Query 006399
Match_columns 647
No_of_seqs 305 out of 802
Neff 5.1
Searched_HMMs 46136
Date Thu Mar 28 22:44:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006399.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006399hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1021 Acetylglucosaminyltran 100.0 4.9E-65 1.1E-69 560.9 27.6 366 265-645 76-460 (464)
2 PF03016 Exostosin: Exostosin 100.0 2.7E-54 5.9E-59 443.1 22.2 279 315-598 2-302 (302)
3 KOG2264 Exostosin EXT1L [Signa 100.0 4.5E-35 9.8E-40 316.6 19.2 310 297-638 175-524 (907)
4 KOG1022 Acetylglucosaminyltran 99.9 4E-24 8.6E-29 231.8 16.1 305 293-627 75-394 (691)
5 PF00852 Glyco_transf_10: Glyc 97.2 0.00076 1.6E-08 73.1 7.4 152 448-606 140-305 (349)
6 cd03801 GT1_YqgM_like This fam 97.2 0.0024 5.3E-08 63.9 10.3 95 524-621 267-364 (374)
7 cd03814 GT1_like_2 This family 97.1 0.0027 5.9E-08 64.8 9.7 94 524-620 258-353 (364)
8 cd03794 GT1_wbuB_like This fam 96.8 0.008 1.7E-07 61.1 10.4 95 524-621 286-388 (394)
9 PLN02871 UDP-sulfoquinovose:DA 96.8 0.0046 1E-07 68.7 9.2 113 524-640 323-442 (465)
10 cd03821 GT1_Bme6_like This fam 96.8 0.0066 1.4E-07 61.6 9.6 93 524-621 273-368 (375)
11 PF00534 Glycos_transf_1: Glyc 96.7 0.0042 9.2E-08 58.4 6.7 94 508-609 73-168 (172)
12 cd03822 GT1_ecORF704_like This 96.6 0.012 2.6E-07 60.3 9.9 95 524-622 259-357 (366)
13 cd05844 GT1_like_7 Glycosyltra 96.6 0.016 3.4E-07 60.6 10.7 95 524-621 256-359 (367)
14 cd03820 GT1_amsD_like This fam 96.4 0.0061 1.3E-07 61.0 6.4 96 524-621 244-341 (348)
15 cd03818 GT1_ExpC_like This fam 96.4 0.021 4.5E-07 61.6 10.4 106 508-621 281-389 (396)
16 TIGR03449 mycothiol_MshA UDP-N 96.3 0.021 4.5E-07 61.4 10.3 107 509-623 284-392 (405)
17 cd03809 GT1_mtfB_like This fam 96.3 0.015 3.2E-07 59.6 8.6 93 524-621 264-358 (365)
18 cd04962 GT1_like_5 This family 96.3 0.026 5.7E-07 59.0 10.6 94 525-621 263-359 (371)
19 cd03819 GT1_WavL_like This fam 96.3 0.027 5.9E-07 58.2 10.7 94 524-620 255-353 (355)
20 TIGR03088 stp2 sugar transfera 96.1 0.035 7.6E-07 58.8 10.2 96 524-622 264-362 (374)
21 PRK15427 colanic acid biosynth 96.0 0.039 8.4E-07 60.6 10.3 105 509-621 280-394 (406)
22 cd03798 GT1_wlbH_like This fam 95.8 0.03 6.6E-07 56.4 8.1 95 524-621 270-365 (377)
23 cd04951 GT1_WbdM_like This fam 95.8 0.061 1.3E-06 55.5 10.3 92 525-621 255-349 (360)
24 cd03804 GT1_wbaZ_like This fam 95.8 0.028 6.1E-07 59.0 7.9 104 508-621 242-345 (351)
25 cd03800 GT1_Sucrose_synthase T 95.6 0.03 6.5E-07 58.9 7.5 95 524-621 294-391 (398)
26 cd03808 GT1_cap1E_like This fa 95.6 0.026 5.6E-07 56.8 6.5 93 525-620 256-351 (359)
27 cd03823 GT1_ExpE7_like This fa 95.6 0.08 1.7E-06 53.8 10.1 87 524-613 254-343 (359)
28 PRK10307 putative glycosyl tra 95.4 0.05 1.1E-06 58.9 8.2 96 524-622 295-397 (412)
29 cd03807 GT1_WbnK_like This fam 95.3 0.087 1.9E-06 53.3 9.4 93 524-621 260-355 (365)
30 PRK15484 lipopolysaccharide 1, 95.0 0.15 3.3E-06 55.2 10.4 96 524-622 268-367 (380)
31 cd03802 GT1_AviGT4_like This f 94.9 0.12 2.6E-06 53.1 9.0 70 524-598 235-305 (335)
32 cd03806 GT1_ALG11_like This fa 94.8 0.24 5.1E-06 54.7 11.7 104 509-621 306-415 (419)
33 cd03805 GT1_ALG2_like This fam 94.7 0.081 1.8E-06 56.1 7.5 94 524-621 291-387 (392)
34 cd03825 GT1_wcfI_like This fam 94.7 0.11 2.3E-06 53.9 8.0 95 524-621 256-353 (365)
35 cd03799 GT1_amsK_like This is 94.6 0.26 5.5E-06 50.8 10.5 95 524-621 247-350 (355)
36 PRK14098 glycogen synthase; Pr 94.5 0.15 3.3E-06 57.7 9.4 96 525-625 374-478 (489)
37 TIGR02149 glgA_Coryne glycogen 94.5 0.074 1.6E-06 56.3 6.4 95 524-621 272-375 (388)
38 TIGR02095 glgA glycogen/starch 94.4 0.19 4.2E-06 55.9 9.9 93 525-622 358-462 (473)
39 PRK09814 beta-1,6-galactofuran 94.4 0.094 2E-06 55.9 7.1 89 524-618 218-317 (333)
40 cd04955 GT1_like_6 This family 94.3 0.26 5.6E-06 51.0 10.0 103 508-621 248-353 (363)
41 PRK00654 glgA glycogen synthas 94.0 0.2 4.3E-06 56.0 8.8 93 526-623 350-453 (466)
42 cd03817 GT1_UGDG_like This fam 93.9 0.6 1.3E-05 47.5 11.4 90 524-617 270-361 (374)
43 cd03796 GT1_PIG-A_like This fa 93.7 0.31 6.7E-06 52.8 9.4 98 524-626 261-361 (398)
44 cd03816 GT1_ALG1_like This fam 93.6 0.42 9.1E-06 52.5 10.3 124 483-620 270-404 (415)
45 PRK09922 UDP-D-galactose:(gluc 93.5 0.28 6.1E-06 52.3 8.5 86 508-598 236-321 (359)
46 cd03811 GT1_WabH_like This fam 93.2 0.98 2.1E-05 45.1 11.5 89 525-616 256-350 (353)
47 PRK14099 glycogen synthase; Pr 93.2 0.44 9.5E-06 54.0 9.9 97 525-625 361-471 (485)
48 cd03795 GT1_like_4 This family 93.0 0.83 1.8E-05 47.1 10.8 94 524-620 255-354 (357)
49 cd04949 GT1_gtfA_like This fam 93.0 0.16 3.5E-06 53.7 5.7 94 525-621 271-367 (372)
50 TIGR02472 sucr_P_syn_N sucrose 92.9 0.19 4.2E-06 55.5 6.4 94 526-622 330-430 (439)
51 cd03792 GT1_Trehalose_phosphor 92.7 0.98 2.1E-05 48.2 11.3 107 508-622 252-361 (372)
52 cd04946 GT1_AmsK_like This fam 92.6 0.71 1.5E-05 50.6 10.2 93 525-620 301-399 (407)
53 cd03791 GT1_Glycogen_synthase_ 91.9 0.71 1.5E-05 51.0 9.3 92 525-621 363-465 (476)
54 TIGR03087 stp1 sugar transfera 91.8 0.5 1.1E-05 51.1 7.9 92 525-622 290-386 (397)
55 PLN02949 transferase, transfer 91.4 0.35 7.5E-06 54.6 6.2 96 524-622 346-446 (463)
56 KOG2619 Fucosyltransferase [Ca 91.3 0.95 2E-05 50.0 9.1 157 447-608 160-328 (372)
57 cd03812 GT1_CapH_like This fam 90.7 1.7 3.6E-05 45.0 10.0 70 525-598 259-328 (358)
58 PF13524 Glyco_trans_1_2: Glyc 90.6 0.44 9.6E-06 40.9 4.8 81 536-620 2-84 (92)
59 cd03793 GT1_Glycogen_synthase_ 89.8 0.33 7.1E-06 56.4 4.3 111 523-634 465-589 (590)
60 PHA01633 putative glycosyl tra 89.8 0.52 1.1E-05 51.3 5.5 94 524-622 215-329 (335)
61 cd03813 GT1_like_3 This family 89.7 0.51 1.1E-05 52.9 5.6 95 524-621 362-465 (475)
62 PRK15490 Vi polysaccharide bio 89.4 1.6 3.6E-05 50.7 9.5 94 525-621 465-564 (578)
63 PHA01630 putative group 1 glyc 87.6 0.95 2.1E-05 48.8 5.7 95 524-621 201-319 (331)
64 TIGR02468 sucrsPsyn_pln sucros 87.5 1 2.2E-05 55.6 6.5 93 527-622 562-660 (1050)
65 PLN02939 transferase, transfer 84.9 1.5 3.2E-05 53.9 5.9 102 527-632 851-967 (977)
66 cd04950 GT1_like_1 Glycosyltra 80.8 1.5 3.3E-05 47.3 3.7 67 524-597 265-336 (373)
67 PRK15179 Vi polysaccharide bio 79.9 7.7 0.00017 46.4 9.3 92 525-621 584-682 (694)
68 PLN00142 sucrose synthase 78.3 6.1 0.00013 48.0 7.9 94 528-624 661-762 (815)
69 PLN02316 synthase/transferase 76.1 4.3 9.4E-05 50.4 6.0 96 528-626 915-1027(1036)
70 PF13692 Glyco_trans_1_4: Glyc 74.9 3.2 6.9E-05 37.3 3.5 76 509-596 54-130 (135)
71 cd01635 Glycosyltransferase_GT 73.2 15 0.00033 34.6 7.8 78 482-565 135-213 (229)
72 TIGR02918 accessory Sec system 72.8 24 0.00051 40.5 10.5 94 525-621 385-488 (500)
73 TIGR01133 murG undecaprenyldip 70.9 7.3 0.00016 40.7 5.5 82 525-611 243-333 (348)
74 PRK13608 diacylglycerol glucos 70.2 12 0.00025 41.0 7.1 83 525-616 266-355 (391)
75 KOG1387 Glycosyltransferase [C 69.3 25 0.00055 39.0 9.1 129 483-617 306-443 (465)
76 TIGR02470 sucr_synth sucrose s 69.1 15 0.00032 44.7 8.0 90 533-625 644-740 (784)
77 PLN02605 monogalactosyldiacylg 68.6 29 0.00064 37.6 9.7 78 525-612 275-361 (382)
78 PLN02275 transferase, transfer 64.9 36 0.00079 36.7 9.5 93 482-584 261-358 (371)
79 COG0438 RfaG Glycosyltransfera 63.7 12 0.00025 36.6 4.9 94 525-621 269-365 (381)
80 cd03788 GT1_TPS Trehalose-6-Ph 61.7 8.9 0.00019 43.2 4.2 89 523-616 351-445 (460)
81 PRK10125 putative glycosyl tra 59.6 22 0.00048 39.4 6.7 67 524-594 298-364 (405)
82 cd03785 GT1_MurG MurG is an N- 56.3 71 0.0015 33.4 9.6 83 524-612 244-337 (350)
83 PRK13609 diacylglycerol glucos 54.3 43 0.00093 36.0 7.7 80 525-613 266-352 (380)
84 TIGR02400 trehalose_OtsA alpha 52.2 32 0.0007 39.0 6.6 83 523-611 346-435 (456)
85 PRK00726 murG undecaprenyldiph 50.5 23 0.00051 37.5 4.9 82 525-610 245-335 (357)
86 PRK05749 3-deoxy-D-manno-octul 48.1 19 0.00041 39.5 3.9 86 525-614 312-403 (425)
87 smart00672 CAP10 Putative lipo 46.9 1.6E+02 0.0034 31.0 10.3 131 479-612 81-227 (256)
88 TIGR00236 wecB UDP-N-acetylglu 45.6 2.1E+02 0.0046 30.5 11.3 86 508-608 255-343 (365)
89 PF00919 UPF0004: Uncharacteri 38.8 45 0.00098 30.0 4.2 42 319-369 1-42 (98)
90 PLN02501 digalactosyldiacylgly 37.3 83 0.0018 38.2 7.0 38 527-565 613-650 (794)
91 PLN02846 digalactosyldiacylgly 32.7 1.1E+02 0.0024 35.1 6.9 38 528-566 296-333 (462)
92 PLN03063 alpha,alpha-trehalose 31.5 1.2E+02 0.0025 37.2 7.2 83 524-611 367-456 (797)
93 TIGR03590 PseG pseudaminic aci 29.6 1.2E+02 0.0026 31.8 6.2 33 524-562 233-265 (279)
94 COG2247 LytB Putative cell wal 29.0 57 0.0012 35.8 3.6 43 524-568 124-166 (337)
95 PRK00025 lpxB lipid-A-disaccha 28.6 54 0.0012 35.0 3.5 85 525-616 254-358 (380)
96 PF13528 Glyco_trans_1_3: Glyc 25.1 1.4E+02 0.003 31.0 5.7 112 479-599 191-318 (318)
97 PF07038 DUF1324: Protein of u 23.4 59 0.0013 26.1 1.8 40 530-572 6-46 (59)
98 COG0297 GlgA Glycogen synthase 20.6 2.4E+02 0.0052 32.7 6.8 101 524-626 360-471 (487)
No 1
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=100.00 E-value=4.9e-65 Score=560.88 Aligned_cols=366 Identities=40% Similarity=0.630 Sum_probs=315.5
Q ss_pred CCCCCCchhhHHHHhhhhhhccCCCCCCCCCccccccCCCccccchhhhhcCCCcEEEecCCCCCCcCCc--ccCcchhh
Q 006399 265 MRPSSSSVRDRELLSAKVEIENAPVSWNTPELHASVFRNVSIFKRSYELMESLLKVYIYKEGEKPIFHQP--IMRGIYAS 342 (647)
Q Consensus 265 ~~~~w~~~~d~~l~~a~~~i~~a~~~~~~~~~~~~~y~~~scF~~SY~cm~~~fKVYVYp~~~~pi~h~~--~~~~iYas 342 (647)
-...++...+.+|+.....+. .|++...|..+|..|+..+|||+|.+++.+.+|.+ +.+++|++
T Consensus 76 ~~~~~~~~F~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 141 (464)
T KOG1021|consen 76 YVYNLPSGFDVSLLLFHKQIP--------------TSPNNKKFMCSYKLNEKRGKVYVYHEGNKPLFHTPSWCLTDQYAS 141 (464)
T ss_pred eeeccchhhhhhhhccCcccc--------------ccCcchhhhhhhhhhcccCceEEecCCCCccccCCCcccccchhH
Confidence 455667777888877665544 67788888899999999999999999988888877 89999999
Q ss_pred HHHHHHHHh-hCCccccCCCCCceEEEEeccchhhH-HhhhhhhhhhhHHHHHHHHHHHHHHhhcCcccccCCCccEEEE
Q 006399 343 EGWFMKLME-GNRKFVVRDPRKAHLFYLPFSSQMLR-IALSEQKLQNHQDLQNYLKTYVKTISRKYRFWNRTGGTDHFVV 420 (647)
Q Consensus 343 E~~F~~~Le-~sS~~rT~DPeEA~LFyVPfs~~~l~-~~ly~~~~~~~~~L~~~l~~yv~~I~~~yPyWNRsgGrDHflv 420 (647)
|++||+.|+ ..++|||.||++||+||||||+.+.. .+++.++......+...+.+|+..+++++|||||++|+|||++
T Consensus 142 E~~~~~~~~~~~~~~Rt~dp~~Ad~f~vPf~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~W~Rs~G~DH~~v 221 (464)
T KOG1021|consen 142 EGIFHNRMLRRESAFRTLDPLEADAFYVPFYASLDYNRALLWPDERVNAILRSILQDYIVALLSKQPYWNRSSGRDHFFV 221 (464)
T ss_pred HHHHHHHHhcccCceecCChhhCcEEEEcceeeEehhhhcccCCcccchHHHHHHHHHHHHHHhcCchhhccCCCceEEE
Confidence 999999996 34799999999999999999998875 5555554333345567778888888899999999999999999
Q ss_pred eecCCCccch---hHhhhhHhhheec-ccCCCCcccC-cceeCcccccCCCCCcC--CCCCCCCCCCCceEEEEeec-cC
Q 006399 421 ACHDWAPKFT---GQHLRNCIKALCN-ADVSKGFKIG-MDTSLPVTYIRSAEAPL--DNLGGNPPLKRSTLAFFAGR-MH 492 (647)
Q Consensus 421 ~~hdwgp~~t---~~~~~n~IraL~n-as~~~~FRpg-~DVsIP~~~~~~~~~pl--~~l~~~~p~~R~~LafFaG~-~~ 492 (647)
+||+|++... .....+.|+.+|+ ++.+.+|.+. +||+||++....+..+. .++...+..+|++|+||+|+ .+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~i~~~~n~a~ls~~~~~~~~dv~iP~~~~~~~~~~~~~~~~~~~~~~~R~~L~~F~G~~~~ 301 (464)
T KOG1021|consen 222 ACHDWGDFRRRSDWGASISLIPEFCNGALLSLEFFPWNKDVAIPYPTIPHPLSPPENSWQGGVPFSNRPILAFFAGAPAG 301 (464)
T ss_pred eCCcchheeeccchhhHHHHHHhhCCcceeecccccCCCcccCCCccCcCccCccccccccCCCCCCCceEEEEeccccC
Confidence 9999998765 3456677888888 7788999999 99999997554443333 34566667899999999999 89
Q ss_pred CcchHHHHHHhhcCCCCeEEecCCCCCC---cchhhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCC
Q 006399 493 GYLRPILLNFWENKVDDMKIFGPMPHDV---EGKRIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPP 569 (647)
Q Consensus 493 G~iR~~L~~~w~n~~~dv~I~~~c~~~~---~g~~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LP 569 (647)
|.+|+.|+++|++ +++......|+.+. .+...|.+.|++|+|||||+|++++|+|+||||.+|||||||+|++.+|
T Consensus 302 ~~iR~~L~~~~~~-~~~~~~~~~~~~g~~~~~~~~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lp 380 (464)
T KOG1021|consen 302 GQIRSILLDLWKK-DPDTEVFVNCPRGKVSCDRPLNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLP 380 (464)
T ss_pred CcHHHHHHHHhhc-CcCccccccCCCCccccCCcchHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccC
Confidence 9999999999987 66666667777653 2368899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCceEEEEcCCChhhH-HHHHcCCCHHHHHHHHHHHH-hhhheeEecc--CCCCccHHHHHHHHHHHhhhcccc
Q 006399 570 FFEVLNWEAFSVFVQEKDIPNL-RNILLSIPEERYLAMQSRVK-MVQKHFLWHK--KPKKYDIFHMVLHSIWYNRLFNTR 645 (647)
Q Consensus 570 FsdVLDWs~fSV~Ipe~dI~~L-~~iL~sIs~e~i~~Mr~~l~-~vq~~Flw~~--~p~~~DaFhmiL~slwlRRl~~~~ 645 (647)
|++++||++|||+|++++++++ +++|.+|+.+++.+||++++ .+++||+|+. +++.+|||||+++++|+|++.+.+
T Consensus 381 f~~~~d~~~fSV~v~~~~v~~~~~~iL~~i~~~~~~~m~~~v~~~v~r~~~~~~~~~~~~~da~~~~~~~v~~r~~~~~~ 460 (464)
T KOG1021|consen 381 FGDVLDWTEFSVFVPEKDVPELIKNILLSIPEEEVLRMRENVIRLVPRHFLKKPPGPPKRGDAFHMILHSLWRRLHKLRS 460 (464)
T ss_pred cCCCccceEEEEEEEHHHhhhHHHHHHHhcCHHHHHHHHHHHHHHHHhhEEeCCCCCCCcchhHHHHHhhhhhccccccc
Confidence 9999999999999999999998 99999999999999999999 4999999998 788899999999999999987653
No 2
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=100.00 E-value=2.7e-54 Score=443.09 Aligned_cols=279 Identities=33% Similarity=0.502 Sum_probs=214.3
Q ss_pred cCCCcEEEecCCCC----------CCcCCcccCcchhhHHHHHHHHhhCCccccCCCCCceEEEEeccchhhHHhhhhhh
Q 006399 315 ESLLKVYIYKEGEK----------PIFHQPIMRGIYASEGWFMKLMEGNRKFVVRDPRKAHLFYLPFSSQMLRIALSEQK 384 (647)
Q Consensus 315 ~~~fKVYVYp~~~~----------pi~h~~~~~~iYasE~~F~~~Le~sS~~rT~DPeEA~LFyVPfs~~~l~~~ly~~~ 384 (647)
.++|||||||++.+ ...+......+|++|.+|++.|+. |+++|.||+|||+||||++..+...+...
T Consensus 2 ~~~lkVYVY~lp~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~l~~-s~~~T~dp~eAdlF~vP~~~~~~~~~~~~-- 78 (302)
T PF03016_consen 2 HRGLKVYVYPLPPKFNKDLLDPREDEQCSWYETSQYALEVILHEALLN-SPFRTDDPEEADLFFVPFYSSCYFHHWWG-- 78 (302)
T ss_pred CCCCEEEEEeCCccccccceeccccccCCCcccccchHHHHHHHHHHh-CCcEeCCHHHCeEEEEEcccccccccccC--
Confidence 57899999998821 112345677899999999999995 79999999999999999988765210000
Q ss_pred hhhhHHHHHHHHHHHHHHhhcCcccccCCCccEEEEeecCCCccch---hHhhhhHhhhe-eccc-CCCCcccCcceeCc
Q 006399 385 LQNHQDLQNYLKTYVKTISRKYRFWNRTGGTDHFVVACHDWAPKFT---GQHLRNCIKAL-CNAD-VSKGFKIGMDTSLP 459 (647)
Q Consensus 385 ~~~~~~L~~~l~~yv~~I~~~yPyWNRsgGrDHflv~~hdwgp~~t---~~~~~n~IraL-~nas-~~~~FRpg~DVsIP 459 (647)
..........+..++..+++++|||||++|+||||+++|+||.+.. .....+.+.++ +++. ...+|+|++||++|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~p~w~r~~G~dH~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~P 158 (302)
T PF03016_consen 79 SPNSGADRDSLSDALRHLLASYPYWNRSGGRDHFFVNSHDRGGCSFDRNPRLMNNSIRAVVAFSSFSSSCFRPGFDIVIP 158 (302)
T ss_pred CccchhhHHHHHHHHHHHHhcCchhhccCCCCeEEEeccccccccccccHhhhccchhheeccCCCCcCcccCCCCeecc
Confidence 0111222345566677777899999999999999999999776543 34555666666 3333 35789999999999
Q ss_pred ccccCCCCCcCCCCCCCCCCCCceEEEEeeccC-------CcchHHHHHHhhcCCCCeEEecCCCCCCcchhhHHHhhcc
Q 006399 460 VTYIRSAEAPLDNLGGNPPLKRSTLAFFAGRMH-------GYLRPILLNFWENKVDDMKIFGPMPHDVEGKRIYREHMKS 532 (647)
Q Consensus 460 ~~~~~~~~~pl~~l~~~~p~~R~~LafFaG~~~-------G~iR~~L~~~w~n~~~dv~I~~~c~~~~~g~~~Y~e~m~~ 532 (647)
++................+.+|++|++|+|+.. +.+|..|+..|++ .++..+.. ......+..+|.+.|++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~R~~l~~f~g~~~~~~~~~~~~~r~~l~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~l~~ 236 (302)
T PF03016_consen 159 PFVPPSSLPDWRPWPQRPPARRPYLLFFAGTIRPSSNDYSGGVRQRLLDECKS-DPDFRCSD-GSETCPSPSEYMELLRN 236 (302)
T ss_pred ccccccccCCccccccCCccCCceEEEEeeeccccccccchhhhhHHHHhccc-CCcceeee-cccccccchHHHHhccc
Confidence 976544322222223456789999999999864 3589999998864 34443321 11111235679999999
Q ss_pred ceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcCC
Q 006399 533 SKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSI 598 (647)
Q Consensus 533 SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sI 598 (647)
|||||||+|+++++.||+|||++|||||||+|++.|||+++|||++|||+|+++++++|+++|++|
T Consensus 237 S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL~~i 302 (302)
T PF03016_consen 237 SKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPELPEILRSI 302 (302)
T ss_pred CeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999986
No 3
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-35 Score=316.57 Aligned_cols=310 Identities=18% Similarity=0.313 Sum_probs=222.1
Q ss_pred cccccCCCccccchhhhh-cCCCcEEEecCCCCCCcCCcccCcchhhHHHHHHHHh---hCCccccCCCCCceEEEEecc
Q 006399 297 HASVFRNVSIFKRSYELM-ESLLKVYIYKEGEKPIFHQPIMRGIYASEGWFMKLME---GNRKFVVRDPRKAHLFYLPFS 372 (647)
Q Consensus 297 ~~~~y~~~scF~~SY~cm-~~~fKVYVYp~~~~pi~h~~~~~~iYasE~~F~~~Le---~sS~~rT~DPeEA~LFyVPfs 372 (647)
..+.++...|||+| ||. +.+|.||||+.+.... | |...+|+.+.+. .+..|.|+||+.||++++-+.
