCHHHHHHHHHHHHTC
T ss_pred ECchhhHHHHHHHHHHHHHHHHHhCCeeeeeeecccCCCCcccCHHHHhcCCCCCEEEEEEEEeCCHHHHHHHHHHHhhC
Confidence 3334456889999999999999999999887722 11 137899999998888876554
Q ss_pred -------cCceeCCeEEEE
Q 006398 620 -------HGRWFAGKMITA 631 (647)
Q Consensus 620 -------nG~~~~gr~i~v 631 (647)
+...|.|+++..
T Consensus 90 prm~~~~~~mPFDgkRmi~ 108 (117)
T d2okqa1 90 PRMKEFGESMPFDGKRMIY 108 (117)
T ss_dssp HHHHHTTSSCSSCTTTCEE
T ss_pred ccccccCCCCCCcccceee
Confidence 235666666543
No 185
>d2fiua1 d.58.4.16 (A:1-95) Hypothetical protein Atu0297 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=33.48 E-value=60 Score=23.42 Aligned_cols=52 Identities=19% Similarity=0.114 Sum_probs=35.8
Q ss_pred CCchhhhhhHHHHHHHHhhhcCCeEEE------EEeeCC-CccEEEEeCChHHHHHHHH
Q 006398 566 ETYEEFDMDIKEDVEGECSKFGKLKHI------FVEKDS-AGFVYLRFENTQSAFAAQR 617 (647)
Q Consensus 566 ~~d~~~~~~~~~dl~~~F~~fG~V~~v------~i~~~~-~G~afV~F~~~e~A~~A~~ 617 (647)
.+|++.+.+..+-+..++.+||.-.-+ .+.... .-.+.|+|.+.+.|..+..
T Consensus 12 i~d~e~~~~Y~~~~~~~~~~~GG~~l~rg~~~~~~EG~~~~~~viieFps~e~A~~~~~ 70 (95)
T d2fiua1 12 VRDSERYKDYVSTAKPAFERFGANFLARGGSVTELEGTARARNVVIEFPSVQHAIDCYN 70 (95)
T ss_dssp ESCHHHHHHHHHHHHHHHHHTTCEEEEESCCEEEEESCCCSEEEEEEESSHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHHHHHHHcCCEEEEECCceEEecCCCCceEEEEEcCCHHHHHHHHC
Confidence 456788888888999999999842111 111222 2357899999999988764
No 186
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]}
Probab=27.56 E-value=63 Score=24.29 Aligned_cols=45 Identities=20% Similarity=0.225 Sum_probs=33.4
Q ss_pred HHHHHHHhhhcCCeEEEEEeeCCCccEEEEeCChHHHHHHHHHHcCc
Q 006398 576 KEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGR 622 (647)
Q Consensus 576 ~~dl~~~F~~fG~V~~v~i~~~~~G~afV~F~~~e~A~~A~~~lnG~ 622 (647)
..+|.+.+..+|... +.| -.+-.++|.-|.+.++|..|.+.|...