T Consensus 175 ~~~~c~lhncfdyS-RCsltSgfPVYvyd~D~~~~-------G-~~~d~~lk~~fq~t~~~n~~~ve~pd~ACiyi~lvg 245 (907)
T KOG2264|consen 175 QISPCQLHNCFDYS-RCSLTSGFPVYVYDSDIITS-------G-QSEDEWLKQVFQETIPNNVYLVETPDKACIYIHLVG 245 (907)
T ss_pred ccCcccchhccccc-cccccCCceeEEeccceeec-------c-cchHHHHHHHHHHhcccceeEeeCCCccEEEEEEec
Confidence 45678888999999 996 8899999999763221 2 223344333333 246899999999999998543
Q ss_pred chhhHHhhhhhhhhhhHHHHHHHHHHHHHHhhcCcccccCCCccEEEEeecCCCccchhHhh--hhHhhheeccc--CCC
Q 006399 373 SQMLRIALSEQKLQNHQDLQNYLKTYVKTISRKYRFWNRTGGTDHFVVACHDWAPKFTGQHL--RNCIKALCNAD--VSK 448 (647)
Q Consensus 373 ~~~l~~~ly~~~~~~~~~L~~~l~~yv~~I~~~yPyWNRsgGrDHflv~~hdwgp~~t~~~~--~n~IraL~nas--~~~ 448 (647)
. .. .+-...+..+.+ + -.+|||. ++|+||++++... ++.+..++ .++++++...+ +..
T Consensus 246 e--~q----~P~~l~p~elek--------l-yslp~w~-~dg~Nhvl~Nl~r--~s~~~n~lyn~~t~raivvQssf~~~ 307 (907)
T KOG2264|consen 246 E--IQ----SPVVLTPAELEK--------L-YSLPHWR-TDGFNHVLFNLGR--PSDTQNLLYNFQTGRAIVVQSSFYTV 307 (907)
T ss_pred c--cc----CCCcCChHhhhh--------h-hcCcccc-CCCcceEEEEccC--ccccccceeEeccCceEEEeecceee
Confidence 1 11 121222333332 1 3689998 6999999999765 22222222 56778875444 357
Q ss_pred CcccCcceeCcccccCCCCCcCCCCCCCCCCCCceEEEEeeccCCc------chHHHHHHhhcC------CCCeEEe---
Q 006399 449 GFKIGMDTSLPVTYIRSAEAPLDNLGGNPPLKRSTLAFFAGRMHGY------LRPILLNFWENK------VDDMKIF--- 513 (647)
Q Consensus 449 ~FRpg~DVsIP~~~~~~~~~pl~~l~~~~p~~R~~LafFaG~~~G~------iR~~L~~~w~n~------~~dv~I~--- 513 (647)
.||||||..+|+..+...+.-+..+....|.+|+||+.|+|++... .+....++..+. +.-+..+
T Consensus 308 q~RpgfDl~V~pv~h~~~e~~~~e~~p~vP~~RkyL~t~qgki~~~~ssLn~~~aF~~e~~adp~~~a~qds~i~qv~c~ 387 (907)
T KOG2264|consen 308 QIRPGFDLPVDPVNHIAVEKNFVELTPLVPFQRKYLITLQGKIESDNSSLNEFSAFSEELSADPSRRAVQDSPIVQVKCS 387 (907)
T ss_pred eeccCCCcccCcccccccCccceecCcccchhhheeEEEEeeecccccccchhhhhHHHhccCCcccccccCceEEEEEe
Confidence 8999999999987665555445556667789999999999976421 222222332211 1112211
Q ss_pred cCCCC---CC------cc-hhhHHHhhccceEEEE-ecCCCC-----CCchHHHHhhcCcEEEEecCCccCCCCCCCCCC
Q 006399 514 GPMPH---DV------EG-KRIYREHMKSSKYCIC-ARGYEV-----HTPRVVEAIFYECVPVIISDNYVPPFFEVLNWE 577 (647)
Q Consensus 514 ~~c~~---~~------~g-~~~Y~e~m~~SkFCL~-P~G~~~-----~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs 577 (647)
-.|.+ +. || ..+..++++.|||||+ |+|++- .-.|++||++.||||||+++...|||.|.|||.
T Consensus 388 ~t~k~Qe~~SLpewalcg~~~~RrqLlk~STF~lilpp~d~rv~S~~~~~r~~eaL~~GavPviLg~~~~LPyqd~idWr 467 (907)
T KOG2264|consen 388 FTCKNQENCSLPEWALCGERERRRQLLKSSTFCLILPPGDPRVISEMFFQRFLEALQLGAVPVILGNSQLLPYQDLIDWR 467 (907)
T ss_pred eccccCCCCCcchhhhccchHHHHHHhccceeEEEecCCCcchhhHHHHHHHHHHHhcCCeeEEeccccccchHHHHHHH
Confidence 12322 11 34 3467899999999997 788753 247999999999999999999999999999999
Q ss_pred ceEEEEcCCChhhHHHHHcCCCHHHHHHHHHHHHhhhheeEeccCCCCcc-HHHHHHHHHHH
Q 006399 578 AFSVFVQEKDIPNLRNILLSIPEERYLAMQSRVKMVQKHFLWHKKPKKYD-IFHMVLHSIWY 638 (647)
Q Consensus 578 ~fSV~Ipe~dI~~L~~iL~sIs~e~i~~Mr~~l~~vq~~Flw~~~p~~~D-aFhmiL~slwl 638 (647)
+.++++|..++++++.+|+++.+.++++||+ |++|+|++|...-+ .++++|.+|-.
T Consensus 468 raal~lPkaR~tE~HFllrs~~dsDll~mRR-----qGRl~wEtYls~~~~~~~tvlA~lR~ 524 (907)
T KOG2264|consen 468 RAALRLPKARLTEAHFLLRSFEDSDLLEMRR-----QGRLFWETYLSDRHLLARTVLAALRY 524 (907)
T ss_pred HHhhhCCccccchHHHHHHhcchhhHHHHHh-----hhhhhHHHHhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 89999999987665 67788888743
No 4
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=99.91 E-value=4e-24 Score=231.80 Aligned_cols=305 Identities=19% Similarity=0.145 Sum_probs=211.8
Q ss_pred CCCccccccCCCccccchhhhhcCCCcEEEecCCCCCCcCCcccCcchhhHHHHHHHHhh--CCccccCCCCCceEEEEe
Q 006399 293 TPELHASVFRNVSIFKRSYELMESLLKVYIYKEGEKPIFHQPIMRGIYASEGWFMKLMEG--NRKFVVRDPRKAHLFYLP 370 (647)
Q Consensus 293 ~~~~~~~~y~~~scF~~SY~cm~~~fKVYVYp~~~~pi~h~~~~~~iYasE~~F~~~Le~--sS~~rT~DPeEA~LFyVP 370 (647)
.++..-+-++-++||+. |+|--...|||+|+.++----.+-....-++.|+ ++.+++ .|.|+|.|+++||+|..
T Consensus 75 ~~e~g~~sc~~~dcf~~-y~c~~~~~KvyIy~l~~~vd~~s~~~~~T~s~ey--~~lleA~~~S~yyt~n~N~aclf~P- 150 (691)
T KOG1022|consen 75 ASETGLPSCFLADCFLY-YQCLFFETKVYIYMLGDIVDAKSIDKGATWSPEY--IALLEAWHLSFYYTFNYNGACLFMP- 150 (691)
T ss_pred ccccCCccceehhhhhh-hhccccccceeEEehhhhhhhhcccccccccHHH--HHHHHHHHhccceecCCCceEEEec-
Confidence 33333455667788998 7998889999999987421000101112233443 334442 37999999999999985
Q ss_pred ccchhhHHhhhhhhhhhhHHHHHHHHHHHHHHhhcCcccccCCCccEEEEeecCCC-ccchhHhhhhHhhheeccc-C-C
Q 006399 371 FSSQMLRIALSEQKLQNHQDLQNYLKTYVKTISRKYRFWNRTGGTDHFVVACHDWA-PKFTGQHLRNCIKALCNAD-V-S 447 (647)
Q Consensus 371 fs~~~l~~~ly~~~~~~~~~L~~~l~~yv~~I~~~yPyWNRsgGrDHflv~~hdwg-p~~t~~~~~n~IraL~nas-~-~ 447 (647)
+++.+. ++..+ ..+ -..+.+++-.|.| |.||..|+.-+.| |.+...+..+.-.|+.... + +
T Consensus 151 -s~d~ln-----Qn~l~-----~kl---~~~ala~l~~wdr--g~nH~~fnmLpGg~p~yntaldv~~d~a~~~gggf~t 214 (691)
T KOG1022|consen 151 -SSDELN-----QNPLS-----WKL---EKVALAKLLVWDR--GVNHEGFNMLPGGDPTYNTALDVGQDEAWYSGGGFGT 214 (691)
T ss_pred -chhhhc-----cCcch-----HHH---HHHHHhcccchhc--ccceeeEeeccCCCCCccccccCCcceeEEecCCcCc
Confidence 444442 33221 222 2334467889998 9999999988876 4444333333333333222 2 4
Q ss_pred CCcccCcceeCcccccCCCCCcCCCCCCCCCCCCceEEEEeec-cCCcchHHHHHHhhcCCCCeEEecCCCCCC------
Q 006399 448 KGFKIGMDTSLPVTYIRSAEAPLDNLGGNPPLKRSTLAFFAGR-MHGYLRPILLNFWENKVDDMKIFGPMPHDV------ 520 (647)
Q Consensus 448 ~~FRpg~DVsIP~~~~~~~~~pl~~l~~~~p~~R~~LafFaG~-~~G~iR~~L~~~w~n~~~dv~I~~~c~~~~------ 520 (647)
+.||+|+||+||...+.... +...-+.+|.+++--.|- .+..+|..|.+..-+.+....+++.|-+-.
T Consensus 215 W~yr~g~dv~ipv~Sp~~v~-----~~~~~~g~r~~~l~~~q~n~~pr~r~~l~el~~kh~e~~l~l~~c~nlsl~~r~~ 289 (691)
T KOG1022|consen 215 WKYRKGNDVYIPVRSPGNVG-----RAFLYDGSRYRVLQDCQENYGPRIRVSLIELLSKHEERELELPFCLNLSLNSRGV 289 (691)
T ss_pred ccccCCCccccccccccccC-----ccccCCccceeeeeccccccchHhHHhHHHHHhhccceEEecchhccccccccch
Confidence 67999999999998654322 222345677776666553 344688887766544445556666563311
Q ss_pred ---cchhhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcC
Q 006399 521 ---EGKRIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLS 597 (647)
Q Consensus 521 ---~g~~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~s 597 (647)
+-.-.|.+.+...+||+.-+|.+.+.+-+++-+++||+|||+.|.|.+||++|+||...||+++|..+..+..+|++
T Consensus 290 ~qhH~~~~yp~~l~~~~fc~~~R~~r~gq~~lv~~~~a~c~pvi~vd~y~lpf~~Vvdw~~aSv~~~e~~~~~v~~~l~~ 369 (691)
T KOG1022|consen 290 RQHHFDVKYPSSLEFIGFCDGDRVTRGGQFHLVILGYASCAPVISVDIYLLPFLGVVDWIVASVWCMEYYAGKVMDALLN 369 (691)
T ss_pred hhcccccccccccceeeeEeccccccCCccceehhhhcccceeeeeehhhhhhhhhhhceeeeEEeehhhHHHHHHHhhc
Confidence 11356999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhhheeEeccCCCCcc
Q 006399 598 IPEERYLAMQSRVKMVQKHFLWHKKPKKYD 627 (647)
Q Consensus 598 Is~e~i~~Mr~~l~~vq~~Flw~~~p~~~D 627 (647)
|+...+-+||.+ +.-.|-.+....-
T Consensus 370 i~~~~i~sl~~r-----~~~~rl~rf~~~~ 394 (691)
T KOG1022|consen 370 IETAGICSLQLR-----RIGSRLNRFPPFK 394 (691)
T ss_pred chhcchhhhhhh-----hhhhhHhhcchHH
Confidence 999999999984 4444555555443
No 5
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 10 GT10 from CAZY comprises enzymes with two known activities; galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) and galactoside 3-fucosyltransferase (2.4.1.152 from EC). The galactoside 3-fucosyltransferases display similarities with the alpha-2 and alpha-6-fucosyltranferases []. The biosynthesis of the carbohydrate antigen sialyl Lewis X (sLe(x)) is dependent on the activity of an galactoside 3-fucosyltransferase. This enzyme catalyses the transfer of fucose from GDP-beta-fucose to the 3-OH of N-acetylglucosamine present in lactosamine acceptors []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) belongs to the Lewis blood group system and is associated with Le(a/b) antigen. ; GO: 0008417 fucosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 2NZX_B 2NZW_C 2NZY_C.
Probab=97.20 E-value=0.00076 Score=73.12 Aligned_cols=152 Identities=16% Similarity=0.206 Sum_probs=71.8
Q ss_pred CCcccCcceeCcccccCCCCCcCC--CCCCCCCCCCceEEEEeeccCC-cchHHHHHHhhcCCCCeEEecCCC-CCCcch
Q 006399 448 KGFKIGMDTSLPVTYIRSAEAPLD--NLGGNPPLKRSTLAFFAGRMHG-YLRPILLNFWENKVDDMKIFGPMP-HDVEGK 523 (647)
Q Consensus 448 ~~FRpg~DVsIP~~~~~~~~~pl~--~l~~~~p~~R~~LafFaG~~~G-~iR~~L~~~w~n~~~dv~I~~~c~-~~~~g~ 523 (647)
-+||..-||.+|+........... .+......+++..++++....+ ..|..+.+.+... -.|..+|.|. ......
T Consensus 140 MTYr~dSDi~~py~~~~~~~~~~~~~~~~~~~~~K~~~~~w~~Snc~~~~~R~~~~~~L~~~-~~vd~yG~c~~~~~~~~ 218 (349)
T PF00852_consen 140 MTYRRDSDIPLPYGYFSPRESPSEKDDLPNILKKKTKLAAWIVSNCNPHSGREEYVRELSKY-IPVDSYGKCGNNNPCPR 218 (349)
T ss_dssp ---------------------------------TSSEEEEE--S-S--H-HHHHHHHHHHTT-S-EEE-SSTT--SSS--
T ss_pred cccccccccccccccccccccccccccccccccCCCceEEEEeeCcCCcccHHHHHHHHHhh-cCeEccCCCCCCCCccc
Confidence 468888999999854322211111 1111122333455666666543 2477777777544 5688899993 322234
Q ss_pred hhHHHhhccceEEEEec---CCCCCCchHHHHhhcCcEEEEec--C-Cc--cCCCCCCCCCCceEEEEcCCChhhHHHHH
Q 006399 524 RIYREHMKSSKYCICAR---GYEVHTPRVVEAIFYECVPVIIS--D-NY--VPPFFEVLNWEAFSVFVQEKDIPNLRNIL 595 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~---G~~~~S~Rl~EAL~aGCIPVIIs--D-~~--~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL 595 (647)
..+.+.+++-+|.|+.- ....-+--|++|+.+|||||+++ . ++ .+|=...|+.++|. .+.+|.+.|
T Consensus 219 ~~~~~~~~~ykF~lafENs~c~dYiTEK~~~al~~g~VPI~~G~~~~~~~~~~P~~SfI~~~df~------s~~~La~yl 292 (349)
T PF00852_consen 219 DCKLELLSKYKFYLAFENSNCPDYITEKFWNALLAGTVPIYWGPPRPNYEEFAPPNSFIHVDDFK------SPKELADYL 292 (349)
T ss_dssp S-HHHHHHTEEEEEEE-SS--TT---HHHHHHHHTTSEEEEES---TTHHHHS-GGGSEEGGGSS------SHHHHHHHH
T ss_pred ccccccccCcEEEEEecCCCCCCCCCHHHHHHHHCCeEEEEECCEecccccCCCCCCccchhcCC------CHHHHHHHH
Confidence 45899999999999863 22335789999999999999999 3 23 25547778777763 566788888
Q ss_pred cCCC--HHHHHHH
Q 006399 596 LSIP--EERYLAM 606 (647)
Q Consensus 596 ~sIs--~e~i~~M 606 (647)
+.+. ++.|.+.
T Consensus 293 ~~l~~n~~~Y~~y 305 (349)
T PF00852_consen 293 KYLDKNDELYNKY 305 (349)
T ss_dssp HHHHT-HHHHH--
T ss_pred HHHhcCHHHHhhh
Confidence 7773 5555543
No 6
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=97.18 E-value=0.0024 Score=63.86 Aligned_cols=95 Identities=19% Similarity=0.205 Sum_probs=73.6
Q ss_pred hhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcCC--CHH
Q 006399 524 RIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSI--PEE 601 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sI--s~e 601 (647)
.++.+.|..|.+.++|.-.+..+..++||+.+|| |||.++. -.+.+.+......+.++..+..++.+.|..+ .++
T Consensus 267 ~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~-pvI~~~~--~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~ 343 (374)
T cd03801 267 EDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGL-PVVASDV--GGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDPE 343 (374)
T ss_pred hhHHHHHHhcCEEEecchhccccchHHHHHHcCC-cEEEeCC--CChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcChH
Confidence 5688999999999999877667788999999998 6777765 4456677767888888888887777777664 466
Q ss_pred HHHHHHHHHH-hhhheeEecc
Q 006399 602 RYLAMQSRVK-MVQKHFLWHK 621 (647)
Q Consensus 602 ~i~~Mr~~l~-~vq~~Flw~~ 621 (647)
...+|.++.+ .+.+.|-|+.
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~ 364 (374)
T cd03801 344 LRRRLGEAARERVAERFSWDR 364 (374)
T ss_pred HHHHHHHHHHHHHHHhcCHHH
Confidence 7778888766 5677777764
No 7
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.08 E-value=0.0027 Score=64.84 Aligned_cols=94 Identities=16% Similarity=0.152 Sum_probs=70.8
Q ss_pred hhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcCC--CHH
Q 006399 524 RIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSI--PEE 601 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sI--s~e 601 (647)
.+..+.|..|.+|++|.+.+..+..++|||++|| |||.++.- .+.+++.=....+.++..+..++.+.+..+ .++
T Consensus 258 ~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~-PvI~~~~~--~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~ 334 (364)
T cd03814 258 EELAAAYASADVFVFPSRTETFGLVVLEAMASGL-PVVAPDAG--GPADIVTDGENGLLVEPGDAEAFAAALAALLADPE 334 (364)
T ss_pred HHHHHHHHhCCEEEECcccccCCcHHHHHHHcCC-CEEEcCCC--CchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCHH
Confidence 4577899999999999988777889999999999 78888744 244555445667777887776555555554 477
Q ss_pred HHHHHHHHHHhhhheeEec
Q 006399 602 RYLAMQSRVKMVQKHFLWH 620 (647)
Q Consensus 602 ~i~~Mr~~l~~vq~~Flw~ 620 (647)
.+.+|.++..+...+|-|+
T Consensus 335 ~~~~~~~~~~~~~~~~~~~ 353 (364)
T cd03814 335 LRRRMAARARAEAERRSWE 353 (364)
T ss_pred HHHHHHHHHHHHHhhcCHH
Confidence 8888888877766666665
No 8
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=96.81 E-value=0.008 Score=61.14 Aligned_cols=95 Identities=15% Similarity=0.112 Sum_probs=67.9
Q ss_pred hhHHHhhccceEEEEecCCCCC-----CchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcCC
Q 006399 524 RIYREHMKSSKYCICARGYEVH-----TPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSI 598 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~~~~-----S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sI 598 (647)
.++.+.|..+.++++|...+.. ...++||+.+|| |||.++.-.. .+.+.=....+.++..++.++.+.|..+
T Consensus 286 ~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~-pvi~~~~~~~--~~~~~~~~~g~~~~~~~~~~l~~~i~~~ 362 (394)
T cd03794 286 EELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGK-PVLASVDGES--AELVEEAGAGLVVPPGDPEALAAAILEL 362 (394)
T ss_pred HHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCC-cEEEecCCCc--hhhhccCCcceEeCCCCHHHHHHHHHHH
Confidence 4678899999999999876543 456899999997 8888775432 2233222566777877888777777666
Q ss_pred --CHHHHHHHHHHHHhh-hheeEecc
Q 006399 599 --PEERYLAMQSRVKMV-QKHFLWHK 621 (647)
Q Consensus 599 --s~e~i~~Mr~~l~~v-q~~Flw~~ 621 (647)
.++++.+|.++..+. +++|-|+.
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~s~~~ 388 (394)
T cd03794 363 LDDPEERAEMGENGRRYVEEKFSREK 388 (394)
T ss_pred HhChHHHHHHHHHHHHHHHHhhcHHH
Confidence 678888888876654 44777764
No 9
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=96.80 E-value=0.0046 Score=68.66 Aligned_cols=113 Identities=13% Similarity=0.180 Sum_probs=82.9
Q ss_pred hhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCC---CceEEEEcCCChhhHHHHHcCC--
Q 006399 524 RIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNW---EAFSVFVQEKDIPNLRNILLSI-- 598 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDW---s~fSV~Ipe~dI~~L~~iL~sI-- 598 (647)
.+..+.|+.+..+++|...+..+.-++|||.+| +|||.++.- ...++++= ....+.++..+...+.+.|..+
T Consensus 323 ~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G-~PVI~s~~g--g~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~ 399 (465)
T PLN02871 323 DELSQAYASGDVFVMPSESETLGFVVLEAMASG-VPVVAARAG--GIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLA 399 (465)
T ss_pred HHHHHHHHHCCEEEECCcccccCcHHHHHHHcC-CCEEEcCCC--CcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHh
Confidence 468899999999999998887788899999999 899998753 33455543 7788888888888777666554
Q ss_pred CHHHHHHHHHHHHhhhheeEeccCCCCc-c-HHHHHHHHHHHhh
Q 006399 599 PEERYLAMQSRVKMVQKHFLWHKKPKKY-D-IFHMVLHSIWYNR 640 (647)
Q Consensus 599 s~e~i~~Mr~~l~~vq~~Flw~~~p~~~-D-aFhmiL~slwlRR 640 (647)
.++...+|.++.++....|-|..-..+. + ++..++. -|.+|
T Consensus 400 ~~~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~-~~~~~ 442 (465)
T PLN02871 400 DPELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIW-FWRKK 442 (465)
T ss_pred CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 4677788888887766778888665544 3 2333333 35555
No 10
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=96.79 E-value=0.0066 Score=61.64 Aligned_cols=93 Identities=18% Similarity=0.290 Sum_probs=63.6
Q ss_pred hhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcCC--CHH
Q 006399 524 RIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSI--PEE 601 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sI--s~e 601 (647)
.+..+.|..+.++++|.-.+..+..++|||++|| |||.++.. +..+++.- ...+.++.. ..++.+.+..+ .++
T Consensus 273 ~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~--~~~~~~~~-~~~~~~~~~-~~~~~~~i~~l~~~~~ 347 (375)
T cd03821 273 EDKAAALADADLFVLPSHSENFGIVVAEALACGT-PVVTTDKV--PWQELIEY-GCGWVVDDD-VDALAAALRRALELPQ 347 (375)
T ss_pred HHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCC-CEEEcCCC--CHHHHhhc-CceEEeCCC-hHHHHHHHHHHHhCHH
Confidence 3677889999999999877777788999999997 88887743 23344432 444555443 35444444433 246
Q ss_pred HHHHHHHHHHhh-hheeEecc
Q 006399 602 RYLAMQSRVKMV-QKHFLWHK 621 (647)
Q Consensus 602 ~i~~Mr~~l~~v-q~~Flw~~ 621 (647)
...+|.++.++. +++|-|+.
T Consensus 348 ~~~~~~~~~~~~~~~~~s~~~ 368 (375)
T cd03821 348 RLKAMGENGRALVEERFSWTA 368 (375)
T ss_pred HHHHHHHHHHHHHHHhcCHHH
Confidence 788888877765 78887764
No 11
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=96.67 E-value=0.0042 Score=58.39 Aligned_cols=94 Identities=22% Similarity=0.271 Sum_probs=63.0
Q ss_pred CCeEEecCCCCCCcchhhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCC
Q 006399 508 DDMKIFGPMPHDVEGKRIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKD 587 (647)
Q Consensus 508 ~dv~I~~~c~~~~~g~~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~d 587 (647)
..+.+++..+ ..++.+.++.|.+.++|..++..+..++|||.+|| |||+++. -.+.+++.=..-.+.++..+
T Consensus 73 ~~i~~~~~~~-----~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~-pvI~~~~--~~~~e~~~~~~~g~~~~~~~ 144 (172)
T PF00534_consen 73 ENIIFLGYVP-----DDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGC-PVIASDI--GGNNEIINDGVNGFLFDPND 144 (172)
T ss_dssp TTEEEEESHS-----HHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT--EEEEESS--THHHHHSGTTTSEEEESTTS
T ss_pred cccccccccc-----ccccccccccceecccccccccccccccccccccc-ceeeccc--cCCceeeccccceEEeCCCC
Confidence 3555555432 34688999999999999999888999999999999 6667773 33344443333556777778
Q ss_pred hhhHHHHHcCCCH--HHHHHHHHH
Q 006399 588 IPNLRNILLSIPE--ERYLAMQSR 609 (647)
Q Consensus 588 I~~L~~iL~sIs~--e~i~~Mr~~ 609 (647)
+.++.+.+..+-. +....|.++
T Consensus 145 ~~~l~~~i~~~l~~~~~~~~l~~~ 168 (172)
T PF00534_consen 145 IEELADAIEKLLNDPELRQKLGKN 168 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHH
Confidence 8888777776643 445555554
No 12
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=96.60 E-value=0.012 Score=60.33 Aligned_cols=95 Identities=17% Similarity=0.178 Sum_probs=70.7
Q ss_pred hhHHHhhccceEEEEecCCC--CCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcCC--C
Q 006399 524 RIYREHMKSSKYCICARGYE--VHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSI--P 599 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~~--~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sI--s 599 (647)
.+..+.|+.+.+++.|..++ ..+..++||+++|| |||.+|.-- .+++.+ ....+.++..+..++.+.|..+ .
T Consensus 259 ~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~-PvI~~~~~~--~~~i~~-~~~g~~~~~~d~~~~~~~l~~l~~~ 334 (366)
T cd03822 259 EELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGK-PVISTPVGH--AEEVLD-GGTGLLVPPGDPAALAEAIRRLLAD 334 (366)
T ss_pred HHHHHHHhhcCEEEecccccccccchHHHHHHHcCC-CEEecCCCC--hheeee-CCCcEEEcCCCHHHHHHHHHHHHcC
Confidence 46789999999999998887 77788999999999 999887533 333334 3446677777777766666554 3
Q ss_pred HHHHHHHHHHHHhhhheeEeccC
Q 006399 600 EERYLAMQSRVKMVQKHFLWHKK 622 (647)
Q Consensus 600 ~e~i~~Mr~~l~~vq~~Flw~~~ 622 (647)
++...+|+++.++..+.|.|+..
T Consensus 335 ~~~~~~~~~~~~~~~~~~s~~~~ 357 (366)
T cd03822 335 PELAQALRARAREYARAMSWERV 357 (366)
T ss_pred hHHHHHHHHHHHHHHhhCCHHHH
Confidence 46788899888876666777643
No 13
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=96.56 E-value=0.016 Score=60.59 Aligned_cols=95 Identities=18% Similarity=0.141 Sum_probs=68.4
Q ss_pred hhHHHhhccceEEEEecCC------CCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcC
Q 006399 524 RIYREHMKSSKYCICARGY------EVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLS 597 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~------~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~s 597 (647)
.+..+.|..|..+++|.-. +.....++|||++|| |||.+|.-. ..+++.=....+.++..+..++.+.|..
T Consensus 256 ~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~-PvI~s~~~~--~~e~i~~~~~g~~~~~~d~~~l~~~i~~ 332 (367)
T cd05844 256 AEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGV-PVVATRHGG--IPEAVEDGETGLLVPEGDVAALAAALGR 332 (367)
T ss_pred HHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCC-CEEEeCCCC--chhheecCCeeEEECCCCHHHHHHHHHH
Confidence 4567889999998888532 234578999999997 999888643 3455555667788888888777666655
Q ss_pred C--CHHHHHHHHHHHHh-hhheeEecc
Q 006399 598 I--PEERYLAMQSRVKM-VQKHFLWHK 621 (647)
Q Consensus 598 I--s~e~i~~Mr~~l~~-vq~~Flw~~ 621 (647)
+ .++...+|.++.++ ++++|-|+.
T Consensus 333 l~~~~~~~~~~~~~a~~~~~~~~s~~~ 359 (367)
T cd05844 333 LLADPDLRARMGAAGRRRVEERFDLRR 359 (367)
T ss_pred HHcCHHHHHHHHHHHHHHHHHHCCHHH
Confidence 4 45667778776654 567788874
No 14
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=96.43 E-value=0.0061 Score=61.00 Aligned_cols=96 Identities=18% Similarity=0.188 Sum_probs=71.4
Q ss_pred hhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcCC--CHH
Q 006399 524 RIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSI--PEE 601 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sI--s~e 601 (647)
.+..+.|+++.+++.|...+.....++|||++||.+ |.++....+ +++++-....+.++..++.++.+.+..+ .++
T Consensus 244 ~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~Pv-i~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~~ 321 (348)
T cd03820 244 KNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLPV-ISFDCPTGP-SEIIEDGVNGLLVPNGDVEALAEALLRLMEDEE 321 (348)
T ss_pred chHHHHHHhCCEEEeCccccccCHHHHHHHHcCCCE-EEecCCCch-HhhhccCcceEEeCCCCHHHHHHHHHHHHcCHH
Confidence 457789999999999987776678899999999965 455533222 2344544577788888877777666665 578
Q ss_pred HHHHHHHHHHhhhheeEecc
Q 006399 602 RYLAMQSRVKMVQKHFLWHK 621 (647)
Q Consensus 602 ~i~~Mr~~l~~vq~~Flw~~ 621 (647)
...+|.++.+++.+.|-|+.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~ 341 (348)
T cd03820 322 LRKRMGANARESAERFSIEN 341 (348)
T ss_pred HHHHHHHHHHHHHHHhCHHH
Confidence 88889998888888877764
No 15
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=96.35 E-value=0.021 Score=61.63 Aligned_cols=106 Identities=18% Similarity=0.181 Sum_probs=76.5
Q ss_pred CCeEEecCCCCCCcchhhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCC
Q 006399 508 DDMKIFGPMPHDVEGKRIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKD 587 (647)
Q Consensus 508 ~dv~I~~~c~~~~~g~~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~d 587 (647)
+.+.+.|..+ ..++.+.|..|..++.|.-.+..+.-++|||++|| |||.+|. -+..+++.-..-.+.++..+
T Consensus 281 ~~V~f~G~v~-----~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~-PVIas~~--~g~~e~i~~~~~G~lv~~~d 352 (396)
T cd03818 281 SRVHFLGRVP-----YDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGC-LVVGSDT--APVREVITDGENGLLVDFFD 352 (396)
T ss_pred ceEEEeCCCC-----HHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCC-CEEEcCC--CCchhhcccCCceEEcCCCC
Confidence 4566666654 24678899999999998766555667999999999 8888875 35667777667788888888
Q ss_pred hhhHHHHHcCC--CHHHHHHHHHHHHh-hhheeEecc
Q 006399 588 IPNLRNILLSI--PEERYLAMQSRVKM-VQKHFLWHK 621 (647)
Q Consensus 588 I~~L~~iL~sI--s~e~i~~Mr~~l~~-vq~~Flw~~ 621 (647)
...+.+.+..+ .++...+|.++.++ +.++|-|+.
T Consensus 353 ~~~la~~i~~ll~~~~~~~~l~~~ar~~~~~~fs~~~ 389 (396)
T cd03818 353 PDALAAAVIELLDDPARRARLRRAARRTALRYDLLSV 389 (396)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhccHHH
Confidence 77666555443 35677788777664 556677764
No 16
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=96.34 E-value=0.021 Score=61.35 Aligned_cols=107 Identities=12% Similarity=0.114 Sum_probs=74.8
Q ss_pred CeEEecCCCCCCcchhhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCCh
Q 006399 509 DMKIFGPMPHDVEGKRIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDI 588 (647)
Q Consensus 509 dv~I~~~c~~~~~g~~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI 588 (647)
.+.+.|.++ ..+..+.|+.+..|+.|.=.+....-++|||++|| |||.++.-- ..+++.=....+.++..+.
T Consensus 284 ~v~~~g~~~-----~~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~-Pvi~~~~~~--~~e~i~~~~~g~~~~~~d~ 355 (405)
T TIGR03449 284 RVRFLPPRP-----PEELVHVYRAADVVAVPSYNESFGLVAMEAQACGT-PVVAARVGG--LPVAVADGETGLLVDGHDP 355 (405)
T ss_pred eEEECCCCC-----HHHHHHHHHhCCEEEECCCCCCcChHHHHHHHcCC-CEEEecCCC--cHhhhccCCceEECCCCCH
Confidence 455555443 24677899999999999766656678999999997 888887532 3355544456677888887
Q ss_pred hhHHHHHcCC--CHHHHHHHHHHHHhhhheeEeccCC
Q 006399 589 PNLRNILLSI--PEERYLAMQSRVKMVQKHFLWHKKP 623 (647)
Q Consensus 589 ~~L~~iL~sI--s~e~i~~Mr~~l~~vq~~Flw~~~p 623 (647)
..+.+.|..+ .++...+|+++.++..++|-|+.-.
T Consensus 356 ~~la~~i~~~l~~~~~~~~~~~~~~~~~~~fsw~~~~ 392 (405)
T TIGR03449 356 ADWADALARLLDDPRTRIRMGAAAVEHAAGFSWAATA 392 (405)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 7665555443 4667788888877766778887543
No 17
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=96.32 E-value=0.015 Score=59.63 Aligned_cols=93 Identities=19% Similarity=0.206 Sum_probs=69.9
Q ss_pred hhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcC-C-CHH
Q 006399 524 RIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLS-I-PEE 601 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~s-I-s~e 601 (647)
.+..+.|..+.+++.|.-.+..+.-++||+++|| |||.++.- .+.+++ ....+.++..+..++.+.|.. + .++
T Consensus 264 ~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~-pvI~~~~~--~~~e~~--~~~~~~~~~~~~~~~~~~i~~l~~~~~ 338 (365)
T cd03809 264 EELAALYRGARAFVFPSLYEGFGLPVLEAMACGT-PVIASNIS--SLPEVA--GDAALYFDPLDPEALAAAIERLLEDPA 338 (365)
T ss_pred hHHHHHHhhhhhhcccchhccCCCCHHHHhcCCC-cEEecCCC--Ccccee--cCceeeeCCCCHHHHHHHHHHHhcCHH
Confidence 4678889999999999766555677999999997 77777642 234444 356677788888877777766 3 477
Q ss_pred HHHHHHHHHHhhhheeEecc
Q 006399 602 RYLAMQSRVKMVQKHFLWHK 621 (647)
Q Consensus 602 ~i~~Mr~~l~~vq~~Flw~~ 621 (647)
...+|.++.+++..+|-|+.
T Consensus 339 ~~~~~~~~~~~~~~~~sw~~ 358 (365)
T cd03809 339 LREELRERGLARAKRFSWEK 358 (365)
T ss_pred HHHHHHHHHHHHHHhCCHHH
Confidence 77888888888788888874
No 18
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.31 E-value=0.026 Score=59.01 Aligned_cols=94 Identities=17% Similarity=0.192 Sum_probs=71.0
Q ss_pred hHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcCC--CHHH
Q 006399 525 IYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSI--PEER 602 (647)
Q Consensus 525 ~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sI--s~e~ 602 (647)
+..+.|..+..|++|.-.+....-++|||.+| +|||.++.- ...+++.-..-...++..+..++.+.+..+ .++.
T Consensus 263 ~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g-~PvI~s~~~--~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~~~ 339 (371)
T cd04962 263 HVEELLSIADLFLLPSEKESFGLAALEAMACG-VPVVASNAG--GIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDDEL 339 (371)
T ss_pred cHHHHHHhcCEEEeCCCcCCCccHHHHHHHcC-CCEEEeCCC--CchhhhcCCCceEEcCCCCHHHHHHHHHHHHhCHHH
Confidence 46788999999999986666678899999999 688888754 345666655556677887877766655544 5778
Q ss_pred HHHHHHHHHhh-hheeEecc
Q 006399 603 YLAMQSRVKMV-QKHFLWHK 621 (647)
Q Consensus 603 i~~Mr~~l~~v-q~~Flw~~ 621 (647)
+.+|+++.++. ..+|-|+.
T Consensus 340 ~~~~~~~~~~~~~~~fs~~~ 359 (371)
T cd04962 340 WQEFSRAARNRAAERFDSER 359 (371)
T ss_pred HHHHHHHHHHHHHHhCCHHH
Confidence 88999887765 67777763
No 19
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=96.31 E-value=0.027 Score=58.22 Aligned_cols=94 Identities=21% Similarity=0.156 Sum_probs=70.7
Q ss_pred hhHHHhhccceEEEEec-CCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHc-C--CC
Q 006399 524 RIYREHMKSSKYCICAR-GYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILL-S--IP 599 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~-G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~-s--Is 599 (647)
.+..+.|+.|..+++|. -.+....-++|||++|| |||.+|. -+..+++.-....+.++..+...+.+.|. . ..
T Consensus 255 ~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~-PvI~~~~--~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~ 331 (355)
T cd03819 255 SDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGR-PVIASDH--GGARETVRPGETGLLVPPGDAEALAQALDQILSLL 331 (355)
T ss_pred ccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCC-CEEEcCC--CCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhC
Confidence 45788999999999997 44545678999999999 8888773 45567777666778888888888777763 2 36
Q ss_pred HHHHHHHHHHHHh-hhheeEec
Q 006399 600 EERYLAMQSRVKM-VQKHFLWH 620 (647)
Q Consensus 600 ~e~i~~Mr~~l~~-vq~~Flw~ 620 (647)
+++..+|+++.++ +..+|.|+
T Consensus 332 ~~~~~~~~~~a~~~~~~~f~~~ 353 (355)
T cd03819 332 PEGRAKMFAKARMCVETLFSYD 353 (355)
T ss_pred HHHHHHHHHHHHHHHHHhhhhc
Confidence 7888888887664 55667665
No 20
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=96.07 E-value=0.035 Score=58.83 Aligned_cols=96 Identities=15% Similarity=0.049 Sum_probs=70.7
Q ss_pred hhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcCC--CHH
Q 006399 524 RIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSI--PEE 601 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sI--s~e 601 (647)
.+..+.|+.|.++++|.-++....-++|||.+|| |||.+|.- ...+++.-......++..+..++.+.|..+ .++
T Consensus 264 ~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~-Pvv~s~~~--g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~ 340 (374)
T TIGR03088 264 DDVPALMQALDLFVLPSLAEGISNTILEAMASGL-PVIATAVG--GNPELVQHGVTGALVPPGDAVALARALQPYVSDPA 340 (374)
T ss_pred CCHHHHHHhcCEEEeccccccCchHHHHHHHcCC-CEEEcCCC--CcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhCHH
Confidence 3577889999999999766666788999999996 99998853 345667666778888888887776666554 355
Q ss_pred HHHHHHHHHHh-hhheeEeccC
Q 006399 602 RYLAMQSRVKM-VQKHFLWHKK 622 (647)
Q Consensus 602 ~i~~Mr~~l~~-vq~~Flw~~~ 622 (647)
...+|.++.++ +..+|-|+.-
T Consensus 341 ~~~~~~~~a~~~~~~~fs~~~~ 362 (374)
T TIGR03088 341 ARRAHGAAGRARAEQQFSINAM 362 (374)
T ss_pred HHHHHHHHHHHHHHHhCCHHHH
Confidence 66667666544 4567777753
No 21
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=95.98 E-value=0.039 Score=60.62 Aligned_cols=105 Identities=15% Similarity=0.136 Sum_probs=73.9
Q ss_pred CeEEecCCCCCCcchhhHHHhhccceEEEEecCC------CCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEE
Q 006399 509 DMKIFGPMPHDVEGKRIYREHMKSSKYCICARGY------EVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVF 582 (647)
Q Consensus 509 dv~I~~~c~~~~~g~~~Y~e~m~~SkFCL~P~G~------~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~ 582 (647)
.+.+.|.++ ..+..+.|+.+..+++|.=. +....-++|||.+|| |||.++.--. .|++.=..-.+.
T Consensus 280 ~V~~~G~~~-----~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~-PVI~t~~~g~--~E~v~~~~~G~l 351 (406)
T PRK15427 280 VVEMPGFKP-----SHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGI-PVVSTLHSGI--PELVEADKSGWL 351 (406)
T ss_pred eEEEeCCCC-----HHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCC-CEEEeCCCCc--hhhhcCCCceEE
Confidence 344555443 24678899999999998521 223466999999996 9998875333 356655666778
Q ss_pred EcCCChhhHHHHHcCC---CHHHHHHHHHHHHh-hhheeEecc
Q 006399 583 VQEKDIPNLRNILLSI---PEERYLAMQSRVKM-VQKHFLWHK 621 (647)
Q Consensus 583 Ipe~dI~~L~~iL~sI---s~e~i~~Mr~~l~~-vq~~Flw~~ 621 (647)
++..+...+.+.|..+ .+++..+|.++.++ +..+|-|+.
T Consensus 352 v~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~~~ 394 (406)
T PRK15427 352 VPENDAQALAQRLAAFSQLDTDELAPVVKRAREKVETDFNQQV 394 (406)
T ss_pred eCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCHHH
Confidence 8998988777766654 66778888887764 667777763
No 22
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=95.84 E-value=0.03 Score=56.40 Aligned_cols=95 Identities=15% Similarity=0.146 Sum_probs=65.0
Q ss_pred hhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcCC-CHHH
Q 006399 524 RIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSI-PEER 602 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sI-s~e~ 602 (647)
.+..+.+.+|.++++|...+..+..++||+.+|| |||.++.- ...+++.-....+.+...+..++.+.|..+ .+.+
T Consensus 270 ~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~-pvI~~~~~--~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~ 346 (377)
T cd03798 270 EEVPAYYAAADVFVLPSLREGFGLVLLEAMACGL-PVVATDVG--GIPEIITDGENGLLVPPGDPEALAEAILRLLADPW 346 (377)
T ss_pred HHHHHHHHhcCeeecchhhccCChHHHHHHhcCC-CEEEecCC--ChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcH
Confidence 4567899999999999877777888999999999 67776643 233455555556778888877666555544 2222
Q ss_pred HHHHHHHHHhhhheeEecc
Q 006399 603 YLAMQSRVKMVQKHFLWHK 621 (647)
Q Consensus 603 i~~Mr~~l~~vq~~Flw~~ 621 (647)
....+++...+..+|-|+.
T Consensus 347 ~~~~~~~~~~~~~~~s~~~ 365 (377)
T cd03798 347 LRLGRAARRRVAERFSWEN 365 (377)
T ss_pred HHHhHHHHHHHHHHhhHHH
Confidence 2344444556677777763
No 23
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=95.79 E-value=0.061 Score=55.52 Aligned_cols=92 Identities=21% Similarity=0.165 Sum_probs=62.1
Q ss_pred hHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcCC---CHH
Q 006399 525 IYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSI---PEE 601 (647)
Q Consensus 525 ~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sI---s~e 601 (647)
+..+.|+.+.+.++|...+....-++|||.+|| |||.+|.- ...+++.= ....++..+..++.+.+..+ +++
T Consensus 255 ~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~-PvI~~~~~--~~~e~i~~--~g~~~~~~~~~~~~~~i~~ll~~~~~ 329 (360)
T cd04951 255 DIAAYYNAADLFVLSSAWEGFGLVVAEAMACEL-PVVATDAG--GVREVVGD--SGLIVPISDPEALANKIDEILKMSGE 329 (360)
T ss_pred cHHHHHHhhceEEecccccCCChHHHHHHHcCC-CEEEecCC--ChhhEecC--CceEeCCCCHHHHHHHHHHHHhCCHH
Confidence 467889999999999887777788999999999 88888742 22333321 34556667776665555443 455
Q ss_pred HHHHHHHHHHhhhheeEecc
Q 006399 602 RYLAMQSRVKMVQKHFLWHK 621 (647)
Q Consensus 602 ~i~~Mr~~l~~vq~~Flw~~ 621 (647)
....|.++-..+.+.|-|+.
T Consensus 330 ~~~~~~~~~~~~~~~~s~~~ 349 (360)
T cd04951 330 ERDIIGARRERIVKKFSINS 349 (360)
T ss_pred HHHHHHHHHHHHHHhcCHHH
Confidence 55566665344666676653
No 24
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=95.78 E-value=0.028 Score=59.01 Aligned_cols=104 Identities=13% Similarity=0.121 Sum_probs=65.0
Q ss_pred CCeEEecCCCCCCcchhhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCC
Q 006399 508 DDMKIFGPMPHDVEGKRIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKD 587 (647)
Q Consensus 508 ~dv~I~~~c~~~~~g~~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~d 587 (647)
+.|.+.|..+ .....+.|+.+..+++|.- +..+..++|||++|| |||.++.-- ..+++.=....+.++..+
T Consensus 242 ~~V~~~g~~~-----~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~-Pvi~~~~~~--~~e~i~~~~~G~~~~~~~ 312 (351)
T cd03804 242 PNVTFLGRVS-----DEELRDLYARARAFLFPAE-EDFGIVPVEAMASGT-PVIAYGKGG--ALETVIDGVTGILFEEQT 312 (351)
T ss_pred CCEEEecCCC-----HHHHHHHHHhCCEEEECCc-CCCCchHHHHHHcCC-CEEEeCCCC--CcceeeCCCCEEEeCCCC
Confidence 4566666553 2457889999999999865 545567899999998 999887533 234443345677788777
Q ss_pred hhhHHHHHcCCCHHHHHHHHHHHHhhhheeEecc
Q 006399 588 IPNLRNILLSIPEERYLAMQSRVKMVQKHFLWHK 621 (647)
Q Consensus 588 I~~L~~iL~sIs~e~i~~Mr~~l~~vq~~Flw~~ 621 (647)
...+.+.|..+-...- .+++++.+..++|.|+.