T Consensus 65 l~~~~~~l~~~g~~~-~~m-SGSGst~F~l~~~~~~a~~~~~~l~~~ 109 (120)
T d1ueka2 65 LKEVRGRMRALGLRG-VLM-SGSGSAFFGLAEGPDHARRAAEALRAW 109 (120)
T ss_dssp HHHHHHHHHHTTCEE-EEE-CTTSSCEEEECSSHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhhhhh-eee-cCCCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 366677777888644 333 444456899999999999999999765
No 187
>d1sc6a3 d.58.18.1 (A:327-410) Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain {Escherichia coli [TaxId: 562]}
Probab=23.33 E-value=1.1e+02 Score=21.19 Aligned_cols=58 Identities=17% Similarity=0.347 Sum_probs=36.0
Q ss_pred eEEeccCCCCCCCCchhhhhhHHHHHHHHhhhcC-CeEEEEEeeCC-CccEEEEeCC----hHHHHHHHHHHcC
Q 006398 554 CLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFG-KLKHIFVEKDS-AGFVYLRFEN----TQSAFAAQRALHG 621 (647)
Q Consensus 554 ~l~V~nl~~p~~~~d~~~~~~~~~dl~~~F~~fG-~V~~v~i~~~~-~G~afV~F~~----~e~A~~A~~~lnG 621 (647)
.|+|.|-..|- +...|..+|+..| +|..+.+.... .|++++.+.. .+++..++..+.|
T Consensus 13 rl~i~~~d~PG----------vla~I~~~l~~~~iNI~~~~~~~~~~~~~a~~~i~~D~~~~~~v~~~i~~l~~ 76 (84)
T d1sc6a3 13 RLMHIHENRPG----------VLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIEADEDVAEKALQAMKAIPG 76 (84)
T ss_dssp EEEEEEESCTT----------HHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEEECCHHHHHHHHHHHHTSTT
T ss_pred EEEEEeCCcCC----------HHHHHHHHHHHcCCCHHHhccccCCCCcEEEEEEECCCCCHHHHHHHHHCCCC
Confidence 55555553353 3789999999997 77777775543 3788766643 3334444444444
No 188
>d2od0a1 d.198.5.2 (A:3-105) Hypothetical protein VP1028 {Vibrio parahaemolyticus [TaxId: 670]}
Probab=21.88 E-value=82 Score=23.05 Aligned_cols=58 Identities=14% Similarity=0.121 Sum_probs=35.7
Q ss_pred HHHHHHHHhhhcCCeEEEEE------eeCC-------CccEEEEeCChHHHHHHHHHHcCcee----CCeEEEEEEe
Q 006398 575 IKEDVEGECSKFGKLKHIFV------EKDS-------AGFVYLRFENTQSAFAAQRALHGRWF----AGKMITATFM 634 (647)
Q Consensus 575 ~~~dl~~~F~~fG~V~~v~i------~~~~-------~G~afV~F~~~e~A~~A~~~lnG~~~----~gr~i~v~~~ 634 (647)
|.+++.++|+.+|.|..-++ ..++ .+..||.-. .+...++...+...| .|+++.+.|+
T Consensus 3 ~l~~~l~ll~~lG~I~~k~MFGG~g~~~~g~Mfa~v~~~~Lylr~~--~~~~~~~~~~g~~p~~y~~~g~~~~~~y~ 77 (103)
T d2od0a1 3 ILKDSMKLFEALGTIKSRSMFGGFGLFADETMFALVVNNQLHIRAD--QQTSSDFETQGLKPYVYKKRGFPVVTKYY 77 (103)
T ss_dssp HHHHHHHHHGGGSCCEEEEETTEEEEEETTEEEEEEETTEEEEECC--HHHHHHHHHTTCCCCEEEETTEEEECSEE
T ss_pred hHHHHHHHHhccCCeeEeeccCcEEEEECCEEEEEEECCEEEEEcC--HHHHHHHHHcCCcccccCCCCccccCCeE
Confidence 56889999999999987554 2332 344566633 333445566554543 4777766664
No 189
>d1q4ra_ d.58.4.4 (A:) Hypothetical protein AT3G17210.1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=20.03 E-value=1.1e+02 Score=22.06 Aligned_cols=45 Identities=16% Similarity=0.193 Sum_probs=33.1
Q ss_pred hhhhhhHHHHHHHHhhhcCCeEEEEEeeC------CCcc--E-EEEeCChHHHH
Q 006398 569 EEFDMDIKEDVEGECSKFGKLKHIFVEKD------SAGF--V-YLRFENTQSAF 613 (647)
Q Consensus 569 ~~~~~~~~~dl~~~F~~fG~V~~v~i~~~------~~G~--a-fV~F~~~e~A~ 613 (647)
.+....+.+.|..+......|..+.+-.+ ..|| | ++.|++.++-+
T Consensus 16 ~~~~~~~~~~l~~L~~~ip~i~~~~~G~~~~~~~~~~~y~~~l~~~F~s~e~l~ 69 (103)
T d1q4ra_ 16 PEKIEELIKGYANLVNLIEPMKAFHWGKDVSIENLHQGYTHIFESTFESKEAVA 69 (103)
T ss_dssp HHHHHHHHHHHHTHHHHCTTCCEEEEEECCCSSSCSTTCCEEEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHhhhhCceeEEEEeccccCCcccCCCccEEEEEEECCHHHHH
Confidence 46677788888888888888999887433 3454 5 77899887644
Done!