T Consensus 313 ~~~la~~i~~l~~~~~-~~~~~~~~~~~~~~~~~ 345 (351)
T cd03804 313 VESLAAAVERFEKNED-FDPQAIRAHAERFSESR 345 (351)
T ss_pred HHHHHHHHHHHHhCcc-cCHHHHHHHHHhcCHHH
Confidence 7766655554421110 23333333334566654
No 25
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=95.65 E-value=0.03 Score=58.90 Aligned_cols=95 Identities=12% Similarity=0.110 Sum_probs=70.0
Q ss_pred hhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcCC--CHH
Q 006399 524 RIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSI--PEE 601 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sI--s~e 601 (647)
.+..+.+..|..+++|.-.+....-++||+.+|+ |||.++.- ...+++.=....+.++..+..++.+.+..+ .++
T Consensus 294 ~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G~-Pvi~s~~~--~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~ 370 (398)
T cd03800 294 EDLPALYRAADVFVNPALYEPFGLTALEAMACGL-PVVATAVG--GPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPA 370 (398)
T ss_pred HHHHHHHHhCCEEEecccccccCcHHHHHHhcCC-CEEECCCC--CHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCHH
Confidence 4567889999999999877766778999999995 99998742 345556545667788877777666555544 467
Q ss_pred HHHHHHHHHHh-hhheeEecc
Q 006399 602 RYLAMQSRVKM-VQKHFLWHK 621 (647)
Q Consensus 602 ~i~~Mr~~l~~-vq~~Flw~~ 621 (647)
.+.+|.++.++ +.++|-|+.
T Consensus 371 ~~~~~~~~a~~~~~~~~s~~~ 391 (398)
T cd03800 371 LRRRLSRAGLRRARARYTWER 391 (398)
T ss_pred HHHHHHHHHHHHHHHhCCHHH
Confidence 78888887665 447787764
No 26
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=95.58 E-value=0.026 Score=56.77 Aligned_cols=93 Identities=16% Similarity=0.055 Sum_probs=66.2
Q ss_pred hHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcCC--CHHH
Q 006399 525 IYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSI--PEER 602 (647)
Q Consensus 525 ~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sI--s~e~ 602 (647)
+..+.|+.|.+|++|...+..+..++||+.+|| |||.+|.-. ..+.+.=....+.++..+..++.+.+..+ .++.
T Consensus 256 ~~~~~~~~adi~i~ps~~e~~~~~~~Ea~~~G~-Pvi~s~~~~--~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~~~ 332 (359)
T cd03808 256 DVPELLAAADVFVLPSYREGLPRVLLEAMAMGR-PVIATDVPG--CREAVIDGVNGFLVPPGDAEALADAIERLIEDPEL 332 (359)
T ss_pred cHHHHHHhccEEEecCcccCcchHHHHHHHcCC-CEEEecCCC--chhhhhcCcceEEECCCCHHHHHHHHHHHHhCHHH
Confidence 467889999999999887777888999999996 777777532 23444434556778877777766666654 4667
Q ss_pred HHHHHHHHHhh-hheeEec
Q 006399 603 YLAMQSRVKMV-QKHFLWH 620 (647)
Q Consensus 603 i~~Mr~~l~~v-q~~Flw~ 620 (647)
+.+|.++.++. ..+|-|+
T Consensus 333 ~~~~~~~~~~~~~~~~s~~ 351 (359)
T cd03808 333 RARMGQAARKRAEEEFDEE 351 (359)
T ss_pred HHHHHHHHHHHHHHhcCHH
Confidence 77777765544 6666554
No 27
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=95.58 E-value=0.08 Score=53.80 Aligned_cols=87 Identities=15% Similarity=0.082 Sum_probs=64.3
Q ss_pred hhHHHhhccceEEEEecC-CCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcCC--CH
Q 006399 524 RIYREHMKSSKYCICARG-YEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSI--PE 600 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G-~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sI--s~ 600 (647)
.+..+.|..+..|++|.- .+..+..++|||++| +|||.++.- ...+.++.....+.++..+..++.+.+..+ .+
T Consensus 254 ~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G-~Pvi~~~~~--~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~ 330 (359)
T cd03823 254 EEIDDFYAEIDVLVVPSIWPENFPLVIREALAAG-VPVIASDIG--GMAELVRDGVNGLLFPPGDAEDLAAALERLIDDP 330 (359)
T ss_pred HHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCC-CCEEECCCC--CHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhCh
Confidence 567888999999999974 455677899999999 677777642 345667777778888888877666555544 46
Q ss_pred HHHHHHHHHHHhh
Q 006399 601 ERYLAMQSRVKMV 613 (647)
Q Consensus 601 e~i~~Mr~~l~~v 613 (647)
+...+|+++.++.
T Consensus 331 ~~~~~~~~~~~~~ 343 (359)
T cd03823 331 DLLERLRAGIEPP 343 (359)
T ss_pred HHHHHHHHhHHHh
Confidence 7777787765443
No 28
>PRK10307 putative glycosyl transferase; Provisional
Probab=95.37 E-value=0.05 Score=58.91 Aligned_cols=96 Identities=5% Similarity=0.038 Sum_probs=69.7
Q ss_pred hhHHHhhccceEEEEecCCCC----CCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcCC-
Q 006399 524 RIYREHMKSSKYCICARGYEV----HTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSI- 598 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~~~----~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sI- 598 (647)
.+..+.|+.|..+++|.=.+. ....++|||++| +|||.++.--..+.+++. ...+.++..++.++.+.|..+
T Consensus 295 ~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G-~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~ 371 (412)
T PRK10307 295 DRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASG-RNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALA 371 (412)
T ss_pred HHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcC-CCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHH
Confidence 467889999999999854332 234579999999 688888743233445666 467788888888888877765
Q ss_pred -CHHHHHHHHHHHHh-hhheeEeccC
Q 006399 599 -PEERYLAMQSRVKM-VQKHFLWHKK 622 (647)
Q Consensus 599 -s~e~i~~Mr~~l~~-vq~~Flw~~~ 622 (647)
.++...+|+++.++ ++++|-|+.-
T Consensus 372 ~~~~~~~~~~~~a~~~~~~~fs~~~~ 397 (412)
T PRK10307 372 RQALLRPKLGTVAREYAERTLDKENV 397 (412)
T ss_pred hCHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 45677888888775 6778888754
No 29
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=95.35 E-value=0.087 Score=53.28 Aligned_cols=93 Identities=13% Similarity=0.074 Sum_probs=64.9
Q ss_pred hhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcCC--CHH
Q 006399 524 RIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSI--PEE 601 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sI--s~e 601 (647)
.+..+.|+.+.++++|...+..+.-++||+.+|| |||.++.-. ..+.+.= ..+.++..+..++.+.+..+ .++
T Consensus 260 ~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g~-PvI~~~~~~--~~e~~~~--~g~~~~~~~~~~l~~~i~~l~~~~~ 334 (365)
T cd03807 260 SDVPALLNALDVFVLSSLSEGFPNVLLEAMACGL-PVVATDVGD--NAELVGD--TGFLVPPGDPEALAEAIEALLADPA 334 (365)
T ss_pred ccHHHHHHhCCEEEeCCccccCCcHHHHHHhcCC-CEEEcCCCC--hHHHhhc--CCEEeCCCCHHHHHHHHHHHHhChH
Confidence 3467889999999999888777888999999996 788776422 2233322 56677777776666555554 346
Q ss_pred HHHHHHHHHHh-hhheeEecc
Q 006399 602 RYLAMQSRVKM-VQKHFLWHK 621 (647)
Q Consensus 602 ~i~~Mr~~l~~-vq~~Flw~~ 621 (647)
++.+|.++..+ ++++|-|+.
T Consensus 335 ~~~~~~~~~~~~~~~~~s~~~ 355 (365)
T cd03807 335 LRQALGEAARERIEENFSIEA 355 (365)
T ss_pred HHHHHHHHHHHHHHHhCCHHH
Confidence 77777776554 566777764
No 30
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=94.96 E-value=0.15 Score=55.25 Aligned_cols=96 Identities=11% Similarity=0.099 Sum_probs=63.6
Q ss_pred hhHHHhhccceEEEEecCC-CCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceE-EEEcCCChhhHHHHHcC-CCH
Q 006399 524 RIYREHMKSSKYCICARGY-EVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFS-VFVQEKDIPNLRNILLS-IPE 600 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~-~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fS-V~Ipe~dI~~L~~iL~s-Is~ 600 (647)
.+..+.|+.|..|++|..+ +....-++|||++| +|||.++.-- ..|++.=.... +.++..+...+.+.|.. +.+
T Consensus 268 ~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G-~PVI~s~~gg--~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d 344 (380)
T PRK15484 268 EKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAG-KPVLASTKGG--ITEFVLEGITGYHLAEPMTSDSIISDINRTLAD 344 (380)
T ss_pred HHHHHHHHhCCEEEeCCCCccccccHHHHHHHcC-CCEEEeCCCC--cHhhcccCCceEEEeCCCCHHHHHHHHHHHHcC
Confidence 3567889999999999865 55567899999999 7899888532 33544323333 34556666665555533 234
Q ss_pred HHHHHHHHHHH-hhhheeEeccC
Q 006399 601 ERYLAMQSRVK-MVQKHFLWHKK 622 (647)
Q Consensus 601 e~i~~Mr~~l~-~vq~~Flw~~~ 622 (647)
.+..+|.++.+ .+..+|-|+.-
T Consensus 345 ~~~~~~~~~ar~~~~~~fsw~~~ 367 (380)
T PRK15484 345 PELTQIAEQAKDFVFSKYSWEGV 367 (380)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHH
Confidence 44567777665 45778888754
No 31
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=94.92 E-value=0.12 Score=53.05 Aligned_cols=70 Identities=16% Similarity=0.071 Sum_probs=47.9
Q ss_pred hhHHHhhccceEEEEecC-CCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcCC
Q 006399 524 RIYREHMKSSKYCICARG-YEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSI 598 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G-~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sI 598 (647)
.+..+.|+.+.+|++|.- .+.....++|||++|| |||.+|.-- ..++++=..-.+.++. +.++.+.|..+
T Consensus 235 ~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~-PvI~~~~~~--~~e~i~~~~~g~l~~~--~~~l~~~l~~l 305 (335)
T cd03802 235 AEKAELLGNARALLFPILWEEPFGLVMIEAMACGT-PVIAFRRGA--VPEVVEDGVTGFLVDS--VEELAAAVARA 305 (335)
T ss_pred HHHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCC-CEEEeCCCC--chhheeCCCcEEEeCC--HHHHHHHHHHH
Confidence 346788999999999975 3555678999999998 999998643 3355544333444443 55666555544
No 32
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=94.85 E-value=0.24 Score=54.74 Aligned_cols=104 Identities=13% Similarity=0.140 Sum_probs=67.7
Q ss_pred CeEEecCCCCCCcchhhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCC---CCceEEEEcC
Q 006399 509 DMKIFGPMPHDVEGKRIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLN---WEAFSVFVQE 585 (647)
Q Consensus 509 dv~I~~~c~~~~~g~~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLD---Ws~fSV~Ipe 585 (647)
.|.+.+.++ ..+..+.|+.|..++.|.=++....-++|||++||.||. ++. --|..+++. -....+.+.
T Consensus 306 ~V~f~g~v~-----~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa-~~~-ggp~~~iv~~~~~g~~G~l~~- 377 (419)
T cd03806 306 KVEFVVNAP-----FEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLA-HAS-GGPLLDIVVPWDGGPTGFLAS- 377 (419)
T ss_pred eEEEecCCC-----HHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEE-EcC-CCCchheeeccCCCCceEEeC-
Confidence 455555544 246789999999999987666667889999999996664 442 135566664 233333332
Q ss_pred CChhhHHHHHc---CCCHHHHHHHHHHHHhhhheeEecc
Q 006399 586 KDIPNLRNILL---SIPEERYLAMQSRVKMVQKHFLWHK 621 (647)
Q Consensus 586 ~dI~~L~~iL~---sIs~e~i~~Mr~~l~~vq~~Flw~~ 621 (647)
+..++.+.+. ..+++....|+++-+++..+|-|+.
T Consensus 378 -d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~~ 415 (419)
T cd03806 378 -TAEEYAEAIEKILSLSEEERLRIRRAARSSVKRFSDEE 415 (419)
T ss_pred -CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHHH
Confidence 4444433332 2366666678887778888887764
No 33
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=94.73 E-value=0.081 Score=56.11 Aligned_cols=94 Identities=13% Similarity=0.076 Sum_probs=62.7
Q ss_pred hhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcCC--CHH
Q 006399 524 RIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSI--PEE 601 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sI--s~e 601 (647)
....+.|..|.+|++|...+....-++|||.+| +|||.+|.-- ..+.+.-....+.++. +...+.+.+..+ .++
T Consensus 291 ~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G-~PvI~s~~~~--~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~~ 366 (392)
T cd03805 291 SQKELLLSSARALLYTPSNEHFGIVPLEAMYAG-KPVIACNSGG--PLETVVDGETGFLCEP-TPEEFAEAMLKLANDPD 366 (392)
T ss_pred HHHHHHHhhCeEEEECCCcCCCCchHHHHHHcC-CCEEEECCCC--cHHHhccCCceEEeCC-CHHHHHHHHHHHHhChH
Confidence 345688999999999988776677899999999 5777776432 2244433344555554 565554444433 356
Q ss_pred HHHHHHHHHHh-hhheeEecc
Q 006399 602 RYLAMQSRVKM-VQKHFLWHK 621 (647)
Q Consensus 602 ~i~~Mr~~l~~-vq~~Flw~~ 621 (647)
...+|+++.++ +..+|-|+.
T Consensus 367 ~~~~~~~~a~~~~~~~~s~~~ 387 (392)
T cd03805 367 LADRMGAAGRKRVKEKFSTEA 387 (392)
T ss_pred HHHHHHHHHHHHHHHhcCHHH
Confidence 67888887665 567777764
No 34
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=94.69 E-value=0.11 Score=53.88 Aligned_cols=95 Identities=8% Similarity=0.031 Sum_probs=66.8
Q ss_pred hhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcCC--CHH
Q 006399 524 RIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSI--PEE 601 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sI--s~e 601 (647)
..+.+.|+.|.+++.|...+..+.-++|||.+||- ||.++. -+..+.+.=....+.++..+...+.+.|..+ .++
T Consensus 256 ~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~P-vI~~~~--~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~~ 332 (365)
T cd03825 256 ESLALIYSAADVFVVPSLQENFPNTAIEALACGTP-VVAFDV--GGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADPD 332 (365)
T ss_pred HHHHHHHHhCCEEEeccccccccHHHHHHHhcCCC-EEEecC--CCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCHH
Confidence 45678899999999998887778899999999985 666653 3444555544567777777776655555443 456
Q ss_pred HHHHHHHHHHh-hhheeEecc
Q 006399 602 RYLAMQSRVKM-VQKHFLWHK 621 (647)
Q Consensus 602 ~i~~Mr~~l~~-vq~~Flw~~ 621 (647)
++.+|+++.++ +.+.|-|+.
T Consensus 333 ~~~~~~~~~~~~~~~~~s~~~ 353 (365)
T cd03825 333 EREELGEAARELAENEFDSRV 353 (365)
T ss_pred HHHHHHHHHHHHHHHhcCHHH
Confidence 67888887665 345566653
No 35
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=94.57 E-value=0.26 Score=50.81 Aligned_cols=95 Identities=16% Similarity=0.109 Sum_probs=66.4
Q ss_pred hhHHHhhccceEEEEecCC------CCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcC
Q 006399 524 RIYREHMKSSKYCICARGY------EVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLS 597 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~------~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~s 597 (647)
.+..+.|+++.++++|... +.....++||+.+||-.|. ++. ..+.+++.=..-...++..+..++.+.|..
T Consensus 247 ~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~-~~~--~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~ 323 (355)
T cd03799 247 EEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVIS-TDV--SGIPELVEDGETGLLVPPGDPEALADAIER 323 (355)
T ss_pred HHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEe-cCC--CCcchhhhCCCceEEeCCCCHHHHHHHHHH
Confidence 4678899999999998765 5557889999999986654 543 234455554445677777777766555554
Q ss_pred C--CHHHHHHHHHHHHh-hhheeEecc
Q 006399 598 I--PEERYLAMQSRVKM-VQKHFLWHK 621 (647)
Q Consensus 598 I--s~e~i~~Mr~~l~~-vq~~Flw~~ 621 (647)
+ .++++.+|.++.++ +..+|-|+.
T Consensus 324 ~~~~~~~~~~~~~~a~~~~~~~~s~~~ 350 (355)
T cd03799 324 LLDDPELRREMGEAGRARVEEEFDIRK 350 (355)
T ss_pred HHhCHHHHHHHHHHHHHHHHHhcCHHH
Confidence 4 46667888887664 567777764
No 36
>PRK14098 glycogen synthase; Provisional
Probab=94.50 E-value=0.15 Score=57.71 Aligned_cols=96 Identities=14% Similarity=0.182 Sum_probs=65.1
Q ss_pred hHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCC-CC---CceEEEEcCCChhhHHHHHcCC--
Q 006399 525 IYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVL-NW---EAFSVFVQEKDIPNLRNILLSI-- 598 (647)
Q Consensus 525 ~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVL-DW---s~fSV~Ipe~dI~~L~~iL~sI-- 598 (647)
...+.++.|.++++|.-+++...-.+|||++||+||+...+- ++ |.+ |+ ..-.+.++..+...|.+.|..+
T Consensus 374 ~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GG-l~--d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~ 450 (489)
T PRK14098 374 FFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGG-IV--ETIEEVSEDKGSGFIFHDYTPEALVAKLGEALA 450 (489)
T ss_pred HHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCC-Cc--eeeecCCCCCCceeEeCCCCHHHHHHHHHHHHH
Confidence 456789999999999988888888999999999999865432 11 111 22 3456677888877666555431
Q ss_pred ---CHHHHHHHHHHHHhhhheeEeccCCCC
Q 006399 599 ---PEERYLAMQSRVKMVQKHFLWHKKPKK 625 (647)
Q Consensus 599 ---s~e~i~~Mr~~l~~vq~~Flw~~~p~~ 625 (647)
.++++.+|+++. +.+.|-|+....+
T Consensus 451 ~~~~~~~~~~~~~~~--~~~~fsw~~~a~~ 478 (489)
T PRK14098 451 LYHDEERWEELVLEA--MERDFSWKNSAEE 478 (489)
T ss_pred HHcCHHHHHHHHHHH--hcCCCChHHHHHH
Confidence 356666666543 4567888765433
No 37
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=94.47 E-value=0.074 Score=56.34 Aligned_cols=95 Identities=18% Similarity=0.174 Sum_probs=68.1
Q ss_pred hhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCCh------hhHHHHHcC
Q 006399 524 RIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDI------PNLRNILLS 597 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI------~~L~~iL~s 597 (647)
.+..+.|..|..+++|.-++....-++||+.+|| |||.+|.-- ..+++.=....+.++..+. ..+.+.|..
T Consensus 272 ~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~-PvI~s~~~~--~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~ 348 (388)
T TIGR02149 272 EELVELLSNAEVFVCPSIYEPLGIVNLEAMACGT-PVVASATGG--IPEVVVDGETGFLVPPDNSDADGFQAELAKAINI 348 (388)
T ss_pred HHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCC-CEEEeCCCC--HHHHhhCCCceEEcCCCCCcccchHHHHHHHHHH
Confidence 4578889999999999877666777899999999 899887532 3455544455667776665 555555544
Q ss_pred C--CHHHHHHHHHHHHh-hhheeEecc
Q 006399 598 I--PEERYLAMQSRVKM-VQKHFLWHK 621 (647)
Q Consensus 598 I--s~e~i~~Mr~~l~~-vq~~Flw~~ 621 (647)
+ .+++..+|.++.++ +.++|-|+.
T Consensus 349 l~~~~~~~~~~~~~a~~~~~~~~s~~~ 375 (388)
T TIGR02149 349 LLADPELAKKMGIAGRKRAEEEFSWGS 375 (388)
T ss_pred HHhCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 3 57777888887665 566787764
No 38
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=94.44 E-value=0.19 Score=55.93 Aligned_cols=93 Identities=15% Similarity=0.232 Sum_probs=63.5
Q ss_pred hHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCC-CCC-----ceEEEEcCCChhhHHHHHcCC
Q 006399 525 IYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVL-NWE-----AFSVFVQEKDIPNLRNILLSI 598 (647)
Q Consensus 525 ~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVL-DWs-----~fSV~Ipe~dI~~L~~iL~sI 598 (647)
...+.++.+.++++|.-+++...-.+|||.+||.||. ++.-- ..|++ |.. ...+.++..+...+.+.|..+
T Consensus 358 ~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~-s~~gg--~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~ 434 (473)
T TIGR02095 358 LAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIV-RRTGG--LADTVVDGDPEAESGTGFLFEEYDPGALLAALSRA 434 (473)
T ss_pred HHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEE-ccCCC--ccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHH
Confidence 4567899999999999888888889999999996654 54322 23333 321 567778888877666554432
Q ss_pred ------CHHHHHHHHHHHHhhhheeEeccC
Q 006399 599 ------PEERYLAMQSRVKMVQKHFLWHKK 622 (647)
Q Consensus 599 ------s~e~i~~Mr~~l~~vq~~Flw~~~ 622 (647)
.++...+|.++. +++.|-|+.-
T Consensus 435 l~~~~~~~~~~~~~~~~~--~~~~fsw~~~ 462 (473)
T TIGR02095 435 LRLYRQDPSLWEALQKNA--MSQDFSWDKS 462 (473)
T ss_pred HHHHhcCHHHHHHHHHHH--hccCCCcHHH
Confidence 456677777654 2456777753
No 39
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=94.42 E-value=0.094 Score=55.90 Aligned_cols=89 Identities=17% Similarity=0.225 Sum_probs=65.3
Q ss_pred hhHHHhhccceEEEEecCCC-----------CCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHH
Q 006399 524 RIYREHMKSSKYCICARGYE-----------VHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLR 592 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~~-----------~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~ 592 (647)
.+..+.|.. .|+|++.+++ .....++++|++|+ |||.++.-.++ +++.=....+.++ ++.++.
T Consensus 218 eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~-PVI~~~~~~~~--~~V~~~~~G~~v~--~~~el~ 291 (333)
T PRK09814 218 EELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGL-PVIVWSKAAIA--DFIVENGLGFVVD--SLEELP 291 (333)
T ss_pred HHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCC-CEEECCCccHH--HHHHhCCceEEeC--CHHHHH
Confidence 445566665 9999987761 12345888888885 99998764333 5555566777776 677899
Q ss_pred HHHcCCCHHHHHHHHHHHHhhhheeE
Q 006399 593 NILLSIPEERYLAMQSRVKMVQKHFL 618 (647)
Q Consensus 593 ~iL~sIs~e~i~~Mr~~l~~vq~~Fl 618 (647)
+.|..++++++.+|+++.+++.+++-
T Consensus 292 ~~l~~~~~~~~~~m~~n~~~~~~~~~ 317 (333)
T PRK09814 292 EIIDNITEEEYQEMVENVKKISKLLR 317 (333)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998877643
No 40
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=94.35 E-value=0.26 Score=51.05 Aligned_cols=103 Identities=23% Similarity=0.349 Sum_probs=63.9
Q ss_pred CCeEEecCCCCCCcchhhHHHhhccceEEEEecCC-CCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCC
Q 006399 508 DDMKIFGPMPHDVEGKRIYREHMKSSKYCICARGY-EVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEK 586 (647)
Q Consensus 508 ~dv~I~~~c~~~~~g~~~Y~e~m~~SkFCL~P~G~-~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~ 586 (647)
+.+.+.|..++ ....+.+..+..++.|.-. +....-++|||.+|| |||.++.- +..+++.- -...++..
T Consensus 248 ~~V~~~g~~~~-----~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~-PvI~s~~~--~~~e~~~~--~g~~~~~~ 317 (363)
T cd04955 248 PRIIFVGPIYD-----QELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGC-PVLASDNP--FNREVLGD--KAIYFKVG 317 (363)
T ss_pred CcEEEccccCh-----HHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCC-CEEEecCC--ccceeecC--CeeEecCc
Confidence 45556555442 3567888888988888665 556677999999999 77777643 34455543 23344545
Q ss_pred C-hhhHHHHHcCCCHHHHHHHHHHHHh-hhheeEecc
Q 006399 587 D-IPNLRNILLSIPEERYLAMQSRVKM-VQKHFLWHK 621 (647)
Q Consensus 587 d-I~~L~~iL~sIs~e~i~~Mr~~l~~-vq~~Flw~~ 621 (647)
+ +.+....|.. .++.+.+|.++.++ +..+|-|+.
T Consensus 318 ~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~fs~~~ 353 (363)
T cd04955 318 DDLASLLEELEA-DPEEVSAMAKAARERIREKYTWEK 353 (363)
T ss_pred hHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHH
Confidence 5 4333333333 23667778777664 445677764
No 41
>PRK00654 glgA glycogen synthase; Provisional
Probab=94.01 E-value=0.2 Score=56.00 Aligned_cols=93 Identities=13% Similarity=0.229 Sum_probs=63.2
Q ss_pred HHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCC-CCC-----ceEEEEcCCChhhHHHHHcCC-
Q 006399 526 YREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVL-NWE-----AFSVFVQEKDIPNLRNILLSI- 598 (647)
Q Consensus 526 Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVL-DWs-----~fSV~Ipe~dI~~L~~iL~sI- 598 (647)
....++.|.+++.|.=+++...-.+|||.+||+||+ ++.-- ..|.+ |.. .-.+.++..+...|.+.|..+
T Consensus 350 ~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~-~~~gG--~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l 426 (466)
T PRK00654 350 AHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIV-RRTGG--LADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRAL 426 (466)
T ss_pred HHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEE-eCCCC--ccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHH
Confidence 457789999999999888888899999999998877 44221 22332 331 457778888887766655543
Q ss_pred ----CHHHHHHHHHHHHhhhheeEeccCC
Q 006399 599 ----PEERYLAMQSRVKMVQKHFLWHKKP 623 (647)
Q Consensus 599 ----s~e~i~~Mr~~l~~vq~~Flw~~~p 623 (647)
.++...+|.++.. +.+|-|+.-.
T Consensus 427 ~~~~~~~~~~~~~~~~~--~~~fsw~~~a 453 (466)
T PRK00654 427 ELYRQPPLWRALQRQAM--AQDFSWDKSA 453 (466)
T ss_pred HHhcCHHHHHHHHHHHh--ccCCChHHHH
Confidence 3455666666542 4667777543
No 42
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=93.89 E-value=0.6 Score=47.51 Aligned_cols=90 Identities=16% Similarity=0.143 Sum_probs=59.4
Q ss_pred hhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcCC--CHH
Q 006399 524 RIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSI--PEE 601 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sI--s~e 601 (647)
.+..+.|..|.++++|...+..+..++|||.+|| |||.++.- .+.+.+.=....+.++..+. ++.+.+..+ .++
T Consensus 270 ~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~-PvI~~~~~--~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~ 345 (374)
T cd03817 270 EELPDYYKAADLFVFASTTETQGLVLLEAMAAGL-PVVAVDAP--GLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPE 345 (374)
T ss_pred HHHHHHHHHcCEEEecccccCcChHHHHHHHcCC-cEEEeCCC--ChhhheecCceeEEeCCCCH-HHHHHHHHHHhChH
Confidence 4678899999999999887777788999999987 55555532 23455544455666666553 444333333 345
Q ss_pred HHHHHHHHHHhhhhee
Q 006399 602 RYLAMQSRVKMVQKHF 617 (647)
Q Consensus 602 ~i~~Mr~~l~~vq~~F 617 (647)
...+|+++.++...++
T Consensus 346 ~~~~~~~~~~~~~~~~ 361 (374)
T cd03817 346 LRRRLSKNAEESAEKF 361 (374)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5677888777655543
No 43
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=93.69 E-value=0.31 Score=52.77 Aligned_cols=98 Identities=16% Similarity=0.095 Sum_probs=61.3
Q ss_pred hhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcCC---CH
Q 006399 524 RIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSI---PE 600 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sI---s~ 600 (647)
.+..+.+..+..++.|.-.+.....++|||++|| |||.++.-- ..|++.=. ..+.++. +...+.+.|..+ +.
T Consensus 261 ~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~-PVI~s~~gg--~~e~i~~~-~~~~~~~-~~~~l~~~l~~~l~~~~ 335 (398)
T cd03796 261 ERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCGL-LVVSTRVGG--IPEVLPPD-MILLAEP-DVESIVRKLEEAISILR 335 (398)
T ss_pred HHHHHHHHhCCEEEeCChhhccCHHHHHHHHcCC-CEEECCCCC--chhheeCC-ceeecCC-CHHHHHHHHHHHHhChh
Confidence 4678899999999998766656678999999998 556666533 33555433 2344443 555444443322 22
Q ss_pred HHHHHHHHHHHhhhheeEeccCCCCc
Q 006399 601 ERYLAMQSRVKMVQKHFLWHKKPKKY 626 (647)
Q Consensus 601 e~i~~Mr~~l~~vq~~Flw~~~p~~~ 626 (647)
++...+++...++..+|-|+.-...+
T Consensus 336 ~~~~~~~~~~~~~~~~fs~~~~~~~~ 361 (398)
T cd03796 336 TGKHDPWSFHNRVKKMYSWEDVAKRT 361 (398)
T ss_pred hhhhHHHHHHHHHHhhCCHHHHHHHH
Confidence 33233455556688889888754443
No 44
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=93.58 E-value=0.42 Score=52.54 Aligned_cols=124 Identities=15% Similarity=0.206 Sum_probs=74.0
Q ss_pred eEEEEeeccCCcchHHHHHHhhcCC-CCeEEe-cCCCCCCcchhhHHHhhccceEEEEec----CCCCCCchHHHHhhcC
Q 006399 483 TLAFFAGRMHGYLRPILLNFWENKV-DDMKIF-GPMPHDVEGKRIYREHMKSSKYCICAR----GYEVHTPRVVEAIFYE 556 (647)
Q Consensus 483 ~LafFaG~~~G~iR~~L~~~w~n~~-~dv~I~-~~c~~~~~g~~~Y~e~m~~SkFCL~P~----G~~~~S~Rl~EAL~aG 556 (647)
+.+.+.|. |..|..+.+..+... .++.++ +..+ ..++.+.|..|..+++|. |.+ ...-++|||++|
T Consensus 270 i~l~ivG~--G~~~~~l~~~~~~~~l~~~~~~~g~~~-----~~~~~~~l~~aDv~v~~~~~~~~~~-~p~~~~Eama~G 341 (415)
T cd03816 270 LLCIITGK--GPLKEKYLERIKELKLKKVTIRTPWLS-----AEDYPKLLASADLGVSLHTSSSGLD-LPMKVVDMFGCG 341 (415)
T ss_pred EEEEEEec--CccHHHHHHHHHHcCCCcEEEEcCcCC-----HHHHHHHHHhCCEEEEccccccccC-CcHHHHHHHHcC
Confidence 56666774 555555544443221 244444 3333 356888999999988643 222 356799999999
Q ss_pred cEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcCC-----CHHHHHHHHHHHHhhhheeEec
Q 006399 557 CVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSI-----PEERYLAMQSRVKMVQKHFLWH 620 (647)
Q Consensus 557 CIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sI-----s~e~i~~Mr~~l~~vq~~Flw~ 620 (647)
+ |||.++.- ...|++.=....+.++ +..+|.+.|..+ ++++..+|.++.++.. .+-|+
T Consensus 342 ~-PVI~s~~~--~~~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~-~~~~~ 404 (415)
T cd03816 342 L-PVCALDFK--CIDELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES-ELRWD 404 (415)
T ss_pred C-CEEEeCCC--CHHHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh-hcCHH
Confidence 9 99998853 2335554343444443 555555444433 2678888988776654 33443
No 45
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=93.46 E-value=0.28 Score=52.30 Aligned_cols=86 Identities=14% Similarity=0.154 Sum_probs=58.3
Q ss_pred CCeEEecCCCCCCcchhhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCC
Q 006399 508 DDMKIFGPMPHDVEGKRIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKD 587 (647)
Q Consensus 508 ~dv~I~~~c~~~~~g~~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~d 587 (647)
+.+.+.|..... ...+.+.++.+..+++|..++....-++|||++| +|||.+|..-- ..+++.=....+.++..+
T Consensus 236 ~~v~f~G~~~~~---~~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G-~Pvv~s~~~~g-~~eiv~~~~~G~lv~~~d 310 (359)
T PRK09922 236 QRIIWHGWQSQP---WEVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYG-IPCISSDCMSG-PRDIIKPGLNGELYTPGN 310 (359)
T ss_pred CeEEEecccCCc---HHHHHHHHhcCcEEEECCcccCcChHHHHHHHcC-CCEEEeCCCCC-hHHHccCCCceEEECCCC
Confidence 456666543211 1345677888999999988777788999999999 68888872221 225554455666778888
Q ss_pred hhhHHHHHcCC
Q 006399 588 IPNLRNILLSI 598 (647)
Q Consensus 588 I~~L~~iL~sI 598 (647)
+.++.+.+..+
T Consensus 311 ~~~la~~i~~l 321 (359)
T PRK09922 311 IDEFVGKLNKV 321 (359)
T ss_pred HHHHHHHHHHH
Confidence 88777666654
No 46
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=93.21 E-value=0.98 Score=45.14 Aligned_cols=89 Identities=17% Similarity=0.090 Sum_probs=59.2
Q ss_pred hHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhH----HHHHcCCC-
Q 006399 525 IYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNL----RNILLSIP- 599 (647)
Q Consensus 525 ~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L----~~iL~sIs- 599 (647)
+..+.+..+.++++|.-.+..+..++||+.+||. ||.+|.- ...+++.=....+.++..+...+ ..++....
T Consensus 256 ~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~P-vI~~~~~--~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 332 (353)
T cd03811 256 NPYPYLKAADLFVLSSRYEGFPNVLLEAMALGTP-VVATDCP--GPREILEDGENGLLVPVGDEAALAAAALALLDLLLD 332 (353)
T ss_pred CHHHHHHhCCEEEeCcccCCCCcHHHHHHHhCCC-EEEcCCC--ChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCC
Confidence 3467899999999998776667889999999985 5555543 33456655667778888887765 33333333
Q ss_pred HHHHHHHHH-HHHhhhhe
Q 006399 600 EERYLAMQS-RVKMVQKH 616 (647)
Q Consensus 600 ~e~i~~Mr~-~l~~vq~~ 616 (647)
++...+|.+ +...+..+
T Consensus 333 ~~~~~~~~~~~~~~~~~~ 350 (353)
T cd03811 333 PELRERLAAAARERVARE 350 (353)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 455566666 34444443
No 47
>PRK14099 glycogen synthase; Provisional
Probab=93.19 E-value=0.44 Score=54.01 Aligned_cols=97 Identities=13% Similarity=0.113 Sum_probs=65.7
Q ss_pred hHHHhh-ccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCC--------ceEEEEcCCChhhHHHHH
Q 006399 525 IYREHM-KSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWE--------AFSVFVQEKDIPNLRNIL 595 (647)
Q Consensus 525 ~Y~e~m-~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs--------~fSV~Ipe~dI~~L~~iL 595 (647)
+....+ +.|.+.+.|.=+++...-.+|||++||+||+ ++.=-+| +-+.|.. ...+.++..+...|.+.|
T Consensus 361 ~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVv-s~~GGl~-d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai 438 (485)
T PRK14099 361 ALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVV-ARVGGLA-DTVVDANEMAIATGVATGVQFSPVTADALAAAL 438 (485)
T ss_pred HHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEE-eCCCCcc-ceeecccccccccCCCceEEeCCCCHHHHHHHH
Confidence 345555 4699999998888888999999999999988 5421121 1123442 357788888887776665
Q ss_pred cC----C-CHHHHHHHHHHHHhhhheeEeccCCCC
Q 006399 596 LS----I-PEERYLAMQSRVKMVQKHFLWHKKPKK 625 (647)
Q Consensus 596 ~s----I-s~e~i~~Mr~~l~~vq~~Flw~~~p~~ 625 (647)
.. + .++...+|+++.. .+.|-|+....+
T Consensus 439 ~~a~~l~~d~~~~~~l~~~~~--~~~fSw~~~a~~ 471 (485)
T PRK14099 439 RKTAALFADPVAWRRLQRNGM--TTDVSWRNPAQH 471 (485)
T ss_pred HHHHHHhcCHHHHHHHHHHhh--hhcCChHHHHHH
Confidence 43 2 4667777887653 467888865433
No 48
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=92.97 E-value=0.83 Score=47.09 Aligned_cols=94 Identities=12% Similarity=0.070 Sum_probs=65.1
Q ss_pred hhHHHhhccceEEEEecC--CCCCCchHHHHhhcCcEEEEecCCccCCCCCCC-CCCceEEEEcCCChhhHHHHHcCC--
Q 006399 524 RIYREHMKSSKYCICARG--YEVHTPRVVEAIFYECVPVIISDNYVPPFFEVL-NWEAFSVFVQEKDIPNLRNILLSI-- 598 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G--~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVL-DWs~fSV~Ipe~dI~~L~~iL~sI-- 598 (647)
..+.+.++.+..|++|.- .+.....++||+.+|| |||.++.-..+ +.+ +.......++..+..++.+.+..+
T Consensus 255 ~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~-Pvi~~~~~~~~--~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~ 331 (357)
T cd03795 255 EEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGK-PVISTEIGTGG--SYVNLHGVTGLVVPPGDPAALAEAIRRLLE 331 (357)
T ss_pred HHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCC-CEEecCCCCch--hHHhhCCCceEEeCCCCHHHHHHHHHHHHH
Confidence 457788999999999853 2344567999999975 67777633222 222 246677788888887766666654
Q ss_pred CHHHHHHHHHHHHh-hhheeEec
Q 006399 599 PEERYLAMQSRVKM-VQKHFLWH 620 (647)
Q Consensus 599 s~e~i~~Mr~~l~~-vq~~Flw~ 620 (647)
.++++.+|+++.++ ++++|-|+
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~s~~ 354 (357)
T cd03795 332 DPELRERLGEAARERAEEEFTAD 354 (357)
T ss_pred CHHHHHHHHHHHHHHHHHhcchH
Confidence 57788889888776 56677665
No 49
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=92.96 E-value=0.16 Score=53.67 Aligned_cols=94 Identities=16% Similarity=0.156 Sum_probs=67.5
Q ss_pred hHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCC-ccCCCCCCCCCCceEEEEcCCChhhHHHHHcCC--CHH
Q 006399 525 IYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDN-YVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSI--PEE 601 (647)
Q Consensus 525 ~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~-~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sI--s~e 601 (647)
+..+.++.+..++.|.-.+....-++|||.+|| |||.++- +.. .+.+.=....+.++..+..++.+.|..+ .++
T Consensus 271 ~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~-PvI~~~~~~g~--~~~v~~~~~G~lv~~~d~~~la~~i~~ll~~~~ 347 (372)
T cd04949 271 DLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGL-PVISYDVNYGP--SEIIEDGENGYLVPKGDIEALAEAIIELLNDPK 347 (372)
T ss_pred CHHHHHhhhhEEEecccccccChHHHHHHhCCC-CEEEecCCCCc--HHHcccCCCceEeCCCcHHHHHHHHHHHHcCHH
Confidence 456788999999999866666778999999999 7777662 222 2444445566778877877666655544 467
Q ss_pred HHHHHHHHHHhhhheeEecc
Q 006399 602 RYLAMQSRVKMVQKHFLWHK 621 (647)
Q Consensus 602 ~i~~Mr~~l~~vq~~Flw~~ 621 (647)
.+.+|+++..+...+|.|..
T Consensus 348 ~~~~~~~~a~~~~~~~s~~~ 367 (372)
T cd04949 348 LLQKFSEAAYENAERYSEEN 367 (372)
T ss_pred HHHHHHHHHHHHHHHhhHHH
Confidence 88889988877777776653
No 50
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=92.91 E-value=0.19 Score=55.53 Aligned_cols=94 Identities=13% Similarity=0.146 Sum_probs=65.6
Q ss_pred HHHhhccc----eEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcCC--C
Q 006399 526 YREHMKSS----KYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSI--P 599 (647)
Q Consensus 526 Y~e~m~~S----kFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sI--s 599 (647)
..+.++.+ ..++.|.-++....-++|||++|| |||.++.- ...|++.=..-.+.++..+...|.+.+..+ .
T Consensus 330 ~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~-PvV~s~~g--g~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~ 406 (439)
T TIGR02472 330 VPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGL-PIVATDDG--GPRDIIANCRNGLLVDVLDLEAIASALEDALSD 406 (439)
T ss_pred HHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCC-CEEEeCCC--CcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhC
Confidence 34455544 556667766666778999999999 99999853 345666555677888888887766655544 4
Q ss_pred HHHHHHHHHHHH-hhhheeEeccC
Q 006399 600 EERYLAMQSRVK-MVQKHFLWHKK 622 (647)
Q Consensus 600 ~e~i~~Mr~~l~-~vq~~Flw~~~ 622 (647)
+++..+|.++.+ .+..+|-|+.-
T Consensus 407 ~~~~~~~~~~a~~~~~~~fsw~~~ 430 (439)
T TIGR02472 407 SSQWQLWSRNGIEGVRRHYSWDAH 430 (439)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHH
Confidence 566677777655 46778888753
No 51
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=92.74 E-value=0.98 Score=48.21 Aligned_cols=107 Identities=17% Similarity=0.131 Sum_probs=68.8
Q ss_pred CCeEEecCCCCCCcchhhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCC
Q 006399 508 DDMKIFGPMPHDVEGKRIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKD 587 (647)
Q Consensus 508 ~dv~I~~~c~~~~~g~~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~d 587 (647)
+++.+.+..+ .........++.+..++.|..++....-++||+++| +|||.++.--++ +++.-....+.++..+
T Consensus 252 ~~v~~~~~~~---~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G-~Pvv~s~~~~~~--~~i~~~~~g~~~~~~~ 325 (372)
T cd03792 252 PDIHVLTLPP---VSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKG-KPVIAGPVGGIP--LQIEDGETGFLVDTVE 325 (372)
T ss_pred CCeEEEecCC---CCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcC-CCEEEcCCCCch--hhcccCCceEEeCCcH
Confidence 4555555431 012456788999999999988777778999999999 599999854333 4444334444444322
Q ss_pred -h-hhHHHHHcCCCHHHHHHHHHHHHh-hhheeEeccC
Q 006399 588 -I-PNLRNILLSIPEERYLAMQSRVKM-VQKHFLWHKK 622 (647)
Q Consensus 588 -I-~~L~~iL~sIs~e~i~~Mr~~l~~-vq~~Flw~~~ 622 (647)
+ ..|...|. .++...+|.++.++ +..+|.|+.-
T Consensus 326 ~~a~~i~~ll~--~~~~~~~~~~~a~~~~~~~~s~~~~ 361 (372)
T cd03792 326 EAAVRILYLLR--DPELRRKMGANAREHVRENFLITRH 361 (372)
T ss_pred HHHHHHHHHHc--CHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 1 12334333 46777888887766 5677888753
No 52
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=92.55 E-value=0.71 Score=50.62 Aligned_cols=93 Identities=16% Similarity=0.149 Sum_probs=59.4
Q ss_pred hHHHhhcc--ceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcC-CChhhHHHHHcCC--C
Q 006399 525 IYREHMKS--SKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQE-KDIPNLRNILLSI--P 599 (647)
Q Consensus 525 ~Y~e~m~~--SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe-~dI~~L~~iL~sI--s 599 (647)
+..+.++. +..++.|...+....-++|||++|| |||.+|.-- ..++++=..-.+.++. .+..++.+.|..+ .
T Consensus 301 e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~-PVIas~vgg--~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~~ 377 (407)
T cd04946 301 EVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGI-PVIATNVGG--TPEIVDNGGNGLLLSKDPTPNELVSSLSKFIDN 377 (407)
T ss_pred HHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCC-CEEeCCCCC--cHHHhcCCCcEEEeCCCCCHHHHHHHHHHHHhC
Confidence 34456654 3344456555555677999999996 999988433 3466654545566655 3566555555544 5
Q ss_pred HHHHHHHHHHHHh-hhheeEec
Q 006399 600 EERYLAMQSRVKM-VQKHFLWH 620 (647)
Q Consensus 600 ~e~i~~Mr~~l~~-vq~~Flw~ 620 (647)
+++..+|+++.++ +..+|-|+
T Consensus 378 ~~~~~~m~~~ar~~~~~~f~~~ 399 (407)
T cd04946 378 EEEYQTMREKAREKWEENFNAS 399 (407)
T ss_pred HHHHHHHHHHHHHHHHHHcCHH
Confidence 7888899888665 44566655
No 53
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=91.92 E-value=0.71 Score=51.05 Aligned_cols=92 Identities=12% Similarity=0.232 Sum_probs=61.3
Q ss_pred hHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCC-CCCC-----ceEEEEcCCChhhHHHHHcCC
Q 006399 525 IYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEV-LNWE-----AFSVFVQEKDIPNLRNILLSI 598 (647)
Q Consensus 525 ~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdV-LDWs-----~fSV~Ipe~dI~~L~~iL~sI 598 (647)
...+.++.+.+++.|.-+++...-.+|||++||.||.- +.- ...|. .|.. .-.+.++..+...+.+.|..+
T Consensus 363 ~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~-~~g--g~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~ 439 (476)
T cd03791 363 LAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVR-ATG--GLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRA 439 (476)
T ss_pred HHHHHHHhCCEEECCCCCCCCcHHHHHHhhCCCCCEEC-cCC--CccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHH
Confidence 34578889999999988888888899999999998753 321 12233 3332 156777777777666555442
Q ss_pred -----CHHHHHHHHHHHHhhhheeEecc
Q 006399 599 -----PEERYLAMQSRVKMVQKHFLWHK 621 (647)
Q Consensus 599 -----s~e~i~~Mr~~l~~vq~~Flw~~ 621 (647)
.++...+|.++.. +..|-|+.
T Consensus 440 l~~~~~~~~~~~~~~~~~--~~~fsw~~ 465 (476)
T cd03791 440 LALYRDPEAWRKLQRNAM--AQDFSWDR 465 (476)
T ss_pred HHHHcCHHHHHHHHHHHh--ccCCChHH
Confidence 2566777776543 34566664
No 54
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=91.85 E-value=0.5 Score=51.10 Aligned_cols=92 Identities=14% Similarity=0.211 Sum_probs=60.4
Q ss_pred hHHHhhccceEEEEec--CCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcCC--CH
Q 006399 525 IYREHMKSSKYCICAR--GYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSI--PE 600 (647)
Q Consensus 525 ~Y~e~m~~SkFCL~P~--G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sI--s~ 600 (647)
+....+..+..+++|. |.+ ....++|||.+|| |||.++.- .+.+..=....+.++ .+..++.+.+..+ .+
T Consensus 290 ~~~~~~~~adv~v~Ps~~~eG-~~~~~lEAma~G~-PVV~t~~~---~~~i~~~~~~g~lv~-~~~~~la~ai~~ll~~~ 363 (397)
T TIGR03087 290 DVRPYLAHAAVAVAPLRIARG-IQNKVLEAMAMAK-PVVASPEA---AEGIDALPGAELLVA-ADPADFAAAILALLANP 363 (397)
T ss_pred CHHHHHHhCCEEEecccccCC-cccHHHHHHHcCC-CEEecCcc---cccccccCCcceEeC-CCHHHHHHHHHHHHcCH
Confidence 4567789999999985 333 3457999999998 99998742 122211123345566 6666665555443 46
Q ss_pred HHHHHHHHHHHh-hhheeEeccC
Q 006399 601 ERYLAMQSRVKM-VQKHFLWHKK 622 (647)
Q Consensus 601 e~i~~Mr~~l~~-vq~~Flw~~~ 622 (647)
+...+|.++.++ +..+|-|+.-
T Consensus 364 ~~~~~~~~~ar~~v~~~fsw~~~ 386 (397)
T TIGR03087 364 AEREELGQAARRRVLQHYHWPRN 386 (397)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHH
Confidence 667888887665 5678888743
No 55
>PLN02949 transferase, transferring glycosyl groups
Probab=91.37 E-value=0.35 Score=54.64 Aligned_cols=96 Identities=14% Similarity=0.158 Sum_probs=60.0
Q ss_pred hhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCC-CCC-ceEEEEcCCChhhHHHHHcCC---
Q 006399 524 RIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVL-NWE-AFSVFVQEKDIPNLRNILLSI--- 598 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVL-DWs-~fSV~Ipe~dI~~L~~iL~sI--- 598 (647)
.+..+.|+++.+++.|+-++....-++|||++||+||.-... =|-.+++ ++. .-.-++. .++..+.+.+..+
T Consensus 346 ~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~g--Gp~~eIV~~~~~g~tG~l~-~~~~~la~ai~~ll~~ 422 (463)
T PLN02949 346 RDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSA--GPKMDIVLDEDGQQTGFLA-TTVEEYADAILEVLRM 422 (463)
T ss_pred HHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCC--CCcceeeecCCCCcccccC-CCHHHHHHHHHHHHhC
Confidence 356778999999998877776778899999999877775432 1323332 221 0111111 2555554444332
Q ss_pred CHHHHHHHHHHHHhhhheeEeccC
Q 006399 599 PEERYLAMQSRVKMVQKHFLWHKK 622 (647)
Q Consensus 599 s~e~i~~Mr~~l~~vq~~Flw~~~ 622 (647)
++++..+|+++.++...+|-|+..
T Consensus 423 ~~~~r~~m~~~ar~~~~~FS~e~~ 446 (463)
T PLN02949 423 RETERLEIAAAARKRANRFSEQRF 446 (463)
T ss_pred CHHHHHHHHHHHHHHHHHcCHHHH
Confidence 567778898887765566887753
No 56
>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=91.25 E-value=0.95 Score=50.02 Aligned_cols=157 Identities=14% Similarity=0.176 Sum_probs=95.8
Q ss_pred CCCcccCcceeCcccccCCCC-CcCC-CCCCCCCCCCceEEEEeeccC-CcchHHHHHHhhcCCCCeEEecCCCCC---C
Q 006399 447 SKGFKIGMDTSLPVTYIRSAE-APLD-NLGGNPPLKRSTLAFFAGRMH-GYLRPILLNFWENKVDDMKIFGPMPHD---V 520 (647)
Q Consensus 447 ~~~FRpg~DVsIP~~~~~~~~-~pl~-~l~~~~p~~R~~LafFaG~~~-G~iR~~L~~~w~n~~~dv~I~~~c~~~---~ 520 (647)
..+||.+-|+-.|+-+..... .+.. +....-..+++.++.+..... ...|..+++.+... -.+.++|.|-+. .
T Consensus 160 T~Tyr~dSd~~~pygy~~~~~~~~~~~p~~~~~~~k~~~~aw~vSnc~~~~~R~~~~~~L~k~-l~iD~YG~c~~~~~~~ 238 (372)
T KOG2619|consen 160 TMTYRRDSDLFVPYGYLEKPEANPVLVPVNSILSAKTKLAAWLVSNCIPRSARLDYYKELMKH-LEIDSYGECLRKNANR 238 (372)
T ss_pred eEEEeccCCCCCccceEeecccCceecccccccccccceeeeeccccCcchHHHHHHHHHHhh-CceeeccccccccccC
Confidence 357888889999985444333 3321 122112345666777766553 23555555544333 456778888641 1
Q ss_pred cchhhHHHhhccceEEEEecC---CCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcC-CChhhHHHHHc
Q 006399 521 EGKRIYREHMKSSKYCICARG---YEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQE-KDIPNLRNILL 596 (647)
Q Consensus 521 ~g~~~Y~e~m~~SkFCL~P~G---~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe-~dI~~L~~iL~ 596 (647)
.....-.+.+..-||-|.--- ...-+.-|+.|+.+|.|||+++......| ++ ....|.|+. ..+.+|...|+
T Consensus 239 ~~~~~~~~~~s~YKFyLAfENS~c~DYVTEKfw~al~~gsVPVvlg~~n~e~f---vP-~~SfI~vdDF~s~~ela~ylk 314 (372)
T KOG2619|consen 239 DPSDCLLETLSHYKFYLAFENSNCEDYVTEKFWNALDAGSVPVVLGPPNYENF---VP-PDSFIHVDDFQSPQELAAYLK 314 (372)
T ss_pred CCCCcceeecccceEEEEecccCCcccccHHHHhhhhcCcccEEECCcccccc---CC-CcceEehhhcCCHHHHHHHHH
Confidence 123445788889999997422 12236889999999999999998554333 33 455555544 34568999999
Q ss_pred CCC--HHHHHHHHH
Q 006399 597 SIP--EERYLAMQS 608 (647)
Q Consensus 597 sIs--~e~i~~Mr~ 608 (647)
.+. ++.|.+-.+
T Consensus 315 ~L~~n~~~Y~~Yf~ 328 (372)
T KOG2619|consen 315 KLDKNPAAYLSYFE 328 (372)
T ss_pred HhhcCHHHHHHHHH
Confidence 984 555555444
No 57
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=90.66 E-value=1.7 Score=45.05 Aligned_cols=70 Identities=14% Similarity=0.004 Sum_probs=46.7
Q ss_pred hHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcCC
Q 006399 525 IYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSI 598 (647)
Q Consensus 525 ~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sI 598 (647)
+..+.+..+.++++|.-.+..+.-++|||.+||-+ |.++.- +..+++.= .........+..++.+.+..+
T Consensus 259 ~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~Pv-I~s~~~--~~~~~i~~-~~~~~~~~~~~~~~a~~i~~l 328 (358)
T cd03812 259 DVPELLQAMDVFLFPSLYEGLPLVLIEAQASGLPC-ILSDTI--TKEVDLTD-LVKFLSLDESPEIWAEEILKL 328 (358)
T ss_pred CHHHHHHhcCEEEecccccCCCHHHHHHHHhCCCE-EEEcCC--chhhhhcc-CccEEeCCCCHHHHHHHHHHH
Confidence 46788999999999987777788999999999955 455532 22333333 334445555555665555544
No 58
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=90.60 E-value=0.44 Score=40.87 Aligned_cols=81 Identities=14% Similarity=0.162 Sum_probs=49.1
Q ss_pred EEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEc-CCChhhHHHHHcCCCHHHHHHHHHHHH-hh
Q 006399 536 CICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQ-EKDIPNLRNILLSIPEERYLAMQSRVK-MV 613 (647)
Q Consensus 536 CL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ip-e~dI~~L~~iL~sIs~e~i~~Mr~~l~-~v 613 (647)
||-|.-..-.+.|++|++.+||+.|.-.. ..+.+.+++..-.+.+. .+++.+....|.+ .++++.+|.++.. .|
T Consensus 2 ~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~---~~~~~~~~~~~~~~~~~~~~el~~~i~~ll~-~~~~~~~ia~~a~~~v 77 (92)
T PF13524_consen 2 NLNPSRSDGPNMRIFEAMACGTPVISDDS---PGLREIFEDGEHIITYNDPEELAEKIEYLLE-NPEERRRIAKNARERV 77 (92)
T ss_pred EeeCCCCCCCchHHHHHHHCCCeEEECCh---HHHHHHcCCCCeEEEECCHHHHHHHHHHHHC-CHHHHHHHHHHHHHHH
Confidence 34443333356899999999996655433 23334466776666665 3344443333333 6788888888764 46
Q ss_pred hheeEec
Q 006399 614 QKHFLWH 620 (647)
Q Consensus 614 q~~Flw~ 620 (647)
+.++.|.
T Consensus 78 ~~~~t~~ 84 (92)
T PF13524_consen 78 LKRHTWE 84 (92)
T ss_pred HHhCCHH
Confidence 6676665
No 59
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=89.85 E-value=0.33 Score=56.40 Aligned_cols=111 Identities=13% Similarity=0.257 Sum_probs=73.3
Q ss_pred hhhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCC--CCCCC-CCCceEEEEcCC-------ChhhHH
Q 006399 523 KRIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPP--FFEVL-NWEAFSVFVQEK-------DIPNLR 592 (647)
Q Consensus 523 ~~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LP--FsdVL-DWs~fSV~Ipe~-------dI~~L~ 592 (647)
...|.+.++.+..++.|.-++++..-.+||+++| +|||.++.--++ -.+++ +-....|.|... .+.+|.
T Consensus 465 g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G-~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La 543 (590)
T cd03793 465 GLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG-IPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLT 543 (590)
T ss_pred CcchHHHhhhceEEEeccccCCCCcHHHHHHHcC-CCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHHH
Confidence 3579999999999999999999999999999999 599999864331 01333 333566777632 233444
Q ss_pred HHHcC---CCHHHHHHHHHHHHhhhheeEeccCCCCc-cHHHHHHH
Q 006399 593 NILLS---IPEERYLAMQSRVKMVQKHFLWHKKPKKY-DIFHMVLH 634 (647)
Q Consensus 593 ~iL~s---Is~e~i~~Mr~~l~~vq~~Flw~~~p~~~-DaFhmiL~ 634 (647)
+.|.. .+..+....|.+-.++...|.|+.-...| .|.+++|+
T Consensus 544 ~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al~ 589 (590)
T cd03793 544 QYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLALS 589 (590)
T ss_pred HHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 44443 34444444444444788889998754433 56666553
No 60
>PHA01633 putative glycosyl transferase group 1
Probab=89.75 E-value=0.52 Score=51.28 Aligned_cols=94 Identities=16% Similarity=0.203 Sum_probs=59.6
Q ss_pred hhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCC------------------ceEEEEcC
Q 006399 524 RIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWE------------------AFSVFVQE 585 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs------------------~fSV~Ipe 585 (647)
.+..+.++.|.+.++|.-.+....-++|||++|| |||.++-- |..|+..+. .....++.
T Consensus 215 ~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~-PVVas~~~--~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~ 291 (335)
T PHA01633 215 EYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGT-PVIHQLMP--PLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHK 291 (335)
T ss_pred HHHHHHHHhCCEEEECCccccCCHHHHHHHHcCC-CEEEccCC--CceeecCCccceeeCCCCHHHhcCcccCceeeecC
Confidence 4567889999999999888888888999999999 99998753 444544431 12223555
Q ss_pred CChhhHHHHHcCC---CHHHHHHHHHHHHhhhheeEeccC
Q 006399 586 KDIPNLRNILLSI---PEERYLAMQSRVKMVQKHFLWHKK 622 (647)
Q Consensus 586 ~dI~~L~~iL~sI---s~e~i~~Mr~~l~~vq~~Flw~~~ 622 (647)
.+...+.+.|+.. ++.+. +.++.++..+.|-|+..
T Consensus 292 ~d~~~la~ai~~~~~~~~~~~--~~~~~~~~a~~f~~~~~ 329 (335)
T PHA01633 292 FQIEDMANAIILAFELQDREE--RSMKLKELAKKYDIRNL 329 (335)
T ss_pred CCHHHHHHHHHHHHhccChhh--hhHHHHHHHHhcCHHHH
Confidence 5655555444322 22222 23344556677777643
No 61
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=89.72 E-value=0.51 Score=52.92 Aligned_cols=95 Identities=17% Similarity=0.134 Sum_probs=67.1
Q ss_pred hhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCC------CceEEEEcCCChhhHHHHHcC
Q 006399 524 RIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNW------EAFSVFVQEKDIPNLRNILLS 597 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDW------s~fSV~Ipe~dI~~L~~iL~s 597 (647)
.+..+.|..+..++.|.-.+....-++|||++|| |||.+|.- ...+++.= ....+.++..+...+.+.+..
T Consensus 362 ~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~-PVVatd~g--~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ 438 (475)
T cd03813 362 QNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGI-PVVATDVG--SCRELIEGADDEALGPAGEVVPPADPEALARAILR 438 (475)
T ss_pred ccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCC-CEEECCCC--ChHHHhcCCcccccCCceEEECCCCHHHHHHHHHH
Confidence 4567788999999998755555678999999999 88887742 23344332 347788888888776666555
Q ss_pred C--CHHHHHHHHHHHHh-hhheeEecc
Q 006399 598 I--PEERYLAMQSRVKM-VQKHFLWHK 621 (647)
Q Consensus 598 I--s~e~i~~Mr~~l~~-vq~~Flw~~ 621 (647)
+ .++...+|.++.++ +++.|.|+.
T Consensus 439 ll~~~~~~~~~~~~a~~~v~~~~s~~~ 465 (475)
T cd03813 439 LLKDPELRRAMGEAGRKRVERYYTLER 465 (475)
T ss_pred HhcCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 4 46778888877664 666666653
No 62
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=89.45 E-value=1.6 Score=50.73 Aligned_cols=94 Identities=14% Similarity=0.095 Sum_probs=59.8
Q ss_pred hHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHH---cCCCH-
Q 006399 525 IYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNIL---LSIPE- 600 (647)
Q Consensus 525 ~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL---~sIs~- 600 (647)
+..+.|..+..++.|.-++....-++|||.+|| |||.++.--. .++|.=..-.+.++..+...+.+.+ .++..
T Consensus 465 Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~Gl-PVVATdvGG~--~EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~l 541 (578)
T PRK15490 465 DVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGV-PVISTPAGGS--AECFIEGVSGFILDDAQTVNLDQACRYAEKLVNL 541 (578)
T ss_pred hHHHHHHhCCEEEEcccccCccHHHHHHHHhCC-CEEEeCCCCc--HHHcccCCcEEEECCCChhhHHHHHHHHHHHHHH
Confidence 456778999999999877777889999999999 9998885332 3555445666777777654433222 22111
Q ss_pred -HHHHHHHHHHH-hhhheeEecc
Q 006399 601 -ERYLAMQSRVK-MVQKHFLWHK 621 (647)
Q Consensus 601 -e~i~~Mr~~l~-~vq~~Flw~~ 621 (647)
+....|.++.+ .+..+|-|+.
T Consensus 542 l~~~~~mg~~ARe~V~e~FS~e~ 564 (578)
T PRK15490 542 WRSRTGICQQTQSFLQERFTVEH 564 (578)
T ss_pred HHHHHHHHHHHHHHHHhhCCHHH
Confidence 12223434433 3667777764
No 63
>PHA01630 putative group 1 glycosyl transferase
Probab=87.59 E-value=0.95 Score=48.81 Aligned_cols=95 Identities=11% Similarity=0.102 Sum_probs=57.6
Q ss_pred hhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCC--------------------ceEEEE
Q 006399 524 RIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWE--------------------AFSVFV 583 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs--------------------~fSV~I 583 (647)
.+..+.++.+..++.|.-++....-++|||++|| |||.+|.- ...|++.=. .+.+.+
T Consensus 201 ~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~-PVIas~~g--g~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v 277 (331)
T PHA01630 201 DDIYSLFAGCDILFYPVRGGAFEIPVIEALALGL-DVVVTEKG--AWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFL 277 (331)
T ss_pred HHHHHHHHhCCEEEECCccccCChHHHHHHHcCC-CEEEeCCC--CchhhccCCCceEEeeecccccccccCCccccccc
Confidence 4567889999999999877766777999999998 56666632 233333222 223333
Q ss_pred cCCChh---hHHHHHcCCCHHHHH-HHHHHHHhhhheeEecc
Q 006399 584 QEKDIP---NLRNILLSIPEERYL-AMQSRVKMVQKHFLWHK 621 (647)
Q Consensus 584 pe~dI~---~L~~iL~sIs~e~i~-~Mr~~l~~vq~~Flw~~ 621 (647)
+.++-. .+..+|....+++.. .+.++...+.+.|-|+.
T Consensus 278 ~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ 319 (331)
T PHA01630 278 DPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNA 319 (331)
T ss_pred CCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 333222 344555544334444 44555556777888774
No 64
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=87.45 E-value=1 Score=55.62 Aligned_cols=93 Identities=13% Similarity=0.131 Sum_probs=67.5
Q ss_pred HHhhccc----eEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcCC--CH
Q 006399 527 REHMKSS----KYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSI--PE 600 (647)
Q Consensus 527 ~e~m~~S----kFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sI--s~ 600 (647)
.+.++.+ ..+++|.=++....-++|||++|| |||.++.- ...+++.-..-.+.++..+...|.+.|..+ .+
T Consensus 562 p~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGl-PVVASdvG--G~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~Dp 638 (1050)
T TIGR02468 562 PDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL-PMVATKNG--GPVDIHRVLDNGLLVDPHDQQAIADALLKLVADK 638 (1050)
T ss_pred HHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCC-CEEEeCCC--CcHHHhccCCcEEEECCCCHHHHHHHHHHHhhCH
Confidence 4445444 366668777777788999999995 99999853 344666666678889988888777666554 46
Q ss_pred HHHHHHHHHHHhhhheeEeccC
Q 006399 601 ERYLAMQSRVKMVQKHFLWHKK 622 (647)
Q Consensus 601 e~i~~Mr~~l~~vq~~Flw~~~ 622 (647)
+...+|.++..+..+.|-|..-
T Consensus 639 elr~~m~~~gr~~v~~FSWe~i 660 (1050)
T TIGR02468 639 QLWAECRQNGLKNIHLFSWPEH 660 (1050)
T ss_pred HHHHHHHHHHHHHHHHCCHHHH
Confidence 6778898887765567888864
No 65
>PLN02939 transferase, transferring glycosyl groups
Probab=84.91 E-value=1.5 Score=53.86 Aligned_cols=102 Identities=15% Similarity=0.228 Sum_probs=67.4
Q ss_pred HHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCC--------ceEEEEcCCChhhHHHHHcC-
Q 006399 527 REHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWE--------AFSVFVQEKDIPNLRNILLS- 597 (647)
Q Consensus 527 ~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs--------~fSV~Ipe~dI~~L~~iL~s- 597 (647)
...++.|.++++|.=+++...-.+|||++||+||+...+= ++ +-|.|++ .-.+.++..+...+...|..
T Consensus 851 h~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGG-L~-DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rA 928 (977)
T PLN02939 851 HSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGG-LN-DSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERA 928 (977)
T ss_pred HHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCC-Cc-ceeecCCccccccCCCceEEecCCCHHHHHHHHHHH
Confidence 3578999999999988988899999999999999754321 11 1223332 34566777777665544432
Q ss_pred ---C--CHHHHHHHHHHHHhhhheeEeccCCCCc-cHHHHH
Q 006399 598 ---I--PEERYLAMQSRVKMVQKHFLWHKKPKKY-DIFHMV 632 (647)
Q Consensus 598 ---I--s~e~i~~Mr~~l~~vq~~Flw~~~p~~~-DaFhmi 632 (647)
+ .++.+.+|+++. +...|-|+.....| +++.-+
T Consensus 929 L~~~~~dpe~~~~L~~~a--m~~dFSWe~~A~qYeeLY~~l 967 (977)
T PLN02939 929 FNYYKRKPEVWKQLVQKD--MNIDFSWDSSASQYEELYQRA 967 (977)
T ss_pred HHHhccCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHH
Confidence 2 477788887743 45778888765443 334433
No 66
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=80.82 E-value=1.5 Score=47.32 Aligned_cols=67 Identities=13% Similarity=0.126 Sum_probs=41.8
Q ss_pred hhHHHhhccceEEEEecCCC-----CCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcC
Q 006399 524 RIYREHMKSSKYCICARGYE-----VHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLS 597 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~~-----~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~s 597 (647)
.+..+.|+.+..|++|.-.. .....++|+|++|| |||.++ +.++.....-.+.+ ..+..++.+.|..
T Consensus 265 ~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~-PVVat~-----~~~~~~~~~~~~~~-~~d~~~~~~ai~~ 336 (373)
T cd04950 265 KELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGK-PVVATP-----LPEVRRYEDEVVLI-ADDPEEFVAAIEK 336 (373)
T ss_pred HHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCC-CEEecC-----cHHHHhhcCcEEEe-CCCHHHHHHHHHH
Confidence 45778899999999995321 22357999999997 777654 33444433333334 3455555544444
No 67
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=79.88 E-value=7.7 Score=46.39 Aligned_cols=92 Identities=11% Similarity=0.052 Sum_probs=58.7
Q ss_pred hHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCCh------hhHHHHHcCC
Q 006399 525 IYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDI------PNLRNILLSI 598 (647)
Q Consensus 525 ~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI------~~L~~iL~sI 598 (647)
+....|..+...+.|.-++....-++|||.+|| |||.++.-- ..++|.=..-.+.++..+. ..|.++|...
T Consensus 584 dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~-PVVat~~gG--~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l 660 (694)
T PRK15179 584 RVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGV-PVVTTLAGG--AGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMC 660 (694)
T ss_pred hHHHHHHhcCEEEeccccccchHHHHHHHHcCC-eEEEECCCC--hHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhCh
Confidence 456778888888888777777889999999996 888877532 3355654556667776553 2344444443
Q ss_pred CHHHHHHHHHHHH-hhhheeEecc
Q 006399 599 PEERYLAMQSRVK-MVQKHFLWHK 621 (647)
Q Consensus 599 s~e~i~~Mr~~l~-~vq~~Flw~~ 621 (647)
... ..|+++.+ .++.+|-|+.
T Consensus 661 ~~~--~~l~~~ar~~a~~~FS~~~ 682 (694)
T PRK15179 661 AAD--PGIARKAADWASARFSLNQ 682 (694)
T ss_pred hcc--HHHHHHHHHHHHHhCCHHH
Confidence 221 23444444 3556777764
No 68
>PLN00142 sucrose synthase
Probab=78.35 E-value=6.1 Score=47.98 Aligned_cols=94 Identities=12% Similarity=0.093 Sum_probs=64.6
Q ss_pred Hhhcc-ceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcC------CCH
Q 006399 528 EHMKS-SKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLS------IPE 600 (647)
Q Consensus 528 e~m~~-SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~s------Is~ 600 (647)
..+.. +..+++|.=++....-++|||++|| |||.++.--+ .++|.-..-.+.|+..+...+.+.|.. -.+
T Consensus 661 r~iadaaDVfVlPS~~EgFGLvvLEAMA~Gl-PVVATdvGG~--~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp 737 (815)
T PLN00142 661 RYIADTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCQGGP--AEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDP 737 (815)
T ss_pred HHHHhhCCEEEeCCcccCCCHHHHHHHHcCC-CEEEcCCCCH--HHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCH
Confidence 33443 3456778777777888999999997 7777775332 245555667788888887765554432 257
Q ss_pred HHHHHHHHHH-HhhhheeEeccCCC
Q 006399 601 ERYLAMQSRV-KMVQKHFLWHKKPK 624 (647)
Q Consensus 601 e~i~~Mr~~l-~~vq~~Flw~~~p~ 624 (647)
+...+|.++. .++..+|-|+....
T Consensus 738 ~lr~~mg~~Ar~rv~e~FSWe~~A~ 762 (815)
T PLN00142 738 SYWNKISDAGLQRIYECYTWKIYAE 762 (815)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 7778888774 56778999987543
No 69
>PLN02316 synthase/transferase
Probab=76.13 E-value=4.3 Score=50.41 Aligned_cols=96 Identities=11% Similarity=0.156 Sum_probs=61.6
Q ss_pred HhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCC------------ceEEEEcCCChhhHHH--
Q 006399 528 EHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWE------------AFSVFVQEKDIPNLRN-- 593 (647)
Q Consensus 528 e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs------------~fSV~Ipe~dI~~L~~-- 593 (647)
..++.+.++|+|.=+++...-.+|||++||+||+-..+ =+| +-|.|++ .--+.++..+...|..
T Consensus 915 ~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vG-GL~-DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL 992 (1036)
T PLN02316 915 LIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTG-GLF-DTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYAL 992 (1036)
T ss_pred HHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCC-CcH-hhccccccccccccccccCCceEEeCCCCHHHHHHHH
Confidence 57899999999998999999999999999999995432 121 1123442 3466778877765443
Q ss_pred --HHcCCCHHHHHHHHHHHH-hhhheeEeccCCCCc
Q 006399 594 --ILLSIPEERYLAMQSRVK-MVQKHFLWHKKPKKY 626 (647)
Q Consensus 594 --iL~sIs~e~i~~Mr~~l~-~vq~~Flw~~~p~~~ 626 (647)
+|.... +.-..|++..+ .+.+.|-|+.....|
T Consensus 993 ~raL~~~~-~~~~~~~~~~r~~m~~dFSW~~~A~~Y 1027 (1036)
T PLN02316 993 NRAISAWY-DGRDWFNSLCKRVMEQDWSWNRPALDY 1027 (1036)
T ss_pred HHHHhhhh-hhHHHHHHHHHHHHHhhCCHHHHHHHH
Confidence 333321 22222333333 346789998765444
No 70
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=74.93 E-value=3.2 Score=37.30 Aligned_cols=76 Identities=16% Similarity=0.170 Sum_probs=43.6
Q ss_pred CeEEecCCCCCCcchhhHHHhhccceEEEEecC-CCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCC
Q 006399 509 DMKIFGPMPHDVEGKRIYREHMKSSKYCICARG-YEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKD 587 (647)
Q Consensus 509 dv~I~~~c~~~~~g~~~Y~e~m~~SkFCL~P~G-~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~d 587 (647)
.+.+.+.. .++.+.|+++.++++|.- +...+..++|++.+||-+|. ++. ++.+.+.-....+.+ ..+
T Consensus 54 ~v~~~g~~-------~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~-~~~---~~~~~~~~~~~~~~~-~~~ 121 (135)
T PF13692_consen 54 NVRFHGFV-------EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIA-SDN---GAEGIVEEDGCGVLV-AND 121 (135)
T ss_dssp TEEEE-S--------HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEE-EHH---HCHCHS---SEEEE--TT-
T ss_pred CEEEcCCH-------HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEE-CCc---chhhheeecCCeEEE-CCC
Confidence 55555542 368999999999999974 23356899999999985554 544 455544435666666 666
Q ss_pred hhhHHHHHc
Q 006399 588 IPNLRNILL 596 (647)
Q Consensus 588 I~~L~~iL~ 596 (647)
..++.+.|.
T Consensus 122 ~~~l~~~i~ 130 (135)
T PF13692_consen 122 PEELAEAIE 130 (135)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666665554
No 71
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=73.23 E-value=15 Score=34.58 Aligned_cols=78 Identities=15% Similarity=0.044 Sum_probs=47.6
Q ss_pred ceEEEEeeccCCcch-HHHHHHhhcCCCCeEEecCCCCCCcchhhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEE
Q 006399 482 STLAFFAGRMHGYLR-PILLNFWENKVDDMKIFGPMPHDVEGKRIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPV 560 (647)
Q Consensus 482 ~~LafFaG~~~G~iR-~~L~~~w~n~~~dv~I~~~c~~~~~g~~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPV 560 (647)
++-+.+.|....... ..+.... .....+.+.+..+. ...+...+..|..+++|...+..+..++|||.+||..
T Consensus 135 ~~~~~i~G~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~----~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pv- 208 (229)
T cd01635 135 DLKLVIAGDGPEREYLEELLAAL-LLLDRVIFLGGLDP----EELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPV- 208 (229)
T ss_pred CeEEEEEeCCCChHHHHHHHHhc-CCcccEEEeCCCCc----HHHHHHHhhcCCEEEecccccCcChHHHHHHhCCCCE-
Confidence 466777776432211 1111111 22345666654321 2456666667999999998888889999999998755
Q ss_pred EecCC
Q 006399 561 IISDN 565 (647)
Q Consensus 561 IIsD~ 565 (647)
|.++.
T Consensus 209 i~s~~ 213 (229)
T cd01635 209 IATDV 213 (229)
T ss_pred EEcCC
Confidence 55553
No 72
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=72.76 E-value=24 Score=40.51 Aligned_cols=94 Identities=15% Similarity=0.063 Sum_probs=59.9
Q ss_pred hHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCC-ccCCCCCCCCCCceEEEEcC----C---C-hhhHHHHH
Q 006399 525 IYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDN-YVPPFFEVLNWEAFSVFVQE----K---D-IPNLRNIL 595 (647)
Q Consensus 525 ~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~-~~LPFsdVLDWs~fSV~Ipe----~---d-I~~L~~iL 595 (647)
+..+.+..+.-+++|.=.+....-++|||++|| |||.+|- +-. .++|.=..-.+.++. . + +..|.+.+
T Consensus 385 ~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~-PVI~~dv~~G~--~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I 461 (500)
T TIGR02918 385 NLSEVYKDYELYLSASTSEGFGLTLMEAVGSGL-GMIGFDVNYGN--PTFIEDNKNGYLIPIDEEEDDEDQIITALAEKI 461 (500)
T ss_pred CHHHHHHhCCEEEEcCccccccHHHHHHHHhCC-CEEEecCCCCC--HHHccCCCCEEEEeCCccccchhHHHHHHHHHH
Confidence 345677888888888766666788999999997 7777762 222 244543444555552 2 2 33343322
Q ss_pred cC-CCHHHHHHHHHHHHhhhheeEecc
Q 006399 596 LS-IPEERYLAMQSRVKMVQKHFLWHK 621 (647)
Q Consensus 596 ~s-Is~e~i~~Mr~~l~~vq~~Flw~~ 621 (647)
.. +.++.+.+|.++..+..+.|.|..
T Consensus 462 ~~ll~~~~~~~~~~~a~~~a~~fs~~~ 488 (500)
T TIGR02918 462 VEYFNSNDIDAFHEYSYQIAEGFLTAN 488 (500)
T ss_pred HHHhChHHHHHHHHHHHHHHHhcCHHH
Confidence 22 246678889888888777777763
No 73
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=70.90 E-value=7.3 Score=40.75 Aligned_cols=82 Identities=16% Similarity=0.134 Sum_probs=50.9
Q ss_pred hHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCC-----CCCCCCceEEEEcCCC--hhhHHHHHcC
Q 006399 525 IYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFF-----EVLNWEAFSVFVQEKD--IPNLRNILLS 597 (647)
Q Consensus 525 ~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFs-----dVLDWs~fSV~Ipe~d--I~~L~~iL~s 597 (647)
++.+.|..+..|+.+.| ..-++||+.+|| |||+.+.-.-+-. +.+......+.++..+ ...|.+.|+.
T Consensus 243 ~~~~~l~~ad~~v~~~g----~~~l~Ea~~~g~-Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ 317 (348)
T TIGR01133 243 NMAAAYAAADLVISRAG----ASTVAELAAAGV-PAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLK 317 (348)
T ss_pred CHHHHHHhCCEEEECCC----hhHHHHHHHcCC-CEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHH
Confidence 67899999999999876 245899999996 6666532100000 1343455666676654 5555444443
Q ss_pred C--CHHHHHHHHHHHH
Q 006399 598 I--PEERYLAMQSRVK 611 (647)
Q Consensus 598 I--s~e~i~~Mr~~l~ 611 (647)
+ .++...+|.++.+
T Consensus 318 ll~~~~~~~~~~~~~~ 333 (348)
T TIGR01133 318 LLLDPANLEAMAEAAR 333 (348)
T ss_pred HHcCHHHHHHHHHHHH
Confidence 2 4666777877654
No 74
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=70.18 E-value=12 Score=41.00 Aligned_cols=83 Identities=22% Similarity=0.185 Sum_probs=51.3
Q ss_pred hHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCC-----CCceEEEEcCCChhhHHHHHcCC-
Q 006399 525 IYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLN-----WEAFSVFVQEKDIPNLRNILLSI- 598 (647)
Q Consensus 525 ~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLD-----Ws~fSV~Ipe~dI~~L~~iL~sI- 598 (647)
+..+.|+.|.+++..+|- .-+.||+.+|+ |||+.+.. |=++..+ =..+++.+. +..++.+.|..+
T Consensus 266 ~~~~~~~~aDl~I~k~gg----~tl~EA~a~G~-PvI~~~~~--pgqe~~N~~~~~~~G~g~~~~--~~~~l~~~i~~ll 336 (391)
T PRK13608 266 HMNEWMASSQLMITKPGG----ITISEGLARCI-PMIFLNPA--PGQELENALYFEEKGFGKIAD--TPEEAIKIVASLT 336 (391)
T ss_pred hHHHHHHhhhEEEeCCch----HHHHHHHHhCC-CEEECCCC--CCcchhHHHHHHhCCcEEEeC--CHHHHHHHHHHHh
Confidence 467889999999885442 34899999996 88887642 3333221 223444432 444444444333
Q ss_pred -CHHHHHHHHHHHHhhhhe
Q 006399 599 -PEERYLAMQSRVKMVQKH 616 (647)
Q Consensus 599 -s~e~i~~Mr~~l~~vq~~ 616 (647)
.++++.+|+++..+..+.
T Consensus 337 ~~~~~~~~m~~~~~~~~~~ 355 (391)
T PRK13608 337 NGNEQLTNMISTMEQDKIK 355 (391)
T ss_pred cCHHHHHHHHHHHHHhcCC
Confidence 577888999887765443
No 75
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=69.34 E-value=25 Score=39.04 Aligned_cols=129 Identities=14% Similarity=0.099 Sum_probs=70.6
Q ss_pred eEEEEeeccCCcchHHH---HHHhh---cCCCCeEEecCCCCCCcchhhHHHhhccceEEEEecCCCCCCchHHHHhhcC
Q 006399 483 TLAFFAGRMHGYLRPIL---LNFWE---NKVDDMKIFGPMPHDVEGKRIYREHMKSSKYCICARGYEVHTPRVVEAIFYE 556 (647)
Q Consensus 483 ~LafFaG~~~G~iR~~L---~~~w~---n~~~dv~I~~~c~~~~~g~~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aG 556 (647)
+=+.++|++++.-.... ++.|. +-+.++.+....| -.+..++|.++++.+.-.=.+-....++|+|++|
T Consensus 306 iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F~~N~P-----y~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAG 380 (465)
T KOG1387|consen 306 IKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQFEKNVP-----YEKLVELLGKATIGVHTMWNEHFGISVVEYMAAG 380 (465)
T ss_pred ceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEEEecCC-----HHHHHHHhccceeehhhhhhhhcchhHHHHHhcC
Confidence 34667887765422222 22221 1233454443333 1346788999999998766665667899999999
Q ss_pred cEEEEecCCccCCCCCCCCCCce-EEEEcCCChhhHHHHHcC--CCHHHHHHHHHHHHhhhhee
Q 006399 557 CVPVIISDNYVPPFFEVLNWEAF-SVFVQEKDIPNLRNILLS--IPEERYLAMQSRVKMVQKHF 617 (647)
Q Consensus 557 CIPVIIsD~~~LPFsdVLDWs~f-SV~Ipe~dI~~L~~iL~s--Is~e~i~~Mr~~l~~vq~~F 617 (647)
.|||.=.-. =+-+.=|++|.-= .=++.+.+......||+- ...++...||++-++--.+|
T Consensus 381 lIpi~h~Sg-GP~lDIV~~~~G~~tGFla~t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RF 443 (465)
T KOG1387|consen 381 LIPIVHNSG-GPLLDIVTPWDGETTGFLAPTDEEYAEAILKIVKLNYDERNMMRRNARKSLARF 443 (465)
T ss_pred ceEEEeCCC-CCceeeeeccCCccceeecCChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHh
Confidence 999874322 1112223566532 223333333333333332 35566777888755444433
No 76
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=69.08 E-value=15 Score=44.70 Aligned_cols=90 Identities=9% Similarity=0.118 Sum_probs=63.9
Q ss_pred ceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcCC------CHHHHHHH
Q 006399 533 SKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSI------PEERYLAM 606 (647)
Q Consensus 533 SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sI------s~e~i~~M 606 (647)
+..+++|+=+++...-++|||++||-+ |.++.==+ .|+|.-..-.+.|+..+...+.+.|..+ .++...+|
T Consensus 644 adVfV~PS~~EpFGLvvLEAMAcGlPV-VAT~~GG~--~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~m 720 (784)
T TIGR02470 644 KGIFVQPALYEAFGLTVLEAMTCGLPT-FATRFGGP--LEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKI 720 (784)
T ss_pred CcEEEECCcccCCCHHHHHHHHcCCCE-EEcCCCCH--HHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 356788888888889999999999854 55553222 2445556677788888887766655432 57778888
Q ss_pred HHHH-HhhhheeEeccCCCC
Q 006399 607 QSRV-KMVQKHFLWHKKPKK 625 (647)
Q Consensus 607 r~~l-~~vq~~Flw~~~p~~ 625 (647)
.++. .++..+|.|.....+
T Consensus 721 s~~a~~rV~~~FSW~~~A~~ 740 (784)
T TIGR02470 721 SQGGLQRIYEKYTWKIYSER 740 (784)
T ss_pred HHHHHHHHHHhCCHHHHHHH
Confidence 8874 467899999986433
No 77
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=68.60 E-value=29 Score=37.63 Aligned_cols=78 Identities=19% Similarity=0.259 Sum_probs=48.5
Q ss_pred hHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCC------CCCCceEEEEcCCChhhHHHHHcCC
Q 006399 525 IYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEV------LNWEAFSVFVQEKDIPNLRNILLSI 598 (647)
Q Consensus 525 ~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdV------LDWs~fSV~Ipe~dI~~L~~iL~sI 598 (647)
+..+.|..|..++.++|- .-+.|||.+|| |||+.+. .|-.++ ++ ..+.+.+ .+...|.+.+..+
T Consensus 275 ~~~~l~~aaDv~V~~~g~----~ti~EAma~g~-PvI~~~~--~pgqe~gn~~~i~~-~g~g~~~--~~~~~la~~i~~l 344 (382)
T PLN02605 275 NMEEWMGACDCIITKAGP----GTIAEALIRGL-PIILNGY--IPGQEEGNVPYVVD-NGFGAFS--ESPKEIARIVAEW 344 (382)
T ss_pred cHHHHHHhCCEEEECCCc----chHHHHHHcCC-CEEEecC--CCccchhhHHHHHh-CCceeec--CCHHHHHHHHHHH
Confidence 467889999999987762 24899999997 7777663 233332 22 3444443 4544444444433
Q ss_pred ---CHHHHHHHHHHHHh
Q 006399 599 ---PEERYLAMQSRVKM 612 (647)
Q Consensus 599 ---s~e~i~~Mr~~l~~ 612 (647)
.++...+|+++.++
T Consensus 345 l~~~~~~~~~m~~~~~~ 361 (382)
T PLN02605 345 FGDKSDELEAMSENALK 361 (382)
T ss_pred HcCCHHHHHHHHHHHHH
Confidence 26677778776543
No 78
>PLN02275 transferase, transferring glycosyl groups
Probab=64.89 E-value=36 Score=36.74 Aligned_cols=93 Identities=11% Similarity=0.041 Sum_probs=57.6
Q ss_pred ceEEEEeeccCCcchHHHHHHhhcC-CCCeEEecC-CCCCCcchhhHHHhhccceEEEEecCC---CCCCchHHHHhhcC
Q 006399 482 STLAFFAGRMHGYLRPILLNFWENK-VDDMKIFGP-MPHDVEGKRIYREHMKSSKYCICARGY---EVHTPRVVEAIFYE 556 (647)
Q Consensus 482 ~~LafFaG~~~G~iR~~L~~~w~n~-~~dv~I~~~-c~~~~~g~~~Y~e~m~~SkFCL~P~G~---~~~S~Rl~EAL~aG 556 (647)
.+-+.+.|. |..|..|.+..+.. -+++.+++. .+ ..++.+.|+.+..|++|... +....-++|||++|
T Consensus 261 ~i~l~ivG~--G~~~~~l~~~~~~~~l~~v~~~~~~~~-----~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G 333 (371)
T PLN02275 261 RLLFIITGK--GPQKAMYEEKISRLNLRHVAFRTMWLE-----AEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCG 333 (371)
T ss_pred CeEEEEEeC--CCCHHHHHHHHHHcCCCceEEEcCCCC-----HHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCC
Confidence 467778885 66777665554322 234655543 22 35788999999999876321 11245799999999
Q ss_pred cEEEEecCCccCCCCCCCCCCceEEEEc
Q 006399 557 CVPVIISDNYVPPFFEVLNWEAFSVFVQ 584 (647)
Q Consensus 557 CIPVIIsD~~~LPFsdVLDWs~fSV~Ip 584 (647)
| |||.++.-- ..+++.=....+.++
T Consensus 334 ~-PVVa~~~gg--~~eiv~~g~~G~lv~ 358 (371)
T PLN02275 334 L-PVCAVSYSC--IGELVKDGKNGLLFS 358 (371)
T ss_pred C-CEEEecCCC--hHHHccCCCCeEEEC
Confidence 7 888776322 335554444555555
No 79
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=63.68 E-value=12 Score=36.64 Aligned_cols=94 Identities=21% Similarity=0.202 Sum_probs=51.4
Q ss_pred hHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcCCC--HHH
Q 006399 525 IYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSIP--EER 602 (647)
Q Consensus 525 ~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sIs--~e~ 602 (647)
.....++.+...+.|.-.+....-++||+.+| +|||.++.- -..+++.=....+.++..+...+...+..+- .+.
T Consensus 269 ~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g-~pvi~~~~~--~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~ 345 (381)
T COG0438 269 ELAELLASADVFVLPSLSEGFGLVLLEAMAAG-TPVIASDVG--GIPEVVEDGETGLLVPPGDVEELADALEQLLEDPEL 345 (381)
T ss_pred HHHHHHHhCCEEEeccccccchHHHHHHHhcC-CcEEECCCC--ChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCHHH
Confidence 45667888999999954433334499999999 999888753 1222332221222344334554444443332 133
Q ss_pred HHHHHH-HHHhhhheeEecc
Q 006399 603 YLAMQS-RVKMVQKHFLWHK 621 (647)
Q Consensus 603 i~~Mr~-~l~~vq~~Flw~~ 621 (647)
..++.+ ....+..+|.|..
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~ 365 (381)
T COG0438 346 REELGEAARERVEEEFSWER 365 (381)
T ss_pred HHHHHHHHHHHHHHhcCHHH
Confidence 444444 2333445666663
No 80
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=61.71 E-value=8.9 Score=43.23 Aligned_cols=89 Identities=10% Similarity=0.074 Sum_probs=60.7
Q ss_pred hhhHHHhhccceEEEEecCCCCCCchHHHHhhcCcE---EEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHc---
Q 006399 523 KRIYREHMKSSKYCICARGYEVHTPRVVEAIFYECV---PVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILL--- 596 (647)
Q Consensus 523 ~~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCI---PVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~--- 596 (647)
..+..+.++.+.-++.|+-.+....-..|||.+||= |||+++.-=.+ +. ..-.+.|+..+...+.+.|.
T Consensus 351 ~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~--~~---~~~g~lv~p~d~~~la~ai~~~l 425 (460)
T cd03788 351 REELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAA--EE---LSGALLVNPYDIDEVADAIHRAL 425 (460)
T ss_pred HHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccch--hh---cCCCEEECCCCHHHHHHHHHHHH
Confidence 356778899999999987666566778999999996 69998743221 11 23467888888877665553
Q ss_pred CCCHHHHHHHHHHHHhhhhe
Q 006399 597 SIPEERYLAMQSRVKMVQKH 616 (647)
Q Consensus 597 sIs~e~i~~Mr~~l~~vq~~ 616 (647)
..++++..+|.++.++....
T Consensus 426 ~~~~~e~~~~~~~~~~~v~~ 445 (460)
T cd03788 426 TMPLEERRERHRKLREYVRT 445 (460)
T ss_pred cCCHHHHHHHHHHHHHHHHh
Confidence 34666666666655554443
No 81
>PRK10125 putative glycosyl transferase; Provisional
Probab=59.57 E-value=22 Score=39.38 Aligned_cols=67 Identities=18% Similarity=0.157 Sum_probs=52.3
Q ss_pred hhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCCCCCCceEEEEcCCChhhHHHH
Q 006399 524 RIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNI 594 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~i 594 (647)
....+.++.+...+.|.-++....-++|||++|| |||.+|-=-. .|+++=. -.+.++..|+..|.+.
T Consensus 298 ~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~-PVVat~~gG~--~Eiv~~~-~G~lv~~~d~~~La~~ 364 (405)
T PRK10125 298 RKLMSALNQMDALVFSSRVDNYPLILCEALSIGV-PVIATHSDAA--REVLQKS-GGKTVSEEEVLQLAQL 364 (405)
T ss_pred HHHHHHHHhCCEEEECCccccCcCHHHHHHHcCC-CEEEeCCCCh--HHhEeCC-cEEEECCCCHHHHHhc
Confidence 4567888999999999888877888999999995 8888875433 3566533 5888999998887764
No 82
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=56.31 E-value=71 Score=33.38 Aligned_cols=83 Identities=18% Similarity=0.153 Sum_probs=51.9
Q ss_pred hhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCC-c------cCCCCCCCCCCceEEEEcCC--ChhhHHHH
Q 006399 524 RIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDN-Y------VPPFFEVLNWEAFSVFVQEK--DIPNLRNI 594 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~-~------~LPFsdVLDWs~fSV~Ipe~--dI~~L~~i 594 (647)
.++.+.|..+.+.+++.|. .-++|||.+|+- ||+.+. . ..+.+ .|......+.++.. +...|.+.
T Consensus 244 ~~~~~~l~~ad~~v~~sg~----~t~~Eam~~G~P-vv~~~~~~~~~~~~~~~~~-~l~~~g~g~~v~~~~~~~~~l~~~ 317 (350)
T cd03785 244 DDMAAAYAAADLVISRAGA----STVAELAALGLP-AILIPLPYAADDHQTANAR-ALVKAGAAVLIPQEELTPERLAAA 317 (350)
T ss_pred hhHHHHHHhcCEEEECCCH----hHHHHHHHhCCC-EEEeecCCCCCCcHHHhHH-HHHhCCCEEEEecCCCCHHHHHHH
Confidence 3678899999999988762 348999999985 444432 1 01112 23334566777765 66666555
Q ss_pred HcCC--CHHHHHHHHHHHHh
Q 006399 595 LLSI--PEERYLAMQSRVKM 612 (647)
Q Consensus 595 L~sI--s~e~i~~Mr~~l~~ 612 (647)
|+.+ .++.+.+|+++.++
T Consensus 318 i~~ll~~~~~~~~~~~~~~~ 337 (350)
T cd03785 318 LLELLSDPERLKAMAEAARS 337 (350)
T ss_pred HHHHhcCHHHHHHHHHHHHh
Confidence 5444 46677778776543
No 83
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=54.30 E-value=43 Score=35.95 Aligned_cols=80 Identities=19% Similarity=0.216 Sum_probs=45.9
Q ss_pred hHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCC-----CCCCCceEEEEcCCChhhHHHHHcCC-
Q 006399 525 IYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFE-----VLNWEAFSVFVQEKDIPNLRNILLSI- 598 (647)
Q Consensus 525 ~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsd-----VLDWs~fSV~Ipe~dI~~L~~iL~sI- 598 (647)
+..+.|..|...+..+| ..-+.||+.+|| |||+.+.. |-.+ .+.-..+.+.+ .+..+|.+.|..+
T Consensus 266 ~~~~l~~~aD~~v~~~g----g~t~~EA~a~g~-PvI~~~~~--~g~~~~n~~~~~~~G~~~~~--~~~~~l~~~i~~ll 336 (380)
T PRK13609 266 NIDELFRVTSCMITKPG----GITLSEAAALGV-PVILYKPV--PGQEKENAMYFERKGAAVVI--RDDEEVFAKTEALL 336 (380)
T ss_pred hHHHHHHhccEEEeCCC----chHHHHHHHhCC-CEEECCCC--CCcchHHHHHHHhCCcEEEE--CCHHHHHHHHHHHH
Confidence 35688888887665433 234889999997 57775531 1111 12222344433 4445554444433
Q ss_pred -CHHHHHHHHHHHHhh
Q 006399 599 -PEERYLAMQSRVKMV 613 (647)
Q Consensus 599 -s~e~i~~Mr~~l~~v 613 (647)
.++.+.+|+++..++
T Consensus 337 ~~~~~~~~m~~~~~~~ 352 (380)
T PRK13609 337 QDDMKLLQMKEAMKSL 352 (380)
T ss_pred CCHHHHHHHHHHHHHh
Confidence 467788888876553
No 84
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=52.23 E-value=32 Score=39.00 Aligned_cols=83 Identities=13% Similarity=0.112 Sum_probs=56.6
Q ss_pred hhhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEE----EEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcC-
Q 006399 523 KRIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVP----VIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLS- 597 (647)
Q Consensus 523 ~~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIP----VIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~s- 597 (647)
..+....++.+.-|++|+=.+....-..|||++|+ | ||+|+.-=.+ +.|. -++.|+..+...+.+.|..
T Consensus 346 ~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~-P~~g~vVlS~~~G~~--~~l~---~gllVnP~d~~~lA~aI~~a 419 (456)
T TIGR02400 346 REELMALYRAADVGLVTPLRDGMNLVAKEYVAAQD-PKDGVLILSEFAGAA--QELN---GALLVNPYDIDGMADAIARA 419 (456)
T ss_pred HHHHHHHHHhCcEEEECccccccCccHHHHHHhcC-CCCceEEEeCCCCCh--HHhC---CcEEECCCCHHHHHHHHHHH
Confidence 35678889999999998765555677999999996 7 8888743211 2232 3788888888876665533
Q ss_pred --CCHHHHHHHHHHHH
Q 006399 598 --IPEERYLAMQSRVK 611 (647)
Q Consensus 598 --Is~e~i~~Mr~~l~ 611 (647)
+++++..++.++++
T Consensus 420 L~~~~~er~~r~~~~~ 435 (456)
T TIGR02400 420 LTMPLEEREERHRAMM 435 (456)
T ss_pred HcCCHHHHHHHHHHHH
Confidence 46555555444443
No 85
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=50.54 E-value=23 Score=37.49 Aligned_cols=82 Identities=17% Similarity=0.165 Sum_probs=51.1
Q ss_pred hHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCC-----CCCCCCCCceEEEEcCCC--hhhHHHHHcC
Q 006399 525 IYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPP-----FFEVLNWEAFSVFVQEKD--IPNLRNILLS 597 (647)
Q Consensus 525 ~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LP-----FsdVLDWs~fSV~Ipe~d--I~~L~~iL~s 597 (647)
++.+.|..+..+++..|. .-++||+++||--|.+....... ..+.|--....+.++.++ ...|.+.++.
T Consensus 245 ~~~~~~~~~d~~i~~~g~----~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ 320 (357)
T PRK00726 245 DMAAAYAAADLVICRAGA----STVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLE 320 (357)
T ss_pred hHHHHHHhCCEEEECCCH----HHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHH
Confidence 577999999999998762 44899999998555553321111 112232345677787766 4455555544
Q ss_pred C--CHHHHHHHHHHH
Q 006399 598 I--PEERYLAMQSRV 610 (647)
Q Consensus 598 I--s~e~i~~Mr~~l 610 (647)
+ .++...+|+++.
T Consensus 321 ll~~~~~~~~~~~~~ 335 (357)
T PRK00726 321 LLSDPERLEAMAEAA 335 (357)
T ss_pred HHcCHHHHHHHHHHH
Confidence 3 366667787753
No 86
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=48.12 E-value=19 Score=39.46 Aligned_cols=86 Identities=12% Similarity=0.081 Sum_probs=50.4
Q ss_pred hHHHhhccceEEEEecCC-CCCCchHHHHhhcCcEEEEecCCccCCCCCCCC---CCceEEEEcCCChhhHHHHHcCC--
Q 006399 525 IYREHMKSSKYCICARGY-EVHTPRVVEAIFYECVPVIISDNYVPPFFEVLN---WEAFSVFVQEKDIPNLRNILLSI-- 598 (647)
Q Consensus 525 ~Y~e~m~~SkFCL~P~G~-~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdVLD---Ws~fSV~Ipe~dI~~L~~iL~sI-- 598 (647)
+....++.+..|+++... +....-++||+++|| |||.+++.. -|.++.+ -..+.+ +..|...|.+.|..+
T Consensus 312 el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~-PVI~g~~~~-~~~e~~~~~~~~g~~~--~~~d~~~La~~l~~ll~ 387 (425)
T PRK05749 312 ELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGV-PVISGPHTF-NFKEIFERLLQAGAAI--QVEDAEDLAKAVTYLLT 387 (425)
T ss_pred HHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCC-CEEECCCcc-CHHHHHHHHHHCCCeE--EECCHHHHHHHHHHHhc
Confidence 456788889987775432 223445999999997 888776431 1223221 123333 344555555544433
Q ss_pred CHHHHHHHHHHHHhhh
Q 006399 599 PEERYLAMQSRVKMVQ 614 (647)
Q Consensus 599 s~e~i~~Mr~~l~~vq 614 (647)
.++...+|.++.++..
T Consensus 388 ~~~~~~~m~~~a~~~~ 403 (425)
T PRK05749 388 DPDARQAYGEAGVAFL 403 (425)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 4667777877665543
No 87
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=46.92 E-value=1.6e+02 Score=31.04 Aligned_cols=131 Identities=14% Similarity=0.099 Sum_probs=79.7
Q ss_pred CCCceEEEEeeccCCc-chHHHHHHhhcCCC--CeEEecCCCCCCc-------c-hhhHHHhhccceEEEEecCCCCCCc
Q 006399 479 LKRSTLAFFAGRMHGY-LRPILLNFWENKVD--DMKIFGPMPHDVE-------G-KRIYREHMKSSKYCICARGYEVHTP 547 (647)
Q Consensus 479 ~~R~~LafFaG~~~G~-iR~~L~~~w~n~~~--dv~I~~~c~~~~~-------g-~~~Y~e~m~~SkFCL~P~G~~~~S~ 547 (647)
..|.-.++|+|+..|. .|..|++.-.+.+. |+.+...|....+ + ...-.+...+-||=|...|.+ .|.
T Consensus 81 ~~K~~~a~WRG~~~~~~~R~~Lv~~~~~~p~~~da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yKyli~~dG~~-~S~ 159 (256)
T smart00672 81 SDKNAYAYWRGNPTVASERLDLIKCNQSSPELVNARITIQDWPGKCDGEEDAPGFKKSPLEEQCKHKYKINIEGVA-WSV 159 (256)
T ss_pred cccCcCccccCCCCCCcchHHHHHHhcCCcccceeEEEEecCCCCChHHhcccCcCCCCHHHHhhcceEEecCCcc-chh
Confidence 5678899999998876 89988765433322 2344433321001 0 111134456789999999986 678
Q ss_pred hHHHHhhcCcEEEEecCCccCCCCCC-CCCCceEEEEcC--CC--hhhHHHHHcCCCHHHHHHHHHHHHh
Q 006399 548 RVVEAIFYECVPVIISDNYVPPFFEV-LNWEAFSVFVQE--KD--IPNLRNILLSIPEERYLAMQSRVKM 612 (647)
Q Consensus 548 Rl~EAL~aGCIPVIIsD~~~LPFsdV-LDWs~fSV~Ipe--~d--I~~L~~iL~sIs~e~i~~Mr~~l~~ 612 (647)
||.--|.+++|++.....|.-=|.+. .+|.-|. -|.. .+ +.+..+.+++- +++..++-++..+
T Consensus 160 rl~~~l~~~Svvl~~~~~~~~~~~~~L~P~~HYv-Pv~~d~sd~~l~~~i~~~~~~-~~~a~~Ia~~~~~ 227 (256)
T smart00672 160 RLKYILACDSVVLKVKPEYYEFFSRGLQPWVHYW-PIKSDLSCRELKEAVDWGNEH-DKKAQEIGKRGSE 227 (256)
T ss_pred hHHHHHhcCceEEEeCCchhHHHHhcccCccceE-EeeCCCchhhHHHHHHHHHhC-HHHHHHHHHHHHH
Confidence 99999999999999887665445544 4566664 2322 23 66666666553 4444444444333
No 88
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=45.56 E-value=2.1e+02 Score=30.53 Aligned_cols=86 Identities=16% Similarity=0.215 Sum_probs=51.0
Q ss_pred CCeEEecCCCCCCcchhhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCC-ccCCCCCCCCCCceEEEEcCC
Q 006399 508 DDMKIFGPMPHDVEGKRIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDN-YVPPFFEVLNWEAFSVFVQEK 586 (647)
Q Consensus 508 ~dv~I~~~c~~~~~g~~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~-~~LPFsdVLDWs~fSV~Ipe~ 586 (647)
+.+.+.+..+ ..++...|..+.+++.+.|- -+.||+.+|| |||.... -..| +.+. ....+.++ .
T Consensus 255 ~~v~~~~~~~-----~~~~~~~l~~ad~vv~~Sg~-----~~~EA~a~g~-PvI~~~~~~~~~--e~~~-~g~~~lv~-~ 319 (365)
T TIGR00236 255 KRVHLIEPLE-----YLDFLNLAANSHLILTDSGG-----VQEEAPSLGK-PVLVLRDTTERP--ETVE-AGTNKLVG-T 319 (365)
T ss_pred CCEEEECCCC-----hHHHHHHHHhCCEEEECChh-----HHHHHHHcCC-CEEECCCCCCCh--HHHh-cCceEEeC-C
Confidence 4577776543 35788999999999888752 2799999997 6776532 2222 4444 34455554 4
Q ss_pred ChhhHHHHHcCC--CHHHHHHHHH
Q 006399 587 DIPNLRNILLSI--PEERYLAMQS 608 (647)
Q Consensus 587 dI~~L~~iL~sI--s~e~i~~Mr~ 608 (647)
+..+|.+.|..+ .++...+|.+
T Consensus 320 d~~~i~~ai~~ll~~~~~~~~~~~ 343 (365)
T TIGR00236 320 DKENITKAAKRLLTDPDEYKKMSN 343 (365)
T ss_pred CHHHHHHHHHHHHhChHHHHHhhh
Confidence 555554444332 3444444543
No 89
>PF00919 UPF0004: Uncharacterized protein family UPF0004; InterPro: IPR013848 The methylthiotransferase (MTTase) or miaB-like family is named after the (dimethylallyl)adenosine tRNA MTTase miaB protein, which catalyses a C-H to C-S bond conversion in the methylthiolation of tRNA. A related bacterial enzyme rimO performs a similar methylthiolation, but on a protein substrate. RimO acts on the ribosomal protein S12 and forms a separate MTTase subfamily. The miaB-subfamily includes mammalian CDK5 regulatory subunit-associated proteins and similar proteins in other eukaryotes. Two other subfamilies, yqeV and CDKAL1, are named after a Bacillus subtilis and a human protein, respectively. While yqeV-like proteins are found in bacteria, CDKAL1 subfamily members occur in eukaryotes and in archaebacteria. The likely MTTases from these 4 subfamilies contain an N-terminal MTTase domain, a central radical generating fold and a C-terminal TRAM domain (see PDOC50926 from PROSITEDOC). The core forms a radical SAM fold (or AdoMet radical), containing a cysteine motif CxxxCxxC that binds a [4Fe-4S] cluster [, , ]. A reducing equivalent from the [4Fe-4S]+ cluster is used to cleave S-adenosylmethionine (SAM) to generate methionine and a 5'-deoxyadenosyl radical. The latter is thought to produce a reactive substrate radical that is amenable to sulphur insertion [, ]. The N-terminal MTTase domain contains 3 cysteines that bind a second [4Fe-4S] cluster, in addition to the radical-generating [4Fe-4S] cluster, which could be involved in the thiolation reaction. The C-terminal TRAM domain is not shared with other radical SAM proteins outside the MTTase family. The TRAM domain can bind to RNA substrate and seems to be important for substrate recognition. The tertiary structure of the central radical SAM fold has six beta/alpha motifs resembling a three-quarter TIM barrel core (see PDOC00155 from PROSITEDOC) []. The N-terminal MTTase domain might form an additional [beta/alpha]2 TIM barrel unit []. ; GO: 0003824 catalytic activity, 0051539 4 iron, 4 sulfur cluster binding, 0009451 RNA modification
Probab=38.81 E-value=45 Score=30.03 Aligned_cols=42 Identities=29% Similarity=0.418 Sum_probs=26.9
Q ss_pred cEEEecCCCCCCcCCcccCcchhhHHHHHHHHhhCCccccCCCCCceEEEE
Q 006399 319 KVYIYKEGEKPIFHQPIMRGIYASEGWFMKLMEGNRKFVVRDPRKAHLFYL 369 (647)
Q Consensus 319 KVYVYp~~~~pi~h~~~~~~iYasE~~F~~~Le~sS~~rT~DPeEA~LFyV 369 (647)
|||+.-.| |-.++|-+|.+ ...|....--.|.+|++||++++
T Consensus 1 Kv~i~T~G--------C~~N~~Dse~i-~~~l~~~G~~~~~~~e~AD~iii 42 (98)
T PF00919_consen 1 KVYIETLG--------CQMNQYDSERI-ASILQAAGYEIVDDPEEADVIII 42 (98)
T ss_pred CEEEEECC--------CcccHHHHHHH-HHHHHhcCCeeecccccCCEEEE
Confidence 56666544 55566666653 33344222357999999999998
No 90
>PLN02501 digalactosyldiacylglycerol synthase
Probab=37.26 E-value=83 Score=38.24 Aligned_cols=38 Identities=18% Similarity=0.142 Sum_probs=30.0
Q ss_pred HHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCC
Q 006399 527 REHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDN 565 (647)
Q Consensus 527 ~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~ 565 (647)
.+.++.+...+.|.-.+....-+.|||++|| |||.+|.
T Consensus 613 ~~lyasaDVFVlPS~sEgFGlVlLEAMA~Gl-PVVATd~ 650 (794)
T PLN02501 613 DDSLHGYKVFINPSISDVLCTATAEALAMGK-FVVCADH 650 (794)
T ss_pred HHHHHhCCEEEECCCcccchHHHHHHHHcCC-CEEEecC
Confidence 3567777877778767666788999999997 8888775
No 91
>PLN02846 digalactosyldiacylglycerol synthase
Probab=32.74 E-value=1.1e+02 Score=35.07 Aligned_cols=38 Identities=13% Similarity=0.075 Sum_probs=30.6
Q ss_pred HhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCc
Q 006399 528 EHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNY 566 (647)
Q Consensus 528 e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~ 566 (647)
+.+..+..++.|.-.+....-+.|||++|+ |||..|.-
T Consensus 296 ~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~-PVVa~~~~ 333 (462)
T PLN02846 296 PLFHDYKVFLNPSTTDVVCTTTAEALAMGK-IVVCANHP 333 (462)
T ss_pred HHHHhCCEEEECCCcccchHHHHHHHHcCC-cEEEecCC
Confidence 577777888888777777788999999996 88887753
No 92
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=31.48 E-value=1.2e+02 Score=37.22 Aligned_cols=83 Identities=8% Similarity=-0.002 Sum_probs=54.6
Q ss_pred hhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEE----EEecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHc---
Q 006399 524 RIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVP----VIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILL--- 596 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIP----VIIsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~--- 596 (647)
..+..+++.+.-|++|+=++....-.+|||++|+ | +|+++--=- .+++ ..-++.|+..++..+-+.|.
T Consensus 367 ~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~-p~~gvlVlSe~~G~--~~~l--~~~allVnP~D~~~lA~AI~~aL 441 (797)
T PLN03063 367 NYLCALYAITDVMLVTSLRDGMNLVSYEFVACQK-AKKGVLVLSEFAGA--GQSL--GAGALLVNPWNITEVSSAIKEAL 441 (797)
T ss_pred HHHHHHHHhCCEEEeCccccccCcchhhHheeec-CCCCCEEeeCCcCc--hhhh--cCCeEEECCCCHHHHHHHHHHHH
Confidence 4567889999999999755444566999999998 5 777763211 1122 44689999888876655332
Q ss_pred CCCHHHHHHHHHHHH
Q 006399 597 SIPEERYLAMQSRVK 611 (647)
Q Consensus 597 sIs~e~i~~Mr~~l~ 611 (647)
.+++++..++.+++.
T Consensus 442 ~m~~~er~~r~~~~~ 456 (797)
T PLN03063 442 NMSDEERETRHRHNF 456 (797)
T ss_pred hCCHHHHHHHHHHHH
Confidence 356555554444333
No 93
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=29.58 E-value=1.2e+02 Score=31.85 Aligned_cols=33 Identities=21% Similarity=0.216 Sum_probs=27.1
Q ss_pred hhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEe
Q 006399 524 RIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVII 562 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVII 562 (647)
.+..+.|..|.+++++.|. + ++|++.+| +|+|+
T Consensus 233 ~~m~~lm~~aDl~Is~~G~--T---~~E~~a~g-~P~i~ 265 (279)
T TIGR03590 233 ENMAELMNEADLAIGAAGS--T---SWERCCLG-LPSLA 265 (279)
T ss_pred HHHHHHHHHCCEEEECCch--H---HHHHHHcC-CCEEE
Confidence 4567999999999998772 2 99999999 67765
No 94
>COG2247 LytB Putative cell wall-binding domain [Cell envelope biogenesis, outer membrane]
Probab=29.03 E-value=57 Score=35.79 Aligned_cols=43 Identities=21% Similarity=0.354 Sum_probs=35.1
Q ss_pred hhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccC
Q 006399 524 RIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVP 568 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~L 568 (647)
.+|+..+.+.|-|+|= |+.... .+.|+|.-|.|||++++...+
T Consensus 124 ~~yp~af~n~kvvvv~-GwDy~~-~~~e~~k~~~~p~~~~n~~~~ 166 (337)
T COG2247 124 EDYPNAFKNVKVVVVY-GWDYAD-ALMELMKEGIVPVILKNTSIL 166 (337)
T ss_pred hhchhhhcCeEEEEEe-ccccHH-HHHHHHhcCcceeEecccccc
Confidence 3588888999999985 766544 899999999999999987543
No 95
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=28.58 E-value=54 Score=35.01 Aligned_cols=85 Identities=18% Similarity=0.251 Sum_probs=48.2
Q ss_pred hHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCCCCCC----CCCCce------------E--EEEcCC
Q 006399 525 IYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEV----LNWEAF------------S--VFVQEK 586 (647)
Q Consensus 525 ~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsdV----LDWs~f------------S--V~Ipe~ 586 (647)
+..+.|+.|..++++.|. -.+||+.+|| |||+.... -||... +....+ . +..++.
T Consensus 254 ~~~~~~~~aDl~v~~sG~-----~~lEa~a~G~-PvI~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 326 (380)
T PRK00025 254 QKREAMAAADAALAASGT-----VTLELALLKV-PMVVGYKV-SPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEA 326 (380)
T ss_pred cHHHHHHhCCEEEECccH-----HHHHHHHhCC-CEEEEEcc-CHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCC
Confidence 357788999999998764 3569999997 67666443 233211 111111 1 112333
Q ss_pred ChhhHHHHHcCC--CHHHHHHHHHHHHhhhhe
Q 006399 587 DIPNLRNILLSI--PEERYLAMQSRVKMVQKH 616 (647)
Q Consensus 587 dI~~L~~iL~sI--s~e~i~~Mr~~l~~vq~~ 616 (647)
+..+|.+.+..+ .++...+|.++...+.+.
T Consensus 327 ~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~ 358 (380)
T PRK00025 327 TPEKLARALLPLLADGARRQALLEGFTELHQQ 358 (380)
T ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 344454444433 467777888877666554
No 96
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=25.11 E-value=1.4e+02 Score=31.02 Aligned_cols=112 Identities=19% Similarity=0.318 Sum_probs=63.9
Q ss_pred CCCceEEEEeeccCCcchHHHHHHhhcCC-CCeEEecCCCC----CC---c--chhhHHHhhccceEEEEecCCCCCCch
Q 006399 479 LKRSTLAFFAGRMHGYLRPILLNFWENKV-DDMKIFGPMPH----DV---E--GKRIYREHMKSSKYCICARGYEVHTPR 548 (647)
Q Consensus 479 ~~R~~LafFaG~~~G~iR~~L~~~w~n~~-~dv~I~~~c~~----~~---~--g~~~Y~e~m~~SkFCL~P~G~~~~S~R 548 (647)
..+.+|++|-|.-.+ .+.+.++.-+ ..+.+++.-.. .+ . ...++.+.|..|..+++-.|++ -
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~~~~~~~v~g~~~~~~~~~ni~~~~~~~~~~~~~m~~ad~vIs~~G~~----t 262 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKALPDYQFIVFGPNAADPRPGNIHVRPFSTPDFAELMAAADLVISKGGYT----T 262 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhCCCCeEEEEcCCcccccCCCEEEeecChHHHHHHHHhCCEEEECCCHH----H
Confidence 355678888775444 3334443322 35556543210 00 1 1257889999999999999986 2
Q ss_pred HHHHhhcCcEEEEecCC---ccCCC-CCCCCCCceEEEEcCCCh--hhHHHHHcCCC
Q 006399 549 VVEAIFYECVPVIISDN---YVPPF-FEVLNWEAFSVFVQEKDI--PNLRNILLSIP 599 (647)
Q Consensus 549 l~EAL~aGCIPVIIsD~---~~LPF-sdVLDWs~fSV~Ipe~dI--~~L~~iL~sIs 599 (647)
+.||+.+|+ |+|+-+. .+..+ ...+.=..+.+.++..++ .+|.+.|+.+|
T Consensus 263 ~~Ea~~~g~-P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~~~l~~~~ 318 (318)
T PF13528_consen 263 ISEALALGK-PALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLAEFLERLP 318 (318)
T ss_pred HHHHHHcCC-CEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHHHHHhcCC
Confidence 889998885 6655332 11111 011333455566655554 46777776654
No 97
>PF07038 DUF1324: Protein of unknown function (DUF1324); InterPro: IPR009757 This family consists of several Circovirus proteins of around 60 residues in length. The function of this family is unknown.
Probab=23.35 E-value=59 Score=26.15 Aligned_cols=40 Identities=18% Similarity=0.370 Sum_probs=29.1
Q ss_pred hccceEEEEecCC-CCCCchHHHHhhcCcEEEEecCCccCCCCC
Q 006399 530 MKSSKYCICARGY-EVHTPRVVEAIFYECVPVIISDNYVPPFFE 572 (647)
Q Consensus 530 m~~SkFCL~P~G~-~~~S~Rl~EAL~aGCIPVIIsD~~~LPFsd 572 (647)
.-+|+||+.|--+ +..|+|-|-.-..||--.-+ -.||.+.
T Consensus 6 vfqsrfcifpltfkssasprkfltnvtgccsatv---trlplsn 46 (59)
T PF07038_consen 6 VFQSRFCIFPLTFKSSASPRKFLTNVTGCCSATV---TRLPLSN 46 (59)
T ss_pred EEeeeeEEEEeeeccCCChHHHhhcccceeeeeE---Eeccchh
Confidence 3479999999776 44689999888999976544 2466553
No 98
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=20.61 E-value=2.4e+02 Score=32.67 Aligned_cols=101 Identities=16% Similarity=0.181 Sum_probs=62.7
Q ss_pred hhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCC----ccCCCCCCC-CCCceEEEEcCCChhhHHHHHc--
Q 006399 524 RIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDN----YVPPFFEVL-NWEAFSVFVQEKDIPNLRNILL-- 596 (647)
Q Consensus 524 ~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~----~~LPFsdVL-DWs~fSV~Ipe~dI~~L~~iL~-- 596 (647)
.-+......|.+=|+|.=+++-.---+.||++|||||+-.-+ .+.|+.+.+ .=..--+.+.+.+...+...|+
T Consensus 360 ~la~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA 439 (487)
T COG0297 360 PLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRA 439 (487)
T ss_pred HHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHH
Confidence 456788899999999998888888889999999999987653 344443211 0023334444445554443332
Q ss_pred ----CCCHHHHHHHHHHHHhhhheeEeccCCCCc
Q 006399 597 ----SIPEERYLAMQSRVKMVQKHFLWHKKPKKY 626 (647)
Q Consensus 597 ----sIs~e~i~~Mr~~l~~vq~~Flw~~~p~~~ 626 (647)
..++.....+|++-. ...|.|+.....|
T Consensus 440 ~~~y~~~~~~w~~~~~~~m--~~d~sw~~sa~~y 471 (487)
T COG0297 440 LVLYRAPPLLWRKVQPNAM--GADFSWDLSAKEY 471 (487)
T ss_pred HHHhhCCHHHHHHHHHhhc--ccccCchhHHHHH
Confidence 223333455555322 3678888776555
Done!